BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014507
(423 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224130012|ref|XP_002320730.1| predicted protein [Populus trichocarpa]
gi|222861503|gb|EEE99045.1| predicted protein [Populus trichocarpa]
Length = 407
Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust.
Identities = 249/409 (60%), Positives = 313/409 (76%), Gaps = 6/409 (1%)
Query: 1 MAPCDCNMLPRSYSAYQVFDEITAPKPGLRLSWRNLSLHRKPAKWSRSLRSG--PALEAI 58
MA N+LP S + E PK L + SL ++P + S +S P L AI
Sbjct: 1 MATYVINILPFSSPTCPLHSE---PKKTSNLHFLGNSLCQQPVTLT-SCKSQIQPVLAAI 56
Query: 59 KAEDMGKTQVKDDTSMFTWIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETG 118
E+ + ++ + F W++IGPNI EEQKQAISQ P KMTKRCKA ++QIIC + + G
Sbjct: 57 NVEEKVEGEIGKEKPKFRWVEIGPNIPEEQKQAISQLPFKMTKRCKALMRQIICFNDKKG 116
Query: 119 NLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIH 178
+L LL+AWV+ MKPRR DWL++LK+L MEHPLYL+V E+ALLEESFEAN+RDYTKIIH
Sbjct: 117 SLRGLLSAWVKIMKPRRKDWLSILKELNKMEHPLYLEVVEIALLEESFEANVRDYTKIIH 176
Query: 179 GYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPL 238
YG Q++ AE T LAM+ RGF+ DQVTLT M+ MYSK GNL +AEETFEE+KLLG+PL
Sbjct: 177 FYGMNNQLEEAERTRLAMEERGFVSDQVTLTAMIHMYSKGGNLTLAEETFEELKLLGQPL 236
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
D+RSYGSM+MAY+RAGM ++GE++LREMDAQE+ GSEVYKALLR YS+ G+++GAQRVF
Sbjct: 237 DRRSYGSMIMAYIRAGMPEKGEMILREMDAQEIRAGSEVYKALLRAYSIIGDADGAQRVF 296
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
+AIQ AGI PD R CA+L+NAY MAGQSQ AY F+NM +AG+EP+D+CVAL+L+A EKE
Sbjct: 297 DAIQLAGIPPDDRTCAVLLNAYGMAGQSQNAYATFENMWRAGIEPTDRCVALVLAAYEKE 356
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYG 407
N+LN+AL+FLI LER+ ++GKEAS LA WF RLGVV+EVE VLREY
Sbjct: 357 NKLNQALDFLIGLEREKLIIGKEASEVLAEWFGRLGVVKEVELVLREYA 405
>gi|225453925|ref|XP_002273719.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g01970-like [Vitis vinifera]
Length = 352
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 247/344 (71%), Positives = 301/344 (87%)
Query: 75 FTWIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRFMKPR 134
+ WI+IGPNITE QK ISQ KMTKRCKA VKQIIC SPE +LSDLLAAWV+ MKPR
Sbjct: 9 YKWIEIGPNITEAQKMTISQISLKMTKRCKALVKQIICFSPEERSLSDLLAAWVKIMKPR 68
Query: 135 RADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLL 194
RADWL+VLK+L ++HPL L+VAELALLEESFEANIRDYTKII GYGK+ ++Q+AENTL
Sbjct: 69 RADWLSVLKELGRLDHPLLLEVAELALLEESFEANIRDYTKIIDGYGKQNRLQDAENTLS 128
Query: 195 AMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG 254
AMKRRGFICDQVTLT M+ MYSKAGNL++AE+TFEEIKLLG PLDKRSYGSM+MAY+RAG
Sbjct: 129 AMKRRGFICDQVTLTAMINMYSKAGNLELAEKTFEEIKLLGHPLDKRSYGSMIMAYIRAG 188
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
M D+GE+L++EM+A+E+Y G EVYKALLR YS ++EGAQRVF+AIQFAGI+PD ++CA
Sbjct: 189 MPDQGEILVKEMEAKEIYAGREVYKALLRAYSNTSDAEGAQRVFDAIQFAGISPDVKLCA 248
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
LLINAY++AGQ+QKA+ AF+NMR++GL+P+DK +AL+L+A EKEN+LN+AL+FLIDLERD
Sbjct: 249 LLINAYRVAGQTQKAHVAFENMRRSGLKPNDKSIALMLAAYEKENKLNKALDFLIDLERD 308
Query: 375 GFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRETYSKIPGS 418
G ++GKEAS LAAWF+RLGVV+EVE VLREY +E ++ S
Sbjct: 309 GIVLGKEASELLAAWFQRLGVVKEVELVLREYSAKEASCEVHPS 352
>gi|296089159|emb|CBI38862.3| unnamed protein product [Vitis vinifera]
Length = 353
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 246/337 (72%), Positives = 298/337 (88%)
Query: 75 FTWIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRFMKPR 134
+ WI+IGPNITE QK ISQ KMTKRCKA VKQIIC SPE +LSDLLAAWV+ MKPR
Sbjct: 9 YKWIEIGPNITEAQKMTISQISLKMTKRCKALVKQIICFSPEERSLSDLLAAWVKIMKPR 68
Query: 135 RADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLL 194
RADWL+VLK+L ++HPL L+VAELALLEESFEANIRDYTKII GYGK+ ++Q+AENTL
Sbjct: 69 RADWLSVLKELGRLDHPLLLEVAELALLEESFEANIRDYTKIIDGYGKQNRLQDAENTLS 128
Query: 195 AMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG 254
AMKRRGFICDQVTLT M+ MYSKAGNL++AE+TFEEIKLLG PLDKRSYGSM+MAY+RAG
Sbjct: 129 AMKRRGFICDQVTLTAMINMYSKAGNLELAEKTFEEIKLLGHPLDKRSYGSMIMAYIRAG 188
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
M D+GE+L++EM+A+E+Y G EVYKALLR YS ++EGAQRVF+AIQFAGI+PD ++CA
Sbjct: 189 MPDQGEILVKEMEAKEIYAGREVYKALLRAYSNTSDAEGAQRVFDAIQFAGISPDVKLCA 248
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
LLINAY++AGQ+QKA+ AF+NMR++GL+P+DK +AL+L+A EKEN+LN+AL+FLIDLERD
Sbjct: 249 LLINAYRVAGQTQKAHVAFENMRRSGLKPNDKSIALMLAAYEKENKLNKALDFLIDLERD 308
Query: 375 GFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRET 411
G ++GKEAS LAAWF+RLGVV+EVE VLREY +E
Sbjct: 309 GIVLGKEASELLAAWFQRLGVVKEVELVLREYSAKEA 345
>gi|388518405|gb|AFK47264.1| unknown [Lotus japonicus]
Length = 414
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 251/409 (61%), Positives = 308/409 (75%), Gaps = 6/409 (1%)
Query: 1 MAPCDCNMLPR-SYSAYQVFDEITAPKPGLRLSWRNLSLHRKPAKWS-RSLRSGPALEAI 58
M C N+L Y Y + + IT R+ R SL++KP+ R AL I
Sbjct: 2 MGTCCYNLLSNLYYPPYLITNSIT---KFCRVQTRGNSLYQKPSNLDLHRHRFDSALVGI 58
Query: 59 KAEDMGKTQVKDDTSM-FTWIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPET 117
E++ K +VKD+ F W +IG NIT EQ +AIS+ P KMTKRCKA ++QIIC S E
Sbjct: 59 GMEEIVKEEVKDENHRRFRWTEIGHNITHEQNEAISKLPFKMTKRCKALMRQIICFSAEK 118
Query: 118 GNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKII 177
GN+SDLL AWV+ MKP RA+WL+VLK+L+ MEHPLYL+VAE ALLEESFE NIRDYT II
Sbjct: 119 GNVSDLLNAWVKIMKPIRAEWLSVLKELETMEHPLYLEVAEHALLEESFEVNIRDYTNII 178
Query: 178 HGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEP 237
H GK Q++ AEN L AMK+RGFICDQV LT MV +YSKAG+L AEE FEEI+LLGEP
Sbjct: 179 HYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEP 238
Query: 238 LDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRV 297
LDKRSYGSM+ AY+RAGM +RGE LL EMDA+E+Y GSEVYKALLR YS GN+EGAQRV
Sbjct: 239 LDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRV 298
Query: 298 FEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEK 357
F+AIQ AGI PD ++C L+ AY MAGQS+KA AF+NM++AG+EP+D+C+ +L A EK
Sbjct: 299 FDAIQLAGIIPDDKICGLVTKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEK 358
Query: 358 ENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREY 406
E++LN ALEFLIDLE++G MVG+EAS LA WF++LGVVEEVE VLR++
Sbjct: 359 ESKLNTALEFLIDLEKEGIMVGEEASAILAGWFRKLGVVEEVELVLRDF 407
>gi|449433119|ref|XP_004134345.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g01970-like [Cucumis sativus]
gi|449480346|ref|XP_004155867.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g01970-like [Cucumis sativus]
Length = 404
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 233/351 (66%), Positives = 287/351 (81%)
Query: 61 EDMGKTQVKDDTSMFTWIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETGNL 120
+++ K + + + F W+++G +ITE QKQAISQ P KMTKRCKA +KQIIC SP+ G L
Sbjct: 52 DEIHKLESEREKPRFRWVEVGYDITETQKQAISQLPPKMTKRCKAVMKQIICFSPQKGEL 111
Query: 121 SDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGY 180
SD+LAAWVR MKP RADWL VLK L+++ HPLY+QVAE AL E +FEAN RDYTKIIH Y
Sbjct: 112 SDMLAAWVRIMKPERADWLLVLKHLRILNHPLYIQVAEAALEEITFEANTRDYTKIIHHY 171
Query: 181 GKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDK 240
GK+ Q+++AE LL+M+ RGF+CDQ+TLT M+ +YSKA L +A++TFEE+KLL +PLDK
Sbjct: 172 GKQNQLEDAEKVLLSMRERGFVCDQITLTTMIHIYSKADKLNLAKQTFEELKLLEQPLDK 231
Query: 241 RSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEA 300
RS+G+M+MAYVRAG + GE +L+EMDA+++Y GSEVYKALLR YSM GN+EGAQRVF+A
Sbjct: 232 RSFGAMIMAYVRAGFPEEGEKILKEMDAKDIYAGSEVYKALLRAYSMVGNAEGAQRVFDA 291
Query: 301 IQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQ 360
IQ A ITPD ++C LLINAY MAGQS++A AF NMR+AG+EPSDKC+AL LSA EKEN+
Sbjct: 292 IQLAAITPDEKLCGLLINAYLMAGQSREAQIAFDNMRRAGIEPSDKCIALALSAYEKENR 351
Query: 361 LNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRET 411
LN ALE LIDLE+D MVGKEAS LAAW KRLGVVEEVE VLREY +E
Sbjct: 352 LNSALELLIDLEKDNVMVGKEASKILAAWLKRLGVVEEVEIVLREYTEKEV 402
>gi|357506869|ref|XP_003623723.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498738|gb|AES79941.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 426
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 228/338 (67%), Positives = 275/338 (81%)
Query: 75 FTWIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRFMKPR 134
F W +I +ITEEQKQAI++ P +M KRCKA ++QIIC S E G L D+L AWV MKP
Sbjct: 86 FRWNEIRNDITEEQKQAIAKLPFRMEKRCKAVMRQIICFSEEKGRLCDVLRAWVEIMKPT 145
Query: 135 RADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLL 194
RADWL+VLK+LK M+HPLYL+VAE AL+EESFE N+RDYTK+IH Y K+ Q++ AEN
Sbjct: 146 RADWLSVLKELKNMDHPLYLEVAEHALVEESFEPNLRDYTKLIHYYSKENQLEAAENIFT 205
Query: 195 AMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG 254
MK+RGFICDQV LT MV MYSKAG+L AEE FEEIKLLGEPLDKRSYGSM+MAY+RAG
Sbjct: 206 LMKQRGFICDQVILTTMVHMYSKAGHLDRAEEYFEEIKLLGEPLDKRSYGSMIMAYIRAG 265
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
M ++GE LL EMDAQ++Y GSEVYKALLR YS+ GN+EGAQRVF+AIQ AGI PD +MC+
Sbjct: 266 MPEKGESLLEEMDAQDIYAGSEVYKALLRAYSVIGNAEGAQRVFDAIQLAGIIPDDKMCS 325
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
LLI AY MAGQSQKA AF+NM++AG+EP+DKC++ +L A EKEN LN ALEFLI+LERD
Sbjct: 326 LLIYAYSMAGQSQKARIAFENMKRAGIEPTDKCISSVLVAYEKENMLNTALEFLIELERD 385
Query: 375 GFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRETY 412
G MV +E S LA WF++LGVVEEVE VLR++ ++
Sbjct: 386 GIMVKEETSRILAGWFRKLGVVEEVELVLRDFATTTSH 423
>gi|356530135|ref|XP_003533639.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g01970-like [Glycine max]
Length = 356
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 226/352 (64%), Positives = 283/352 (80%), Gaps = 1/352 (0%)
Query: 61 EDMGKTQVKD-DTSMFTWIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETGN 119
E + K +VK+ + + WI++G N+T+EQ+QAIS+ P +M R KA ++QIIC S E G
Sbjct: 2 EQIVKEEVKEGNERRYRWIEVGKNVTKEQQQAISKLPFRMADRSKALMRQIICFSAEKGT 61
Query: 120 LSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHG 179
+SDLL +WV+ MKP RADWL+VLK+L+ EHP YL+VA+ LLEESFE NIRDYTKIIH
Sbjct: 62 ISDLLRSWVKLMKPTRADWLSVLKELRTTEHPFYLEVAKHTLLEESFEVNIRDYTKIIHY 121
Query: 180 YGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLD 239
YG+ +++AE L MK+RGFI DQV LT MV M SKAGN A+E FEEIKLLGEPLD
Sbjct: 122 YGEHNLLEDAEKFLTLMKQRGFIYDQVILTTMVHMSSKAGNHDRAKEYFEEIKLLGEPLD 181
Query: 240 KRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFE 299
KRSYGSM+MAY+RAGM + GE LL++M+AQE+ GSE+YKALLR YSM GN+EGAQRVF+
Sbjct: 182 KRSYGSMIMAYIRAGMPEEGENLLQQMEAQEILAGSEIYKALLRAYSMIGNAEGAQRVFD 241
Query: 300 AIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKEN 359
AIQ AGITPD ++C+LL+NAY MAGQSQKA AF+NMR+AG++PSDKC+A +L A EKE+
Sbjct: 242 AIQLAGITPDDKICSLLVNAYAMAGQSQKALIAFENMRRAGIKPSDKCIASVLVAYEKES 301
Query: 360 QLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRET 411
++N ALEFLIDLERDG MVG+EAS LA WF++LGVVEEVE VLR++ + E
Sbjct: 302 KINTALEFLIDLERDGIMVGEEASAVLAKWFRKLGVVEEVELVLRDFAIIEV 353
>gi|356568284|ref|XP_003552343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g01970-like [Glycine max]
Length = 414
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 223/337 (66%), Positives = 279/337 (82%)
Query: 70 DDTSMFTWIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVR 129
D+ + WI++G N+ +EQ+QAIS+ P +M RCKA ++QIIC S E G++SDLL +WV+
Sbjct: 71 DNDRRYRWIEVGKNVPKEQQQAISKLPFRMADRCKALMRQIICYSAEKGSMSDLLRSWVK 130
Query: 130 FMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNA 189
MKP RADWL+VLK+LK+ EHP+YL+VA+ AL+EESFE NIRDYTKIIH YG+ +++A
Sbjct: 131 LMKPTRADWLSVLKELKIREHPVYLEVAKHALMEESFEVNIRDYTKIIHYYGEHNLLEDA 190
Query: 190 ENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMA 249
E L MK+RGFI DQV LT MV MYSKAGN A+E FEEIKLLG+PLDKRSYGSM+MA
Sbjct: 191 EKFLTLMKQRGFIYDQVILTTMVHMYSKAGNHDRAKEYFEEIKLLGKPLDKRSYGSMIMA 250
Query: 250 YVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPD 309
Y+RAGM + GE LL+EM+AQE+ GSEVYKALLR YSM GN+EGAQRVF+AIQ AGITPD
Sbjct: 251 YIRAGMPEEGENLLQEMEAQEILAGSEVYKALLRAYSMIGNAEGAQRVFDAIQLAGITPD 310
Query: 310 ARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLI 369
++C+L++NAY MAGQSQKA AF+NMR+AG++PSDKC+A +L A EKE+++N ALEFLI
Sbjct: 311 DKICSLVVNAYVMAGQSQKALIAFENMRRAGIKPSDKCIASVLVAYEKESKINTALEFLI 370
Query: 370 DLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREY 406
DLERDG MV +EAS LA WF++LGVVEEVE VLR++
Sbjct: 371 DLERDGIMVEEEASAVLAKWFRKLGVVEEVELVLRDF 407
>gi|15217583|ref|NP_171699.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75264110|sp|Q9LPC4.1|PPR1_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g01970
gi|8570448|gb|AAF76475.1|AC020622_9 Contains similarity to an unknown protein gi|AAD26479 from
Arabidopsis thaliana BAC gb|AC007169 and contains
multiple PPR PF|01535 repeats [Arabidopsis thaliana]
gi|34098825|gb|AAQ56795.1| At1g01970 [Arabidopsis thaliana]
gi|110735700|dbj|BAE99830.1| hypothetical protein [Arabidopsis thaliana]
gi|332189240|gb|AEE27361.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 409
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 219/347 (63%), Positives = 281/347 (80%), Gaps = 3/347 (0%)
Query: 63 MGKTQVKDD---TSMFTWIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETGN 119
+G+ K+D + F W +G N+TEEQ +AI++ P KM+KRC+A ++QIIC SPE G+
Sbjct: 55 IGEVVEKEDAEQSRSFNWADVGLNLTEEQDEAITRIPIKMSKRCQALMRQIICFSPEKGS 114
Query: 120 LSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHG 179
DLL AW+R M P RADWL++LK+LK ++ P Y++VAE +LL++SFEAN RDYTKIIH
Sbjct: 115 FCDLLGAWLRRMNPIRADWLSILKELKNLDSPFYIKVAEFSLLQDSFEANARDYTKIIHY 174
Query: 180 YGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLD 239
YGK Q+++AE TLL+MK RGF+ DQVTLT MV +YSKAG K+AEETF EIKLLGEPLD
Sbjct: 175 YGKLNQVEDAERTLLSMKNRGFLIDQVTLTAMVQLYSKAGCHKLAEETFNEIKLLGEPLD 234
Query: 240 KRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFE 299
RSYGSM+MAY+RAG+ ++GE LLREMD+QE+ G EVYKALLR YSM G++EGA+RVF+
Sbjct: 235 YRSYGSMIMAYIRAGVPEKGESLLREMDSQEICAGREVYKALLRDYSMGGDAEGAKRVFD 294
Query: 300 AIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKEN 359
A+Q AGITPD ++C LLINAY ++GQSQ A AF+NMRKAG++ +DKCVAL+L+A EKE
Sbjct: 295 AVQIAGITPDVKLCGLLINAYSVSGQSQNARLAFENMRKAGIKATDKCVALVLAAYEKEE 354
Query: 360 QLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREY 406
+LN AL FL++LE+D M+GKEAS LA WFK+LGVVEEVE +LRE+
Sbjct: 355 KLNEALGFLVELEKDSIMLGKEASAVLAQWFKKLGVVEEVELLLREF 401
>gi|297848306|ref|XP_002892034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337876|gb|EFH68293.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 409
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 218/347 (62%), Positives = 279/347 (80%), Gaps = 3/347 (0%)
Query: 63 MGKTQVKDDTSMF---TWIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETGN 119
+G+ K+DT W+ +G ++TEEQ +AI++ P KM+KRC+A ++QIIC S E G+
Sbjct: 55 IGEVVEKEDTEQIPRSNWVDVGLDLTEEQDEAITRIPIKMSKRCQALMRQIICFSSEKGS 114
Query: 120 LSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHG 179
DLL AWVR M P RADWL++LK+LK ++ P Y++VAE +LLE+SFEAN RDYTKIIH
Sbjct: 115 FCDLLGAWVRRMNPIRADWLSILKELKNLDSPFYIKVAEFSLLEDSFEANARDYTKIIHY 174
Query: 180 YGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLD 239
YGK Q+++AE TLL+MK RGF+ DQVTLT +V +YSKAG K+AEETF EIKL+GEPLD
Sbjct: 175 YGKLNQVEDAERTLLSMKNRGFLIDQVTLTAIVQLYSKAGYHKLAEETFNEIKLIGEPLD 234
Query: 240 KRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFE 299
RSYGSM+MAY+RAG ++GE LLREMD+QE+ G EVYKALLR YSM G++EGA+RVF+
Sbjct: 235 NRSYGSMIMAYIRAGAPEKGEALLREMDSQEICAGREVYKALLRAYSMGGDAEGAKRVFD 294
Query: 300 AIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKEN 359
A+Q AGITPD ++C LLINAY ++GQSQ A AF+NMRKAG++ +DKCVAL+L+A EKE
Sbjct: 295 AVQIAGITPDVKLCGLLINAYSVSGQSQNARLAFENMRKAGIKATDKCVALVLAAYEKEE 354
Query: 360 QLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREY 406
+LN AL FL++LE+D MVGKEAS LA WFK+LGVVEEVE +LRE+
Sbjct: 355 KLNEALGFLVELEKDSIMVGKEASAVLAQWFKKLGVVEEVELLLREF 401
>gi|212276115|ref|NP_001130199.1| hypothetical protein [Zea mays]
gi|194688524|gb|ACF78346.1| unknown [Zea mays]
gi|194705182|gb|ACF86675.1| unknown [Zea mays]
gi|414887996|tpg|DAA64010.1| TPA: hypothetical protein ZEAMMB73_315638 [Zea mays]
Length = 413
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/340 (55%), Positives = 246/340 (72%)
Query: 75 FTWIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRFMKPR 134
F W G ++T Q++A+ K+ RCKA V +++C+SP L LLA WV+ MKP+
Sbjct: 64 FRWDAFGSDLTGPQQRAVRVLSPKLPNRCKALVARVVCLSPGDERLGALLAYWVKAMKPK 123
Query: 135 RADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLL 194
RADWL VLK+LK ME PL +V E ALLE SFEAN+RDYTK+IH YGK+ ++Q AE+
Sbjct: 124 RADWLLVLKELKAMESPLLAEVLEHALLENSFEANVRDYTKLIHIYGKQKRLQKAEDAFA 183
Query: 195 AMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG 254
AMK RGF CDQV LT ++ M+SKAG+L A+E F EI LLG PLDKR+YGSMVMAYVRA
Sbjct: 184 AMKGRGFPCDQVMLTALMDMHSKAGDLARAKEIFGEIVLLGLPLDKRAYGSMVMAYVRAD 243
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
ML E L++E + Q+V+ G EVYKALLR YS G+ +GAQRVF+A+QFAGI PD ++CA
Sbjct: 244 MLPEAEDLIKETEEQQVFAGKEVYKALLRAYSYRGDPDGAQRVFDAVQFAGIVPDTKLCA 303
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
LL+NAY ++ + ++A +NMR AG+EP DKCVAL+L ACEK N L AL FL +LE +
Sbjct: 304 LLVNAYCLSDRIEEAVCVIRNMRSAGVEPCDKCVALVLGACEKVNMLETALGFLTELEEN 363
Query: 375 GFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRETYSK 414
G +G+E S LAAWF++LGVV EV+ VL++ + S+
Sbjct: 364 GVSIGQEPSQLLAAWFRKLGVVREVDQVLKDLSSEDMTSR 403
>gi|242051194|ref|XP_002463341.1| hypothetical protein SORBIDRAFT_02g042040 [Sorghum bicolor]
gi|241926718|gb|EER99862.1| hypothetical protein SORBIDRAFT_02g042040 [Sorghum bicolor]
Length = 405
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/340 (55%), Positives = 245/340 (72%)
Query: 75 FTWIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRFMKPR 134
F W G ++E Q++A+ K+ RCKA V +++C+ P +L LLA WV+ MKP+
Sbjct: 57 FRWDAFGSEMSESQQRAVRGLSPKLPNRCKALVARVVCLCPGDESLGALLAYWVKAMKPK 116
Query: 135 RADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLL 194
RADWL VLK+LK ME PL +V + ALLE SFEAN+RDYTK+IH YGK+ +Q AE+
Sbjct: 117 RADWLLVLKELKAMESPLLAEVLQHALLENSFEANVRDYTKLIHIYGKQKLLQKAEDAFA 176
Query: 195 AMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG 254
AMK RGF CDQV LT ++ MYSKAG+L A+E F EI LLG PLDKR+YGSM+MAY+RA
Sbjct: 177 AMKGRGFPCDQVMLTALMDMYSKAGDLTRAKEIFREIVLLGLPLDKRAYGSMIMAYIRAD 236
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
ML E L++EM+ Q+++ G EVYKALLR YS G+S+GAQR+F+AIQFAGI PD ++CA
Sbjct: 237 MLQEAEGLIKEMEDQQMFAGKEVYKALLRAYSYRGDSDGAQRIFDAIQFAGIVPDTKLCA 296
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
LL+NAY ++ + +A +NMR AG++P DKC+AL+L A EK N L ALEFL +LE
Sbjct: 297 LLVNAYCLSNRIDEAVCVIRNMRCAGVKPCDKCIALVLGAYEKVNMLETALEFLTELEEK 356
Query: 375 GFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRETYSK 414
G +G+E S LAAWF++LGVV EVE VL++ + SK
Sbjct: 357 GVSIGQEPSQLLAAWFRKLGVVHEVEQVLKDLSSEDMTSK 396
>gi|195619830|gb|ACG31745.1| hypothetical protein [Zea mays]
Length = 413
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/340 (54%), Positives = 244/340 (71%)
Query: 75 FTWIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRFMKPR 134
F W G ++T ++A K+ RCKA V +++C+SP L LLA WV+ MKP+
Sbjct: 64 FRWDAFGSDLTGPHQRAFRGLSPKLPNRCKALVARVVCLSPGDERLGALLAYWVKAMKPK 123
Query: 135 RADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLL 194
RADWL VLK+LK ME PL +V E ALLE SFEAN+RDYTK+IH YGK+ ++Q AE+
Sbjct: 124 RADWLLVLKELKAMESPLLAEVLEHALLENSFEANVRDYTKLIHIYGKQKRLQKAEDAFA 183
Query: 195 AMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG 254
AMK RGF CDQV LT ++ M+SKAG+L A+E F EI LLG PLDKR+YG+MVMAY+RA
Sbjct: 184 AMKGRGFPCDQVMLTALMDMHSKAGDLARAKEIFGEIVLLGLPLDKRAYGAMVMAYIRAD 243
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
ML E L++E + Q+V+ G EVYKALLR YS G+ +GAQRVF+A+QFAGI PD ++CA
Sbjct: 244 MLPEAEDLIKETEEQQVFAGKEVYKALLRAYSYRGDPDGAQRVFDAVQFAGIVPDTKLCA 303
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
LL+NAY ++ + ++A +NMR AG+EP DKCVAL+L ACEK N L AL FL +LE +
Sbjct: 304 LLVNAYCLSDRIEEAVCVIRNMRSAGVEPCDKCVALVLGACEKVNMLETALGFLTELEEN 363
Query: 375 GFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRETYSK 414
G +G+E S LAAWF++LGVV EV+ VL++ + S+
Sbjct: 364 GVSIGQEPSLLLAAWFRKLGVVREVDQVLKDLSSEDMTSR 403
>gi|326495326|dbj|BAJ85759.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 454
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 183/331 (55%), Positives = 242/331 (73%)
Query: 75 FTWIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRFMKPR 134
F W ++G +++ Q+QA+ K+ RC+A + +++ +SP NL +LA WV+ MKP+
Sbjct: 57 FRWDELGTGLSDPQEQAMRGLSPKLPNRCRALMPRVVSLSPGDENLGVVLAFWVKAMKPK 116
Query: 135 RADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLL 194
RADWL VLK+L ME PL +V E LLE+SFEAN+RDYTK+I YGK+ ++ AE
Sbjct: 117 RADWLLVLKELMAMESPLLAEVLEYVLLEDSFEANVRDYTKLIQIYGKQNLLREAEEAFH 176
Query: 195 AMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG 254
AMK RG CDQV LT +V MYSKAG+L A+ETF+EI LLG PLDKR+YGSM+MAY+RA
Sbjct: 177 AMKARGLPCDQVMLTALVDMYSKAGDLTRAKETFKEIVLLGLPLDKRAYGSMIMAYIRAD 236
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
MLD+ + L+++ + Q+V+ G EVYKALLR YS G+SEGAQRVF+A+QFAG PD ++CA
Sbjct: 237 MLDQADDLIKQTEDQQVFAGKEVYKALLRAYSYRGDSEGAQRVFDAVQFAGTVPDTKLCA 296
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
LL+NAY ++ + +A +NMR AGLEP D+CVALIL A E ++L ALEFL +LE +
Sbjct: 297 LLVNAYCLSNRIDEAVCVTRNMRSAGLEPCDRCVALILGAYENADRLEGALEFLAELEEN 356
Query: 375 GFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
G ++G+E S LAAWF RLGVV EVE VL E
Sbjct: 357 GVVIGQEPSQLLAAWFGRLGVVHEVEQVLEE 387
>gi|357121606|ref|XP_003562509.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g01970-like [Brachypodium distachyon]
Length = 440
Score = 367 bits (943), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 176/330 (53%), Positives = 235/330 (71%)
Query: 75 FTWIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRFMKPR 134
F W +G +++E Q++AI K+ RC+A + +I+ +SP NL LA W + M PR
Sbjct: 59 FRWNGLGSDLSEPQEEAIRGLSPKLPNRCRALMPRIVSLSPGDENLGMALAFWAKAMNPR 118
Query: 135 RADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLL 194
R DWL VLK+LK ++ L +V E ALLE+SFEAN+RDYTK++ YGK+ Q+Q AE
Sbjct: 119 RVDWLLVLKELKAVDSTLLAEVLEYALLEDSFEANVRDYTKLVQIYGKQNQLQEAEKAFR 178
Query: 195 AMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG 254
AMK RG CDQ+ LT +V MYSKAG+L A+E FE+I +LG PLDKR+YGSM+MAY+RA
Sbjct: 179 AMKARGLPCDQIMLTALVDMYSKAGDLTRAKEAFEDIVMLGLPLDKRAYGSMIMAYIRAD 238
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
L + E L+++ + QE++ G EVYKALLR YS G+S+GAQRVF+A+QFAG PD ++CA
Sbjct: 239 KLGQAEDLIKQTEDQEIFAGKEVYKALLRAYSYKGDSDGAQRVFDAVQFAGTAPDTKLCA 298
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
LL+NAY ++ + +A NMR AGLEP D+CV LIL A EK N+L ALEFL ++E +
Sbjct: 299 LLVNAYCLSNKIDEAICVTGNMRSAGLEPCDRCVVLILGAYEKANRLEGALEFLAEIEEN 358
Query: 375 GFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
G ++G+E S LA WF RLGVV EVE VL+
Sbjct: 359 GAVIGQEPSQLLAGWFGRLGVVHEVEQVLK 388
>gi|115473887|ref|NP_001060542.1| Os07g0661900 [Oryza sativa Japonica Group]
gi|24414184|dbj|BAC22426.1| pentatricopeptide (PPR)repeat-containing protein-like [Oryza sativa
Japonica Group]
gi|113612078|dbj|BAF22456.1| Os07g0661900 [Oryza sativa Japonica Group]
gi|215697327|dbj|BAG91321.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 440
Score = 367 bits (941), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 181/345 (52%), Positives = 237/345 (68%), Gaps = 7/345 (2%)
Query: 71 DTSMFTWIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSP-------ETGNLSDL 123
+T F W G +E Q +AI K+ RC+A + +++C+ P + L L
Sbjct: 58 ETPRFRWDTFGSAPSEPQWEAIRGLSPKLPNRCRALMARLVCLPPPDQDGDEDEETLGAL 117
Query: 124 LAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKK 183
L WV+ MKP+R DWL VLK+L ME PL +V E ALLE+SFEAN+RDYTK+IH YGK+
Sbjct: 118 LVFWVKAMKPKRTDWLLVLKELTAMESPLLAEVLEHALLEDSFEANVRDYTKLIHIYGKQ 177
Query: 184 MQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSY 243
+Q AE+ AMK RG CDQV LT ++ MYSKAG+L A+E F EI LLG P+DKR Y
Sbjct: 178 KLLQKAEDAFHAMKSRGLPCDQVMLTALMDMYSKAGDLTRAKEIFNEIGLLGLPMDKRVY 237
Query: 244 GSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQF 303
GSM+MAY+RA MLD+ E ++ EM Q++ G EVYKALLR YS G+SEGAQRVF+AIQF
Sbjct: 238 GSMIMAYIRADMLDKAEDMISEMGDQQIVAGKEVYKALLRAYSYKGDSEGAQRVFDAIQF 297
Query: 304 AGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNR 363
AGI PD ++CALL+NAY +A + +A +NMR A + P +KC+ALIL A EK N+L
Sbjct: 298 AGIVPDTKLCALLVNAYCLADRINEAMIVTRNMRSARITPCNKCIALILGAYEKVNRLEG 357
Query: 364 ALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGL 408
AL FL +LE +G ++G+E S LA W +RLGVV+EVE VL++ +
Sbjct: 358 ALAFLTELEENGVIIGQEPSQLLAGWLRRLGVVQEVEQVLKDLAV 402
>gi|222637622|gb|EEE67754.1| hypothetical protein OsJ_25461 [Oryza sativa Japonica Group]
Length = 350
Score = 344 bits (883), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 169/307 (55%), Positives = 219/307 (71%), Gaps = 7/307 (2%)
Query: 109 QIICVSP-------ETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELAL 161
+++C+ P + L LL WV+ MKP+R DWL VLK+L ME PL +V E AL
Sbjct: 3 RLVCLPPPDQDGDEDEETLGALLVFWVKAMKPKRTDWLLVLKELTAMESPLLAEVLEHAL 62
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL 221
LE+SFEAN+RDYTK+IH YGK+ +Q AE+ AMK RG CDQV LT ++ MYSKAG+L
Sbjct: 63 LEDSFEANVRDYTKLIHIYGKQKLLQKAEDAFHAMKSRGLPCDQVMLTALMDMYSKAGDL 122
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
A+E F EI LLG P+DKR YGSM+MAY+RA MLD+ E ++ EM Q++ G EVYKAL
Sbjct: 123 TRAKEIFNEIGLLGLPMDKRVYGSMIMAYIRADMLDKAEDMISEMGDQQIVAGKEVYKAL 182
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
LR YS G+SEGAQRVF+AIQFAGI PD ++CALL+NAY +A + +A +NMR A +
Sbjct: 183 LRAYSYKGDSEGAQRVFDAIQFAGIVPDTKLCALLVNAYCLADRINEAMIVTRNMRSARI 242
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEH 401
P +KC+ALIL A EK N+L AL FL +LE +G ++G+E S LA W +RLGVV+EVE
Sbjct: 243 TPCNKCIALILGAYEKVNRLEGALAFLTELEENGVIIGQEPSQLLAGWLRRLGVVQEVEQ 302
Query: 402 VLREYGL 408
VL++ +
Sbjct: 303 VLKDLAV 309
>gi|218200200|gb|EEC82627.1| hypothetical protein OsI_27214 [Oryza sativa Indica Group]
Length = 347
Score = 344 bits (882), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 169/307 (55%), Positives = 219/307 (71%), Gaps = 7/307 (2%)
Query: 109 QIICVSP-------ETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELAL 161
+++C+ P + L LL WV+ MKP+R DWL VLK+L ME PL +V E AL
Sbjct: 3 RLVCLPPPDQDGDEDEETLGALLVFWVKAMKPKRTDWLLVLKELTAMESPLLAEVLEHAL 62
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL 221
LE+SFEAN+RDYTK+IH YGK+ +Q AE+ AMK RG CDQV LT ++ MYSKAG+L
Sbjct: 63 LEDSFEANVRDYTKLIHIYGKQKLLQKAEDAFHAMKSRGLPCDQVMLTALMDMYSKAGDL 122
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
A+E F EI LLG P+DKR YGSM+MAY+RA MLD+ E ++ EM Q++ G EVYKAL
Sbjct: 123 TRAKEIFNEIGLLGLPMDKRVYGSMIMAYIRADMLDKAEDMISEMGDQQIVAGKEVYKAL 182
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
LR YS G+SEGAQRVF+AIQFAGI PD ++CALL+NAY +A + +A +NMR A +
Sbjct: 183 LRAYSYKGDSEGAQRVFDAIQFAGIVPDTKLCALLVNAYCLADRINEAMIVTRNMRSARI 242
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEH 401
P +KC+ALIL A EK N+L AL FL +LE +G ++G+E S LA W +RLGVV+EVE
Sbjct: 243 TPCNKCIALILGAYEKVNRLEGALAFLTELEENGVIIGQEPSQLLAGWLRRLGVVQEVEQ 302
Query: 402 VLREYGL 408
VL++ +
Sbjct: 303 VLKDLAV 309
>gi|326500598|dbj|BAJ94965.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 339
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 149/251 (59%), Positives = 190/251 (75%)
Query: 155 QVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
+V E LLE+SFEAN+RDYTK+I YGK+ ++ AE AMK RG CDQV LT +V M
Sbjct: 22 EVLEYVLLEDSFEANVRDYTKLIQIYGKQNLLREAEEAFHAMKARGLPCDQVMLTALVDM 81
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
YSKAG+L A+ETF+EI LLG PLDKR+YGSM+MAY+RA MLD+ + L+++ + Q+V+ G
Sbjct: 82 YSKAGDLTRAKETFKEIVLLGLPLDKRAYGSMIMAYIRADMLDQADDLIKQTEDQQVFAG 141
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
EVYKALLR YS G+SEGAQRVF+A+QFAG PD ++CALL+NAY ++ + +A +
Sbjct: 142 KEVYKALLRAYSYRGDSEGAQRVFDAVQFAGTVPDTKLCALLVNAYCLSNRIDEAVCVTR 201
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
NMR AGLEP D+CVALIL A E ++L ALEFL +LE +G ++G+E S LAAWF RLG
Sbjct: 202 NMRSAGLEPCDRCVALILGAYENADRLEGALEFLAELEENGVVIGQEPSQLLAAWFGRLG 261
Query: 395 VVEEVEHVLRE 405
VV EVE VL E
Sbjct: 262 VVHEVEQVLEE 272
>gi|255541334|ref|XP_002511731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548911|gb|EEF50400.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 244
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 119/187 (63%), Positives = 144/187 (77%), Gaps = 2/187 (1%)
Query: 53 PALEAIKAEDMGKTQVKDDTSMFTWIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIIC 112
P L ++ G +VK D F W +IGPNIT+ Q+QAIS+ P KMT RCK V QIIC
Sbjct: 50 PVLATANVDESGTVEVKQDKPRFKWAEIGPNITKSQQQAISELPPKMTNRCKTLVTQIIC 109
Query: 113 VS--PETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANI 170
S + +LSDLL++WVR MKPRR DWL+VLKQLK MEHPLYL+VA+ AL+EESFEAN+
Sbjct: 110 SSYLLQNASLSDLLSSWVRIMKPRRTDWLSVLKQLKNMEHPLYLEVAKHALVEESFEANV 169
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
RDYTK+I+ YGK+ Q+Q+AE TLL MK+RGF+ DQVTLT M+ MYSKAGNL AEETFEE
Sbjct: 170 RDYTKVIYCYGKQTQLQDAETTLLDMKKRGFVVDQVTLTTMIDMYSKAGNLNQAEETFEE 229
Query: 231 IKLLGEP 237
+KLL P
Sbjct: 230 LKLLAHP 236
>gi|297844926|ref|XP_002890344.1| F18O14.27 [Arabidopsis lyrata subsp. lyrata]
gi|297336186|gb|EFH66603.1| F18O14.27 [Arabidopsis lyrata subsp. lyrata]
Length = 724
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 129/328 (39%), Positives = 195/328 (59%), Gaps = 2/328 (0%)
Query: 77 WIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRFMKPRRA 136
W+++ I E +++A + P+ +T +CK ++++ + E + S LLA W ++P R
Sbjct: 294 WVEMADRIHEAEEEADWREPKPVTGKCKLVMEKLESLQ-EGDDPSGLLAEWAELLEPNRV 352
Query: 137 DWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAM 196
DW+A+L QL+ YLQVAE L E+SF A+I DY+K+IH + K+ I++ E L M
Sbjct: 353 DWIALLNQLREGNTNAYLQVAERVLDEKSFNASISDYSKLIHIHAKENHIEDVERILKKM 412
Query: 197 KRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGML 256
+ G D +T T +V MYSK+GNL+ A E FE +K G LD++ Y +M+M YV AG
Sbjct: 413 SQNGIFPDILTATSLVHMYSKSGNLERATEAFENLKSYGLRLDEKIYEAMIMGYVNAGKP 472
Query: 257 DRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITP-DARMCAL 315
GE L++EM A+E+ EVY ALLR Y+ G++ GA + ++ +A P +L
Sbjct: 473 KLGERLVKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMLYASNDPLSFEAYSL 532
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+ AY AGQ KA + F MRK G +P DKC+A ++ A + EN L++AL L+ LE+DG
Sbjct: 533 FVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEKDG 592
Query: 376 FMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+G L W LG++EE E +L
Sbjct: 593 IEIGVITYTVLVDWMANLGLIEEAEQLL 620
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 74/183 (40%), Gaps = 12/183 (6%)
Query: 154 LQVAELALLEESFEANIRDYTKIIHGYGK---KMQIQNAENTLLAMKRRGFICDQVTLTV 210
+Q EL EE + A +R Y ++ G + A N L+ + ++
Sbjct: 482 MQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMLYASNDPLSFE---------AYSL 532
Query: 211 MVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE 270
V Y KAG + A+ F+E++ LG D + ++V AY LD+ LL +++
Sbjct: 533 FVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEKDG 592
Query: 271 VYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAY 330
+ +G Y L+ + G E A+++ I G P + L Y +K
Sbjct: 593 IEIGVITYTVLVDWMANLGLIEEAEQLLVKISQLGEAPPFELQVSLCCMYSSVRNEKKTL 652
Query: 331 TAF 333
A
Sbjct: 653 QAL 655
>gi|449470136|ref|XP_004152774.1| PREDICTED: protein NUCLEAR FUSION DEFECTIVE 5, mitochondrial-like
[Cucumis sativus]
Length = 717
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 134/345 (38%), Positives = 203/345 (58%), Gaps = 1/345 (0%)
Query: 71 DTSMFTWIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRF 130
D S W ++ + +K + Q P+ ++ CK ++I+ ++ E + S LLA W
Sbjct: 286 DLSDPKWSELADKLHVAEKLILPQEPKPISGMCKLVTEKILLLN-ENDDPSPLLAEWKEL 344
Query: 131 MKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAE 190
++P R DW+ +L +L LY +VAEL L EESF+ NIRDY+K+I Y K+ ++++AE
Sbjct: 345 LQPTRIDWITLLDRLNEKNRFLYFKVAELLLSEESFQTNIRDYSKLIEVYAKENRLEDAE 404
Query: 191 NTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAY 250
L+ M +G D +T ++ MYSKAGNL A++ F+ ++ G D++ Y SM+MAY
Sbjct: 405 RILVKMNEKGIAPDILTTIYLIHMYSKAGNLDSAKKAFDSLRSHGFQPDEKVYNSMIMAY 464
Query: 251 VRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDA 310
V AG GE L+R+M+A+++ ++Y ALLR +S G GA R+ +QFAGI+P+
Sbjct: 465 VNAGQPKLGESLMRDMEARDIKPSQDIYMALLRSFSQCGYVSGAGRIAATMQFAGISPNL 524
Query: 311 RMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLID 370
C LL+ AY AG KA F M K G P D+C A +++A EK+N L++AL+ L+
Sbjct: 525 ESCTLLVEAYGQAGDPDKARNNFDYMIKLGHAPDDRCTASMIAAYEKKNLLDKALDLLLQ 584
Query: 371 LERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRETYSKI 415
LE+DGF G L W +L +VEE E VL + G + Y I
Sbjct: 585 LEKDGFEPGLATYAVLVDWLGKLQLVEEAEQVLAKIGAQGHYLPI 629
>gi|449520042|ref|XP_004167043.1| PREDICTED: LOW QUALITY PROTEIN: protein NUCLEAR FUSION DEFECTIVE 5,
mitochondrial-like [Cucumis sativus]
Length = 717
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 134/345 (38%), Positives = 203/345 (58%), Gaps = 1/345 (0%)
Query: 71 DTSMFTWIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRF 130
D S W ++ + +K + Q P+ ++ CK ++I+ ++ E + S LLA W
Sbjct: 286 DLSDPKWSELADKLHVAEKLILPQEPKPISGMCKLVTEKILLLN-ENDDPSPLLAEWKEL 344
Query: 131 MKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAE 190
++P R DW+ +L +L LY +VAEL L EESF+ NIRDY+K+I Y K+ ++++AE
Sbjct: 345 LQPTRIDWITLLDRLNEKNRFLYFKVAELLLSEESFQTNIRDYSKLIEVYAKENRLEDAE 404
Query: 191 NTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAY 250
L+ M +G D +T ++ MYSKAGNL A++ F+ ++ G D++ Y SM+MAY
Sbjct: 405 RILVKMNEKGIAPDILTTIYLIHMYSKAGNLDSAKKAFDSLRSHGFQPDEKVYNSMIMAY 464
Query: 251 VRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDA 310
V AG GE L+R+M+A+++ ++Y ALLR +S G GA R+ +QFAGI+P+
Sbjct: 465 VNAGQPKLGESLMRDMEARDIKPSQDIYMALLRSFSQCGYVSGAGRIAATMQFAGISPNL 524
Query: 311 RMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLID 370
C LL+ AY AG KA F M K G P D+C A +++A EK+N L++AL+ L+
Sbjct: 525 ESCTLLVXAYGQAGDPDKARNNFDYMIKLGHAPDDRCTASMIAAYEKKNLLDKALDLLLQ 584
Query: 371 LERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRETYSKI 415
LE+DGF G L W +L +VEE E VL + G + Y I
Sbjct: 585 LEKDGFEPGLATYAVLVDWLGKLQLVEEAEQVLAKIGAQGHYLPI 629
>gi|302142507|emb|CBI19710.3| unnamed protein product [Vitis vinifera]
Length = 747
Score = 237 bits (605), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 128/333 (38%), Positives = 196/333 (58%), Gaps = 1/333 (0%)
Query: 71 DTSMFTWIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRF 130
D S W ++ + E ++ Q P+ ++ +CK ++I+ + E + S LL W
Sbjct: 287 DLSDPKWTEVADKVHEREEIIWPQEPKPISGKCKLITEKILNMK-EEDDPSPLLDEWAEL 345
Query: 131 MKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAE 190
++P R DW+ +L +LK LY +VAEL L ++SF+ NIRDY+K+I + K+ ++++AE
Sbjct: 346 LQPSRIDWITLLDRLKENNSHLYFKVAELVLSKKSFQTNIRDYSKLIDVHAKENRVEDAE 405
Query: 191 NTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAY 250
L M + D +T TV+V MYSKAGNL+ A+E FE ++ G D R Y SM+MAY
Sbjct: 406 RILKKMNENDILPDILTSTVLVHMYSKAGNLERAKEAFEGLRSQGFQPDTRVYNSMIMAY 465
Query: 251 VRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDA 310
V AG GE L+REM+A+++ E+Y +LL+ ++ G+ GAQR+ +QFAG P
Sbjct: 466 VNAGQPKLGESLMREMEARDIKPTKEIYMSLLQSFAQRGDIGGAQRISTTMQFAGFQPSL 525
Query: 311 RMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLID 370
C LL+ AY AG +A +F M K G P D+C A +++A EK N L++AL L+
Sbjct: 526 ESCTLLVEAYGQAGDPDQARNSFDYMIKVGHRPDDRCTASMIAAYEKGNLLDKALNLLLQ 585
Query: 371 LERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
LE+DGF G L W ++ +V+E E +L
Sbjct: 586 LEKDGFEPGVATYVVLVDWLGKMQLVDEAEQLL 618
>gi|225458257|ref|XP_002281331.1| PREDICTED: protein NUCLEAR FUSION DEFECTIVE 5, mitochondrial-like
[Vitis vinifera]
Length = 720
Score = 237 bits (605), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 128/333 (38%), Positives = 196/333 (58%), Gaps = 1/333 (0%)
Query: 71 DTSMFTWIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRF 130
D S W ++ + E ++ Q P+ ++ +CK ++I+ + E + S LL W
Sbjct: 287 DLSDPKWTEVADKVHEREEIIWPQEPKPISGKCKLITEKILNMK-EEDDPSPLLDEWAEL 345
Query: 131 MKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAE 190
++P R DW+ +L +LK LY +VAEL L ++SF+ NIRDY+K+I + K+ ++++AE
Sbjct: 346 LQPSRIDWITLLDRLKENNSHLYFKVAELVLSKKSFQTNIRDYSKLIDVHAKENRVEDAE 405
Query: 191 NTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAY 250
L M + D +T TV+V MYSKAGNL+ A+E FE ++ G D R Y SM+MAY
Sbjct: 406 RILKKMNENDILPDILTSTVLVHMYSKAGNLERAKEAFEGLRSQGFQPDTRVYNSMIMAY 465
Query: 251 VRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDA 310
V AG GE L+REM+A+++ E+Y +LL+ ++ G+ GAQR+ +QFAG P
Sbjct: 466 VNAGQPKLGESLMREMEARDIKPTKEIYMSLLQSFAQRGDIGGAQRISTTMQFAGFQPSL 525
Query: 311 RMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLID 370
C LL+ AY AG +A +F M K G P D+C A +++A EK N L++AL L+
Sbjct: 526 ESCTLLVEAYGQAGDPDQARNSFDYMIKVGHRPDDRCTASMIAAYEKGNLLDKALNLLLQ 585
Query: 371 LERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
LE+DGF G L W ++ +V+E E +L
Sbjct: 586 LEKDGFEPGVATYVVLVDWLGKMQLVDEAEQLL 618
>gi|186478661|ref|NP_564088.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|8778424|gb|AAF79432.1|AC025808_14 F18O14.27 [Arabidopsis thaliana]
gi|332191742|gb|AEE29863.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 725
Score = 237 bits (604), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 125/328 (38%), Positives = 194/328 (59%), Gaps = 2/328 (0%)
Query: 77 WIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRFMKPRRA 136
W+++ I E +++A + P+ +T +CK ++++ + E + S LLA W ++P R
Sbjct: 292 WVEMADKIHEAEEEADWREPKPVTGKCKLVMEKLESLQ-EGDDPSGLLAEWAELLEPNRV 350
Query: 137 DWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAM 196
DW+A++ QL+ YL+VAE L E+SF A+I DY+K+IH + K+ I++ E L M
Sbjct: 351 DWIALINQLREGNTHAYLKVAEGVLDEKSFNASISDYSKLIHIHAKENHIEDVERILKKM 410
Query: 197 KRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGML 256
+ G D +T T +V MYSK+GN + A E FE +K G D++ Y +M++ YV AG
Sbjct: 411 SQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGKP 470
Query: 257 DRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITP-DARMCAL 315
GE L++EM A+E+ EVY ALLR Y+ G++ GA + ++Q+A P +L
Sbjct: 471 KLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSFEAYSL 530
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+ AY AGQ KA + F MRK G +P DKC+A ++ A + EN L++AL L+ LE+DG
Sbjct: 531 FVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEKDG 590
Query: 376 FMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+G L W LG++EE E +L
Sbjct: 591 IEIGVITYTVLVDWMANLGLIEEAEQLL 618
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 75/183 (40%), Gaps = 12/183 (6%)
Query: 154 LQVAELALLEESFEANIRDYTKIIHGYGK---KMQIQNAENTLLAMKRRGFICDQVTLTV 210
+Q EL EE + A +R Y ++ G +Q A + L+ + ++
Sbjct: 480 MQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSFE---------AYSL 530
Query: 211 MVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE 270
V Y KAG + A+ F+E++ LG D + ++V AY LD+ LL +++
Sbjct: 531 FVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEKDG 590
Query: 271 VYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAY 330
+ +G Y L+ + G E A+++ I G P + L Y +K
Sbjct: 591 IEIGVITYTVLVDWMANLGLIEEAEQLLVKISQLGEAPPFELQVSLCCMYSGVRNEKKTL 650
Query: 331 TAF 333
A
Sbjct: 651 QAL 653
>gi|255538676|ref|XP_002510403.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551104|gb|EEF52590.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 719
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/333 (35%), Positives = 179/333 (53%), Gaps = 1/333 (0%)
Query: 71 DTSMFTWIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRF 130
D S W+++ I E Q P+ + + K ++I+ + E + S LLA W
Sbjct: 286 DLSDPKWVEVADKIHETGAIIWPQEPKPINGKSKLVTEKILSLK-EEDDPSQLLAEWAEL 344
Query: 131 MKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAE 190
++P R DWL +L +LK + +VAE L E+SF+ NIRDY+ +I + K QI++ E
Sbjct: 345 LQPNRVDWLTLLDKLKEKNMQTFFKVAEHLLNEKSFQPNIRDYSVLIDAHATKNQIEDVE 404
Query: 191 NTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAY 250
L M G D T +V MYSKAGN +E F ++ G D + Y SM+MA
Sbjct: 405 RILEKMNENGIFPDISASTALVHMYSKAGNFDRTKEAFGRLRSHGFQPDIKVYNSMIMAS 464
Query: 251 VRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDA 310
V AG G+ +REM+A+++ E+Y ALLR ++ G+ A ++ A+QFAG P+
Sbjct: 465 VNAGQPKLGDSFVREMEARDIKPTEEMYFALLRSFAQLGDVSEAHKIATAMQFAGFQPNL 524
Query: 311 RMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLID 370
LL+ A+ AGQ +A F M K G P D+ A +++A EK+N L+ AL+ L+
Sbjct: 525 EFYTLLVEAHGRAGQPDQARRNFDQMIKVGFRPDDRVAASLIAAYEKKNLLDEALDILLQ 584
Query: 371 LERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
L++DGF G L W +L +V+E E +L
Sbjct: 585 LKKDGFEPGLATCTVLVDWLAKLQLVDEAEQLL 617
Score = 38.1 bits (87), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ F + R +I Y KK + A + LL +K+ GF T TV+V +K
Sbjct: 550 MIKVGFRPDDRVAASLIAAYEKKNLLDEALDILLQLKKDGFEPGLATCTVLVDWLAKLQL 609
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ AE+ +I GE + S+ Y R G + +L ++A++ +GS ++
Sbjct: 610 VDEAEQLLGKIAEQGEAPPFKIQVSLCDMYARVGNEKKALQVLGVLEAKKEQLGSNDFER 669
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALL 316
++ G + A RV ++ G + ++ L
Sbjct: 670 VIHGLIAGRFVQEATRVHALMEAQGYSASEQLVVAL 705
>gi|356564280|ref|XP_003550383.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like isoform 1 [Glycine max]
gi|356564282|ref|XP_003550384.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like isoform 2 [Glycine max]
Length = 693
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 123/341 (36%), Positives = 188/341 (55%), Gaps = 3/341 (0%)
Query: 71 DTSMFTWIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETGN-LSDLLAAWVR 129
D S W Q+ I E ++ Q P+ +T + K + +I+ E + L LLA WV
Sbjct: 260 DLSDSKWAQVADRIHEAEQVFWPQEPKPITGKAKIVIAKILSSKEEDDDGLQSLLAEWVE 319
Query: 130 FMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNA 189
++P R +W+ +L +LK H LYL+VAE+ L E+SF+ N+ DY+++I Y K+ + +
Sbjct: 320 LVQPSRVEWMDLLDKLKEQNHGLYLKVAEMVLAEDSFQTNVSDYSRLIDIYAKENRFDDV 379
Query: 190 ENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMA 249
E L + G D + +V+MY K GNL A E F + LG D Y SM+M
Sbjct: 380 ERMLKKLNENGLQVDASIASTLVLMYCKGGNLARATEAFGVLTSLGFQPDAHVYNSMIMT 439
Query: 250 YVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGI--T 307
+V G GE L+R+MD + + + ++Y ALLR YS G+ A+R+ +QFAGI +
Sbjct: 440 FVNNGQPKLGEKLMRDMDDRLITITKDIYMALLRSYSQLGDVASAERISTTMQFAGIQQS 499
Query: 308 PDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
D C LL+ AY +A +A + F M K+G +P D+C A ++ A EK+N L+ AL
Sbjct: 500 TDKETCTLLVEAYALASNPDQARSHFDCMIKSGHQPDDRCTASMILAYEKKNDLDNALNL 559
Query: 368 LIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGL 408
L++LE+DGF G L W +L +V+E E +L + L
Sbjct: 560 LLELEKDGFEPGVATYSVLVDWLGKLQLVDEAEQLLGKIAL 600
>gi|115447253|ref|NP_001047406.1| Os02g0611400 [Oryza sativa Japonica Group]
gi|47497186|dbj|BAD19233.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|47497609|dbj|BAD19678.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536937|dbj|BAF09320.1| Os02g0611400 [Oryza sativa Japonica Group]
gi|215715250|dbj|BAG95001.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623225|gb|EEE57357.1| hypothetical protein OsJ_07494 [Oryza sativa Japonica Group]
Length = 683
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 117/335 (34%), Positives = 190/335 (56%), Gaps = 1/335 (0%)
Query: 71 DTSMFTWIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRF 130
D S TW ++ E + + Q + + + K ++++ V P G+ + + W
Sbjct: 247 DLSDPTWGEVVERAAEAEAHFVPQEAKPIEGKAKKAEEKLMAVDPRKGDPAPAMEEWKEE 306
Query: 131 MKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAE 190
+ P+RADW+A+L++LK LYL+VAE+ L +ESF A IRDY+K+I + K +++AE
Sbjct: 307 LLPKRADWMALLERLKARNVELYLKVAEILLADESFGATIRDYSKLIDLHSKANHVEDAE 366
Query: 191 NTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAY 250
L MK G D VT +V MY K GNL+ A + F+ +K G P D + + SM+ A+
Sbjct: 367 RILGKMKENGIAPDVVTSITLVHMYCKVGNLEQANQAFQFLKGEGFPPDMKLFTSMIRAH 426
Query: 251 VRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDA 310
+++G + E LLREM+ + + E++ ++ ++ G +GA+RV ++ AG
Sbjct: 427 LKSGEPKQAENLLREME-RSIKPTKELFMDVILAFAQRGMIDGAERVKTSMLLAGFQLTP 485
Query: 311 RMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLID 370
+ LI AY G +AYT F+ MR +G EP D+CVA ++ A +NQL+ AL FL+
Sbjct: 486 ELYTSLIEAYGRGGHVGQAYTLFEQMRSSGHEPDDRCVAGMMVAYMMKNQLDHALSFLLK 545
Query: 371 LERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
LE+DG G + + L W RL +V+E E V+++
Sbjct: 546 LEKDGLKPGVKTNLVLLDWLSRLQLVQEAEQVVQK 580
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 73/173 (42%), Gaps = 1/173 (0%)
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL 221
+E S + + +I + ++ I AE +M GF T ++ Y + G++
Sbjct: 442 MERSIKPTKELFMDVILAFAQRGMIDGAERVKTSMLLAGFQLTPELYTSLIEAYGRGGHV 501
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
A FE+++ G D R M++AY+ LD L +++ + G + L
Sbjct: 502 GQAYTLFEQMRSSGHEPDDRCVAGMMVAYMMKNQLDHALSFLLKLEKDGLKPGVKTNLVL 561
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
L S + A++V + I+ AG P M L + Y + Q ++ + +
Sbjct: 562 LDWLSRLQLVQEAEQVVQKIRKAGEEP-LEMHVFLADMYAKSQQEERTRKSLK 613
>gi|218191150|gb|EEC73577.1| hypothetical protein OsI_08035 [Oryza sativa Indica Group]
Length = 683
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 117/335 (34%), Positives = 189/335 (56%), Gaps = 1/335 (0%)
Query: 71 DTSMFTWIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRF 130
D S TW ++ E + + Q + + K ++++ V P G+ + + W
Sbjct: 247 DLSDPTWGEVVERAAEAEAHFVPQEANPIEGKAKKAEEKLMAVDPRKGDPAPAMEEWKEE 306
Query: 131 MKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAE 190
+ P+RADW+A+L++LK LYL+VAE+ L +ESF A IRDY+K+I + K +++AE
Sbjct: 307 LLPKRADWMALLERLKARNVELYLKVAEILLADESFGATIRDYSKLIDLHSKANHVEDAE 366
Query: 191 NTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAY 250
L MK G D VT +V MY K GNL+ A + F+ +K G P D + + SM+ A+
Sbjct: 367 RILGKMKENGIAPDVVTSITLVHMYCKVGNLEQANQAFQFLKGEGFPPDMKLFTSMIRAH 426
Query: 251 VRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDA 310
+++G + E LLREM+ + + E++ ++ ++ G +GA+RV ++ AG
Sbjct: 427 LKSGEPKQAENLLREME-RSIKPTKELFMDVILAFAQRGMIDGAERVKTSMLLAGFQLTP 485
Query: 311 RMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLID 370
+ LI AY G +AYT F+ MR +G EP D+CVA ++ A +NQL+ AL FL+
Sbjct: 486 ELYTSLIEAYGRGGHVGQAYTLFEQMRSSGHEPDDRCVAGMMVAYMMKNQLDHALSFLLK 545
Query: 371 LERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
LE+DG G + + L W RL +V+E E V+++
Sbjct: 546 LEKDGLKPGVKTNLVLLDWLSRLQLVQEAEQVVQK 580
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 73/173 (42%), Gaps = 1/173 (0%)
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL 221
+E S + + +I + ++ I AE +M GF T ++ Y + G++
Sbjct: 442 MERSIKPTKELFMDVILAFAQRGMIDGAERVKTSMLLAGFQLTPELYTSLIEAYGRGGHV 501
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
A FE+++ G D R M++AY+ LD L +++ + G + L
Sbjct: 502 GQAYTLFEQMRSSGHEPDDRCVAGMMVAYMMKNQLDHALSFLLKLEKDGLKPGVKTNLVL 561
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
L S + A++V + I+ AG P M L + Y + Q ++ + +
Sbjct: 562 LDWLSRLQLVQEAEQVVQKIRKAGEEP-LEMHVFLADMYAKSQQEERTRKSLK 613
>gi|326489801|dbj|BAK01881.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 788
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 115/335 (34%), Positives = 185/335 (55%), Gaps = 1/335 (0%)
Query: 71 DTSMFTWIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRF 130
D S W ++ E + + + + + + K +Q++ V P GN + W
Sbjct: 358 DLSDPKWAEVAERAAESEAHFVPEEAKAVDGKAKKAEEQLLAVEPRKGNPIPAMEEWKEE 417
Query: 131 MKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAE 190
++P+R DWLA+L+++K LYL++AE+ L E+SF ANIRDY+K+I + K + +AE
Sbjct: 418 LRPKRVDWLALLERVKARNVELYLKIAEILLDEDSFAANIRDYSKLIDLHSKATHVLDAE 477
Query: 191 NTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAY 250
L MK + D +T +V MYSK+GNL+ A F+ I+ G D R + SM+ A
Sbjct: 478 RILGKMKEKDIAPDILTSITLVHMYSKSGNLEQATRAFDFIEKEGLQPDTRLFTSMISAC 537
Query: 251 VRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDA 310
+ AG+ + E LL++MD + E+Y ++R Y+ +GAQ + + AGI P
Sbjct: 538 INAGVPKQAEKLLKKMDELSMKPSRELYMDVMRAYAERNLVDGAQMMRTQMSMAGIEPTL 597
Query: 311 RMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLID 370
LLI AY AG AY AF+ MRK G EP D+C+A +++ K NQL++AL+ L+
Sbjct: 598 ECFTLLIEAYGRAGNPDPAYEAFEQMRKNGHEPDDRCLAGMMTGLMKTNQLDQALKLLLS 657
Query: 371 LERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
L ++G G + + L W L +V+E E ++++
Sbjct: 658 L-KEGVKPGVKTNLVLLDWLSMLQLVQEAEQLVQK 691
>gi|242062290|ref|XP_002452434.1| hypothetical protein SORBIDRAFT_04g025740 [Sorghum bicolor]
gi|241932265|gb|EES05410.1| hypothetical protein SORBIDRAFT_04g025740 [Sorghum bicolor]
Length = 682
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 112/338 (33%), Positives = 186/338 (55%), Gaps = 3/338 (0%)
Query: 71 DTSMFTWIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRF 130
D S W ++ + E + + + + + R K ++++ V P G+ + W
Sbjct: 244 DMSDPKWAEVAERVAEAEAHFVPEEAKAVEGRAKKAEERLLLVDPRRGDPVPAIEEWKED 303
Query: 131 MKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAE 190
++P+R DW+A+L+++K LYL+VAE+ L +ESFEANIRDY+K+I + K +++AE
Sbjct: 304 LRPKRVDWIALLERIKARNVELYLKVAEILLDQESFEANIRDYSKLIDLHAKANHVESAE 363
Query: 191 NTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAY 250
L MK +G D +T V+V MYSKAGNL+ A+E FE I+ G D + + SM+ Y
Sbjct: 364 RVLGKMKEKGIAPDVITSIVLVHMYSKAGNLEQAKEAFEFIRREGFKPDLKLFSSMINCY 423
Query: 251 VRAGMLDRGEVLLREMDAQEVYVGS--EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITP 308
+ G + E L++ M V V E+Y ++R Y+ G AQRV + I P
Sbjct: 424 INHGEPEEAENLIKSMRGTRVIVKPTREIYTDIVRAYAQRGMMTCAQRVLNMMTHDEIKP 483
Query: 309 DARMCALLINAYQMAGQSQKAYTAFQNMRKA-GLEPSDKCVALILSACEKENQLNRALEF 367
+ A+ I AY G +A F +R+ G EP D +A +++A ++NQL+ AL++
Sbjct: 484 TEELYAICIEAYGRIGDPIQARAMFDQIRRRLGHEPGDSSIAGVVAAHIEKNQLDEALQW 543
Query: 368 LIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
L+ LE++G +G + + L W L +V E E ++++
Sbjct: 544 LLSLEKEGVELGVKTNLVLLDWLSMLQLVLEAEQLVQK 581
>gi|357142830|ref|XP_003572708.1| PREDICTED: uncharacterized protein LOC100834819 [Brachypodium
distachyon]
Length = 780
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 180/304 (59%)
Query: 102 RCKAFVKQIICVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELAL 161
+ K +Q++ V P G+ + + W ++P+RADW+A+L+++K LYL+VAE+ L
Sbjct: 374 KAKKAEEQLLAVEPRKGDPAPAMEEWKEELRPKRADWMALLERVKARNVELYLKVAEILL 433
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL 221
EE+F+ IRDY+K+I + K +++AE L M+ +G D +T +V MYSKAGNL
Sbjct: 434 AEETFDVTIRDYSKLIDLHSKANHVEDAERILGKMREKGIAPDIITSITLVHMYSKAGNL 493
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
+ A+E+F I+ G D + + SM+ AY+ AG + E L+++M+ + E+Y +
Sbjct: 494 EQAKESFAFIQKEGLQPDMKLFTSMINAYINAGEPKQAEDLVKQMENLSIKPTREIYMDV 553
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+R Y+ G +GA R+ + FAG+ P LL+ AY G AY F+ MR G
Sbjct: 554 MRAYADRGLVDGADRMRNTMTFAGVEPTLECFTLLVEAYGRIGDPDHAYALFEVMRSNGH 613
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEH 401
+P D+C+A ++S ++NQL++AL+ L+ LE++G G + + L W L +V+E E
Sbjct: 614 KPDDRCLAGMISGHMRKNQLDQALKLLLSLEKEGLKPGVKTNLVLLDWLSTLHLVQEAEQ 673
Query: 402 VLRE 405
++++
Sbjct: 674 LVQK 677
>gi|212274517|ref|NP_001130401.1| uncharacterized protein LOC100191497 [Zea mays]
gi|194689030|gb|ACF78599.1| unknown [Zea mays]
gi|413937743|gb|AFW72294.1| hypothetical protein ZEAMMB73_720731 [Zea mays]
Length = 673
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 107/336 (31%), Positives = 182/336 (54%), Gaps = 1/336 (0%)
Query: 71 DTSMFTWIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRF 130
D S W ++ + E + + + + + R K ++++ V P +G+ + W
Sbjct: 239 DMSDPKWAEVAERVAEAEAHFVPEEAKAVEGRAKKAEERLLSVDPRSGDPVPAIEEWKED 298
Query: 131 MKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAE 190
++P R DW+++L+++K LYL+VAE+ L +ESFEANIRDY+K+I + K +++AE
Sbjct: 299 LRPNRVDWISLLERIKARNVELYLKVAEILLDQESFEANIRDYSKLIDLHAKANNVESAE 358
Query: 191 NTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAY 250
L MK +G D + V+V MYS+AG L+ A+E F+ I+ D++ + SM+ Y
Sbjct: 359 RVLGKMKEKGIAPDVIISIVLVHMYSRAGKLEQAKEAFDFIRREDFKPDRKLFSSMIKCY 418
Query: 251 VRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDA 310
+ G ++ E L++ M V E+Y LLR Y G A+RV + + F + P
Sbjct: 419 INHGEPEQAENLIKVMRDTRVKPTREIYIGLLRSYVQRGLMAYAERVLKTMSFDRVEPTQ 478
Query: 311 RMCALLINAYQMAGQSQKAYTAFQNM-RKAGLEPSDKCVALILSACEKENQLNRALEFLI 369
+ + I AY G ++A F M RK G E D +A +++A K NQL+ AL++L+
Sbjct: 479 ELYTICIEAYGRVGDPKEACAMFDQMRRKFGHEADDSSIAGVVAAYMKNNQLDHALQWLL 538
Query: 370 DLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
LE++G +G + + L W L +V E E +++
Sbjct: 539 SLEKEGLQLGVKTNLMLLDWLSMLQLVPEAEQFVQK 574
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 80/163 (49%), Gaps = 4/163 (2%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
EA+ ++ Y K Q+ +A LL++++ G T +++ S + AE+
Sbjct: 511 EADDSSIAGVVAAYMKNNQLDHALQWLLSLEKEGLQLGVKTNLMLLDWLSMLQLVPEAEQ 570
Query: 227 TFEEIKLLG-EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
++IK LG EP++ + + Y ++ D+ L+ ++ ++ + S+ ++ ++RG
Sbjct: 571 FVQKIKNLGEEPIEVHVF--LADMYAKSSQEDKARRSLKILEEKKKLLKSDQFERVIRGL 628
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
G SE A + ++ ++ G P ++ + + A ++ G S +
Sbjct: 629 VDGGFSEEANKFYKMMKSCGFEP-SKTIEVAVKALRIRGGSHR 670
>gi|195649551|gb|ACG44243.1| hypothetical protein [Zea mays]
Length = 673
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 182/336 (54%), Gaps = 1/336 (0%)
Query: 71 DTSMFTWIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRF 130
D S W ++ + E + + + + + R K ++++ V P +G+ + W
Sbjct: 239 DMSDPKWAEVAERVAEAEAHFVPEEAKAVEGRAKKAEERLLSVDPRSGDPVPAIEEWKED 298
Query: 131 MKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAE 190
++P R DW+++L+++K LYL+VAE+ L +ESFEANIRDY+K+I + K +++AE
Sbjct: 299 LRPNRVDWISLLERIKARNVELYLKVAEILLDQESFEANIRDYSKLIDLHAKANNVESAE 358
Query: 191 NTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAY 250
L MK +G D + V+V MYS+AG L+ A+E F+ I+ D++ + SM+ Y
Sbjct: 359 RVLGKMKEKGIAPDVIISIVLVHMYSRAGKLEQAKEAFDFIRREDFKPDRKLFSSMIKCY 418
Query: 251 VRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDA 310
+ G ++ E L++ M V E+Y LLR Y G A+RV + + F + P
Sbjct: 419 INHGEPEQAENLIKVMRDTRVKPTREIYIGLLRSYVQRGLMAYAERVLKTMSFDRVEPTQ 478
Query: 311 RMCALLINAYQMAGQSQKAYTAFQNM-RKAGLEPSDKCVALILSACEKENQLNRALEFLI 369
+ + I AY G ++A F M RK G E D +A +++A K NQL+ AL++L+
Sbjct: 479 ELYTICIEAYGRVGDPKEACAMFDQMRRKFGHEADDSSIAGVVAAYMKNNQLDHALQWLL 538
Query: 370 DLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
L+++G +G + + L W L +V E E +++
Sbjct: 539 SLDKEGLQLGVKTNLMLLDWLSMLQLVPEAEQFVQK 574
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 79/163 (48%), Gaps = 4/163 (2%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
EA+ ++ Y K Q+ +A LL++ + G T +++ S + AE+
Sbjct: 511 EADDSSIAGVVAAYMKNNQLDHALQWLLSLDKEGLQLGVKTNLMLLDWLSMLQLVPEAEQ 570
Query: 227 TFEEIKLLG-EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
++IK LG EP++ + + Y ++ D+ L+ ++ ++ + S+ ++ ++RG
Sbjct: 571 FVQKIKNLGEEPIEVHVF--LADMYAKSSQEDKARRSLKILEEKKKLLKSDQFERVIRGL 628
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
G SE A + ++ ++ G P ++ + + A ++ G S +
Sbjct: 629 VDGGFSEEANKFYKMMKSCGFEP-SKTIEVAVKALRIRGGSHR 670
>gi|356553875|ref|XP_003545276.1| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial-like [Glycine max]
Length = 691
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 120/348 (34%), Positives = 184/348 (52%), Gaps = 10/348 (2%)
Query: 71 DTSMFTWIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIIC------VSPETGNLSDLL 124
D S W Q+ I E ++ Q P+ +T + K +I+ E L LL
Sbjct: 251 DLSDPKWAQVADRIHEAEQVFWPQEPKPITGKAKIVTTKILLSKEEEEEEEEEDGLQSLL 310
Query: 125 AAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKM 184
A WV ++P R +W+ +L +LK LY +VAE+ L E+SF+ ++ DY+++I Y K+
Sbjct: 311 AEWVELVQPSRVEWMDLLDKLKEHNPGLYFKVAEMVLTEDSFQTHVSDYSRLIDIYAKEN 370
Query: 185 QIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYG 244
+ + E L + G D + +V+MY K G+L A+E FE + LG D Y
Sbjct: 371 RFDDVERMLKKLNENGLQVDASIASTLVLMYCKRGDLAHAKEAFEVLTSLGFQPDAHVYN 430
Query: 245 SMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFA 304
SM+ A V G GE L+R+MD + + + ++Y ALLR +S G++ GA+R+ +QFA
Sbjct: 431 SMITALVNNGQPKLGEKLMRDMDDRHIPITKDIYMALLRSFSQLGDAVGAERISNTMQFA 490
Query: 305 GITP--DARMCALLINAYQMA--GQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQ 360
GI D LLI A +A +A + F M K G +P D+C A ++SA EK+N
Sbjct: 491 GIQQGMDMETSTLLIEASALAVPCNPDQARSHFDYMIKLGHKPDDRCTASMISAYEKKNY 550
Query: 361 LNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGL 408
L+ AL L++LE+DGF G L W +L +V+E E +L + L
Sbjct: 551 LDNALNLLLELEKDGFEPGVATYSVLVDWLGKLQLVDEAEQLLGKIAL 598
>gi|115529193|dbj|BAF34329.1| pentatricopeptide repeat protein [Physcomitrella patens]
gi|115529195|dbj|BAF34330.1| pentatricopeptide repeat protein [Physcomitrella patens]
Length = 513
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/311 (35%), Positives = 164/311 (52%), Gaps = 6/311 (1%)
Query: 99 MTKRCKAFVKQIICVS---PETGNLSDLLAAWVRFMKPRRADWLAVLKQL-KLMEHPLYL 154
+TKR VK + S P+ + L WV M+P R DWL VLK+ +E LYL
Sbjct: 100 VTKRALHIVKILRSSSNLLPD--EIDATLQKWVTSMQPNRKDWLTVLKEFDNRLERLLYL 157
Query: 155 QVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
++ E LL+ FEA +RDYTK+I YG++ + AE M+ RG D TV++
Sbjct: 158 KIFEWGLLQSWFEAGVRDYTKLIDKYGREGNVVEAEQMFRIMEERGIPADLGAFTVLIAA 217
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
Y +A L+ ++ +++ L G LD Y ++++AY GM E +L M++ V G
Sbjct: 218 YGRAKMLEKVKQVLQDVSLAGLELDAVFYKTVIVAYGSVGMPKEAEDVLSSMESAGVPDG 277
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+ Y ALL Y G++ AQRVF+ + G D + L+ AY A A FQ
Sbjct: 278 KDAYLALLNAYGRLGHASDAQRVFDRMHLKGFRGDLKAFTALLEAYSNAQDYANAELVFQ 337
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
++R AGL+P D+ +A ++S K N LNRA E +++LE G G +L WF + G
Sbjct: 338 SLRAAGLKPDDRALASMVSVYAKANMLNRAAEVIVELEGAGMRFGPVTLTSLIGWFGKAG 397
Query: 395 VVEEVEHVLRE 405
+VEE +H +E
Sbjct: 398 LVEEAKHCFQE 408
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 86/182 (47%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +++ YG+ +A+ M +GF D T ++ YS A + AE F+ ++
Sbjct: 281 YLALLNAYGRLGHASDAQRVFDRMHLKGFRGDLKAFTALLEAYSNAQDYANAELVFQSLR 340
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D R+ SMV Y +A ML+R ++ E++ + G +L+ + G E
Sbjct: 341 AAGLKPDDRALASMVSVYAKANMLNRAAEVIVELEGAGMRFGPVTLTSLIGWFGKAGLVE 400
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ F+ ++ + + A + AY AG+ + A + + ++ +AG+E + A++
Sbjct: 401 EAKHCFQELKRKRLPISGKAYANMFAAYARAGELETAGSIWASIEEAGIELDHRECAVMA 460
Query: 353 SA 354
A
Sbjct: 461 EA 462
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 74/156 (47%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ F +++ +T ++ Y NAE +++ G D L MV +Y+KA L
Sbjct: 307 KGFRGDLKAFTALLEAYSNAQDYANAELVFQSLRAAGLKPDDRALASMVSVYAKANMLNR 366
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A E E++ G + S++ + +AG+++ + +E+ + + + + Y +
Sbjct: 367 AAEVIVELEGAGMRFGPVTLTSLIGWFGKAGLVEEAKHCFQELKRKRLPISGKAYANMFA 426
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
Y+ G E A ++ +I+ AGI D R CA++ A
Sbjct: 427 AYARAGELETAGSIWASIEEAGIELDHRECAVMAEA 462
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 55/136 (40%)
Query: 274 GSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAF 333
G Y L+ Y GN A+++F ++ GI D +LI AY A +K
Sbjct: 172 GVRDYTKLIDKYGREGNVVEAEQMFRIMEERGIPADLGAFTVLIAAYGRAKMLEKVKQVL 231
Query: 334 QNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRL 393
Q++ AGLE ++ A A + L +E G GK+A L + RL
Sbjct: 232 QDVSLAGLELDAVFYKTVIVAYGSVGMPKEAEDVLSSMESAGVPDGKDAYLALLNAYGRL 291
Query: 394 GVVEEVEHVLREYGLR 409
G + + V L+
Sbjct: 292 GHASDAQRVFDRMHLK 307
>gi|168060335|ref|XP_001782152.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666390|gb|EDQ53046.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 281
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 102/280 (36%), Positives = 152/280 (54%), Gaps = 1/280 (0%)
Query: 127 WVRFMKPRRADWLAVLKQL-KLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQ 185
WV M+P R DWL VLK+ +E LYL++ E LL+ FEA +RDYTK+I YG++
Sbjct: 1 WVTSMQPNRKDWLTVLKEFDNRLERLLYLKIFEWGLLQSWFEAGVRDYTKLIDKYGREGN 60
Query: 186 IQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGS 245
+ AE M+ RG D TV++ Y +A L+ ++ +++ L G LD Y +
Sbjct: 61 VVEAEQMFRIMEERGIPADLGAFTVLIAAYGRAKMLEKVKQVLQDVSLAGLELDAVFYKT 120
Query: 246 MVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAG 305
+++AY GM E +L M++ V G + Y ALL Y G++ AQRVF+ + G
Sbjct: 121 VIVAYGSVGMPKEAEDVLSSMESAGVPDGKDAYLALLNAYGRLGHASDAQRVFDRMHLKG 180
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
D + L+ AY A A FQ++R AGL+P D+ +A ++S K N LNRA
Sbjct: 181 FRGDLKAFTALLEAYSNAQDYANAELVFQSLRAAGLKPDDRALASMVSVYAKANMLNRAA 240
Query: 366 EFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
E +++LE G G +L WF + G+VEE +H +E
Sbjct: 241 EVIVELEGAGMRFGPVTLTSLIGWFGKAGLVEEAKHCFQE 280
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 60/129 (46%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +++ YG+ +A+ M +GF D T ++ YS A + AE F+ ++
Sbjct: 153 YLALLNAYGRLGHASDAQRVFDRMHLKGFRGDLKAFTALLEAYSNAQDYANAELVFQSLR 212
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D R+ SMV Y +A ML+R ++ E++ + G +L+ + G E
Sbjct: 213 AAGLKPDDRALASMVSVYAKANMLNRAAEVIVELEGAGMRFGPVTLTSLIGWFGKAGLVE 272
Query: 293 GAQRVFEAI 301
A+ F+ +
Sbjct: 273 EAKHCFQEL 281
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 55/136 (40%)
Query: 274 GSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAF 333
G Y L+ Y GN A+++F ++ GI D +LI AY A +K
Sbjct: 44 GVRDYTKLIDKYGREGNVVEAEQMFRIMEERGIPADLGAFTVLIAAYGRAKMLEKVKQVL 103
Query: 334 QNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRL 393
Q++ AGLE ++ A A + L +E G GK+A L + RL
Sbjct: 104 QDVSLAGLELDAVFYKTVIVAYGSVGMPKEAEDVLSSMESAGVPDGKDAYLALLNAYGRL 163
Query: 394 GVVEEVEHVLREYGLR 409
G + + V L+
Sbjct: 164 GHASDAQRVFDRMHLK 179
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 76/187 (40%), Gaps = 4/187 (2%)
Query: 84 ITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETG---NLSDLLAAWVRFMKPRRAD-WL 139
+ E+ KQ + + F K +I G D+L++ P D +L
Sbjct: 95 MLEKVKQVLQDVSLAGLELDAVFYKTVIVAYGSVGMPKEAEDVLSSMESAGVPDGKDAYL 154
Query: 140 AVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR 199
A+L + H Q + + F +++ +T ++ Y NAE +++
Sbjct: 155 ALLNAYGRLGHASDAQRVFDRMHLKGFRGDLKAFTALLEAYSNAQDYANAELVFQSLRAA 214
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G D L MV +Y+KA L A E E++ G + S++ + +AG+++
Sbjct: 215 GLKPDDRALASMVSVYAKANMLNRAAEVIVELEGAGMRFGPVTLTSLIGWFGKAGLVEEA 274
Query: 260 EVLLREM 266
+ +E+
Sbjct: 275 KHCFQEL 281
>gi|357506867|ref|XP_003623722.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498737|gb|AES79940.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 509
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 78/122 (63%), Positives = 99/122 (81%)
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
++GAQRVF+AIQ AGI PD +MC+LLI AY MAGQSQKA AF+NM++AG+EP+DKC++
Sbjct: 385 TQGAQRVFDAIQLAGIIPDDKMCSLLIYAYSMAGQSQKARIAFENMKRAGIEPTDKCISS 444
Query: 351 ILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRE 410
+L A EKEN LN ALEFLI+LERDG MV +E S LA WF++LGVVEEVE VLR++
Sbjct: 445 VLVAYEKENMLNTALEFLIELERDGIMVKEETSRILAGWFRKLGVVEEVELVLRDFATTT 504
Query: 411 TY 412
++
Sbjct: 505 SH 506
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 2/127 (1%)
Query: 156 VAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
++E LL+ S E + + + + + ++ Q A+ A++ G I D ++++ Y
Sbjct: 355 LSESRLLQVSLEVLAKLHLRNVDLEKRLLETQGAQRVFDAIQLAGIIPDDKMCSLLIYAY 414
Query: 216 SKAGNLKMAEETFEEIKLLG-EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
S AG + A FE +K G EP DK S+++AY + ML+ L E++ + V
Sbjct: 415 SMAGQSQKARIAFENMKRAGIEPTDK-CISSVLVAYEKENMLNTALEFLIELERDGIMVK 473
Query: 275 SEVYKAL 281
E + L
Sbjct: 474 EETSRIL 480
>gi|193806506|sp|Q940Z1.2|PPR51_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g19525
Length = 316
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/209 (40%), Positives = 122/209 (58%), Gaps = 1/209 (0%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M + G D +T T +V MYSK+GN + A E FE +K G D++ Y +M++ YV AG
Sbjct: 1 MSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGK 60
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITP-DARMCA 314
GE L++EM A+E+ EVY ALLR Y+ G++ GA + ++Q+A P +
Sbjct: 61 PKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSFEAYS 120
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
L + AY AGQ KA + F MRK G +P DKC+A ++ A + EN L++AL L+ LE+D
Sbjct: 121 LFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEKD 180
Query: 375 GFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
G +G L W LG++EE E +L
Sbjct: 181 GIEIGVITYTVLVDWMANLGLIEEAEQLL 209
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 69/158 (43%), Gaps = 12/158 (7%)
Query: 154 LQVAELALLEESFEANIRDYTKIIHGYGK---KMQIQNAENTLLAMKRRGFICDQVTLTV 210
+Q EL EE + A +R Y ++ G +Q A + L+ + ++
Sbjct: 71 MQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSFE---------AYSL 121
Query: 211 MVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE 270
V Y KAG + A+ F+E++ LG D + ++V AY LD+ LL +++
Sbjct: 122 FVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEKDG 181
Query: 271 VYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITP 308
+ +G Y L+ + G E A+++ I G P
Sbjct: 182 IEIGVITYTVLVDWMANLGLIEEAEQLLVKISQLGEAP 219
>gi|224082876|ref|XP_002306874.1| predicted protein [Populus trichocarpa]
gi|222856323|gb|EEE93870.1| predicted protein [Populus trichocarpa]
Length = 297
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/208 (39%), Positives = 123/208 (59%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M G D +T ++V MYSKAGNL A E E ++ LG D+ Y SM+MAYV AG
Sbjct: 1 MNENGIQPDALTTNILVHMYSKAGNLDRAREALESLRRLGFRPDREIYNSMIMAYVNAGQ 60
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
E+L+REM+A+++ E+Y LLR +S +G+ GA R+ +QFAG P+ C L
Sbjct: 61 PKLAELLMREMEARDIKPTMEIYMTLLRSFSQHGDVGGAGRIATTMQFAGFQPNLESCTL 120
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
L+ + G +A F + + G +P D+C A +++A EK+N L++AL+ L++LE+DG
Sbjct: 121 LVETFGQVGDPDQARNNFDYLMRLGHKPDDRCTAGMIAAYEKKNMLDKALKLLLELEQDG 180
Query: 376 FMVGKEASCTLAAWFKRLGVVEEVEHVL 403
F G L W +L +V+EVE +L
Sbjct: 181 FEPGLATDTVLVDWLGKLQLVDEVEQLL 208
>gi|340034695|gb|AEK28679.1| pentatricopeptide repeat protein [Populus tremula]
Length = 222
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 118/195 (60%)
Query: 209 TVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
++V MYSKAGNL A E E ++ LG D+ Y SM+MAYV AG E+L+REM+A
Sbjct: 2 NILVHMYSKAGNLDRAREALESLRRLGFRPDREIYNSMIMAYVNAGQPKLAELLMREMEA 61
Query: 269 QEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
+++ E+Y LLR +S +G+ GA R+ +QFAG P+ C LL+ + G +
Sbjct: 62 RDIKPTMEIYMTLLRSFSQHGDVGGAGRIATTMQFAGFQPNLESCTLLVETFGQVGDPDQ 121
Query: 329 AYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAA 388
A F + + G +P D+C A +++A EK+N L++AL+ L++LE+DGF G L
Sbjct: 122 ARNNFDYLMRLGHKPDDRCTAGMIAAYEKKNMLDKALKLLLELEKDGFEPGLATDTVLVD 181
Query: 389 WFKRLGVVEEVEHVL 403
W +L +V+EVE +L
Sbjct: 182 WLGKLQLVDEVEQLL 196
>gi|15450492|gb|AAK96539.1| At1g19520/F18O14_36 [Arabidopsis thaliana]
gi|16974463|gb|AAL31235.1| At1g19520/F18O14_36 [Arabidopsis thaliana]
Length = 266
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 93/159 (58%), Gaps = 1/159 (0%)
Query: 246 MVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAG 305
M++ YV AG GE L++EM A+E+ EVY ALLR Y+ G++ GA + ++Q+A
Sbjct: 1 MILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYAS 60
Query: 306 ITP-DARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
P +L + AY AGQ KA + F MRK G +P DKC+A ++ A + EN L++A
Sbjct: 61 DGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKA 120
Query: 365 LEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
L L+ LE+DG +G L W LG++EE E +L
Sbjct: 121 LRLLLQLEKDGIEIGVITYTVLVDWMANLGLIEEAEQLL 159
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 69/158 (43%), Gaps = 12/158 (7%)
Query: 154 LQVAELALLEESFEANIRDYTKIIHGYGK---KMQIQNAENTLLAMKRRGFICDQVTLTV 210
+Q EL EE + A +R Y ++ G +Q A + L+ + ++
Sbjct: 21 MQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSFE---------AYSL 71
Query: 211 MVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE 270
V Y KAG + A+ F+E++ LG D + ++V AY LD+ LL +++
Sbjct: 72 FVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEKDG 131
Query: 271 VYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITP 308
+ +G Y L+ + G E A+++ I G P
Sbjct: 132 IEIGVITYTVLVDWMANLGLIEEAEQLLVKISQLGEAP 169
>gi|255549482|ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545122|gb|EEF46633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 924
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 132/281 (46%), Gaps = 19/281 (6%)
Query: 104 KAFVKQIICVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLE 163
KAF ++++ PE N D+++A+ R KP R ++ ++ Y + ++
Sbjct: 278 KAF-RRVLETQPE--NWQDVVSAFERIKKPSRREYGLMVS--------YYARRGDMHRAR 326
Query: 164 ESFEA--------NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
++FE+ YT +IH Y ++ A + MK G VT +++V +
Sbjct: 327 QTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCARKMKEEGVEMSLVTYSIIVGGF 386
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
+K GN A+ F+E K ++ YG+M+ AY + +D+ E L+REM+ + +
Sbjct: 387 AKIGNADAADRWFKEAKDRHSHMNAIIYGNMIYAYCQTCNMDQAEALVREMEGEGIDAPI 446
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
++Y ++ GY+M GN E VFE ++ G P LIN Y G+ KA +
Sbjct: 447 DIYHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVVSYGCLINLYAKVGKISKALEVSKM 506
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
M AG++ + K +++++ K A D+ +DG
Sbjct: 507 MESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVVKDGL 547
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 103/230 (44%), Gaps = 1/230 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+ + +I G +K Q++ A L M G ++ T T ++ Y+ G+ A E F
Sbjct: 620 TVHTFNALILGLVEKRQMEKAIEILDEMALAGVSPNEHTYTTIMHGYAALGDTGKAFEYF 679
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+++ G LD +Y +++ A ++G + + +EM AQ + + VY L+ G++
Sbjct: 680 TKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFVYNILIDGWARR 739
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G+ A + + ++ G+ PD INA AG +A + M +G++P+ K
Sbjct: 740 GDVWEAADLMQQMKQGGVKPDIHTYTSFINACCKAGDMLRASKMMEEMETSGVKPNVKTY 799
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEA-SCTLAAWFKRLGVVE 397
++ + + +AL +++ G K C + A R V E
Sbjct: 800 TTLIHGWARASLPEKALRCFQEMKLAGLKPDKAVYHCLMTALLSRATVTE 849
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 90/218 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E F ++ Y +I+ Y K +I A M+ G + T ++++ + K +
Sbjct: 472 LKECGFAPSVVSYGCLINLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLINGFLKLKD 531
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A FE++ G D Y +++ A+ G +DR +++EM + S +
Sbjct: 532 WANAFAIFEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMP 591
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G++ G + A VF+ ++ +G P LI Q +KA M AG
Sbjct: 592 IIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMALAG 651
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMV 378
+ P++ I+ +A E+ L +G +
Sbjct: 652 VSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRDEGLQL 689
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 84/203 (41%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+ Y + + AE + M+ G M+ Y+ GN + FE +K
Sbjct: 414 YGNMIYAYCQTCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLK 473
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G SYG ++ Y + G + + + + M++ + + Y L+ G+ +
Sbjct: 474 ECGFAPSVVSYGCLINLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWA 533
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +FE + G+ PD + +I A+ G +A + M+K P+ + I+
Sbjct: 534 NAFAIFEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMPII 593
Query: 353 SACEKENQLNRALEFLIDLERDG 375
+ ++ RAL+ + R G
Sbjct: 594 HGFARAGEMKRALDVFDMMRRSG 616
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 77/170 (45%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L +E + ++ Y ++ K ++Q+A M + + +++ +++ G+
Sbjct: 682 LRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFVYNILIDGWARRGD 741
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + +++K G D +Y S + A +AG + R ++ EM+ V + Y
Sbjct: 742 VWEAADLMQQMKQGGVKPDIHTYTSFINACCKAGDMLRASKMMEEMETSGVKPNVKTYTT 801
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAY 330
L+ G++ E A R F+ ++ AG+ PD + L+ A +AY
Sbjct: 802 LIHGWARASLPEKALRCFQEMKLAGLKPDKAVYHCLMTALLSRATVTEAY 851
>gi|449435168|ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Cucumis sativus]
Length = 962
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 132/278 (47%), Gaps = 18/278 (6%)
Query: 107 VKQIICVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESF 166
++++I PE N +++A+ R KP R K+ LM + Y + ++ E+F
Sbjct: 285 LRKVIETEPE--NWQAVVSAFERIKKPSR-------KEYGLMVN-YYTRRGDMHRARETF 334
Query: 167 E--------ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
E + YT +IH Y ++ A + + MK G VT +++V ++K
Sbjct: 335 EKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVSGFAKT 394
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
GN + A+ F+E K L+ YG+++ AY + +D+ E L+REM+ + + ++Y
Sbjct: 395 GNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIY 454
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
++ GY+M G+ + VFE + G+ P LIN Y G+ KA + M
Sbjct: 455 HTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEH 514
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
AG++ + K +++++ K A DL +DG
Sbjct: 515 AGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGI 552
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 98/207 (47%)
Query: 170 IRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFE 229
+ Y +I G +K +++ AE L M G ++ T T ++ Y+ G+ A F
Sbjct: 626 VHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFT 685
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
+++ G LD +Y +++ A ++G + + +EM AQ + + +Y L+ G++ G
Sbjct: 686 KLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRG 745
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
+ A + + ++ G+ PD INA AG Q+A + M+ G++P+ K
Sbjct: 746 DIWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYT 805
Query: 350 LILSACEKENQLNRALEFLIDLERDGF 376
+++ + + +AL +++ G
Sbjct: 806 TLINGWARASLPEKALSCFEEMKLSGL 832
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 79/180 (43%), Gaps = 1/180 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N YT I+HGY A ++ G D T ++ K+G ++ A
Sbjct: 660 NEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVT 719
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+ P + Y ++ + R G + L+++M + V Y + + S
Sbjct: 720 KEMSAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQMKREGVQPDIHTYTSFINACSKA 779
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G+ + A + E ++ G+ P+ + LIN + A +KA + F+ M+ +GL+P D+ V
Sbjct: 780 GDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKP-DRAV 838
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 87/201 (43%), Gaps = 1/201 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y II+ Y ++ + AE + M+ G M+ Y+ G+ FE K
Sbjct: 419 YGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFK 478
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G +YG ++ Y + G + + + +EM+ + + Y L+ G+ +
Sbjct: 479 ECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWA 538
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +FE + GI PD + +I A+ G+ +A + M+K +P+ + I+
Sbjct: 539 NAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPII 598
Query: 353 SACEKENQLNRALEFLIDLER 373
++ ++ +AL+ + D+ R
Sbjct: 599 HGFARKGEMKKALD-VFDMMR 618
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 83/206 (40%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+ Y K ++ A M+ G + T ++++ + K + A FE++
Sbjct: 489 YGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLI 548
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D Y +++ A+ G +DR ++EM Q + + ++ G++ G +
Sbjct: 549 KDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMK 608
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A VF+ ++ +G P LI + +KA M AG+ P++ I+
Sbjct: 609 KALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIM 668
Query: 353 SACEKENQLNRALEFLIDLERDGFMV 378
+A + L +G +
Sbjct: 669 HGYASLGDTGKAFTYFTKLRDEGLQL 694
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G+ ++ I A + + MKR G D T T + SKAG+++ A +T EE+K
Sbjct: 734 YNILIDGWARRGDIWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMK 793
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
+G + ++Y +++ + RA + ++ EM + VY L+
Sbjct: 794 SVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYHCLM 843
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 47/116 (40%), Gaps = 4/116 (3%)
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
N + FE I+ P + L++N Y G +A F+ MR G+EPS
Sbjct: 295 NWQAVVSAFERIK----KPSRKEYGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYT 350
Query: 350 LILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A + AL + ++ +G + L + F + G E +H +E
Sbjct: 351 NLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQE 406
>gi|356533316|ref|XP_003535211.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 918
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 133/281 (47%), Gaps = 19/281 (6%)
Query: 104 KAFVKQIICVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLE 163
K+F K ++ PE N ++ A+ R KP R ++ ++K Y + ++
Sbjct: 246 KSFQK-VLETQPE--NWQAVVTAFERIKKPARKEYGLMVK--------YYARRGDMHHAR 294
Query: 164 ESFEA--------NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
++FE+ + Y+ +IH Y ++ A + + MK G VT +++V +
Sbjct: 295 QTFESMQARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTYSIIVGGF 354
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
+K G A+ F+E K L+ +YGS++ A+ + +DR E L+REM+ Q +
Sbjct: 355 AKMGKADAADHWFKEAKEKLPSLNAVTYGSIIYAHCQTCNMDRAEALVREMEVQGIDAPI 414
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
++Y ++ GY+M GN E VF+ ++ G +P LIN Y G+ KA +
Sbjct: 415 DIYHTMMDGYTMIGNEEKCLIVFDRLKECGFSPSVISYGCLINLYTKIGKVSKALQISKM 474
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
M+ +G++ + K +++++ K A D +DG
Sbjct: 475 MKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGL 515
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 92/197 (46%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+ Y +I G +K ++ A L M G ++ T T ++ Y+ G+ + A + F
Sbjct: 588 TVHTYNALILGLVEKRKMAKAVAILDQMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYF 647
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ G +D +Y +++ + ++G + + +EM A+ + + VY L+ G++
Sbjct: 648 SVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARR 707
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G+ A + + ++ G+ PD +NA AG QKA Q M G++P+ K
Sbjct: 708 GDVWEAADLMQQMRKEGVLPDIHTYTSFVNACCKAGDMQKATEIIQEMEAFGIKPNLKTY 767
Query: 349 ALILSACEKENQLNRAL 365
+++ + + +AL
Sbjct: 768 TTLINGWARASMPEKAL 784
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 103/248 (41%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+E + R + IIHG+ + +++ A M+R G I T +++ + +
Sbjct: 547 KERYRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRKMA 606
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A +++ + G ++ +Y +++ Y G ++ + + + + Y+ALL
Sbjct: 607 KAVAILDQMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFSVLRNEGLEIDVYTYEALL 666
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
+ +G + A V + + I + + +LI+ + G +A Q MRK G+
Sbjct: 667 KSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGVL 726
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P ++AC K + +A E + ++E G + TL + R + E+
Sbjct: 727 PDIHTYTSFVNACCKAGDMQKATEIIQEMEAFGIKPNLKTYTTLINGWARASMPEKALSC 786
Query: 403 LREYGLRE 410
E L E
Sbjct: 787 FEEMKLAE 794
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 78/186 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N YT ++ GY + A ++ G D T ++ K+G ++ A
Sbjct: 623 NEHTYTTLMQGYASLGDTEKAFQYFSVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVT 682
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+ P + Y ++ + R G + L+++M + V Y + +
Sbjct: 683 KEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGVLPDIHTYTSFVNACCKA 742
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G+ + A + + ++ GI P+ + LIN + A +KA + F+ M+ A L+P
Sbjct: 743 GDMQKATEIIQEMEAFGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAELKPDKAAY 802
Query: 349 ALILSA 354
++++
Sbjct: 803 HCLMTS 808
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 82/207 (39%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y II+ + + + AE + M+ +G M+ Y+ GN + F
Sbjct: 378 NAVTYGSIIYAHCQTCNMDRAEALVREMEVQGIDAPIDIYHTMMDGYTMIGNEEKCLIVF 437
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ +K G SYG ++ Y + G + + + + M + + Y L+ G+
Sbjct: 438 DRLKECGFSPSVISYGCLINLYTKIGKVSKALQISKMMKMSGIKHNMKTYSMLINGFLKL 497
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
+ A VFE G+ PD + +I A+ +A + M+K P+ +
Sbjct: 498 KDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTF 557
Query: 349 ALILSACEKENQLNRALEFLIDLERDG 375
I+ + ++ RALE + R G
Sbjct: 558 LPIIHGFARAGEMRRALEIFDMMRRSG 584
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/218 (18%), Positives = 86/218 (39%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E F ++ Y +I+ Y K ++ A MK G + T ++++ + K +
Sbjct: 440 LKECGFSPSVISYGCLINLYTKIGKVSKALQISKMMKMSGIKHNMKTYSMLINGFLKLKD 499
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A FE+ G D Y +++ A+ +DR ++++M + + +
Sbjct: 500 WANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLP 559
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G++ G A +F+ ++ +G P LI + KA M AG
Sbjct: 560 IIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRKMAKAVAILDQMNVAG 619
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMV 378
+ P++ ++ +A ++ L +G +
Sbjct: 620 VGPNEHTYTTLMQGYASLGDTEKAFQYFSVLRNEGLEI 657
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 105/252 (41%), Gaps = 11/252 (4%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR---GFICDQVTLTVMVVMYSKAGN 220
+ +A I Y ++ GY I N E L+ R GF ++ ++ +Y+K G
Sbjct: 408 QGIDAPIDIYHTMMDGY---TMIGNEEKCLIVFDRLKECGFSPSVISYGCLINLYTKIGK 464
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + + +K+ G + ++Y ++ +++ + + + +Y
Sbjct: 465 VSKALQISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNN 524
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ + N + A + + +Q P R +I+ + AG+ ++A F MR++G
Sbjct: 525 IITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSG 584
Query: 341 LEPSDKCV-ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEV 399
P+ ALIL EK ++ +A+ L + G + TL + LG E+
Sbjct: 585 CIPTVHTYNALILGLVEKR-KMAKAVAILDQMNVAGVGPNEHTYTTLMQGYASLGDTEKA 643
Query: 400 EH---VLREYGL 408
VLR GL
Sbjct: 644 FQYFSVLRNEGL 655
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/149 (20%), Positives = 69/149 (46%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E E ++ Y ++ K ++Q+A M + + +++ +++ G+
Sbjct: 650 LRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGD 709
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + ++++ G D +Y S V A +AG + + +++EM+A + + Y
Sbjct: 710 VWEAADLMQQMRKEGVLPDIHTYTSFVNACCKAGDMQKATEIIQEMEAFGIKPNLKTYTT 769
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPD 309
L+ G++ E A FE ++ A + PD
Sbjct: 770 LINGWARASMPEKALSCFEEMKLAELKPD 798
>gi|356577532|ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 932
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 128/273 (46%), Gaps = 3/273 (1%)
Query: 104 KAFVKQIICVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLE 163
K+F ++I+ PE N ++ A+ R KP R ++ ++K + + ++
Sbjct: 256 KSF-QKILETQPE--NWQAVVTAFERIKKPARKEYGLMVKYYGRRGDMHHARQTFESMRA 312
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
E + Y+ +IH Y ++ A + + MK G VT +++V ++K GN
Sbjct: 313 RGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGNADA 372
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A+ FEE K L+ YG ++ A+ + +DR E L+REM+ Q + ++Y ++
Sbjct: 373 ADHWFEEAKEKLPSLNAVIYGGIIYAHCQICNMDRAEALVREMEEQGIDAPIDIYHTMMD 432
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
GY+M GN E VF+ ++ G P LIN Y G+ KA + M+ +G++
Sbjct: 433 GYTMIGNEEKCLIVFDRLKECGFFPSVISYGCLINLYTKVGKVSKALEISKMMKMSGIKH 492
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+ K +++++ K A D +DG
Sbjct: 493 NMKTYSMLINGFLKLKDWANAFSVFEDFTKDGL 525
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 103/224 (45%), Gaps = 1/224 (0%)
Query: 170 IRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFE 229
+ Y +I G +K Q+ A L M G ++ T T ++ Y+ G+ + A + F
Sbjct: 599 VHTYNALILGLVEKRQMTKAVAILDEMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFT 658
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
++ G +D +Y +++ + ++G + + +EM A+ + + VY L+ G++ G
Sbjct: 659 VLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRG 718
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
+ A + + ++ G+ PD INA AG QKA Q M +G++P+ K
Sbjct: 719 DVWEAADLMQQMRKEGLLPDIHTYTSFINACCKAGDMQKATEIIQEMEASGIKPNLKTYT 778
Query: 350 LILSACEKENQLNRALEFLIDLERDGFMVGKEA-SCTLAAWFKR 392
+++ + + +AL +++ GF K C + + R
Sbjct: 779 TLINGWARASMPEKALSCFEEMKLAGFKPDKAVYHCLVTSLLSR 822
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 101/246 (41%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+E R + IIHG+ + +++ A M+R G I T +++ + +
Sbjct: 557 KERHRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRQMT 616
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A +E+ + G ++ +Y +++ Y G ++ + + + + Y+ALL
Sbjct: 617 KAVAILDEMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALL 676
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
+ +G + A V + + I + + +LI+ + G +A Q MRK GL
Sbjct: 677 KSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGLL 736
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P ++AC K + +A E + ++E G + TL + R + E+
Sbjct: 737 PDIHTYTSFINACCKAGDMQKATEIIQEMEASGIKPNLKTYTTLINGWARASMPEKALSC 796
Query: 403 LREYGL 408
E L
Sbjct: 797 FEEMKL 802
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 78/180 (43%), Gaps = 1/180 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N YT ++ GY + A ++ G D T ++ K+G ++ A
Sbjct: 633 NEHTYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVT 692
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+ P + Y ++ + R G + L+++M + + Y + +
Sbjct: 693 KEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGLLPDIHTYTSFINACCKA 752
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G+ + A + + ++ +GI P+ + LIN + A +KA + F+ M+ AG +P DK V
Sbjct: 753 GDMQKATEIIQEMEASGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAGFKP-DKAV 811
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 107/253 (42%), Gaps = 11/253 (4%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR---GFICDQVTLTVMVVMYSKAG 219
E+ +A I Y ++ GY I N E L+ R GF ++ ++ +Y+K G
Sbjct: 417 EQGIDAPIDIYHTMMDGY---TMIGNEEKCLIVFDRLKECGFFPSVISYGCLINLYTKVG 473
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ A E + +K+ G + ++Y ++ +++ + + + +Y
Sbjct: 474 KVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYN 533
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
++ + GN + A + +Q P R +I+ + AG+ ++A F MR++
Sbjct: 534 NIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRS 593
Query: 340 GLEPSDKCV-ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
G P+ ALIL EK Q+ +A+ L ++ G + TL + LG E+
Sbjct: 594 GCIPTVHTYNALILGLVEKR-QMTKAVAILDEMNVAGVGPNEHTYTTLMQGYASLGDTEK 652
Query: 399 VEH---VLREYGL 408
VLR GL
Sbjct: 653 AFQYFTVLRNEGL 665
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 82/203 (40%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y II+ + + + AE + M+ +G M+ Y+ GN + F+ +K
Sbjct: 392 YGGIIYAHCQICNMDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLK 451
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G SYG ++ Y + G + + + + M + + Y L+ G+ +
Sbjct: 452 ECGFFPSVISYGCLINLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWA 511
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A VFE G+ PD + +I A+ G +A + M+K P+ + I+
Sbjct: 512 NAFSVFEDFTKDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPII 571
Query: 353 SACEKENQLNRALEFLIDLERDG 375
+ ++ RALE + R G
Sbjct: 572 HGFARAGEMRRALEIFDMMRRSG 594
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 87/218 (39%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E F ++ Y +I+ Y K ++ A MK G + T ++++ + K +
Sbjct: 450 LKECGFFPSVISYGCLINLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKD 509
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A FE+ G D Y +++ A+ G +DR ++R+M + + +
Sbjct: 510 WANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLP 569
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G++ G A +F+ ++ +G P LI Q KA M AG
Sbjct: 570 IIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVAG 629
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMV 378
+ P++ ++ +A ++ L +G +
Sbjct: 630 VGPNEHTYTTLMQGYASLGDTEKAFQYFTVLRNEGLEI 667
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 73/159 (45%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E E ++ Y ++ K ++Q+A M + + +++ +++ G+
Sbjct: 660 LRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGD 719
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + ++++ G D +Y S + A +AG + + +++EM+A + + Y
Sbjct: 720 VWEAADLMQQMRKEGLLPDIHTYTSFINACCKAGDMQKATEIIQEMEASGIKPNLKTYTT 779
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
L+ G++ E A FE ++ AG PD + L+ +
Sbjct: 780 LINGWARASMPEKALSCFEEMKLAGFKPDKAVYHCLVTS 818
>gi|297806463|ref|XP_002871115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316952|gb|EFH47374.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 942
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 127/265 (47%), Gaps = 16/265 (6%)
Query: 119 NLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFE--------ANI 170
N +++A+ + KP R ++ ++K Y + ++ E+FE
Sbjct: 294 NWQAVISAFEKINKPSRTEFGLMVK--------FYGRRGDMHRARETFERMRARGITPTS 345
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
R YT +IH Y ++ A + + MK G VT +V+V +SKAGN + A+ F+E
Sbjct: 346 RIYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGNAEAADHWFDE 405
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
K + + L+ YG ++ A+ + ++R E L+REM+ + + +Y ++ GY+M +
Sbjct: 406 AKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVAD 465
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
+ VF+ ++ G TP LIN Y G+ KA + M++ G++ + K ++
Sbjct: 466 EKKGLIVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSM 525
Query: 351 ILSACEKENQLNRALEFLIDLERDG 375
+++ K A D+ ++G
Sbjct: 526 MINGFVKLKDWANAFAVFEDMVKEG 550
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 102/230 (44%), Gaps = 1/230 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+ + +I+G +K Q++ A L M G ++ T T ++ Y+ G+ A E F
Sbjct: 624 TVHTFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYF 683
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ G +D +Y +++ A ++G + + +EM A+ + S VY L+ G++
Sbjct: 684 TRLQNEGLEVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARR 743
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G+ A + + ++ G+ PD I+A AG +A + M G++P+ K
Sbjct: 744 GDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTY 803
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEA-SCTLAAWFKRLGVVE 397
++ + + +AL +++ G K C L + R + E
Sbjct: 804 TTLIKGWARASLPEKALSCYEEMKAVGLKPDKAVYHCLLTSLLSRASIAE 853
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 98/228 (42%)
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
R + II+G+ K ++ + M+R G + T ++ + ++ A E +E
Sbjct: 591 RTFMPIINGFAKSGDMRRSLEVFDMMRRCGCVPTVHTFNALINGLVEKRQMEKAVEILDE 650
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
+ L G ++ +Y ++ Y G + + + + V Y+ALL+ +G
Sbjct: 651 MTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLEVDIFTYEALLKACCKSGR 710
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
+ A V + + I ++ + +LI+ + G +A Q M+K G++P
Sbjct: 711 MQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTS 770
Query: 351 ILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
+SAC K +NRA + + ++E G + TL + R + E+
Sbjct: 771 FISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEK 818
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 77/181 (42%), Gaps = 1/181 (0%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
AN YTKI+ GY A ++ G D T ++ K+G ++ A
Sbjct: 658 ANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLEVDIFTYEALLKACCKSGRMQSALAV 717
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
+E+ P + Y ++ + R G + L+++M + V Y + + S
Sbjct: 718 TKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSK 777
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G+ A + E ++ G+ P+ + LI + A +KA + ++ M+ GL+P DK
Sbjct: 778 AGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAVGLKP-DKA 836
Query: 348 V 348
V
Sbjct: 837 V 837
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 88/218 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E F + Y +I+ Y K +I A MK G + T ++M+ + K +
Sbjct: 476 LKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKD 535
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A FE++ G D Y +++ A+ G +DR ++EM + +
Sbjct: 536 WANAFAVFEDMVKEGMKPDVILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMP 595
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G++ +G+ + VF+ ++ G P LIN Q +KA M AG
Sbjct: 596 IINGFAKSGDMRRSLEVFDMMRRCGCVPTVHTFNALINGLVEKRQMEKAVEILDEMTLAG 655
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMV 378
+ ++ I+ +A E+ L+ +G V
Sbjct: 656 VSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLEV 693
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 99/235 (42%), Gaps = 6/235 (2%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR---GFICDQVTLTVMVVMYSKAG 219
EE +A I Y ++ GY + + + L+ KR GF VT ++ +Y+K G
Sbjct: 443 EEGIDAPIAIYHTMMDGY---TMVADEKKGLIVFKRLKECGFTPTVVTYGCLINLYTKVG 499
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ A E +K G + ++Y M+ +V+ + +M + + +Y
Sbjct: 500 KISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYN 559
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
++ + GN + A + + +Q P R +IN + +G +++ F MR+
Sbjct: 560 NIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKSGDMRRSLEVFDMMRRC 619
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
G P+ +++ ++ Q+ +A+E L ++ G + + + +G
Sbjct: 620 GCVPTVHTFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVG 674
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 85/207 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y KII+ + + ++ AE + M+ G M+ Y+ + K F
Sbjct: 414 NASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLIVF 473
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ +K G +YG ++ Y + G + + + R M + V + Y ++ G+
Sbjct: 474 KRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKL 533
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
+ A VFE + G+ PD + +I A+ G +A + M+K P+ +
Sbjct: 534 KDWANAFAVFEDMVKEGMKPDVILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTF 593
Query: 349 ALILSACEKENQLNRALEFLIDLERDG 375
I++ K + R+LE + R G
Sbjct: 594 MPIINGFAKSGDMRRSLEVFDMMRRCG 620
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 83/187 (44%), Gaps = 6/187 (3%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E E +I Y ++ K ++Q+A M R + +++ +++ G+
Sbjct: 686 LQNEGLEVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGD 745
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + +++K G D +Y S + A +AG ++R + EM+A V + Y
Sbjct: 746 VWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTT 805
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAY------TAFQ 334
L++G++ E A +E ++ G+ PD + L+ + +AY T +
Sbjct: 806 LIKGWARASLPEKALSCYEEMKAVGLKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICK 865
Query: 335 NMRKAGL 341
M +AGL
Sbjct: 866 EMVEAGL 872
>gi|168004269|ref|XP_001754834.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693938|gb|EDQ80288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 504
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 141/298 (47%), Gaps = 10/298 (3%)
Query: 106 FVKQIICVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEES 165
+K C+ ET + + LLAA+ R ++ +A+ L H + +E
Sbjct: 108 LMKDFQCLPTET-SFNVLLAAYSRGVQLEKAEKLF---------HEMKESNYSPGTVEWM 157
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
+ I Y + GK ++ AE+T M+++G + T T+M+ +Y KA A+
Sbjct: 158 IFSGIATYNTYLEVLGKSGRLSQAEDTFRDMQKQGILPAVNTFTIMINIYGKAYYSDKAD 217
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+ F ++ P + +Y +++ A+ R G R E + E+ + Y ALL Y
Sbjct: 218 DLFRSMRKALCPPNLYTYTALMNAHAREGNCVRAEEIFAELQSVGFIPDVYTYNALLEAY 277
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
S + GA+ VF+A+ AG+ PD +LI+A+ AG + A + +M++AG +P+
Sbjct: 278 SRGEHPTGAKEVFQAMVEAGVRPDQVSYNILIDAFGRAGLTADAQAVYDSMKEAGFKPTM 337
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
K L+LS+ K ++ A + ++E G +L + + G ++E+E +L
Sbjct: 338 KSHMLLLSSYAKAGKVTEAERLVREIENSGVKPDTFMFNSLLSAYGNSGRIDEMESLL 395
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 102/236 (43%)
Query: 133 PRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENT 192
P + A+L+ EHP + A++E + Y +I +G+ +A+
Sbjct: 265 PDVYTYNALLEAYSRGEHPTGAKEVFQAMVEAGVRPDQVSYNILIDAFGRAGLTADAQAV 324
Query: 193 LLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVR 252
+MK GF + +++ Y+KAG + AE EI+ G D + S++ AY
Sbjct: 325 YDSMKEAGFKPTMKSHMLLLSSYAKAGKVTEAERLVREIENSGVKPDTFMFNSLLSAYGN 384
Query: 253 AGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARM 312
+G +D E LL M + L+ Y+ G E A+ VF +++ G+TPD
Sbjct: 385 SGRIDEMESLLESMVSSVAKPDISTLNTLINAYAQGGYIEKAEEVFNSLESKGLTPDVMS 444
Query: 313 CALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFL 368
L+ AY +K + FQ M KAG P + LS+C Q+ + +
Sbjct: 445 WTSLMGAYAQRKLFRKCVSIFQKMVKAGCIPDRATAKVFLSSCRSPEQVKEVTDMI 500
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 83/178 (46%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y ++ Y + A+ AM G DQV+ +++ + +AG A+
Sbjct: 263 FIPDVYTYNALLEAYSRGEHPTGAKEVFQAMVEAGVRPDQVSYNILIDAFGRAGLTADAQ 322
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
++ +K G +S+ ++ +Y +AG + E L+RE++ V + ++ +LL Y
Sbjct: 323 AVYDSMKEAGFKPTMKSHMLLLSSYAKAGKVTEAERLVREIENSGVKPDTFMFNSLLSAY 382
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
+G + + + E++ + PD LINAY G +KA F ++ GL P
Sbjct: 383 GNSGRIDEMESLLESMVSSVAKPDISTLNTLINAYAQGGYIEKAEEVFNSLESKGLTP 440
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 98/242 (40%), Gaps = 9/242 (3%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQV---------TLTVMVVMYSKAGNLKM 223
+ ++ Y + +Q++ AE MK + V T + + K+G L
Sbjct: 121 FNVLLAAYSRGVQLEKAEKLFHEMKESNYSPGTVEWMIFSGIATYNTYLEVLGKSGRLSQ 180
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
AE+TF +++ G ++ M+ Y +A D+ + L R M Y AL+
Sbjct: 181 AEDTFRDMQKQGILPAVNTFTIMINIYGKAYYSDKADDLFRSMRKALCPPNLYTYTALMN 240
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
++ GN A+ +F +Q G PD L+ AY A FQ M +AG+ P
Sbjct: 241 AHAREGNCVRAEEIFAELQSVGFIPDVYTYNALLEAYSRGEHPTGAKEVFQAMVEAGVRP 300
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+++ A + A ++ GF ++ L + + + G V E E ++
Sbjct: 301 DQVSYNILIDAFGRAGLTADAQAVYDSMKEAGFKPTMKSHMLLLSSYAKAGKVTEAERLV 360
Query: 404 RE 405
RE
Sbjct: 361 RE 362
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 95/208 (45%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ YT +++ + ++ AE ++ GFI D T ++ YS+ + A+E F
Sbjct: 231 NLYTYTALMNAHAREGNCVRAEEIFAELQSVGFIPDVYTYNALLEAYSRGEHPTGAKEVF 290
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ + G D+ SY ++ A+ RAG+ + + M + + LL Y+
Sbjct: 291 QAMVEAGVRPDQVSYNILIDAFGRAGLTADAQAVYDSMKEAGFKPTMKSHMLLLSSYAKA 350
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G A+R+ I+ +G+ PD M L++AY +G+ + + ++M + +P +
Sbjct: 351 GKVTEAERLVREIENSGVKPDTFMFNSLLSAYGNSGRIDEMESLLESMVSSVAKPDISTL 410
Query: 349 ALILSACEKENQLNRALEFLIDLERDGF 376
+++A + + +A E LE G
Sbjct: 411 NTLINAYAQGGYIEKAEEVFNSLESKGL 438
>gi|297743996|emb|CBI36966.3| unnamed protein product [Vitis vinifera]
Length = 730
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 113/238 (47%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L E +I Y ++ K Q+ A + M R+ + + VT + ++ Y+KAG
Sbjct: 203 MLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGR 262
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A F E+K LD+ SY +++ Y + G + + +EM++ + + Y A
Sbjct: 263 LDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNA 322
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL GY G E +RVFE ++ I P+ + LI+ Y G Q+A F+ +KAG
Sbjct: 323 LLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAG 382
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
L+ + ++ A K + A+ FL ++ ++G ++ F R G+VE+
Sbjct: 383 LKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGIVED 440
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 89/198 (44%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y+ +I GY K ++ A N MK D+V+ ++ +Y+K G + A
Sbjct: 246 NVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVC 305
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E++ G D +Y +++ Y + G + + + EM A+ ++ Y L+ YS
Sbjct: 306 KEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKG 365
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A VF + AG+ D + + LI+A G + A + M K G+ P+
Sbjct: 366 GLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTY 425
Query: 349 ALILSACEKENQLNRALE 366
I+ A + + A E
Sbjct: 426 NSIIDAFGRSGIVEDATE 443
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 88/214 (41%), Gaps = 7/214 (3%)
Query: 200 GFICDQVTLTVMVVMYSKAG-NLKMAEETFEEIKLLGEPL------DKRSYGSMVMAYVR 252
G + VT ++ K G + A E F+E+ L E L D +Y +++ A +
Sbjct: 165 GLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMNLFSEMLYRGIEQDIFTYNTLLDAVCK 224
Query: 253 AGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARM 312
G +D ++ EM + + Y ++ GY+ G + A +F ++FA I D
Sbjct: 225 GGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVS 284
Query: 313 CALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLE 372
L++ Y G+ ++A + M +G++ +L K+ + +++
Sbjct: 285 YNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMK 344
Query: 373 RDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREY 406
+ TL + + G+ +E V RE+
Sbjct: 345 AERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREF 378
>gi|224113413|ref|XP_002316488.1| predicted protein [Populus trichocarpa]
gi|222865528|gb|EEF02659.1| predicted protein [Populus trichocarpa]
Length = 941
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 151/328 (46%), Gaps = 19/328 (5%)
Query: 86 EEQKQAISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQL 145
E+ K S++ + KAF ++++ PE N +++A+ R KP R ++
Sbjct: 248 EDGKDYRSKWHEEREGSTKAF-RKVLDTQPE--NWQAVVSAFERIKKPSR-------REF 297
Query: 146 KLMEHPLYLQVAELALLEESFEA--------NIRDYTKIIHGYGKKMQIQNAENTLLAMK 197
LM Y + ++ ++FE+ + YT +IH Y ++ A + + M
Sbjct: 298 GLMV-GYYARRGDMHRARQTFESMRARGIDPSSHVYTSLIHAYAVGRDMEEALSCVRKMN 356
Query: 198 RRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLD 257
G VT +++V ++K GN + A+ F++ K L+ YG+++ AY +A +D
Sbjct: 357 EEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKERHTNLNAYIYGNIIYAYCQACNMD 416
Query: 258 RGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
R E L+REM+ + + ++Y ++ GY+M N E VF+ ++ G P LI
Sbjct: 417 RAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLKECGFAPSVITYGCLI 476
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
N Y G+ KA + M+ G++ + K +++++ K A D+ +DG
Sbjct: 477 NMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVIKDGLK 536
Query: 378 VGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ F +G ++ H+++E
Sbjct: 537 PDVVLYNNIIKAFCGMGNMDRAIHMVKE 564
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 103/229 (44%), Gaps = 1/229 (0%)
Query: 170 IRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFE 229
+ + ++ G +K +++ A L M G D+ T T ++ Y+ G+ A E F
Sbjct: 609 VHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFT 668
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
+++ G LD +Y +++ A ++G + + REM+AQ++ + VY L+ G++ G
Sbjct: 669 KMRNEGLQLDVFTYEALLKACCKSGRMQSALAVTREMNAQKIPRNTFVYNILIDGWARRG 728
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
+ A + + + G+ PD INA AG +A + M AG++P+ K
Sbjct: 729 DIWEAADLMQQMNQEGVQPDIHTYTSFINACCKAGDMLRATKTMEEMEAAGVKPNVKTYT 788
Query: 350 LILSACEKENQLNRALEFLIDLERDGFMVGKEA-SCTLAAWFKRLGVVE 397
++ + +AL +L+ G K C + + R V E
Sbjct: 789 TLIHGWANASLPEKALSCFEELKLAGLKPDKAVYHCLMTSLLSRATVAE 837
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 107/236 (45%), Gaps = 8/236 (3%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR---GFICDQVTLTVMVVMYSKAG 219
EE +A + Y ++ GY I+N E L+ KR GF +T ++ MY+K G
Sbjct: 427 EEGIDAPLDIYHTMMDGY---TMIRNEEKCLIVFKRLKECGFAPSVITYGCLINMYTKIG 483
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ A E + +K +G + ++Y ++ +++ + ++ + +Y
Sbjct: 484 KVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVIKDGLKPDVVLYN 543
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
+++ + GN + A + + +Q P +R +I+ + AG+ ++A F MR++
Sbjct: 544 NIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRS 603
Query: 340 GLEPSDKCV-ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
G P+ AL+L EK ++ +A+E L ++ G + T+ + LG
Sbjct: 604 GCIPTVHTFNALVLGLVEKR-KMEKAVEILDEMALAGVSPDEHTYTTIMHGYAALG 658
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 93/240 (38%), Gaps = 35/240 (14%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E F ++ Y +I+ Y K ++ A MK G + T ++++ + K +
Sbjct: 460 LKECGFAPSVITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKD 519
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A FE++ G D Y +++ A+ G +DR +++EM + S +
Sbjct: 520 WTNAFAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMP 579
Query: 281 LLRGYSMNGNSEGAQRVFEAIQ-----------------------------------FAG 305
++ G++ G A +F+ ++ AG
Sbjct: 580 IIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAG 639
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
++PD +++ Y G + KA+ F MR GL+ +L AC K ++ AL
Sbjct: 640 VSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQSAL 699
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 82/203 (40%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y II+ Y + + AE + M+ G M+ Y+ N + F+ +K
Sbjct: 402 YGNIIYAYCQACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLK 461
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G +YG ++ Y + G + + + + M + + + Y L+ G+ +
Sbjct: 462 ECGFAPSVITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWT 521
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A VFE + G+ PD + +I A+ G +A + M+K P+ + I+
Sbjct: 522 NAFAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPII 581
Query: 353 SACEKENQLNRALEFLIDLERDG 375
+ ++ RALE + R G
Sbjct: 582 HGFARAGEMRRALEIFDMMRRSG 604
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 73/167 (43%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
E + ++ Y ++ K ++Q+A M + + +++ +++ G++
Sbjct: 673 EGLQLDVFTYEALLKACCKSGRMQSALAVTREMNAQKIPRNTFVYNILIDGWARRGDIWE 732
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A + +++ G D +Y S + A +AG + R + EM+A V + Y L+
Sbjct: 733 AADLMQQMNQEGVQPDIHTYTSFINACCKAGDMLRATKTMEEMEAAGVKPNVKTYTTLIH 792
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAY 330
G++ E A FE ++ AG+ PD + L+ + +AY
Sbjct: 793 GWANASLPEKALSCFEELKLAGLKPDKAVYHCLMTSLLSRATVAEAY 839
>gi|15983487|gb|AAL11611.1|AF424618_1 AT5g04810/MUK11_13 [Arabidopsis thaliana]
Length = 950
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 126/265 (47%), Gaps = 16/265 (6%)
Query: 119 NLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFE--------ANI 170
N +++A+ + KP R ++ ++K Y + ++ E+FE
Sbjct: 291 NWQAVISAFEKISKPSRTEFGLMVK--------FYGRRGDMHRARETFERMRARGITPTS 342
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
R YT +IH Y + A + + MK G VT +V+V +SKAG+ + A+ F+E
Sbjct: 343 RIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDE 402
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
K + + L+ YG ++ A+ + ++R E L+REM+ + + +Y ++ GY+M +
Sbjct: 403 AKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVAD 462
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
+ VF+ ++ G TP LIN Y G+ KA + M++ G++ + K ++
Sbjct: 463 EKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSM 522
Query: 351 ILSACEKENQLNRALEFLIDLERDG 375
+++ K A D+ ++G
Sbjct: 523 MINGFVKLKDWANAFAVFEDMVKEG 547
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 102/230 (44%), Gaps = 1/230 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+ + +I+G +K Q++ A L M G ++ T T ++ Y+ G+ A E F
Sbjct: 621 TVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYF 680
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ G +D +Y +++ A ++G + + +EM A+ + S VY L+ G++
Sbjct: 681 TRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARR 740
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G+ A + + ++ G+ PD I+A AG +A + M G++P+ K
Sbjct: 741 GDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTY 800
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEA-SCTLAAWFKRLGVVE 397
++ + + +AL +++ G K C L + R + E
Sbjct: 801 TTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAE 850
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 98/228 (42%)
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
R + IIHGY K ++ + M+R G + T ++ + ++ A E +E
Sbjct: 588 RTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDE 647
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
+ L G ++ +Y ++ Y G + + + + V Y+ALL+ +G
Sbjct: 648 MTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGR 707
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
+ A V + + I ++ + +LI+ + G +A Q M+K G++P
Sbjct: 708 MQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTS 767
Query: 351 ILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
+SAC K +NRA + + ++E G + TL + R + E+
Sbjct: 768 FISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEK 815
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 88/218 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E F + Y +I+ Y K +I A MK G + T ++M+ + K +
Sbjct: 473 LKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKD 532
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A FE++ G D Y +++ A+ G +DR ++EM + +
Sbjct: 533 WANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMP 592
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ GY+ +G+ + VF+ ++ G P LIN Q +KA M AG
Sbjct: 593 IIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAG 652
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMV 378
+ ++ I+ +A E+ L+ +G V
Sbjct: 653 VSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDV 690
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 77/181 (42%), Gaps = 1/181 (0%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
AN YTKI+ GY A ++ G D T ++ K+G ++ A
Sbjct: 655 ANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAV 714
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
+E+ P + Y ++ + R G + L+++M + V Y + + S
Sbjct: 715 TKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSK 774
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G+ A + E ++ G+ P+ + LI + A +KA + ++ M+ G++P DK
Sbjct: 775 AGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKP-DKA 833
Query: 348 V 348
V
Sbjct: 834 V 834
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 85/207 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y KII+ + + ++ AE + M+ G M+ Y+ + K F
Sbjct: 411 NASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVF 470
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ +K G +YG ++ Y + G + + + R M + V + Y ++ G+
Sbjct: 471 KRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKL 530
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
+ A VFE + G+ PD + +I+A+ G +A + M+K P+ +
Sbjct: 531 KDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTF 590
Query: 349 ALILSACEKENQLNRALEFLIDLERDG 375
I+ K + R+LE + R G
Sbjct: 591 MPIIHGYAKSGDMRRSLEVFDMMRRCG 617
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 88/201 (43%), Gaps = 7/201 (3%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E + +I Y ++ K ++Q+A M R + +++ +++ G+
Sbjct: 683 LQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGD 742
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + +++K G D +Y S + A +AG ++R + EM+A V + Y
Sbjct: 743 VWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTT 802
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAY------TAFQ 334
L++G++ E A +E ++ GI PD + L+ + +AY T +
Sbjct: 803 LIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICK 862
Query: 335 NMRKAGLEPSDKCVALILSAC 355
M +AGL D A+ S C
Sbjct: 863 EMVEAGL-IVDMGTAVHWSKC 882
>gi|9758456|dbj|BAB08985.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
Length = 949
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 126/265 (47%), Gaps = 16/265 (6%)
Query: 119 NLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFE--------ANI 170
N +++A+ + KP R ++ ++K Y + ++ E+FE
Sbjct: 293 NWQAVISAFEKISKPSRTEFGLMVK--------FYGRRGDMHRARETFERMRARGITPTS 344
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
R YT +IH Y + A + + MK G VT +V+V +SKAG+ + A+ F+E
Sbjct: 345 RIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDE 404
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
K + + L+ YG ++ A+ + ++R E L+REM+ + + +Y ++ GY+M +
Sbjct: 405 AKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVAD 464
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
+ VF+ ++ G TP LIN Y G+ KA + M++ G++ + K ++
Sbjct: 465 EKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSM 524
Query: 351 ILSACEKENQLNRALEFLIDLERDG 375
+++ K A D+ ++G
Sbjct: 525 MINGFVKLKDWANAFAVFEDMVKEG 549
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 97/228 (42%), Gaps = 3/228 (1%)
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
R + IIHGY K ++ + M+R G + T ++ + + A E +E
Sbjct: 590 RTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLI---NGLVEKRQAVEILDE 646
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
+ L G ++ +Y ++ Y G + + + + V Y+ALL+ +G
Sbjct: 647 MTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGR 706
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
+ A V + + I ++ + +LI+ + G +A Q M+K G++P
Sbjct: 707 MQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTS 766
Query: 351 ILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
+SAC K +NRA + + ++E G + TL + R + E+
Sbjct: 767 FISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEK 814
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 100/230 (43%), Gaps = 4/230 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+ + +I+G +K Q A L M G ++ T T ++ Y+ G+ A E F
Sbjct: 623 TVHTFNGLINGLVEKRQ---AVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYF 679
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ G +D +Y +++ A ++G + + +EM A+ + S VY L+ G++
Sbjct: 680 TRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARR 739
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G+ A + + ++ G+ PD I+A AG +A + M G++P+ K
Sbjct: 740 GDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTY 799
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEA-SCTLAAWFKRLGVVE 397
++ + + +AL +++ G K C L + R + E
Sbjct: 800 TTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAE 849
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 77/181 (42%), Gaps = 1/181 (0%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
AN YTKI+ GY A ++ G D T ++ K+G ++ A
Sbjct: 654 ANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAV 713
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
+E+ P + Y ++ + R G + L+++M + V Y + + S
Sbjct: 714 TKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSK 773
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G+ A + E ++ G+ P+ + LI + A +KA + ++ M+ G++P DK
Sbjct: 774 AGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKP-DKA 832
Query: 348 V 348
V
Sbjct: 833 V 833
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 85/207 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y KII+ + + ++ AE + M+ G M+ Y+ + K F
Sbjct: 413 NASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVF 472
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ +K G +YG ++ Y + G + + + R M + V + Y ++ G+
Sbjct: 473 KRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKL 532
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
+ A VFE + G+ PD + +I+A+ G +A + M+K P+ +
Sbjct: 533 KDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTF 592
Query: 349 ALILSACEKENQLNRALEFLIDLERDG 375
I+ K + R+LE + R G
Sbjct: 593 MPIIHGYAKSGDMRRSLEVFDMMRRCG 619
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 88/218 (40%), Gaps = 3/218 (1%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E F + Y +I+ Y K +I A MK G + T ++M+ + K +
Sbjct: 475 LKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKD 534
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A FE++ G D Y +++ A+ G +DR ++EM + +
Sbjct: 535 WANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMP 594
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ GY+ +G+ + VF+ ++ G P LIN + ++A M AG
Sbjct: 595 IIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLV---EKRQAVEILDEMTLAG 651
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMV 378
+ ++ I+ +A E+ L+ +G V
Sbjct: 652 VSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDV 689
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 88/201 (43%), Gaps = 7/201 (3%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E + +I Y ++ K ++Q+A M R + +++ +++ G+
Sbjct: 682 LQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGD 741
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + +++K G D +Y S + A +AG ++R + EM+A V + Y
Sbjct: 742 VWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTT 801
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAY------TAFQ 334
L++G++ E A +E ++ GI PD + L+ + +AY T +
Sbjct: 802 LIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICK 861
Query: 335 NMRKAGLEPSDKCVALILSAC 355
M +AGL D A+ S C
Sbjct: 862 EMVEAGL-IVDMGTAVHWSKC 881
>gi|42567647|ref|NP_568141.2| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|122223689|sp|Q0WMY5.1|PP365_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g04810, chloroplastic; AltName: Full=Maize PPR4
homolog; Short=AtPPR4; Flags: Precursor
gi|110739199|dbj|BAF01515.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
gi|332003406|gb|AED90789.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 952
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 126/265 (47%), Gaps = 16/265 (6%)
Query: 119 NLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFE--------ANI 170
N +++A+ + KP R ++ ++K Y + ++ E+FE
Sbjct: 293 NWQAVISAFEKISKPSRTEFGLMVK--------FYGRRGDMHRARETFERMRARGITPTS 344
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
R YT +IH Y + A + + MK G VT +V+V +SKAG+ + A+ F+E
Sbjct: 345 RIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDE 404
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
K + + L+ YG ++ A+ + ++R E L+REM+ + + +Y ++ GY+M +
Sbjct: 405 AKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVAD 464
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
+ VF+ ++ G TP LIN Y G+ KA + M++ G++ + K ++
Sbjct: 465 EKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSM 524
Query: 351 ILSACEKENQLNRALEFLIDLERDG 375
+++ K A D+ ++G
Sbjct: 525 MINGFVKLKDWANAFAVFEDMVKEG 549
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 102/230 (44%), Gaps = 1/230 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+ + +I+G +K Q++ A L M G ++ T T ++ Y+ G+ A E F
Sbjct: 623 TVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYF 682
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ G +D +Y +++ A ++G + + +EM A+ + S VY L+ G++
Sbjct: 683 TRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARR 742
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G+ A + + ++ G+ PD I+A AG +A + M G++P+ K
Sbjct: 743 GDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTY 802
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEA-SCTLAAWFKRLGVVE 397
++ + + +AL +++ G K C L + R + E
Sbjct: 803 TTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAE 852
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 98/228 (42%)
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
R + IIHGY K ++ + M+R G + T ++ + ++ A E +E
Sbjct: 590 RTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDE 649
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
+ L G ++ +Y ++ Y G + + + + V Y+ALL+ +G
Sbjct: 650 MTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGR 709
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
+ A V + + I ++ + +LI+ + G +A Q M+K G++P
Sbjct: 710 MQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTS 769
Query: 351 ILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
+SAC K +NRA + + ++E G + TL + R + E+
Sbjct: 770 FISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEK 817
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 88/218 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E F + Y +I+ Y K +I A MK G + T ++M+ + K +
Sbjct: 475 LKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKD 534
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A FE++ G D Y +++ A+ G +DR ++EM + +
Sbjct: 535 WANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMP 594
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ GY+ +G+ + VF+ ++ G P LIN Q +KA M AG
Sbjct: 595 IIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAG 654
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMV 378
+ ++ I+ +A E+ L+ +G V
Sbjct: 655 VSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDV 692
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 77/181 (42%), Gaps = 1/181 (0%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
AN YTKI+ GY A ++ G D T ++ K+G ++ A
Sbjct: 657 ANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAV 716
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
+E+ P + Y ++ + R G + L+++M + V Y + + S
Sbjct: 717 TKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSK 776
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G+ A + E ++ G+ P+ + LI + A +KA + ++ M+ G++P DK
Sbjct: 777 AGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKP-DKA 835
Query: 348 V 348
V
Sbjct: 836 V 836
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 85/207 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y KII+ + + ++ AE + M+ G M+ Y+ + K F
Sbjct: 413 NASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVF 472
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ +K G +YG ++ Y + G + + + R M + V + Y ++ G+
Sbjct: 473 KRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKL 532
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
+ A VFE + G+ PD + +I+A+ G +A + M+K P+ +
Sbjct: 533 KDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTF 592
Query: 349 ALILSACEKENQLNRALEFLIDLERDG 375
I+ K + R+LE + R G
Sbjct: 593 MPIIHGYAKSGDMRRSLEVFDMMRRCG 619
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 88/201 (43%), Gaps = 7/201 (3%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E + +I Y ++ K ++Q+A M R + +++ +++ G+
Sbjct: 685 LQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGD 744
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + +++K G D +Y S + A +AG ++R + EM+A V + Y
Sbjct: 745 VWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTT 804
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAY------TAFQ 334
L++G++ E A +E ++ GI PD + L+ + +AY T +
Sbjct: 805 LIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICK 864
Query: 335 NMRKAGLEPSDKCVALILSAC 355
M +AGL D A+ S C
Sbjct: 865 EMVEAGL-IVDMGTAVHWSKC 884
>gi|7413543|emb|CAB86023.1| putative protein [Arabidopsis thaliana]
Length = 880
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 126/265 (47%), Gaps = 16/265 (6%)
Query: 119 NLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFE--------ANI 170
N +++A+ + KP R ++ ++K Y + ++ E+FE
Sbjct: 293 NWQAVISAFEKISKPSRTEFGLMVK--------FYGRRGDMHRARETFERMRARGITPTS 344
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
R YT +IH Y + A + + MK G VT +V+V +SKAG+ + A+ F+E
Sbjct: 345 RIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDE 404
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
K + + L+ YG ++ A+ + ++R E L+REM+ + + +Y ++ GY+M +
Sbjct: 405 AKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVAD 464
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
+ VF+ ++ G TP LIN Y G+ KA + M++ G++ + K ++
Sbjct: 465 EKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSM 524
Query: 351 ILSACEKENQLNRALEFLIDLERDG 375
+++ K A D+ ++G
Sbjct: 525 MINGFVKLKDWANAFAVFEDMVKEG 549
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 97/228 (42%), Gaps = 3/228 (1%)
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
R + IIHGY K ++ + M+R G + T ++ + + A E +E
Sbjct: 590 RTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLI---NGLVEKRQAVEILDE 646
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
+ L G ++ +Y ++ Y G + + + + V Y+ALL+ +G
Sbjct: 647 MTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGR 706
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
+ A V + + I ++ + +LI+ + G +A Q M+K G++P
Sbjct: 707 MQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTS 766
Query: 351 ILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
+SAC K +NRA + + ++E G + TL + R + E+
Sbjct: 767 FISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEK 814
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 100/230 (43%), Gaps = 4/230 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+ + +I+G +K Q A L M G ++ T T ++ Y+ G+ A E F
Sbjct: 623 TVHTFNGLINGLVEKRQ---AVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYF 679
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ G +D +Y +++ A ++G + + +EM A+ + S VY L+ G++
Sbjct: 680 TRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARR 739
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G+ A + + ++ G+ PD I+A AG +A + M G++P+ K
Sbjct: 740 GDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTY 799
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEA-SCTLAAWFKRLGVVE 397
++ + + +AL +++ G K C L + R + E
Sbjct: 800 TTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAE 849
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 77/181 (42%), Gaps = 1/181 (0%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
AN YTKI+ GY A ++ G D T ++ K+G ++ A
Sbjct: 654 ANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAV 713
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
+E+ P + Y ++ + R G + L+++M + V Y + + S
Sbjct: 714 TKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSK 773
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G+ A + E ++ G+ P+ + LI + A +KA + ++ M+ G++P DK
Sbjct: 774 AGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKP-DKA 832
Query: 348 V 348
V
Sbjct: 833 V 833
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 85/207 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y KII+ + + ++ AE + M+ G M+ Y+ + K F
Sbjct: 413 NASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVF 472
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ +K G +YG ++ Y + G + + + R M + V + Y ++ G+
Sbjct: 473 KRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKL 532
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
+ A VFE + G+ PD + +I+A+ G +A + M+K P+ +
Sbjct: 533 KDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTF 592
Query: 349 ALILSACEKENQLNRALEFLIDLERDG 375
I+ K + R+LE + R G
Sbjct: 593 MPIIHGYAKSGDMRRSLEVFDMMRRCG 619
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 88/218 (40%), Gaps = 3/218 (1%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E F + Y +I+ Y K +I A MK G + T ++M+ + K +
Sbjct: 475 LKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKD 534
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A FE++ G D Y +++ A+ G +DR ++EM + +
Sbjct: 535 WANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMP 594
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ GY+ +G+ + VF+ ++ G P LIN + ++A M AG
Sbjct: 595 IIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLV---EKRQAVEILDEMTLAG 651
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMV 378
+ ++ I+ +A E+ L+ +G V
Sbjct: 652 VSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDV 689
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 83/187 (44%), Gaps = 6/187 (3%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E + +I Y ++ K ++Q+A M R + +++ +++ G+
Sbjct: 682 LQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGD 741
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + +++K G D +Y S + A +AG ++R + EM+A V + Y
Sbjct: 742 VWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTT 801
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAY------TAFQ 334
L++G++ E A +E ++ GI PD + L+ + +AY T +
Sbjct: 802 LIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICK 861
Query: 335 NMRKAGL 341
M +AGL
Sbjct: 862 EMVEAGL 868
>gi|356575482|ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Glycine max]
Length = 576
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 107/232 (46%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y I+G K AE MK+ T T+++ +Y KAG MA + F E+
Sbjct: 228 YNAYINGLMKGGNSDKAEEIFKRMKKDACKPTTETYTMLINLYGKAGKSFMALKLFHEMM 287
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ +Y ++V A+ R G+ ++ E + +M + Y AL+ YS G
Sbjct: 288 SHDCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYAYNALMEAYSRAGYPY 347
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
GA +F +Q G PD +L++AY AG A F++M++ G+ P+ K ++L
Sbjct: 348 GAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLL 407
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
SA K +N+ E L + + G + ++ + RLG ++E VLR
Sbjct: 408 SAYSKMGSVNKCEEILNQMCKSGLKLDTYVLNSMLNLYGRLGQFGKMEEVLR 459
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 115/287 (40%), Gaps = 35/287 (12%)
Query: 154 LQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVV 213
+ + LL SF+ ++ Y +I +G+K+ + AE+T L + I + T +++
Sbjct: 139 ISICRWILLRSSFKPDVICYNLLIEAFGQKLLYKEAESTYLQLLEARCIPTEDTYALLIK 198
Query: 214 MYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYV 273
Y +G L+ AE F E++ G P Y + + ++ G D+ E + + M
Sbjct: 199 AYCISGLLEKAEAVFAEMRNYGLPSSAVVYNAYINGLMKGGNSDKAEEIFKRMKKDACKP 258
Query: 274 GSEVYKALLRGYSMNGNS-----------------------------------EGAQRVF 298
+E Y L+ Y G S E A+ VF
Sbjct: 259 TTETYTMLINLYGKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFAREGLCEKAEEVF 318
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
E +Q AG+ PD L+ AY AG A F M+ G EP +++ A K
Sbjct: 319 EQMQEAGLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKA 378
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ A D++R G ++ L + + ++G V + E +L +
Sbjct: 379 GFQDDAEAVFKDMKRVGITPTMKSHMVLLSAYSKMGSVNKCEEILNQ 425
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 83/208 (39%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E + Y ++ YGK +AE MKR G + V++ YSK G++ EE
Sbjct: 362 EPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLLSAYSKMGSVNKCEE 421
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
++ G LD SM+ Y R G + E +LR M+ Y L+ Y
Sbjct: 422 ILNQMCKSGLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEKGSYVADISTYNILINRYG 481
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G E + +F+ + G+ PD I AY K F+ M G P
Sbjct: 482 QAGFIERMEDLFQLLPSKGLKPDVVTWTSRIGAYSKKKLYLKCLEIFEEMIDDGCYPDGG 541
Query: 347 CVALILSACEKENQLNRALEFLIDLERD 374
++L+AC E+Q + + + +D
Sbjct: 542 TAKVLLAACSNEDQTEQVTTVIRTMHKD 569
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 102/243 (41%), Gaps = 2/243 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E E ++ Y ++ Y + A M+ G D+ + ++V Y KAG
Sbjct: 323 EAGLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQD 382
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
AE F+++K +G +S+ ++ AY + G +++ E +L +M + + + V ++L
Sbjct: 383 DAEAVFKDMKRVGITPTMKSHMVLLSAYSKMGSVNKCEEILNQMCKSGLKLDTYVLNSML 442
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
Y G + V ++ D +LIN Y AG ++ FQ + GL+
Sbjct: 443 NLYGRLGQFGKMEEVLRVMEKGSYVADISTYNILINRYGQAGFIERMEDLFQLLPSKGLK 502
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDG-FMVGKEASCTLAAWFKRLGVVEEVEH 401
P + A K+ + LE ++ DG + G A LAA E+V
Sbjct: 503 PDVVTWTSRIGAYSKKKLYLKCLEIFEEMIDDGCYPDGGTAKVLLAACSNE-DQTEQVTT 561
Query: 402 VLR 404
V+R
Sbjct: 562 VIR 564
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 78/179 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + NI YT +++ + ++ + AE M+ G D ++ YS+AG
Sbjct: 286 MMSHDCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYAYNALMEAYSRAGY 345
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A E F ++ +G D+ SY +V AY +AG D E + ++M + + +
Sbjct: 346 PYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMV 405
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
LL YS G+ + + + +G+ D + ++N Y GQ K + M K
Sbjct: 406 LLSAYSKMGSVNKCEEILNQMCKSGLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEKG 464
>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 111/239 (46%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L E +I Y ++ K Q+ A + M R+ + + VT + ++ Y+KAG
Sbjct: 317 MLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGR 376
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A F E+K LD+ SY +++ Y + G + + +EM++ + + Y A
Sbjct: 377 LDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNA 436
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL GY G E +RVFE ++ I P+ + LI+ Y G Q+A F+ +KAG
Sbjct: 437 LLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAG 496
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEV 399
L+ + ++ A K + A+ FL ++ ++G ++ F R G E V
Sbjct: 497 LKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGSAECV 555
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 97/239 (40%), Gaps = 1/239 (0%)
Query: 169 NIRDYTKIIHGYGKK-MQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
N+ Y +I GK + A M R G D++T ++ + + G + A
Sbjct: 254 NLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNL 313
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
F E+ G D +Y +++ A + G +D ++ EM + + Y ++ GY+
Sbjct: 314 FSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAK 373
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G + A +F ++FA I D L++ Y G+ ++A + M +G++
Sbjct: 374 AGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVT 433
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREY 406
+L K+ + +++ + TL + + G+ +E V RE+
Sbjct: 434 YNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREF 492
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 108/272 (39%), Gaps = 12/272 (4%)
Query: 139 LAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKR 198
+++L +L +E L V E AL E + + ++ +I YG+ A MK
Sbjct: 192 ISILGRLGQVE--LAKNVFETAL-NEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKS 248
Query: 199 RGFICDQVTLTVMVVMYSKAG-NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLD 257
G + VT ++ K G + A E F+E+ G D+ ++ S++ R G+ +
Sbjct: 249 SGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWE 308
Query: 258 RGEVLLREMDAQEVYVGSE----VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
L EM +Y G E Y LL G + A ++ + I P+
Sbjct: 309 AARNLFSEM----LYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTY 364
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
+ +I+ Y AG+ +A F M+ A + +LS K + AL ++E
Sbjct: 365 STVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMES 424
Query: 374 DGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
G L + + G EEV+ V E
Sbjct: 425 SGIKKDAVTYNALLGGYGKQGKYEEVKRVFEE 456
>gi|242060656|ref|XP_002451617.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
gi|241931448|gb|EES04593.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
Length = 593
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 108/231 (46%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y + G K + A MK+ + T T+M+ +Y KA + + F E+K
Sbjct: 238 YNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLMINVYGKAKQPMSSLKVFNEMK 297
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+G + +Y ++V A+ R G+ ++ E + EM Y AL+ YS G +
Sbjct: 298 TIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQ 357
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
GA +F ++ G PD +L++AY AG Q+A AFQ +++ G+ P+ K L+L
Sbjct: 358 GASEIFSLMEHMGCEPDRASYNILVDAYGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLL 417
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
SA K + R E + L + G A + + R G ++++E +L
Sbjct: 418 SAHAKSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLL 468
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 120/280 (42%), Gaps = 6/280 (2%)
Query: 137 DWLAVLKQLKLMEH--PLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLL 194
D + V QL+L P+ + V E L SF +I Y +I YG+K Q+ AE+ +
Sbjct: 131 DIVNVAVQLRLNRQWEPI-ITVCEWILYRSSFRPDIICYNLLIDAYGQKRQLNKAESIYM 189
Query: 195 AMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG 254
A+ + + T +++ Y +G L AE E++ G P Y + + ++A
Sbjct: 190 ALLEAHCVPTEDTYALLLRAYCNSGQLHRAEGVISEMQKNGLPPTATVYNAYLDGLLKAR 249
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
++ + + M + +E Y ++ Y + +VF ++ G P+
Sbjct: 250 CSEKAVEVYQRMKKERCRTNTETYTLMINVYGKAKQPMSSLKVFNEMKTIGCKPNICTYT 309
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
L+NA+ G +KA F+ M++AG EP ++ A + A E +E
Sbjct: 310 ALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHM 369
Query: 375 GFMVGKEASCTLAAWFKRLGVVEEVEHV---LREYGLRET 411
G + + L + R G+ +E E L++ G+R T
Sbjct: 370 GCEPDRASYNILVDAYGRAGLHQEAEAAFQELKQQGMRPT 409
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 76/157 (48%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
NI YT +++ + ++ + AE M++ G D ++ YS+AG + A E F
Sbjct: 304 NICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIF 363
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G D+ SY +V AY RAG+ E +E+ Q + + + LL ++ +
Sbjct: 364 SLMEHMGCEPDRASYNILVDAYGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHAKS 423
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQ 325
GN + V + +G+ PD ++NAY AG+
Sbjct: 424 GNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGR 460
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 86/210 (40%), Gaps = 7/210 (3%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ YG+ Q AE +K++G + +++ ++K+GN+ EE ++
Sbjct: 378 YNILVDAYGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHAKSGNVARCEEVMAQLH 437
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYV-------GSEVYKALLRGY 285
G D + +M+ AY RAG LD E LL M+ + Y L+ Y
Sbjct: 438 KSGLRPDTFALNAMLNAYGRAGRLDDMERLLGAMERGGDDDAGGGAAPDTSTYNVLVNVY 497
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
G + + F A+ G+ D I AY + + F+ M AG P
Sbjct: 498 GRAGYLDRMEAAFRALAARGLAADVVTWTSRIGAYARKKEYGRCLEIFEEMVDAGCYPDA 557
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDG 375
++L+AC E Q+ + + + +D
Sbjct: 558 GTAKVLLAACSDERQVEQVTAIVRSMHKDA 587
Score = 41.6 bits (96), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 73/185 (39%), Gaps = 7/185 (3%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L ++ ++ + ++ + K + E + + + G D L M+ Y +AG
Sbjct: 401 LKQQGMRPTMKSHMLLLSAHAKSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGR 460
Query: 221 LKMAEETFEEIKLLGEPL-------DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYV 273
L E ++ G+ D +Y +V Y RAG LDR E R + A+ +
Sbjct: 461 LDDMERLLGAMERGGDDDAGGGAAPDTSTYNVLVNVYGRAGYLDRMEAAFRALAARGLAA 520
Query: 274 GSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAF 333
+ + + Y+ +FE + AG PDA +L+ A Q ++
Sbjct: 521 DVVTWTSRIGAYARKKEYGRCLEIFEEMVDAGCYPDAGTAKVLLAACSDERQVEQVTAIV 580
Query: 334 QNMRK 338
++M K
Sbjct: 581 RSMHK 585
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 112/233 (48%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++R Y+ +IHG K Q + + AMK++GF D +V + K+G L A
Sbjct: 562 FLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAY 621
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
E EE+K+ P +YGS++ + LD +L E ++ + + VY +L+ G+
Sbjct: 622 EVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGF 681
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
G + A + E + G+TP+ L++A A + +A FQ+M++ P+
Sbjct: 682 GKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNT 741
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
+++++ + + N+A F ++++ G + T+ A ++G + +
Sbjct: 742 YTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITD 794
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 83/170 (48%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
+K GF+ D + ++++ +KAG + F +K G LD R+Y ++V + ++G
Sbjct: 557 IKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGK 616
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
LD+ +L EM + V Y +++ G + + A +FE + GI + + +
Sbjct: 617 LDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSS 676
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
LI+ + G+ +AY + M K GL P+ ++ A K ++N AL
Sbjct: 677 LIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEAL 726
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 84/190 (44%), Gaps = 1/190 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E +E + +T ++ ++ +++ A + +K D V V + + KAGN+
Sbjct: 210 EVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVD 269
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
MA + F E+K G D SY SM+ +AG L E L +M+ + + Y ++
Sbjct: 270 MAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMI 329
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
GY G E A ++ + ++ G P ++ + +A T F+ M+K E
Sbjct: 330 MGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDA-E 388
Query: 343 PSDKCVALIL 352
P+ +I+
Sbjct: 389 PNSSTYNIII 398
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 89/216 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L+ AN YT +I + + ++ M RRG D L + KAG+
Sbjct: 487 MLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGD 546
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ FE+IK G D RSY ++ +AG + M Q + + Y A
Sbjct: 547 VEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNA 606
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G+ +G + A V E ++ + P +I+ + +AY F+ + G
Sbjct: 607 VVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKG 666
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+E + + ++ K +++ A L ++ + G
Sbjct: 667 IELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGL 702
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 96/237 (40%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y +I G GKK + +A M G + V T ++ + G + + F
Sbjct: 460 NSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIF 519
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+ G D + + +AG +++G + ++ Y L+ G +
Sbjct: 520 KEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKA 579
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + +F A++ G DAR +++ + +G+ KAY + M+ + P+
Sbjct: 580 GQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATY 639
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
I+ K ++L+ A + + G + +L F ++G ++E +L E
Sbjct: 640 GSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEE 696
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 88/208 (42%), Gaps = 4/208 (1%)
Query: 161 LLEES----FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS 216
L EE+ E N+ Y+ +I G+GK +I A L M ++G + T ++
Sbjct: 658 LFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALV 717
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
KA + A F+ +K + + +Y ++ R ++ V +EM Q +
Sbjct: 718 KAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVV 777
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
Y ++ G + GN A +FE + G TPDA LI A ++ +AY F+
Sbjct: 778 TYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEET 837
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRA 364
R G + K +L A K L +A
Sbjct: 838 RLKGCRINVKACISLLDALNKAECLEQA 865
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 102/274 (37%), Gaps = 39/274 (14%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I GYG Q +NA L +K RG I V+ ++ K + A FE +K
Sbjct: 325 YNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMK 384
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMD------------------------- 267
EP + +Y ++ AG ++ ++ EM+
Sbjct: 385 KDAEP-NSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFE 443
Query: 268 -AQEVY---------VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
A E++ S Y +L+ G GN + A R+FE + G + + LI
Sbjct: 444 PAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLI 503
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
+ M G+ + + F+ M + G +P + + K + + D++ GF+
Sbjct: 504 RNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFL 563
Query: 378 VGKEASCTLAAWFKRLGVVEE---VEHVLREYGL 408
+ L + G E + H +++ G
Sbjct: 564 PDVRSYSILIHGLTKAGQARETSSIFHAMKQQGF 597
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 61/133 (45%)
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI 301
+Y ++ A A +R LLR+M VG ++ L+R + G EGA + + +
Sbjct: 184 AYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEV 243
Query: 302 QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQL 361
+ + + PD + + I+ + AG A+ F ++ GL+P D ++ K +L
Sbjct: 244 KGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRL 303
Query: 362 NRALEFLIDLERD 374
+ A E +E +
Sbjct: 304 SEAEELFGQMETE 316
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 89/226 (39%), Gaps = 35/226 (15%)
Query: 185 QIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYG 244
++ +AE + AM+R F TV++ ++A + A E +++ +G + +
Sbjct: 162 RLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFT 221
Query: 245 SMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFA 304
++V A R G ++ L+ E+ + +Y + + GN + A + F ++
Sbjct: 222 TLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQ 281
Query: 305 GITPD-------------------------------ARMCAL----LINAYQMAGQSQKA 329
G+ PD A CA +I Y AGQ + A
Sbjct: 282 GLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENA 341
Query: 330 YTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
Y +++ G PS IL+ K+ +++ AL +++D
Sbjct: 342 YKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDA 387
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 92/184 (50%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + + YT +I G+G+ ++ +N M RG D+VT T ++ +Y KAG
Sbjct: 389 MLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGE 448
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A E+ +G + +YG+++ + G LD LL EM + + + +Y +
Sbjct: 449 MVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNS 508
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G GN E A ++ + ++ AGI PDA +I+AY G KA+ Q M G
Sbjct: 509 MVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRG 568
Query: 341 LEPS 344
L+P+
Sbjct: 569 LQPT 572
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 87/192 (45%), Gaps = 1/192 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
NI Y +I G K ++ A L M+++G + MV KAGN++ A +
Sbjct: 467 NIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLM 526
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+++ G D +Y +++ AY R G +D+ LL+EM + + + L+ G+ M
Sbjct: 527 KEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCML 586
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP-SDKC 347
G E R+ + GI PDA L+ + + ++ MR G+ P S+
Sbjct: 587 GMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTY 646
Query: 348 VALILSACEKEN 359
LI C+ N
Sbjct: 647 NILIKGHCKARN 658
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 88/192 (45%)
Query: 154 LQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVV 213
+++A E N Y II+ + +++ A L+ M R D V+ + ++
Sbjct: 242 IEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVID 301
Query: 214 MYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYV 273
Y G LK A + +++++ G ++ +Y S+++ + G E +LREM +Q++
Sbjct: 302 GYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIP 361
Query: 274 GSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAF 333
+ VY L+ G+ G+ A + F+ + I+PD LI + G+ + F
Sbjct: 362 DNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLF 421
Query: 334 QNMRKAGLEPSD 345
M GL+P +
Sbjct: 422 HEMISRGLKPDE 433
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 73/195 (37%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I Y + I A L M RG VT V++ + G L+ + +
Sbjct: 541 YTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWML 600
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +++ + ++ + + M Q V S Y L++G+ N +
Sbjct: 601 EKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLK 660
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +++ + G P LI + + +A F+ MR GL + +
Sbjct: 661 EAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFV 720
Query: 353 SACEKENQLNRALEF 367
C +E + L
Sbjct: 721 DMCYEEGDVEITLNL 735
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 92/184 (50%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + + YT +I G+G+ ++ +N M RG D+VT T ++ +Y KAG
Sbjct: 389 MLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGE 448
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A E+ +G + +YG+++ + G LD LL EM + + + +Y +
Sbjct: 449 MVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNS 508
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G GN E A ++ + ++ AGI PDA +I+AY G KA+ Q M G
Sbjct: 509 MVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRG 568
Query: 341 LEPS 344
L+P+
Sbjct: 569 LQPT 572
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 87/192 (45%), Gaps = 1/192 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
NI Y +I G K ++ A L M+++G + MV KAGN++ A +
Sbjct: 467 NIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLM 526
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+++ G D +Y +++ AY R G +D+ LL+EM + + + L+ G+ M
Sbjct: 527 KEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCML 586
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP-SDKC 347
G E R+ + GI PDA L+ + + ++ MR G+ P S+
Sbjct: 587 GMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTY 646
Query: 348 VALILSACEKEN 359
LI C+ N
Sbjct: 647 NILIKGHCKARN 658
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 94/212 (44%)
Query: 154 LQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVV 213
+++A E N Y II+ + +++ A L+ M R D V+ + ++
Sbjct: 242 IEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVID 301
Query: 214 MYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYV 273
Y G LK A + +++++ G ++ +Y S+++ + G E +LREM +Q++
Sbjct: 302 GYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIP 361
Query: 274 GSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAF 333
+ VY L+ G+ G+ A + F+ + I+PD LI + G+ + F
Sbjct: 362 DNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLF 421
Query: 334 QNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
M GL+P + ++ K ++ A
Sbjct: 422 HEMISRGLKPDEVTYTTLIDVYCKAGEMVNAF 453
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 73/195 (37%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I Y + I A L M RG VT V++ + G L+ + +
Sbjct: 541 YTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWML 600
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +++ + ++ + + M Q V S Y L++G+ N +
Sbjct: 601 EKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLK 660
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +++ + G P LI + + +A F+ MR GL + +
Sbjct: 661 EAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFV 720
Query: 353 SACEKENQLNRALEF 367
C +E + L
Sbjct: 721 DMCYEEGDVEITLNL 735
>gi|168019209|ref|XP_001762137.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686541|gb|EDQ72929.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 513
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 122/270 (45%), Gaps = 19/270 (7%)
Query: 106 FVKQIICVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEES 165
+K+ C+ ET + + L+AA+ R + RA+ VL ++K E +
Sbjct: 126 LMKKFQCLPTET-SFNVLMAAYSRGGQLERAE--RVLHEMK----------------ESN 166
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
+ Y + K Q AE+ M+ RG T T+M+ +Y KA + AE
Sbjct: 167 CSPGLVTYNTYLEVLNKSGSWQLAEDVFREMQNRGVPPAVNTFTLMINIYGKAHHSAKAE 226
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F+ ++ P +Y +++ A+ R G R E + E+ + Y ALL Y
Sbjct: 227 HLFQSMRKALCPPSLFTYTALINAHAREGNCVRAEEIFAELQSVGFVPDIYTYNALLEAY 286
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
S G+ GA+ VFE + AG+ D +LI+A+ AG A + +M+K G +P+
Sbjct: 287 SRGGHPAGAKEVFETMLEAGVKADHVSYNILIDAFGRAGLISDAQAIYDSMKKVGFKPTM 346
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDG 375
K L+LSA K ++ A F+ LE G
Sbjct: 347 KSHILLLSAFVKAGRVTDAENFVRRLESMG 376
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 103/234 (44%), Gaps = 1/234 (0%)
Query: 140 AVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR 199
A+L+ HP + +LE +A+ Y +I +G+ I +A+ +MK+
Sbjct: 281 ALLEAYSRGGHPAGAKEVFETMLEAGVKADHVSYNILIDAFGRAGLISDAQAIYDSMKKV 340
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
GF + +++ + KAG + AE ++ +G D + S++ AY +G +D+
Sbjct: 341 GFKPTMKSHILLLSAFVKAGRVTDAENFVRRLESMGVEPDTFMFNSLLGAYGNSGRMDKM 400
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
E L M L+ Y+ G E A+ +F +++ G TPD L+ A
Sbjct: 401 ESLYESMQGSVCKPDIITLNTLINVYAQGGYIERAEEIFNSLESKGFTPDVMSWTSLMGA 460
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
Y +K + +Q M AG P ++LS+C Q+ + +I+ +R
Sbjct: 461 YSKRKLYRKCVSVYQKMLIAGCIPDRATAKVLLSSCRGPEQVKEVTD-MIETQR 513
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 102/232 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+ ++ Y + Q++ AE L MK VT + + +K+G+ ++AE+ F E++
Sbjct: 139 FNVLMAAYSRGGQLERAERVLHEMKESNCSPGLVTYNTYLEVLNKSGSWQLAEDVFREMQ 198
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G P ++ M+ Y +A + E L + M Y AL+ ++ GN
Sbjct: 199 NRGVPPAVNTFTLMINIYGKAHHSAKAEHLFQSMRKALCPPSLFTYTALINAHAREGNCV 258
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ +F +Q G PD L+ AY G A F+ M +AG++ +++
Sbjct: 259 RAEEIFAELQSVGFVPDIYTYNALLEAYSRGGHPAGAKEVFETMLEAGVKADHVSYNILI 318
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
A + ++ A +++ GF ++ L + F + G V + E+ +R
Sbjct: 319 DAFGRAGLISDAQAIYDSMKKVGFKPTMKSHILLLSAFVKAGRVTDAENFVR 370
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 80/177 (45%)
Query: 201 FICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGE 260
F D +++ Y + AE TF +K + S+ ++ AY R G L+R E
Sbjct: 97 FKPDVGCFNMLMDAYGRTKQWTEAENTFHLMKKFQCLPTETSFNVLMAAYSRGGQLERAE 156
Query: 261 VLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAY 320
+L EM G Y L + +G+ + A+ VF +Q G+ P L+IN Y
Sbjct: 157 RVLHEMKESNCSPGLVTYNTYLEVLNKSGSWQLAEDVFREMQNRGVPPAVNTFTLMINIY 216
Query: 321 QMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
A S KA FQ+MRKA PS +++A +E RA E +L+ GF+
Sbjct: 217 GKAHHSAKAEHLFQSMRKALCPPSLFTYTALINAHAREGNCVRAEEIFAELQSVGFV 273
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 91/204 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I+ + ++ AE ++ GF+ D T ++ YS+ G+ A+E FE +
Sbjct: 244 YTALINAHAREGNCVRAEEIFAELQSVGFVPDIYTYNALLEAYSRGGHPAGAKEVFETML 303
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D SY ++ A+ RAG++ + + M + + LL + G
Sbjct: 304 EAGVKADHVSYNILIDAFGRAGLISDAQAIYDSMKKVGFKPTMKSHILLLSAFVKAGRVT 363
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ ++ G+ PD M L+ AY +G+ K + +++M+ + +P + ++
Sbjct: 364 DAENFVRRLESMGVEPDTFMFNSLLGAYGNSGRMDKMESLYESMQGSVCKPDIITLNTLI 423
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
+ + + RA E LE GF
Sbjct: 424 NVYAQGGYIERAEEIFNSLESKGF 447
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 83/178 (46%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F +I Y ++ Y + A+ M G D V+ +++ + +AG + A+
Sbjct: 272 FVPDIYTYNALLEAYSRGGHPAGAKEVFETMLEAGVKADHVSYNILIDAFGRAGLISDAQ 331
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
++ +K +G +S+ ++ A+V+AG + E +R +++ V + ++ +LL Y
Sbjct: 332 AIYDSMKKVGFKPTMKSHILLLSAFVKAGRVTDAENFVRRLESMGVEPDTFMFNSLLGAY 391
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
+G + + ++E++Q + PD LIN Y G ++A F ++ G P
Sbjct: 392 GNSGRMDKMESLYESMQGSVCKPDIITLNTLINVYAQGGYIERAEEIFNSLESKGFTP 449
>gi|218190151|gb|EEC72578.1| hypothetical protein OsI_06020 [Oryza sativa Indica Group]
Length = 738
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 107/241 (44%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E N Y + G K + A MKR + T T+M+ +Y KA
Sbjct: 381 EHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPM 440
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
+ + F E+K +G + +Y ++V A+ R G+ ++ E + EM Y AL+
Sbjct: 441 SSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALM 500
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
YS G +GA +F +Q G PD +L++AY AG + A F+ +++ G+
Sbjct: 501 EAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMS 560
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ K L+L+A + R E + L + G A + + R G ++++E +
Sbjct: 561 PTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERL 620
Query: 403 L 403
L
Sbjct: 621 L 621
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 122/292 (41%), Gaps = 15/292 (5%)
Query: 115 PETGNL-SDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDY 173
P T NL DL+ V+F ++ D L + V E L SF +I Y
Sbjct: 276 PSTHNLFDDLVNVAVQFRMNKKWD--------------LIIPVCEWILYRSSFRPDIICY 321
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKL 233
+I YGKK Q+ AE+ +A+ + + T +++ Y AG+L AE E++
Sbjct: 322 NLLIESYGKKRQLNKAESIYMALLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISEMRE 381
Query: 234 LGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEG 293
G P + Y + + ++A ++ + + M + +E + ++ Y
Sbjct: 382 HGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPMS 441
Query: 294 AQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILS 353
+ +VF ++ G P+ L+NA+ G +KA F+ M++AG EP ++
Sbjct: 442 SMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALME 501
Query: 354 ACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
A + A E ++ G + + L + R G+ E+ E V E
Sbjct: 502 AYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEE 553
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 97/212 (45%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
E AN +T +I+ YGK Q ++ MK G + T T +V +++ G +
Sbjct: 417 ERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEK 476
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
AEE FEE++ G D +Y +++ AY RAG+ + M Y L+
Sbjct: 477 AEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVD 536
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
Y G E A+ VFE ++ G++P + LL+ A+ +G + + + K+GL P
Sbjct: 537 AYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTP 596
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDG 375
+ +L+A + +L+ L +ER G
Sbjct: 597 DTFALNAMLNAYARAGRLDDMERLLAAMERRG 628
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 72/158 (45%), Gaps = 1/158 (0%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E ++ Y ++ Y + Q A M+ G D+ + ++V Y +AG + AE
Sbjct: 490 EPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEA 549
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
FEE+K G +S+ ++ A+ R+G R E ++ ++ + + A+L Y+
Sbjct: 550 VFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYA 609
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAG 324
G + +R+ A++ G D + +NAY AG
Sbjct: 610 RAGRLDDMERLLAAMERRG-DADVGTYNVAVNAYGRAG 646
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 84/196 (42%), Gaps = 3/196 (1%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E + Y ++ YG+ ++AE +K+RG + +++ ++++GN EE
Sbjct: 525 EPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEE 584
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQ-EVYVGSEVYKALLRGY 285
++ G D + +M+ AY RAG LD E LL M+ + + VG+ Y + Y
Sbjct: 585 VMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLLAAMERRGDADVGT--YNVAVNAY 642
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
G + F A+ G+ D + AY + + + M AG P
Sbjct: 643 GRAGYVGRMEAAFAAVAARGLAADVVTWTARMGAYARRKEYGRCVGMVEEMVDAGCYPDA 702
Query: 346 KCVALILSACEKENQL 361
++L+AC E Q+
Sbjct: 703 GTARVLLAACSDERQV 718
>gi|388499386|gb|AFK37759.1| unknown [Lotus japonicus]
Length = 500
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 111/233 (47%), Gaps = 4/233 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y I+G K AE L MKR G T T+++ +Y K G MA + F E+
Sbjct: 235 YNSYINGLMKGGNPNKAEEIFLRMKRDGCKPSTETYTMLINLYGKDGKSFMALKVFNEML 294
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY--KALLRGYSMNGN 290
+ +Y ++V A+ R G+ ++ E + +M QE + +VY AL+ YS G
Sbjct: 295 SHKCKPNICTYTALVNAFAREGLCEKAEEVFEQM--QEAGLEPDVYSYNALMEAYSRAGF 352
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
GA +F +Q G PD +L++AY AG A F++M++ G+ P+ K +
Sbjct: 353 PYGAAEIFSLMQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMV 412
Query: 351 ILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+LSA K +++ + L + + G + ++ + RLG ++E VL
Sbjct: 413 LLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVL 465
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 123/305 (40%), Gaps = 36/305 (11%)
Query: 137 DWLAVLKQLKLMEH-PLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLA 195
D L V QL++ + + + LL SF+ ++ Y +I +G+K + AE+T L
Sbjct: 128 DILTVSVQLRMRKQWDSIISICRWILLRSSFKQDVICYNLLIDAFGQKFLYKEAESTYLQ 187
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
+ I ++ T +++ Y +G L+ AE F E+K G P Y S + ++ G
Sbjct: 188 LLEARCIPNEDTYALLIKAYCLSGLLEKAEAVFVEMKNYGLPSSAVVYNSYINGLMKGGN 247
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS------------------------ 291
++ E + M +E Y L+ Y +G S
Sbjct: 248 PNKAEEIFLRMKRDGCKPSTETYTMLINLYGKDGKSFMALKVFNEMLSHKCKPNICTYTA 307
Query: 292 -----------EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
E A+ VFE +Q AG+ PD L+ AY AG A F M+ G
Sbjct: 308 LVNAFAREGLCEKAEEVFEQMQEAGLEPDVYSYNALMEAYSRAGFPYGAAEIFSLMQHMG 367
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
EP +++ A + LN A D++R G ++ L + F + G V + E
Sbjct: 368 CEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 427
Query: 401 HVLRE 405
+L +
Sbjct: 428 DILNQ 432
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 89/204 (43%), Gaps = 6/204 (2%)
Query: 173 YTKIIHGYGK---KMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFE 229
YT +I+ YGK N +L+ K + IC T T +V +++ G + AEE FE
Sbjct: 270 YTMLINLYGKDGKSFMALKVFNEMLSHKCKPNIC---TYTALVNAFAREGLCEKAEEVFE 326
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
+++ G D SY +++ AY RAG + M Y L+ Y G
Sbjct: 327 QMQEAGLEPDVYSYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNILVDAYGRAG 386
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
A+ VFE ++ GITP + +L++A+ G K M K+GL+ +
Sbjct: 387 FLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLN 446
Query: 350 LILSACEKENQLNRALEFLIDLER 373
+L+ + Q + E L +E
Sbjct: 447 SMLNLYGRLGQFGKMEEVLTVMEN 470
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 78/182 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + NI YT +++ + ++ + AE M+ G D + ++ YS+AG
Sbjct: 293 MLSHKCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYSYNALMEAYSRAGF 352
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A E F ++ +G D+ SY +V AY RAG L+ E + +M + + +
Sbjct: 353 PYGAAEIFSLMQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMV 412
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL +S GN + + + +G+ D + ++N Y GQ K M
Sbjct: 413 LLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGS 472
Query: 341 LE 342
E
Sbjct: 473 CE 474
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 70/162 (43%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E E ++ Y ++ Y + A M+ G D+ + ++V Y +AG L
Sbjct: 330 EAGLEPDVYSYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNILVDAYGRAGFLN 389
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
AE FE++K +G +S+ ++ A+ + G + + E +L +M + + + V ++L
Sbjct: 390 DAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSML 449
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAG 324
Y G + V ++ D +LIN Y AG
Sbjct: 450 NLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAG 491
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 52/126 (41%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ YG+ + +AE MKR G + V++ +SK GN+ E+ ++
Sbjct: 375 YNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMC 434
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G LD SM+ Y R G + E +L M+ Y L+ Y G +
Sbjct: 435 KSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFID 494
Query: 293 GAQRVF 298
+ +F
Sbjct: 495 KMEGLF 500
>gi|242074832|ref|XP_002447352.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
gi|241938535|gb|EES11680.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
Length = 888
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 144/318 (45%), Gaps = 8/318 (2%)
Query: 77 WIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRFMKPRRA 136
W++ G ++A S + + C+ F ++++ PE + +++A+ R KP R
Sbjct: 203 WVEAGV-----AREARSPWHKGREDACREF-RRVLESRPE--DWQAVVSAFERIPKPSRR 254
Query: 137 DWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAM 196
++ ++ + + + E N +T ++H Y ++ A + + M
Sbjct: 255 EFGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEM 314
Query: 197 KRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGML 256
K G VT ++++ Y K + + A++ F+E K + L+ Y +++ A+ ++G +
Sbjct: 315 KSEGLEMTVVTYSILIAGYGKTNDAESADKLFKEAKTKLDNLNGIIYSNIIHAHCQSGNM 374
Query: 257 DRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALL 316
DR E L+REM+ + +VY +++ GY++ + + VFE ++ G P L
Sbjct: 375 DRAEELVREMEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFERLKECGFRPSIISYGCL 434
Query: 317 INAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
IN Y G+ KA + M G++ ++K +++++ + A D+ + G
Sbjct: 435 INLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGL 494
Query: 377 MVGKEASCTLAAWFKRLG 394
+ L F ++G
Sbjct: 495 QPDRAIYNLLVEAFCKMG 512
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 110/226 (48%), Gaps = 1/226 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +IHG +K Q++ A + L M G ++ T T+++ Y+ +G++ A E F +IK
Sbjct: 571 YNALIHGLIRKHQVERAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIK 630
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G LD Y +++ A ++G + + REM Q++ + +Y L+ G++ G+
Sbjct: 631 ESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVW 690
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + ++ GI P+ INA AG Q+A Q M GL+P+ K ++
Sbjct: 691 EAADLMKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLI 750
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEA-SCTLAAWFKRLGVVE 397
K + +RAL+ +++ G + A C + + R V+E
Sbjct: 751 KGWAKVSLPDRALKCFEEMKSAGLKPDEAAYHCLVTSLLSRATVME 796
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ IIH + + + AE + M+ G M+ Y+ A + K FE +K
Sbjct: 361 YSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFERLK 420
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G SYG ++ YV+ G + + + +EM++ + ++ Y L+ G+ +
Sbjct: 421 ECGFRPSIISYGCLINLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFA 480
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +FE + +G+ PD + LL+ A+ G +A F+ M+K ++PS++ I+
Sbjct: 481 NAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPII 540
Query: 353 SACEKENQLNRALEFLIDLERDG 375
+ RAL+ L + R G
Sbjct: 541 EGFAVAGDMKRALDTLDLMRRSG 563
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/256 (19%), Positives = 107/256 (41%), Gaps = 4/256 (1%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E F +I Y +I+ Y K ++ A M+ G + T ++++ + +
Sbjct: 419 LKECGFRPSIISYGCLINLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHD 478
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A FE++ G D+ Y +V A+ + G +DR + M + + + ++
Sbjct: 479 FANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRP 538
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G+++ G+ + A + ++ +G P LI+ Q ++A + M AG
Sbjct: 539 IIEGFAVAGDMKRALDTLDLMRRSGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIAG 598
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+ P++ +I+ + +A E+ ++ G + TL + G ++
Sbjct: 599 IAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSAL 658
Query: 401 HVLREYGLRETYSKIP 416
V RE ++ KIP
Sbjct: 659 AVTREM----SFQKIP 670
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/233 (17%), Positives = 96/233 (41%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ + K + A MK+ T ++ ++ AG++K A +T + ++
Sbjct: 501 YNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAGDMKRALDTLDLMR 560
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G +Y +++ +R ++R +L +M + Y ++RGY+ +G+
Sbjct: 561 RSGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIG 620
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A F I+ +G+ D + L+ A +G+ Q A + M + + +++
Sbjct: 621 KAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILI 680
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ + A + + ++ DG + + G ++ E+V++E
Sbjct: 681 DGWARRGDVWEAADLMKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQE 733
>gi|225464410|ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic [Vitis vinifera]
Length = 929
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 125/269 (46%), Gaps = 2/269 (0%)
Query: 108 KQIICVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFE 167
++++ PE N ++ A+ R KP R ++ ++ + + ++ E
Sbjct: 264 RKVLETEPE--NWQAVVQAFERIKKPSRKEFGLMVTYYARRGDMHHARGTFESMRARGIE 321
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
YT +IH Y ++ A + + MK G VT +++V ++K + + A+
Sbjct: 322 PTSHVYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHW 381
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
F+E K L+ YG+++ A+ +A + + E L+REM+ + + ++Y ++ GY++
Sbjct: 382 FKEAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTI 441
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
GN E VF+ ++ G TP LIN Y G+ KA + M AG++ + K
Sbjct: 442 IGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKT 501
Query: 348 VALILSACEKENQLNRALEFLIDLERDGF 376
+++++ + A D+ +DG
Sbjct: 502 YSMLINGFVRLKDWANAFAVFEDVVKDGL 530
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 106/230 (46%), Gaps = 1/230 (0%)
Query: 170 IRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFE 229
+ + +I G +K Q++ A L M G ++ T T ++ Y+ G+ A E F
Sbjct: 604 VHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFT 663
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
++K G LD +Y +++ A ++G + + REM +Q++ + VY L+ G++ G
Sbjct: 664 KLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRG 723
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
+ A + + ++ G+ PD INA AG Q+A Q M G++P+ K
Sbjct: 724 DVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYT 783
Query: 350 LILSACEKENQLNRALEFLIDLERDGFMVGKEA-SCTLAAWFKRLGVVEE 398
++ + + +AL+ +++ G K C + + R V EE
Sbjct: 784 TLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLMTSLLSRASVAEE 833
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/216 (19%), Positives = 91/216 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E F ++ Y +I+ Y K ++ A M+ G + T ++++ + + +
Sbjct: 455 LKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKD 514
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A FE++ G D Y +++ A+ G +DR ++EM + + +
Sbjct: 515 WANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMP 574
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G++ +G+ A +F+ ++++G P LI Q +KA M AG
Sbjct: 575 IIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAG 634
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+ P++ I+ +A E+ L+ +G
Sbjct: 635 ISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGL 670
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 84/201 (41%), Gaps = 1/201 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y II+ + + + AE + M+ G M+ Y+ GN + F+ +K
Sbjct: 397 YGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLK 456
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G SYG ++ Y++ G + + + + M+ + + Y L+ G+ +
Sbjct: 457 ECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWA 516
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A VFE + G+ PD + +I A+ G +A + M+K P+ + I+
Sbjct: 517 NAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPII 576
Query: 353 SACEKENQLNRALEFLIDLER 373
+ + RALE + D+ R
Sbjct: 577 HGFARSGDMRRALE-IFDMMR 596
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 73/159 (45%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E E ++ Y ++ K ++Q+A M + + +++ +++ G+
Sbjct: 665 LKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGD 724
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A E +++K G D +Y S + A +AG + R ++EM+ V + Y
Sbjct: 725 VWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTT 784
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
L+ G++ E A + F+ ++ AG+ PD + L+ +
Sbjct: 785 LIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLMTS 823
Score = 38.1 bits (87), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 26/122 (21%), Positives = 48/122 (39%), Gaps = 4/122 (3%)
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
N + + FE I+ P + L++ Y G A F++MR G+EP+
Sbjct: 273 NWQAVVQAFERIK----KPSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYT 328
Query: 350 LILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLR 409
++ A + AL + ++ +G + L F ++ E +H +E R
Sbjct: 329 SLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKER 388
Query: 410 ET 411
T
Sbjct: 389 HT 390
>gi|296084463|emb|CBI25022.3| unnamed protein product [Vitis vinifera]
Length = 927
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 125/269 (46%), Gaps = 2/269 (0%)
Query: 108 KQIICVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFE 167
++++ PE N ++ A+ R KP R ++ ++ + + ++ E
Sbjct: 243 RKVLETEPE--NWQAVVQAFERIKKPSRKEFGLMVTYYARRGDMHHARGTFESMRARGIE 300
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
YT +IH Y ++ A + + MK G VT +++V ++K + + A+
Sbjct: 301 PTSHVYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHW 360
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
F+E K L+ YG+++ A+ +A + + E L+REM+ + + ++Y ++ GY++
Sbjct: 361 FKEAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTI 420
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
GN E VF+ ++ G TP LIN Y G+ KA + M AG++ + K
Sbjct: 421 IGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKT 480
Query: 348 VALILSACEKENQLNRALEFLIDLERDGF 376
+++++ + A D+ +DG
Sbjct: 481 YSMLINGFVRLKDWANAFAVFEDVVKDGL 509
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 106/230 (46%), Gaps = 1/230 (0%)
Query: 170 IRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFE 229
+ + +I G +K Q++ A L M G ++ T T ++ Y+ G+ A E F
Sbjct: 583 VHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFT 642
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
++K G LD +Y +++ A ++G + + REM +Q++ + VY L+ G++ G
Sbjct: 643 KLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRG 702
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
+ A + + ++ G+ PD INA AG Q+A Q M G++P+ K
Sbjct: 703 DVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYT 762
Query: 350 LILSACEKENQLNRALEFLIDLERDGFMVGKEA-SCTLAAWFKRLGVVEE 398
++ + + +AL+ +++ G K C + + R V EE
Sbjct: 763 TLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLMTSLLSRASVAEE 812
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/216 (19%), Positives = 91/216 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E F ++ Y +I+ Y K ++ A M+ G + T ++++ + + +
Sbjct: 434 LKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKD 493
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A FE++ G D Y +++ A+ G +DR ++EM + + +
Sbjct: 494 WANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMP 553
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G++ +G+ A +F+ ++++G P LI Q +KA M AG
Sbjct: 554 IIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAG 613
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+ P++ I+ +A E+ L+ +G
Sbjct: 614 ISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGL 649
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 84/201 (41%), Gaps = 1/201 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y II+ + + + AE + M+ G M+ Y+ GN + F+ +K
Sbjct: 376 YGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLK 435
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G SYG ++ Y++ G + + + + M+ + + Y L+ G+ +
Sbjct: 436 ECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWA 495
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A VFE + G+ PD + +I A+ G +A + M+K P+ + I+
Sbjct: 496 NAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPII 555
Query: 353 SACEKENQLNRALEFLIDLER 373
+ + RALE + D+ R
Sbjct: 556 HGFARSGDMRRALE-IFDMMR 575
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 73/159 (45%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E E ++ Y ++ K ++Q+A M + + +++ +++ G+
Sbjct: 644 LKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGD 703
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A E +++K G D +Y S + A +AG + R ++EM+ V + Y
Sbjct: 704 VWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTT 763
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
L+ G++ E A + F+ ++ AG+ PD + L+ +
Sbjct: 764 LIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLMTS 802
Score = 38.1 bits (87), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 26/122 (21%), Positives = 48/122 (39%), Gaps = 4/122 (3%)
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
N + + FE I+ P + L++ Y G A F++MR G+EP+
Sbjct: 252 NWQAVVQAFERIK----KPSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYT 307
Query: 350 LILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLR 409
++ A + AL + ++ +G + L F ++ E +H +E R
Sbjct: 308 SLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKER 367
Query: 410 ET 411
T
Sbjct: 368 HT 369
>gi|302826107|ref|XP_002994593.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
gi|300137364|gb|EFJ04344.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
Length = 521
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 144/370 (38%), Gaps = 80/370 (21%)
Query: 77 WIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRFMKPRRA 136
W++ G N TE + +S + + + + + NL W FM
Sbjct: 19 WLETGRNFTEIELIVLSPAASSLAQFLR-MQEDATAIWNALDNLPRGHDTWDNFMS---- 73
Query: 137 DWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAM 196
V+ + P Q+ E L +F ++ Y +I YGK + I++AE T M
Sbjct: 74 ---VVVHFWNYKDWPRVTQMCEWVLQGTTFRPDLGCYNLLIDAYGKSLNIEDAEKTFNRM 130
Query: 197 KRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG--------------------- 235
+ + ++ T V++ Y AG+ + AEE F +++ G
Sbjct: 131 QEALCVPNEETFGVLINGYRLAGSFEKAEELFVQMQKRGYSPGPLACNTFLHVLEDAKEY 190
Query: 236 ---------------EPLDKRSYGSMVMAYVRAGMLDRGEVLLREM-------------- 266
EP + +Y M++ Y +AG + E+L R M
Sbjct: 191 RRAEALFRDLEKYECEP-NIDTYNRMIVIYGKAGEPSKAEMLYRSMRRAMCPPNICTFTA 249
Query: 267 -----DAQEVYVGSE----------------VYKALLRGYSMNGNSEGAQRVFEAIQFAG 305
Q +Y +E Y AL+ YS G+ GA +F+ +Q G
Sbjct: 250 LMNAFARQGLYREAERYFDKLQEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTMQRNG 309
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
PD +LINAY AG + A F++M+ AG P+ K L+LSA + ++ A
Sbjct: 310 CFPDTVSHNILINAYGRAGLYEDAEKIFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAE 369
Query: 366 EFLIDLERDG 375
E + +ERDG
Sbjct: 370 ELVSAMERDG 379
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 87/177 (49%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E NI Y ++I YGK + AE +M+R + T T ++ +++ G + AE
Sbjct: 206 EPNIDTYNRMIVIYGKAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAER 265
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
F++++ D +Y +++ AY + G + + M + + + L+ Y
Sbjct: 266 YFDKLQEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDTVSHNILINAYG 325
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G E A+++F+++Q AG +P+ + LL++AY AG+ ++A M + G +P
Sbjct: 326 RAGLYEDAEKIFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKP 382
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 75/159 (47%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
NI +T +++ + ++ + AE ++ + D ++ YS+ G+ A E F
Sbjct: 243 NICTFTALMNAFARQGLYREAERYFDKLQEFDYKPDHYAYNALMEAYSQGGSPAGALEIF 302
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ ++ G D S+ ++ AY RAG+ + E + + M + + LL Y+
Sbjct: 303 QTMQRNGCFPDTVSHNILINAYGRAGLYEDAEKIFKSMQSAGFSPNLKSNMLLLSAYARA 362
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQ 327
G E A+ + A++ G PD + LINAY ++G+ +
Sbjct: 363 GRVEEAEELVSAMERDGTKPDTLIYNSLINAYGVSGRHE 401
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 3/186 (1%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E ++ + Y ++ Y + A M+R G D V+ +++ Y +AG
Sbjct: 270 LQEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDTVSHNILINAYGRAGL 329
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ AE+ F+ ++ G + +S ++ AY RAG ++ E L+ M+ + +Y +
Sbjct: 330 YEDAEKIFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKPDTLIYNS 389
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAG---ITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
L+ Y ++G E + + + + PD LI Y AG +A FQ +
Sbjct: 390 LINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPRAEELFQGLA 449
Query: 338 KAGLEP 343
+ L P
Sbjct: 450 RLKLVP 455
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 32/162 (19%), Positives = 70/162 (43%), Gaps = 13/162 (8%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN----- 220
F N++ ++ Y + +++ AE + AM+R G D + ++ Y +G
Sbjct: 345 FSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKPDTLIYNSLINAYGVSGRHEDME 404
Query: 221 ---LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
KM + + ++ K D +Y +++ Y +AG + R E L + + ++ +
Sbjct: 405 ALLAKMVKSSSKQTKP-----DIGTYNTLIQVYAQAGFIPRAEELFQGLARLKLVPDATT 459
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+ AL+ GY+ + + + +G DA +L +A
Sbjct: 460 WTALMGGYAKKKLYRKCTSILKKMLESGCRADAVTARVLFSA 501
>gi|225452658|ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic [Vitis vinifera]
gi|296087770|emb|CBI35026.3| unnamed protein product [Vitis vinifera]
Length = 675
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 112/240 (46%), Gaps = 4/240 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ E N+ Y +I YGK ++ + A N + M+ RG + +T + ++ ++ KAG L
Sbjct: 394 KDIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWDKAGKLDR 453
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ Y +M++AY RAG++ + LL E+ + + E +L
Sbjct: 454 AAMLFQKLRSSGIEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRETAITILA 512
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + + F MR AG P
Sbjct: 513 G---AGRIEEATWVFRQAFDAGEVKDITVFGCMIDLFSRNRKHTNVIEVFDKMRGAGYFP 569
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+AL+L+AC K + +A ++E +G + E + + + G + V+ +
Sbjct: 570 DSNVIALVLNACGKLREFEKADAIYKEMEEEGCVFSDEVHFQMLSLYGARGDFQMVDSLF 629
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 98/233 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+ +GK + A L M+ G + D V+ + ++ MY + G A F E+
Sbjct: 263 YNSMINVFGKAKLFREARLLLPEMRAGGVMPDTVSYSTLLSMYVENGKYVEALSVFSEMN 322
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ PLD + M+ Y + M + L M + G Y LLR Y
Sbjct: 323 EVRCPLDLTTCNVMIDVYGQLDMAKEADRLFWSMRKMGIEPGIVSYNTLLRVYGEAELFG 382
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +F +Q I + +I Y + + +KA Q M+ G+EP+ + I+
Sbjct: 383 EAIHLFRLMQRKDIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTII 442
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
S +K +L+RA L G + + T+ ++R G+V + +L E
Sbjct: 443 SIWDKAGKLDRAAMLFQKLRSSGIEIDQVLYQTMIVAYERAGLVAHAKRLLHE 495
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 5/196 (2%)
Query: 148 MEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVT 207
+ H L+ ++ + AL + + Y+ +I +GK+ +A + L M++ D V
Sbjct: 173 LAHGLFEEMRQRALAPDRYT-----YSTLITHFGKEGMFDSALSWLQKMEQDRVSGDLVL 227
Query: 208 LTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMD 267
+ ++ + K + A F +K G D +Y SM+ + +A + +LL EM
Sbjct: 228 YSNLIELSRKLCDYSKAISIFSRLKRSGISPDLVAYNSMINVFGKAKLFREARLLLPEMR 287
Query: 268 AQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQ 327
A V + Y LL Y NG A VF + D C ++I+ Y ++
Sbjct: 288 AGGVMPDTVSYSTLLSMYVENGKYVEALSVFSEMNEVRCPLDLTTCNVMIDVYGQLDMAK 347
Query: 328 KAYTAFQNMRKAGLEP 343
+A F +MRK G+EP
Sbjct: 348 EADRLFWSMRKMGIEP 363
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 91/202 (45%), Gaps = 4/202 (1%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D T VM+ +Y + K A+ F ++ +G SY +++ Y A + L
Sbjct: 329 DLTTCNVMIDVYGQLDMAKEADRLFWSMRKMGIEPGIVSYNTLLRVYGEAELFGEAIHLF 388
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
R M +++ Y +++ Y + E A + + +Q GI P+A + +I+ + A
Sbjct: 389 RLMQRKDIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWDKA 448
Query: 324 GQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEAS 383
G+ +A FQ +R +G+E ++ A E+ + A L +L+R + +E +
Sbjct: 449 GKLDRAAMLFQKLRSSGIEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRETA 507
Query: 384 CTLAAWFKRLGVVEEVEHVLRE 405
T+ A G +EE V R+
Sbjct: 508 ITILAG---AGRIEEATWVFRQ 526
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 61/137 (44%)
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
+A ++A FEE++ D+ +Y +++ + + GM D L++M+ V
Sbjct: 167 RAKQWELAHGLFEEMRQRALAPDRYTYSTLITHFGKEGMFDSALSWLQKMEQDRVSGDLV 226
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
+Y L+ + A +F ++ +GI+PD +IN + A ++A M
Sbjct: 227 LYSNLIELSRKLCDYSKAISIFSRLKRSGISPDLVAYNSMINVFGKAKLFREARLLLPEM 286
Query: 337 RKAGLEPSDKCVALILS 353
R G+ P + +LS
Sbjct: 287 RAGGVMPDTVSYSTLLS 303
>gi|15242530|ref|NP_198814.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171449|sp|Q9FLD8.1|PP408_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39980, chloroplastic; Flags: Precursor
gi|10176990|dbj|BAB10222.1| unnamed protein product [Arabidopsis thaliana]
gi|332007115|gb|AED94498.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 678
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 124/285 (43%), Gaps = 31/285 (10%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ E N+ Y +I YGK M+ + A N + M+ RG + +T + ++ ++ KAG L
Sbjct: 394 KDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDR 453
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM----------------- 266
A F++++ G +D+ Y +M++AY R G++ + LL E+
Sbjct: 454 AATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAK 513
Query: 267 -----DAQEVYVGS---------EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARM 312
+A V+ + V+ ++ YS N VFE ++ AG PD+ +
Sbjct: 514 AGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNV 573
Query: 313 CALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLE 372
A+++NAY + +KA T ++ M++ G D+ +LS + LE
Sbjct: 574 IAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLE 633
Query: 373 RDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRETYSKIPG 417
D + KE +AA ++R + + V+ R PG
Sbjct: 634 SDPNVNSKELHLVVAALYERADKLNDASRVMNRMRERGILKPFPG 678
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/359 (19%), Positives = 142/359 (39%), Gaps = 54/359 (15%)
Query: 98 KMTKRCKAFVKQI--ICVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQ 155
K+ + + +K++ V P T + S LL+ +V K A L+V ++K + L L
Sbjct: 274 KLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEA--LSVFAEMKEVNCALDLT 331
Query: 156 V--------AELALLEES-----------FEANIRDYTKIIHGYGKKMQIQNAENTLLAM 196
+L +++E+ E N+ Y I+ YG+ A + M
Sbjct: 332 TCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLM 391
Query: 197 KRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGML 256
+R+ + VT M+ +Y K + A +E++ G + +Y +++ + +AG L
Sbjct: 392 QRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKL 451
Query: 257 DRGEVLLREMDAQEVYVGSEVYKALLRGY------------------------------- 285
DR L +++ + V + +Y+ ++ Y
Sbjct: 452 DRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITIL 511
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
+ G +E A VF +G D + +IN Y + F+ MR AG P
Sbjct: 512 AKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDS 571
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
+A++L+A K+ + +A +++ +G + E + + + E VE + +
Sbjct: 572 NVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQ 630
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 103/237 (43%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + MK D T +M+ +Y + +K A+ F
Sbjct: 294 NTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLF 353
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ + + SY +++ Y A + L R M +++ Y +++ Y
Sbjct: 354 WSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKT 413
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P+A + +I+ + AG+ +A T FQ +R +G+E
Sbjct: 414 MEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLY 473
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+ + +E + T+ A + G EE V R+
Sbjct: 474 QTMIVAYERVGLMGHAKRLLHELKLPD-NIPRETAITILA---KAGRTEEATWVFRQ 526
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 107/254 (42%), Gaps = 9/254 (3%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+ YGK + A + M G + + V+ + ++ +Y + A F E+K
Sbjct: 263 YNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMK 322
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVL---LREMDAQEVYVGSEVYKALLRGYSMNG 289
+ LD + M+ Y + M+ + L LR+MD + V Y +LR Y
Sbjct: 323 EVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVS---YNTILRVYGEAE 379
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
A +F +Q I + +I Y + +KA Q M+ G+EP+ +
Sbjct: 380 LFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYS 439
Query: 350 LILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLR 409
I+S K +L+RA L G + + T+ ++R+G++ + +L E L
Sbjct: 440 TIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLP 499
Query: 410 ETYSKIPGSRSIAL 423
+ IP +I +
Sbjct: 500 DN---IPRETAITI 510
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 86/195 (44%), Gaps = 5/195 (2%)
Query: 150 HPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLT 209
H L+ ++ + AL + + Y+ +I +GK+ +A + L M++ D V +
Sbjct: 175 HGLFDEMRQRALAPDRY-----TYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYS 229
Query: 210 VMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQ 269
++ + + + A F +K G D +Y SM+ Y +A + +L++EM+
Sbjct: 230 NLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEA 289
Query: 270 EVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
V + Y LL Y N A VF ++ D C ++I+ Y ++A
Sbjct: 290 GVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEA 349
Query: 330 YTAFQNMRKAGLEPS 344
F ++RK +EP+
Sbjct: 350 DRLFWSLRKMDIEPN 364
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 76/170 (44%), Gaps = 8/170 (4%)
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
+A +A F+E++ D+ +Y +++ ++ + GM D L++M+ V
Sbjct: 167 RAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLV 226
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
+Y L+ + A +F ++ +GITPD +IN Y A ++A + M
Sbjct: 227 LYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEM 286
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
+AG+ P+ + +LS + ++ AL ++ KE +C L
Sbjct: 287 NEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEM--------KEVNCAL 328
>gi|302794005|ref|XP_002978767.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
gi|300153576|gb|EFJ20214.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
Length = 521
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 144/370 (38%), Gaps = 80/370 (21%)
Query: 77 WIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRFMKPRRA 136
W++ G N TE + +S + + + + + NL W FM
Sbjct: 19 WLETGRNFTEIELIVLSPAASSLAQFLR-MQEDATAIWNALDNLPRGHDTWDNFMS---- 73
Query: 137 DWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAM 196
V+ + P Q+ E L +F ++ Y +I YGK + I++AE T M
Sbjct: 74 ---VVVHFWNYKDWPRVTQMCEWVLQGTAFRPDLGCYNLLIDAYGKSLNIEDAEKTFNRM 130
Query: 197 KRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG--------------------- 235
+ + ++ T V++ Y AG+ + AEE F +++ G
Sbjct: 131 QEALCVPNEETFGVLINGYRLAGSFEKAEELFVQMQKRGYSPGPLACNTFLHVLEDAKEY 190
Query: 236 ---------------EPLDKRSYGSMVMAYVRAGMLDRGEVLLREM-------------- 266
EP + +Y M++ Y +AG + E+L R M
Sbjct: 191 RRAEALFRDLEKYECEP-NIDTYNRMIVIYGKAGEPSKAEMLYRSMRRAMCPPNICTFTA 249
Query: 267 -----DAQEVYVGSE----------------VYKALLRGYSMNGNSEGAQRVFEAIQFAG 305
Q +Y +E Y AL+ YS G+ GA +F+ +Q G
Sbjct: 250 LMNAFARQGLYREAERYFDKLQEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTMQRNG 309
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
PD +LINAY AG + A F++M+ AG P+ K L+LSA + ++ A
Sbjct: 310 CFPDTVSHNILINAYGRAGLYEDAEKIFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAE 369
Query: 366 EFLIDLERDG 375
E + +ERDG
Sbjct: 370 ELVSAMERDG 379
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 87/177 (49%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E NI Y ++I YGK + AE +M+R + T T ++ +++ G + AE
Sbjct: 206 EPNIDTYNRMIVIYGKAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAER 265
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
F++++ D +Y +++ AY + G + + M + + + L+ Y
Sbjct: 266 YFDKLQEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDTVSHNILINAYG 325
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G E A+++F+++Q AG +P+ + LL++AY AG+ ++A M + G +P
Sbjct: 326 RAGLYEDAEKIFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKP 382
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 81/186 (43%), Gaps = 3/186 (1%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E ++ + Y ++ Y + A M+R G D V+ +++ Y +AG
Sbjct: 270 LQEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDTVSHNILINAYGRAGL 329
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ AE+ F+ ++ G + +S ++ AY RAG ++ E L+ M+ + +Y A
Sbjct: 330 YEDAEKIFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKPDTLIYNA 389
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAG---ITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
L+ Y ++G E + + + + PD LI Y AG KA FQ +
Sbjct: 390 LINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPKAEELFQGLA 449
Query: 338 KAGLEP 343
+ L P
Sbjct: 450 RLKLVP 455
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 75/159 (47%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
NI +T +++ + ++ + AE ++ + D ++ YS+ G+ A E F
Sbjct: 243 NICTFTALMNAFARQGLYREAERYFDKLQEFDYKPDHYAYNALMEAYSQGGSPAGALEIF 302
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ ++ G D S+ ++ AY RAG+ + E + + M + + LL Y+
Sbjct: 303 QTMQRNGCFPDTVSHNILINAYGRAGLYEDAEKIFKSMQSAGFSPNLKSNMLLLSAYARA 362
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQ 327
G E A+ + A++ G PD + LINAY ++G+ +
Sbjct: 363 GRVEEAEELVSAMERDGTKPDTLIYNALINAYGVSGRHE 401
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/162 (19%), Positives = 70/162 (43%), Gaps = 13/162 (8%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN----- 220
F N++ ++ Y + +++ AE + AM+R G D + ++ Y +G
Sbjct: 345 FSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKPDTLIYNALINAYGVSGRHEDME 404
Query: 221 ---LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
KM + + ++ K D +Y +++ Y +AG + + E L + + ++ +
Sbjct: 405 ALLAKMVKSSSKQTKP-----DIGTYNTLIQVYAQAGFIPKAEELFQGLARLKLVPDATT 459
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+ AL+ GY+ + + + +G DA +L +A
Sbjct: 460 WTALMGGYAKKKLYRKCTSILKKMLESGCRADAVTARVLFSA 501
>gi|125580966|gb|EAZ21897.1| hypothetical protein OsJ_05550 [Oryza sativa Japonica Group]
Length = 595
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 106/241 (43%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E N Y + G K + A MKR + T T+M+ +Y KA
Sbjct: 238 EHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPM 297
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
+ + F E+K +G + +Y ++V A+ R G+ ++ E + EM Y AL+
Sbjct: 298 SSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALM 357
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
YS G +GA +F +Q G PD +L++AY AG + A F+ +++ G+
Sbjct: 358 EAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMS 417
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ K L+L+A + R E + L + G A + + R G ++++E +
Sbjct: 418 PTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERL 477
Query: 403 L 403
Sbjct: 478 F 478
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 122/292 (41%), Gaps = 15/292 (5%)
Query: 115 PETGNL-SDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDY 173
P T NL DL+ V+F ++ D L + V E L SF +I Y
Sbjct: 133 PSTHNLFDDLVNVAVQFRMNKKWD--------------LIIPVCEWILYRSSFRPDIICY 178
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKL 233
+I YGKK Q+ AE+ +A+ + + T +++ Y AG+L AE E++
Sbjct: 179 NLLIESYGKKRQLNKAESIYMALLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISEMRE 238
Query: 234 LGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEG 293
G P + Y + + ++A ++ + + M + +E + ++ Y
Sbjct: 239 HGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPMS 298
Query: 294 AQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILS 353
+ +VF ++ G P+ L+NA+ G +KA F+ M++AG EP ++
Sbjct: 299 SMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALME 358
Query: 354 ACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
A + A E ++ G + + L + R G+ E+ E V E
Sbjct: 359 AYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEE 410
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
E AN +T +I+ YGK Q ++ MK G + T T +V +++ G +
Sbjct: 274 ERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEK 333
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
AEE FEE++ G D +Y +++ AY RAG+ + M Y L+
Sbjct: 334 AEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVD 393
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
Y G E A+ VFE ++ G++P + LL+ A+ +G + + + K+GL P
Sbjct: 394 AYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTP 453
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDG 375
+ +L+A + +L+ +ER G
Sbjct: 454 DTFALNAMLNAYARAGRLDDMERLFAAMERRG 485
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 1/158 (0%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E ++ Y ++ Y + Q A M+ G D+ + ++V Y +AG + AE
Sbjct: 347 EPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEA 406
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
FEE+K G +S+ ++ A+ R+G R E ++ ++ + + A+L Y+
Sbjct: 407 VFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYA 466
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAG 324
G + +R+F A++ G D + +NAY AG
Sbjct: 467 RAGRLDDMERLFAAMERRG-DADVGTYNVAVNAYGRAG 503
>gi|110740599|dbj|BAE98404.1| hypothetical protein [Arabidopsis thaliana]
Length = 546
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 124/285 (43%), Gaps = 31/285 (10%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ E N+ Y +I YGK M+ + A N + M+ RG + +T + ++ ++ KAG L
Sbjct: 262 KDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDR 321
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM----------------- 266
A F++++ G +D+ Y +M++AY R G++ + LL E+
Sbjct: 322 AATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAK 381
Query: 267 -----DAQEVYVGS---------EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARM 312
+A V+ + V+ ++ YS N VFE ++ AG PD+ +
Sbjct: 382 AGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNV 441
Query: 313 CALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLE 372
A+++NAY + +KA T ++ M++ G D+ +LS + LE
Sbjct: 442 IAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLE 501
Query: 373 RDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRETYSKIPG 417
D + KE +AA ++R + + V+ R PG
Sbjct: 502 SDPNVNSKELHLVVAALYERADKLNDASRVMNRMRERGILKPFPG 546
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/359 (19%), Positives = 142/359 (39%), Gaps = 54/359 (15%)
Query: 98 KMTKRCKAFVKQI--ICVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQ 155
K+ + + +K++ V P T + S LL+ +V K A L+V ++K + L L
Sbjct: 142 KLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEA--LSVFAEMKEVNCALDLT 199
Query: 156 V--------AELALLEES-----------FEANIRDYTKIIHGYGKKMQIQNAENTLLAM 196
+L +++E+ E N+ Y I+ YG+ A + M
Sbjct: 200 TCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLM 259
Query: 197 KRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGML 256
+R+ + VT M+ +Y K + A +E++ G + +Y +++ + +AG L
Sbjct: 260 QRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKL 319
Query: 257 DRGEVLLREMDAQEVYVGSEVYKALLRGY------------------------------- 285
DR L +++ + V + +Y+ ++ Y
Sbjct: 320 DRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITIL 379
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
+ G +E A VF +G D + +IN Y + F+ MR AG P
Sbjct: 380 AKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDS 439
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
+A++L+A K+ + +A +++ +G + E + + + E VE + +
Sbjct: 440 NVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQ 498
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 103/237 (43%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + MK D T +M+ +Y + +K A+ F
Sbjct: 162 NTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLF 221
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ + + SY +++ Y A + L R M +++ Y +++ Y
Sbjct: 222 WSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKT 281
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P+A + +I+ + AG+ +A T FQ +R +G+E
Sbjct: 282 MEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLY 341
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+ + +E + T+ A + G EE V R+
Sbjct: 342 QTMIVAYERVGLMGHAKRLLHELKLPD-NIPRETAITILA---KAGRTEEATWVFRQ 394
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 107/254 (42%), Gaps = 9/254 (3%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+ YGK + A + M G + + V+ + ++ +Y + A F E+K
Sbjct: 131 YNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMK 190
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVL---LREMDAQEVYVGSEVYKALLRGYSMNG 289
+ LD + M+ Y + M+ + L LR+MD + V Y +LR Y
Sbjct: 191 EVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVS---YNTILRVYGEAE 247
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
A +F +Q I + +I Y + +KA Q M+ G+EP+ +
Sbjct: 248 LFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYS 307
Query: 350 LILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLR 409
I+S K +L+RA L G + + T+ ++R+G++ + +L E L
Sbjct: 308 TIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLP 367
Query: 410 ETYSKIPGSRSIAL 423
+ IP +I +
Sbjct: 368 DN---IPRETAITI 378
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 86/195 (44%), Gaps = 5/195 (2%)
Query: 150 HPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLT 209
H L+ ++ + AL + + Y+ +I +GK+ +A + L M++ D V +
Sbjct: 43 HGLFDEMRQRALAPDRYT-----YSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYS 97
Query: 210 VMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQ 269
++ + + + A F +K G D +Y SM+ Y +A + +L++EM+
Sbjct: 98 NLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEA 157
Query: 270 EVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
V + Y LL Y N A VF ++ D C ++I+ Y ++A
Sbjct: 158 GVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEA 217
Query: 330 YTAFQNMRKAGLEPS 344
F ++RK +EP+
Sbjct: 218 DRLFWSLRKMDIEPN 232
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 76/170 (44%), Gaps = 8/170 (4%)
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
+A +A F+E++ D+ +Y +++ ++ + GM D L++M+ V
Sbjct: 35 RAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLV 94
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
+Y L+ + A +F ++ +GITPD +IN Y A ++A + M
Sbjct: 95 LYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEM 154
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
+AG+ P+ + +LS + ++ AL ++ KE +C L
Sbjct: 155 NEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEM--------KEVNCAL 196
>gi|162460542|ref|NP_001105869.1| pentatricopeptide repeat protein [Zea mays]
gi|95931777|gb|ABF57644.1| pentatricopeptide repeat protein [Zea mays]
Length = 886
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 128/299 (42%), Gaps = 18/299 (6%)
Query: 114 SPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHP----------LYLQVAELALLE 163
SP D + R ++ R DW AV+ + + P Y + +
Sbjct: 212 SPWHKGREDACREFRRVLESRPEDWQAVVSAFERIPKPSRREFGLMVVYYAKRGDKHHAR 271
Query: 164 ESFE--------ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
+FE N +T ++H Y ++ A + + MK G VT ++++ Y
Sbjct: 272 ATFENMRARGIEPNAFVFTSLVHAYAVAGDMRGALSCVEEMKSEGIEMTVVTYSILISGY 331
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
K + + A+ F+E K + L+ Y +++ A+ ++G +DR E L+REM+ +
Sbjct: 332 GKTNDAQSADNLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPI 391
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
+VY +++ GY++ + + VFE ++ G P LIN Y G+ KA +
Sbjct: 392 DVYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTIISYGCLINLYVKVGKVPKAIAISKE 451
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
M G++ ++K +++++ + A D+ + G + L F ++G
Sbjct: 452 MESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMG 510
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 110/226 (48%), Gaps = 1/226 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +IHG +K Q++ A + L M G ++ T T+++ Y+ +G++ A E F +IK
Sbjct: 569 YNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIK 628
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G LD Y +++ A ++G + + REM Q++ + +Y L+ G++ G+
Sbjct: 629 ESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVW 688
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + ++ GI P+ INA AG Q+A Q M GL+P+ K ++
Sbjct: 689 EAADLLKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLI 748
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEA-SCTLAAWFKRLGVVE 397
+ + +RAL+ +++ G + A C + + R V+E
Sbjct: 749 KGWARVSLPDRALKCFEEMKSAGLKPDEAAYHCLVTSLLSRATVME 794
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 103/247 (41%), Gaps = 35/247 (14%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
E E + Y+ +I GYGK Q+A+N K + + + + ++ + ++GN+
Sbjct: 315 EGIEMTVVTYSILISGYGKTNDAQSADNLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDR 374
Query: 224 AEE-----------------------------------TFEEIKLLGEPLDKRSYGSMVM 248
AEE FE +K G SYG ++
Sbjct: 375 AEELVREMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTIISYGCLIN 434
Query: 249 AYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITP 308
YV+ G + + + +EM++ + ++ Y L+ G+ + A +FE + +G+ P
Sbjct: 435 LYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQP 494
Query: 309 DARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFL 368
D + LL+ A+ G +A F+ M+K ++PS++ I+ + RA + L
Sbjct: 495 DRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRPIIEGFAVAGDMKRAFDTL 554
Query: 369 IDLERDG 375
+ R G
Sbjct: 555 DLMRRSG 561
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/256 (19%), Positives = 107/256 (41%), Gaps = 4/256 (1%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E F+ I Y +I+ Y K ++ A M+ G + T ++++ + +
Sbjct: 417 LKECGFKPTIISYGCLINLYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHD 476
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A FE++ G D+ Y +V A+ + G +DR + M + + + ++
Sbjct: 477 FANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRP 536
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G+++ G+ + A + ++ +G P LI+ Q +KA + M AG
Sbjct: 537 IIEGFAVAGDMKRAFDTLDLMRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAG 596
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+ P++ +I+ + +A E+ ++ G + TL + G ++
Sbjct: 597 IAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSAL 656
Query: 401 HVLREYGLRETYSKIP 416
V RE ++ KIP
Sbjct: 657 AVTREM----SFQKIP 668
>gi|297805706|ref|XP_002870737.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316573|gb|EFH46996.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 680
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 127/284 (44%), Gaps = 34/284 (11%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ E N+ Y +I YGK M+ + A N + M+ RG + +T + ++ ++ KAG L
Sbjct: 396 KDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDR 455
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM----------------- 266
A F++++ G +D+ Y +M++AY R G++ + LL E+
Sbjct: 456 AATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAK 515
Query: 267 -----DAQEVYVGS---------EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARM 312
+A V+ + V+ ++ YS N VFE ++ AG PD+
Sbjct: 516 AGSTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNA 575
Query: 313 CALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLE 372
A+++NAY + +KA T ++ M++ G D+ +LS + LE
Sbjct: 576 IAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFERLE 635
Query: 373 RDGFMVGKEASCTLAAWFKRLGVVEEVEHV---LREYGLRETYS 413
D + KE +AA ++R + + V +RE G+ + +S
Sbjct: 636 SDPNVNSKELHLVVAALYERADKLNDASRVMNRMRERGILKPFS 679
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/358 (20%), Positives = 144/358 (40%), Gaps = 54/358 (15%)
Query: 98 KMTKRCKAFVKQI--ICVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQ 155
K+ K + +K++ VSP T + S LL+ +V K A L+V ++K + PL L
Sbjct: 276 KLFKEARVLIKEMNEAGVSPNTVSYSTLLSVYVENHKFLEA--LSVFAEMKEVNCPLDLT 333
Query: 156 V--------AELALLEES-----------FEANIRDYTKIIHGYGKKMQIQNAENTLLAM 196
+L +++E+ E N+ Y I+ YG+ A + M
Sbjct: 334 TCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLM 393
Query: 197 KRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGML 256
+R+ + VT M+ +Y K + A +E++ G + +Y +++ + +AG L
Sbjct: 394 QRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKL 453
Query: 257 DRGEVLLREMDAQEVYVGSEVYKALLRGY------------------------------- 285
DR L +++ + V + +Y+ ++ Y
Sbjct: 454 DRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITIL 513
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
+ G++E A VF +G D + +IN Y + F+ MR AG P
Sbjct: 514 AKAGSTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDS 573
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+A++L+A K+ + +A +++ +G + E + + + E VE +
Sbjct: 574 NAIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLF 631
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 107/254 (42%), Gaps = 9/254 (3%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+ YGK + A + M G + V+ + ++ +Y + A F E+K
Sbjct: 265 YNSMINVYGKAKLFKEARVLIKEMNEAGVSPNTVSYSTLLSVYVENHKFLEALSVFAEMK 324
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVL---LREMDAQEVYVGSEVYKALLRGYSMNG 289
+ PLD + M+ Y + M+ + L LR+MD + V Y +LR Y
Sbjct: 325 EVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVS---YNTILRVYGEAE 381
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
A +F +Q I + +I Y + +KA Q M+ G+EP+ +
Sbjct: 382 LFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYS 441
Query: 350 LILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLR 409
I+S K +L+RA L G + + T+ ++R+G++ + +L E L
Sbjct: 442 TIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLP 501
Query: 410 ETYSKIPGSRSIAL 423
+ IP +I +
Sbjct: 502 DN---IPRETAITI 512
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 104/243 (42%), Gaps = 4/243 (1%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E N Y+ ++ Y + + A + MK D T +M+ +Y + +K
Sbjct: 290 EAGVSPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCPLDLTTCNIMIDVYGQLDMVK 349
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A+ F ++ + + SY +++ Y A + L R M +++ Y ++
Sbjct: 350 EADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMI 409
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
+ Y E A + + +Q GI P+A + +I+ + AG+ +A T FQ +R +G+E
Sbjct: 410 KIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVE 469
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
++ A E+ + A L +L+ + +E + T+ A + G EE V
Sbjct: 470 IDQVLYQTMIVAYERVGLMGHAKRLLHELKLPD-NIPRETAITILA---KAGSTEEATWV 525
Query: 403 LRE 405
R+
Sbjct: 526 FRQ 528
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 86/195 (44%), Gaps = 5/195 (2%)
Query: 150 HPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLT 209
H L+ ++ + AL + + Y+ +I +GK+ +A + L M++ D V +
Sbjct: 177 HGLFDEMRQRALAPDRY-----TYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYS 231
Query: 210 VMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQ 269
++ + + + A F +K G D +Y SM+ Y +A + VL++EM+
Sbjct: 232 NLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFKEARVLIKEMNEA 291
Query: 270 EVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
V + Y LL Y N A VF ++ D C ++I+ Y ++A
Sbjct: 292 GVSPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCPLDLTTCNIMIDVYGQLDMVKEA 351
Query: 330 YTAFQNMRKAGLEPS 344
F ++RK +EP+
Sbjct: 352 DRLFWSLRKMDIEPN 366
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 76/170 (44%), Gaps = 8/170 (4%)
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
+A +A F+E++ D+ +Y +++ ++ + GM D L++M+ V
Sbjct: 169 RAKQFGIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLV 228
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
+Y L+ + A +F ++ +GITPD +IN Y A ++A + M
Sbjct: 229 LYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFKEARVLIKEM 288
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
+AG+ P+ + +LS + ++ AL ++ KE +C L
Sbjct: 289 NEAGVSPNTVSYSTLLSVYVENHKFLEALSVFAEM--------KEVNCPL 330
>gi|224143015|ref|XP_002324819.1| predicted protein [Populus trichocarpa]
gi|222866253|gb|EEF03384.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 126/290 (43%), Gaps = 5/290 (1%)
Query: 92 ISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRF----MKPRRADWLAVLKQLKL 147
ISQ F +I E+GN+ + + + MKP + + ++K +
Sbjct: 71 ISQVEENGMNPDSIFFNAVINAFSESGNMESAMETFWKMQENGMKPTTSTYNTLIKGYGI 130
Query: 148 MEHPL-YLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQV 206
P +++ EL E + + N+R Y ++ + K +I A N + M G D V
Sbjct: 131 AGKPEESVKLLELMSQEGNVKPNLRTYNVLVRAWCNKKRITEAWNVVYKMIASGIQPDVV 190
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
T + Y++ G L AE E++ G ++R+ G ++ Y + G + M
Sbjct: 191 TYNTIATAYAQKGALDQAEGVILEMQNNGVQPNERTCGIIMSGYCKEGRIREALRFAYRM 250
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
++ ++ +L++G+ + +G V ++ G+ PD + ++NA+ AG
Sbjct: 251 KELGIHPNLVIFNSLIKGFVAIMDRDGVDEVLNLMEEFGVKPDVITFSTIMNAWSTAGFM 310
Query: 327 QKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+K F +M KAG+EP +++ + + +A E L + + GF
Sbjct: 311 EKCREIFDDMVKAGIEPDAHAYSILAKGYVRAQEPEKAEELLTTMIKSGF 360
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 123/272 (45%), Gaps = 11/272 (4%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+L+E + ++ YT ++ + + + + + ++ G D + ++ +S++G
Sbjct: 38 SLIEGGHKPSLISYTTLLAALTMQKRFDSIYSIISQVEENGMNPDSIFFNAVINAFSESG 97
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV-- 277
N++ A ETF +++ G +Y +++ Y AG + V L E+ +QE V +
Sbjct: 98 NMESAMETFWKMQENGMKPTTSTYNTLIKGYGIAGKPEES-VKLLELMSQEGNVKPNLRT 156
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y L+R + A V + +GI PD + AY G +A M+
Sbjct: 157 YNVLVRAWCNKKRITEAWNVVYKMIASGIQPDVVTYNTIATAYAQKGALDQAEGVILEMQ 216
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG----FMVGKEASCTLAAWFKRL 393
G++P+++ +I+S KE ++ AL F ++ G ++ A R
Sbjct: 217 NNGVQPNERTCGIIMSGYCKEGRIREALRFAYRMKELGIHPNLVIFNSLIKGFVAIMDRD 276
Query: 394 GVVEEVEHVLREYGLRE---TYSKIPGSRSIA 422
G V+EV +++ E+G++ T+S I + S A
Sbjct: 277 G-VDEVLNLMEEFGVKPDVITFSTIMNAWSTA 307
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 83/192 (43%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E N+ + +I G+ M + L M+ G D +T + ++ +S AG ++
Sbjct: 252 ELGIHPNLVIFNSLIKGFVAIMDRDGVDEVLNLMEEFGVKPDVITFSTIMNAWSTAGFME 311
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
E F+++ G D +Y + YVRA ++ E LL M ++ ++
Sbjct: 312 KCREIFDDMVKAGIEPDAHAYSILAKGYVRAQEPEKAEELLTTMIKSGFQPNVVIFTTVI 371
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G+ G + A RVF+ + GI+P+ + LI + A Q KA Q M + ++
Sbjct: 372 SGWCSAGKMDYAVRVFDKMCQRGISPNLKTFETLIWGFAEARQPWKAEEILQIMTEFEVQ 431
Query: 343 PSDKCVALILSA 354
P + L+ A
Sbjct: 432 PEKSTMLLVAEA 443
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/188 (19%), Positives = 81/188 (43%), Gaps = 1/188 (0%)
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
G + AE F + G SY +++ A D ++ +++ + S +
Sbjct: 27 GKPQEAESIFYSLIEGGHKPSLISYTTLLAALTMQKRFDSIYSIISQVEENGMNPDSIFF 86
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
A++ +S +GN E A F +Q G+ P LI Y +AG+ +++ + M +
Sbjct: 87 NAVINAFSESGNMESAMETFWKMQENGMKPTTSTYNTLIKGYGIAGKPEESVKLLELMSQ 146
Query: 339 AG-LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
G ++P+ + +++ A + ++ A + + G T+A + + G ++
Sbjct: 147 EGNVKPNLRTYNVLVRAWCNKKRITEAWNVVYKMIASGIQPDVVTYNTIATAYAQKGALD 206
Query: 398 EVEHVLRE 405
+ E V+ E
Sbjct: 207 QAEGVILE 214
>gi|223948189|gb|ACN28178.1| unknown [Zea mays]
gi|413935735|gb|AFW70286.1| hypothetical protein ZEAMMB73_980179 [Zea mays]
Length = 597
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 106/231 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y + G K + A MK+ + T T+M+ +Y KA + F E+K
Sbjct: 245 YNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLMINVYGKANQPMSSLRVFREMK 304
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+G + +Y ++V A+ R G+ ++ E + EM Y AL+ YS G +
Sbjct: 305 SVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQ 364
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
GA +F ++ G PD +L++A+ AG Q+A AFQ +++ G+ P+ K L+L
Sbjct: 365 GASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLL 424
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
SA + + R E + L + G A + + R G ++++E +
Sbjct: 425 SAHARSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLF 475
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 119/280 (42%), Gaps = 6/280 (2%)
Query: 137 DWLAVLKQLKLMEH--PLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLL 194
D + V QL+L P+ + V E L SF +I Y +I YG+K Q+ AE +
Sbjct: 138 DIVNVAVQLRLNRQWEPI-ITVCEWVLRRSSFRPDIICYNLLIDAYGQKRQLSEAEAAYM 196
Query: 195 AMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG 254
A+ + + T +++ Y +G L AE E++ G P Y + + ++A
Sbjct: 197 ALLEARCVPTEDTYALLLRAYCGSGQLHRAEGVISEMQRNGIPPTATVYNAYLDGLLKAR 256
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
++ + + M + +E Y ++ Y + RVF ++ G P+
Sbjct: 257 CSEKAVEVYQRMKKERCRTNTETYTLMINVYGKANQPMSSLRVFREMKSVGCKPNICTYT 316
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
L+NA+ G +KA F+ M++AG EP ++ A + A E +E
Sbjct: 317 ALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHM 376
Query: 375 GFMVGKEASCTLAAWFKRLGVVEEVEHV---LREYGLRET 411
G + + L F R G+ +E E L++ G+R T
Sbjct: 377 GCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQGMRPT 416
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 76/157 (48%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
NI YT +++ + ++ + AE M++ G D ++ YS+AG + A E F
Sbjct: 311 NICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIF 370
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G D+ SY +V A+ RAG+ E +E+ Q + + + LL ++ +
Sbjct: 371 SLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARS 430
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQ 325
GN + V + +G+ PD ++NAY AG+
Sbjct: 431 GNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGR 467
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 89/212 (41%), Gaps = 4/212 (1%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E + Y ++ +G+ Q AE +K++G + +++ ++++GN+ EE
Sbjct: 379 EPDRASYNILVDAFGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEE 438
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG----SEVYKALL 282
++ G D + +M+ AY RAG LD E L M+ + + + Y ++
Sbjct: 439 VMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAMERGDGAIAGAPDTSTYNVMV 498
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
Y G + + F ++ G+ D I AY + + F+ M AG
Sbjct: 499 NAYGRAGYLDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQCLRVFEEMVDAGCY 558
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERD 374
P ++L+AC E Q+ + + + +D
Sbjct: 559 PDAGTAKVLLAACSDERQVEQVKAIVRSMHKD 590
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 85/184 (46%), Gaps = 6/184 (3%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+ E ++ Y ++ Y + Q A M+ G D+ + ++V + +AG +
Sbjct: 340 QAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQ 399
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
AE F+E+K G +S+ ++ A+ R+G + R E ++ ++ + + A+L
Sbjct: 400 EAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAML 459
Query: 283 RGYSMNGNSEGAQRVFEAIQ-----FAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y G + +R+F A++ AG PD +++NAY AG + AF+++
Sbjct: 460 NAYGRAGRLDDMERLFAAMERGDGAIAG-APDTSTYNVMVNAYGRAGYLDRMEAAFRSLA 518
Query: 338 KAGL 341
GL
Sbjct: 519 ARGL 522
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 77/183 (42%), Gaps = 6/183 (3%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L ++ ++ + ++ + + + E + + + G D L M+ Y +AG
Sbjct: 408 LKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGR 467
Query: 221 LKMAEETFEEIK-----LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
L E F ++ + G P D +Y MV AY RAG LDR E R + A+ +
Sbjct: 468 LDDMERLFAAMERGDGAIAGAP-DTSTYNVMVNAYGRAGYLDRMEAAFRSLAARGLAADV 526
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
+ + + Y+ RVFE + AG PDA +L+ A Q ++ ++
Sbjct: 527 VTWTSRIGAYARKKEYGQCLRVFEEMVDAGCYPDAGTAKVLLAACSDERQVEQVKAIVRS 586
Query: 336 MRK 338
M K
Sbjct: 587 MHK 589
>gi|125556718|gb|EAZ02324.1| hypothetical protein OsI_24426 [Oryza sativa Indica Group]
gi|125598467|gb|EAZ38247.1| hypothetical protein OsJ_22623 [Oryza sativa Japonica Group]
Length = 478
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 130/277 (46%), Gaps = 6/277 (2%)
Query: 131 MKPRRADWLAVLKQLKLMEHPLYLQVAELALL---EESFEANIRDYTKIIHGYGKKMQIQ 187
++P A + A+L+ L H L++A+ LL ++ N R Y +++ Y + +++
Sbjct: 117 LRPDAAHYNALLEGLLSTAH---LRLADRLLLQMADDGVARNRRTYMLLLNAYARAGRLE 173
Query: 188 NAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMV 247
++ L MKRRG D + +V +Y G K A + E++ LG LD + Y ++
Sbjct: 174 DSWWVLGEMKRRGIRLDTAGYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLI 233
Query: 248 MAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGIT 307
+ + G L + +M A+ V + +L+R + GN++ A R F A+Q G+
Sbjct: 234 DTFGKYGQLADARKVFDKMCAEGVKPDITTWNSLIRWHCRVGNTKRALRFFAAMQEEGMY 293
Query: 308 PDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
PD ++ +I+ G+ + F MR GL+ S A+++ + A +
Sbjct: 294 PDPKIFVTIISRLGEQGKWDEIKKLFHGMRNRGLKESGAVYAVLVDIYGQYGHFRDAHDC 353
Query: 368 LIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
+ L+ + + C LA + + G+ E+ +VL+
Sbjct: 354 VAALKAENLQLSPSIFCVLANAYAQQGLCEQTVNVLQ 390
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 103/234 (44%), Gaps = 3/234 (1%)
Query: 120 LSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHG 179
L+D+ AA +R P A + +++ L L + L + + Y ++ G
Sbjct: 74 LADMQAAGLR---PSGAAYARLIRALARAGRTLEAEALLLEMRRLGLRPDAAHYNALLEG 130
Query: 180 YGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLD 239
++ A+ LL M G ++ T +++ Y++AG L+ + E+K G LD
Sbjct: 131 LLSTAHLRLADRLLLQMADDGVARNRRTYMLLLNAYARAGRLEDSWWVLGEMKRRGIRLD 190
Query: 240 KRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFE 299
Y ++V Y GM + L+ EM V + ++Y L+ + G A++VF+
Sbjct: 191 TAGYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADARKVFD 250
Query: 300 AIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILS 353
+ G+ PD LI + G +++A F M++ G+ P K I+S
Sbjct: 251 KMCAEGVKPDITTWNSLIRWHCRVGNTKRALRFFAAMQEEGMYPDPKIFVTIIS 304
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 89/230 (38%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E E +++ Y +I +GK Q+ +A M G D T ++ + + GN K
Sbjct: 219 ELGVELDVKIYNGLIDTFGKYGQLADARKVFDKMCAEGVKPDITTWNSLIRWHCRVGNTK 278
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A F ++ G D + + +++ G D + L M + + VY L+
Sbjct: 279 RALRFFAAMQEEGMYPDPKIFVTIISRLGEQGKWDEIKKLFHGMRNRGLKESGAVYAVLV 338
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
Y G+ A A++ + + +L NAY G ++ Q M G+E
Sbjct: 339 DIYGQYGHFRDAHDCVAALKAENLQLSPSIFCVLANAYAQQGLCEQTVNVLQLMEAEGIE 398
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKR 392
P+ + L+++A + AL L ++ G TL F R
Sbjct: 399 PNLVMLNLLINAFGTAGRHLEALAVLQHIKDSGMSPDVVTYTTLMKAFMR 448
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 75/174 (43%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
A+ EE + + + II G++ + + M+ RG V+V +Y + G
Sbjct: 286 AMQEEGMYPDPKIFVTIISRLGEQGKWDEIKKLFHGMRNRGLKESGAVYAVLVDIYGQYG 345
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ + A + +K L + + AY + G+ ++ +L+ M+A+ + +
Sbjct: 346 HFRDAHDCVAALKAENLQLSPSIFCVLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLN 405
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAF 333
L+ + G A V + I+ +G++PD L+ A+ A + +KA F
Sbjct: 406 LLINAFGTAGRHLEALAVLQHIKDSGMSPDVVTYTTLMKAFMRAKKFEKACPLF 459
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 67/162 (41%)
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI 301
+Y ++ A RAG E LL EM + + Y ALL G + A R+ +
Sbjct: 88 AYARLIRALARAGRTLEAEALLLEMRRLGLRPDAAHYNALLEGLLSTAHLRLADRLLLQM 147
Query: 302 QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQL 361
G+ + R LL+NAY AG+ + ++ M++ G+ + ++
Sbjct: 148 ADDGVARNRRTYMLLLNAYARAGRLEDSWWVLGEMKRRGIRLDTAGYSTLVRLYRDNGMW 207
Query: 362 NRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+A + +++++ G + + L F + G + + V
Sbjct: 208 KKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADARKVF 249
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 50/125 (40%), Gaps = 2/125 (1%)
Query: 283 RGYSMNGNSEGAQ--RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
RG + S+ A R+ +Q AG+ P A LI A AG++ +A MR+ G
Sbjct: 57 RGIQHHAGSDLASSLRLLADMQAAGLRPSGAAYARLIRALARAGRTLEAEALLLEMRRLG 116
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
L P +L L A L+ + DG + L + R G +E+
Sbjct: 117 LRPDAAHYNALLEGLLSTAHLRLADRLLLQMADDGVARNRRTYMLLLNAYARAGRLEDSW 176
Query: 401 HVLRE 405
VL E
Sbjct: 177 WVLGE 181
>gi|414884149|tpg|DAA60163.1| TPA: hypothetical protein ZEAMMB73_830458 [Zea mays]
Length = 378
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 111/234 (47%)
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA 224
F ++R Y+ +IHG K Q + + AMK+RGF D +V + K+G + A
Sbjct: 54 GFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKA 113
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
E EE+K+ P +YGS++ + LD +L E ++ + + VY +L+ G
Sbjct: 114 YEALEEMKVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDG 173
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
+ G + A + E + G+ P+ L++A A + +A FQ+M++ P+
Sbjct: 174 FGKVGRIDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPN 233
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
+++++ + + N+A F ++++ G + T+ + ++G + +
Sbjct: 234 TYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITD 287
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
+K GF+ D + ++++ +KAG + F +K G LD R+Y ++V + ++G
Sbjct: 50 IKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGK 109
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
+D+ L EM + V Y +++ G + + A +FE + GI + + +
Sbjct: 110 VDKAYEALEEMKVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSS 169
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
LI+ + G+ +AY + M K GL P+ ++ A K ++N AL
Sbjct: 170 LIDGFGKVGRIDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEAL 219
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 87/208 (41%), Gaps = 4/208 (1%)
Query: 161 LLEES----FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS 216
L EE+ E N+ Y+ +I G+GK +I A L M ++G + T ++
Sbjct: 151 LFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLAPNVYTWNSLMDALV 210
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
KA + A F+ +K + + +Y ++ R ++ V +EM Q +
Sbjct: 211 KAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVV 270
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
Y ++ G + GN A +FE + G PDA LI A ++ +AY F+
Sbjct: 271 TYTTMISGLAKVGNITDACSLFERFKANGGIPDAASFNALIEGMSHANRAIEAYHVFEET 330
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRA 364
R G + K +L A K + +A
Sbjct: 331 RLRGCRINVKACISLLDALNKAECIEQA 358
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 81/197 (41%), Gaps = 3/197 (1%)
Query: 180 YGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLD 239
+G+K ++ M RRG D L + KAG+++ FE+IK G D
Sbjct: 2 HGRK---EDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPD 58
Query: 240 KRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFE 299
RSY ++ +AG + M + + + Y A++ G+ +G + A E
Sbjct: 59 VRSYSILIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALE 118
Query: 300 AIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKEN 359
++ + P +I+ + +AY F+ + G+E + + ++ K
Sbjct: 119 EMKVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVG 178
Query: 360 QLNRALEFLIDLERDGF 376
+++ A L ++ + G
Sbjct: 179 RIDEAYLILEEMMKKGL 195
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/135 (18%), Positives = 54/135 (40%)
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
M+G E ++F+ + G PD + ++ AG +K F++++ G P +
Sbjct: 1 MHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVR 60
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREY 406
++++ K Q +++ GF + A + F + G V++ L E
Sbjct: 61 SYSILIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEM 120
Query: 407 GLRETYSKIPGSRSI 421
++ + SI
Sbjct: 121 KVKHVPPTVATYGSI 135
>gi|115444491|ref|NP_001046025.1| Os02g0170000 [Oryza sativa Japonica Group]
gi|49388067|dbj|BAD25179.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535556|dbj|BAF07939.1| Os02g0170000 [Oryza sativa Japonica Group]
Length = 397
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 106/241 (43%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E N Y + G K + A MKR + T T+M+ +Y KA
Sbjct: 40 EHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPM 99
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
+ + F E+K +G + +Y ++V A+ R G+ ++ E + EM Y AL+
Sbjct: 100 SSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALM 159
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
YS G +GA +F +Q G PD +L++AY AG + A F+ +++ G+
Sbjct: 160 EAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMS 219
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ K L+L+A + R E + L + G A + + R G ++++E +
Sbjct: 220 PTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERL 279
Query: 403 L 403
Sbjct: 280 F 280
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
E AN +T +I+ YGK Q ++ MK G + T T +V +++ G +
Sbjct: 76 ERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEK 135
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
AEE FEE++ G D +Y +++ AY RAG+ + M Y L+
Sbjct: 136 AEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVD 195
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
Y G E A+ VFE ++ G++P + LL+ A+ +G + + + K+GL P
Sbjct: 196 AYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTP 255
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDG 375
+ +L+A + +L+ +ER G
Sbjct: 256 DTFALNAMLNAYARAGRLDDMERLFAAMERRG 287
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 83/199 (41%)
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
T +++ Y AG+L AE E++ G P + Y + + ++A ++ + + M
Sbjct: 14 TYALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRM 73
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
+ +E + ++ Y + +VF ++ G P+ L+NA+ G
Sbjct: 74 KRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLC 133
Query: 327 QKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
+KA F+ M++AG EP ++ A + A E ++ G + + L
Sbjct: 134 EKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNIL 193
Query: 387 AAWFKRLGVVEEVEHVLRE 405
+ R G+ E+ E V E
Sbjct: 194 VDAYGRAGLHEDAEAVFEE 212
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 1/158 (0%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E ++ Y ++ Y + Q A M+ G D+ + ++V Y +AG + AE
Sbjct: 149 EPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEA 208
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
FEE+K G +S+ ++ A+ R+G R E ++ ++ + + A+L Y+
Sbjct: 209 VFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYA 268
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAG 324
G + +R+F A++ G D + +NAY AG
Sbjct: 269 RAGRLDDMERLFAAMERRG-DADVGTYNVAVNAYGRAG 305
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 92/245 (37%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
+ALLE Y ++ Y + AE + M+ G + + KA
Sbjct: 1 MALLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKA 60
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
+ A E ++ +K + ++ M+ Y +A + EM + Y
Sbjct: 61 RCTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTY 120
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
AL+ ++ G E A+ VFE +Q AG PD L+ AY AG Q A F M+
Sbjct: 121 TALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQH 180
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
G EP +++ A + A +L++ G ++ L A R G
Sbjct: 181 MGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATR 240
Query: 399 VEHVL 403
E V+
Sbjct: 241 CEEVM 245
>gi|168045490|ref|XP_001775210.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673423|gb|EDQ59946.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 404
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 96/197 (48%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
++S + N Y +I+ GK + AE + M G D +T T ++ Y KAG +
Sbjct: 192 DQSVQPNSATYNTLINACGKGGLYEKAEELVDLMVEHGVQPDHITYTALIDAYGKAGLWE 251
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
AE TF+ +K +D +Y +M+ AY R G+ + E + + M + Y +L+
Sbjct: 252 NAENTFKGMKGTNVSVDVMAYTAMIDAYGREGLYQKAEEMFKMMQHSGLRPNQVTYLSLM 311
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
Y G E ++ VF ++ +G + + + LI+AY AG +A MR+AG +
Sbjct: 312 EAYGKAGLPEESRNVFNIMRESGYEGNVLIYSSLIDAYGKAGNYLEAARMLDMMRRAGCQ 371
Query: 343 PSDKCVALILSACEKEN 359
P+ + ILS+C K N
Sbjct: 372 PNLITYSAILSSCCKSN 388
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 2/160 (1%)
Query: 152 LYLQVAELA--LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLT 209
LY + EL ++E + + YT +I YGK +NAENT MK D + T
Sbjct: 214 LYEKAEELVDLMVEHGVQPDHITYTALIDAYGKAGLWENAENTFKGMKGTNVSVDVMAYT 273
Query: 210 VMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQ 269
M+ Y + G + AEE F+ ++ G ++ +Y S++ AY +AG+ + + M
Sbjct: 274 AMIDAYGREGLYQKAEEMFKMMQHSGLRPNQVTYLSLMEAYGKAGLPEESRNVFNIMRES 333
Query: 270 EVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPD 309
+Y +L+ Y GN A R+ + ++ AG P+
Sbjct: 334 GYEGNVLIYSSLIDAYGKAGNYLEAARMLDMMRRAGCQPN 373
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 92/218 (42%), Gaps = 4/218 (1%)
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKR----RGFICDQVTLTVMVVMYSK 217
LE E N+ Y +I K+ + L M+ + + T ++ K
Sbjct: 152 LEHGCEPNVITYNVLIDALCKEGLLDIGMKVLQYMRDGNTDQSVQPNSATYNTLINACGK 211
Query: 218 AGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
G + AEE + + G D +Y +++ AY +AG+ + E + M V V
Sbjct: 212 GGLYEKAEELVDLMVEHGVQPDHITYTALIDAYGKAGLWENAENTFKGMKGTNVSVDVMA 271
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y A++ Y G + A+ +F+ +Q +G+ P+ L+ AY AG +++ F MR
Sbjct: 272 YTAMIDAYGREGLYQKAEEMFKMMQHSGLRPNQVTYLSLMEAYGKAGLPEESRNVFNIMR 331
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
++G E + + ++ A K A L + R G
Sbjct: 332 ESGYEGNVLIYSSLIDAYGKAGNYLEAARMLDMMRRAG 369
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 107/263 (40%), Gaps = 16/263 (6%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFI-C--DQVTLTVMVVMYSK 217
+L E +A+ YT +++ YGK + A MK C + VT ++ K
Sbjct: 72 MLLEKCQADQYTYTALVNAYGKAKMFEEALAVFSHMKESNEPNCQPNTVTCNALIDALVK 131
Query: 218 AGNLKMAEETFEEIKLLGEPLDKR------SYGSMVMAYVRAGMLDRGEVLLREM----D 267
G A + F +++ L+ +Y ++ A + G+LD G +L+ M
Sbjct: 132 GGLYDQAIQVFFDMRDGTNGLEHGCEPNVITYNVLIDALCKEGLLDIGMKVLQYMRDGNT 191
Query: 268 AQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQ 327
Q V S Y L+ G E A+ + + + G+ PD LI+AY AG +
Sbjct: 192 DQSVQPNSATYNTLINACGKGGLYEKAEELVDLMVEHGVQPDHITYTALIDAYGKAGLWE 251
Query: 328 KAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLA 387
A F+ M+ + ++ A +E +A E ++ G + +L
Sbjct: 252 NAENTFKGMKGTNVSVDVMAYTAMIDAYGREGLYQKAEEMFKMMQHSGLRPNQVTYLSLM 311
Query: 388 AWFKRLGVVEE---VEHVLREYG 407
+ + G+ EE V +++RE G
Sbjct: 312 EAYGKAGLPEESRNVFNIMRESG 334
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 112/241 (46%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++R Y+ +IHG K Q + N AMK++GF D +V + K+G + A
Sbjct: 559 FLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAY 618
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
E EE+K +YG++V + LD +L E ++ + + +Y +L+ G+
Sbjct: 619 EILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGF 678
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
G + A + E + G+TP+ L++A A + +A FQ+M++ P+
Sbjct: 679 GKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNT 738
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+++++ + + N+A F D+++ G + T+ + ++G + + +
Sbjct: 739 YTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFER 798
Query: 406 Y 406
+
Sbjct: 799 F 799
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 102/245 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++++ E N Y II +++ A L M+ + +T+ +MV KA
Sbjct: 379 VMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARK 438
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ A + FE G D +Y S++ + G +D L +M VY +
Sbjct: 439 LEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTS 498
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+R + ++G E ++F+ + G PD + ++ AG+ +K F+++R G
Sbjct: 499 LIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYG 558
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
P + ++++ K Q +++ GF + A + F + G V +
Sbjct: 559 FLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAY 618
Query: 401 HVLRE 405
+L E
Sbjct: 619 EILEE 623
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 108/259 (41%), Gaps = 19/259 (7%)
Query: 115 PETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYT 174
P + L+ A +P RA L +L+Q++ E +E + +T
Sbjct: 177 PAFSAYTVLIGALAEARRPERA--LELLRQMQ----------------EVGYEVGVHLFT 218
Query: 175 KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLL 234
++ ++ Q+ +A + +K D V V + + KAGN+ MA + F E+K
Sbjct: 219 TLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQ 278
Query: 235 GEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGA 294
G D SY SM+ +AG L E L +M+A+ + Y ++ GY G E A
Sbjct: 279 GLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDA 338
Query: 295 QRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSA 354
++ E ++ G P ++ + +A + F+ M+K EP+ +I+
Sbjct: 339 YKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYNIIIDM 397
Query: 355 CEKENQLNRALEFLIDLER 373
++ A L ++E
Sbjct: 398 LCLGGRVEEAYRILDEMEH 416
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
++ GF+ D + ++++ +KAG + F +K G LD R+Y ++V + ++G
Sbjct: 554 IRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGK 613
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
+ + +L EM + V Y A++ G + + A +FE + GI + + +
Sbjct: 614 VHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSS 673
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
LI+ + G+ +AY + M K GL P+ +L A K ++N AL
Sbjct: 674 LIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEAL 723
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 99/233 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G GKK Q+ A M G + V T ++ + G + + F+E+
Sbjct: 461 YCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELI 520
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D + + +AG +++G ++ ++ + Y L+ G + G +
Sbjct: 521 RRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQAR 580
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
+F A++ G DAR +++ + +G+ KAY + M++ ++P+ I+
Sbjct: 581 ETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIV 640
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
K ++L+ A + + G + +L F ++G ++E +L E
Sbjct: 641 DGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEE 693
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 88/208 (42%), Gaps = 4/208 (1%)
Query: 161 LLEES----FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS 216
L EE+ E N+ Y+ +I G+GK +I A L M ++G + T ++
Sbjct: 655 LFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALV 714
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
KA + A F+ +K + P + +Y ++ R ++ V ++M Q +
Sbjct: 715 KAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVV 774
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
Y ++ G + GN A +FE + G PDA LI A ++ +AY F+
Sbjct: 775 TYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEET 834
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRA 364
R G + K +L A K L +A
Sbjct: 835 RLRGCRINIKSCISLLDALNKSECLEQA 862
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/216 (19%), Positives = 87/216 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L+ AN YT +I + + ++ + RRG D L + KAG
Sbjct: 484 MLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGE 543
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ FE+I+ G D RSY ++ +AG + M Q + + Y A
Sbjct: 544 VEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNA 603
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G+ +G A + E ++ + P +++ + +AY F+ + G
Sbjct: 604 VVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKG 663
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+E + + ++ K +++ A L ++ + G
Sbjct: 664 IELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGL 699
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 69/168 (41%), Gaps = 1/168 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I GYG + ++A L ++ RG I V+ ++ K + A FE +K
Sbjct: 322 YNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK 381
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
EP + +Y ++ G ++ +L EM+ ++ ++ E
Sbjct: 382 KDAEP-NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLE 440
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
A ++FE+ G PD LI+ GQ +AY F+ M AG
Sbjct: 441 EAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAG 488
>gi|326528911|dbj|BAJ97477.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 913
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 110/226 (48%), Gaps = 1/226 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +IHG +K Q++ A + L M G ++ T T+++ Y+ G++ A E F +IK
Sbjct: 595 YNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAATGDIAKAFEYFTKIK 654
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G LD Y +++ A ++G + + REM +Q++ + VY L+ G++ G+
Sbjct: 655 EGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKIARNTFVYNILIDGWARRGDVW 714
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + ++ G+ P+ INA AG Q+A T M GL+P+ K ++
Sbjct: 715 EAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQTVIDEMSDVGLKPNLKTYTTLI 774
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEA-SCTLAAWFKRLGVVE 397
+ + +RAL+ +++ G + A C + + R V+E
Sbjct: 775 KGWARASLPDRALKCFEEMKLAGLKPDEAAYHCLVTSLLSRATVME 820
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/327 (19%), Positives = 144/327 (44%), Gaps = 8/327 (2%)
Query: 77 WIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRFMKPRRA 136
W+ G + K+A S + + C+ F ++++ PE + +++A+ R KP R
Sbjct: 227 WVDHG-----QGKEAPSPWHHGRDEACREF-RRVVESRPE--DWQAVVSAFERIPKPSRR 278
Query: 137 DWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAM 196
++ ++ + + + E N +T ++H Y ++ A + M
Sbjct: 279 EFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCTEEM 338
Query: 197 KRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGML 256
K G VT ++++ + K + + A+ F+E K L+ Y +++ A+ ++G +
Sbjct: 339 KAEGIELTIVTYSILISGFGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHCQSGNM 398
Query: 257 DRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALL 316
DR E L+ EM+ + + Y +++ GY++ + + VFE ++ TP L
Sbjct: 399 DRAEELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCL 458
Query: 317 INAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
IN Y G+ KA + M +G++ ++K ++++S + A ++ + G
Sbjct: 459 INLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSGL 518
Query: 377 MVGKEASCTLAAWFKRLGVVEEVEHVL 403
+ L F ++G ++ +L
Sbjct: 519 QPDRAIYNLLIEAFCKMGNMDRAIRIL 545
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 105/247 (42%), Gaps = 35/247 (14%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
E E I Y+ +I G+GK Q+A+N K + + + ++ + ++GN+
Sbjct: 341 EGIELTIVTYSILISGFGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHCQSGNMDR 400
Query: 224 AEETFEEIKLLG--EPLDKR---------------------------------SYGSMVM 248
AEE E++ G P+D SYG ++
Sbjct: 401 AEELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLIN 460
Query: 249 AYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITP 308
YV+ G + + + +EM++ + ++ Y L+ G+ + A R+FE + +G+ P
Sbjct: 461 LYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSGLQP 520
Query: 309 DARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFL 368
D + LLI A+ G +A + M+K ++PS++ I+ + RAL+ L
Sbjct: 521 DRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALDIL 580
Query: 369 IDLERDG 375
+ R G
Sbjct: 581 DLMRRSG 587
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/216 (19%), Positives = 95/216 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E F +I Y +I+ Y K ++ A M+ G + T ++++ + +
Sbjct: 443 LKECCFTPSIISYGCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHD 502
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A FEE+ G D+ Y ++ A+ + G +DR +L +M + + + ++
Sbjct: 503 FTNAFRIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRP 562
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G+++ G+ + A + + ++ +G P LI+ Q ++A + M AG
Sbjct: 563 IIEGFAVAGDMKRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAG 622
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+ P++ +I+ + +A E+ ++ G
Sbjct: 623 ITPNEHTYTIIMRGYAATGDIAKAFEYFTKIKEGGL 658
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 79/169 (46%), Gaps = 5/169 (2%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E + ++ Y ++ K ++Q+A M + + +++ +++ G++
Sbjct: 655 EGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKIARNTFVYNILIDGWARRGDVW 714
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A + +++K G P + +Y S + A +AG + R + ++ EM + + Y L+
Sbjct: 715 EAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQTVIDEMSDVGLKPNLKTYTTLI 774
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPD--ARMC---ALLINAYQMAGQS 326
+G++ + A + FE ++ AG+ PD A C +LL A M G +
Sbjct: 775 KGWARASLPDRALKCFEEMKLAGLKPDEAAYHCLVTSLLSRATVMEGST 823
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
NI Y I+HGY +++ A+ L MKR+ D T ++ K G L+ A + F
Sbjct: 255 NIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIF 314
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
EE+ G Y +++ + G LD EM + + Y +L+ M
Sbjct: 315 EEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFME 374
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
++ A+ + + IQ GI+PDA +LIN Y ++KA+ M +G++P+ K
Sbjct: 375 QRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTY 434
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFM 377
+L K+N++ A + + +G +
Sbjct: 435 TSLLHVLSKKNRMKEADDLFKKITSEGVL 463
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/216 (18%), Positives = 94/216 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L++ + Y +IH + + AE + ++ +G D +T +++ Y + N
Sbjct: 352 MLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCAN 411
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
K A +E+ G K++Y S++ + + + L +++ ++ V ++ A
Sbjct: 412 AKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNA 471
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G+ N N +GA + + + + PD ++ + G+ ++A F M++ G
Sbjct: 472 LIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRG 531
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
++P ++S + + A ++ GF
Sbjct: 532 IKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGF 567
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 100/247 (40%), Gaps = 2/247 (0%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ E + Y +I G K+ +++ A M ++G V ++ + GNL M
Sbjct: 285 QKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDM 344
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A +E+ G +Y S++ A D E +++E+ + + + Y L+
Sbjct: 345 ASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILIN 404
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
GY N++ A + + + +GI P + L++ + ++A F+ + G+ P
Sbjct: 405 GYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLP 464
Query: 344 SDKCV-ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
ALI C N + A E L D++R + T+ R G VEE +
Sbjct: 465 DVIMFNALIDGHCSNSN-VKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEAREL 523
Query: 403 LREYGLR 409
E R
Sbjct: 524 FDEMKRR 530
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 64/138 (46%)
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
T +M+ + K G LK A++ ++ G + +Y ++V Y +G ++ + +L M
Sbjct: 223 TFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTM 282
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
Q++ S Y +L+ G G E A ++FE + G+ P A + LI+ + G
Sbjct: 283 KRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNL 342
Query: 327 QKAYTAFQNMRKAGLEPS 344
A M K G+ P+
Sbjct: 343 DMASAYKDEMLKKGISPT 360
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/199 (19%), Positives = 81/199 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + + YT ++H KK +++ A++ + G + D + ++ + N
Sbjct: 422 MLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSN 481
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+K A E +++ + P D+ ++ +++ + R G ++ L EM + + +
Sbjct: 482 VKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNT 541
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ GYS G+ + A RV + G P L+ + A + M G
Sbjct: 542 LISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKG 601
Query: 341 LEPSDKCVALILSACEKEN 359
+ P D ++ K N
Sbjct: 602 MTPDDTTYFTLIEGIAKVN 620
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 67/166 (40%), Gaps = 1/166 (0%)
Query: 195 AMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG 254
MK +G + T ++ ++ K + A + E+ L ++ M+ + G
Sbjct: 176 TMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEG 235
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
L + + + M+ V Y ++ GY +G E A + ++ I PD+
Sbjct: 236 KLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYG 295
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV-ALILSACEKEN 359
LI+ G+ ++A F+ M + GL PS LI C K N
Sbjct: 296 SLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGN 341
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 105/239 (43%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
+AN+ Y I GY K++ + L M++ G C+ VT T+++ +S G ++ A+
Sbjct: 257 KANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQR 316
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
FEE++ G D Y S++ R+G + R VL EM + + + Y AL+ G
Sbjct: 317 LFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVC 376
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G E AQ + +Q GI + + LI+ Y +G +A M K GLE
Sbjct: 377 KAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVF 436
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
I S K N+ + A L + G + TL + + G E + V RE
Sbjct: 437 AYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFRE 495
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 95/199 (47%), Gaps = 3/199 (1%)
Query: 147 LMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQV 206
+++ L LQV + ++ E+++ Y I G K + A+ L +M RG + +
Sbjct: 415 MVDEALRLQVV---MEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTM 471
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
+ T ++ +Y K GN A+ F E++ G + +Y ++ Y + G + L E+
Sbjct: 472 SFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDEL 531
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
+ + + +L+ G ++G + A ++F+ + G+ P+ +I+ G+S
Sbjct: 532 ENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRS 591
Query: 327 QKAYTAFQNMRKAGLEPSD 345
++A+ + M++ GL P D
Sbjct: 592 EEAFKLYDEMKETGLTPDD 610
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 109/259 (42%), Gaps = 37/259 (14%)
Query: 156 VAE-LALLE-ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVV 213
VAE L L+E E N+ YT +IHG+ +I+ A+ M+ +G D T ++
Sbjct: 279 VAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIIS 338
Query: 214 MYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYV 273
++GN+K A F+E+ G +YG+++ +AG ++ ++L+ EM + + +
Sbjct: 339 CNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDL 398
Query: 274 GSEVYKALLRGYSMNGNSEGAQRV--------FEAIQFA--------------------- 304
++ L+ GY +G + A R+ E+ FA
Sbjct: 399 NPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLL 458
Query: 305 ------GITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
G++P+ LI+ Y G +A F+ M + G P+ +++ K
Sbjct: 459 FSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKR 518
Query: 359 NQLNRALEFLIDLERDGFM 377
+ A + +LE G +
Sbjct: 519 GNMKEAHKLKDELENRGLI 537
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 80/165 (48%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
+++E N +T +I Y K+ A+ M+ +G + + +T V++ YSK
Sbjct: 459 FSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKR 518
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
GN+K A + +E++ G D + S++ G +D L EM + + Y
Sbjct: 519 GNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTY 578
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
A++ G S +G SE A ++++ ++ G+TPD + + L+ + A
Sbjct: 579 TAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSA 623
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 20/224 (8%)
Query: 193 LLAMKRRG-------FICDQVTLTVMVVMYS---------KAGNLKMAEETFEEIKLLGE 236
LLA++R G F V L V V +YS K G+++M + +E+ G
Sbjct: 197 LLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGV 256
Query: 237 PLDKRSYGSMVMAYVRAGMLDRGEV--LLREMDAQEVYVGSEVYKALLRGYSMNGNSEGA 294
+ +Y + + Y + LD G V +L M+ + V Y L+ G+S G E A
Sbjct: 257 KANVVTYNAFIEGYFKR--LDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEA 314
Query: 295 QRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSA 354
QR+FE ++ GI D + +I+ +G ++A F M GL PS ++
Sbjct: 315 QRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHG 374
Query: 355 CEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
K Q+ A + +++ G + TL + G+V+E
Sbjct: 375 VCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDE 418
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 107/253 (42%), Gaps = 8/253 (3%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +IHG K Q++ A+ + M+ +G + V ++ Y ++G + A ++
Sbjct: 368 YGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVME 427
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y S+ + D + LL M + V + + L+ Y GN
Sbjct: 428 KKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFV 487
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD-KCVALI 351
A+RVF ++ G P+ +LI+ Y G ++A+ + GL P C +LI
Sbjct: 488 EAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLI 547
Query: 352 LSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV---LREYGL 408
C + +++ AL+ ++ + G + + + + G EE + ++E GL
Sbjct: 548 HGEC-IDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGL 606
Query: 409 R---ETYSKIPGS 418
YS + GS
Sbjct: 607 TPDDTVYSSLVGS 619
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/210 (19%), Positives = 86/210 (40%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M+++GF D+ + V ++ + G + F + L + S ++ + G
Sbjct: 181 MEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGD 240
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
++ G L+ E+ A+ V Y A + GY + G + ++ G+ + L
Sbjct: 241 VEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTL 300
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
LI+ + G+ ++A F+ MR+ G+E I+S + + RAL ++ G
Sbjct: 301 LIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKG 360
Query: 376 FMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ L + G +E + ++ E
Sbjct: 361 LIPSAHTYGALIHGVCKAGQMEAAQMLVNE 390
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
NI Y I+HGY +++ A+ L MKR+ D T ++ K G L+ A + F
Sbjct: 255 NIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIF 314
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
EE+ G Y +++ + G LD EM + + Y +L+ M
Sbjct: 315 EEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFME 374
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
++ A+ + + IQ GI+PDA +LIN Y ++KA+ M +G++P+ K
Sbjct: 375 QRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTY 434
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFM 377
+L K+N++ A + + +G +
Sbjct: 435 TSLLHVLSKKNRMKEADDLFKKITSEGVL 463
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/216 (18%), Positives = 95/216 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L++ + Y +IH + + AE + ++ +G D +T +++ Y + N
Sbjct: 352 MLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCAN 411
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
K A +E+ G K++Y S++ + + + L +++ ++ V + ++ A
Sbjct: 412 AKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNA 471
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G+ N N +GA + + + + PD ++ + G+ ++A F M++ G
Sbjct: 472 LIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRG 531
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
++P ++S + + A ++ GF
Sbjct: 532 IKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGF 567
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 100/247 (40%), Gaps = 2/247 (0%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ E + Y +I G K+ +++ A M ++G V ++ + GNL M
Sbjct: 285 QKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDM 344
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A +E+ G +Y S++ A D E +++E+ + + + Y L+
Sbjct: 345 ASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILIN 404
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
GY N++ A + + + +GI P + L++ + ++A F+ + G+ P
Sbjct: 405 GYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLP 464
Query: 344 SDKCV-ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
ALI C N + A E L D++R + T+ R G VEE +
Sbjct: 465 DAIMFNALIDGHCSNSN-VKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEAREL 523
Query: 403 LREYGLR 409
E R
Sbjct: 524 FDEMKRR 530
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/199 (19%), Positives = 81/199 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + + YT ++H KK +++ A++ + G + D + ++ + N
Sbjct: 422 MLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSN 481
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+K A E +++ + P D+ ++ +++ + R G ++ L EM + + +
Sbjct: 482 VKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNT 541
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ GYS G+ + A RV + G P L+ + A + M G
Sbjct: 542 LISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKG 601
Query: 341 LEPSDKCVALILSACEKEN 359
+ P D ++ K N
Sbjct: 602 MTPDDTTYFTLIEGIAKVN 620
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 64/138 (46%)
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
T +M+ + K G LK A++ ++ G + +Y ++V Y +G ++ + +L M
Sbjct: 223 TFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTM 282
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
Q++ S Y +L+ G G E A ++FE + G+ P A + LI+ + G
Sbjct: 283 KRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNL 342
Query: 327 QKAYTAFQNMRKAGLEPS 344
A M K G+ P+
Sbjct: 343 DMASAYKDEMLKKGISPT 360
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 67/166 (40%), Gaps = 1/166 (0%)
Query: 195 AMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG 254
MK +G + T ++ ++ K + A + E+ L ++ M+ + G
Sbjct: 176 TMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEG 235
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
L + + + M+ V Y ++ GY +G E A + ++ I PD+
Sbjct: 236 KLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYG 295
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV-ALILSACEKEN 359
LI+ G+ ++A F+ M + GL PS LI C K N
Sbjct: 296 SLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGN 341
>gi|297725255|ref|NP_001174991.1| Os06g0710800 [Oryza sativa Japonica Group]
gi|53792631|dbj|BAD53645.1| putative crp1 protein [Oryza sativa Japonica Group]
gi|215693375|dbj|BAG88757.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677390|dbj|BAH93719.1| Os06g0710800 [Oryza sativa Japonica Group]
Length = 492
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 130/277 (46%), Gaps = 6/277 (2%)
Query: 131 MKPRRADWLAVLKQLKLMEHPLYLQVAELALL---EESFEANIRDYTKIIHGYGKKMQIQ 187
++P A + A+L+ L H L++A+ LL ++ N R Y +++ Y + +++
Sbjct: 117 LRPDAAHYNALLEGLLSTAH---LRLADRLLLQMADDGVARNRRTYMLLLNAYARAGRLE 173
Query: 188 NAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMV 247
++ L MKRRG D + +V +Y G K A + E++ LG LD + Y ++
Sbjct: 174 DSWWVLGEMKRRGIRLDTAGYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLI 233
Query: 248 MAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGIT 307
+ + G L + +M A+ V + +L+R + GN++ A R F A+Q G+
Sbjct: 234 DTFGKYGQLADARKVFDKMCAEGVKPDITTWNSLIRWHCRVGNTKRALRFFAAMQEEGMY 293
Query: 308 PDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
PD ++ +I+ G+ + F MR GL+ S A+++ + A +
Sbjct: 294 PDPKIFVTIISRLGEQGKWDEIKKLFHGMRNRGLKESGAVYAVLVDIYGQYGHFRDAHDC 353
Query: 368 LIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
+ L+ + + C LA + + G+ E+ +VL+
Sbjct: 354 VAALKAENLQLSPSIFCVLANAYAQQGLCEQTVNVLQ 390
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 103/234 (44%), Gaps = 3/234 (1%)
Query: 120 LSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHG 179
L+D+ AA +R P A + +++ L L + L + + Y ++ G
Sbjct: 74 LADMQAAGLR---PSGAAYARLIRALARAGRTLEAEALLLEMRRLGLRPDAAHYNALLEG 130
Query: 180 YGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLD 239
++ A+ LL M G ++ T +++ Y++AG L+ + E+K G LD
Sbjct: 131 LLSTAHLRLADRLLLQMADDGVARNRRTYMLLLNAYARAGRLEDSWWVLGEMKRRGIRLD 190
Query: 240 KRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFE 299
Y ++V Y GM + L+ EM V + ++Y L+ + G A++VF+
Sbjct: 191 TAGYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADARKVFD 250
Query: 300 AIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILS 353
+ G+ PD LI + G +++A F M++ G+ P K I+S
Sbjct: 251 KMCAEGVKPDITTWNSLIRWHCRVGNTKRALRFFAAMQEEGMYPDPKIFVTIIS 304
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 95/243 (39%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E E +++ Y +I +GK Q+ +A M G D T ++ + + GN K
Sbjct: 219 ELGVELDVKIYNGLIDTFGKYGQLADARKVFDKMCAEGVKPDITTWNSLIRWHCRVGNTK 278
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A F ++ G D + + +++ G D + L M + + VY L+
Sbjct: 279 RALRFFAAMQEEGMYPDPKIFVTIISRLGEQGKWDEIKKLFHGMRNRGLKESGAVYAVLV 338
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
Y G+ A A++ + + +L NAY G ++ Q M G+E
Sbjct: 339 DIYGQYGHFRDAHDCVAALKAENLQLSPSIFCVLANAYAQQGLCEQTVNVLQLMEAEGIE 398
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + L+++A + AL L ++ G TL F R E+V V
Sbjct: 399 PNLVMLNLLINAFGTAGRHLEALAVLQHIKDSGMSPDVVTYTTLMKAFMRAKKFEKVSEV 458
Query: 403 LRE 405
+E
Sbjct: 459 YKE 461
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 80/188 (42%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
A+ EE + + + II G++ + + M+ RG V+V +Y + G
Sbjct: 286 AMQEEGMYPDPKIFVTIISRLGEQGKWDEIKKLFHGMRNRGLKESGAVYAVLVDIYGQYG 345
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ + A + +K L + + AY + G+ ++ +L+ M+A+ + +
Sbjct: 346 HFRDAHDCVAALKAENLQLSPSIFCVLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLN 405
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ + G A V + I+ +G++PD L+ A+ A + +K ++ M A
Sbjct: 406 LLINAFGTAGRHLEALAVLQHIKDSGMSPDVVTYTTLMKAFMRAKKFEKVSEVYKEMEGA 465
Query: 340 GLEPSDKC 347
G P K
Sbjct: 466 GCTPDRKA 473
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 67/162 (41%)
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI 301
+Y ++ A RAG E LL EM + + Y ALL G + A R+ +
Sbjct: 88 AYARLIRALARAGRTLEAEALLLEMRRLGLRPDAAHYNALLEGLLSTAHLRLADRLLLQM 147
Query: 302 QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQL 361
G+ + R LL+NAY AG+ + ++ M++ G+ + ++
Sbjct: 148 ADDGVARNRRTYMLLLNAYARAGRLEDSWWVLGEMKRRGIRLDTAGYSTLVRLYRDNGMW 207
Query: 362 NRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+A + +++++ G + + L F + G + + V
Sbjct: 208 KKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADARKVF 249
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 50/125 (40%), Gaps = 2/125 (1%)
Query: 283 RGYSMNGNSEGAQ--RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
RG + S+ A R+ +Q AG+ P A LI A AG++ +A MR+ G
Sbjct: 57 RGIQHHAGSDLASSLRLLADMQAAGLRPSGAAYARLIRALARAGRTLEAEALLLEMRRLG 116
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
L P +L L A L+ + DG + L + R G +E+
Sbjct: 117 LRPDAAHYNALLEGLLSTAHLRLADRLLLQMADDGVARNRRTYMLLLNAYARAGRLEDSW 176
Query: 401 HVLRE 405
VL E
Sbjct: 177 WVLGE 181
>gi|225423724|ref|XP_002276864.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Vitis vinifera]
Length = 587
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y I G K Q A MKR T T+++ +Y KA MA + F E++
Sbjct: 241 YNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMR 300
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ ++ ++V A+ R G+ ++ E + ++ + Y AL+ YS G
Sbjct: 301 SQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPY 360
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
GA +F +Q G PD ++++AY AG + A F+ M++ G+ P+ K L+L
Sbjct: 361 GAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLL 420
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
SA + ++ + E + + + G ++ + RLG E++E VL
Sbjct: 421 SAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVL 471
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 101/232 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I+ YGK + A M+ + + T T +V +++ G + AEE FE+++
Sbjct: 276 YTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQ 335
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +++ AY RAG + M Y ++ Y G E
Sbjct: 336 EAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHE 395
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
AQ VFE ++ GITP + LL++AY AG+ K M K+G++P + +L
Sbjct: 396 DAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSML 455
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
+ + Q + E L +E+ + L + R G +E + R
Sbjct: 456 NLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFR 507
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 112/277 (40%), Gaps = 4/277 (1%)
Query: 131 MKPRRADW---LAVLKQLKLMEH-PLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQI 186
+ P W + V QL+L + + + L SF ++ Y +I YG+K
Sbjct: 125 LSPNHTTWDDIINVAVQLRLNKQWDAIVLICGWILYRSSFHPDVICYNLLIDAYGQKSLY 184
Query: 187 QNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSM 246
+ AE+T L + + + T +++ Y +G L+ AE F E++ G P Y +
Sbjct: 185 KKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAY 244
Query: 247 VMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGI 306
+ ++ G + + M + Y L+ Y S A +VF ++
Sbjct: 245 IDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKC 304
Query: 307 TPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALE 366
P+ L+NA+ G +KA F+ +++AGLEP ++ A + A E
Sbjct: 305 KPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAE 364
Query: 367 FLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
++ G + + + + R G+ E+ + V
Sbjct: 365 IFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVF 401
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 82/208 (39%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E + Y ++ YG+ ++A+ MKR G + +++ YS+AG + EE
Sbjct: 375 EPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEE 434
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
++ G D SM+ Y R G ++ E +L M+ Y L+ Y
Sbjct: 435 IVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYG 494
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G + +F ++ + PD I AY Q + F+ M AG P
Sbjct: 495 RAGFFARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGG 554
Query: 347 CVALILSACEKENQLNRALEFLIDLERD 374
++LSAC +Q+ + + +D
Sbjct: 555 TAKVLLSACSNGDQIQEVTTVIRTMHKD 582
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 103/245 (42%), Gaps = 2/245 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E E ++ Y ++ Y + A M+ G D+ + +MV Y +AG
Sbjct: 334 LQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGL 393
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A+ FE +K LG +S+ ++ AY RAG + + E ++ +M + + V +
Sbjct: 394 HEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNS 453
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+L Y G E + V A++ D +LIN Y AG + F+++
Sbjct: 454 MLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARN 513
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDG-FMVGKEASCTLAAWFKRLGVVEEV 399
L P + A + Q NR LE ++ G + G A L+A ++EV
Sbjct: 514 LIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLSAC-SNGDQIQEV 572
Query: 400 EHVLR 404
V+R
Sbjct: 573 TTVIR 577
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 105/239 (43%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
+AN+ Y I GY K++ + L M++ G C+ VT T+++ +S G ++ A+
Sbjct: 261 KANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQR 320
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
FEE++ G D Y S++ R+G + R VL EM + + + Y AL+ G
Sbjct: 321 LFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVC 380
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G E AQ + +Q GI + + LI+ Y +G +A M K GLE
Sbjct: 381 KAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVF 440
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
I S K N+ + A L + G + TL + + G E + V RE
Sbjct: 441 AYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFRE 499
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 95/199 (47%), Gaps = 3/199 (1%)
Query: 147 LMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQV 206
+++ L LQV + ++ E+++ Y I G K + A+ L +M RG + +
Sbjct: 419 MVDEALRLQVV---MEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTM 475
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
+ T ++ +Y K GN A+ F E++ G + +Y ++ Y + G + L E+
Sbjct: 476 SFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDEL 535
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
+ + + +L+ G ++G + A ++F+ + G+ P+ +I+ G+S
Sbjct: 536 ENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRS 595
Query: 327 QKAYTAFQNMRKAGLEPSD 345
++A+ + M++ GL P D
Sbjct: 596 EEAFKLYDEMKETGLTPDD 614
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 109/259 (42%), Gaps = 37/259 (14%)
Query: 156 VAE-LALLE-ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVV 213
VAE L L+E E N+ YT +IHG+ +I+ A+ M+ +G D T ++
Sbjct: 283 VAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIIS 342
Query: 214 MYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYV 273
++GN+K A F+E+ G +YG+++ +AG ++ ++L+ EM + + +
Sbjct: 343 CNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDL 402
Query: 274 GSEVYKALLRGYSMNGNSEGAQRV--------FEAIQFA--------------------- 304
++ L+ GY +G + A R+ E+ FA
Sbjct: 403 NPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLL 462
Query: 305 ------GITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
G++P+ LI+ Y G +A F+ M + G P+ +++ K
Sbjct: 463 FSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKR 522
Query: 359 NQLNRALEFLIDLERDGFM 377
+ A + +LE G +
Sbjct: 523 GNMKEAHKLKDELENRGLI 541
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 82/168 (48%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
+++E N +T +I Y K+ A+ M+ +G + + +T V++ YSK
Sbjct: 463 FSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKR 522
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
GN+K A + +E++ G D + S++ G +D L EM + + Y
Sbjct: 523 GNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTY 582
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
A++ G S +G SE A ++++ ++ G+TPD + + L+ + A +S
Sbjct: 583 TAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSADES 630
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 20/224 (8%)
Query: 193 LLAMKRRG-------FICDQVTLTVMVVMYS---------KAGNLKMAEETFEEIKLLGE 236
LLA++R G F V L V V +YS K G+++M + +E+ G
Sbjct: 201 LLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGV 260
Query: 237 PLDKRSYGSMVMAYVRAGMLDRGEV--LLREMDAQEVYVGSEVYKALLRGYSMNGNSEGA 294
+ +Y + + Y + LD G V +L M+ + V Y L+ G+S G E A
Sbjct: 261 KANVVTYNAFIEGYFKR--LDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEA 318
Query: 295 QRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSA 354
QR+FE ++ GI D + +I+ +G ++A F M GL PS ++
Sbjct: 319 QRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHG 378
Query: 355 CEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
K Q+ A + +++ G + TL + G+V+E
Sbjct: 379 VCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDE 422
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 107/253 (42%), Gaps = 8/253 (3%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +IHG K Q++ A+ + M+ +G + V ++ Y ++G + A ++
Sbjct: 372 YGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVME 431
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y S+ + D + LL M + V + + L+ Y GN
Sbjct: 432 KKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFV 491
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD-KCVALI 351
A+RVF ++ G P+ +LI+ Y G ++A+ + GL P C +LI
Sbjct: 492 EAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLI 551
Query: 352 LSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV---LREYGL 408
C + +++ AL+ ++ + G + + + + G EE + ++E GL
Sbjct: 552 HGEC-IDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGL 610
Query: 409 R---ETYSKIPGS 418
YS + GS
Sbjct: 611 TPDDTVYSSLVGS 623
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/210 (19%), Positives = 86/210 (40%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M+++GF D+ + V ++ + G + F + L + S ++ + G
Sbjct: 185 MEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGD 244
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
++ G L+ E+ A+ V Y A + GY + G + ++ G+ + L
Sbjct: 245 VEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTL 304
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
LI+ + G+ ++A F+ MR+ G+E I+S + + RAL ++ G
Sbjct: 305 LIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKG 364
Query: 376 FMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ L + G +E + ++ E
Sbjct: 365 LIPSAHTYGALIHGVCKAGQMEAAQMLVNE 394
>gi|297737955|emb|CBI27156.3| unnamed protein product [Vitis vinifera]
Length = 625
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y I G K Q A MKR T T+++ +Y KA MA + F E++
Sbjct: 279 YNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMR 338
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ ++ ++V A+ R G+ ++ E + ++ + Y AL+ YS G
Sbjct: 339 SQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPY 398
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
GA +F +Q G PD ++++AY AG + A F+ M++ G+ P+ K L+L
Sbjct: 399 GAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLL 458
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
SA + ++ + E + + + G ++ + RLG E++E VL
Sbjct: 459 SAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVL 509
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 101/232 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I+ YGK + A M+ + + T T +V +++ G + AEE FE+++
Sbjct: 314 YTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQ 373
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +++ AY RAG + M Y ++ Y G E
Sbjct: 374 EAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHE 433
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
AQ VFE ++ GITP + LL++AY AG+ K M K+G++P + +L
Sbjct: 434 DAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSML 493
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
+ + Q + E L +E+ + L + R G +E + R
Sbjct: 494 NLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFR 545
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 112/277 (40%), Gaps = 4/277 (1%)
Query: 131 MKPRRADW---LAVLKQLKLMEH-PLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQI 186
+ P W + V QL+L + + + L SF ++ Y +I YG+K
Sbjct: 163 LSPNHTTWDDIINVAVQLRLNKQWDAIVLICGWILYRSSFHPDVICYNLLIDAYGQKSLY 222
Query: 187 QNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSM 246
+ AE+T L + + + T +++ Y +G L+ AE F E++ G P Y +
Sbjct: 223 KKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAY 282
Query: 247 VMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGI 306
+ ++ G + + M + Y L+ Y S A +VF ++
Sbjct: 283 IDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKC 342
Query: 307 TPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALE 366
P+ L+NA+ G +KA F+ +++AGLEP ++ A + A E
Sbjct: 343 KPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAE 402
Query: 367 FLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
++ G + + + + R G+ E+ + V
Sbjct: 403 IFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVF 439
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 82/208 (39%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E + Y ++ YG+ ++A+ MKR G + +++ YS+AG + EE
Sbjct: 413 EPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEE 472
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
++ G D SM+ Y R G ++ E +L M+ Y L+ Y
Sbjct: 473 IVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYG 532
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G + +F ++ + PD I AY Q + F+ M AG P
Sbjct: 533 RAGFFARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGG 592
Query: 347 CVALILSACEKENQLNRALEFLIDLERD 374
++LSAC +Q+ + + +D
Sbjct: 593 TAKVLLSACSNGDQIQEVTTVIRTMHKD 620
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 103/245 (42%), Gaps = 2/245 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E E ++ Y ++ Y + A M+ G D+ + +MV Y +AG
Sbjct: 372 LQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGL 431
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A+ FE +K LG +S+ ++ AY RAG + + E ++ +M + + V +
Sbjct: 432 HEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNS 491
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+L Y G E + V A++ D +LIN Y AG + F+++
Sbjct: 492 MLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARN 551
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDG-FMVGKEASCTLAAWFKRLGVVEEV 399
L P + A + Q NR LE ++ G + G A L+A ++EV
Sbjct: 552 LIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLSAC-SNGDQIQEV 610
Query: 400 EHVLR 404
V+R
Sbjct: 611 TTVIR 615
>gi|168023641|ref|XP_001764346.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684498|gb|EDQ70900.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 978
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 111/245 (45%), Gaps = 9/245 (3%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
EAN+ + +I G + Q+ A M + D+V ++ ++AG ++ A
Sbjct: 361 IEANVHTFGAMIDGCARAGQLPKAFGAYGIMISKNVKPDRVIFNTLINACTRAGAVQRAF 420
Query: 226 ETFEEIKLLGEPL--DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
+ ++K P+ D +YG+++ A RAG +DR + + M V Y A++
Sbjct: 421 DVLTDMKAEATPIKPDHVTYGALISACARAGEVDRALEVYQNMRESNVKGSPACYTAVVH 480
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
S GN + A V++ ++ G+ PD + L++A A +KA++ NM+K GL+P
Sbjct: 481 ACSQKGNVDYALLVYDDLKKDGVKPDEVFFSALVDAAGHAQDIEKAFSIIANMKKEGLKP 540
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDG-------FMVGKEASCTLAAWFKRLGVV 396
+ ++ C +ALE D+ G F A C + + L ++
Sbjct: 541 GAVVYSSLMGVCSNLGNWEKALEVYQDIRSSGLQPTVSTFNALMTALCEANQFTRALSIL 600
Query: 397 EEVEH 401
++V++
Sbjct: 601 QDVKN 605
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 94/204 (46%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I + ++ A M+ T +V S+ GN+ A ++++K
Sbjct: 440 YGALISACARAGEVDRALEVYQNMRESNVKGSPACYTAVVHACSQKGNVDYALLVYDDLK 499
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D+ + ++V A A +++ ++ M + + G+ VY +L+ S GN E
Sbjct: 500 KDGVKPDEVFFSALVDAAGHAQDIEKAFSIIANMKKEGLKPGAVVYSSLMGVCSNLGNWE 559
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A V++ I+ +G+ P L+ A A Q +A + Q+++ +G+ P+ +++L
Sbjct: 560 KALEVYQDIRSSGLQPTVSTFNALMTALCEANQFTRALSILQDVKNSGIMPNQISYSILL 619
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
ACEKE + AL+ + +G
Sbjct: 620 RACEKEKMADMALDLYMTALSEGI 643
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 108/265 (40%), Gaps = 14/265 (5%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
L LL E NI+ Y + K +I++ L M + G L M V +SK
Sbjct: 216 LELLPLKLETNIKFYIDVYASMLKAGRIKDCLKLLGEMDKAG------KLARMKVNHSKF 269
Query: 219 GNLKMA----EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
A E+ F KL+ E + Y ++ A +D +L ++++ +
Sbjct: 270 YEACKARGSVEDAFAFAKLMREFSTLQHYTMLLSVCCHAKDIDGALRVLALLESRGLKAD 329
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
Y +L+ + G + ++F ++ AGI + +I+ AGQ KA+ A+
Sbjct: 330 CMFYTSLISACAKAGKVDLLFQIFHEMEVAGIEANVHTFGAMIDGCARAGQLPKAFGAYG 389
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
M ++P +++AC + + RA + L D++ + + K T A
Sbjct: 390 IMISKNVKPDRVIFNTLINACTRAGAVQRAFDVLTDMKAEATPI-KPDHVTYGALISACA 448
Query: 395 VVEEVEHVLREY-GLRETYSKIPGS 418
EV+ L Y +RE S + GS
Sbjct: 449 RAGEVDRALEVYQNMRE--SNVKGS 471
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 27/141 (19%), Positives = 60/141 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
++ ++ G I+ A + + MK+ G V + ++ + S GN + A E +++I+
Sbjct: 510 FSALVDAAGHAQDIEKAFSIIANMKKEGLKPGAVVYSSLMGVCSNLGNWEKALEVYQDIR 569
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G ++ +++ A A R +L+++ + Y LLR ++
Sbjct: 570 SSGLQPTVSTFNALMTALCEANQFTRALSILQDVKNSGIMPNQISYSILLRACEKEKMAD 629
Query: 293 GAQRVFEAIQFAGITPDARMC 313
A ++ GI P+ +C
Sbjct: 630 MALDLYMTALSEGIKPNVGIC 650
>gi|147779268|emb|CAN70089.1| hypothetical protein VITISV_038171 [Vitis vinifera]
Length = 838
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y I G K Q A MKR T T+++ +Y KA MA + F E++
Sbjct: 171 YNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMR 230
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ ++ ++V A+ R G+ ++ E + ++ + Y AL+ YS G
Sbjct: 231 SQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPY 290
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
GA +F +Q G PD ++++AY AG + A F+ M++ G+ P+ K L+L
Sbjct: 291 GAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLL 350
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
SA + ++ + E + + + G ++ + RLG E++E VL
Sbjct: 351 SAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVL 401
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 102/238 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I+ YGK + A M+ + + T T +V +++ G + AEE FE+++
Sbjct: 206 YTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQ 265
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +++ AY RAG + M Y ++ Y G E
Sbjct: 266 EAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHE 325
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
AQ VFE ++ GITP + LL++AY AG+ K M K+G++P + +L
Sbjct: 326 DAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSML 385
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRE 410
+ + Q + E L +E+ + L + R G +E + R R
Sbjct: 386 NLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARN 443
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 117/288 (40%), Gaps = 7/288 (2%)
Query: 131 MKPRRADW---LAVLKQLKLMEH-PLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQI 186
+ P W + V QL+L + + + L SF ++ Y +I YG+K
Sbjct: 55 LSPNHTTWDDIINVAVQLRLNKQWDAIVLICGWILYRSSFHPDVICYNLLIDAYGQKSLY 114
Query: 187 QNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSM 246
+ AE+T L + + + T +++ Y +G L+ AE F E++ G P Y +
Sbjct: 115 KKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAY 174
Query: 247 VMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGI 306
+ ++ G + + M + Y L+ Y S A +VF ++
Sbjct: 175 IDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKC 234
Query: 307 TPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALE 366
P+ L+NA+ G +KA F+ +++AGLEP ++ A + A E
Sbjct: 235 KPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAE 294
Query: 367 FLIDLERDGFMVGKEASCTLAAWFKRLGVVEE---VEHVLREYGLRET 411
++ G + + + + R G+ E+ V V++ G+ T
Sbjct: 295 IFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPT 342
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 87/206 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E E ++ Y ++ Y + A M+ G D+ + +MV Y +AG
Sbjct: 264 LQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGL 323
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A+ FE +K LG +S+ ++ AY RAG + + E ++ +M + + V +
Sbjct: 324 HEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNS 383
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+L Y G E + V A++ D +LIN Y AG + F+++
Sbjct: 384 MLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARN 443
Query: 341 LEPSDKCVALILSACEKENQLNRALE 366
L P + A + Q NR LE
Sbjct: 444 LIPDVVTWTSRIGAYSRRKQYNRCLE 469
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 89/244 (36%), Gaps = 20/244 (8%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E + Y ++ YG+ ++A+ MKR G + +++ YS+AG + EE
Sbjct: 305 EPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEE 364
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
++ G D SM+ Y R G ++ E +L M+ Y L+ Y
Sbjct: 365 IVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYG 424
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G + +F ++ + PD I AY Q + F+ M AG P
Sbjct: 425 RAGFFARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGG 484
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREY 406
+N L + F+ F+VG + + LG +LR
Sbjct: 485 TA---------KNVLLKVAIFMAS-----FLVGSASPSPFSPTAPILG------SILRSL 524
Query: 407 GLRE 410
G RE
Sbjct: 525 GFRE 528
>gi|357123699|ref|XP_003563545.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Brachypodium distachyon]
Length = 492
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 124/274 (45%)
Query: 131 MKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAE 190
++P A + A+L+ L H L + ++ N R Y ++ Y + +++++
Sbjct: 119 LRPDAAHYNALLEGLLARAHLCLADRLLLQMADDGVARNRRTYMLLLDAYARAGRLEDSW 178
Query: 191 NTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAY 250
L MKRRG D + +V +Y G K A + E++ LG LD + Y ++ +
Sbjct: 179 WVLGEMKRRGIQLDTAGYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTF 238
Query: 251 VRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDA 310
+ G L L +M A+ + + AL+R + GN + A R F A+Q G+ PD
Sbjct: 239 GKYGQLADARRLFEKMRAEGIKPDIATWNALIRWHCRVGNMKRALRFFAAMQEEGMYPDP 298
Query: 311 RMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLID 370
++ +I+ G+ + F MR GL+ S A+++ + + A E +
Sbjct: 299 KIFMSIISRLGEQGKWDELKKLFDKMRNRGLKESGAVYAVLVDIYGQYGRFRDAHECVAA 358
Query: 371 LERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
L+ + + C LA + + G+ E+ +VL+
Sbjct: 359 LKAEELHLSPSIFCVLANAYAQQGLCEQTVNVLQ 392
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 103/234 (44%), Gaps = 3/234 (1%)
Query: 120 LSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHG 179
L+D+ AA M+P A + +++ L L + L + + Y ++ G
Sbjct: 76 LADMEAAG---MRPSAAAYARLIRALARAGRTLEAEALLLEMRHLGLRPDAAHYNALLEG 132
Query: 180 YGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLD 239
+ + A+ LL M G ++ T +++ Y++AG L+ + E+K G LD
Sbjct: 133 LLARAHLCLADRLLLQMADDGVARNRRTYMLLLDAYARAGRLEDSWWVLGEMKRRGIQLD 192
Query: 240 KRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFE 299
Y ++V Y GM + L+ EM V + ++Y L+ + G A+R+FE
Sbjct: 193 TAGYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADARRLFE 252
Query: 300 AIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILS 353
++ GI PD LI + G ++A F M++ G+ P K I+S
Sbjct: 253 KMRAEGIKPDIATWNALIRWHCRVGNMKRALRFFAAMQEEGMYPDPKIFMSIIS 306
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 99/248 (39%), Gaps = 35/248 (14%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E E +++ Y +I +GK Q+ +A M+ G D T ++ + + GN+K
Sbjct: 221 ELGVELDVKIYNGLIDTFGKYGQLADARRLFEKMRAEGIKPDIATWNALIRWHCRVGNMK 280
Query: 223 MAEETF----------------------------EEIKLLGEPLDKRS-------YGSMV 247
A F +E+K L + + R Y +V
Sbjct: 281 RALRFFAAMQEEGMYPDPKIFMSIISRLGEQGKWDELKKLFDKMRNRGLKESGAVYAVLV 340
Query: 248 MAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGIT 307
Y + G + + A+E+++ ++ L Y+ G E V + ++ GI
Sbjct: 341 DIYGQYGRFRDAHECVAALKAEELHLSPSIFCVLANAYAQQGLCEQTVNVLQLMEAEGIE 400
Query: 308 PDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
P+ M LLINA+ AG+ +A FQ+++ +G+ P ++ + + + E
Sbjct: 401 PNLVMLNLLINAFSTAGRHLEAVAVFQHIKDSGMSPDVVTYTTLMKGFMRVKKFEKVSEV 460
Query: 368 LIDLERDG 375
++ER G
Sbjct: 461 YNEMERAG 468
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 96/227 (42%), Gaps = 6/227 (2%)
Query: 131 MKPRRADWLAVLK---QLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQ 187
+KP A W A+++ ++ M+ L A + EE + + + II G++ +
Sbjct: 259 IKPDIATWNALIRWHCRVGNMKRALRFFAA---MQEEGMYPDPKIFMSIISRLGEQGKWD 315
Query: 188 NAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMV 247
+ M+ RG V+V +Y + G + A E +K L + +
Sbjct: 316 ELKKLFDKMRNRGLKESGAVYAVLVDIYGQYGRFRDAHECVAALKAEELHLSPSIFCVLA 375
Query: 248 MAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGIT 307
AY + G+ ++ +L+ M+A+ + + L+ +S G A VF+ I+ +G++
Sbjct: 376 NAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFSTAGRHLEAVAVFQHIKDSGMS 435
Query: 308 PDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSA 354
PD L+ + + +K + M +AG P K ++ A
Sbjct: 436 PDVVTYTTLMKGFMRVKKFEKVSEVYNEMERAGCTPDRKAREMLHDA 482
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 59/134 (44%)
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI 301
+Y ++ A RAG E LL EM + + Y ALL G + A R+ +
Sbjct: 90 AYARLIRALARAGRTLEAEALLLEMRHLGLRPDAAHYNALLEGLLARAHLCLADRLLLQM 149
Query: 302 QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQL 361
G+ + R LL++AY AG+ + ++ M++ G++ + ++
Sbjct: 150 ADDGVARNRRTYMLLLDAYARAGRLEDSWWVLGEMKRRGIQLDTAGYSTLVRLYRDNGMW 209
Query: 362 NRALEFLIDLERDG 375
+A + +++++ G
Sbjct: 210 KKATDLIMEMQELG 223
>gi|357166784|ref|XP_003580849.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Brachypodium distachyon]
Length = 904
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 109/226 (48%), Gaps = 1/226 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +IHG KK Q++ A + L M G ++ T T+++ Y+ G++ A E F +IK
Sbjct: 587 YNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAANGDIGKAFEYFTKIK 646
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G LD Y +++ A ++G + + REM Q++ + VY L+ G++ G+
Sbjct: 647 EGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSTQKIARNTFVYNILIDGWARRGDVW 706
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + ++ G+ P+ INA AG Q+A + M GL+P+ K ++
Sbjct: 707 EAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQKVIEEMADVGLKPNLKTYTTLI 766
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEA-SCTLAAWFKRLGVVE 397
K + +RAL+ +++ G + A C + + R V+E
Sbjct: 767 KGWAKASLPDRALKSFEEMKLAGLKPDEAAYHCLVTSLLSRATVME 812
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/327 (19%), Positives = 145/327 (44%), Gaps = 8/327 (2%)
Query: 77 WIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRFMKPRRA 136
W+ G + +A S + + + C+ F ++++ PE + +++A+ R KP R
Sbjct: 219 WVDHG-----RRPEARSPWHQGREEACREF-RRVVESRPE--DWQAVVSAFERIPKPSRR 270
Query: 137 DWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAM 196
++ ++ + + + E N +T ++H Y ++ + + M
Sbjct: 271 EFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGVLSCVEEM 330
Query: 197 KRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGML 256
K G VT ++++ ++K + + A+ F+E K L+ Y +++ A+ ++G +
Sbjct: 331 KAEGIELTIVTYSIIIAGFAKINDAQSADNLFKEAKAKLGDLNGIIYSNIIHAHCQSGNM 390
Query: 257 DRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALL 316
DR E L+REM+ + + Y +++ GY++ + + VFE ++ TP L
Sbjct: 391 DRAEELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCL 450
Query: 317 INAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
IN Y G+ KA + M G++ ++K ++++S + A ++ + G
Sbjct: 451 INLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEMLKSGL 510
Query: 377 MVGKEASCTLAAWFKRLGVVEEVEHVL 403
+ L F ++G ++ +L
Sbjct: 511 QPDRAIYNLLIEAFCKMGNMDRAIRIL 537
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/216 (19%), Positives = 95/216 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E F +I Y +I+ Y K ++ A M+ G + T ++++ + +
Sbjct: 435 LKECCFTPSIISYGCLINLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHD 494
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A FEE+ G D+ Y ++ A+ + G +DR +L +M + + + ++
Sbjct: 495 FANAFSIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRP 554
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G+++ G+ + A + + ++ +G P LI+ Q ++A + M AG
Sbjct: 555 IIEGFAVAGDMKRALNILDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAG 614
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+ P++ +I+ + +A E+ ++ G
Sbjct: 615 ITPNEHTYTIIMRGYAANGDIGKAFEYFTKIKEGGL 650
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 79/169 (46%), Gaps = 5/169 (2%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E + ++ Y ++ K ++Q+A M + + +++ +++ G++
Sbjct: 647 EGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSTQKIARNTFVYNILIDGWARRGDVW 706
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A + +++K G P + +Y S + A +AG + R + ++ EM + + Y L+
Sbjct: 707 EAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQKVIEEMADVGLKPNLKTYTTLI 766
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPD--ARMC---ALLINAYQMAGQS 326
+G++ + A + FE ++ AG+ PD A C +LL A M G +
Sbjct: 767 KGWAKASLPDRALKSFEEMKLAGLKPDEAAYHCLVTSLLSRATVMEGST 815
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 53/314 (16%), Positives = 126/314 (40%), Gaps = 31/314 (9%)
Query: 81 GPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRFMKPRRADWLA 140
G I +++K+ + F R K C C +P + L+ +++ K +A +A
Sbjct: 418 GYTIIQDEKKCLIVFER--LKEC--------CFTPSIISYGCLINLYIKIGKVTKA--IA 465
Query: 141 VLKQLK-------------LMEHPLYLQ--VAELALLEESFEANIRD----YTKIIHGYG 181
+ K+++ L+ ++L ++ EE ++ ++ Y +I +
Sbjct: 466 ISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEMLKSGLQPDRAIYNLLIEAFC 525
Query: 182 KKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKR 241
K + A L M++ ++ ++ AG++K A + ++ G
Sbjct: 526 KMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALNILDLMRRSGCAPTVM 585
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI 301
+Y +++ ++ ++R +L +M + Y ++RGY+ NG+ A F I
Sbjct: 586 TYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAANGDIGKAFEYFTKI 645
Query: 302 QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQL 361
+ G+ D + L+ A +G+ Q A + M + + +++ + +
Sbjct: 646 KEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSTQKIARNTFVYNILIDGWARRGDV 705
Query: 362 NRALEFLIDLERDG 375
A + + ++ DG
Sbjct: 706 WEAADLMKQMKEDG 719
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 112/242 (46%)
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA 224
F ++R Y+ +IHG K Q + N AMK++GF D +V + K+G + A
Sbjct: 292 GFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKA 351
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
E EE+K +YG++V + LD +L E ++ + + +Y +L+ G
Sbjct: 352 YEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDG 411
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
+ G + A + E + G+TP+ L++A A + +A FQ+M++ P+
Sbjct: 412 FGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPN 471
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
+++++ + + N+A F D+++ G + T+ + ++G + + +
Sbjct: 472 TYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFE 531
Query: 405 EY 406
+
Sbjct: 532 RF 533
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 102/245 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++++ E N Y II +++ A L M+ + +T+ +MV KA
Sbjct: 113 VMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARK 172
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ A + FE G D +Y S++ + G +D L +M VY +
Sbjct: 173 LEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTS 232
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+R + ++G E ++F+ + G PD + ++ AG+ +K F+++R G
Sbjct: 233 LIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYG 292
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
P + ++++ K Q +++ GF + A + F + G V +
Sbjct: 293 FLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAY 352
Query: 401 HVLRE 405
+L E
Sbjct: 353 EILEE 357
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 99/233 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G GKK Q+ A M G + V T ++ + G + + F+E+
Sbjct: 195 YCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELI 254
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D + + +AG +++G ++ ++ + Y L+ G + G +
Sbjct: 255 RRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQAR 314
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
+F A++ G DAR +++ + +G+ KAY + M++ ++P+ I+
Sbjct: 315 ETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIV 374
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
K ++L+ A + + G + +L F ++G ++E +L E
Sbjct: 375 DGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEE 427
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/216 (19%), Positives = 87/216 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L+ AN YT +I + + ++ + RRG D L + KAG
Sbjct: 218 MLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGE 277
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ FE+I+ G D RSY ++ +AG + M Q + + Y A
Sbjct: 278 VEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNA 337
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G+ +G A + E ++ + P +++ + +AY F+ + G
Sbjct: 338 VVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKG 397
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+E + + ++ K +++ A L ++ + G
Sbjct: 398 IELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGL 433
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 4/176 (2%)
Query: 161 LLEES----FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS 216
L EE+ E N+ Y+ +I G+GK +I A L M ++G + T ++
Sbjct: 389 LFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALV 448
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
KA + A F+ +K + P + +Y ++ R ++ V ++M Q +
Sbjct: 449 KAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVV 508
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTA 332
Y ++ G + GN A +FE + G PDA LI A ++ +AY A
Sbjct: 509 TYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQA 564
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 69/168 (41%), Gaps = 1/168 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I GYG + ++A L ++ RG I V+ ++ K + A FE +K
Sbjct: 56 YNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK 115
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
EP + +Y ++ G ++ +L EM+ ++ ++ E
Sbjct: 116 KDAEP-NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLE 174
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
A ++FE+ G PD LI+ GQ +AY F+ M AG
Sbjct: 175 EAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAG 222
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 85/203 (41%), Gaps = 1/203 (0%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
+K +G D V+ T M+ + KAG L AEE F +++ +Y +M+M Y AG
Sbjct: 9 LKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGR 68
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
+ LL + + + ++L + A +FE ++ P++ +
Sbjct: 69 FEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-KDAEPNSSTYNI 127
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+I+ + G+ ++AY M A L P+ V +++ K +L A + + G
Sbjct: 128 IIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRG 187
Query: 376 FMVGKEASCTLAAWFKRLGVVEE 398
C+L + G V+E
Sbjct: 188 CNPDCVTYCSLIDGLGKKGQVDE 210
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 65/151 (43%), Gaps = 1/151 (0%)
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
MA + F E+K G D SY SM+ +AG L E L +M+A+ + Y ++
Sbjct: 1 MAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMI 60
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
GY G E A ++ E ++ G P ++ + +A + F+ M+K E
Sbjct: 61 MGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-E 119
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLER 373
P+ +I+ ++ A L ++E
Sbjct: 120 PNSSTYNIIIDMLCLGGRVEEAYRILDEMEH 150
>gi|297820746|ref|XP_002878256.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324094|gb|EFH54515.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 582
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 10/211 (4%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ YT ++ YG+ + NAE M+ G VT +++ + + K AEE F
Sbjct: 173 NVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAVTYQIILKTFVEGDKFKEAEEVF 232
Query: 229 EEIKLLGE---PL--DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
E LL E PL D++ Y M+ Y +AG D+ + M + V + Y +L+
Sbjct: 233 E--TLLDEKKSPLKPDQKMYHMMIYMYKKAGNYDKARKVFSSMVGKGVPQSTVTYNSLM- 289
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
S N + ++++ +Q +GI PD ALLI AY A + ++A + F+ M AG+ P
Sbjct: 290 --SFETNYKEVSKIYDQMQRSGIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRP 347
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERD 374
+ K ++L A + +A + RD
Sbjct: 348 THKAYNILLDAFAISGMVEQAKTVFKSMRRD 378
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 108/251 (43%), Gaps = 19/251 (7%)
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA 224
SFE N ++ +KI M+R G D V+ +++ Y +A + A
Sbjct: 290 SFETNYKEVSKIYD----------------QMQRSGIQPDVVSYALLIKAYGRARREEEA 333
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
FEE+ G ++Y ++ A+ +GM+++ + + + M ++ Y +L
Sbjct: 334 LSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSA 393
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
Y + EGA++ F+ I+ G P+ +I Y A +K ++ MR +G++ +
Sbjct: 394 YVNASDMEGAEKFFKRIKVDGFEPNIVTYGTMIKGYAKANDVEKMMEVYEKMRLSGIKAN 453
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
+ I+ A + AL + ++E G ++A L + + ++E + +
Sbjct: 454 QTILTTIMDASGRCKDFGSALGWYKEMESCGVPPDQKAKNVLLSLYSTQDELDEAKELT- 512
Query: 405 EYGLRETYSKI 415
GLR + I
Sbjct: 513 --GLRNETATI 521
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 66/143 (46%), Gaps = 3/143 (2%)
Query: 205 QVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLR 264
++ +++ Y K GN AE + +G + SY +++ +Y R G + E + R
Sbjct: 139 EMDFLMLITAYGKLGNFNGAERVLSVLSKMGSSPNVISYTALMESYGRGGKCNNAEAIFR 198
Query: 265 EMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI---QFAGITPDARMCALLINAYQ 321
M + + Y+ +L+ + + A+ VFE + + + + PD +M ++I Y+
Sbjct: 199 RMQSSGPEPSAVTYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYK 258
Query: 322 MAGQSQKAYTAFQNMRKAGLEPS 344
AG KA F +M G+ S
Sbjct: 259 KAGNYDKARKVFSSMVGKGVPQS 281
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 116/256 (45%), Gaps = 3/256 (1%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++R Y+ +IHG K Q + N AM ++GF D +V K+G + A
Sbjct: 556 FLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAY 615
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
E EE+K+ +YGS+V + LD +L E ++ + + +Y +L+ G+
Sbjct: 616 EVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGF 675
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
G + A + E + G+TP+ L++A + +A FQ+M++ P+
Sbjct: 676 GKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNT 735
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+++++ + + N+A F ++++ G + T+ + ++G + + +
Sbjct: 736 YTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFER 795
Query: 406 YGLRETYSKIPGSRSI 421
+ +T IP S S
Sbjct: 796 F---KTNGGIPDSASF 808
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 83/170 (48%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
MK GF+ D + ++++ +KAG + F+ + G LD R+Y ++V ++G
Sbjct: 551 MKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGK 610
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
+D+ +L EM + V+ Y +++ G + + A +FE + GI + + +
Sbjct: 611 VDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSS 670
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
LI+ + G+ +AY + M K GL P+ ++ A K +++ AL
Sbjct: 671 LIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEAL 720
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/261 (19%), Positives = 106/261 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++++ + NI Y II ++ A M+ G + +++ +MV KA
Sbjct: 376 VMKKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQ 435
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ A FE G + +Y S++ + G +D L +M +Y +
Sbjct: 436 LEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTS 495
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+R + M+G E ++++ + G PD + ++ AG+ +K F++M+ G
Sbjct: 496 LIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFG 555
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
P + ++++ K Q + + GF + A + + G V++
Sbjct: 556 FLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAY 615
Query: 401 HVLREYGLRETYSKIPGSRSI 421
VL E ++ + + SI
Sbjct: 616 EVLEEMKVKHVHPTVATYGSI 636
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/243 (19%), Positives = 98/243 (40%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E N Y +I G GKK +I +A M G + + T ++ + G +
Sbjct: 448 ERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKE 507
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
+ ++E+ G D + + +AG +++G + +M + Y L+
Sbjct: 508 DGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILI 567
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G + G + +F+A+ G DAR +++ +G+ KAY + M+ +
Sbjct: 568 HGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVH 627
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ I+ K ++L+ A + + G + +L F ++G ++E +
Sbjct: 628 PTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLI 687
Query: 403 LRE 405
L E
Sbjct: 688 LEE 690
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 105/267 (39%), Gaps = 34/267 (12%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
+E ++ +T ++ ++ Q++ A + +K D V V + + KAG++ MA
Sbjct: 207 YEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAW 266
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+ F E+K G D SY SMV +AG L E L +M+A+ + Y ++ GY
Sbjct: 267 KFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGY 326
Query: 286 SMNGNSEGAQRVFEAIQFAGITP------------------------------DAR---- 311
+ A ++ E ++ G P DA+
Sbjct: 327 GSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDAKPNIS 386
Query: 312 MCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDL 371
++I+ MAG+ +AY M AGL P+ V +++ K NQL A
Sbjct: 387 TYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESA 446
Query: 372 ERDGFMVGKEASCTLAAWFKRLGVVEE 398
G C+L + G +++
Sbjct: 447 SERGCNPNSVTYCSLIDGLGKKGKIDD 473
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 115/280 (41%), Gaps = 9/280 (3%)
Query: 90 QAISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAW-VRFMKPRRADWLAVLKQLKLM 148
QA+SQ + R V +C S + ++L V+ + P A + +++ L +
Sbjct: 584 QAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKI 643
Query: 149 EHPLYLQVAELALLEES----FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICD 204
+ L A + L EE+ E N+ Y+ +I G+GK +I A L M ++G +
Sbjct: 644 DR---LDEAYM-LFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPN 699
Query: 205 QVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLR 264
T ++ K + A F+ +K + + +Y ++ R ++ V +
Sbjct: 700 VYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQ 759
Query: 265 EMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAG 324
EM Q + Y ++ G + GN A +FE + G PD+ LI A
Sbjct: 760 EMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNAN 819
Query: 325 QSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
+ +AY F+ R G + K +L A K L +A
Sbjct: 820 RPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTECLEQA 859
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 59/135 (43%), Gaps = 2/135 (1%)
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI 301
+Y ++ A A +R LLR+M V ++ L+R + G E A + + +
Sbjct: 178 AYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEV 237
Query: 302 QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQL 361
+ + + PD + + I+ + AG A+ F ++ GL P D ++ K +L
Sbjct: 238 KGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRL 297
Query: 362 NRALEFL--IDLERD 374
A E ++ ERD
Sbjct: 298 GEAEELFGQMEAERD 312
>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 106/243 (43%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E E ++ + +++G M I++AE M+ D V+ M+ Y KAGN K
Sbjct: 218 ESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTK 277
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A E F +++ DK +Y +++ A G D L +EM+ + + + Y ++
Sbjct: 278 KAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVI 337
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G +G + VFE + G + + LI+AY G +A F+ M+ G E
Sbjct: 338 GGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFE 397
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P D +I++ K +L+ A+E+ + + V +L + G V+E E
Sbjct: 398 PDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKF 457
Query: 403 LRE 405
E
Sbjct: 458 FEE 460
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 102/233 (43%), Gaps = 7/233 (3%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E E Y+ +I G K + + M ++G + T ++ Y K GN+
Sbjct: 323 ERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVN 382
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A FE +K G D +YG +V ++G LD EV V + Y +L+
Sbjct: 383 EAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLI 442
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G G + A++ FE + G D+ LI+A +G+ ++A F+ M K G +
Sbjct: 443 DGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCD 502
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGV 395
+ +++S KE++ AL+ L DL M+ K + T A+ F+ L V
Sbjct: 503 QTVYTYTILISGLFKEHRNEEALK-LWDL-----MIDKGITPTTAS-FRALSV 548
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 77/188 (40%)
Query: 195 AMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG 254
A K++ +I ++ + S + + F E K G + + S++ ++ G
Sbjct: 145 AGKQKNYIHKIECYVSLIDVLSLSSDFDRVRCIFGEFKEKGFLMTVFAANSLIRSFGALG 204
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
M++ + R M + + LL G + E A+RVFE ++ I PD
Sbjct: 205 MVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYN 264
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
+I Y AG ++KA F +M K LEP ++ AC E + L ++E
Sbjct: 265 TMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEER 324
Query: 375 GFMVGKEA 382
G + A
Sbjct: 325 GLEIPPHA 332
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 35/183 (19%), Positives = 71/183 (38%), Gaps = 6/183 (3%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEE---TFEEIKLLGEPLDKRSYGSMVMAYVR 252
K +GF+ +T+ + G L M EE + +K G ++ ++ V
Sbjct: 181 FKEKGFL---MTVFAANSLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVN 237
Query: 253 AGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARM 312
+ ++ E + M+ ++ Y +++GY GN++ A F ++ + PD
Sbjct: 238 SMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKIT 297
Query: 313 CALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLE 372
LI A G +Q M + GLE +L++ K+ + ++
Sbjct: 298 YLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMN 357
Query: 373 RDG 375
+ G
Sbjct: 358 KKG 360
>gi|125592120|gb|EAZ32470.1| hypothetical protein OsJ_16686 [Oryza sativa Japonica Group]
Length = 879
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 133/292 (45%), Gaps = 3/292 (1%)
Query: 103 CKAFVKQIICVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALL 162
C+ F ++++ P+ N +++A+ R KP R ++ ++ + + +
Sbjct: 213 CREF-RRVVESRPD--NWQAVVSAFERIPKPSRREFGLMIVYYAKRGDKHHARATFENMR 269
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E N +T ++H Y ++ A + + MK G VT ++++ ++K + +
Sbjct: 270 ARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQ 329
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A+ F+E K L+ Y +++ A+ ++G ++R E L+REM+ + +VY +++
Sbjct: 330 SADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMM 389
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
GY++ N VFE ++ G P L+N Y G+ KA + + M G++
Sbjct: 390 HGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIK 449
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
++K +++++ + A ++ R G + L F ++G
Sbjct: 450 HNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMG 501
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 113/227 (49%), Gaps = 3/227 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +IHG +K ++Q A + L M G ++ T T+++ Y+ +G++ A E F +IK
Sbjct: 560 YNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIK 619
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G LD Y +++ A ++G + + REM Q++ + +Y L+ G++ G+
Sbjct: 620 ESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVW 679
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ + + ++ G+ P+ INA AG Q+A + M GL+P+ K ++
Sbjct: 680 EAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLI 739
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEAS--CTLAAWFKRLGVVE 397
+ + +RAL+ +++ G + EAS C + + R V+E
Sbjct: 740 KGWARVSLPDRALKCFEEMKLAG-LKPDEASYHCLVTSLLSRATVME 785
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 90/203 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ IIH + + ++ AE + M+ G M+ Y+ N FE +K
Sbjct: 350 YSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLK 409
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G SYG ++ YV+ G + + + +EM++ + ++ Y L+ G+ +
Sbjct: 410 ECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFA 469
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +FE + +G+ PD + LLI A+ G +A + M+K ++PS++ I+
Sbjct: 470 NAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPII 529
Query: 353 SACEKENQLNRALEFLIDLERDG 375
+ AL+ L + R G
Sbjct: 530 EGYAVAGDMKSALDTLDLMRRSG 552
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/256 (19%), Positives = 111/256 (43%), Gaps = 4/256 (1%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E F+ +I Y +++ Y K ++ A + M+ G + T ++++ + +
Sbjct: 408 LKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHD 467
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A FEE+ G D+ Y ++ A+ + G +DR +L +M + + + ++
Sbjct: 468 FANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRP 527
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ GY++ G+ + A + ++ +G P LI+ + Q+A + M AG
Sbjct: 528 IIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAG 587
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+ P++ +I+ + +A E+ ++ G + TL + G ++
Sbjct: 588 ITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSAL 647
Query: 401 HVLREYGLRETYSKIP 416
V RE ++ KIP
Sbjct: 648 AVTREM----SFQKIP 659
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 112/242 (46%)
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA 224
F ++R Y+ +IHG K Q + N AMK++GF D +V + K+G + A
Sbjct: 424 GFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKA 483
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
E EE+K +YG++V + LD +L E ++ + + +Y +L+ G
Sbjct: 484 YEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDG 543
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
+ G + A + E + G+TP+ L++A A + +A FQ+M++ P+
Sbjct: 544 FGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPN 603
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
+++++ + + N+A F D+++ G + T+ + ++G + + +
Sbjct: 604 TYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFE 663
Query: 405 EY 406
+
Sbjct: 664 RF 665
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 102/245 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++++ E N Y II +++ A L M+ + +T+ +MV KA
Sbjct: 245 VMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARK 304
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ A + FE G D +Y S++ + G +D L +M VY +
Sbjct: 305 LEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTS 364
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+R + ++G E +VF+ + G PD + ++ AG+ +K F+++R G
Sbjct: 365 LIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYG 424
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
P + ++++ K Q +++ GF + A + F + G V +
Sbjct: 425 FLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAY 484
Query: 401 HVLRE 405
+L E
Sbjct: 485 EILEE 489
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 108/259 (41%), Gaps = 19/259 (7%)
Query: 115 PETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYT 174
P + L+ A +P RA L +L+Q++ E +E + +T
Sbjct: 43 PAFSAYTVLIGALAEARRPERA--LELLRQMQ----------------EVGYEVGVHLFT 84
Query: 175 KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLL 234
++ ++ Q+ +A + +K D V V + + KAGN+ MA + F E+K
Sbjct: 85 TLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQ 144
Query: 235 GEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGA 294
G D SY SM+ +AG L E L +M+A+ + Y ++ GY G E A
Sbjct: 145 GLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDA 204
Query: 295 QRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSA 354
++ E ++ G P ++ + +A + F+ M+K EP+ +I+
Sbjct: 205 YKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYNIIIDM 263
Query: 355 CEKENQLNRALEFLIDLER 373
++ A L ++E
Sbjct: 264 LCLGGRVEEAYRILDEMEH 282
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 99/233 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G GKK Q+ A M G + V T ++ + G + + F+E+
Sbjct: 327 YCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELI 386
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D + + +AG +++G ++ ++ + Y L+ G + G +
Sbjct: 387 RRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQAR 446
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
+F A++ G DAR +++ + +G+ KAY + M++ ++P+ I+
Sbjct: 447 ETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIV 506
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
K ++L+ A + + G + +L F ++G ++E +L E
Sbjct: 507 DGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEE 559
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/216 (19%), Positives = 87/216 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L+ AN YT +I + + ++ + RRG D L + KAG
Sbjct: 350 MLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGE 409
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ FE+I+ G D RSY ++ +AG + M Q + + Y A
Sbjct: 410 VEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNA 469
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G+ +G A + E ++ + P +++ + +AY F+ + G
Sbjct: 470 VVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKG 529
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+E + + ++ K +++ A L ++ + G
Sbjct: 530 IELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGL 565
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 78/180 (43%), Gaps = 6/180 (3%)
Query: 161 LLEES----FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS 216
L EE+ E N+ Y+ +I G+GK +I A L M ++G + T ++
Sbjct: 521 LFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALV 580
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
KA + A F+ +K + P + +Y ++ R ++ V ++M Q +
Sbjct: 581 KAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVV 640
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAY--TAFQ 334
Y ++ G + GN A +FE + G PDA LI A ++ +AY T +Q
Sbjct: 641 TYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQTTVYQ 700
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 69/168 (41%), Gaps = 1/168 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I GYG + ++A L ++ RG I V+ ++ K + A FE +K
Sbjct: 188 YNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK 247
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
EP + +Y ++ G ++ +L EM+ ++ ++ E
Sbjct: 248 KDAEP-NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLE 306
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
A ++FE+ G PD LI+ GQ +AY F+ M AG
Sbjct: 307 EAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAG 354
>gi|115461420|ref|NP_001054310.1| Os04g0684500 [Oryza sativa Japonica Group]
gi|113565881|dbj|BAF16224.1| Os04g0684500 [Oryza sativa Japonica Group]
Length = 901
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 133/292 (45%), Gaps = 3/292 (1%)
Query: 103 CKAFVKQIICVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALL 162
C+ F ++++ P+ N +++A+ R KP R ++ ++ + + +
Sbjct: 235 CREF-RRVVESRPD--NWQAVVSAFERIPKPSRREFGLMIVYYAKRGDKHHARATFENMR 291
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E N +T ++H Y ++ A + + MK G VT ++++ ++K + +
Sbjct: 292 ARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQ 351
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A+ F+E K L+ Y +++ A+ ++G ++R E L+REM+ + +VY +++
Sbjct: 352 SADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMM 411
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
GY++ N VFE ++ G P L+N Y G+ KA + + M G++
Sbjct: 412 HGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIK 471
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
++K +++++ + A ++ R G + L F ++G
Sbjct: 472 HNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMG 523
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 113/227 (49%), Gaps = 3/227 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +IHG +K ++Q A + L M G ++ T T+++ Y+ +G++ A E F +IK
Sbjct: 582 YNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIK 641
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G LD Y +++ A ++G + + REM Q++ + +Y L+ G++ G+
Sbjct: 642 ESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVW 701
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ + + ++ G+ P+ INA AG Q+A + M GL+P+ K ++
Sbjct: 702 EAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLI 761
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEAS--CTLAAWFKRLGVVE 397
+ + +RAL+ +++ G + EAS C + + R V+E
Sbjct: 762 KGWARVSLPDRALKCFEEMKLAG-LKPDEASYHCLVTSLLSRATVME 807
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 90/203 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ IIH + + ++ AE + M+ G M+ Y+ N FE +K
Sbjct: 372 YSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLK 431
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G SYG ++ YV+ G + + + +EM++ + ++ Y L+ G+ +
Sbjct: 432 ECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFA 491
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +FE + +G+ PD + LLI A+ G +A + M+K ++PS++ I+
Sbjct: 492 NAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPII 551
Query: 353 SACEKENQLNRALEFLIDLERDG 375
+ AL+ L + R G
Sbjct: 552 EGYAVAGDMKSALDTLDLMRRSG 574
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/256 (19%), Positives = 111/256 (43%), Gaps = 4/256 (1%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E F+ +I Y +++ Y K ++ A + M+ G + T ++++ + +
Sbjct: 430 LKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHD 489
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A FEE+ G D+ Y ++ A+ + G +DR +L +M + + + ++
Sbjct: 490 FANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRP 549
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ GY++ G+ + A + ++ +G P LI+ + Q+A + M AG
Sbjct: 550 IIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAG 609
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+ P++ +I+ + +A E+ ++ G + TL + G ++
Sbjct: 610 ITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSAL 669
Query: 401 HVLREYGLRETYSKIP 416
V RE ++ KIP
Sbjct: 670 AVTREM----SFQKIP 681
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 119/259 (45%), Gaps = 15/259 (5%)
Query: 153 YLQVAELALLEESFEA----NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTL 208
Y+Q ++ + E FE+ NI + +I GYG+ I A M +R D V+
Sbjct: 307 YVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQR----DCVSW 362
Query: 209 TVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
++ Y+++G+ + A F EIK GE L++ ++G + L+ G+ + +
Sbjct: 363 AAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVK 422
Query: 269 QEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
G V ALL Y G+ + A FE I+ + M A Y G ++
Sbjct: 423 MGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLA----GYARHGFGRQ 478
Query: 329 AYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMV--GKEASCTL 386
A T F++M+ AG++P + + +LSAC L+R E+ + +D ++ K +C +
Sbjct: 479 ALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMI 538
Query: 387 AAWFKRLGVVEEVEHVLRE 405
R G +EE + ++R
Sbjct: 539 DL-LGRAGRLEEAQDLIRN 556
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 92/218 (42%), Gaps = 26/218 (11%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E + ++ + ++ G+ +K ++ +A M R D ++ M+ Y++ G
Sbjct: 195 LFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVR----DAISWNTMISGYAQGGG 250
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM-DAQEVYVGSEVYK 279
L A F+E D ++ +MV YV+ GMLD + EM + EV Y
Sbjct: 251 LSQARRLFDE----SPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEV-----SYN 301
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
A++ GY + A+ +FE++ I+ M I Y G +A F M
Sbjct: 302 AMIAGYVQTKKMDIARELFESMPCRNISSWNTM----ITGYGQIGDIAQARKFFDMM--- 354
Query: 340 GLEPSDKCV--ALILSACEKENQLNRALEFLIDLERDG 375
P CV A I++ + AL +++++DG
Sbjct: 355 ---PQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDG 389
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 85/196 (43%), Gaps = 9/196 (4%)
Query: 152 LYLQVAELALLEESFEA----NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVT 207
+Y + + ++FE ++ + ++ GY + + A +MK G D++T
Sbjct: 438 MYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEIT 497
Query: 208 LTVMVVMYSKAGNLKMAEETFEEI-KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
+ ++ S G L E F + K G + Y M+ RAG L+ + L+R M
Sbjct: 498 MVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNM 557
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
Q G+ + ALL ++GN+E ++ E + F ++ M LL N Y +G+
Sbjct: 558 PFQP---GAASWGALLGASRIHGNTELGEKAAEMV-FKMEPQNSGMYVLLSNLYAASGRW 613
Query: 327 QKAYTAFQNMRKAGLE 342
A MR G++
Sbjct: 614 VDADKMRSKMRDIGVQ 629
>gi|168036199|ref|XP_001770595.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678116|gb|EDQ64578.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 743
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 117/279 (41%), Gaps = 37/279 (13%)
Query: 172 DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEI 231
++ K ++ YG++ +I+ AE+ + M+R G V M+ Y KAG + A FE++
Sbjct: 152 NWLKQMNTYGQQGKIEEAEHIMDTMERLGMHLGVVGYNSMITAYGKAGLYEKALRLFEKM 211
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
K G D+ +Y M+ A RAG L + M + S + L+ Y N
Sbjct: 212 KEAGLEPDEVTYSCMIGACGRAGKLRDALDYFQAMKRLGIMPASSNFNTLISLYGKARNV 271
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK----------------------- 328
G RV ++ G TPD++ ++ AY+ AGQ++K
Sbjct: 272 VGIVRVLADMKNFGCTPDSQTLDAVVRAYERAGQTKKVVQVLSLLREAGWVEDTESYGTL 331
Query: 329 ------------AYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
A + F MRKAG+ P + ++ AC+ A D++ G
Sbjct: 332 LHVYLKCNLQKEALSVFSAMRKAGMAPKEYMCRSLICACKDAGMFEDATNVFRDMQSAGV 391
Query: 377 MVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRETYSKI 415
+ E SCT+ G V++ E + R LR + SK+
Sbjct: 392 VPSLETSCTMINVHGLKGDVKQAEELFRS--LRSSVSKL 428
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 101/227 (44%), Gaps = 6/227 (2%)
Query: 150 HPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLT 209
H ++ ++ ++ + + N+ +I YGK + A + ++ G + D++T +
Sbjct: 521 HKIFQEMIDVGCIPNTITFNV-----MIDLYGKSGMLDRARDASKLAQQLG-VADKITFS 574
Query: 210 VMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQ 269
++ Y K + + E T E++ G +Y ++ AY +AG LD+ E ++ M+
Sbjct: 575 TLINSYGKKQDFRNMEATLWEMQNAGHGGSLEAYNCVLDAYGKAGHLDKLEDVIARMEKS 634
Query: 270 EVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
+ + Y L+ Y + + +F +Q G PD +I Y A KA
Sbjct: 635 GLQMDLASYNILINIYGRHTKIAEMEALFHKMQEEGFIPDRWTYNTMIRTYGYADYPDKA 694
Query: 330 YTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
F+ M+ +G+ P ++++A EK L A + + + + G+
Sbjct: 695 VDTFKMMQDSGIMPDRVTYVMLVAAFEKAGNLLEAARWSLWMTQAGY 741
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 105/275 (38%), Gaps = 46/275 (16%)
Query: 172 DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEI 231
++ +I YGK + L MK G D TL +V Y +AG K + +
Sbjct: 257 NFNTLISLYGKARNVVGIVRVLADMKNFGCTPDSQTLDAVVRAYERAGQTKKVVQVLSLL 316
Query: 232 KLLGEPLDKRSYGSMVMAYVR-----------------------------------AGML 256
+ G D SYG+++ Y++ AGM
Sbjct: 317 REAGWVEDTESYGTLLHVYLKCNLQKEALSVFSAMRKAGMAPKEYMCRSLICACKDAGMF 376
Query: 257 DRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALL 316
+ + R+M + V E ++ + + G+ + A+ +F +++ + D ++
Sbjct: 377 EDATNVFRDMQSAGVVPSLETSCTMINVHGLKGDVKQAEELFRSLRSSVSKLDIIAYNVI 436
Query: 317 INAYQMAGQSQKAYTAFQNMRKA-GLEPSDKCVALILSACEKENQLNRALEFL-----ID 370
IN Y G ++A+ ++ M + GL P +L C+K N +A E D
Sbjct: 437 INVYMRYGMHEEAFRIYKLMEEEDGLLPDSYTYHSMLRMCQKCNLQTQAEEIYWRLRNSD 496
Query: 371 LERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+E D M +C L R +EEV + +E
Sbjct: 497 VELDEVM----CNCVLNTC-ARFLPLEEVHKIFQE 526
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 79/180 (43%), Gaps = 1/180 (0%)
Query: 186 IQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGS 245
++A N M+ G + T M+ ++ G++K AEE F ++ LD +Y
Sbjct: 376 FEDATNVFRDMQSAGVVPSLETSCTMINVHGLKGDVKQAEELFRSLRSSVSKLDIIAYNV 435
Query: 246 MVMAYVRAGMLDRGEVLLREMDAQE-VYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFA 304
++ Y+R GM + + + M+ ++ + S Y ++LR A+ ++ ++ +
Sbjct: 436 IINVYMRYGMHEEAFRIYKLMEEEDGLLPDSYTYHSMLRMCQKCNLQTQAEEIYWRLRNS 495
Query: 305 GITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
+ D MC ++N ++ + FQ M G P+ +++ K L+RA
Sbjct: 496 DVELDEVMCNCVLNTCARFLPLEEVHKIFQEMIDVGCIPNTITFNVMIDLYGKSGMLDRA 555
>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
Length = 1765
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 92/210 (43%)
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL 221
+ N YT +IHG+ + ++ A + L+ M RG D VT ++ AG +
Sbjct: 1314 IRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKV 1373
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
A E++ D Y ++ + ML + +L EM + V VY L
Sbjct: 1374 SEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATL 1433
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+ G+ + N A+++FE ++ GI PD C +I Y G +A NMRK G
Sbjct: 1434 IDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGC 1493
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDL 371
P + ++S K+ LN AL +L D+
Sbjct: 1494 IPDEFTYTTVISGYAKQGNLNGALRWLCDM 1523
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 86/204 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+ E ++ Y +I G KK + A+N L M + D+ ++ + ++ N
Sbjct: 1383 MTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSEN 1442
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A + FE ++ G D S +M+ Y + GM+ + + M Y
Sbjct: 1443 LGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTT 1502
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ GY+ GN GA R + P+ + LIN Y G + A F NM+
Sbjct: 1503 VISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEA 1562
Query: 341 LEPSDKCVALILSACEKENQLNRA 364
L P+ +++ + K++++ RA
Sbjct: 1563 LSPNVVTYTILIGSLFKKDKVLRA 1586
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 83/205 (40%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ F + Y +I+ GKK ++ + L M++RGF + ++ K +
Sbjct: 1211 KGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQ 1270
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A +++ G D ++ +++ G + + E LRE +E+ Y L+
Sbjct: 1271 AMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIH 1330
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G+ M G A + + G TPD LI+ +AG+ +A + M + + P
Sbjct: 1331 GFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFP 1390
Query: 344 SDKCVALILSACEKENQLNRALEFL 368
+++S K+ L A L
Sbjct: 1391 DVNIYNVLISGLCKKRMLPAAKNIL 1415
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 55/126 (43%)
Query: 243 YGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQ 302
Y ++ Y R G + RG +LL EM+ + Y +L+ G+ E +F ++
Sbjct: 1185 YNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMR 1244
Query: 303 FAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLN 362
G +P+ ++ +I+A + +A + M +G +P +++ E +
Sbjct: 1245 KRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVR 1304
Query: 363 RALEFL 368
+A FL
Sbjct: 1305 KAEHFL 1310
>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 114/249 (45%), Gaps = 6/249 (2%)
Query: 131 MKPRRADW---LAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQ 187
M+P R + LAV + L E L ++ + +I Y ++ K Q+
Sbjct: 179 MQPDRITFNSLLAVCSKGGLWEAARSLSCE---MVNRGIDQDIFTYNTLLDAVCKGGQLD 235
Query: 188 NAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMV 247
A + M + + + VT + M+ Y+KAG L A F E+K LG LD+ SY +++
Sbjct: 236 MAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLL 295
Query: 248 MAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGIT 307
Y + G + + REM+ + Y ALL GY + ++VFE ++ ++
Sbjct: 296 SIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVS 355
Query: 308 PDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
P+ + LI+ Y G ++A F+ +KAGL+ + ++ A K + A+
Sbjct: 356 PNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSL 415
Query: 368 LIDLERDGF 376
L ++ ++G
Sbjct: 416 LDEMTKEGI 424
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 80/176 (45%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y+ +I GY K ++ +A N MK G D+V+ ++ +Y+K G + A +
Sbjct: 252 NVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVC 311
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++ G D +Y +++ Y + D + EM A+ V Y L+ YS
Sbjct: 312 REMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKG 371
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
G A VF + AG+ D + + LI+A G + A + M K G+ P+
Sbjct: 372 GLYREAMDVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 427
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 1/174 (0%)
Query: 169 NIRDYTKIIHGYGKK-MQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
N+ Y +I GK ++ + M R G D++T ++ + SK G + A
Sbjct: 146 NLVTYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARSL 205
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
E+ G D +Y +++ A + G LD ++ EM A+ + Y ++ GY+
Sbjct: 206 SCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAK 265
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
G + A+ +F ++F GI+ D L++ Y G+ ++A + M +G+
Sbjct: 266 AGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGI 319
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 71/158 (44%), Gaps = 6/158 (3%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y ++ GYGK+ + MK R + +T + ++ +YSK G + A + F
Sbjct: 322 DVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVF 381
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E K G D Y +++ A + G+++ LL EM + + Y +++ +
Sbjct: 382 REFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRP 441
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
+E + AG T + ++ +L +A + A +S
Sbjct: 442 ATTE------SVVDDAGQTSELQIDSLSSSAVEKATKS 473
Score = 38.1 bits (87), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G E A+ VF+A G + +I+AY +G +A F +M+ GL+P+
Sbjct: 91 GKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTY 150
Query: 349 ALILSACEKEN-QLNRALEFLIDLERDG 375
++ AC K + R LE ++ R+G
Sbjct: 151 NAVIDACGKGGVEFKRVLEIFDEMLRNG 178
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 120/259 (46%), Gaps = 15/259 (5%)
Query: 153 YLQVAELALLEESFEA----NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTL 208
Y+Q ++ + E FEA NI + +I GYG+ I A M +R D V+
Sbjct: 304 YVQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQR----DCVSW 359
Query: 209 TVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
++ Y++ G+ + A F E+K GE ++ ++ + L+ G+ + ++
Sbjct: 360 AAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVK 419
Query: 269 QEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
G V ALL Y G+++ A VFE I+ D +I Y G ++
Sbjct: 420 AGFETGCFVGNALLGMYFKCGSTDEANDVFEGIE----EKDVVSWNTMIAGYARHGFGRQ 475
Query: 329 AYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM--VGKEASCTL 386
A F++M+KAG++P + + +LSAC ++R E+ ++RD + K +C +
Sbjct: 476 ALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMI 535
Query: 387 AAWFKRLGVVEEVEHVLRE 405
R G +EE E+++R
Sbjct: 536 DL-LGRAGRLEEAENLMRN 553
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 95/233 (40%), Gaps = 29/233 (12%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E + + ++ GY K+ + +A M R D ++ M+ Y++ G+
Sbjct: 192 LFESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVR----DVISWNTMISGYAQVGD 247
Query: 221 LKMAEETFEEIKLLGEPL-DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV-Y 278
L A+ F E P+ D ++ +MV YV+ GM+D EM V +E+ Y
Sbjct: 248 LSQAKRLFNE-----SPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMP-----VKNEISY 297
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
A+L GY A +FEA+ I+ M I Y G +A F M
Sbjct: 298 NAMLAGYVQYKKMVIAGELFEAMPCRNISSWNTM----ITGYGQNGGIAQARKLFDMM-- 351
Query: 339 AGLEPSDKCV--ALILSACEKENQLNRALEFLIDLERDGFMVGKEA-SCTLAA 388
P CV A I+S + AL ++++RDG + SC L+
Sbjct: 352 ----PQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALST 400
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 7/178 (3%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E ++ + +I GY + + A +MK+ G D++T+ ++ S +G + E
Sbjct: 454 EKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTE 513
Query: 227 TFEEIK--LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
F + +P K Y M+ RAG L+ E L+R M G+ + ALL
Sbjct: 514 YFYSMDRDYNVKPTSKH-YTCMIDLLGRAGRLEEAENLMRNMPFDP---GAASWGALLGA 569
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
++GN+E ++ E + F ++ M LL N Y +G+ MR+AG++
Sbjct: 570 SRIHGNTELGEKAAEMV-FKMEPQNSGMYVLLSNLYAASGRWVDVGKMRSKMREAGVQ 626
>gi|111154024|dbj|BAF02664.1| pentatricopeptide repeat protein [Physcomitrella patens]
gi|111185880|dbj|BAF02672.1| pentatricopeptide repeat protein [Physcomitrella patens]
Length = 531
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
EA+ Y +I+ + K + A L M+ G CD++T T ++ YS+ MAE
Sbjct: 316 EASTTLYNTLINIHSKAEAPEKARAVLQLMQADGCQCDEITYTSVMEAYSRNKQPLMAES 375
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
E+K G SYG ++ AY RAG L E +LR M + E+Y ++ GY+
Sbjct: 376 MMGEMKRAGIQPGPVSYGVLISAYCRAGRLGDAERILRAMQNAKCKPTVEIYNMMISGYA 435
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
A+R+F+ +Q G+ PDA LI+ Y + + ++A + M++ G +P+
Sbjct: 436 SAKMRSQAERMFQTMQDCGLRPDAVTFNTLISMYIKSRKRKQAEDCYIRMQQLGCKPNAV 495
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGF 376
++L A N A +D+ + G
Sbjct: 496 TYKILLKAYTDYNNSIDAERIRLDMRKAGI 525
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 102/239 (42%), Gaps = 1/239 (0%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
+ ++ YT +I G+GK + M+R D TV++ Y G +AE
Sbjct: 176 LKPDVVSYTALIQGFGKLKSYNKVTDVFSRMQRNRCPPDLKLCTVLISTYGNGGLPVLAE 235
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+ + G D +Y ++V AY + G+ + E L +M + V Y AL+ Y
Sbjct: 236 SAMQYAQAQGLQPDAIAYTALVHAYAQEGLWEEAEKTLSDMLDVGI-VDDRPYAALVAAY 294
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
G ++ ++ E ++ +G+ + LIN + A +KA Q M+ G + +
Sbjct: 295 GKAGLTDNVNKILETMKASGVEASTTLYNTLINIHSKAEAPEKARAVLQLMQADGCQCDE 354
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
++ A + Q A + +++R G G + L + + R G + + E +LR
Sbjct: 355 ITYTSVMEAYSRNKQPLMAESMMGEMKRAGIQPGPVSYGVLISAYCRAGRLGDAERILR 413
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 119/263 (45%), Gaps = 11/263 (4%)
Query: 112 CVSPETGNLSDLLAAWVRF----MKPRRADWLAVLKQLKLMEHPLYLQVAEL--ALLEES 165
CV + G + D + + RF +KP + A+++ ++ Y +V ++ +
Sbjct: 155 CV--KDGRMRDAMTIFKRFEGAGLKPDVVSYTALIQGFGKLKS--YNKVTDVFSRMQRNR 210
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
+++ T +I YG AE+ + + +G D + T +V Y++ G + AE
Sbjct: 211 CPPDLKLCTVLISTYGNGGLPVLAESAMQYAQAQGLQPDAIAYTALVHAYAQEGLWEEAE 270
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+T ++ +G +D R Y ++V AY +AG+ D +L M A V + +Y L+ +
Sbjct: 271 KTLSDMLDVGI-VDDRPYAALVAAYGKAGLTDNVNKILETMKASGVEASTTLYNTLINIH 329
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
S E A+ V + +Q G D ++ AY Q A + M++AG++P
Sbjct: 330 SKAEAPEKARAVLQLMQADGCQCDEITYTSVMEAYSRNKQPLMAESMMGEMKRAGIQPGP 389
Query: 346 KCVALILSACEKENQLNRALEFL 368
+++SA + +L A L
Sbjct: 390 VSYGVLISAYCRAGRLGDAERIL 412
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 85/205 (41%)
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
R Y ++ YGK N L MK G ++ ++SKA + A +
Sbjct: 285 RPYAALVAAYGKAGLTDNVNKILETMKASGVEASTTLYNTLINIHSKAEAPEKARAVLQL 344
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
++ G D+ +Y S++ AY R E ++ EM + G Y L+ Y G
Sbjct: 345 MQADGCQCDEITYTSVMEAYSRNKQPLMAESMMGEMKRAGIQPGPVSYGVLISAYCRAGR 404
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
A+R+ A+Q A P + ++I+ Y A +A FQ M+ GL P
Sbjct: 405 LGDAERILRAMQNAKCKPTVEIYNMMISGYASAKMRSQAERMFQTMQDCGLRPDAVTFNT 464
Query: 351 ILSACEKENQLNRALEFLIDLERDG 375
++S K + +A + I +++ G
Sbjct: 465 LISMYIKSRKRKQAEDCYIRMQQLG 489
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 80/182 (43%), Gaps = 1/182 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT ++H Y ++ + AE TL M G + D +V Y KAG + E +K
Sbjct: 253 YTALVHAYAQEGLWEEAEKTLSDMLDVGIV-DDRPYAALVAAYGKAGLTDNVNKILETMK 311
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G Y +++ + +A ++ +L+ M A Y +++ YS N
Sbjct: 312 ASGVEASTTLYNTLINIHSKAEAPEKARAVLQLMQADGCQCDEITYTSVMEAYSRNKQPL 371
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ + ++ AGI P +LI+AY AG+ A + M+ A +P+ + +++
Sbjct: 372 MAESMMGEMKRAGIQPGPVSYGVLISAYCRAGRLGDAERILRAMQNAKCKPTVEIYNMMI 431
Query: 353 SA 354
S
Sbjct: 432 SG 433
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 68/163 (41%), Gaps = 1/163 (0%)
Query: 241 RSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEA 300
+ Y S ++ V+ G + + + + + Y AL++G+ + VF
Sbjct: 146 KDYNSALLNCVKDGRMRDAMTIFKRFEGAGLKPDVVSYTALIQGFGKLKSYNKVTDVFSR 205
Query: 301 IQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQ 360
+Q PD ++C +LI+ Y G A +A Q + GL+P ++ A +E
Sbjct: 206 MQRNRCPPDLKLCTVLISTYGNGGLPVLAESAMQYAQAQGLQPDAIAYTALVHAYAQEGL 265
Query: 361 LNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
A + L D+ D +V L A + + G+ + V +L
Sbjct: 266 WEEAEKTLSDM-LDVGIVDDRPYAALVAAYGKAGLTDNVNKIL 307
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 65/170 (38%), Gaps = 35/170 (20%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT ++ Y + Q AE+ + MKR G V+ V++ Y +AG L AE ++
Sbjct: 357 YTSVMEAYSRNKQPLMAESMMGEMKRAGIQPGPVSYGVLISAYCRAGRLGDAERILRAMQ 416
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMD------------------------- 267
Y M+ Y A M + E + + M
Sbjct: 417 NAKCKPTVEIYNMMISGYASAKMRSQAERMFQTMQDCGLRPDAVTFNTLISMYIKSRKRK 476
Query: 268 -AQEVYV---------GSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGIT 307
A++ Y+ + YK LL+ Y+ NS A+R+ ++ AGI+
Sbjct: 477 QAEDCYIRMQQLGCKPNAVTYKILLKAYTDYNNSIDAERIRLDMRKAGIS 526
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 119/258 (46%), Gaps = 15/258 (5%)
Query: 153 YLQVAELALLEESFEA----NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTL 208
Y+Q ++ + E FE+ NI + +I GYG+ I A M +R D V+
Sbjct: 307 YVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQR----DCVSW 362
Query: 209 TVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
++ Y+++G+ + A F EIK GE L++ ++G + L+ G+ + +
Sbjct: 363 AAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVK 422
Query: 269 QEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
G V ALL Y G+ + A FE I+ + M A Y G ++
Sbjct: 423 MGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLA----GYARHGFGRQ 478
Query: 329 AYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMV--GKEASCTL 386
A T F++M+ AG++P + + +LSAC L+R E+ + +D ++ K +C +
Sbjct: 479 ALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMI 538
Query: 387 AAWFKRLGVVEEVEHVLR 404
R G +EE + ++R
Sbjct: 539 DL-LGRAGRLEEAQDLIR 555
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 92/218 (42%), Gaps = 26/218 (11%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E + ++ + ++ G+ +K ++ +A M R D ++ M+ Y++ G
Sbjct: 195 LFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVR----DAISWNTMISGYAQGGG 250
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM-DAQEVYVGSEVYK 279
L A F+E D ++ +MV YV+ GMLD + EM + EV Y
Sbjct: 251 LSQARRLFDE----SPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEV-----SYN 301
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
A++ GY + A+ +FE++ I+ M I Y G +A F M
Sbjct: 302 AMIAGYVQTKKMDIARELFESMPCRNISSWNTM----ITGYGQIGDIAQARKFFDMM--- 354
Query: 340 GLEPSDKCV--ALILSACEKENQLNRALEFLIDLERDG 375
P CV A I++ + AL +++++DG
Sbjct: 355 ---PQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDG 389
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 85/196 (43%), Gaps = 9/196 (4%)
Query: 152 LYLQVAELALLEESFEA----NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVT 207
+Y + + ++FE ++ + ++ GY + + A +MK G D++T
Sbjct: 438 MYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEIT 497
Query: 208 LTVMVVMYSKAGNLKMAEETFEEI-KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
+ ++ S G L E F + K G + Y M+ RAG L+ + L+R M
Sbjct: 498 MVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNM 557
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
Q G+ + ALL ++GN+E ++ E + F ++ M LL N Y +G+
Sbjct: 558 PFQP---GAASWGALLGASRIHGNTELGEKAAEMV-FKMEPQNSGMYVLLSNLYAASGRW 613
Query: 327 QKAYTAFQNMRKAGLE 342
A MR G++
Sbjct: 614 VDADKMRSKMRDIGVQ 629
>gi|255552808|ref|XP_002517447.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543458|gb|EEF44989.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 654
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 95/198 (47%), Gaps = 4/198 (2%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E N+ Y +I YGK ++ + A N + M++RG + +T + ++ ++ KAG L A
Sbjct: 376 EQNVVTYNTMIKIYGKSLEHEKATNLVQEMQKRGIEPNAITYSTIISIWGKAGKLDRAAM 435
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
F++++ G +D+ Y +M++AY RAG++ + LL ++ ++ K L R
Sbjct: 436 LFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHDLKCPDIIPRDTAIKILARA-- 493
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G E A VF AG D + +I + + F+ MR AG P
Sbjct: 494 --GRIEEATWVFRQAFDAGEVKDISVFRCMIELFSRNKRPANVVEVFEKMRGAGYFPDSD 551
Query: 347 CVALILSACEKENQLNRA 364
+AL+L+A K + +A
Sbjct: 552 VIALVLNAYGKLREFEKA 569
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 101/233 (43%), Gaps = 4/233 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ ++ Y + + A + M D +T +M+ +Y + +K A+ F ++
Sbjct: 277 YSTLLSVYVENEKFVEALSVFAEMNEANCSLDLMTCNIMIDVYGQLDMVKEADRLFWSMR 336
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+G + SY +++ Y A + L R M +E+ Y +++ Y + E
Sbjct: 337 KMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 396
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + +Q GI P+A + +I+ + AG+ +A FQ +R +G+E ++
Sbjct: 397 KATNLVQEMQKRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMI 456
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
A E+ + A L DL+ + A LA R G +EE V R+
Sbjct: 457 VAYERAGLVAHAKRLLHDLKCPDIIPRDTAIKILA----RAGRIEEATWVFRQ 505
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 95/233 (40%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+ +GK + A + M+ G + D V+ + ++ +Y + A F E+
Sbjct: 242 YNSMINVFGKARLFREARMLVHEMREVGVLPDTVSYSTLLSVYVENEKFVEALSVFAEMN 301
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
LD + M+ Y + M+ + L M + Y LL+ Y
Sbjct: 302 EANCSLDLMTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTLLKVYGEAELFG 361
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +F +Q I + +I Y + + +KA Q M+K G+EP+ + I+
Sbjct: 362 EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQKRGIEPNAITYSTII 421
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
S K +L+RA L G + + T+ ++R G+V + +L +
Sbjct: 422 SIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHD 474
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 73/172 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK + L M++ D V + ++ + K + A F +K
Sbjct: 172 YSTLITSFGKAGMFDESLFWLQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLK 231
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y SM+ + +A + +L+ EM V + Y LL Y N
Sbjct: 232 RSGITPDLVAYNSMINVFGKARLFREARMLVHEMREVGVLPDTVSYSTLLSVYVENEKFV 291
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF + A + D C ++I+ Y ++A F +MRK G+EP+
Sbjct: 292 EALSVFAEMNEANCSLDLMTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPN 343
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 8/170 (4%)
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
+A +A F+E++ D+ +Y +++ ++ +AGM D L++M+ V
Sbjct: 146 RAKKWDLAHGLFDEMRQRALSPDRYTYSTLITSFGKAGMFDESLFWLQQMEQDRVSGDLV 205
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
+Y L+ + A +F ++ +GITPD +IN + A ++A M
Sbjct: 206 LYSNLIELSRKLCDYSKAISIFMRLKRSGITPDLVAYNSMINVFGKARLFREARMLVHEM 265
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
R+ G+ P + +LS + + AL ++ EA+C+L
Sbjct: 266 REVGVLPDTVSYSTLLSVYVENEKFVEALSVFAEM--------NEANCSL 307
>gi|357138821|ref|XP_003570985.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Brachypodium distachyon]
Length = 613
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 102/208 (49%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
MK+ + T T+M+ +Y K+ A + F E++ +G + +Y ++V A+ R G+
Sbjct: 283 MKKERCRTNTETYTLMINVYGKSKQPMSAMKIFNEMQSIGCKANICTYTALVNAFAREGL 342
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
++ E + +M Y AL+ YS G +GA +F +Q G PD +
Sbjct: 343 CEKAEEVFEQMQQAGHEPDVYAYNALMEAYSRAGFPQGASEIFSLMQHMGCEPDRASYNI 402
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
L++AY AG ++A F+++++ G+ P+ K L+LSA + + R + + L + G
Sbjct: 403 LVDAYGRAGLHREAEATFESLKQQGMAPTMKSHMLLLSAHARSGNVGRCEQVMAQLHKSG 462
Query: 376 FMVGKEASCTLAAWFKRLGVVEEVEHVL 403
A + + R G ++++E +L
Sbjct: 463 LRPDTFALNAMLHAYARAGRLDDMERLL 490
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 110/266 (41%), Gaps = 3/266 (1%)
Query: 137 DWLAVLKQLKLMEH--PLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLL 194
D L V QL+L P+ + V E + SF +I Y +I YG+K Q+ AE+
Sbjct: 153 DILNVAVQLRLNRQWDPI-ISVCEWIVYRSSFRPDIICYNLLIDAYGRKRQLNKAESIYA 211
Query: 195 AMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG 254
A+ + + T +++ Y A +L AE E++ G P Y + + ++A
Sbjct: 212 AVLEAQCVPTEDTYALLLRAYCNARSLHRAEGVISEMQEHGIPPSATVYNAYLDGLLKAR 271
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
+ + + M + +E Y ++ Y + A ++F +Q G +
Sbjct: 272 CTVKAVEVYQRMKKERCRTNTETYTLMINVYGKSKQPMSAMKIFNEMQSIGCKANICTYT 331
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
L+NA+ G +KA F+ M++AG EP ++ A + A E ++
Sbjct: 332 ALVNAFAREGLCEKAEEVFEQMQQAGHEPDVYAYNALMEAYSRAGFPQGASEIFSLMQHM 391
Query: 375 GFMVGKEASCTLAAWFKRLGVVEEVE 400
G + + L + R G+ E E
Sbjct: 392 GCEPDRASYNILVDAYGRAGLHREAE 417
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 77/159 (48%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
+ANI YT +++ + ++ + AE M++ G D ++ YS+AG + A E
Sbjct: 324 KANICTYTALVNAFAREGLCEKAEEVFEQMQQAGHEPDVYAYNALMEAYSRAGFPQGASE 383
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
F ++ +G D+ SY +V AY RAG+ E + Q + + + LL ++
Sbjct: 384 IFSLMQHMGCEPDRASYNILVDAYGRAGLHREAEATFESLKQQGMAPTMKSHMLLLSAHA 443
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQ 325
+GN ++V + +G+ PD +++AY AG+
Sbjct: 444 RSGNVGRCEQVMAQLHKSGLRPDTFALNAMLHAYARAGR 482
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 82/176 (46%), Gaps = 1/176 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+ E ++ Y ++ Y + Q A M+ G D+ + ++V Y +AG +
Sbjct: 355 QAGHEPDVYAYNALMEAYSRAGFPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHR 414
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
AE TFE +K G +S+ ++ A+ R+G + R E ++ ++ + + A+L
Sbjct: 415 EAEATFESLKQQGMAPTMKSHMLLLSAHARSGNVGRCEQVMAQLHKSGLRPDTFALNAML 474
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
Y+ G + +R+ A+ AG + D + +NAY AG + AF+ +R+
Sbjct: 475 HAYARAGRLDDMERLLAAMDLAG-SADVGSHNVAVNAYARAGYLGRMEAAFEGIRR 529
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 77/184 (41%), Gaps = 6/184 (3%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+L ++ ++ + ++ + + + E + + + G D L M+ Y++AG
Sbjct: 422 SLKQQGMAPTMKSHMLLLSAHARSGNVGRCEQVMAQLHKSGLRPDTFALNAMLHAYARAG 481
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVL---LREMDAQEVYVGSE 276
L E + L G D S+ V AY RAG L R E +R ++ + ++
Sbjct: 482 RLDDMERLLAAMDLAGSA-DVGSHNVAVNAYARAGYLGRMEAAFEGIRRRKGKKGGIDAD 540
Query: 277 V--YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
V + + + GY+ +FE + AG PDA +L+ A Q ++ +
Sbjct: 541 VVSWTSRMGGYARKKEYGKCLEIFEEMVDAGCYPDAGTAKVLMAACSDERQVEQVAAIVR 600
Query: 335 NMRK 338
+M K
Sbjct: 601 SMHK 604
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
E E N+ Y +I+G + +I+ L M R+GF D VT +V Y K GN
Sbjct: 267 EGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQ 326
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A E+ G P D +Y S++ +AG L+R +M + + Y +L+
Sbjct: 327 ALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLIN 386
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G+S G + A R+++ + +G P L+N + ++G+ ++A + M GL P
Sbjct: 387 GFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSP 446
Query: 344 SDKCVALILSACEKENQLNRALE 366
+ I++ + +L+RA +
Sbjct: 447 DVVSYSTIIAGFCRYQELDRAFQ 469
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 98/253 (38%), Gaps = 2/253 (0%)
Query: 154 LQVAELALLEESFEANIRDYTKIIHGYGK-KMQIQNAENTLLAMKRRGFICDQVTLTVMV 212
L + +LA L F + Y I+ + + + AE M G + + +++
Sbjct: 152 LNIVDLAKLN-GFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILI 210
Query: 213 VMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY 272
+ AGNL+M FEE++ + +Y +++ AY + +D LLR M + +
Sbjct: 211 RGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLE 270
Query: 273 VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTA 332
Y ++ G G E V + G PD L+N Y G +A
Sbjct: 271 PNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVL 330
Query: 333 FQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKR 392
M + GL P +++ K LNRA+EF + G +L F +
Sbjct: 331 HSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQ 390
Query: 393 LGVVEEVEHVLRE 405
G ++E + E
Sbjct: 391 KGFMDEAYRIWDE 403
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 35/240 (14%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +++GY K A M R G D VT T ++ KAGNL A E F+++
Sbjct: 311 YNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMH 370
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ G + +Y S++ + + G +D + EM Y ALL G+ ++G E
Sbjct: 371 VRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRME 430
Query: 293 GAQRVFEAIQFAGITPDARMCALLI----------NAYQM------AGQSQKAYT----- 331
A + ++ G++PD + +I A+QM G S A T
Sbjct: 431 EAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLI 490
Query: 332 --------------AFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
FQ M L P + +++ KE LN AL ++ + GF+
Sbjct: 491 QGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFL 550
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 106/263 (40%), Gaps = 11/263 (4%)
Query: 119 NLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHP-LYLQVAELALLEESFEANIRDYTKII 177
N+ DL A FM P + A+L + P ++ + ++ N+ Y +I
Sbjct: 153 NIVDL-AKLNGFM-PGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILI 210
Query: 178 HGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG-- 235
G+ ++ M+R + + VT ++ Y K LK +E F+ ++ +G
Sbjct: 211 RGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCK---LKRIDEAFKLLRSMGLE 267
Query: 236 --EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEG 293
EP + +Y ++ R G ++ +L EMD + Y L+ GY GN
Sbjct: 268 GLEP-NLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQ 326
Query: 294 AQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILS 353
A + + G+ PD LIN AG +A F M GL P+ +++
Sbjct: 327 ALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLIN 386
Query: 354 ACEKENQLNRALEFLIDLERDGF 376
++ ++ A ++ R GF
Sbjct: 387 GFSQKGFMDEAYRIWDEMIRSGF 409
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 82/202 (40%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I+G+ +K + A M R GF VT ++ + +G ++ A ++
Sbjct: 381 YTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGME 440
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D SY +++ + R LDR + EM + V + Y +L++G
Sbjct: 441 GKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLN 500
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +F+ + + PD LIN Y G +A M K G P +++
Sbjct: 501 EACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLI 560
Query: 353 SACEKENQLNRALEFLIDLERD 374
+ K+ + A L+ L D
Sbjct: 561 NGLNKQARTREAKRLLLKLFYD 582
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/309 (19%), Positives = 124/309 (40%), Gaps = 35/309 (11%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRD 172
+SP+ + S ++A + R+ + RA + AE+ +E+ +
Sbjct: 444 LSPDVVSYSTIIAGFCRYQELDRA----------------FQMNAEM--VEKGVSPDAIT 485
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I G ++ ++ A + M + + D+ T T ++ Y K G+L A +E+
Sbjct: 486 YSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMI 545
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK------------- 279
G D +Y ++ + + LL ++ E Y
Sbjct: 546 KKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKS 605
Query: 280 --ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
AL++G+ M G A +VFE++ P+ + ++I+ + G KA+ ++ M
Sbjct: 606 VVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMV 665
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLI-DLERDGFMVGKEASCTLAAWFKRLGVV 396
G P + ++ A E ++ L +I D+ R + E S L + G +
Sbjct: 666 DFGFIPHTVTIIALVKALYSEG-MDEQLNLVIRDILRSCKLSDAELSKALVQINHKEGNI 724
Query: 397 EEVEHVLRE 405
+ V ++L E
Sbjct: 725 DAVFNLLTE 733
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/169 (20%), Positives = 71/169 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ F I Y +++G+ +++ A L M+ +G D V+ + ++ + +
Sbjct: 404 MIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQE 463
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A + E+ G D +Y S++ L+ L +EM + + Y +
Sbjct: 464 LDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTS 523
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
L+ GY G+ A + + + G PD +LIN ++++A
Sbjct: 524 LINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREA 572
>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
Length = 1595
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 92/210 (43%)
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL 221
+ N YT +IHG+ + ++ A + L+ M RG D VT ++ AG +
Sbjct: 1145 IRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKV 1204
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
A E++ D Y ++ + ML + +L EM + V VY L
Sbjct: 1205 SEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATL 1264
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+ G+ + N A+++FE ++ G+ PD C +I Y G +A NMRK G
Sbjct: 1265 IDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGC 1324
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDL 371
P + ++S K+ LN AL +L D+
Sbjct: 1325 IPDEFTYTTVISGYAKQGNLNGALRWLCDM 1354
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 86/204 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+ E ++ Y +I G KK + A+N L M + D+ ++ + ++ N
Sbjct: 1214 MTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSEN 1273
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A + FE ++ G D S +M+ Y + GM+ + + M Y
Sbjct: 1274 LGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTT 1333
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ GY+ GN GA R + P+ + LIN Y G + A F NM+
Sbjct: 1334 VISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEA 1393
Query: 341 LEPSDKCVALILSACEKENQLNRA 364
L P+ +++ + K++++ RA
Sbjct: 1394 LSPNVVTYTILIGSLFKKDKVLRA 1417
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 81/205 (39%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
F + Y +I+ GKK ++ + L M++RGF + ++ +
Sbjct: 1042 NGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQ 1101
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A +++ G D ++ +++ G + + E LRE +E+ Y L+
Sbjct: 1102 AMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIH 1161
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G+ M G A + + G TPD LI+ +AG+ +A + M + + P
Sbjct: 1162 GFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFP 1221
Query: 344 SDKCVALILSACEKENQLNRALEFL 368
+++S K+ L A L
Sbjct: 1222 DVNIYNVLISGLCKKRMLPAAKNIL 1246
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 54/126 (42%)
Query: 243 YGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQ 302
Y ++ Y R G + RG +LL EM+ Y +L+ G+ E +F ++
Sbjct: 1016 YNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMR 1075
Query: 303 FAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLN 362
G +P+ ++ +I+A + +A + M +G +P +++ E +
Sbjct: 1076 KRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVR 1135
Query: 363 RALEFL 368
+A FL
Sbjct: 1136 KAEHFL 1141
Score = 41.2 bits (95), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 88/226 (38%), Gaps = 19/226 (8%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I +I GY + + A + M++ G I D+ T T ++ Y+K GNL A
Sbjct: 1292 DIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWL 1351
Query: 229 -EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
+ IK +P + +Y S++ Y + G D E L M A+ + Y L+
Sbjct: 1352 CDMIKRKCKP-NVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFK 1410
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAG----QSQKAYTAFQNMRKAGLEP 343
A FE + +P+ L+N S T+ + + A L
Sbjct: 1411 KDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVV 1470
Query: 344 SDKCV------------ALILSACEKENQLNRALEFLIDLERDGFM 377
K V A+I S C + N L AL+F + + G++
Sbjct: 1471 FKKLVFDIGDPRNSAYNAIIFSLC-RHNMLREALDFKNRMAKKGYV 1515
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 89/199 (44%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F+ N+ Y IIHGY + I+ A L AM+ +G D T ++ K G L+ A
Sbjct: 280 FKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEAS 339
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F+++ +G + +Y +++ Y G L+R EM + + Y L+
Sbjct: 340 GLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHAL 399
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
M G A + + ++ GI PDA +LIN Y G ++KA+ M G+EP+
Sbjct: 400 FMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTH 459
Query: 346 KCVALILSACEKENQLNRA 364
++ + N++ A
Sbjct: 460 VTYTSLIYVLSRRNRMKEA 478
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 79/172 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+GY + + A + M +G VT T ++ + S+ +K A++ FE+I
Sbjct: 427 YNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKIL 486
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D + +MV + G ++R +LL+EMD + V + L++G G E
Sbjct: 487 DQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVE 546
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A+ + + ++ GI PD LI+ Y G + A+ M G P+
Sbjct: 547 EARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPT 598
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 7/209 (3%)
Query: 137 DWLAVLKQLKLMEHP--LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLL 194
D L++ +L ME LY ++ L + + NI +++ K+ +++ A +
Sbjct: 219 DMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNI-----MVNVLCKEGKLKKAREFIG 273
Query: 195 AMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG 254
M+ GF + V+ ++ YS GN++ A + +++ G D +YGS++ + G
Sbjct: 274 FMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEG 333
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
L+ L +M + + Y L+ GY G+ E A + + GI P
Sbjct: 334 RLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYN 393
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
LL++A M G+ +A + MRK G+ P
Sbjct: 394 LLVHALFMEGRMGEADDMIKEMRKKGIIP 422
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 83/188 (44%)
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
T +MV + K G LK A E ++ LG + SY +++ Y G ++ +L M
Sbjct: 251 TFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAM 310
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
+ + S Y +L+ G G E A +F+ + G+ P+A LI+ Y G
Sbjct: 311 RVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDL 370
Query: 327 QKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
++A++ M K G+ PS L++ A E ++ A + + ++ + G + L
Sbjct: 371 ERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNIL 430
Query: 387 AAWFKRLG 394
+ R G
Sbjct: 431 INGYSRCG 438
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 80/182 (43%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
MK +G + T M+ ++ K ++MA + E+ L ++ MV + G
Sbjct: 205 MKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGK 264
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
L + + M+ Y ++ GYS GN EGA+R+ +A++ GI PD+
Sbjct: 265 LKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGS 324
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
LI+ G+ ++A F M + GL P+ ++ + L RA + ++ + G
Sbjct: 325 LISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG 384
Query: 376 FM 377
M
Sbjct: 385 IM 386
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 110/254 (43%), Gaps = 5/254 (1%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
L+ ++ E+ L+ N Y +I GY K ++ A + M ++G + T ++
Sbjct: 341 LFDKMVEIGLV-----PNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLL 395
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
V G + A++ +E++ G D +Y ++ Y R G + L EM ++ +
Sbjct: 396 VHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGI 455
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
Y +L+ S + A +FE I G++PD M +++ + G ++A+
Sbjct: 456 EPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFM 515
Query: 332 AFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFK 391
+ M + + P + ++ +E ++ A L +++R G + TL + +
Sbjct: 516 LLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYG 575
Query: 392 RLGVVEEVEHVLRE 405
R G +++ V E
Sbjct: 576 RRGDIKDAFRVRDE 589
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/149 (20%), Positives = 65/149 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L++ ++ + ++ G+ ++ A L M R+ D+VT ++ + G
Sbjct: 485 ILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGK 544
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ A +E+K G D SY +++ Y R G + + EM + Y A
Sbjct: 545 VEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNA 604
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPD 309
L++ N + A+ + + + GI+PD
Sbjct: 605 LIKCLCKNQEGDLAEELLKEMVNKGISPD 633
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 53/112 (47%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+ ++ G ++ +++ A L MKRRG D ++ ++ Y + G++K A +E+
Sbjct: 532 FNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEML 591
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
+G +Y +++ + D E LL+EM + + Y +L+ G
Sbjct: 592 SIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEG 643
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 104/243 (42%), Gaps = 35/243 (14%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
LLE+ F AN+ +IHG K +Q A L M RGF+ D++T ++ K G
Sbjct: 549 LLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGK 608
Query: 221 LK-------------MAEETF----------------EEIKLLGEPLDKR------SYGS 245
++ + +TF E + L E + +YG
Sbjct: 609 VEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGV 668
Query: 246 MVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAG 305
M+ Y +A ++ GE L E+ Q + + S VY L+R Y NGN+ A ++ + ++ G
Sbjct: 669 MIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKG 728
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
I P + LI+ G+ + A MRK GL P+ C ++ K Q+++ +
Sbjct: 729 IPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVV 788
Query: 366 EFL 368
L
Sbjct: 789 NVL 791
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 98/238 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++++ E + Y +IHG + ++ A N K R + + T VM+ Y KA
Sbjct: 619 MVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADK 678
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ E+ F E+ L+ Y +++ AY R G L +M ++ + + Y +
Sbjct: 679 IEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSS 738
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G G E A+ + + ++ G+ P+ LI Y GQ K Q M
Sbjct: 739 LIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYD 798
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
+ P+ +++ K + A + L ++ G + L F + G +EE
Sbjct: 799 IHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEE 856
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/238 (18%), Positives = 97/238 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++++ A + Y+ +I+G K + A + L +GF ++V ++ Y K GN
Sbjct: 374 MVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGN 433
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A ++ G + + S++ + + G +++ E +L EM ++ + +
Sbjct: 434 LGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTT 493
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ MN E A R + + P+ + L+ G+ A + + + G
Sbjct: 494 IIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKG 553
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
+ ++ K + A+ L + GF++ K TL + + G VEE
Sbjct: 554 FGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEE 611
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+E N+ YT +I GY K Q+ N L M +++T TVM+ YSK+G++K
Sbjct: 761 KEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMK 820
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVL 262
A + E+ G D +Y + + + G ++ G++L
Sbjct: 821 TAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGKLL 860
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/288 (18%), Positives = 112/288 (38%), Gaps = 39/288 (13%)
Query: 157 AELALLEESFEANIRD----YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMV 212
+ L L E N+R T ++ G K+ + +A + +GF + VT ++
Sbjct: 506 SALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALI 565
Query: 213 VMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY 272
K GN++ A +++ G LDK +Y +++ + G ++ G L EM Q +
Sbjct: 566 HGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIE 625
Query: 273 VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA--------- 323
+ Y L+ G G + A ++ + + P+ ++I+ Y A
Sbjct: 626 PDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKL 685
Query: 324 --------------------------GQSQKAYTAFQNMRKAGLEPSDKCVALILSACEK 357
G + +A+ +MR G+ P+ + ++
Sbjct: 686 FTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCN 745
Query: 358 ENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A + ++ ++G + L + +LG +++V +VL+E
Sbjct: 746 IGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQE 793
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 80/213 (37%)
Query: 198 RRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLD 257
R+G D + + + K G ++ A + F +++ LG + +Y +++ + G LD
Sbjct: 306 RQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLD 365
Query: 258 RGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
+M V Y L+ G A V + G TP+ + LI
Sbjct: 366 EAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLI 425
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
+ Y G A +M G+ P+ + I+ K Q+ +A L ++ GF
Sbjct: 426 DGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFS 485
Query: 378 VGKEASCTLAAWFKRLGVVEEVEHVLREYGLRE 410
+ A T+ W E LRE LR
Sbjct: 486 INPGAFTTIIHWLCMNSRFESALRFLREMLLRN 518
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/237 (18%), Positives = 94/237 (39%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +IHG K + A M + G +T +V++ K A
Sbjct: 347 NVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVL 406
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E G ++ Y +++ Y + G L + +M ++ + S ++++G+
Sbjct: 407 KETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKI 466
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G E A+ + E + G + + +I+ M + + A + M + P+D +
Sbjct: 467 GQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLL 526
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ KE + + A+E L GF + L + G ++E +L++
Sbjct: 527 TTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKK 583
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 57/127 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +IHG ++++A+ + M++ G + + V T ++ Y K G + +E+
Sbjct: 736 YSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMS 795
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+K +Y M+ Y ++G + LL EM + + + Y L G+ G E
Sbjct: 796 SYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIE 855
Query: 293 GAQRVFE 299
+ + E
Sbjct: 856 EGKLLAE 862
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/207 (19%), Positives = 82/207 (39%)
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL 221
+ + ++ ++ I+ + K ++++A M++ G + VT ++ K GNL
Sbjct: 305 MRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNL 364
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
A E++ G +Y ++ ++ + +L+E + VY L
Sbjct: 365 DEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTL 424
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+ GY GN A R+ + GI P++ +I + GQ ++A + M G
Sbjct: 425 IDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGF 484
Query: 342 EPSDKCVALILSACEKENQLNRALEFL 368
+ I+ ++ AL FL
Sbjct: 485 SINPGAFTTIIHWLCMNSRFESALRFL 511
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 61/143 (42%), Gaps = 12/143 (8%)
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
L G+P ++ + + M D EV + V + VY R N
Sbjct: 213 LFGDPKNRH-------IEIASAMADLNEVGESGVAVAAVDLLIHVYCTQFR----NVGFR 261
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A VF + G+ P + C L+++ A + +K+Y F+ MR+ G+ P + +
Sbjct: 262 NAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAI 320
Query: 353 SACEKENQLNRALEFLIDLERDG 375
+A K ++ A++ D+E+ G
Sbjct: 321 NAFCKGGKVEDAIQLFFDMEKLG 343
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 109/245 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E ++ Y +++G + + +A+ M RG D TLT ++ Y K GN
Sbjct: 425 MVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGN 484
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A FE + L D +Y +++ + + G +++ + L +M ++E++ +
Sbjct: 485 MTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSI 544
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G+ G A R+++ ++ GI P C +I Y AG KA M G
Sbjct: 545 LINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEG 604
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+ P ++++ KE +RA + ++E G + + F R G ++E E
Sbjct: 605 VPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAE 664
Query: 401 HVLRE 405
VL +
Sbjct: 665 MVLHK 669
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 78/174 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
++ +I+G+ + A MK +G VT ++ Y +AGNL A + +
Sbjct: 542 FSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMI 601
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G P D +Y +++ ++V+ DR L+ M+ + + Y A+L G+S +G +
Sbjct: 602 SEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQ 661
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
A+ V + GI PD LIN Y ++A+ M + G P DK
Sbjct: 662 EAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPDDK 715
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 88/198 (44%), Gaps = 8/198 (4%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSK--- 217
+L+ ++ ++ I+ + + ++ A MK G + D V T+++ Y +
Sbjct: 355 MLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDD 414
Query: 218 -AGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
+G LKM E E G +D +Y +++ R MLD + L +EM + V+
Sbjct: 415 VSGALKMRNEMVER----GCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFY 470
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
L+ GY +GN A +FE + + PD L++ + G+ +KA + +M
Sbjct: 471 TLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDM 530
Query: 337 RKAGLEPSDKCVALILSA 354
+ PS +++++
Sbjct: 531 ISREIFPSYISFSILING 548
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 96/233 (41%), Gaps = 3/233 (1%)
Query: 182 KKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKR 241
+K + AE M +RG + D ++ + +V ++S+ G L A FE++K +G D
Sbjct: 341 RKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTV 400
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI 301
Y ++ Y R + + EM + + Y LL G + A +F+ +
Sbjct: 401 IYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEM 460
Query: 302 QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQL 361
G+ PD LI+ Y G KA + F+ M L+P ++ K ++
Sbjct: 461 VERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEM 520
Query: 362 NRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV---LREYGLRET 411
+A E D+ + L F LG+V E + ++E G++ T
Sbjct: 521 EKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPT 573
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 76/188 (40%), Gaps = 1/188 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+ +I Y + +++ +++RGF ++ K G + +A + +E+
Sbjct: 157 FDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFV 216
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G ++ + MV A + G LD V L EM+ + VY Y L+ Y G
Sbjct: 217 KSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVS 276
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV-ALI 351
A + + + G+ P LIN G ++A M GL P+ ++
Sbjct: 277 EAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPML 336
Query: 352 LSACEKEN 359
+ +C KE+
Sbjct: 337 VESCRKED 344
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 78/181 (43%), Gaps = 4/181 (2%)
Query: 140 AVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR 199
A+ K KL +YL E E+ A++ Y +++ Y ++ + A + M +
Sbjct: 233 ALCKDGKLDNVGVYLSEME----EKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGK 288
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G T ++ K G+ + A+ +E+ +G + ++ M++ R +
Sbjct: 289 GLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEA 348
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
E + EM + V + +++ +S NG A FE ++ G+ PD + +LIN
Sbjct: 349 ERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILING 408
Query: 320 Y 320
Y
Sbjct: 409 Y 409
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 89/199 (44%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F+ N+ Y IIHGY + I+ A L AM+ +G D T ++ K G L+ A
Sbjct: 258 FKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEAS 317
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F+++ +G + +Y +++ Y G L+R EM + + Y L+
Sbjct: 318 GLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHAL 377
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
M G A + + ++ GI PDA +LIN Y G ++KA+ M G+EP+
Sbjct: 378 FMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTH 437
Query: 346 KCVALILSACEKENQLNRA 364
++ + N++ A
Sbjct: 438 VTYTSLIYVLSRRNRMKEA 456
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 79/172 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+GY + + A + M +G VT T ++ + S+ +K A++ FE+I
Sbjct: 405 YNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKIL 464
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D + +MV + G ++R +LL+EMD + V + L++G G E
Sbjct: 465 DQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVE 524
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A+ + + ++ GI PD LI+ Y G + A+ M G P+
Sbjct: 525 EARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPT 576
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 83/188 (44%)
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
T +MV + K G LK A E ++ LG + SY +++ Y G ++ +L M
Sbjct: 229 TFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAM 288
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
+ + S Y +L+ G G E A +F+ + G+ P+A LI+ Y G
Sbjct: 289 RVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDL 348
Query: 327 QKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
++A++ M K G+ PS L++ A E ++ A + + ++ + G + L
Sbjct: 349 ERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNIL 408
Query: 387 AAWFKRLG 394
+ R G
Sbjct: 409 INGYSRCG 416
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 7/209 (3%)
Query: 137 DWLAVLKQLKLMEHP--LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLL 194
D L++ +L ME LY ++ L + + NI +++ K+ +++ A +
Sbjct: 197 DMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNI-----MVNVLCKEGKLKKAREFIG 251
Query: 195 AMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG 254
M+ GF + V+ ++ YS GN++ A + +++ G D +YGS++ + G
Sbjct: 252 FMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEG 311
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
L+ L +M + + Y L+ GY G+ E A + + GI P
Sbjct: 312 RLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYN 371
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
LL++A M G+ +A + MRK G+ P
Sbjct: 372 LLVHALFMEGRMGEADDMIKEMRKKGIIP 400
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 80/182 (43%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
MK +G + T M+ ++ K ++MA + E+ L ++ MV + G
Sbjct: 183 MKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGK 242
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
L + + M+ Y ++ GYS GN EGA+R+ +A++ GI PD+
Sbjct: 243 LKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGS 302
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
LI+ G+ ++A F M + GL P+ ++ + L RA + ++ + G
Sbjct: 303 LISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG 362
Query: 376 FM 377
M
Sbjct: 363 IM 364
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 110/254 (43%), Gaps = 5/254 (1%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
L+ ++ E+ L+ N Y +I GY K ++ A + M ++G + T ++
Sbjct: 319 LFDKMVEIGLV-----PNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLL 373
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
V G + A++ +E++ G D +Y ++ Y R G + L EM ++ +
Sbjct: 374 VHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGI 433
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
Y +L+ S + A +FE I G++PD M +++ + G ++A+
Sbjct: 434 EPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFM 493
Query: 332 AFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFK 391
+ M + + P + ++ +E ++ A L +++R G + TL + +
Sbjct: 494 LLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYG 553
Query: 392 RLGVVEEVEHVLRE 405
R G +++ V E
Sbjct: 554 RRGDIKDAFRVRDE 567
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/149 (20%), Positives = 65/149 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L++ ++ + ++ G+ ++ A L M R+ D+VT ++ + G
Sbjct: 463 ILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGK 522
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ A +E+K G D SY +++ Y R G + + EM + Y A
Sbjct: 523 VEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNA 582
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPD 309
L++ N + A+ + + + GI+PD
Sbjct: 583 LIKCLCKNQEGDLAEELLKEMVNKGISPD 611
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 53/112 (47%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+ ++ G ++ +++ A L MKRRG D ++ ++ Y + G++K A +E+
Sbjct: 510 FNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEML 569
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
+G +Y +++ + D E LL+EM + + Y +L+ G
Sbjct: 570 SIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEG 621
>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
Length = 822
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 92/210 (43%)
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL 221
+ N YT +IHG+ + ++ A + L+ M RG D VT ++ AG +
Sbjct: 371 IRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKV 430
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
A E++ D Y ++ + ML + +L EM + V VY L
Sbjct: 431 SEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATL 490
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+ G+ + N A+++FE ++ G+ PD C +I Y G +A NMRK G
Sbjct: 491 IDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGC 550
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDL 371
P + ++S K+ LN AL +L D+
Sbjct: 551 IPDEFTYTTVISGYAKQGNLNGALRWLCDM 580
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 84/196 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y +I G KK + A+N L M + D+ ++ + ++ NL A + F
Sbjct: 448 DVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIF 507
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E ++ G D S +M+ Y + GM+ + + M Y ++ GY+
Sbjct: 508 EFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQ 567
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
GN GA R + P+ + LIN Y G + A F NM+ L P+
Sbjct: 568 GNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTY 627
Query: 349 ALILSACEKENQLNRA 364
+++ + K++++ RA
Sbjct: 628 TILIGSLFKKDKVLRA 643
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 98/249 (39%), Gaps = 3/249 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ F + Y +I+ GKK ++ + L M++RG + ++ K +
Sbjct: 268 KGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQ 327
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A +++ G D ++ +++ G + + E LRE +E+ Y L+
Sbjct: 328 AMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIH 387
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G+ M G A + + G TPD LI+ +AG+ +A + M + + P
Sbjct: 388 GFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFP 447
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKR---LGVVEEVE 400
+++S K++ L A L ++ + TL F R LG ++
Sbjct: 448 DVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIF 507
Query: 401 HVLREYGLR 409
+ G+R
Sbjct: 508 EFMEHKGVR 516
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 57/126 (45%)
Query: 243 YGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQ 302
Y ++ Y R G + RG +LL EM+A+ Y +L+ G+ E +F ++
Sbjct: 242 YNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMR 301
Query: 303 FAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLN 362
G++P+ ++ +I+A + +A + M +G +P +++ E +
Sbjct: 302 KRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVR 361
Query: 363 RALEFL 368
+A FL
Sbjct: 362 KAEHFL 367
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 93/243 (38%), Gaps = 19/243 (7%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I +I GY + + A + M++ G I D+ T T ++ Y+K GNL A
Sbjct: 518 DIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWL 577
Query: 229 -EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
+ IK +P + +Y S++ Y + G D E L M A+ + Y L+
Sbjct: 578 CDMIKRKCKP-NVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFK 636
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAG----QSQKAYTAFQNMRKAGLEP 343
A FE + +P+ L+N S T+ + + A L
Sbjct: 637 KDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVV 696
Query: 344 SDKCV------------ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFK 391
K V A+I S C + N L AL+F + + G++ +L F
Sbjct: 697 FKKLVFDIGDPRNSAYNAIIFSLC-RHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFC 755
Query: 392 RLG 394
+G
Sbjct: 756 SVG 758
Score = 38.1 bits (87), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 70/188 (37%), Gaps = 36/188 (19%)
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVL---LREM--------------- 266
++T + + L G + G++V AY AGML + + LRE
Sbjct: 118 DDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLK 177
Query: 267 ---------DAQEVY-------VGSEVYKA--LLRGYSMNGNSEGAQRVFEAIQFAGITP 308
DA+++Y G++ Y L+RG + G E ++ EA AG P
Sbjct: 178 LLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIP 237
Query: 309 DARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFL 368
+LI+ Y G + M G P+ +++ K+ L +
Sbjct: 238 HVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLF 297
Query: 369 IDLERDGF 376
+++ + G
Sbjct: 298 LEMRKRGL 305
>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 105/217 (48%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
A++++ + +I Y ++ K Q+ A + M + + + VT + M+ Y+K G
Sbjct: 321 AMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVG 380
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
L A F E+K LG LD+ SY +++ Y + G ++ + +EM+ + Y
Sbjct: 381 RLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYN 440
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
ALL GY + +RVFE ++ ++P+ + LI+ Y G ++A F+ ++A
Sbjct: 441 ALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQA 500
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
GL+ + ++ A K + ++ L ++ ++G
Sbjct: 501 GLKADVVLYSALIDALCKNGLVESSVTLLDEMTKEGI 537
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 80/176 (45%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y+ +I GY K ++ +A N MK G D+V+ ++ +Y+K G + A +
Sbjct: 365 NVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVC 424
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E++ G D +Y +++ Y + D + EM V Y L+ YS
Sbjct: 425 KEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKG 484
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
G + A VF + AG+ D + + LI+A G + + T M K G+ P+
Sbjct: 485 GLYKEAMEVFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMTKEGIRPN 540
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 98/239 (41%), Gaps = 1/239 (0%)
Query: 169 NIRDYTKIIHGYGKK-MQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
N+ Y +I GK ++ + M G D++T ++ + S+ G + A
Sbjct: 259 NLVTYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRL 318
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
F + G D +Y +++ A + G +D ++ EM + + Y ++ GY+
Sbjct: 319 FSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAK 378
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G + A +F ++F G+ D L++ Y G+ ++A + M AG+
Sbjct: 379 VGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVT 438
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREY 406
+L+ K+ + + +++R TL + + G+ +E V RE+
Sbjct: 439 YNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREF 497
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 3/131 (2%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y ++ GYGK+ + MKR + +T + ++ +YSK G K A E F
Sbjct: 435 DVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVF 494
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E K G D Y +++ A + G+++ LL EM + + Y +++ +
Sbjct: 495 REFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMTKEGIRPNVVTYNSIIDAF--- 551
Query: 289 GNSEGAQRVFE 299
G S AQ V +
Sbjct: 552 GRSASAQCVVD 562
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 92/245 (37%), Gaps = 1/245 (0%)
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG-N 220
L+E + + ++ +I YG+ A +MK G + + VT ++ K G
Sbjct: 217 LKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDACGKGGVE 276
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
K E F+ + G D+ ++ S++ R G+ + L M + + Y
Sbjct: 277 FKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNT 336
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL G + A + + I P+ + +I+ Y G+ A F M+ G
Sbjct: 337 LLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLG 396
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+ +LS K + +AL+ ++E G L A + + +EV
Sbjct: 397 VGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVR 456
Query: 401 HVLRE 405
V E
Sbjct: 457 RVFEE 461
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 118/263 (44%), Gaps = 7/263 (2%)
Query: 160 ALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
AL EE ++R Y+ +IHG K ++ MK +G D +++ +
Sbjct: 572 ALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGF 631
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
K+G + A + EE+K G +YGS++ + LD +L E ++ V +
Sbjct: 632 CKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNV 691
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
VY +L+ G+ G + A + E + G+TP+ L++A A + +A FQN
Sbjct: 692 VVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQN 751
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGV 395
M+ P++ +++++ K + N+A F ++++ G T+ + R+G
Sbjct: 752 MKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGN 811
Query: 396 VEEVEHVLREYGLRETYSKIPGS 418
V E + + + ++ IP S
Sbjct: 812 VLEAKDLFERF---KSSGGIPDS 831
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 104/246 (42%), Gaps = 5/246 (2%)
Query: 157 AELALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMV 212
A L+LL+E SF A++ Y I +GK ++ A +K +G + D VT T M+
Sbjct: 255 AALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMI 314
Query: 213 VMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY 272
+ KA + A E FEE+ +Y +M+M Y G + LL +
Sbjct: 315 GVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCI 374
Query: 273 VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTA 332
Y +L G E A R+ EA++ P+ +LI+ AG+ + A
Sbjct: 375 PSVIAYNCILTCLGRKGKVEEALRILEAMKMDA-APNLTSYNILIDMLCKAGELEAALKV 433
Query: 333 FQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKR 392
+M++AGL P+ V +++ K +L+ A + L+ C+L R
Sbjct: 434 QDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGR 493
Query: 393 LGVVEE 398
G V +
Sbjct: 494 HGKVND 499
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 90/201 (44%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ + N+ Y+ +I G+GK +I A L + ++G + T ++ KA +
Sbjct: 685 KAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDE 744
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F+ +K L P ++ +Y MV + ++ V +EM Q + + Y ++
Sbjct: 745 ALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMIS 804
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G + GN A+ +FE + +G PD+ +I A ++ AY F+ R G
Sbjct: 805 GLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKGCRI 864
Query: 344 SDKCVALILSACEKENQLNRA 364
K ++L A K + L +A
Sbjct: 865 YSKTCVVLLDALHKADCLEQA 885
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 101/233 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+ +I G G+ ++ +A M G + V T ++ + K G + + ++E+
Sbjct: 484 FCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMM 543
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D + + +AG +++G L E+ AQ + Y L+ G G S+
Sbjct: 544 HRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSK 603
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
++F ++ G+ D R ++I+ + +G+ KAY + M+ GL+P+ ++
Sbjct: 604 DTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVI 663
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
K ++L+ A + + + +L F ++G ++E +L E
Sbjct: 664 DGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEE 716
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 100/244 (40%), Gaps = 5/244 (2%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L+ N YT +I + K + ++ M RG D + L + KAG
Sbjct: 507 MLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGE 566
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ FEEIK G D RSY ++ V+ G L EM Q +++ + Y
Sbjct: 567 IEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNI 626
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G+ +G A ++ E ++ G+ P +I+ + +AY F+ +
Sbjct: 627 VIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKA 686
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEA-SCTLAAWFKRLGVVEEV 399
++ + + ++ K +++ A L +L + G +C L A K EE+
Sbjct: 687 VDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVK----AEEI 742
Query: 400 EHVL 403
+ L
Sbjct: 743 DEAL 746
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/237 (18%), Positives = 97/237 (40%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I K +++ A +MK G + +T+ +M+ KA L A F
Sbjct: 410 NLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIF 469
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ D ++ S++ R G ++ +L +M + VY +L+R +
Sbjct: 470 LGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKC 529
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G E ++++ + G +PD + ++ AG+ +K F+ ++ GL P +
Sbjct: 530 GRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSY 589
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++++ K + +++ G + A + F + G V + +L E
Sbjct: 590 SILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEE 646
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 56/130 (43%)
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
E Y ALL + N E +++ E + AG P C ++ ++ + + ++A+ +
Sbjct: 133 EAYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIET 192
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGV 395
MRK P+ ++ A ++ + L L ++ G+ V TL F R G
Sbjct: 193 MRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGR 252
Query: 396 VEEVEHVLRE 405
V+ +L E
Sbjct: 253 VDAALSLLDE 262
>gi|32488707|emb|CAE03450.1| OSJNBa0088H09.8 [Oryza sativa Japonica Group]
Length = 905
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 113/227 (49%), Gaps = 3/227 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +IHG +K ++Q A + L M G ++ T T+++ Y+ +G++ A E F +IK
Sbjct: 586 YNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIK 645
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G LD Y +++ A ++G + + REM Q++ + +Y L+ G++ G+
Sbjct: 646 ESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVW 705
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ + + ++ G+ P+ INA AG Q+A + M GL+P+ K ++
Sbjct: 706 EAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLI 765
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEAS--CTLAAWFKRLGVVE 397
+ + +RAL+ +++ G + EAS C + + R V+E
Sbjct: 766 KGWARVSLPDRALKCFEEMKLAG-LKPDEASYHCLVTSLLSRATVME 811
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 105/234 (44%), Gaps = 6/234 (2%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E + R++ +I Y K+ +A T M+ RG + T +V Y+ A +++ A
Sbjct: 294 EPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALS 353
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVR------AGMLDRGEVLLREMDAQEVYVGSEVYKA 280
EE+K G L +Y ++ + + +G ++R E L+REM+ + +VY +
Sbjct: 354 CVEEMKSEGLELTIVTYSILISGFAKINDSHQSGNMERAEELVREMEEDGIDAPIDVYHS 413
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ GY++ N VFE ++ G P L+N Y G+ KA + + M G
Sbjct: 414 MMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCG 473
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
++ ++K +++++ + A ++ R G + L F ++G
Sbjct: 474 IKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMG 527
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/256 (19%), Positives = 111/256 (43%), Gaps = 4/256 (1%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E F+ +I Y +++ Y K ++ A + M+ G + T ++++ + +
Sbjct: 434 LKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHD 493
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A FEE+ G D+ Y ++ A+ + G +DR +L +M + + + ++
Sbjct: 494 FANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRP 553
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ GY++ G+ + A + ++ +G P LI+ + Q+A + M AG
Sbjct: 554 IIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAG 613
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+ P++ +I+ + +A E+ ++ G + TL + G ++
Sbjct: 614 ITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSAL 673
Query: 401 HVLREYGLRETYSKIP 416
V RE ++ KIP
Sbjct: 674 AVTREM----SFQKIP 685
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 103/250 (41%), Gaps = 41/250 (16%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSK------AGN 220
E N +T ++H Y ++ A + + MK G VT ++++ ++K +GN
Sbjct: 329 EPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSHQSGN 388
Query: 221 LKMAEE-----------------------------------TFEEIKLLGEPLDKRSYGS 245
++ AEE FE +K G SYG
Sbjct: 389 MERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGC 448
Query: 246 MVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAG 305
++ YV+ G + + + +EM++ + ++ Y L+ G+ + A +FE + +G
Sbjct: 449 LLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSG 508
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
+ PD + LLI A+ G +A + M+K ++PS++ I+ + AL
Sbjct: 509 LQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSAL 568
Query: 366 EFLIDLERDG 375
+ L + R G
Sbjct: 569 DTLDLMRRSG 578
>gi|449444614|ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
gi|449528063|ref|XP_004171026.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
Length = 536
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 1/195 (0%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F N+ Y +I GY K + +A M++ G D VT +V + K G L+ A
Sbjct: 269 FSPNVASYNTLIAGYCNKGLLSSAMKLRSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEAS 328
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+ F E+K + +Y ++ Y +AG + G L EM +V Y AL+ G
Sbjct: 329 KLFGEMKGMSLSPTTVTYNILINGYSKAGNCEMGNRLFEEMSRFQVKADILTYNALILGL 388
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
G ++ A + + G+ P+A + LI + QS++A+ +++M K+ P D
Sbjct: 389 CKEGKTKKAAYLVRELDEKGLVPNASTFSALIYGQCVQKQSERAFQIYKSMIKSSFTPCD 448
Query: 346 KCVALILSA-CEKEN 359
+ ++LS CE E+
Sbjct: 449 QTFRMLLSTFCENED 463
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 79/183 (43%), Gaps = 2/183 (1%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M+R + TL +++ K G L A FEE+ +G + SY +++ Y G+
Sbjct: 229 MRRSRIYPNSYTLNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGYCNKGL 288
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
L L M+ V + L+ G+ G + A ++F ++ ++P +
Sbjct: 289 LSSAMKLRSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNI 348
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV-ALILSACEKENQLNRALEFLIDLERD 374
LIN Y AG + F+ M + ++ ALIL C KE + +A + +L+
Sbjct: 349 LINGYSKAGNCEMGNRLFEEMSRFQVKADILTYNALILGLC-KEGKTKKAAYLVRELDEK 407
Query: 375 GFM 377
G +
Sbjct: 408 GLV 410
>gi|356534408|ref|XP_003535747.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g35130-like [Glycine max]
Length = 357
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 106/238 (44%), Gaps = 6/238 (2%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y I+G K AE MK+ T T+++ +Y KAG MA F E+
Sbjct: 9 YNAYINGLMKGGNSDKAEEIFKRMKKDACKSTTETYTMLINLYGKAGKSFMALILFHEMT 68
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN---- 288
+ +Y ++V A+VR G+ ++ E + +M + Y AL+ Y +
Sbjct: 69 THKCKPNICTYTALVNAFVREGLCEKAEEVFEQMQEAGLEPDVYAYNALMETYKFSSPFS 128
Query: 289 --GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G GA +F +Q G PD +L++AY AG A F++M++ G+ P+ K
Sbjct: 129 RAGYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMK 188
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
++ SA K +N+ E L + + G + ++ + RLG ++E VLR
Sbjct: 189 SHMVLQSAYSKMGNVNKCEEILNQMCKSGLKLNTYVLKSMLNLYGRLGQFGKMEEVLR 246
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 79/208 (37%), Gaps = 9/208 (4%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E + Y ++ YGK +AE MKR G + V+ YSK GN+ EE
Sbjct: 149 EPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLQSAYSKMGNVNKCEE 208
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
++ G L+ SM+ Y R G + E +LR M+ Y L+ Y
Sbjct: 209 ILNQMCKSGLKLNTYVLKSMLNLYGRLGQFGKMEEVLRVMEKGSYVADISTYNILINRYG 268
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G E + F+ + G+ PD + AY K F+ A
Sbjct: 269 QAGXIERMEDFFQLLPSKGLKPDVVTWTSRMGAYSXKKLYLKCLEIFEETIDA------- 321
Query: 347 CVALILSACEKENQLNRALEFLIDLERD 374
++L+AC E+Q + + + +D
Sbjct: 322 --KVLLAACTNEDQTEQVTTVIRTMHKD 347
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 90/232 (38%), Gaps = 12/232 (5%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY------SKAGNLK 222
NI YT +++ + ++ + AE M+ G D ++ Y S+AG
Sbjct: 75 NICTYTALVNAFVREGLCEKAEEVFEQMQEAGLEPDVYAYNALMETYKFSSPFSRAGYPY 134
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A E F ++ +G D+ SY +V AY +AG D E + ++M + + + L
Sbjct: 135 GAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLQ 194
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
YS GN + + + +G+ + + ++N Y GQ K + M K
Sbjct: 195 SAYSKMGNVNKCEEILNQMCKSGLKLNTYVLKSMLNLYGRLGQFGKMEEVLRVMEKGSYV 254
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
++++ + + R +F L G + W R+G
Sbjct: 255 ADISTYNILINRYGQAGXIERMEDFFQLLPSKGL------KPDVVTWTSRMG 300
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 43/100 (43%)
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
VY A + G GNS+ A+ +F+ ++ +LIN Y AG+S A F M
Sbjct: 8 VYNAYINGLMKGGNSDKAEEIFKRMKKDACKSTTETYTMLINLYGKAGKSFMALILFHEM 67
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+P+ +++A +E +A E ++ G
Sbjct: 68 TTHKCKPNICTYTALVNAFVREGLCEKAEEVFEQMQEAGL 107
>gi|224141335|ref|XP_002324029.1| predicted protein [Populus trichocarpa]
gi|222867031|gb|EEF04162.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 97/202 (48%), Gaps = 4/202 (1%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
++ E N+ Y +I YGK ++ + A N + M+ RG + +T + ++ ++ KAG L
Sbjct: 345 KKDIEQNVVTYNTMIKVYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIISIWGKAGKLD 404
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A F++++ G +D+ Y +M++AY R+G++ + LL E+ + K L
Sbjct: 405 RAAMLFQKLRSSGVEIDQVLYQTMIVAYERSGLVAHAKRLLHELKHPDSIPRETAIKILA 464
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
R G E A VF AG D + +++ + + F+ MR AG
Sbjct: 465 RA----GRIEEATWVFRQAFDAGEVKDISVFGCMVDLFSRNRKPANVIEVFEKMRGAGYF 520
Query: 343 PSDKCVALILSACEKENQLNRA 364
P +AL+L+A K ++ +A
Sbjct: 521 PDSNVIALVLNAYGKLHEFEKA 542
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 95/233 (40%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+ +GK + A+ + M+ G + D V+ + ++ +Y + A F E+
Sbjct: 215 YNSMINVFGKAKLFREAKLLMKEMREVGVMPDTVSYSTLLSVYVENEKFVEALSVFAEMN 274
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
PLD + M+ Y + M + L M + Y LLR Y
Sbjct: 275 EAKCPLDLTTCNVMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGETELFG 334
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +F +Q I + +I Y + + +KA Q M+ G+EP+ + I+
Sbjct: 335 EAIHLFRLMQKKDIEQNVVTYNTMIKVYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 394
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
S K +L+RA L G + + T+ ++R G+V + +L E
Sbjct: 395 SIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERSGLVAHAKRLLHE 447
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 4/233 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ ++ Y + + A + M D T VM+ +Y + K A+ F ++
Sbjct: 250 YSTLLSVYVENEKFVEALSVFAEMNEAKCPLDLTTCNVMIDVYGQLDMAKEADRLFWSMR 309
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+G + SY +++ Y + L R M +++ Y +++ Y + E
Sbjct: 310 KMGIEPNVVSYNTLLRVYGETELFGEAIHLFRLMQKKDIEQNVVTYNTMIKVYGKSLEHE 369
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + +Q GI P+A + +I+ + AG+ +A FQ +R +G+E ++
Sbjct: 370 KATNLMQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMI 429
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
A E+ + A L +L+ + + A LA R G +EE V R+
Sbjct: 430 VAYERSGLVAHAKRLLHELKHPDSIPRETAIKILA----RAGRIEEATWVFRQ 478
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK + L M++ D V + ++ + K + A F +K
Sbjct: 145 YSTLITHFGKAGMFDASLFWLQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLK 204
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y SM+ + +A + ++L++EM V + Y LL Y N
Sbjct: 205 RSGIMPDLVAYNSMINVFGKAKLFREAKLLMKEMREVGVMPDTVSYSTLLSVYVENEKFV 264
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF + A D C ++I+ Y +++A F +MRK G+EP+
Sbjct: 265 EALSVFAEMNEAKCPLDLTTCNVMIDVYGQLDMAKEADRLFWSMRKMGIEPN 316
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 71/170 (41%), Gaps = 8/170 (4%)
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
+A A F+E++ D+ +Y +++ + +AGM D L++M+ V
Sbjct: 119 RAKQWDHAHGLFDEMRNRALAPDRYTYSTLITHFGKAGMFDASLFWLQQMEQDRVSGDLV 178
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
+Y L+ + A +F ++ +GI PD +IN + A ++A + M
Sbjct: 179 LYSNLIELSRKLCDYSKAISIFMRLKRSGIMPDLVAYNSMINVFGKAKLFREAKLLMKEM 238
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
R+ G+ P + +LS + + AL ++ EA C L
Sbjct: 239 REVGVMPDTVSYSTLLSVYVENEKFVEALSVFAEM--------NEAKCPL 280
>gi|90399139|emb|CAJ86163.1| H0913C04.4 [Oryza sativa Indica Group]
gi|125550286|gb|EAY96108.1| hypothetical protein OsI_17985 [Oryza sativa Indica Group]
Length = 900
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 113/227 (49%), Gaps = 3/227 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +IHG +K ++Q A + L M G ++ T T+++ Y+ +G++ A E F +IK
Sbjct: 581 YNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIK 640
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G LD Y +++ A ++G + + REM Q++ + +Y L+ G++ G+
Sbjct: 641 ESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVW 700
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ + + ++ G+ P+ INA AG Q+A + M GL+P+ K ++
Sbjct: 701 EAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLI 760
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEAS--CTLAAWFKRLGVVE 397
+ + +RAL+ +++ G + EAS C + + R V+E
Sbjct: 761 KGWARVSLPDRALKCFEEMKLAG-LKPDEASYHCLVTSLLSRATVME 806
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 132/292 (45%), Gaps = 3/292 (1%)
Query: 103 CKAFVKQIICVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALL 162
C+ F ++++ P+ N +++A+ R KP R ++ ++ + + +
Sbjct: 234 CREF-RRVVESRPD--NWQAVVSAFERIPKPSRREFGLMIVYYAKRGDKHHARATFENMR 290
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E N +T ++H Y ++ A + + MK G VT ++++ ++K + +
Sbjct: 291 ARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQ 350
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A+ F+E K L+ Y +++ A+ ++G ++R E L+ EM+ + +VY +++
Sbjct: 351 SADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVCEMEEDGIDAPIDVYHSMM 410
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
GY++ N VFE ++ G P L+N Y G+ KA + + M G++
Sbjct: 411 HGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIK 470
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
++K +++++ + A ++ R G + L F ++G
Sbjct: 471 HNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMG 522
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 90/203 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ IIH + + ++ AE + M+ G M+ Y+ N FE +K
Sbjct: 371 YSNIIHAHCQSGNMERAEELVCEMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLK 430
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G SYG ++ YV+ G + + + +EM++ + ++ Y L+ G+ +
Sbjct: 431 ECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFA 490
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +FE + +G+ PD + LLI A+ G +A + M+K ++PS++ I+
Sbjct: 491 NAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPII 550
Query: 353 SACEKENQLNRALEFLIDLERDG 375
+ AL+ L + R G
Sbjct: 551 EGYAVAGDMKSALDTLDLMRRSG 573
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/256 (19%), Positives = 111/256 (43%), Gaps = 4/256 (1%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E F+ +I Y +++ Y K ++ A + M+ G + T ++++ + +
Sbjct: 429 LKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHD 488
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A FEE+ G D+ Y ++ A+ + G +DR +L +M + + + ++
Sbjct: 489 FANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRP 548
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ GY++ G+ + A + ++ +G P LI+ + Q+A + M AG
Sbjct: 549 IIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAG 608
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+ P++ +I+ + +A E+ ++ G + TL + G ++
Sbjct: 609 ITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSAL 668
Query: 401 HVLREYGLRETYSKIP 416
V RE ++ KIP
Sbjct: 669 AVTREM----SFQKIP 680
>gi|326527817|dbj|BAJ88981.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 491
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 125/277 (45%), Gaps = 6/277 (2%)
Query: 131 MKPRRADWLAVLKQLKLMEHPLYLQVAELALL---EESFEANIRDYTKIIHGYGKKMQIQ 187
++P A + A+L+ L H L++A+ LL ++ N R Y ++ Y + +++
Sbjct: 118 LRPDAAHYNALLEGLLARAH---LRLADRLLLQMADDGVARNRRTYMLLLDAYARAGRLE 174
Query: 188 NAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMV 247
++ L MKR G D + +V +Y +G K A + E++ +G LD + Y ++
Sbjct: 175 DSWWVLGEMKRWGIRLDTAGYSTLVRLYRDSGMWKKATDLIMEMQEVGVELDVKIYNGLI 234
Query: 248 MAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGIT 307
+ + G L + +M Q + E + AL+R + GN + A R A+Q G+
Sbjct: 235 DTFGKYGQLADARKMFEKMRGQGIKPDIETWNALIRWHCRVGNMKRALRFLAAMQEEGMY 294
Query: 308 PDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
PD ++ +IN G+ + F MR G + S A+++ + A E
Sbjct: 295 PDPKIFITIINKLGEQGKWDELKELFDKMRNRGFKESGAIYAVLVDIYGQYGHFRDAQEC 354
Query: 368 LIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
+ L+ + + C LA + + G+ E+ VL+
Sbjct: 355 VAALKAENLQLSPSIFCVLANAYAQQGLCEQTVSVLQ 391
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 105/255 (41%), Gaps = 35/255 (13%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E E +++ Y +I +GK Q+ +A M+ +G D T ++ + + GN+K
Sbjct: 220 EVGVELDVKIYNGLIDTFGKYGQLADARKMFEKMRGQGIKPDIETWNALIRWHCRVGNMK 279
Query: 223 --------MAEE--------------------TFEEIKLLGEPLDKRS-------YGSMV 247
M EE ++E+K L + + R Y +V
Sbjct: 280 RALRFLAAMQEEGMYPDPKIFITIINKLGEQGKWDELKELFDKMRNRGFKESGAIYAVLV 339
Query: 248 MAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGIT 307
Y + G + + + A+ + + ++ L Y+ G E V + ++ GI
Sbjct: 340 DIYGQYGHFRDAQECVAALKAENLQLSPSIFCVLANAYAQQGLCEQTVSVLQLMEAEGIE 399
Query: 308 PDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
P+ M LLINA+ AG+ +A FQ+++ +G+ P ++ A + + + E
Sbjct: 400 PNLVMLNLLINAFSTAGRHLEAQAVFQHIKDSGMSPDVVTYTTLMKAFMRVKRYEKVSEV 459
Query: 368 LIDLERDGFMVGKEA 382
++ER G ++A
Sbjct: 460 YSEMERAGCTPDRKA 474
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 90/203 (44%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
A+ EE + + + II+ G++ + + M+ RGF V+V +Y + G
Sbjct: 287 AMQEEGMYPDPKIFITIINKLGEQGKWDELKELFDKMRNRGFKESGAIYAVLVDIYGQYG 346
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ + A+E +K L + + AY + G+ ++ +L+ M+A+ + +
Sbjct: 347 HFRDAQECVAALKAENLQLSPSIFCVLANAYAQQGLCEQTVSVLQLMEAEGIEPNLVMLN 406
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ +S G AQ VF+ I+ +G++PD L+ A+ + +K + M +A
Sbjct: 407 LLINAFSTAGRHLEAQAVFQHIKDSGMSPDVVTYTTLMKAFMRVKRYEKVSEVYSEMERA 466
Query: 340 GLEPSDKCVALILSACEKENQLN 362
G P K ++ A Q+
Sbjct: 467 GCTPDRKAREMLHDASVTMEQMG 489
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 34/204 (16%), Positives = 86/204 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ ++ Y + A + ++ M+ G D ++ + K G L A + FE+++
Sbjct: 195 YSTLVRLYRDSGMWKKATDLIMEMQEVGVELDVKIYNGLIDTFGKYGQLADARKMFEKMR 254
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D ++ +++ + R G + R L M + +Y +++ ++ G +
Sbjct: 255 GQGIKPDIETWNALIRWHCRVGNMKRALRFLAAMQEEGMYPDPKIFITIINKLGEQGKWD 314
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
+ +F+ ++ G + A+L++ Y G + A ++ L+ S ++
Sbjct: 315 ELKELFDKMRNRGFKESGAIYAVLVDIYGQYGHFRDAQECVAALKAENLQLSPSIFCVLA 374
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
+A ++ + + L +E +G
Sbjct: 375 NAYAQQGLCEQTVSVLQLMEAEGI 398
>gi|326503836|dbj|BAK02704.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 399
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 108/231 (46%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y + G K + A MKR + T T+M+ +Y K+ A + F+E++
Sbjct: 52 YNAYLDGLLKARCAEKAVEVYQRMKRERCRTNTETYTLMINVYGKSKQPMSAMKVFKEMQ 111
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+G + +Y ++V A+ R G+ ++ E + EM Y AL+ YS G +
Sbjct: 112 SIGCKANICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGFPQ 171
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +F +Q G PD +L++AY AG ++A F+++++ G+ P+ K L+L
Sbjct: 172 AASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHREAEAVFESLKRQGMAPTMKSHMLLL 231
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+A + + R E + L + G A + + R G ++++E +L
Sbjct: 232 AAHARSGNVARCEEVMAQLHKSGLAPDTIALNAMLNAYGRAGRLDDMERLL 282
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 97/228 (42%), Gaps = 7/228 (3%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
+ANI YT +++ + ++ + AE M++ G D ++ YS+AG + A E
Sbjct: 116 KANICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGFPQAASE 175
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
F ++ +G D+ SY +V AY RAG+ E + + Q + + + LL ++
Sbjct: 176 IFSLMQHMGCEPDRASYNILVDAYGRAGLHREAEAVFESLKRQGMAPTMKSHMLLLAAHA 235
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
+GN + V + +G+ PD ++NAY AG+ M + G
Sbjct: 236 RSGNVARCEEVMAQLHKSGLAPDTIALNAMLNAYGRAGRLDDMERLLAAMERRGTRDVGT 295
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
+ ++A + L R LER G + + W R+G
Sbjct: 296 -YNVAVNAYGRAGYLERMEAAFASLERRGL------AADVVTWTSRMG 336
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 91/205 (44%), Gaps = 3/205 (1%)
Query: 172 DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEI 231
Y ++ YG+ + AE ++KR+G + +++ ++++GN+ EE ++
Sbjct: 191 SYNILVDAYGRAGLHREAEAVFESLKRQGMAPTMKSHMLLLAAHARSGNVARCEEVMAQL 250
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY-VGSEVYKALLRGYSMNGN 290
G D + +M+ AY RAG LD E LL M+ + VG+ Y + Y G
Sbjct: 251 HKSGLAPDTIALNAMLNAYGRAGRLDDMERLLAAMERRGTRDVGT--YNVAVNAYGRAGY 308
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
E + F +++ G+ D + AY + ++ F+ M AG P +
Sbjct: 309 LERMEAAFASLERRGLAADVVTWTSRMGAYARKKEYRRCLEIFEEMVDAGCYPDAGTAKV 368
Query: 351 ILSACEKENQLNRALEFLIDLERDG 375
+++AC E Q+ + + + ++
Sbjct: 369 LVAACSDERQVEQVTAIVRSMHKEA 393
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 81/197 (41%)
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
T +++ Y AG+L AE E++ G P Y + + ++A ++ + + M
Sbjct: 16 TYALLLRAYCTAGSLHRAEGVISEMREHGIPPSATVYNAYLDGLLKARCAEKAVEVYQRM 75
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
+ +E Y ++ Y + A +VF+ +Q G + L+NA+ G
Sbjct: 76 KRERCRTNTETYTLMINVYGKSKQPMSAMKVFKEMQSIGCKANICTYTALVNAFAREGLC 135
Query: 327 QKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
+KA F+ M++AG EP ++ A + A E ++ G + + L
Sbjct: 136 EKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGFPQAASEIFSLMQHMGCEPDRASYNIL 195
Query: 387 AAWFKRLGVVEEVEHVL 403
+ R G+ E E V
Sbjct: 196 VDAYGRAGLHREAEAVF 212
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 69/170 (40%), Gaps = 1/170 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ + ++ + + + E + + + G D + L M+ Y +AG L E
Sbjct: 223 TMKSHMLLLAAHARSGNVARCEEVMAQLHKSGLAPDTIALNAMLNAYGRAGRLDDMERLL 282
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ G D +Y V AY RAG L+R E ++ + + + + + Y+
Sbjct: 283 AAMERRG-TRDVGTYNVAVNAYGRAGYLERMEAAFASLERRGLAADVVTWTSRMGAYARK 341
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
+FE + AG PDA +L+ A Q ++ ++M K
Sbjct: 342 KEYRRCLEIFEEMVDAGCYPDAGTAKVLVAACSDERQVEQVTAIVRSMHK 391
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 55/130 (42%)
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
+ Y LLR Y G+ A+ V ++ GI P A + ++ A ++KA +Q
Sbjct: 15 DTYALLLRAYCTAGSLHRAEGVISEMREHGIPPSATVYNAYLDGLLKARCAEKAVEVYQR 74
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGV 395
M++ + + L+++ K Q A++ +++ G L F R G+
Sbjct: 75 MKRERCRTNTETYTLMINVYGKSKQPMSAMKVFKEMQSIGCKANICTYTALVNAFAREGL 134
Query: 396 VEEVEHVLRE 405
E+ E V E
Sbjct: 135 CEKAEEVFEE 144
>gi|326487288|dbj|BAJ89628.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 461
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 125/277 (45%), Gaps = 6/277 (2%)
Query: 131 MKPRRADWLAVLKQLKLMEHPLYLQVAELALL---EESFEANIRDYTKIIHGYGKKMQIQ 187
++P A + A+L+ L H L++A+ LL ++ N R Y ++ Y + +++
Sbjct: 118 LRPDAAHYNALLEGLLARAH---LRLADRLLLQMADDGVARNRRTYMLLLDAYARAGRLE 174
Query: 188 NAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMV 247
++ L MKR G D + +V +Y +G K A + E++ +G LD + Y ++
Sbjct: 175 DSWWVLGEMKRWGIRLDTAGYSTLVRLYRDSGMWKKATDLIMEMQEVGVELDVKIYNGLI 234
Query: 248 MAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGIT 307
+ + G L + +M Q + E + AL+R + GN + A R A+Q G+
Sbjct: 235 DTFGKYGQLADARKMFEKMRGQGIKPDIETWNALIRWHCRVGNMKRALRFLAAMQEEGMY 294
Query: 308 PDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
PD ++ +IN G+ + F MR G + S A+++ + A E
Sbjct: 295 PDPKIFITIINRLGEQGKWDELKELFDKMRNRGFKESGAIYAVLVDIYGQYGHFRDAQEC 354
Query: 368 LIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
+ L+ + + C LA + + G+ E+ VL+
Sbjct: 355 VAALKAENLQLSPSIFCVLANAYAQQGLCEQTVSVLQ 391
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 90/217 (41%), Gaps = 35/217 (16%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E E +++ Y +I +GK Q+ +A M+ +G D T ++ + + GN+K
Sbjct: 220 EVGVELDVKIYNGLIDTFGKYGQLADARKMFEKMRGQGIKPDIETWNALIRWHCRVGNMK 279
Query: 223 --------MAEE--------------------TFEEIKLLGEPLDKRS-------YGSMV 247
M EE ++E+K L + + R Y +V
Sbjct: 280 RALRFLAAMQEEGMYPDPKIFITIINRLGEQGKWDELKELFDKMRNRGFKESGAIYAVLV 339
Query: 248 MAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGIT 307
Y + G + + + A+ + + ++ L Y+ G E V + ++ GI
Sbjct: 340 DIYGQYGHFRDAQECVAALKAENLQLSPSIFCVLANAYAQQGLCEQTVSVLQLMEAEGIE 399
Query: 308 PDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
P+ M LLINA+ AG+ +A FQ+++ +G+ P
Sbjct: 400 PNLVMLNLLINAFSTAGRHLEAQAVFQHIKDSGMSPD 436
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 34/204 (16%), Positives = 86/204 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ ++ Y + A + ++ M+ G D ++ + K G L A + FE+++
Sbjct: 195 YSTLVRLYRDSGMWKKATDLIMEMQEVGVELDVKIYNGLIDTFGKYGQLADARKMFEKMR 254
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D ++ +++ + R G + R L M + +Y +++ ++ G +
Sbjct: 255 GQGIKPDIETWNALIRWHCRVGNMKRALRFLAAMQEEGMYPDPKIFITIINRLGEQGKWD 314
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
+ +F+ ++ G + A+L++ Y G + A ++ L+ S ++
Sbjct: 315 ELKELFDKMRNRGFKESGAIYAVLVDIYGQYGHFRDAQECVAALKAENLQLSPSIFCVLA 374
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
+A ++ + + L +E +G
Sbjct: 375 NAYAQQGLCEQTVSVLQLMEAEGI 398
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 104/243 (42%), Gaps = 35/243 (14%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
LLE+ F AN+ +IHG K +Q A L M RGF+ D++T ++ K G
Sbjct: 482 LLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGK 541
Query: 221 LK-------------MAEETF----------------EEIKLLGEPLDKR------SYGS 245
++ + +TF E + L E + +YG
Sbjct: 542 VEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGV 601
Query: 246 MVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAG 305
M+ Y +A ++ GE L E+ Q + + S VY L+R Y NGN+ A ++ + ++ G
Sbjct: 602 MIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKG 661
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
I P + LI+ G+ + A MRK GL P+ C ++ K Q+++ +
Sbjct: 662 IPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVV 721
Query: 366 EFL 368
L
Sbjct: 722 NVL 724
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 98/238 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++++ E + Y +IHG + ++ A N K R + + T VM+ Y KA
Sbjct: 552 MVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADK 611
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ E+ F E+ L+ Y +++ AY R G L +M ++ + + Y +
Sbjct: 612 IEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSS 671
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G G E A+ + + ++ G+ P+ LI Y GQ K Q M
Sbjct: 672 LIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYD 731
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
+ P+ +++ K + A + L ++ G + L F + G +EE
Sbjct: 732 IHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEE 789
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 89/222 (40%), Gaps = 1/222 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I GY K +I+ E + + + V ++ Y + GN A +
Sbjct: 595 NVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLH 654
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++++ G P +Y S++ G ++ + L+ EM + + Y AL+ GY
Sbjct: 655 DDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKL 714
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + V + + I P+ ++I+ Y +G + A M G+ P
Sbjct: 715 GQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTY 774
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLA-AW 389
++ + KE ++ + + ++G + + TL W
Sbjct: 775 NVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGW 816
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/238 (18%), Positives = 97/238 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++++ A + Y+ +I+G K + A + L +GF ++V ++ Y K GN
Sbjct: 307 MVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGN 366
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A ++ G + + S++ + + G +++ E +L EM ++ + +
Sbjct: 367 LGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTT 426
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ MN E A R + + P+ + L+ G+ A + + + G
Sbjct: 427 IIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKG 486
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
+ ++ K + A+ L + GF++ K TL + + G VEE
Sbjct: 487 FGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEE 544
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 57/123 (46%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+E N+ YT +I GY K Q+ N L M +++T TVM+ YSK+G++K
Sbjct: 694 KEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMK 753
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A + E+ G D +Y + + + G ++ G + M + + + Y L+
Sbjct: 754 TAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLV 813
Query: 283 RGY 285
G+
Sbjct: 814 HGW 816
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/149 (20%), Positives = 66/149 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +IHG ++++A+ + M++ G + + V T ++ Y K G + +E+
Sbjct: 669 YSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMS 728
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+K +Y M+ Y ++G + LL EM + + + Y L G+ G E
Sbjct: 729 SYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIE 788
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQ 321
++ + + G+ D L++ +Q
Sbjct: 789 EGFKICDYMSQEGLPLDEITYTTLVHGWQ 817
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/288 (18%), Positives = 112/288 (38%), Gaps = 39/288 (13%)
Query: 157 AELALLEESFEANIRD----YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMV 212
+ L L E N+R T ++ G K+ + +A + +GF + VT ++
Sbjct: 439 SALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALI 498
Query: 213 VMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY 272
K GN++ A +++ G LDK +Y +++ + G ++ G L EM Q +
Sbjct: 499 HGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIE 558
Query: 273 VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA--------- 323
+ Y L+ G G + A ++ + + P+ ++I+ Y A
Sbjct: 559 PDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKL 618
Query: 324 --------------------------GQSQKAYTAFQNMRKAGLEPSDKCVALILSACEK 357
G + +A+ +MR G+ P+ + ++
Sbjct: 619 FTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCN 678
Query: 358 ENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A + ++ ++G + L + +LG +++V +VL+E
Sbjct: 679 IGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQE 726
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 80/213 (37%)
Query: 198 RRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLD 257
R+G D + + + K G ++ A + F +++ LG + +Y +++ + G LD
Sbjct: 239 RQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLD 298
Query: 258 RGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
+M V Y L+ G A V + G TP+ + LI
Sbjct: 299 EAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLI 358
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
+ Y G A +M G+ P+ + I+ K Q+ +A L ++ GF
Sbjct: 359 DGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFS 418
Query: 378 VGKEASCTLAAWFKRLGVVEEVEHVLREYGLRE 410
+ A T+ W E LRE LR
Sbjct: 419 INPGAFTTIIHWLCMNSRFESALRFLREMLLRN 451
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 44/237 (18%), Positives = 94/237 (39%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +IHG K + A M + G +T +V++ K A
Sbjct: 280 NVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVL 339
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E G ++ Y +++ Y + G L + +M ++ + S ++++G+
Sbjct: 340 KETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKI 399
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G E A+ + E + G + + +I+ M + + A + M + P+D +
Sbjct: 400 GQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLL 459
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ KE + + A+E L GF + L + G ++E +L++
Sbjct: 460 TTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKK 516
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 40/207 (19%), Positives = 82/207 (39%)
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL 221
+ + ++ ++ I+ + K ++++A M++ G + VT ++ K GNL
Sbjct: 238 MRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNL 297
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
A E++ G +Y ++ ++ + +L+E + VY L
Sbjct: 298 DEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTL 357
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+ GY GN A R+ + GI P++ +I + GQ ++A + M G
Sbjct: 358 IDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGF 417
Query: 342 EPSDKCVALILSACEKENQLNRALEFL 368
+ I+ ++ AL FL
Sbjct: 418 SINPGAFTTIIHWLCMNSRFESALRFL 444
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I GY K ++ A L M +G + D VT V+ + K G ++ + + +
Sbjct: 739 YTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMS 798
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGE 260
G PLD+ +Y ++V + + L E
Sbjct: 799 QEGLPLDEITYTTLVHGWQQPSALTNQE 826
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 297 VFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACE 356
VF + G+ P + C L+++ A + +K+Y F+ MR+ G+ P + ++A
Sbjct: 199 VFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFC 257
Query: 357 KENQLNRALEFLIDLERDG 375
K ++ A++ D+E+ G
Sbjct: 258 KGGKVEDAIQLFFDMEKLG 276
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 89/199 (44%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F+ N+ Y IIHGY + I+ A L AM+ +G D T ++ K G L+ A
Sbjct: 204 FKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEAS 263
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F+++ +G + +Y +++ Y G L+R EM + + Y L+
Sbjct: 264 GLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHAL 323
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
M G A + + ++ GI PDA +LIN Y G +++A+ M G+EP+
Sbjct: 324 FMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTH 383
Query: 346 KCVALILSACEKENQLNRA 364
++ + N++ A
Sbjct: 384 VTYTSLIYVLSRRNRMKEA 402
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 79/172 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+GY + + A + M +G VT T ++ + S+ +K A++ FE+I
Sbjct: 351 YNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKIL 410
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D + +M+ + G ++R +LL+EMD + V + L++G G E
Sbjct: 411 DQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVE 470
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A+ + + ++ GI PD LI+ Y G + A+ M G P+
Sbjct: 471 EARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPT 522
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 109/254 (42%), Gaps = 5/254 (1%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
L+ ++ E+ L+ N Y +I GY K ++ A + M ++G + T ++
Sbjct: 265 LFDKMVEIGLV-----PNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLL 319
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
V G + A++ +E++ G D +Y ++ Y R G R L EM ++ +
Sbjct: 320 VHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGI 379
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
Y +L+ S + A +FE I G++PD M +I+ + G ++A+
Sbjct: 380 EPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFM 439
Query: 332 AFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFK 391
+ M + + P + ++ +E ++ A L +++ G + TL + +
Sbjct: 440 LLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYG 499
Query: 392 RLGVVEEVEHVLRE 405
R G +++ V E
Sbjct: 500 RRGDIKDAFXVRDE 513
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 76/172 (44%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M+ GF + V+ ++ YS GN++ A + +++ G D +YGS++ + G
Sbjct: 199 MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGR 258
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
L+ L +M + + Y L+ GY G+ E A + + GI P L
Sbjct: 259 LEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNL 318
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
L++A M G+ +A + MRK G+ P ++++ + RA +
Sbjct: 319 LVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDL 370
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/216 (18%), Positives = 94/216 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++++ ++ Y ++H + ++ A++ + M+++G I D +T +++ YS+ GN
Sbjct: 304 MVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGN 363
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
K A + E+ G +Y S++ R + + L ++ Q V ++ A
Sbjct: 364 AKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNA 423
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G+ NGN E A + + + + PD L+ G+ ++A M+ G
Sbjct: 424 MIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRG 483
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
++P ++S + + A ++ GF
Sbjct: 484 IKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGF 519
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 69/152 (45%), Gaps = 3/152 (1%)
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
E F+E+ L D+ S S ++ + G L + + M+ Y ++ GY
Sbjct: 162 ELFDELTL---SRDRLSVKSSIVFDLLEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGY 218
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
S GN EGA+R+ +A++ GI PD+ LI+ G+ ++A F M + GL P+
Sbjct: 219 SSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNA 278
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFM 377
++ + L RA + ++ + G M
Sbjct: 279 VTYNTLIDGYCNKGDLERAFSYRDEMVKKGIM 310
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 65/149 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L++ ++ + +I G+ ++ A L M R+ D+VT ++ + G
Sbjct: 409 ILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGK 468
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ A +E+K G D SY +++ Y R G + + EM + Y A
Sbjct: 469 VEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNA 528
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPD 309
L++ N + A+ + + + GI+PD
Sbjct: 529 LIKCLCKNQEGDLAEELLKEMVNKGISPD 557
>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Brachypodium distachyon]
Length = 938
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 114/243 (46%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E+S N+ ++ II+G K+ + A + + MK RG + VT ++ K +
Sbjct: 412 EKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQE 471
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A + + E+ G ++K S+V + G +++ E L REM+ + V + Y L+
Sbjct: 472 AALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLI 531
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G GN A +V + + + PDA + + IN M G+S++A + + M+ GL+
Sbjct: 532 DGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLK 591
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P +++A +E + +AL+ L ++R TL G VE+ +++
Sbjct: 592 PDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYL 651
Query: 403 LRE 405
L E
Sbjct: 652 LNE 654
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 108/254 (42%), Gaps = 1/254 (0%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
L L++ E ++ A+I Y ++ + A L M RG D +T +
Sbjct: 682 LILEIHEW-MMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNAL 740
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
++ + K+G+L A T++++ G + ++ +++ AG + +++L EM + +
Sbjct: 741 ILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGI 800
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
+ Y L+ GY N A R++ + G P LI+ + G +A
Sbjct: 801 EPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKE 860
Query: 332 AFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFK 391
F M+ G+ P+ +++S K +FL D++ GF K +++ F
Sbjct: 861 LFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFS 920
Query: 392 RLGVVEEVEHVLRE 405
+ G+ E +L+
Sbjct: 921 KPGMSWEARRLLKN 934
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 108/241 (44%)
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA 224
S + N+ Y+ +I G + ++ A+ L M GF +T ++ S+ +
Sbjct: 624 SIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLI 683
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
E E + G D Y ++V GM + V+L EM + + + + AL+ G
Sbjct: 684 LEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILG 743
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
+ +G+ + A ++ + + GI+P+ L+ + AG+ ++ M+K G+EPS
Sbjct: 744 HFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPS 803
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
+ ++++ K++ A+ ++ GF+ L + F ++G++ + + +
Sbjct: 804 NLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFN 863
Query: 405 E 405
E
Sbjct: 864 E 864
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 86/212 (40%), Gaps = 2/212 (0%)
Query: 196 MKRRGFI--CDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRA 253
M R G I D V +V Y K G+++ A E +K G +D Y S+V RA
Sbjct: 163 MVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRA 222
Query: 254 GMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
G +D ++ M V Y + Y + A ++E + G+ PD
Sbjct: 223 GEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTL 282
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
+ L+ G+ +AY F+ M K G P+ +++ K + N +L L ++
Sbjct: 283 SALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVS 342
Query: 374 DGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
G ++ L W + G ++E + + R
Sbjct: 343 RGVVMDLIMYTALMDWLCKEGKIDEAKDMFRH 374
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 91/214 (42%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E + N+ Y +I G K + + A + M G ++ + +V K G ++
Sbjct: 447 ERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIE 506
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
AE F E+ G LD +Y +++ + G L + +E+ + + + VY +
Sbjct: 507 KAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFI 566
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
M G S+ A+ E +Q G+ PD +I A G++ KA M+++ ++
Sbjct: 567 NCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIK 626
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
P+ + ++ + + +A L ++ GF
Sbjct: 627 PNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGF 660
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 80/207 (38%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L E E N +++G K +I+ AE M RG + D V T ++ K GN
Sbjct: 480 MLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGN 539
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A + +E+ D Y + G E L EM + + Y
Sbjct: 540 LPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNT 599
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ S G + A ++ ++ + I P+ + LI AG +KA M +G
Sbjct: 600 MIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSG 659
Query: 341 LEPSDKCVALILSACEKENQLNRALEF 367
P+ +L AC + + + LE
Sbjct: 660 FSPTSLTHRRVLQACSQGRRSDLILEI 686
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 93/213 (43%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ E N+ YT I Y ++ + +A + M R+G + D VTL+ +V K G
Sbjct: 238 DGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSE 297
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F E++ +G + +Y ++ +A + LL E+ ++ V + +Y AL+
Sbjct: 298 AYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMD 357
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G + A+ +F TP+ +LI+A AG A M + + P
Sbjct: 358 WLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISP 417
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+ + I++ K + +A +++ +++ G
Sbjct: 418 NVVTFSSIINGLVKRGWVGKATDYMREMKERGI 450
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 76/178 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L N+ + ++ G +I ++ L MK+RG +T ++V Y K N
Sbjct: 760 MLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSN 819
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A + E+ G +Y +++ + + GM+ + + L EM + V S Y
Sbjct: 820 KVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDI 879
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
L+ G+S N ++ + ++ G +P + + A+ G S +A +N+ K
Sbjct: 880 LVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLLKNLYK 937
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 86/214 (40%), Gaps = 3/214 (1%)
Query: 194 LAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRA 253
LA+ R D V+ V++ +S+ G L E E+ G P D + ++++ R
Sbjct: 92 LALLRSSESVDTVSYNVVMSGFSEQGGLA-PEALLAEMCKRGVPFDAVTVNTVLVGLCRD 150
Query: 254 GMLDRGEVLLREMDAQEVYVGSEV--YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDAR 311
G +DR L M G +V + +L+ GY G+ E A V E ++ G+ D
Sbjct: 151 GRVDRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVV 210
Query: 312 MCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDL 371
L+ AG+ A M++ G+EP+ + + + N ++ A ++
Sbjct: 211 GYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEM 270
Query: 372 ERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
R G + L + G E + RE
Sbjct: 271 VRKGVLPDVVTLSALVGGLCKDGRFSEAYALFRE 304
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 42/214 (19%), Positives = 89/214 (41%), Gaps = 3/214 (1%)
Query: 183 KMQIQNAENTLLA-MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKR 241
K Q N +LL + RG + D + T ++ K G + A++ F +
Sbjct: 326 KAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGV 385
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI 301
+Y ++ A +AG +D E +L EM+ + + + +++ G G A +
Sbjct: 386 TYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREM 445
Query: 302 QFAGITPDARMCALLIN-AYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQ 360
+ GI P+ +I+ +++ GQ + A + M G+E + V +++ +K +
Sbjct: 446 KERGIDPNVVTYGTVIDGSFKCLGQ-EAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGK 504
Query: 361 LNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
+ +A ++ G ++ TL + G
Sbjct: 505 IEKAEALFREMNERGVLLDHVNYTTLIDGLFKTG 538
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 111/247 (44%), Gaps = 2/247 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L N Y +I+ GY K ++ +TL +M +G + D +++ S +G+
Sbjct: 584 MLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGH 643
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ A I+ G D YGS++ + +A +++ LL EM + + G Y A
Sbjct: 644 MQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNA 703
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G+ + + A+ +F +I G+ P+ LI+ Y AG + A + M G
Sbjct: 704 LIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEG 763
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+ P +++ + C L +AL ++ G+ + + + + KR + E V+
Sbjct: 764 VAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAIISSFNTLVHGFCKRGKLQETVK 823
Query: 401 --HVLRE 405
HV+ +
Sbjct: 824 FLHVMMD 830
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 95/219 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + + N Y +I GY ++ A TL M R D +++ S G
Sbjct: 479 MIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGK 538
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A E ++E+ G + +YG ++ Y AG L++ E LL +M + +Y
Sbjct: 539 MDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQ 598
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+L GY + N E +++ G+ PD R+ ++I+ +G Q A + + K G
Sbjct: 599 ILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNG 658
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
L P ++S K + +A+ L ++ + G G
Sbjct: 659 LVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPG 697
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 89/197 (45%), Gaps = 1/197 (0%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
E+ ++ Y +I G ++ A M +GF + T ++ YS AGNL+
Sbjct: 517 ENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEK 576
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
AE+ ++ G + Y ++ Y ++ L++ L+ M + + + +Y ++
Sbjct: 577 AEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIH 636
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
S +G+ + A V I+ G+ PD+ + LI+ + A +KA M K G+EP
Sbjct: 637 NLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEP 696
Query: 344 SDKCV-ALILSACEKEN 359
C ALI C+ ++
Sbjct: 697 GISCYNALIDGFCKSDD 713
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 87/182 (47%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M+ G D T + ++ Y K +L+ A++ EE++ G L+ +Y +++ RAG
Sbjct: 234 MEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGA 293
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
++ +EM+ + Y A++ G G + A+ + + + AG+ P+ + +
Sbjct: 294 IEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYST 353
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
LI+ + G + +A+ + M AG++P+ ++ K ++ RA L + + G
Sbjct: 354 LIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIG 413
Query: 376 FM 377
+M
Sbjct: 414 YM 415
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 100/226 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y II+G K+ + A+ L M G + + V + ++ + + GN A + +E+
Sbjct: 316 YGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMS 375
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G +K +Y +++ + G + R +L++M + Y ++ G+ N E
Sbjct: 376 AAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKE 435
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + ++ GI+P+ +++IN G+S++A + M GL+P+ A ++
Sbjct: 436 EAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLI 495
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
S +E + A E L + R+ +L +G ++E
Sbjct: 496 SGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDE 541
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 97/237 (40%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y+ +I G+ ++ A + M G +++T ++ K G + A
Sbjct: 347 NVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRIL 406
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+++ +G D +Y ++ ++R + +LL EM + Y ++ G
Sbjct: 407 KQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQI 466
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G SE A + E + G+ P+A + A LI+ Y G A + M + L P C
Sbjct: 467 GESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCY 526
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ +++ A+E+ ++ GF L + G +E+ E +L +
Sbjct: 527 NSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQ 583
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 92/208 (44%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y+ +I Y K +++A+ + M+ G + VT ++ +AG ++ A
Sbjct: 242 DVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYK 301
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E++ G D +YG+++ + G D+ + LL EM + VY L+ G+
Sbjct: 302 KEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQ 361
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
GN++ A ++ + + AG+ P+ LI G+ +A + M K G
Sbjct: 362 GNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTY 421
Query: 349 ALILSACEKENQLNRALEFLIDLERDGF 376
L++ +++ A L ++ + G
Sbjct: 422 NLVIEGHLRQHNKEEAFLLLNEMRKGGI 449
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 87/212 (41%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
+ A+ Y +I G+ ++ + A L M++ G + T ++++ + G + A
Sbjct: 414 YMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERAS 473
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
E++ G + Y ++ Y R G L++M + + Y +L+ G
Sbjct: 474 GLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGL 533
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
S G + A ++ + G P+ LI+ Y MAG +KA M +GL P+D
Sbjct: 534 SNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPND 593
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFM 377
A IL K + L + L + G M
Sbjct: 594 FIYAQILEGYFKSDNLEKVSSTLKSMLEKGLM 625
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 85/214 (39%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E N+ Y +I G + I+ A M+ G + D T ++ K G
Sbjct: 271 ETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPD 330
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A+ +E+ G + Y +++ ++R G D +++EM A V Y L+
Sbjct: 331 QAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLI 390
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
RG G A R+ + + G D L+I + ++A+ MRK G+
Sbjct: 391 RGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGIS 450
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
P+ ++I++ + + RA L + DG
Sbjct: 451 PNVYTYSIIINGLCQIGESERASGLLEQMIADGL 484
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 92/231 (39%), Gaps = 26/231 (11%)
Query: 159 LALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
+ LL+E E I Y +I G+ K I +A N ++ +G + VT T ++
Sbjct: 683 VGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDG 742
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
Y KAG+++ A + + E+ G D Y + +G L + + EM A+ +
Sbjct: 743 YCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAII 802
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTA-- 332
S + L+ G+ G + + + I P ++ AG+ +A+T
Sbjct: 803 SS-FNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFV 861
Query: 333 ------------------FQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
F +M GL P D +I S C K+ L++AL
Sbjct: 862 ELQQKNASHRDTDHLSSLFTDMINQGLVPLDVIHNMIQSHC-KQGYLDKAL 911
Score = 38.1 bits (87), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 32/167 (19%), Positives = 66/167 (39%)
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
D +Y +++ AY + L+ + ++ EM + Y L+ G G E A
Sbjct: 242 DVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYK 301
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
+ ++ G+ PD +IN G+ +A M AGL P+ + ++ ++
Sbjct: 302 KEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQ 361
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ A + + ++ G K L +LG + +L++
Sbjct: 362 GNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQ 408
>gi|297832604|ref|XP_002884184.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330024|gb|EFH60443.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 829
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 120/278 (43%), Gaps = 36/278 (12%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAEN-------------------------------- 191
+ + ++R YT I+H Y + + + A N
Sbjct: 211 QDYMLDVRAYTTILHAYSRTGKYEKAINLFERMKEMGPSPTLVTYNVILDVFGKMGRSWR 270
Query: 192 ----TLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMV 247
L M+ +G D+ T + ++ ++ G L+ A++ F E+K G +Y +++
Sbjct: 271 KILGVLEEMRSKGLKFDEFTCSTVLSACAREGLLREAKDFFAELKSCGYEPGTVTYNALL 330
Query: 248 MAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGIT 307
+ +AG+ +L+EM+ S Y L+ Y+ G S+ A V E + G+
Sbjct: 331 QVFGKAGVYTEALSVLKEMEENNCPADSVTYNELVAAYARAGFSKEAAVVIEMMTQKGVM 390
Query: 308 PDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
P+A +I+AY AG+ +A F +M++AG P+ +LS K+++ N ++
Sbjct: 391 PNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSMLGKKSRSNEMIKM 450
Query: 368 LIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
L D++ +G + T+ A G+ + V V RE
Sbjct: 451 LCDMKSNGCFPNRATWNTILALCGNKGMDKFVNRVFRE 488
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 88/195 (45%), Gaps = 16/195 (8%)
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+V+ S +G LK+ I++L L + S S V A +LD+ + Q+
Sbjct: 169 LVLSSNSGALKLDHHV---IEILVRILGRESQYS-----VAAKLLDK-------IPLQDY 213
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS-QKAY 330
+ Y +L YS G E A +FE ++ G +P ++++ + G+S +K
Sbjct: 214 MLDVRAYTTILHAYSRTGKYEKAINLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKIL 273
Query: 331 TAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWF 390
+ MR GL+ + + +LSAC +E L A +F +L+ G+ G L F
Sbjct: 274 GVLEEMRSKGLKFDEFTCSTVLSACAREGLLREAKDFFAELKSCGYEPGTVTYNALLQVF 333
Query: 391 KRLGVVEEVEHVLRE 405
+ GV E VL+E
Sbjct: 334 GKAGVYTEALSVLKE 348
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 88/209 (42%)
Query: 186 IQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGS 245
++ A++ +K G+ VT ++ ++ KAG A +E++ P D +Y
Sbjct: 304 LREAKDFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENNCPADSVTYNE 363
Query: 246 MVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAG 305
+V AY RAG V++ M + V + Y ++ Y G + A ++F +++ AG
Sbjct: 364 LVAAYARAGFSKEAAVVIEMMTQKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAG 423
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
P+ +++ +S + +M+ G P+ IL+ C +
Sbjct: 424 CVPNTCTYNAVLSMLGKKSRSNEMIKMLCDMKSNGCFPNRATWNTILALCGNKGMDKFVN 483
Query: 366 EFLIDLERDGFMVGKEASCTLAAWFKRLG 394
+++ GF ++ TL + + R G
Sbjct: 484 RVFREMKSCGFEPDRDTFNTLISAYGRCG 512
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/244 (19%), Positives = 109/244 (44%), Gaps = 12/244 (4%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN---LK 222
F A + Y +++ +K ++ EN + MK +GF + + ++M+ Y+K GN ++
Sbjct: 529 FNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIE 588
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGML---DRGEVLLREMDAQEVYVGSEVYK 279
EE E ++ + R+ +++A + L +R L ++ + V ++
Sbjct: 589 RIEEGINEGQIFPSWMLLRT---LLLANFKCRALAGSERAFTLFKKHGYKPDMV---IFN 642
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
++L ++ N + A+ + ++I G+ PD L++ Y G+ KA + + K+
Sbjct: 643 SMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRGECWKAEEILKTLEKS 702
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEV 399
L+P ++ ++ + A+ L ++ G T + + +G+ E+
Sbjct: 703 QLKPDLVSYNTVIKGFCRKGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMYGEI 762
Query: 400 EHVL 403
E V+
Sbjct: 763 EDVI 766
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/214 (19%), Positives = 85/214 (39%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E + A+ Y +++ Y + + A + M ++G + + +T T ++ Y KAG
Sbjct: 351 ENNCPADSVTYNELVAAYARAGFSKEAAVVIEMMTQKGVMPNAITYTTVIDAYGKAGKED 410
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A + F +K G + +Y +++ + + +L +M + + + +L
Sbjct: 411 EALKLFYSMKEAGCVPNTCTYNAVLSMLGKKSRSNEMIKMLCDMKSNGCFPNRATWNTIL 470
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G + RVF ++ G PD LI+AY G A + M +AG
Sbjct: 471 ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFN 530
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+L+A ++ + D++ GF
Sbjct: 531 ACVTTYNALLNALARKGDWRSGENVISDMKSKGF 564
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/183 (18%), Positives = 76/183 (41%)
Query: 186 IQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGS 245
+ +E K+ G+ D V M+ ++++ AE + I G D +Y S
Sbjct: 619 LAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYNS 678
Query: 246 MVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAG 305
++ YVR G + E +L+ ++ ++ Y +++G+ G + A R+ + G
Sbjct: 679 LMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRKGLMQEAVRMLSEMTERG 738
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
I P ++ Y G + + M K P++ +++ + + + A+
Sbjct: 739 IRPCIFTYNTFVSGYTAMGMYGEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAM 798
Query: 366 EFL 368
+F+
Sbjct: 799 DFV 801
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 51/273 (18%), Positives = 103/273 (37%)
Query: 133 PRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENT 192
P RA W +L ++ + FE + + +I YG+ +A
Sbjct: 461 PNRATWNTILALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKM 520
Query: 193 LLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVR 252
M R GF T ++ ++ G+ + E ++K G + SY M+ Y +
Sbjct: 521 YGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAK 580
Query: 253 AGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARM 312
G E + ++ +++ + + LL G++R F + G PD +
Sbjct: 581 GGNYLGIERIEEGINEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVI 640
Query: 313 CALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLE 372
+++ + +A Q++ + GL P ++ + + +A E L LE
Sbjct: 641 FNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRGECWKAEEILKTLE 700
Query: 373 RDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ + T+ F R G+++E +L E
Sbjct: 701 KSQLKPDLVSYNTVIKGFCRKGLMQEAVRMLSE 733
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 66/166 (39%), Gaps = 14/166 (8%)
Query: 178 HGYGKKMQIQN--------------AENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
HGY M I N AE L ++ G D VT ++ MY + G
Sbjct: 632 HGYKPDMVIFNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRGECWK 691
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
AEE + ++ D SY +++ + R G++ +L EM + + Y +
Sbjct: 692 AEEILKTLEKSQLKPDLVSYNTVIKGFCRKGLMQEAVRMLSEMTERGIRPCIFTYNTFVS 751
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
GY+ G + V E + P+ ++++ Y AG+ +A
Sbjct: 752 GYTAMGMYGEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEA 797
>gi|414879860|tpg|DAA56991.1| TPA: hypothetical protein ZEAMMB73_837882 [Zea mays]
Length = 677
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 119/260 (45%), Gaps = 33/260 (12%)
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA 224
S + N+ Y +I YGK ++ + A + M+ G D +T + ++ ++ KAG L A
Sbjct: 393 SVKPNVVTYNTMITIYGKSLEDEKAGRLVQEMQAIGVQPDAITYSTILSIWVKAGKLDRA 452
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE-------------- 270
FE+++ G +D Y +MV+AY RAG++ + + LLR++ E
Sbjct: 453 ARLFEKLREAGTEIDPVLYQTMVVAYERAGLVSQAKRLLRDLKDPEGIPKETAIKILASA 512
Query: 271 -------------VYVG----SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
V G S V++A++ Y+ N VF+ ++ G PD+ +
Sbjct: 513 GRLEEAAWLFRRAVNTGEIKDSSVHRAMMDLYAKNRRHRNVIEVFDEMRKLGQLPDSEII 572
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLI-DLE 372
A +NAY + KA +Q MR+AG SD+ ++S + +ALE L+ +L
Sbjct: 573 ATAMNAYGKLKEFDKAAALYQAMREAGCVFSDRVHFQMISLLGAQKDF-KALEVLVGELS 631
Query: 373 RDGFMVGKEASCTLAAWFKR 392
D + +E A ++R
Sbjct: 632 HDPSIDKRELYLVAAGVYER 651
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 91/195 (46%), Gaps = 7/195 (3%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
L L++ E + ++F Y+ ++ + + +A L M+ D + + +
Sbjct: 164 LLLEMRERGVTPDAFS-----YSTLLAALTRAGHLDHALTFLPLMEDDAVAPDLILFSNL 218
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGML-DRGEVLLREMDAQE 270
+ + + G+ A F ++ G D ++Y + V AY ++ +L D +LL +M A
Sbjct: 219 IHLALRGGDAPKALALFSRLRAAGIRPDLKAYNAAVAAYCKSDLLRDAKRMLLHDMPADG 278
Query: 271 VYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQ-FAGITPDARMCALLINAYQMAGQSQKA 329
V +E Y +L + G A +F ++ A + PD + +++NAY +++A
Sbjct: 279 VAPDAETYSPILAALARRGRHLAAVSLFSHMRAVARVKPDISVFNIILNAYGQLDLAREA 338
Query: 330 YTAFQNMRKAGLEPS 344
F +MR+AG+ PS
Sbjct: 339 DRLFWSMRRAGVPPS 353
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 17/200 (8%)
Query: 208 LTVMVVMYSKAGNLKMAEET---FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEV--- 261
++V ++ + G L +A E F ++ G P +Y +M+ Y AG+ GE
Sbjct: 319 ISVFNIILNAYGQLDLAREADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGLF--GEAVHL 376
Query: 262 --LLREMDAQEVYVGSEV------YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
L+R GS V Y ++ Y + E A R+ + +Q G+ PDA
Sbjct: 377 FDLMRSTSDGNGGAGSSVKPNVVTYNTMITIYGKSLEDEKAGRLVQEMQAIGVQPDAITY 436
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
+ +++ + AG+ +A F+ +R+AG E ++ A E+ +++A L DL +
Sbjct: 437 STILSIWVKAGKLDRAARLFEKLREAGTEIDPVLYQTMVVAYERAGLVSQAKRLLRDL-K 495
Query: 374 DGFMVGKEASCTLAAWFKRL 393
D + KE + + A RL
Sbjct: 496 DPEGIPKETAIKILASAGRL 515
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 107/255 (41%), Gaps = 26/255 (10%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRD 172
V+P+ S +LAA R R LA + M VA + + +I
Sbjct: 279 VAPDAETYSPILAALAR-----RGRHLAAVSLFSHMR-----AVARV-------KPDISV 321
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+ I++ YG+ + A+ +M+R G VT M+ +Y AG A F+ ++
Sbjct: 322 FNIILNAYGQLDLAREADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGLFGEAVHLFDLMR 381
Query: 233 LLGE---------PLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
+ + +Y +M+ Y ++ ++ L++EM A V + Y +L
Sbjct: 382 STSDGNGGAGSSVKPNVVTYNTMITIYGKSLEDEKAGRLVQEMQAIGVQPDAITYSTILS 441
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
+ G + A R+FE ++ AG D + ++ AY+ AG +A ++++ P
Sbjct: 442 IWVKAGKLDRAARLFEKLREAGTEIDPVLYQTMVVAYERAGLVSQAKRLLRDLKDPEGIP 501
Query: 344 SDKCVALILSACEKE 358
+ + ++ SA E
Sbjct: 502 KETAIKILASAGRLE 516
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 1/153 (0%)
Query: 243 YGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQ 302
Y ++ + RAG L LL EM + V + Y LL + G+ + A ++
Sbjct: 145 YNLLLRSACRAGELRLASGLLLEMRERGVTPDAFSYSTLLAALTRAGHLDHALTFLPLME 204
Query: 303 FAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLN 362
+ PD + + LI+ G + KA F +R AG+ P K ++A K + L
Sbjct: 205 DDAVAPDLILFSNLIHLALRGGDAPKALALFSRLRAAGIRPDLKAYNAAVAAYCKSDLLR 264
Query: 363 RALEFLI-DLERDGFMVGKEASCTLAAWFKRLG 394
A L+ D+ DG E + A R G
Sbjct: 265 DAKRMLLHDMPADGVAPDAETYSPILAALARRG 297
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 9/149 (6%)
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMD----AQEVY 272
+AG L++A E++ G D SY +++ A RAG LD L M+ A ++
Sbjct: 154 RAGELRLASGLLLEMRERGVTPDAFSYSTLLAALTRAGHLDHALTFLPLMEDDAVAPDLI 213
Query: 273 VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA-YT 331
+ S + LRG G++ A +F ++ AGI PD + + AY + + A
Sbjct: 214 LFSNLIHLALRG----GDAPKALALFSRLRAAGIRPDLKAYNAAVAAYCKSDLLRDAKRM 269
Query: 332 AFQNMRKAGLEPSDKCVALILSACEKENQ 360
+M G+ P + + IL+A + +
Sbjct: 270 LLHDMPADGVAPDAETYSPILAALARRGR 298
>gi|326524964|dbj|BAK04418.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 565
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 96/212 (45%), Gaps = 1/212 (0%)
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRG-FICDQVTLTVMVVMYSKAGNLKM 223
+A++ DY +I K Q++ A MKR G F+ D T TV++ + +L M
Sbjct: 243 GLKADLSDYNWLIDVLSKSKQVKKAHAIFKEMKRNGRFVPDLKTYTVLMEGWGHEKDLLM 302
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
+ ++E+ G D +YG ++ ++ ++G D + REM+ VY L+
Sbjct: 303 LKSVYQEMLDAGLQPDVVAYGMLISSFCKSGKCDEAIKVFREMETNGCMPSPHVYCMLIN 362
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G + A + FE + +G + C ++ AY + + Q A+ MRK+G+ P
Sbjct: 363 GLGSEERLDEALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKSGIGP 422
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDG 375
+ + +IL K ++ A + +DG
Sbjct: 423 NSRTYDIILHHLIKSQKIEEAYNVFQGMSKDG 454
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 100/215 (46%), Gaps = 2/215 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
++ F + +I GK Q + + + AM+ RG + + T ++V Y++A +K
Sbjct: 172 QQGFVYTADSFHNLIEALGKIKQFRLVWSLVEAMRCRGLL-SKDTFRLIVRRYARARKVK 230
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS-EVYKAL 281
A ETFE++ G D Y ++ ++ + + + +EM +V + Y L
Sbjct: 231 EAVETFEKMAGFGLKADLSDYNWLIDVLSKSKQVKKAHAIFKEMKRNGRFVPDLKTYTVL 290
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+ G+ + + V++ + AG+ PD +LI+++ +G+ +A F+ M G
Sbjct: 291 MEGWGHEKDLLMLKSVYQEMLDAGLQPDVVAYGMLISSFCKSGKCDEAIKVFREMETNGC 350
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
PS ++++ E +L+ AL++ + GF
Sbjct: 351 MPSPHVYCMLINGLGSEERLDEALKYFELSKASGF 385
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 37/200 (18%), Positives = 85/200 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+G G + ++ A K GF + T +V Y ++ + A + +E++
Sbjct: 357 YCMLINGLGSEERLDEALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMR 416
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + R+Y ++ +++ ++ + + M Y ++ + N +
Sbjct: 417 KSGIGPNSRTYDIILHHLIKSQKIEEAYNVFQGMSKDGCEPQLNTYTMMVGMFCSNERVD 476
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +V+ ++ G+ P M + LIN + ++A FQ M G+ P + + +
Sbjct: 477 VALKVWNQMKEKGVLPCMHMFSALINGLCFENRLEEACAYFQEMLDRGIRPPGQLFSNLK 536
Query: 353 SACEKENQLNRALEFLIDLE 372
A + +++ A E + L+
Sbjct: 537 EALIEGGRISLAQEMALKLD 556
>gi|302829725|ref|XP_002946429.1| hypothetical protein VOLCADRAFT_103021 [Volvox carteri f.
nagariensis]
gi|300268175|gb|EFJ52356.1| hypothetical protein VOLCADRAFT_103021 [Volvox carteri f.
nagariensis]
Length = 961
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 105/218 (48%), Gaps = 4/218 (1%)
Query: 162 LEESFE----ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSK 217
LE S E ++ YT +I G Q++ A + M+ RG C+ T + ++ + K
Sbjct: 264 LEPSHELSSLCDLYTYTTMISQCGSHQQLRRALELVAEMRSRGIDCNVHTYSALMNVCIK 323
Query: 218 AGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
A L +A++ ++++ G + +Y ++ YV+ + +L ++ Q +
Sbjct: 324 ANELDLAQDVYKQMLEEGCSPNLVTYNILIDVYVKRCQWEEAVKVLDTLEKQAIQAEVRT 383
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y ++ + +G E A +V+E + AG+ P A LI+AY GQ +KA F++M
Sbjct: 384 YNTVISACNKSGQPEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALEIFRDMI 443
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+ G E + + ++SACEK + ALE + ++
Sbjct: 444 RRGCERNVITYSSLISACEKAGRWEMALELFSKMHKEN 481
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 89/210 (42%), Gaps = 13/210 (6%)
Query: 134 RRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTL 193
+R W +K L +E +++ +A +R Y +I K Q + A
Sbjct: 358 KRCQWEEAVKVLDTLE-------------KQAIQAEVRTYNTVISACNKSGQPEQALKVY 404
Query: 194 LAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRA 253
M G T T ++ Y K G ++ A E F ++ G + +Y S++ A +A
Sbjct: 405 EKMLAAGVKPSATTYTALISAYGKKGQVEKALEIFRDMIRRGCERNVITYSSLISACEKA 464
Query: 254 GMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
G + L +M + + +L+ S G+ E A +FE +Q G PD+
Sbjct: 465 GRWEMALELFSKMHKENCKPNVVTFNSLIAACSHGGHWEKASELFEQMQTQGCKPDSITY 524
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
LI AY+ GQ ++A AF+ M+ G P
Sbjct: 525 CGLITAYERGGQWRRALKAFEQMQTQGCHP 554
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 62/138 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I YGKK Q++ A M RRG + +T + ++ KAG +MA E F ++
Sbjct: 419 YTALISAYGKKGQVEKALEIFRDMIRRGCERNVITYSSLISACEKAGRWEMALELFSKMH 478
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ ++ S++ A G ++ L +M Q S Y L+ Y G
Sbjct: 479 KENCKPNVVTFNSLIAACSHGGHWEKASELFEQMQTQGCKPDSITYCGLITAYERGGQWR 538
Query: 293 GAQRVFEAIQFAGITPDA 310
A + FE +Q G PDA
Sbjct: 539 RALKAFEQMQTQGCHPDA 556
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 93/215 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+LEE N+ Y +I Y K+ Q + A L ++++ + T ++ +K+G
Sbjct: 337 MLEEGCSPNLVTYNILIDVYVKRCQWEEAVKVLDTLEKQAIQAEVRTYNTVISACNKSGQ 396
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + +E++ G +Y +++ AY + G +++ + R+M + Y +
Sbjct: 397 PEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALEIFRDMIRRGCERNVITYSS 456
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G E A +F + P+ LI A G +KA F+ M+ G
Sbjct: 457 LISACEKAGRWEMALELFSKMHKENCKPNVVTFNSLIAACSHGGHWEKASELFEQMQTQG 516
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+P +++A E+ Q RAL+ ++ G
Sbjct: 517 CKPDSITYCGLITAYERGGQWRRALKAFEQMQTQG 551
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 122/283 (43%), Gaps = 37/283 (13%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
+ +LE + ++ Y +I G+ K Q++NA L MK RGF+ D VT +M+ +
Sbjct: 127 MEILERYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSR 186
Query: 219 GNLKMAEETFEEI-----------------------------KLLGEPL------DKRSY 243
G L +A E FEE+ KLL E L D +Y
Sbjct: 187 GKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTY 246
Query: 244 GSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN-SEGAQRVFEAIQ 302
+++ + M+D+ LLR + ++ Y LLR G SEG + + E I
Sbjct: 247 NAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMIS 306
Query: 303 FAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLN 362
G P+ ++LI G+ ++A ++M++ GL+P C +++ +E +L+
Sbjct: 307 I-GCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLD 365
Query: 363 RALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
A EFL + DG + T+ A R G ++ V +
Sbjct: 366 LATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEK 408
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 98/243 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + E + Y II G K+M + A L ++ RG D +T +++ G
Sbjct: 234 MLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGK 293
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
E+ E+ +G + ++ ++ R G ++ LLR M + + + Y
Sbjct: 294 WSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDP 353
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G+ G + A E + G PD ++ G++ +A F+ + + G
Sbjct: 354 LIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVG 413
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
P+ + SA RALE ++ L G + +L + R G+V+E
Sbjct: 414 CPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAI 473
Query: 401 HVL 403
+L
Sbjct: 474 ELL 476
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 74/183 (40%), Gaps = 1/183 (0%)
Query: 193 LLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVR 252
L M +G+ D + T ++ + + N+ A E ++ G+P D +Y +++ +++
Sbjct: 92 LECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYGKP-DVFAYNALISGFIK 150
Query: 253 AGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARM 312
A L+ +L M ++ Y ++ + G + A +FE + P
Sbjct: 151 ANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVIT 210
Query: 313 CALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLE 372
+LI A + G A M GLEP I+ KE +++A E L L
Sbjct: 211 YTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLS 270
Query: 373 RDG 375
G
Sbjct: 271 SRG 273
>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 831
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 124/290 (42%), Gaps = 42/290 (14%)
Query: 123 LLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGK 182
++ A+ R KP++ D ++ + A ++ E N+ YT +IH Y
Sbjct: 180 VVDAFKRIKKPKQRDHTLLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAV 239
Query: 183 KMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRS 242
++ A + M+ G + T +V++ Y + G+++ AE F+ + L E
Sbjct: 240 AQDLRGAIACVEEMEAEGVSPNAATYSVIISGYGRLGDVEAAERWFQ--RALSENWHHND 297
Query: 243 --YGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG---------------- 284
Y +++ AY +AG ++R E ++ M+ Q + +Y L+ G
Sbjct: 298 VIYNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRR 357
Query: 285 ----------------------YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQM 322
YS G + A ++ ++ GI + + +++I+ Y
Sbjct: 358 LKARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQ 417
Query: 323 AGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLE 372
G + A++ F++M AG++P ++++A K Q+NRALE L +E
Sbjct: 418 LGDTANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARME 467
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 93/218 (42%), Gaps = 3/218 (1%)
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL 221
L E++ N Y IIH Y K ++ AE + AM+ +G +++ Y +
Sbjct: 289 LSENWHHNDVIYNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAV 348
Query: 222 KMAEETFEEIKL---LGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
F +K G SYG ++ Y + G +D+ + EM+ Q + + Y
Sbjct: 349 DKCLNVFRRLKARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTY 408
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
++ GY G++ A VFE + AGI PD +L+NA+ GQ +A M
Sbjct: 409 SMIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMES 468
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
P+ + +I+ K L A E + D++ GF
Sbjct: 469 GDCPPTLRTYTIIIDGFMKIGDLRMAFETVRDMKMAGF 506
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 110/242 (45%), Gaps = 3/242 (1%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F + Y I+HG + Q+ A + + M G ++ + T ++ Y+ G++ +A
Sbjct: 506 FRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNERSYTTLIEGYACIGDMGLAF 565
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+ F IK +G D +Y S++ A +AG + + EM A V + + +Y LL G+
Sbjct: 566 KYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAITAEMAAAGVPMNNYIYNILLDGW 625
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
+ G+ A + + ++ G+TPD INA AG KA + M++ G++P+
Sbjct: 626 AQRGDMWEASDIMQKMRHEGLTPDIHSYTSFINACCKAGDMLKATETIEQMKQQGVQPNL 685
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEA-SCTLAAWFKRLGVVEEV--EHV 402
+ ++ + +AL +++ G + K C + + R V E + V
Sbjct: 686 QAYTTLIHGWASASYPEKALICYDEMKSAGMIPDKPLYHCIMTSLLSRAAVARETVFDGV 745
Query: 403 LR 404
LR
Sbjct: 746 LR 747
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 90/213 (42%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
++ + N + Y+ II GY + NA + M G D +T +++ + K G +
Sbjct: 398 DQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMN 457
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A E ++ P R+Y ++ +++ G L +R+M + Y ++
Sbjct: 458 RALELLARMESGDCPPTLRTYTIIIDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIM 517
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G + G + A + + + AG+ P+ R LI Y G A+ F +++ GL+
Sbjct: 518 HGLAQAGQMDRAASIIDEMVVAGVHPNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLK 577
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDG 375
P A +L AC K ++ L ++ G
Sbjct: 578 PDVIAYASLLKACCKAGRMQSTLAITAEMAAAG 610
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 112/277 (40%), Gaps = 43/277 (15%)
Query: 153 YLQVAELA----LLEESFEANIR----DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICD 204
Y+Q+ + A + E+ A I+ Y +++ + K Q+ A L M+
Sbjct: 415 YVQLGDTANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPT 474
Query: 205 QVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLR 264
T T+++ + K G+L+MA ET ++K+ G +Y ++ +AG +DR ++
Sbjct: 475 LRTYTIIIDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIID 534
Query: 265 EMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAG 324
EM V+ Y L+ GY+ G+ A + F I+ G+ PD A L+ A AG
Sbjct: 535 EMVVAGVHPNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAG 594
Query: 325 --QSQKAYTA---------------------------------FQNMRKAGLEPSDKCVA 349
QS A TA Q MR GL P
Sbjct: 595 RMQSTLAITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYT 654
Query: 350 LILSACEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
++AC K + +A E + +++ G +A TL
Sbjct: 655 SFINACCKAGDMLKATETIEQMKQQGVQPNLQAYTTL 691
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/227 (19%), Positives = 103/227 (45%), Gaps = 3/227 (1%)
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
RD+T +++ YGK+ +A +M+ G + + T ++ Y+ A +L+ A EE
Sbjct: 193 RDHTLLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIACVEE 252
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
++ G + +Y ++ Y R G ++ E + ++ + +Y ++ Y GN
Sbjct: 253 MEAEGVSPNAATYSVIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCKAGN 312
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR---KAGLEPSDKC 347
E A+ + A++ G+ + +L++ Y K F+ ++ + GL P+
Sbjct: 313 MERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPTVVS 372
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
+++ K ++++AL+ ++E G ++ + + +LG
Sbjct: 373 YGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLG 419
Score = 44.7 bits (104), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%)
Query: 308 PDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
P R LL+N Y G A AF++MR AG+EP+ ++ A L A+
Sbjct: 190 PKQRDHTLLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIAC 249
Query: 368 LIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+ ++E +G + + + RLG VE E
Sbjct: 250 VEEMEAEGVSPNAATYSVIISGYGRLGDVEAAE 282
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/147 (19%), Positives = 65/147 (44%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E + ++ Y ++ K ++Q+ M G + +++ +++ G++
Sbjct: 573 EVGLKPDVIAYASLLKACCKAGRMQSTLAITAEMAAAGVPMNNYIYNILLDGWAQRGDMW 632
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A + ++++ G D SY S + A +AG + + + +M Q V + Y L+
Sbjct: 633 EASDIMQKMRHEGLTPDIHSYTSFINACCKAGDMLKATETIEQMKQQGVQPNLQAYTTLI 692
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPD 309
G++ E A ++ ++ AG+ PD
Sbjct: 693 HGWASASYPEKALICYDEMKSAGMIPD 719
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 61/155 (39%), Gaps = 1/155 (0%)
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
K A + + K + +P +R + +V Y + G M A + Y L
Sbjct: 175 KDARKVVDAFKRIKKP-KQRDHTLLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNL 233
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+ Y++ + GA E ++ G++P+A +++I+ Y G + A FQ
Sbjct: 234 IHAYAVAQDLRGAIACVEEMEAEGVSPNAATYSVIISGYGRLGDVEAAERWFQRALSENW 293
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+D I+ A K + RA + +E G
Sbjct: 294 HHNDVIYNNIIHAYCKAGNMERAEAIMTAMEEQGL 328
>gi|297829500|ref|XP_002882632.1| HCF152 [Arabidopsis lyrata subsp. lyrata]
gi|297328472|gb|EFH58891.1| HCF152 [Arabidopsis lyrata subsp. lyrata]
Length = 772
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 91/181 (50%), Gaps = 6/181 (3%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKR---RGFICDQVTLTVMVVMYSK 217
LL + F + R YT ++ GY K ++ + L AM+R R D+VT T +V + K
Sbjct: 399 LLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVK 458
Query: 218 AGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
AG + A + E+ +G P ++ +Y ++ Y + +DR E LLREM A++ + +V
Sbjct: 459 AGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREM-AEDAGIEPDV 517
Query: 278 --YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
Y ++ G + +S GA F ++ GI P L+ A+ M+GQ + A F
Sbjct: 518 VSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDE 577
Query: 336 M 336
M
Sbjct: 578 M 578
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 103/250 (41%), Gaps = 31/250 (12%)
Query: 156 VAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAM-KRRGFICDQVTLTVMV-- 212
+AE+A + AN Y ++ GY K++QI AE+ L M + G D V+ +++
Sbjct: 469 LAEMARM--GVPANRITYNVLLKGYCKQLQIDRAEDLLREMAEDAGIEPDVVSYNIIIDG 526
Query: 213 --VMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM-DAQ 269
++ AG L F E++ G K SY +++ A+ +G + EM +
Sbjct: 527 CILIDDSAGALAF----FNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDP 582
Query: 270 EVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
V V + L+ GY G E AQRV ++ G P+ L N +A + +A
Sbjct: 583 RVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSLARKPGEA 642
Query: 330 YTAFQNMRK-------------------AGLEPSDKCVALILSACEKENQLNRALEFLID 370
++ +++ L+P + + + C + +ALE +
Sbjct: 643 LLLWKEIKERCEVKKKEAPSDSSSDPSPPMLKPDEGLLDTLADICVRAAFFKKALEIIAC 702
Query: 371 LERDGFMVGK 380
+E +G K
Sbjct: 703 MEENGIPPNK 712
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 95/216 (43%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+ E E N+ Y ++HGY +M++ A M RG D + ++++ Y
Sbjct: 326 TMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVK 385
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ A++ F E+ G + SY +++ A+ + G L L ++M Y
Sbjct: 386 RIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYS 445
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
LL G+ G A R+F A+Q + P+ M +LI++ +G A F +
Sbjct: 446 VLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVH 505
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
GL+P + I++ KE L+ ALE +E DG
Sbjct: 506 GLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDG 541
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 101/221 (45%), Gaps = 4/221 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y+ +I+GY +I A+ M +G + V+ T ++ + + G L+ A E F
Sbjct: 370 DVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELF 429
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+++ G D +Y ++ + + G L + L R M + +Y L+ +
Sbjct: 430 KDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKS 489
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
GN A+++F + G+ PD ++ +IN G +A AF+ M + G P++
Sbjct: 490 GNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSY 549
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAW 389
+I+ + +RA++ + ++ GF V E + AW
Sbjct: 550 NVIIRGFLQHKDESRAVQLIGEMRDKGF-VADEGT---TAW 586
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 102/252 (40%), Gaps = 2/252 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E + ++ Y+ +I K + A + MK +G V+ T ++ K
Sbjct: 224 EVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWK 283
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A E+ L D ++ ++ + + G + + +L+ M V Y +L+
Sbjct: 284 EASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLM 343
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
GYS+ A+++F+ + G PD ++LIN Y M + +A F M GL
Sbjct: 344 HGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLT 403
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ ++ A + +L A E D+ +G++ L F + G + + +
Sbjct: 404 PNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRL 463
Query: 403 LREYGLRETYSK 414
R ++ TY K
Sbjct: 464 FR--AMQGTYLK 473
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 98/237 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I ++ +I + K+ + A+ L M G + +T ++ YS + A + F
Sbjct: 300 DIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLF 359
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ + G D SY ++ Y +D + L EM Q + + Y L+ +
Sbjct: 360 DVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQL 419
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G A+ +F+ + G PD ++L+ + G KA+ F+ M+ L+P+
Sbjct: 420 GKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMY 479
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+++ + K LN A + +L G + T+ + G+++E R+
Sbjct: 480 TILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRK 536
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 89/215 (41%), Gaps = 2/215 (0%)
Query: 131 MKPRRADWLAVLKQLKLMEHPLYLQVAELA-LLEESFEANIRDYTKIIHGYGKKMQIQNA 189
+ P ++ LM+H + L + LA +++ + I +T +I+G K + A
Sbjct: 122 LSPNTCTLNILINCFCLMQH-VDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQA 180
Query: 190 ENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMA 249
M RG D T T ++ K G A +++ +G D +Y +++ +
Sbjct: 181 LELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDS 240
Query: 250 YVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPD 309
+ +++ + M A+ + Y +L++G + A + + I PD
Sbjct: 241 LCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPD 300
Query: 310 ARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
+LLI+ + G +A + M + G+EP+
Sbjct: 301 IVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPN 335
>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 108/236 (45%)
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA 224
E +I Y +I K Q++ A + + +M+ + + VT + M+ Y K G + A
Sbjct: 335 GIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEA 394
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
+ ++K G D+ SY +++ Y + G D ++M+ + Y AL+
Sbjct: 395 IGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDA 454
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
Y G + A +F+ ++ G+ P+ + LI+AY AG Q A + F ++AGL+P
Sbjct: 455 YGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPD 514
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+ ++ +C K + A+ L ++ + G +L + R G V+ VE
Sbjct: 515 VVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQVDNVE 570
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 93/199 (46%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ N+ Y+ +I GYGK + A MK G D+V+ ++ +Y+K G
Sbjct: 369 KNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDD 428
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A ++++ +G D +Y +++ AY + G L +M A+ + Y AL+
Sbjct: 429 ALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALID 488
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
YS G + A +F + AG+ PD + + LI++ G + A Q M +AG++P
Sbjct: 489 AYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQP 548
Query: 344 SDKCVALILSACEKENQLN 362
+ ++ A + Q++
Sbjct: 549 NIVTYNSLIDAYGRNGQVD 567
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 15/211 (7%)
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA 224
+A++ Y +I YGK+ + ++A MK G + + +T + ++ YSKAG + A
Sbjct: 440 GLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDA 499
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
F E K G D Y S++ + + G+++ VLL+EM + Y +L+
Sbjct: 500 TSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDA 559
Query: 285 YSMNG---NSEGAQ-----RVFEAIQFAGITPDARMCALLI---NAYQMAGQSQKAYTAF 333
Y NG N E A+ VF + G +C L NA G A + F
Sbjct: 560 YGRNGQVDNVEAAKGNMPINVFNKV---GDRSTEIICKTLTSQQNANDHTG-VLAAVSVF 615
Query: 334 QNMRKAGLEPSDKCVALILSACEKENQLNRA 364
M++ GL+P+ + IL+AC + + L A
Sbjct: 616 HEMQQFGLKPNVVTFSAILNACSRCSSLQEA 646
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 96/213 (45%), Gaps = 1/213 (0%)
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG-NLKM 223
F N+ Y+ ++ YG+ + + A AMK+ G + +T ++ K G +LK
Sbjct: 229 GFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKK 288
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A + FEE++ G D+ ++ S++ R + + + + EM + + Y L+
Sbjct: 289 ALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLID 348
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G E A + +++ I+P+ + +I+ Y G ++A + +M+++G+ P
Sbjct: 349 AVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRP 408
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGF 376
++ K + + AL D+ER G
Sbjct: 409 DRVSYNTLIDIYAKLGRFDDALTACKDMERVGL 441
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/239 (19%), Positives = 104/239 (43%), Gaps = 1/239 (0%)
Query: 169 NIRDYTKIIHGYGKK-MQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
N+ Y II GK + ++ A + M++ G D++T ++ + S+ + ++
Sbjct: 268 NLITYNTIIDACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRV 327
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
F E++ G D +Y +++ A + G ++ ++ M + + Y ++ GY
Sbjct: 328 FAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGK 387
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G E A ++ ++ +G+ PD LI+ Y G+ A TA ++M + GL+
Sbjct: 388 LGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVT 447
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREY 406
++ A K+ + A ++ +G + L + + G+ ++ + E+
Sbjct: 448 YNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEF 506
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 89/219 (40%)
Query: 187 QNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSM 246
++++ M+RRG D T ++ K G +++A ++L + +Y +M
Sbjct: 322 EDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTM 381
Query: 247 VMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGI 306
+ Y + G + L +M V Y L+ Y+ G + A + ++ G+
Sbjct: 382 IDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGL 441
Query: 307 TPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALE 366
D LI+AY G+ + A F M+ GL P+ + ++ A K A
Sbjct: 442 KADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATS 501
Query: 367 FLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ +R G +L + G+VE+ +L+E
Sbjct: 502 IFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQE 540
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G E A VF Q AG + + +++AY +G+ ++A FQ M+KAG +P+
Sbjct: 213 GKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITY 272
Query: 349 ALILSACEKEN-QLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
I+ AC K L +AL+ +++++G + +L A R + E+ + V E
Sbjct: 273 NTIIDACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAE 330
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 73/181 (40%), Gaps = 7/181 (3%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
E N+ Y+ +I Y K Q+A + + KR G D V + ++ K G ++
Sbjct: 474 EGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVED 533
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY-VGSEVYKALL 282
A +E+ G + +Y S++ AY R G +D E M VG + +
Sbjct: 534 AVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQVDNVEAAKGNMPINVFNKVGDRSTEIIC 593
Query: 283 RGYSMNGNSE------GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
+ + N+ A VF +Q G+ P+ + ++NA Q+A + M
Sbjct: 594 KTLTSQQNANDHTGVLAAVSVFHEMQQFGLKPNVVTFSAILNACSRCSSLQEASVLLEQM 653
Query: 337 R 337
R
Sbjct: 654 R 654
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 4/127 (3%)
Query: 254 GMLDRGEVLLREMD-AQEVYVGSEVY--KALLRGYSMNGNSEGAQRVFEAIQFAGITPDA 310
G L + E+ L + AQ+ G+ VY A++ Y +G A +VF+A++ AG P+
Sbjct: 210 GRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNL 269
Query: 311 RMCALLINAYQMAGQS-QKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLI 369
+I+A G +KA F+ M+K G+EP +++ C + + +
Sbjct: 270 ITYNTIIDACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFA 329
Query: 370 DLERDGF 376
+++R G
Sbjct: 330 EMQRRGI 336
>gi|222635128|gb|EEE65260.1| hypothetical protein OsJ_20463 [Oryza sativa Japonica Group]
Length = 1443
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 104/212 (49%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L+E+ F+ + Y +++ + K+ ++ E + + GF D +T M+ MY K G
Sbjct: 354 LVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGR 413
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L +A ++E++ +G D +Y +V + + + +L EM + + A
Sbjct: 414 LDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSA 473
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ Y+ +G + A+R F+ + +G+ PD ++++ + + +++K ++ M K G
Sbjct: 474 LICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDG 533
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLE 372
+P D ++L+A K N+ + + D+E
Sbjct: 534 YKPDDGLYQVLLAALAKGNEHDEIEGVIQDME 565
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 107/251 (42%), Gaps = 4/251 (1%)
Query: 159 LALLEESFEANIR----DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
+A+ EE + R Y ++ +G+ + Q AE + +GF D VT ++
Sbjct: 313 VAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYA 372
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
++K G+++ E EE+ G D +Y +M+ Y + G LD L EM A
Sbjct: 373 FAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPD 432
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+ Y L+ A +V E + AG+ P + LI AY +G+ A F
Sbjct: 433 AVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFD 492
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
M ++G++P ++L + ++ + + + +DG+ L A +
Sbjct: 493 RMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGN 552
Query: 395 VVEEVEHVLRE 405
+E+E V+++
Sbjct: 553 EHDEIEGVIQD 563
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 98/242 (40%), Gaps = 35/242 (14%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I + ++ E + M+ GF D V L +++MY+ GN E +
Sbjct: 886 NMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVY 945
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL------ 282
I G D+ +Y ++++ Y R + G LL EM + + E YK LL
Sbjct: 946 HSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKA 1005
Query: 283 ---------------RGYSMN--------------GNSEGAQRVFEAIQFAGITPDARMC 313
+GY +N N A+ + A++ GI P
Sbjct: 1006 KLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATM 1065
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
+L+ +Y +G +A +++ + LE S + +L A + + + L++++R
Sbjct: 1066 HILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDYSLGITKLLEMKR 1125
Query: 374 DG 375
DG
Sbjct: 1126 DG 1127
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 89/217 (41%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
++LE E + Y +I Y + + + L M +RG + +++ KA
Sbjct: 947 SILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAK 1006
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ A+ FEE++ G L++ Y M+ Y A + E LL M +
Sbjct: 1007 LWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMH 1066
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ Y +G+ + A++V +++ + + + +++AY T M++
Sbjct: 1067 ILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDYSLGITKLLEMKRD 1126
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
G+EP + + A Q + A+ L L+ GF
Sbjct: 1127 GVEPDHQVWTSFIRAASLCEQTDDAILLLKSLQDCGF 1163
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 101/249 (40%), Gaps = 5/249 (2%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK--MAE 225
A ++ + ++ Y + + +A L AM+ + D V+ ++ +K+G L +A
Sbjct: 219 ATVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVAL 278
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
E E++ G D +Y +++ A + LD + EM A E Y A++ +
Sbjct: 279 ELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVH 338
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
G ++ A+ +F+ + G PDA L+ A+ G ++ + + KAG
Sbjct: 339 GRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDG 398
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ K +L+ AL ++ G L ++ + E VL E
Sbjct: 399 ITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEE 458
Query: 406 Y---GLRET 411
GL+ T
Sbjct: 459 MADAGLKPT 467
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 88/212 (41%), Gaps = 3/212 (1%)
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
T+ +M+ ++KAG++ + + +K G + Y M+ E+++ EM
Sbjct: 854 TVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEM 913
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
+ V LL Y+ GN + V+ +I AG+ PD LI Y +
Sbjct: 914 EGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRP 973
Query: 327 QKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
++ +T M K GL P + ++L+A K +A ++ G+ + + +
Sbjct: 974 EEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMM 1033
Query: 387 AAWFKRLGVVEEVEHVL---REYGLRETYSKI 415
++ + EH+L +E G+ T + +
Sbjct: 1034 MKIYRNARNHSKAEHLLSAMKEDGIEPTIATM 1065
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 76/198 (38%), Gaps = 33/198 (16%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT ++ GK +I A L M G VT + ++ Y+K+G AE TF+ +
Sbjct: 436 YTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMV 495
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS- 291
G D+ +Y M+ + R+ + VL R M +Y+ LL + GN
Sbjct: 496 ESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALA-KGNEH 554
Query: 292 ---EGAQRVFEAIQ----------------------------FAGITPDARMCALLINAY 320
EG + EA+ G PD + +++AY
Sbjct: 555 DEIEGVIQDMEAVFEMNPLVISSILIKAECISQGASLLKRACLQGYEPDGKSLLSILDAY 614
Query: 321 QMAGQSQKAYTAFQNMRK 338
+ G+ +K + + +R+
Sbjct: 615 EKMGKHEKGLSLLEWIRQ 632
Score = 41.2 bits (95), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 93/218 (42%), Gaps = 12/218 (5%)
Query: 208 LTVMVVMYSKAGNLKMAEETFEEIKLLGEP--LDKRSYGSMVMAYVRAGMLDRGEVLLRE 265
L+ V M G LK+ ++ +K L + +D+R + +++ AY +G+ + +
Sbjct: 748 LSCRVAMIEAYGKLKLWQQAENFVKGLKQESGVDRRIWNALIHAYAESGLYEHARAIFDI 807
Query: 266 MDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQ 325
M + E ++R ++G + V + +Q I L++ A+ AG
Sbjct: 808 MIKKGPLPTVESVNGMMRALIVDGRLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAGD 867
Query: 326 SQKAYTAFQNMRKAGLEPSDKCVALILS-ACEKENQLNRALEFLI-DLERDGFMVGKEAS 383
+ + M+ AG P+ +++S C N+ R +E ++ ++E GF
Sbjct: 868 VFEVMKIYNGMKAAGYLPNMHLYRIMISLLC--HNKRFRDVELMVAEMEGAGFKPDLVVL 925
Query: 384 CTLAAWFKRLGVVE---EVEHVLREYGL---RETYSKI 415
TL + G + EV H + E GL +TY+ +
Sbjct: 926 NTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTL 963
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 36/205 (17%), Positives = 79/205 (38%), Gaps = 36/205 (17%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
+I YGK Q AEN + +K+ + D+ ++ Y+++G + A F+ + G
Sbjct: 754 MIEAYGKLKLWQQAENFVKGLKQESGV-DRRIWNALIHAYAESGLYEHARAIFDIMIKKG 812
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
S M+ A + G LD V+++E+ ++ + +L ++ G+
Sbjct: 813 PLPTVESVNGMMRALIVDGRLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAGDVFEVM 872
Query: 296 RVFEAIQFAGITPDARMCALLIN-----------------------------------AY 320
+++ ++ AG P+ + ++I+ Y
Sbjct: 873 KIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMY 932
Query: 321 QMAGQSQKAYTAFQNMRKAGLEPSD 345
G + + ++ +AGLEP +
Sbjct: 933 TGTGNFDRTIEVYHSILEAGLEPDE 957
>gi|356540375|ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Glycine max]
Length = 1476
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 97/204 (47%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I YG+ + + AE ++ +GF D VT ++ +S+ GN + + EE+
Sbjct: 359 YNAMISVYGRCARARKAEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEMV 418
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D+ +Y +++ Y + G D+ + R+M + + Y L+ E
Sbjct: 419 KRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKASKVE 478
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A V + AG+ P + LI AY AG+ ++A F MR++G++P +++L
Sbjct: 479 EAANVMSEMLDAGVKPTLHTYSALICAYAKAGKREEAEETFNCMRRSGIKPDRLAYSVML 538
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
+ N++ +A+ ++ R+GF
Sbjct: 539 DFFLRFNEMKKAMGLYHEMIREGF 562
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 92/200 (46%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +++ + ++ + + M +RGF D++T ++ MY K G A + + ++K
Sbjct: 394 YNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMK 453
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y ++ + +A ++ ++ EM V Y AL+ Y+ G E
Sbjct: 454 SSGRNPDAVTYTVLIDSLGKASKVEEAANVMSEMLDAGVKPTLHTYSALICAYAKAGKRE 513
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ F ++ +GI PD +++++ + + +KA + M + G P + +++
Sbjct: 514 EAEETFNCMRRSGIKPDRLAYSVMLDFFLRFNEMKKAMGLYHEMIREGFTPDNGLYEVMM 573
Query: 353 SACEKENQLNRALEFLIDLE 372
A +EN + + D+E
Sbjct: 574 HALVRENMWDVVDRIIRDME 593
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 112/263 (42%), Gaps = 5/263 (1%)
Query: 159 LALLEESFEANIR----DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
L LL E + IR Y +I ++ ++ A M+ D T M+ +
Sbjct: 306 LQLLNEVRRSGIRPDIITYNTLISACSRESNLEEAVAVFSDMESHRCQPDLWTYNAMISV 365
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
Y + + AEE F+E++ G D +Y S++ A+ R G ++ + EM +
Sbjct: 366 YGRCARARKAEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQD 425
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
Y ++ Y G + A +++ ++ +G PDA +LI++ A + ++A
Sbjct: 426 EMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEAANVMS 485
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
M AG++P+ + ++ A K + A E + R G + A + +F R
Sbjct: 486 EMLDAGVKPTLHTYSALICAYAKAGKREEAEETFNCMRRSGIKPDRLAYSVMLDFFLRFN 545
Query: 395 VVEEVEHVLREYGLRETYSKIPG 417
+++ + E +RE ++ G
Sbjct: 546 EMKKAMGLYHEM-IREGFTPDNG 567
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 89/214 (41%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+ S + + Y +I Y + + + + + M+ G T ++ ++K +
Sbjct: 977 DASLKPDEETYNTLIIMYCRDRRPEEGFSLMNKMRSLGLEPKLDTYRSLITAFNKQRMYE 1036
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
AEE FEE++ G LD+ Y M+ Y +G + E LL M + L+
Sbjct: 1037 QAEELFEELRSNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAIMKESGIEPTISTMHLLM 1096
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
Y +G E A+ V + ++ G+ D + +I+AY G + M++AG+E
Sbjct: 1097 VSYGKSGQPEEAENVLKNLRTTGVVLDTLPYSSVIDAYLKKGDFKAGIEKLTEMKEAGIE 1156
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
P + + A N A+ L L+ GF
Sbjct: 1157 PDHRIWTCFIRAATLSEGTNEAIVLLNALQDAGF 1190
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 105/254 (41%), Gaps = 2/254 (0%)
Query: 154 LQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVV 213
L V A E S ++ Y ++ Y + + + L M+ RG + D V+ ++
Sbjct: 233 LAVEIFARAESSVGDTVQVYNAMMGVYARNGRFSKVKELLDLMRERGCVPDLVSFNTLIN 292
Query: 214 MYSKAGNLK--MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
K+G ++ +A + E++ G D +Y +++ A R L+ + +M++
Sbjct: 293 ARMKSGAMEPNLALQLLNEVRRSGIRPDIITYNTLISACSRESNLEEAVAVFSDMESHRC 352
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
Y A++ Y + A+ +F+ ++ G PDA L+ A+ G ++K
Sbjct: 353 QPDLWTYNAMISVYGRCARARKAEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRD 412
Query: 332 AFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFK 391
+ M K G + I+ K+ + ++A++ D++ G L
Sbjct: 413 ICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLG 472
Query: 392 RLGVVEEVEHVLRE 405
+ VEE +V+ E
Sbjct: 473 KASKVEEAANVMSE 486
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/177 (19%), Positives = 77/177 (43%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
E + Y +I + K+ + AE ++ G+ D+ +M+ Y +G+ + AE
Sbjct: 1015 LEPKLDTYRSLITAFNKQRMYEQAEELFEELRSNGYKLDRAFYHLMMKTYRTSGDHRKAE 1074
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+K G + ++++Y ++G + E +L+ + V + + Y +++ Y
Sbjct: 1075 NLLAIMKESGIEPTISTMHLLMVSYGKSGQPEEAENVLKNLRTTGVVLDTLPYSSVIDAY 1134
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G+ + ++ AGI PD R+ I A ++ + +A ++ AG +
Sbjct: 1135 LKKGDFKAGIEKLTEMKEAGIEPDHRIWTCFIRAATLSEGTNEAIVLLNALQDAGFD 1191
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 62/140 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ Y + AEN L MK G T+ +++V Y K+G + AE + ++
Sbjct: 1057 YHLMMKTYRTSGDHRKAENLLAIMKESGIEPTISTMHLLMVSYGKSGQPEEAENVLKNLR 1116
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G LD Y S++ AY++ G G L EM + ++ +R +++ +
Sbjct: 1117 TTGVVLDTLPYSSVIDAYLKKGDFKAGIEKLTEMKEAGIEPDHRIWTCFIRAATLSEGTN 1176
Query: 293 GAQRVFEAIQFAGITPDARM 312
A + A+Q AG R+
Sbjct: 1177 EAIVLLNALQDAGFDLPIRL 1196
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 42/219 (19%), Positives = 94/219 (42%), Gaps = 3/219 (1%)
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G + ++ + + +++AGNL ++ + +K G Y M+ + +
Sbjct: 874 GLKISKSSILLTLEAFAQAGNLFEVQKIYNGMKAAGYFPTMHVYRIMLRLLCKCKRVRDV 933
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
E +L EM+ ++ ++L+ Y + + +++ IQ A + PD LI
Sbjct: 934 ETMLCEMEEAGFQPDLQICNSILKLYLGIEDFKSMGIIYQKIQDASLKPDEETYNTLIIM 993
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
Y + ++ ++ MR GLEP +++A K+ +A E +L +G+ +
Sbjct: 994 YCRDRRPEEGFSLMNKMRSLGLEPKLDTYRSLITAFNKQRMYEQAEELFEELRSNGYKLD 1053
Query: 380 KEASCTLAAWFKRLGVVEEVEHVL---REYGLRETYSKI 415
+ + ++ G + E++L +E G+ T S +
Sbjct: 1054 RAFYHLMMKTYRTSGDHRKAENLLAIMKESGIEPTISTM 1092
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 78/184 (42%), Gaps = 2/184 (1%)
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE--VY 278
+A + F +++ G + Y MV Y R + + LL + + + ++ VY
Sbjct: 718 FDVASQIFSDMRFNGVESSECLYQGMVSVYCRMDLPETAHHLLYHAEKNGIILDNDISVY 777
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
++ Y + A+ + +++ D ++ LI+AY +G ++A F M +
Sbjct: 778 IDIVETYGKLKIWQKAESLVGSLRQRCSKMDRKVWNALIHAYAFSGCYERARAIFNTMMR 837
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
G P+ V +L A + +LN + +L+ G + K + F + G + E
Sbjct: 838 DGPSPTVDSVNGLLQALIVDRRLNELYVVIQELQDMGLKISKSSILLTLEAFAQAGNLFE 897
Query: 399 VEHV 402
V+ +
Sbjct: 898 VQKI 901
>gi|302794911|ref|XP_002979219.1| hypothetical protein SELMODRAFT_110655 [Selaginella moellendorffii]
gi|300152987|gb|EFJ19627.1| hypothetical protein SELMODRAFT_110655 [Selaginella moellendorffii]
Length = 1143
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 111/231 (48%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ ++ Q++ A + M++ G CD V +++++ YSKAG ++ A+ +
Sbjct: 795 YSSMVGALINCNQLEKAAGLVEKMRQIGLKCDSVLVSILLNAYSKAGLVEDADALIHMAR 854
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G PLD +Y +++ A +RAG L + + + + Y ++ ++ +G +
Sbjct: 855 GDGIPLDIVAYNTIIKADLRAGRLKKAIDTYSSLTNLGLRPSLQTYDTMISVFAKSGRTR 914
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+++F+ ++ AG PD ++ + ++N Y +G + A F+ M+ GL P + ++
Sbjct: 915 DAEKMFKDLKSAGFQPDEKVYSQMMNCYAKSGMYEHAADLFEAMKLRGLRPHEVSYNNLI 974
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
A + Q +A + L+++ + G L + + G E E+ L
Sbjct: 975 DAYARAGQFAKAEQLLVEMAKAGCPPSSVTFLLLISAYAHRGKCNEAENAL 1025
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+++ Y +I + K + ++AE +K GF D+ + M+ Y+K+G + A + F
Sbjct: 896 SLQTYDTMISVFAKSGRTRDAEKMFKDLKSAGFQPDEKVYSQMMNCYAKSGMYEHAADLF 955
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E +KL G + SY +++ AY RAG + E LL EM S + L+ Y+
Sbjct: 956 EAMKLRGLRPHEVSYNNLIDAYARAGQFAKAEQLLVEMAKAGCPPSSVTFLLLISAYAHR 1015
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G A+ E +Q A I P R ++ A+ A +A ++ M ++G++P
Sbjct: 1016 GKCNEAENALERMQTAAIRPTVRHYNEVMLAFSRARLPSQAMESYLKMERSGIQP 1070
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I Y II + +++ A +T ++ G T M+ +++K+G + AE+ F
Sbjct: 861 DIVAYNTIIKADLRAGRLKKAIDTYSSLTNLGLRPSLQTYDTMISVFAKSGRTRDAEKMF 920
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+++K G D++ Y M+ Y ++GM + L M + + Y L+ Y+
Sbjct: 921 KDLKSAGFQPDEKVYSQMMNCYAKSGMYEHAADLFEAMKLRGLRPHEVSYNNLIDAYARA 980
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G A+++ + AG P + LLI+AY G+ +A A + M+ A + P+ +
Sbjct: 981 GQFAKAEQLLVEMAKAGCPPSSVTFLLLISAYAHRGKCNEAENALERMQTAAIRPTVRHY 1040
Query: 349 ALILSACEKENQLNRALEFLIDLERDGF 376
++ A + ++A+E + +ER G
Sbjct: 1041 NEVMLAFSRARLPSQAMESYLKMERSGI 1068
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 113/251 (45%), Gaps = 14/251 (5%)
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL 221
L+ S+ ++ Y+ ++ YG+ QI AE M + D+V + M++ Y+ A
Sbjct: 268 LQLSYIPSVIVYSMLLKVYGRDKQIGLAEAAFQEMLDQKLDPDEVAFSTMILNYANA--- 324
Query: 222 KMAEETFEEIKLLGEPLDKR-------SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
E F+E+ + E + R +Y +M++ +A L +L ++ + V +
Sbjct: 325 ----EMFDEMLTMYEAMMSRGIVPSSVTYTTMLIHLNKAERLADAALLWEDLVEESVELS 380
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
Y ++ Y G E A VFEA+ AG PD+ + ++++ G+ +A F
Sbjct: 381 PLAYALMITIYRKLGRFEEALEVFEAMLGAGYYPDSLIYNMVLHMLGKLGRYDEAVDVFT 440
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
M++ L S A +L CEK ++ A D++ V + ++ + + + G
Sbjct: 441 AMQRQELCTSKYSYATMLHICEKADKFELAASIFSDMQMKRCPVDEVVYTSVISIYGKAG 500
Query: 395 VVEEVEHVLRE 405
+ +E E + +E
Sbjct: 501 LYDEAEKLFQE 511
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 102/246 (41%), Gaps = 5/246 (2%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
ESF + Y ++ + K Q+ AE M+ +GF + TL ++ Y KAG ++
Sbjct: 721 ESFTLDSAAYNQLTINFLKAGQVPPAEMLHSRMQDKGFDVEDSTLGHLIAAYGKAGRYEV 780
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
+ E+ P + Y SMV A + L++ L+ +M + S + LL
Sbjct: 781 LTKLKPEL-----PRNNFVYSSMVGALINCNQLEKAAGLVEKMRQIGLKCDSVLVSILLN 835
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
YS G E A + + GI D +I A AG+ +KA + ++ GL P
Sbjct: 836 AYSKAGLVEDADALIHMARGDGIPLDIVAYNTIIKADLRAGRLKKAIDTYSSLTNLGLRP 895
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
S + ++S K + A + DL+ GF ++ + + + G+ E +
Sbjct: 896 SLQTYDTMISVFAKSGRTRDAEKMFKDLKSAGFQPDEKVYSQMMNCYAKSGMYEHAADLF 955
Query: 404 REYGLR 409
LR
Sbjct: 956 EAMKLR 961
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 88/188 (46%), Gaps = 1/188 (0%)
Query: 154 LQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVV 213
L+V E A+L + + Y ++H GK + A + AM+R+ + + M+
Sbjct: 401 LEVFE-AMLGAGYYPDSLIYNMVLHMLGKLGRYDEAVDVFTAMQRQELCTSKYSYATMLH 459
Query: 214 MYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYV 273
+ KA ++A F ++++ P+D+ Y S++ Y +AG+ D E L +EM+ + V
Sbjct: 460 ICEKADKFELAASIFSDMQMKRCPVDEVVYTSVISIYGKAGLYDEAEKLFQEMNELRLLV 519
Query: 274 GSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAF 333
+ + + G A +V E + G+ D L++ Y AG ++A F
Sbjct: 520 DVKTFSVMANVRLKAGKYNEAVQVMEELLAKGLNLDDTAWKTLLHCYVKAGNVERATKTF 579
Query: 334 QNMRKAGL 341
+ + ++G+
Sbjct: 580 KTLVESGI 587
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 74/191 (38%), Gaps = 34/191 (17%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I YGK AE M + D T +VM + KAG A + EE+
Sbjct: 489 YTSVISIYGKAGLYDEAEKLFQEMNELRLLVDVKTFSVMANVRLKAGKYNEAVQVMEELL 548
Query: 233 LLGEPLDKRSYGSMVMAYVRAG----------------------------------MLDR 258
G LD ++ +++ YV+AG ML+
Sbjct: 549 AKGLNLDDTAWKTLLHCYVKAGNVERATKTFKTLVESGIADLMAYNDMLSLYAEFDMLED 608
Query: 259 GEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLIN 318
++L +++ + + + +++ Y A+ V ++ G TPD +LIN
Sbjct: 609 AKLLFQQLKSSSIQPDQVWFGTMVKLYCNANMVAAAEEVLRQMREKGFTPDHITQGILIN 668
Query: 319 AYQMAGQSQKA 329
AY A + ++A
Sbjct: 669 AYGEANRIEEA 679
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 64/144 (44%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F+ + + Y+++++ Y K ++A + AMK RG +V+ ++ Y++AG AE
Sbjct: 928 FQPDEKVYSQMMNCYAKSGMYEHAADLFEAMKLRGLRPHEVSYNNLIDAYARAGQFAKAE 987
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+ E+ G P ++ ++ AY G + E L M + Y ++ +
Sbjct: 988 QLLVEMAKAGCPPSSVTFLLLISAYAHRGKCNEAENALERMQTAAIRPTVRHYNEVMLAF 1047
Query: 286 SMNGNSEGAQRVFEAIQFAGITPD 309
S A + ++ +GI PD
Sbjct: 1048 SRARLPSQAMESYLKMERSGIQPD 1071
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 97/224 (43%), Gaps = 7/224 (3%)
Query: 183 KMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRS 242
K ++ + LL F D + + + KAG + AE ++ G ++ +
Sbjct: 705 KFRLFDKATLLLHRVLESFTLDSAAYNQLTINFLKAGQVPPAEMLHSRMQDKGFDVEDST 764
Query: 243 YGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS-EGAQRVFEAI 301
G ++ AY +AG R EVL + E+ + VY +++ G +N N E A + E +
Sbjct: 765 LGHLIAAYGKAG---RYEVLTKL--KPELPRNNFVYSSMV-GALINCNQLEKAAGLVEKM 818
Query: 302 QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQL 361
+ G+ D+ + ++L+NAY AG + A R G+ I+ A + +L
Sbjct: 819 RQIGLKCDSVLVSILLNAYSKAGLVEDADALIHMARGDGIPLDIVAYNTIIKADLRAGRL 878
Query: 362 NRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+A++ L G + T+ + F + G + E + ++
Sbjct: 879 KKAIDTYSSLTNLGLRPSLQTYDTMISVFAKSGRTRDAEKMFKD 922
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 75/195 (38%)
Query: 210 VMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQ 269
+M+ +Y K G + A E FE + G D Y ++ + G D + M Q
Sbjct: 386 LMITIYRKLGRFEEALEVFEAMLGAGYYPDSLIYNMVLHMLGKLGRYDEAVDVFTAMQRQ 445
Query: 270 EVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
E+ Y +L E A +F +Q D + +I+ Y AG +A
Sbjct: 446 ELCTSKYSYATMLHICEKADKFELAASIFSDMQMKRCPVDEVVYTSVISIYGKAGLYDEA 505
Query: 330 YTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAW 389
FQ M + L K +++ + K + N A++ + +L G + A TL
Sbjct: 506 EKLFQEMNELRLLVDVKTFSVMANVRLKAGKYNEAVQVMEELLAKGLNLDDTAWKTLLHC 565
Query: 390 FKRLGVVEEVEHVLR 404
+ + G VE +
Sbjct: 566 YVKAGNVERATKTFK 580
>gi|225456631|ref|XP_002266698.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74750
[Vitis vinifera]
Length = 875
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 5/204 (2%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
+Y ++ E L ++F Y+ II+ GK + +A M +G + + VT +M
Sbjct: 471 MYQKMQEAHLSPDTFT-----YSVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIM 525
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ + +KA N A E + +++ G DK +Y ++ G L+ E + EM +
Sbjct: 526 IALQAKARNYPTALELYRDMQNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNW 585
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
VY L+ + GN E + ++A+ AG+ P+ C L++A+ + AY
Sbjct: 586 VPDEPVYGLLVDLWGKVGNVEKSWEWYQAMLNAGLCPNVPTCNSLLSAFLRVHRLSDAYN 645
Query: 332 AFQNMRKAGLEPSDKCVALILSAC 355
Q+M + GL+PS + L+LS C
Sbjct: 646 LLQSMLRLGLQPSLQTYTLLLSCC 669
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 112/259 (43%), Gaps = 4/259 (1%)
Query: 141 VLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLA-MKRR 199
VLKQ++ +HP+ L + F+ + YT ++ G+ Q A N LLA M R
Sbjct: 352 VLKQIQ--DHPVALGFFYWLKRQTGFKHDGHTYTTMVGILGRARQF-GAINKLLAEMVRD 408
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G + VT ++ Y +A L A F+ ++ G D+ +Y +++ + +AG LD
Sbjct: 409 GCQPNVVTYNRLIHSYGRANYLNEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVA 468
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+ ++M + + Y ++ G+ A ++F + G P+ ++I
Sbjct: 469 LHMYQKMQEAHLSPDTFTYSVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIAL 528
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
A A +++M+ AG +P ++++ L A +++R ++
Sbjct: 529 QAKARNYPTALELYRDMQNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPD 588
Query: 380 KEASCTLAAWFKRLGVVEE 398
+ L + ++G VE+
Sbjct: 589 EPVYGLLVDLWGKVGNVEK 607
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/245 (19%), Positives = 104/245 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + + N+ Y ++IH YG+ + A + M+ G D+VT ++ +++KAG
Sbjct: 405 MVRDGCQPNVVTYNRLIHSYGRANYLNEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGF 464
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L +A +++++ D +Y ++ +AG L L EM Q Y
Sbjct: 465 LDVALHMYQKMQEAHLSPDTFTYSVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNI 524
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ + N A ++ +Q AG PD ++++ G ++A F M++
Sbjct: 525 MIALQAKARNYPTALELYRDMQNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKN 584
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
P + L++ K + ++ E+ + G +L + F R+ + +
Sbjct: 585 WVPDEPVYGLLVDLWGKVGNVEKSWEWYQAMLNAGLCPNVPTCNSLLSAFLRVHRLSDAY 644
Query: 401 HVLRE 405
++L+
Sbjct: 645 NLLQS 649
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 83/209 (39%)
Query: 197 KRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGML 256
++ GF D T T MV + +A + E+ G + +Y ++ +Y RA L
Sbjct: 371 RQTGFKHDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLIHSYGRANYL 430
Query: 257 DRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALL 316
+ + M Y L+ ++ G + A +++ +Q A ++PD +++
Sbjct: 431 NEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVI 490
Query: 317 INAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
IN AG A+ F M G P+ ++++ K ALE D++ GF
Sbjct: 491 INCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAGF 550
Query: 377 MVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
K + G +EE E + E
Sbjct: 551 QPDKVTYSIVMEVLGHCGHLEEAEAIFTE 579
>gi|15224262|ref|NP_179484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099137|sp|O64624.1|PP163_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g18940
gi|3004555|gb|AAC09028.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|15983785|gb|AAL10489.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|38564280|gb|AAR23719.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|330251736|gb|AEC06830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 102/210 (48%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M+ +G D+ T + ++ ++ G L+ A+E F E+K G +Y +++ + +AG+
Sbjct: 272 MRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGV 331
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
+L+EM+ S Y L+ Y G S+ A V E + G+ P+A
Sbjct: 332 YTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTT 391
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+I+AY AG+ +A F +M++AG P+ +LS K+++ N ++ L D++ +G
Sbjct: 392 VIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNG 451
Query: 376 FMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ T+ A G+ + V V RE
Sbjct: 452 CSPNRATWNTMLALCGNKGMDKFVNRVFRE 481
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 84/196 (42%), Gaps = 18/196 (9%)
Query: 212 VVMYSKAGNLKMAEETFE-EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE 270
+V+ S +G LK+ + E +++LG R LL ++ QE
Sbjct: 162 LVLSSNSGALKLDHQVIEIFVRILG----------------RESQYSVAAKLLDKIPLQE 205
Query: 271 VYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS-QKA 329
+ Y +L YS G E A +FE ++ G +P ++++ + G+S +K
Sbjct: 206 YLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKI 265
Query: 330 YTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAW 389
MR GL+ + + +LSAC +E L A EF +L+ G+ G L
Sbjct: 266 LGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQV 325
Query: 390 FKRLGVVEEVEHVLRE 405
F + GV E VL+E
Sbjct: 326 FGKAGVYTEALSVLKE 341
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 100/227 (44%), Gaps = 4/227 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG-NLKMAEET 227
++R YT I+H Y + + + A + MK G VT V++ ++ K G + +
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGV 268
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
+E++ G D+ + +++ A R G+L + E+ + G+ Y ALL+ +
Sbjct: 269 LDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGK 328
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G A V + ++ D+ L+ AY AG S++A + M K G+ P+
Sbjct: 329 AGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAIT 388
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
++ A K + + AL+ ++ G + +CT A LG
Sbjct: 389 YTTVIDAYGKAGKEDEALKLFYSMKEAGCVPN---TCTYNAVLSLLG 432
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/244 (19%), Positives = 110/244 (45%), Gaps = 12/244 (4%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN---LK 222
F A + Y +++ +K ++ EN + MK +GF + + ++M+ Y+K GN ++
Sbjct: 522 FNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIE 581
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGML---DRGEVLLREMDAQEVYVGSEVYK 279
E +E ++ + R ++++A + L +R L ++ + V ++
Sbjct: 582 RIENRIKEGQIFPSWMLLR---TLLLANFKCRALAGSERAFTLFKKHGYKPDMV---IFN 635
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
++L ++ N + A+ + E+I+ G++PD L++ Y G+ KA + + K+
Sbjct: 636 SMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKS 695
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEV 399
L+P ++ + + A+ L ++ G T + + +G+ E+
Sbjct: 696 QLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEI 755
Query: 400 EHVL 403
E V+
Sbjct: 756 EDVI 759
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/183 (19%), Positives = 77/183 (42%)
Query: 186 IQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGS 245
+ +E K+ G+ D V M+ ++++ AE E I+ G D +Y S
Sbjct: 612 LAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNS 671
Query: 246 MVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAG 305
++ YVR G + E +L+ ++ ++ Y +++G+ G + A R+ + G
Sbjct: 672 LMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERG 731
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
I P ++ Y G + + M K P++ +++ + + + A+
Sbjct: 732 IRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAM 791
Query: 366 EFL 368
+F+
Sbjct: 792 DFV 794
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/246 (19%), Positives = 98/246 (39%), Gaps = 3/246 (1%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E S A+ Y +++ Y + + A + M ++G + + +T T ++ Y KAG
Sbjct: 344 ENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKED 403
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A + F +K G + +Y +++ + + +L +M + + +L
Sbjct: 404 EALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML 463
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G + RVF ++ G PD LI+AY G A + M +AG
Sbjct: 464 ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFN 523
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGV---VEEV 399
+L+A ++ + D++ GF + + + + + G +E +
Sbjct: 524 ACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERI 583
Query: 400 EHVLRE 405
E+ ++E
Sbjct: 584 ENRIKE 589
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 67/166 (40%), Gaps = 14/166 (8%)
Query: 178 HGYGKKMQIQN--------------AENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
HGY M I N AE L +++ G D VT ++ MY + G
Sbjct: 625 HGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWK 684
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
AEE + ++ D SY +++ + R G++ +L EM + + Y +
Sbjct: 685 AEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVS 744
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
GY+ G + V E + P+ ++++ Y AG+ +A
Sbjct: 745 GYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEA 790
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 51/273 (18%), Positives = 103/273 (37%)
Query: 133 PRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENT 192
P RA W +L ++ + FE + + +I YG+ +A
Sbjct: 454 PNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKM 513
Query: 193 LLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVR 252
M R GF T ++ ++ G+ + E ++K G + SY M+ Y +
Sbjct: 514 YGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAK 573
Query: 253 AGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARM 312
G E + + +++ + + LL G++R F + G PD +
Sbjct: 574 GGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVI 633
Query: 313 CALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLE 372
+++ + +A +++R+ GL P ++ + + +A E L LE
Sbjct: 634 FNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLE 693
Query: 373 RDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ + T+ F R G+++E +L E
Sbjct: 694 KSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSE 726
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/238 (18%), Positives = 87/238 (36%), Gaps = 35/238 (14%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKL 233
+ ++ ++ ++ A+ +K G+ VT ++ ++ KAG A +E++
Sbjct: 285 STVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEE 344
Query: 234 LGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEG 293
P D +Y +V AYVRAG ++ M + V + Y ++ Y G +
Sbjct: 345 NSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDE 404
Query: 294 AQRVFEAIQFAGITPDA---------------------RMCALLINAYQ----------- 321
A ++F +++ AG P+ +C + N
Sbjct: 405 ALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLA 464
Query: 322 ---MAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
G + F+ M+ G EP ++SA + A + ++ R GF
Sbjct: 465 LCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGF 522
>gi|356512664|ref|XP_003525037.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74750-like [Glycine max]
Length = 873
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 102/220 (46%), Gaps = 6/220 (2%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
+Y ++ E L ++F Y+ II+ GK + A M G + + VT +M
Sbjct: 469 MYKRMQEAGLSPDTFT-----YSVIINCLGKAGNLAAAHWLFCEMVEHGCVPNLVTYNIM 523
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ + +KA N +MA + + +++ G DK +Y ++ A G L+ E + EM +
Sbjct: 524 IALQAKARNYEMALKLYHDMQNAGFQPDKVTYSIVMEALGHCGYLEEAESVFVEMQQKNW 583
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
VY L+ + GN E A ++A+ AG+ P+ C L++A+ + AY
Sbjct: 584 VPDEPVYGLLVDLWGKAGNVEKASEWYQAMLNAGLLPNVPTCNSLLSAFLRLHRLPDAYN 643
Query: 332 AFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDL 371
Q+M GL PS + L+LS C E Q + F +L
Sbjct: 644 LVQSMVALGLRPSLQTYTLLLSCC-TEAQPAHDMGFFCEL 682
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 116/259 (44%), Gaps = 6/259 (2%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++++ + N+ Y ++IH YG ++ A N M+ G D+VT ++ +++KAG
Sbjct: 403 MVKDGCQPNVVTYNRLIHCYGCANYLKEALNVFNEMQEVGCEPDRVTYCTLIDIHAKAGF 462
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ +A ++ ++ G D +Y ++ +AG L L EM Y
Sbjct: 463 IDVAMSMYKRMQEAGLSPDTFTYSVIINCLGKAGNLAAAHWLFCEMVEHGCVPNLVTYNI 522
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ + N E A +++ +Q AG PD ++++ A G ++A + F M++
Sbjct: 523 MIALQAKARNYEMALKLYHDMQNAGFQPDKVTYSIVMEALGHCGYLEEAESVFVEMQQKN 582
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
P + L++ K + +A E+ + G + +L + F RL + +
Sbjct: 583 WVPDEPVYGLLVDLWGKAGNVEKASEWYQAMLNAGLLPNVPTCNSLLSAFLRLHRLPDAY 642
Query: 401 HVLRE---YGLR---ETYS 413
++++ GLR +TY+
Sbjct: 643 NLVQSMVALGLRPSLQTYT 661
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/236 (18%), Positives = 97/236 (41%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+ F + YT ++ G+ + + L M + G + VT ++ Y A LK
Sbjct: 370 QPGFRHDGHTYTTMVGILGRARRFDSISKLLEQMVKDGCQPNVVTYNRLIHCYGCANYLK 429
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A F E++ +G D+ +Y +++ + +AG +D + + M + + Y ++
Sbjct: 430 EALNVFNEMQEVGCEPDRVTYCTLIDIHAKAGFIDVAMSMYKRMQEAGLSPDTFTYSVII 489
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
GN A +F + G P+ ++I A + A + +M+ AG +
Sbjct: 490 NCLGKAGNLAAAHWLFCEMVEHGCVPNLVTYNIMIALQAKARNYEMALKLYHDMQNAGFQ 549
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
P ++++ A L A +++++ ++ + L + + G VE+
Sbjct: 550 PDKVTYSIVMEALGHCGYLEEAESVFVEMQQKNWVPDEPVYGLLVDLWGKAGNVEK 605
>gi|302826103|ref|XP_002994591.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
gi|300137362|gb|EFJ04342.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
Length = 599
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 125/304 (41%), Gaps = 26/304 (8%)
Query: 137 DWLAVLKQLKLMEHPL----------YLQVAELALLEESFEA--------NIRDYTKIIH 178
+W ++ ++++ P+ Y + + +FEA N+ YT +IH
Sbjct: 1 NWHKIVNAFQVIDKPVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIH 60
Query: 179 GYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPL 238
Y + ++ A M +G ++ ++ Y+ AGN + AE FE+ K
Sbjct: 61 AYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVP 120
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
Y S+V AY +AG ++ E LL +M+ + +Y +L G++ + E F
Sbjct: 121 GGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFF 180
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
++ G++P A ++ + AG KA + M K G+ P+ A+I+ +
Sbjct: 181 HRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARG 240
Query: 359 NQLNRALEFLIDLERDG-------FMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRET 411
A + D+ G + + A C K LGV+E +E R ET
Sbjct: 241 GDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIE-ANRLLPTIET 299
Query: 412 YSKI 415
Y+ I
Sbjct: 300 YTSI 303
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 109/243 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + +I Y ++H + K ++ A L ++ + T T ++ Y K GN
Sbjct: 253 MVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGN 312
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ A E F+ IK G SY S++ +A ++ ++L EM A V Y A
Sbjct: 313 IQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNERSYTA 372
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L GY+ G+ E A +F+ ++ + D L+ A +G Q+A FQ + AG
Sbjct: 373 LTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQQITDAG 432
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
L+ + +L ++ +L++A + L D+++ GF + + R G EEV
Sbjct: 433 LKHNRITYCTMLDGWARKGELSKARDLLNDMQKHGFHLDTICYTSFIKACFRSGDTEEVT 492
Query: 401 HVL 403
L
Sbjct: 493 ETL 495
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 94/207 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y I+ Y + ++ E L M+ GF + T ++ +++ + + F +K
Sbjct: 125 YNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLK 184
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G +YG +V + +AG + + +L EMD V +Y ++ GY+ G+
Sbjct: 185 ACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFT 244
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +V+E + AG+ PD + +L++A+ AG+ KA +N+ L P+ + IL
Sbjct: 245 AAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSIL 304
Query: 353 SACEKENQLNRALEFLIDLERDGFMVG 379
K + +ALE ++ G G
Sbjct: 305 DGYVKGGNIQKALEVFDRIKTAGLRPG 331
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 107/268 (39%), Gaps = 35/268 (13%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y I+ + K + A + L M + G +++ +++ Y++ G+ A + +E++
Sbjct: 195 YGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMV 254
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D Y +V A+ +AG +D+ +L ++A + E Y ++L GY GN +
Sbjct: 255 SAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQ 314
Query: 293 GAQRVFEAIQFAG-----------------------------------ITPDARMCALLI 317
A VF+ I+ AG + P+ R L
Sbjct: 315 KALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNERSYTALT 374
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
Y AG +KA+ FQ M+K L +L AC K + RA E + G
Sbjct: 375 EGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQQITDAGLK 434
Query: 378 VGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ CT+ + R G + + +L +
Sbjct: 435 HNRITYCTMLDGWARKGELSKARDLLND 462
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 86/194 (44%), Gaps = 3/194 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N R YT + GY + ++ A MK+ D V ++ K+G ++ A E F
Sbjct: 366 NERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVF 425
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++I G ++ +Y +M+ + R G L + LL +M ++ + Y + ++ +
Sbjct: 426 QQITDAGLKHNRITYCTMLDGWARKGELSKARDLLNDMQKHGFHLDTICYTSFIKACFRS 485
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS---D 345
G++E ++ + +AR LI+ + A +A + ++ + +GL+
Sbjct: 486 GDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKASGLQLDSALS 545
Query: 346 KCVALILSACEKEN 359
C+ L +C +N
Sbjct: 546 NCLLSGLISCASQN 559
>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Brachypodium distachyon]
Length = 877
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 106/250 (42%), Gaps = 3/250 (1%)
Query: 154 LQVAELALLEES---FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTV 210
+Q AE L E + N+ YT +IHG+ + ++ A N L+ M RG D VT
Sbjct: 415 VQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGA 474
Query: 211 MVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE 270
++ AG + A E++ D Y ++ + ML L+ EM Q
Sbjct: 475 LIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQN 534
Query: 271 VYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAY 330
V+ VY L+ G+ N + + A+++FE ++ GI PD +I Y G +A
Sbjct: 535 VHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAV 594
Query: 331 TAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWF 390
MRK G P + ++ K+ ++ AL L D+ + A +L +
Sbjct: 595 ECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGY 654
Query: 391 KRLGVVEEVE 400
+LG + E
Sbjct: 655 CKLGDTDAAE 664
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 85/189 (44%), Gaps = 4/189 (2%)
Query: 161 LLEESFEANIRD----YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS 216
L+EE E N+ YT +I G+ + + A M+++G D V M+ Y
Sbjct: 526 LIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYC 585
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
+ G + A E ++ +G D+ +Y +++ Y + G + LL +M +
Sbjct: 586 QFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVV 645
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
Y +L+ GY G+++ A+ +F +++ G+ P+ +LI + + +A F+ M
Sbjct: 646 AYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYM 705
Query: 337 RKAGLEPSD 345
P+D
Sbjct: 706 LLNQCSPND 714
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 9/217 (4%)
Query: 155 QVAELALLEESF-------EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVT 207
QV+E L+ E +ANI Y +I G KK + A N + M + D+
Sbjct: 484 QVSEALLVREKMAARQLLPDANI--YNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYV 541
Query: 208 LTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMD 267
T ++ + + +L A + FE ++ G D Y +M+ Y + GM++ + M
Sbjct: 542 YTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMR 601
Query: 268 AQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQ 327
Y L+ GY+ GN GA + + P+ + LIN Y G +
Sbjct: 602 KVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTD 661
Query: 328 KAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
A F +M GL P+ +++ + K++++ RA
Sbjct: 662 AAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRA 698
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 45/231 (19%), Positives = 87/231 (37%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ G+K ++ + L M+ R + ++ K + A +++
Sbjct: 332 YGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMF 391
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D ++ +++ + G + E LLRE E+ Y +L+ G+ + G
Sbjct: 392 AGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVI 451
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + G TPD LI+ +AGQ +A + M L P +++
Sbjct: 452 VASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLI 511
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
S K+ L A + ++ K TL F R ++E +
Sbjct: 512 SGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIF 562
>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1016
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 135/302 (44%), Gaps = 18/302 (5%)
Query: 121 SDLLAAWVRFMKPRRA-DWLAVLKQLKLMEHPL--------YLQVAEL----ALLEE--- 164
+ L+ + KP+ A D L +L L+ + + Y +V ++ +LL+E
Sbjct: 347 TTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEE 406
Query: 165 -SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
N+ Y+ II+GY KK + A N + M + I + +++ Y KAG ++
Sbjct: 407 KHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEI 466
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A + + E+KL G ++ + +V R +D E LL+++ ++ + + Y +L+
Sbjct: 467 ATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMD 526
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G+ G A + E + I D +LIN G+ + A + + M + GL P
Sbjct: 527 GFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYE-AKSVYSGMIEMGLAP 585
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+ +++ A K+ +L+ ALE +++ M TL G +E+ +VL
Sbjct: 586 NQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVL 645
Query: 404 RE 405
E
Sbjct: 646 NE 647
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 97/196 (49%)
Query: 199 RGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDR 258
RG D V T +V K+ K AE+ F + L + +Y +++ Y + G ++R
Sbjct: 337 RGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMER 396
Query: 259 GEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLIN 318
E LL+EM+ + + Y +++ GY+ G + A V + + I P+A + A+LI+
Sbjct: 397 VESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILID 456
Query: 319 AYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMV 378
Y AG+ + A + M+ +GL+ ++ ++++ ++ +++ A E L D+ G ++
Sbjct: 457 GYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLL 516
Query: 379 GKEASCTLAAWFKRLG 394
+L F + G
Sbjct: 517 DHVNYTSLMDGFFKAG 532
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 102/241 (42%), Gaps = 22/241 (9%)
Query: 181 GKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDK 240
GK+M AE L + RG + D V T ++ + KAG A EE+ P D
Sbjct: 496 GKRMD--EAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDV 553
Query: 241 RSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG---------SEVYKALLRGYSMNGNS 291
+Y ++ G+L+ G+ +A+ VY G Y +++ Y G
Sbjct: 554 VTYNVLI-----NGLLEHGK-----YEAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGEL 603
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALI 351
+ A ++ ++ I P + C L+ AG+ +KA M G+ P+ ++
Sbjct: 604 DNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVL 663
Query: 352 LSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRET 411
L+A K + N L+ L G + +EA L F RL + ++ VL+ Y +R+
Sbjct: 664 LNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLK-YMIRDG 722
Query: 412 Y 412
+
Sbjct: 723 F 723
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 116/264 (43%), Gaps = 13/264 (4%)
Query: 154 LQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVV 213
LQ+ E L++ + N Y +I + + + A + L M R GF+ D VT ++
Sbjct: 677 LQMHE-QLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIR 735
Query: 214 MYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYV 273
Y ++ ++K A T+ ++ G + +Y ++ + AG++ + L +M +
Sbjct: 736 GYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNP 795
Query: 274 GSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAF 333
+ Y L+ GY GN + + R++ + G P +LI+ + G+ +A
Sbjct: 796 DASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELL 855
Query: 334 QNMRKAGLEPSDKCVALILSA-CE--KENQLNRALE---------FLIDLERDGFMVGKE 381
M+ G+ PS +++ C K L+R L+ + ++ GF+ K
Sbjct: 856 NEMQVRGVPPSSSTYDILICGWCNLSKHPDLDRTLKKIYRTDAKNLITEMNDKGFVPCKS 915
Query: 382 ASCTLAAWFKRLGVVEEVEHVLRE 405
+++ F R G + + E +L+E
Sbjct: 916 TIACISSTFARPGKMLDAEKLLKE 939
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 111/280 (39%), Gaps = 35/280 (12%)
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA 224
+ EA++ YT II Y K+ ++ A M GF+ D VT + +V K G L A
Sbjct: 233 NLEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEA 292
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAG-----------MLDRG-------------- 259
+E E+K +G + +Y +++ + +AG ++ RG
Sbjct: 293 QELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDG 352
Query: 260 ----------EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPD 309
E + R + + S Y AL+ GY G+ E + + + ++ I P+
Sbjct: 353 LFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPN 412
Query: 310 ARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLI 369
+ +IN Y G +A + M + P+ A+++ K + A +
Sbjct: 413 VITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYN 472
Query: 370 DLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLR 409
+++ G V L KR ++E E +L++ R
Sbjct: 473 EMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSR 512
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 90/206 (43%), Gaps = 1/206 (0%)
Query: 172 DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEI 231
+YT ++ G+ K + A N + M + D VT V++ + G + A+ + +
Sbjct: 520 NYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYE-AKSVYSGM 578
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
+G ++ +Y M+ AY + G LD L EM + ++ S L+ G S G
Sbjct: 579 IEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEI 638
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALI 351
E A V + GI P+ + +L+NA +G++ + + GL+ + + +
Sbjct: 639 EKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNL 698
Query: 352 LSACEKENQLNRALEFLIDLERDGFM 377
+ + +A L + RDGF+
Sbjct: 699 IVVFCRLRMTKKATSVLKYMIRDGFV 724
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 105/245 (42%), Gaps = 4/245 (1%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
++ G + +I+ A N L M G + V V++ SK+G + E++ +G
Sbjct: 628 LVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMG 687
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
+++ +Y ++++ + R M + +L+ M + Y AL+RGY + + + A
Sbjct: 688 LKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKAL 747
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
+ + G++P+ LL+ AG + F M++ GL P ++S
Sbjct: 748 ATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGY 807
Query: 356 EKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRETYSKI 415
K ++ ++ GF+ L + F ++G +++ +L E +R +
Sbjct: 808 GKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVR----GV 863
Query: 416 PGSRS 420
P S S
Sbjct: 864 PPSSS 868
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 107/264 (40%), Gaps = 21/264 (7%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAM-KRRG--------------------F 201
+E ++I Y +I+G+ K+ + A++ L + + RG
Sbjct: 175 KEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNL 234
Query: 202 ICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEV 261
D +T T ++ Y K L+ A +EE+ + G D +Y S+V + G L +
Sbjct: 235 EADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQE 294
Query: 262 LLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQ 321
LLREM V Y L+ G++ A + G+T D MC L++
Sbjct: 295 LLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLF 354
Query: 322 MAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKE 381
+ + ++A F+ + K L P+ ++ K + R L ++E
Sbjct: 355 KSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVI 414
Query: 382 ASCTLAAWFKRLGVVEEVEHVLRE 405
++ + + G+++E +V+++
Sbjct: 415 TYSSIINGYTKKGILDEAINVMKK 438
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
T V+V + K GNL +A + + + +D +Y +++ + + G++++ L M
Sbjct: 47 THNVLVHAWCKMGNLILALDLLRNVDV---EVDTVTYNTVIWGFCQHGLVNQAFGFLSIM 103
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
++ + L++G+ G ++ +R+ + + G D LI+ Y AG+
Sbjct: 104 VKKDTCFDTITCNILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEM 163
Query: 327 QKAYTAFQNMRKAGL 341
A + MRK GL
Sbjct: 164 SLALDLVERMRKEGL 178
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 68/167 (40%), Gaps = 22/167 (13%)
Query: 200 GFIC-DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDR 258
G C D + ++ Y KAG + +A + E ++ G D SY +++ + + G D+
Sbjct: 141 GGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDK 200
Query: 259 GEVLLREMD-----AQEVYVGSE----------------VYKALLRGYSMNGNSEGAQRV 297
+ LL E+ V+ + Y ++ Y E A+ +
Sbjct: 201 AKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARAL 260
Query: 298 FEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
+E + G PD + ++N G+ +A + M+K G++P+
Sbjct: 261 YEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPN 307
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 111/251 (44%), Gaps = 4/251 (1%)
Query: 160 ALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
AL +E F + R YT +IHG K A MK +G + D ++ +
Sbjct: 570 ALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGF 629
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
K+G + A + EE+K G +YGS++ + LD +L E ++ + +
Sbjct: 630 CKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNV 689
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
+Y +L+ G+ G + A + E + G+TP+ L++A A + +A FQ+
Sbjct: 690 VIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQS 749
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGV 395
M+ P+ ++++ K + N+A F ++++ GF T+ + + G
Sbjct: 750 MKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGN 809
Query: 396 VEEVEHVLREY 406
+ E + + ++
Sbjct: 810 IVEADTLFEKF 820
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 6/214 (2%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
L+ Q+ EL + N+ +T +I + ++ ++ A + L MK D V V
Sbjct: 222 LFQQMQELG-----YAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVC 276
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ + KAG + MA + F E+K G LD +Y SM+ +A L+ L MD +
Sbjct: 277 IDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQ 336
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
+ Y ++ GY M G E A + E + G P +++ GQ +A
Sbjct: 337 VPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALK 396
Query: 332 AFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
F+ M+K + P+ +++ K +L AL
Sbjct: 397 KFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETAL 429
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 101/246 (41%), Gaps = 5/246 (2%)
Query: 157 AELALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMV 212
A L+LL+E S E ++ Y I +GK ++ A MK G + D VT T M+
Sbjct: 253 AALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMI 312
Query: 213 VMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY 272
+ KA L A E FE + + +Y +M+M Y AG + LL +
Sbjct: 313 GVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCI 372
Query: 273 VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTA 332
Y +L G + A + FE ++ I P+ ++I+ AG+ + A
Sbjct: 373 PSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVV 431
Query: 333 FQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKR 392
M+ AGL P+ V +++ K +L+ A L+ C+L R
Sbjct: 432 RDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGR 491
Query: 393 LGVVEE 398
G V+E
Sbjct: 492 HGRVDE 497
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 103/242 (42%), Gaps = 10/242 (4%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I K +++ A AMK G + +T+ +MV KA L A F
Sbjct: 408 NLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIF 467
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM-DAQEVYVGSEVYKALLRGYSM 287
E + D +Y S++ R G +D L +M DA ++ + VY +L+R +
Sbjct: 468 EGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQI-PNAVVYTSLIRNFFK 526
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQ----MAGQSQKAYTAFQNMRKAGLEP 343
G E +++ + G +PD LL+N Y AG+ +K FQ ++ G P
Sbjct: 527 CGRKEDGHKIYNEMLRLGCSPD----LLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIP 582
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+ +++ K + A E ++ G ++ A T+ F + G V + +L
Sbjct: 583 DARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLL 642
Query: 404 RE 405
E
Sbjct: 643 EE 644
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 96/233 (41%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G G+ ++ A M I + V T ++ + K G + + + E+
Sbjct: 482 YCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEML 541
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
LG D + + +AG +++G L +E+ + Y L+ G G +
Sbjct: 542 RLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAH 601
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +F ++ G D R +I+ + +G+ KAY + M+ G EP+ ++
Sbjct: 602 EAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVI 661
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
K ++L+ A + + G + +L F ++G ++E ++ E
Sbjct: 662 DGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEE 714
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 85/208 (40%), Gaps = 4/208 (1%)
Query: 161 LLEES----FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS 216
L EE+ E N+ Y+ +I G+GK +I A + + ++G + T ++
Sbjct: 676 LFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALV 735
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
KA + A F+ +K L + +Y ++ + ++ V +EM Q
Sbjct: 736 KAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVF 795
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
Y ++ G + GN A +FE + G D+ + +I A ++ AY F+
Sbjct: 796 TYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEA 855
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRA 364
R G K ++L + K + +A
Sbjct: 856 RLKGCSIYTKTCVVLLDSLHKAECIEQA 883
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 119/283 (42%), Gaps = 13/283 (4%)
Query: 107 VKQIICVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPL-YLQVAELALLEES 165
V QI+ P ++ + LA + P + VL++LK + + + Y + AE +
Sbjct: 71 VCQILETGPWGSSVENRLAELD--LNPNPELVIGVLRRLKDVNNAVNYFRWAE----RLT 124
Query: 166 FEANIRD-YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA 224
A+ R+ Y ++ + + E L M GF T +V+ + K+ L+ A
Sbjct: 125 DRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREA 184
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
+ ++ L +Y +++ A + D L ++M V ++ L+R
Sbjct: 185 FTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRV 244
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
++ G + A + + ++ + PD + + I+ + AG+ A+ F M+ GL
Sbjct: 245 FAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLD 304
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLA 387
D ++ K ++LN A+E ++++ K+ C A
Sbjct: 305 DVTYTSMIGVLCKADRLNEAVELFEHMDQN-----KQVPCAYA 342
>gi|115466932|ref|NP_001057065.1| Os06g0199100 [Oryza sativa Japonica Group]
gi|51091829|dbj|BAD36643.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113595105|dbj|BAF18979.1| Os06g0199100 [Oryza sativa Japonica Group]
Length = 1283
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 108/221 (48%), Gaps = 3/221 (1%)
Query: 155 QVAEL---ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
Q AEL L+E+ F+ + Y +++ + K+ ++ E + + GF D +T M
Sbjct: 185 QEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTM 244
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ MY K G L +A ++E++ +G D +Y +V + + + +L EM +
Sbjct: 245 IHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGL 304
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
+ AL+ Y+ +G + A+R F+ + +G+ PD ++++ + + +++K
Sbjct: 305 KPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMV 364
Query: 332 AFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLE 372
++ M K G +P D ++L+A K N+ + + D+E
Sbjct: 365 LYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDME 405
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 107/251 (42%), Gaps = 4/251 (1%)
Query: 159 LALLEESFEANIR----DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
+A+ EE + R Y ++ +G+ + Q AE + +GF D VT ++
Sbjct: 153 VAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYA 212
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
++K G+++ E EE+ G D +Y +M+ Y + G LD L EM A
Sbjct: 213 FAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPD 272
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+ Y L+ A +V E + AG+ P + LI AY +G+ A F
Sbjct: 273 AVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFD 332
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
M ++G++P ++L + ++ + + + +DG+ L A +
Sbjct: 333 RMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGN 392
Query: 395 VVEEVEHVLRE 405
+E+E V+++
Sbjct: 393 EHDEIEGVIQD 403
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 98/242 (40%), Gaps = 35/242 (14%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I + ++ E + M+ GF D V L +++MY+ GN E +
Sbjct: 726 NMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVY 785
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL------ 282
I G D+ +Y ++++ Y R + G LL EM + + E YK LL
Sbjct: 786 HSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKA 845
Query: 283 ---------------RGYSMN--------------GNSEGAQRVFEAIQFAGITPDARMC 313
+GY +N N A+ + A++ GI P
Sbjct: 846 KLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATM 905
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
+L+ +Y +G +A +++ + LE S + +L A + + + L++++R
Sbjct: 906 HILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDYSLGITKLLEMKR 965
Query: 374 DG 375
DG
Sbjct: 966 DG 967
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 89/217 (41%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
++LE E + Y +I Y + + + L M +RG + +++ KA
Sbjct: 787 SILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAK 846
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ A+ FEE++ G L++ Y M+ Y A + E LL M +
Sbjct: 847 LWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMH 906
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ Y +G+ + A++V +++ + + + +++AY T M++
Sbjct: 907 ILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDYSLGITKLLEMKRD 966
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
G+EP + + A Q + A+ L L+ GF
Sbjct: 967 GVEPDHQVWTSFIRAASLCEQTDDAILLLKSLQDCGF 1003
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 100/248 (40%), Gaps = 5/248 (2%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK--MAEE 226
++ + ++ Y + + +A L AM+ + D V+ ++ +K+G L +A E
Sbjct: 60 TVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALE 119
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
E++ G D +Y +++ A + LD + EM A E Y A++ +
Sbjct: 120 LLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHG 179
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G ++ A+ +F+ + G PDA L+ A+ G ++ + + KAG
Sbjct: 180 RCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGI 239
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREY 406
++ K +L+ AL ++ G L ++ + E VL E
Sbjct: 240 TYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEM 299
Query: 407 ---GLRET 411
GL+ T
Sbjct: 300 ADAGLKPT 307
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 88/212 (41%), Gaps = 3/212 (1%)
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
T+ +M+ ++KAG++ + + +K G + Y M+ E+++ EM
Sbjct: 694 TVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEM 753
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
+ V LL Y+ GN + V+ +I AG+ PD LI Y +
Sbjct: 754 EGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRP 813
Query: 327 QKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
++ +T M K GL P + ++L+A K +A ++ G+ + + +
Sbjct: 814 EEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMM 873
Query: 387 AAWFKRLGVVEEVEHVL---REYGLRETYSKI 415
++ + EH+L +E G+ T + +
Sbjct: 874 MKIYRNARNHSKAEHLLSAMKEDGIEPTIATM 905
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 76/198 (38%), Gaps = 33/198 (16%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT ++ GK +I A L M G VT + ++ Y+K+G AE TF+ +
Sbjct: 276 YTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMV 335
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS- 291
G D+ +Y M+ + R+ + VL R M +Y+ LL + GN
Sbjct: 336 ESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALA-KGNEH 394
Query: 292 ---EGAQRVFEAIQ----------------------------FAGITPDARMCALLINAY 320
EG + EA+ G PD + +++AY
Sbjct: 395 DEIEGVIQDMEAVFEMNPLVISSILIKAECISQGASLLKRACLQGYEPDGKSLLSILDAY 454
Query: 321 QMAGQSQKAYTAFQNMRK 338
+ G+ +K + + +R+
Sbjct: 455 EKMGKHEKGLSLLEWIRQ 472
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 93/218 (42%), Gaps = 12/218 (5%)
Query: 208 LTVMVVMYSKAGNLKMAEETFEEIKLLGEP--LDKRSYGSMVMAYVRAGMLDRGEVLLRE 265
L+ V M G LK+ ++ +K L + +D+R + +++ AY +G+ + +
Sbjct: 588 LSCRVAMIEAYGKLKLWQQAENFVKGLKQESGVDRRIWNALIHAYAESGLYEHARAIFDI 647
Query: 266 MDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQ 325
M + E ++R ++G + V + +Q I L++ A+ AG
Sbjct: 648 MIKKGPLPTVESVNGMMRALIVDGRLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAGD 707
Query: 326 SQKAYTAFQNMRKAGLEPSDKCVALILS-ACEKENQLNRALEFLI-DLERDGFMVGKEAS 383
+ + M+ AG P+ +++S C N+ R +E ++ ++E GF
Sbjct: 708 VFEVMKIYNGMKAAGYLPNMHLYRIMISLLC--HNKRFRDVELMVAEMEGAGFKPDLVVL 765
Query: 384 CTLAAWFKRLGVVE---EVEHVLREYGL---RETYSKI 415
TL + G + EV H + E GL +TY+ +
Sbjct: 766 NTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTL 803
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 36/205 (17%), Positives = 79/205 (38%), Gaps = 36/205 (17%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
+I YGK Q AEN + +K+ + D+ ++ Y+++G + A F+ + G
Sbjct: 594 MIEAYGKLKLWQQAENFVKGLKQESGV-DRRIWNALIHAYAESGLYEHARAIFDIMIKKG 652
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
S M+ A + G LD V+++E+ ++ + +L ++ G+
Sbjct: 653 PLPTVESVNGMMRALIVDGRLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAGDVFEVM 712
Query: 296 RVFEAIQFAGITPDARMCALLIN-----------------------------------AY 320
+++ ++ AG P+ + ++I+ Y
Sbjct: 713 KIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMY 772
Query: 321 QMAGQSQKAYTAFQNMRKAGLEPSD 345
G + + ++ +AGLEP +
Sbjct: 773 TGTGNFDRTIEVYHSILEAGLEPDE 797
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 111/257 (43%), Gaps = 3/257 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
F + R Y+ +IHG K AMK +G + D ++ + K+G +
Sbjct: 573 HGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNK 632
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A + EE+K+ G P +YGS++ + LD +L E + + + VY +L+
Sbjct: 633 AYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLID 692
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G+ G + A + E + G+TP+ L++A A + +A FQ+M+ P
Sbjct: 693 GFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPP 752
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+ +++++ + + N+A F ++++ G T+ + + G + E +
Sbjct: 753 NQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLF 812
Query: 404 REYGLRETYSKIPGSRS 420
+ + IP S S
Sbjct: 813 SRF---KANGGIPDSAS 826
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 111/257 (43%), Gaps = 2/257 (0%)
Query: 122 DLLAAWVRF-MKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGY 180
D++ +F +P + + ++ L + P + + + E +E N+ +T +I +
Sbjct: 181 DIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVF 240
Query: 181 GKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDK 240
++ ++ A + L MK D V V + + KAG + M+ + F E+K G D
Sbjct: 241 AREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDD 300
Query: 241 RSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEA 300
+Y SM+ +A LD L +++ + Y ++ GY G + A + E
Sbjct: 301 VTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLER 360
Query: 301 IQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQ 360
+ G P ++ + ++A F+ M++ + P+ +++ +E +
Sbjct: 361 QKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGK 419
Query: 361 LNRALEFLIDLERDGFM 377
LN ALE D+ER G
Sbjct: 420 LNAALEIRDDMERAGLF 436
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/237 (19%), Positives = 100/237 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N ++ +I G GK ++ +A + M G + + T ++ + K G + + +
Sbjct: 473 NAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIY 532
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+ G D + + +AG ++G L RE++A + Y L+ G
Sbjct: 533 KEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKA 592
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + +F A++ G D +I+ + +G+ KAY + M+ G P+
Sbjct: 593 GLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTY 652
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ K ++L+ A + + +G + +L F ++G ++E ++ E
Sbjct: 653 GSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEE 709
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/237 (19%), Positives = 99/237 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I ++ ++ A M+R G + +T+ +M+ KA L+ A F
Sbjct: 403 NVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIF 462
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E + + ++ S++ + G +D L +M G+ VY +L+R +
Sbjct: 463 EGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKC 522
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G E ++++ + G +PD + ++ AG+++K F+ + G P +
Sbjct: 523 GRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSY 582
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++++ K N E ++ G ++ A + F + G V + +L E
Sbjct: 583 SILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEE 639
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 82/196 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y+ +I G+GK +I A + + ++G + T ++ KA + A F
Sbjct: 683 NVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICF 742
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ +K L P ++ +Y ++ R ++ V +EM + + Y ++ G +
Sbjct: 743 QSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKA 802
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
GN A +F + G PD+ +I A ++ AY F+ R G K
Sbjct: 803 GNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTC 862
Query: 349 ALILSACEKENQLNRA 364
++L A K L +A
Sbjct: 863 VVLLDALHKAECLEQA 878
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 32/163 (19%), Positives = 67/163 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L+++ N+ + ++ K +I A +MK +Q+T ++++ +
Sbjct: 710 LMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRK 769
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A ++E++ LG + +Y +M+ +AG + L A S Y A
Sbjct: 770 FNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNA 829
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
++ G S + A +FE + G + C +L++A A
Sbjct: 830 MIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKA 872
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 67/171 (39%), Gaps = 1/171 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I GYG + A L K +G I + ++ K ++ A FEE+K
Sbjct: 338 YNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMK 397
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
P + +Y ++ R G L+ + +M+ ++ ++ E
Sbjct: 398 RDAVP-NVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLE 456
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
A +FE + TP+A + LI+ G+ AY+ ++ M G P
Sbjct: 457 EACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVP 507
>gi|147859909|emb|CAN83144.1| hypothetical protein VITISV_040783 [Vitis vinifera]
Length = 724
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 92/190 (48%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
II G+ K + A + L ++ G TL ++ AG + AE FEE+K G
Sbjct: 333 IIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGG 392
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
R+Y +++ YV+ G L E ++ EM+ Y L+ Y+ G E A+
Sbjct: 393 LMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESAR 452
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
V + ++ +G+ P++ + + ++ +Y+ G+ QK++ + MR +G+ P +++
Sbjct: 453 IVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTF 512
Query: 356 EKENQLNRAL 365
K N L+ AL
Sbjct: 513 GKCNCLDHAL 522
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 87/200 (43%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
+I G + + AE +K G + ++ Y K G+LK AE E++ G
Sbjct: 368 VITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSG 427
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
D+ +Y ++ AY AG + ++L+EM+A V S V+ +L Y G + +
Sbjct: 428 FSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSF 487
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
+V ++ +G++PD ++I+ + A F MR G++P ++
Sbjct: 488 QVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCH 547
Query: 356 EKENQLNRALEFLIDLERDG 375
K N+A E ++ G
Sbjct: 548 CKSGHHNKAEELFEAMQESG 567
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 103/232 (44%), Gaps = 4/232 (1%)
Query: 160 ALLEESFEANI----RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
A+ EE E + R Y ++ GY K +++AE+ + M+R GF D+ T ++++ Y
Sbjct: 383 AIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAY 442
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
+ AG + A +E++ G + + ++ +Y G + +LREM V
Sbjct: 443 ANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDR 502
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
Y ++ + + A F+ ++ G+ PDA LI+ + +G KA F+
Sbjct: 503 HFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEA 562
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLA 387
M+++G P +++++ ++ + L ++ G + TL
Sbjct: 563 MQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLG 614
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 102/235 (43%), Gaps = 7/235 (2%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +IH G+ ++ A L +R+ +T ++ ++ +L+ A ++
Sbjct: 228 YSILIHALGRSEKLYEA---FLLSQRQTLT--PLTYNALIGACARNDDLEKALNLMSRMR 282
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRG--EVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
G P D +Y ++ + R D + + E+++ ++ + ++ ++ G++ +G+
Sbjct: 283 RDGYPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKSGD 342
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
A +Q G++P +I A AG++++A F+ +++ GL P +
Sbjct: 343 VNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNA 402
Query: 351 ILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+L K L A + ++ER GF + L + G E VL+E
Sbjct: 403 LLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKE 457
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 76/171 (44%), Gaps = 7/171 (4%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I +GK + +A T M+ G D VT ++ + K+G+ AEE FE ++
Sbjct: 505 YNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQ 564
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G +Y M+ ++ + + LL +M +Q + Y L G SE
Sbjct: 565 ESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTL-------GLSE 617
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
A F ++ G+ P + LINA+ + +A++ Q M++ L+P
Sbjct: 618 QAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKP 668
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 111/251 (44%), Gaps = 4/251 (1%)
Query: 160 ALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
AL +E F + R YT +IHG K A MK +G + D ++ +
Sbjct: 570 ALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGF 629
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
K+G + A + EE+K G +YGS++ + LD +L E ++ + +
Sbjct: 630 CKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNV 689
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
+Y +L+ G+ G + A + E + G+TP+ L++A A + +A FQ+
Sbjct: 690 VIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQS 749
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGV 395
M+ P+ ++++ K + N+A F ++++ GF T+ + + G
Sbjct: 750 MKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGN 809
Query: 396 VEEVEHVLREY 406
+ E + + ++
Sbjct: 810 IVEADTLFEKF 820
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 6/214 (2%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
L+ Q+ EL + N+ +T +I + ++ ++ A + L MK D V V
Sbjct: 222 LFQQMQELG-----YAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVC 276
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ + KAG + MA + F E+K G LD +Y SM+ +A L+ L MD +
Sbjct: 277 IDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQ 336
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
+ Y ++ GY M G E A + E + G P +++ GQ +A
Sbjct: 337 VPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALK 396
Query: 332 AFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
F+ M+K + P+ +++ K +L AL
Sbjct: 397 KFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETAL 429
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 101/246 (41%), Gaps = 5/246 (2%)
Query: 157 AELALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMV 212
A L+LL+E S E ++ Y I +GK ++ A MK G + D VT T M+
Sbjct: 253 AALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMI 312
Query: 213 VMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY 272
+ KA L A E FE + + +Y +M+M Y AG + LL +
Sbjct: 313 GVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCI 372
Query: 273 VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTA 332
Y +L G + A + FE ++ I P+ ++I+ AG+ + A
Sbjct: 373 PSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVV 431
Query: 333 FQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKR 392
M+ AGL P+ V +++ K +L+ A L+ C+L R
Sbjct: 432 RDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGR 491
Query: 393 LGVVEE 398
G V+E
Sbjct: 492 HGRVDE 497
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 103/242 (42%), Gaps = 10/242 (4%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I K +++ A AMK G + +T+ +MV KA L A F
Sbjct: 408 NLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIF 467
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM-DAQEVYVGSEVYKALLRGYSM 287
E + D +Y S++ R G +D L +M DA ++ + VY +L+R +
Sbjct: 468 EGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQI-PNAVVYTSLIRNFFK 526
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQ----MAGQSQKAYTAFQNMRKAGLEP 343
G E +++ + G +PD LL+N Y AG+ +K FQ ++ G P
Sbjct: 527 CGRKEDGHKIYNEMLRLGCSPD----LLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIP 582
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+ +++ K + A E ++ G ++ A T+ F + G V + +L
Sbjct: 583 DARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLL 642
Query: 404 RE 405
E
Sbjct: 643 EE 644
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 96/233 (41%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G G+ ++ A M I + V T ++ + K G + + + E+
Sbjct: 482 YCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEML 541
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
LG D + + +AG +++G L +E+ + Y L+ G G +
Sbjct: 542 RLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAH 601
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +F ++ G D R +I+ + +G+ KAY + M+ G EP+ ++
Sbjct: 602 EAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVI 661
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
K ++L+ A + + G + +L F ++G ++E ++ E
Sbjct: 662 DGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEE 714
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 85/208 (40%), Gaps = 4/208 (1%)
Query: 161 LLEES----FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS 216
L EE+ E N+ Y+ +I G+GK +I A + + ++G + T ++
Sbjct: 676 LFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALV 735
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
KA + A F+ +K L + +Y ++ + ++ V +EM Q
Sbjct: 736 KAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVF 795
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
Y ++ G + GN A +FE + G D+ + +I A ++ AY F+
Sbjct: 796 TYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEA 855
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRA 364
R G K ++L + K + +A
Sbjct: 856 RLKGCSIYTKTCVVLLDSLHKAECIEQA 883
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 119/283 (42%), Gaps = 13/283 (4%)
Query: 107 VKQIICVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPL-YLQVAELALLEES 165
V QI+ P ++ + LA + P + VL++LK + + + Y + AE +
Sbjct: 71 VCQILETGPWGSSVENRLAELD--LNPNPELVIGVLRRLKDVNNAVNYFRWAE----RLT 124
Query: 166 FEANIRD-YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA 224
A+ R+ Y ++ + + E L M GF T +V+ + K+ L+ A
Sbjct: 125 DRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREA 184
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
+ ++ L +Y +++ A + D L ++M V ++ L+R
Sbjct: 185 FTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRV 244
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
++ G + A + + ++ + PD + + I+ + AG+ A+ F M+ GL
Sbjct: 245 FAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLD 304
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLA 387
D ++ K ++LN A+E ++++ K+ C A
Sbjct: 305 DVTYTSMIGVLCKADRLNEAVELFEHMDQN-----KQVPCAYA 342
>gi|225457536|ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial [Vitis vinifera]
gi|297745544|emb|CBI40709.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 92/190 (48%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
II G+ K + A + L ++ G TL ++ AG + AE FEE+K G
Sbjct: 262 IIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGG 321
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
R+Y +++ YV+ G L E ++ EM+ Y L+ Y+ G E A+
Sbjct: 322 LMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESAR 381
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
V + ++ +G+ P++ + + ++ +Y+ G+ QK++ + MR +G+ P +++
Sbjct: 382 IVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTF 441
Query: 356 EKENQLNRAL 365
K N L+ AL
Sbjct: 442 GKCNCLDHAL 451
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 82/172 (47%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I +GK + +A T M+ G D VT ++ + K+G+ AEE FE ++
Sbjct: 434 YNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQ 493
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G +Y M+ ++ + + LL +M +Q + Y L+ Y +G +
Sbjct: 494 ESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGRFK 553
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A E ++ G+ P + M LINAY G S++A AF+ MR GL+PS
Sbjct: 554 DAIECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAINAFRVMRADGLKPS 605
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 115/259 (44%), Gaps = 7/259 (2%)
Query: 160 ALLEESFEANI----RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
A+ EE E + R Y ++ GY K +++AE+ + M+R GF D+ T ++++ Y
Sbjct: 312 AIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAY 371
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
+ AG + A +E++ G + + ++ +Y G + +LREM V
Sbjct: 372 ANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDR 431
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
Y ++ + + A F+ ++ G+ PDA LI+ + +G KA F+
Sbjct: 432 HFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEA 491
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGV 395
M+++G P +++++ ++ + L ++ G + TL + + G
Sbjct: 492 MQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGR 551
Query: 396 VE---EVEHVLREYGLRET 411
+ E V++ GL+ +
Sbjct: 552 FKDAIECLEVMKSVGLKPS 570
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 87/200 (43%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
+I G + + AE +K G + ++ Y K G+LK AE E++ G
Sbjct: 297 VITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSG 356
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
D+ +Y ++ AY AG + ++L+EM+A V S V+ +L Y G + +
Sbjct: 357 FSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSF 416
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
+V ++ +G++PD ++I+ + A F MR G++P ++
Sbjct: 417 QVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCH 476
Query: 356 EKENQLNRALEFLIDLERDG 375
K N+A E ++ G
Sbjct: 477 CKSGHHNKAEELFEAMQESG 496
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 102/235 (43%), Gaps = 7/235 (2%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +IH G+ ++ A L +R+ +T ++ ++ +L+ A ++
Sbjct: 157 YSILIHALGRSEKLYEA---FLLSQRQTLT--PLTYNALIGACARNDDLEKALNLMSRMR 211
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRG--EVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
G P D +Y ++ + R D + + E+++ ++ + ++ ++ G++ +G+
Sbjct: 212 RDGFPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKSGD 271
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
A +Q G++P +I A AG++++A F+ +++ GL P +
Sbjct: 272 VNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNA 331
Query: 351 ILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+L K L A + ++ER GF + L + G E VL+E
Sbjct: 332 LLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKE 386
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/204 (18%), Positives = 86/204 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+++I+ Y + + Q + L M+ G D+ VM+ + K L A TF+ ++
Sbjct: 399 FSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMR 458
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ G D ++ +++ + ++G ++ E L M + Y ++ + E
Sbjct: 459 MEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWE 518
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
+ + +Q G+ + L++ Y +G+ + A + M+ GL+PS ++
Sbjct: 519 DVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALI 578
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
+A + +A+ + DG
Sbjct: 579 NAYAQRGLSEQAINAFRVMRADGL 602
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 74/171 (43%), Gaps = 35/171 (20%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+ +G++ + ++ + L M+ +G + + VT T +V +Y ++G K A E E +K
Sbjct: 504 YNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGRFKDAIECLEVMK 563
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+G + S +Y AL+ Y+ G SE
Sbjct: 564 SVG-----------------------------------LKPSSTMYNALINAYAQRGLSE 588
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
A F ++ G+ P + LINA+ + +A++ Q M++ L+P
Sbjct: 589 QAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKP 639
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 109/237 (45%), Gaps = 1/237 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ YT +I G+ K+ + A + + R + D T +V++ S+ G + A F
Sbjct: 555 NVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIF 614
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++ G + +Y S++ + G +D+ LL EM + + Y L+ G
Sbjct: 615 SELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKA 674
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G E A+ +F+ I+ G+TP+ A +++ Y + A+ + M G+ P
Sbjct: 675 GEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIY 734
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+IL+ C KE + +AL+ ++ GF + TL + + G ++E H+L E
Sbjct: 735 NVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEE 790
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 91/214 (42%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E+ ++ Y +I G+ K +++ A L+ M R + T + YSKAG ++
Sbjct: 479 EQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEME 538
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
+A+ F E+ G + Y +++ + + G + + R + ++ V + Y L+
Sbjct: 539 IADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLI 598
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G S NG A +F +Q G+ P+A LI+ G KA + M G+
Sbjct: 599 HGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGIN 658
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
P +++ K ++ RA D+E G
Sbjct: 659 PDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGL 692
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 111/288 (38%), Gaps = 44/288 (15%)
Query: 161 LLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS 216
LLEE +I Y +I G K +I+ A+N ++ RG + VT MV Y
Sbjct: 648 LLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYC 707
Query: 217 KAGNLKMAEETFEEIKLLGEPLD----------------------------------KRS 242
K+ N A + EE+ L G P D S
Sbjct: 708 KSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVS 767
Query: 243 YGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQ 302
+ +++ Y ++G L LL EM ++ Y +L+ G A+R++ +Q
Sbjct: 768 FNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQ 827
Query: 303 FAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLN 362
+ P A+ L++ Y G + F+ M G+EP +++ A +E +
Sbjct: 828 ERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVM 887
Query: 363 RALEFLIDL------ERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
A + ++ + GF +G +A F+ G ++E VLR
Sbjct: 888 EACKLKDEILVKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLR 935
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 93/203 (45%), Gaps = 3/203 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G+ ++ I+ A M G + + ++ KAG ++ A E +E+
Sbjct: 314 YNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMM 373
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D ++Y ++ + R + R LL EM +++ Y ++ G GN +
Sbjct: 374 EKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQ 433
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV-ALI 351
G + + G+ P+A + L+ A+ G+ +++ + MR+ G+ P C +LI
Sbjct: 434 GTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLI 493
Query: 352 LSACEKENQLNRALEFLID-LER 373
+ C K ++ A +L++ LER
Sbjct: 494 IGFC-KAKRMEEARTYLMEMLER 515
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 84/186 (45%), Gaps = 7/186 (3%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+LE+ F + + + +I GY K ++Q A + L M + FI + VT T ++ KAG
Sbjct: 757 MLEKGFASTV-SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGM 815
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A+ + E++ ++Y S++ Y G + L EM A+ + Y
Sbjct: 816 MGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYV 875
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARM------CALLINAYQMAGQSQKAYTAFQ 334
++ Y GN A ++ + I G+ + C+++ +Q+AG +A +
Sbjct: 876 MIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLR 935
Query: 335 NMRKAG 340
+M K G
Sbjct: 936 SMVKFG 941
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 88/200 (44%), Gaps = 1/200 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E+ E + + Y+ +I G+ + + A L MK+R +T +V++ + GN
Sbjct: 372 MMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGN 431
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ E+ + G + Y +++ A+ + G ++ ++L M Q + Y +
Sbjct: 432 LQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNS 491
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G+ E A+ + + P+A I+ Y AG+ + A F M G
Sbjct: 492 LIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCG 551
Query: 341 LEPSDKC-VALILSACEKEN 359
+ P+ ALI C++ N
Sbjct: 552 VLPNVGIYTALIEGHCKEGN 571
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 97/239 (40%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
EAN+ + +++G K +++ A + M +G D T ++++ + + N+ A
Sbjct: 342 IEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAF 401
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
E +E+K +Y ++ R G L +LREM + + VY L+ +
Sbjct: 402 ELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAH 461
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
+ G E ++ + E ++ GI PD LI + A + ++A T M + L P+
Sbjct: 462 AKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNA 521
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
+ K ++ A + ++ G + L + G V E V R
Sbjct: 522 HTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFR 580
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 77/182 (42%), Gaps = 6/182 (3%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E+ F N YT +I K + A+ L M+ R + T T ++ Y GN
Sbjct: 791 MIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGN 850
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLD-----RGEVLLREMDAQEVY-VG 274
+ FEE+ G DK +Y M+ AY R G + + E+L++ M + + +G
Sbjct: 851 MSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLG 910
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+ RG+ + GN + A V ++ G + L++ Q S+ + +
Sbjct: 911 LPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLK 970
Query: 335 NM 336
M
Sbjct: 971 QM 972
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/295 (17%), Positives = 131/295 (44%), Gaps = 5/295 (1%)
Query: 113 VSPETGNLSDLLAAWVRF--MKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANI 170
V P+ +++++A + +K + L + ++ +L++ + L+ +++++ ++
Sbjct: 220 VLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELK---RSMVDKGLVPDL 276
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
Y +I+G+ + + + A+ LL M G + +T ++ + + G+++ A +E
Sbjct: 277 YTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDE 336
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
+ G + + +++ +AG +++ +++EM + V S+ Y L+ G+ N
Sbjct: 337 MVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQN 396
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
A + + ++ + P +++IN G Q + M GL+P+
Sbjct: 397 MARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTT 456
Query: 351 ILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+++A KE ++ + L + G + +L F + +EE L E
Sbjct: 457 LMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLME 511
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 99/218 (45%), Gaps = 4/218 (1%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
+ NI Y I++G K I+ A + + G D VT T ++ Y K+G + A+
Sbjct: 910 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 969
Query: 226 ETFEEIKLLGEPLDKR--SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
E E +LG+ L ++ ++ + GML+ GE LL M A+ + + + L++
Sbjct: 970 EILTE--MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVK 1027
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
Y + N + A +++ + G+ PD + L+ + A ++A+ FQ M+ G
Sbjct: 1028 QYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSV 1087
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKE 381
S ++++ K + A E + RDG KE
Sbjct: 1088 SVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKE 1125
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 114/252 (45%), Gaps = 5/252 (1%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ N+ YT +I G K+ + +A L M + G + T +V K+GN
Sbjct: 870 MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN 929
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ A + E + G D +Y +++ AY ++G +D+ + +L EM + + +
Sbjct: 930 IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNV 989
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G+ ++G E +++ + GI P+A L+ Y + + A +++M G
Sbjct: 990 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRG 1049
Query: 341 LEPSDKCVA-LILSACEKENQLNRALEFLIDLERDGFMVGKEA-SCTLAAWFKRLGVVE- 397
+EP K L+ C N + A +++ GF V S + +FKR VE
Sbjct: 1050 VEPDGKTYENLVKGHCNARN-MKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEA 1108
Query: 398 -EVEHVLREYGL 408
E+ +R GL
Sbjct: 1109 REIFDQMRRDGL 1120
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 110/249 (44%), Gaps = 1/249 (0%)
Query: 159 LALLE-ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSK 217
L L+E + + ++ Y+ +I+GY + ++ + MK++G + T ++ + +
Sbjct: 692 LLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCR 751
Query: 218 AGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
L AEE F E+ G D Y ++V + + G + EM ++++
Sbjct: 752 ICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLT 811
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y A++ G+ G+ A ++F + G+ PD L+N Y AG + A+ +M
Sbjct: 812 YTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMI 871
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
+AG P+ ++ KE L+ A E L ++ + G ++ + G +E
Sbjct: 872 QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 931
Query: 398 EVEHVLREY 406
E ++ E+
Sbjct: 932 EAVKLVGEF 940
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 78/175 (44%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +IH + +I A + LL M+ +G+ D ++ + ++ Y + G L +
Sbjct: 668 NVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLI 727
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++K G + +YGS++ R L E EM Q + + VY L+ G+
Sbjct: 728 EKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKR 787
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G+ A + F + ITPD +I+ + G +A F M GLEP
Sbjct: 788 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEP 842
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/152 (19%), Positives = 66/152 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + + I + +++G+ +++ E L M +G + T +V Y N
Sbjct: 975 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNN 1034
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
LK A ++++ G D ++Y ++V + A + L +EM + V Y
Sbjct: 1035 LKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSV 1094
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARM 312
L++G+ A+ +F+ ++ G+ D +
Sbjct: 1095 LIKGFFKRKKFVEAREIFDQMRRDGLAADKEI 1126
>gi|226499896|ref|NP_001150085.1| EMB2745 [Zea mays]
gi|195636584|gb|ACG37760.1| EMB2745 [Zea mays]
gi|414879767|tpg|DAA56898.1| TPA: EMB2745 [Zea mays]
Length = 410
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 98/217 (45%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
A+ E +I + +I GYGK ++ NA + MK G VT ++ + +
Sbjct: 168 AMRREGIRPSIVTFNLLIDGYGKAGKMANALHFFNQMKAAGLPPSVVTYNELICGFCRVR 227
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A F ++K G K +Y ++ A+ + +DR ++L EM+ + V + Y
Sbjct: 228 DIARAVRAFLDMKERGLAPTKVTYTILIAAFAKENEMDRAFMMLSEMEKAGLEVDVQSYG 287
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
LL M G A+++F+++ G+ P++ + ++I Y G S KA MRK
Sbjct: 288 VLLHALCMEGKMMHARKLFQSMDLKGVKPNSVLYDMMIYGYGREGSSYKALRLIMEMRKN 347
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
GL P+ L + E + A + D+E G
Sbjct: 348 GLIPNVASYCLTIRLLCNEGKCQEAEALIDDMEHAGL 384
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 87/186 (46%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y ++I G+ + I A L MK RG +VT T+++ ++K + A
Sbjct: 212 SVVTYNELICGFCRVRDIARAVRAFLDMKERGLAPTKVTYTILIAAFAKENEMDRAFMML 271
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++ G +D +SYG ++ A G + L + MD + V S +Y ++ GY
Sbjct: 272 SEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDLKGVKPNSVLYDMMIYGYGRE 331
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G+S A R+ ++ G+ P+ L I G+ Q+A +M AGL+ S+
Sbjct: 332 GSSYKALRLIMEMRKNGLIPNVASYCLTIRLLCNEGKCQEAEALIDDMEHAGLQTSETIC 391
Query: 349 ALILSA 354
++L A
Sbjct: 392 RILLDA 397
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 92/219 (42%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKL 233
T ++H + + A M R G ++VT T ++ Y G+ +M F E++
Sbjct: 42 TALVHVCCQSGDVAEARRVFDVMPRLGVAPNEVTYTALINGYFVRGHREMGFALFAEMRR 101
Query: 234 LGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEG 293
G + +Y ++ + R G +L EM + V Y L+ G + +
Sbjct: 102 DGVEPNLYTYNCLIGEWCRTGEFKSARLLFDEMPVKGVVHNVVSYNILIAGLCRHSKLKD 161
Query: 294 AQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILS 353
A ++FEA++ GI P LLI+ Y AG+ A F M+ AGL PS ++
Sbjct: 162 AVQLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANALHFFNQMKAAGLPPSVVTYNELIC 221
Query: 354 ACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKR 392
+ + RA+ +D++ G K L A F +
Sbjct: 222 GFCRVRDIARAVRAFLDMKERGLAPTKVTYTILIAAFAK 260
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 104/237 (43%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I G + ++++A AM+R G VT +++ Y KAG + A F
Sbjct: 142 NVVSYNILIAGLCRHSKLKDAVQLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANALHFF 201
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++K G P +Y ++ + R + R +M + + Y L+ ++
Sbjct: 202 NQMKAAGLPPSVVTYNELICGFCRVRDIARAVRAFLDMKERGLAPTKVTYTILIAAFAKE 261
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
+ A + ++ AG+ D + +L++A M G+ A FQ+M G++P+
Sbjct: 262 NEMDRAFMMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDLKGVKPNSVLY 321
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+++ +E +AL ++++ ++G + + C G +E E ++ +
Sbjct: 322 DMMIYGYGREGSSYKALRLIMEMRKNGLIPNVASYCLTIRLLCNEGKCQEAEALIDD 378
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I+GY + + M+R G + T ++ + + G K A F+E+
Sbjct: 76 YTALINGYFVRGHREMGFALFAEMRRDGVEPNLYTYNCLIGEWCRTGEFKSARLLFDEMP 135
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ G + SY ++ R L L M + + + L+ GY G
Sbjct: 136 VKGVVHNVVSYNILIAGLCRHSKLKDAVQLFEAMRREGIRPSIVTFNLLIDGYGKAGKMA 195
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A F ++ AG+ P LI + +A AF +M++ GL P+ +++
Sbjct: 196 NALHFFNQMKAAGLPPSVVTYNELICGFCRVRDIARAVRAFLDMKERGLAPTKVTYTILI 255
Query: 353 SACEKENQLNRALEFLIDLERDGFMV 378
+A KEN+++RA L ++E+ G V
Sbjct: 256 AAFAKENEMDRAFMMLSEMEKAGLEV 281
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 73/173 (42%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D T +V + ++G++ A F+ + LG ++ +Y +++ Y G + G L
Sbjct: 37 DVAACTALVHVCCQSGDVAEARRVFDVMPRLGVAPNEVTYTALINGYFVRGHREMGFALF 96
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
EM V Y L+ + G + A+ +F+ + G+ + +LI
Sbjct: 97 AEMRRDGVEPNLYTYNCLIGEWCRTGEFKSARLLFDEMPVKGVVHNVVSYNILIAGLCRH 156
Query: 324 GQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+ + A F+ MR+ G+ PS L++ K ++ AL F ++ G
Sbjct: 157 SKLKDAVQLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANALHFFNQMKAAGL 209
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 247 VMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGI 306
V A VR+ + VL R + + + AL+ +G+ A+RVF+ + G+
Sbjct: 14 VAAEVRSAL----AVLARGTKSGDAALDVAACTALVHVCCQSGDVAEARRVFDVMPRLGV 69
Query: 307 TPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
P+ LIN Y + G + + F MR+ G+EP+
Sbjct: 70 APNEVTYTALINGYFVRGHREMGFALFAEMRRDGVEPN 107
>gi|302821471|ref|XP_002992398.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
gi|300139814|gb|EFJ06548.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
Length = 698
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 98/208 (47%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
A+ Y ++ GK + AE L MK G + ++ YS+ G L+ +
Sbjct: 280 ADRDSYISLMLSLGKHGRTAEAEALLEEMKWYGLRPNLKAYNTLLGGYSRKGQLQQIDTV 339
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
++ G ++K +Y ++ AY RAG++DR E L +EM ++ + +Y ++ Y
Sbjct: 340 KTLLRDTGMSINKITYCLLIDAYARAGLMDRLEALYQEMRDCDIRPNTYMYARMITIYRD 399
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G + ++ +Q AG+TPDA + ++IN + Q ++A AF M+ G+EP
Sbjct: 400 TGQWQKGVKLLREMQQAGVTPDAHVYNVIINTFGRTRQLEQARIAFFKMQDGGIEPDVVS 459
Query: 348 VALILSACEKENQLNRALEFLIDLERDG 375
++ AC K Q A + + DG
Sbjct: 460 WNSLIDACCKAGQPLEARKLYYKMVNDG 487
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 114/284 (40%), Gaps = 39/284 (13%)
Query: 160 ALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
ALLEE N++ Y ++ GY +K Q+Q + ++ G +++T +++ Y
Sbjct: 303 ALLEEMKWYGLRPNLKAYNTLLGGYSRKGQLQQIDTVKTLLRDTGMSINKITYCLLIDAY 362
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
++AG + E ++E++ + Y M+ Y G +G LLREM V +
Sbjct: 363 ARAGLMDRLEALYQEMRDCDIRPNTYMYARMITIYRDTGQWQKGVKLLREMQQAGVTPDA 422
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
VY ++ + E A+ F +Q GI PD LI+A AGQ +A +
Sbjct: 423 HVYNVIINTFGRTRQLEQARIAFFKMQDGGIEPDVVSWNSLIDACCKAGQPLEARKLYYK 482
Query: 336 MRKAGLEPSDKCVALILSACEKENQLN--------------------------------- 362
M G P+ + +++ + + N
Sbjct: 483 MVNDGCAPTAQTFNIVIHGLGEHKRWNDVNEMVEEMRSKGMFPNVVTYTTLVDVYAQARL 542
Query: 363 --RALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
A+E L ++ DG A LA + +LG+ E+ HVL+
Sbjct: 543 FQDAVECLQTMKEDGMGPSPTAYSALANAYAQLGMCEQTLHVLQ 586
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 107/233 (45%), Gaps = 1/233 (0%)
Query: 131 MKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAE 190
++P W +++ PL + ++ + + + +IHG G+ + +
Sbjct: 453 IEPDVVSWNSLIDACCKAGQPLEARKLYYKMVNDGCAPTAQTFNIVIHGLGEHKRWNDVN 512
Query: 191 NTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAY 250
+ M+ +G + VT T +V +Y++A + A E + +K G +Y ++ AY
Sbjct: 513 EMVEEMRSKGMFPNVVTYTTLVDVYAQARLFQDAVECLQTMKEDGMGPSPTAYSALANAY 572
Query: 251 VRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDA 310
+ GM ++ +L+ M+ + + + + L+ +SM G S+ A VFE I+ AG+T D
Sbjct: 573 AQLGMCEQTLHVLQTMEKENIEINLAMLNLLINAFSMAGRSQEAFAVFEYIKEAGLTADK 632
Query: 311 RMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACE-KENQLN 362
L+ A A + + F M KAG P K ++ SA KE +L+
Sbjct: 633 ITYTTLMKALIRAEKLDEVSGVFDEMIKAGCRPDGKAKDMLRSAFRFKERELS 685
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 156/371 (42%), Gaps = 62/371 (16%)
Query: 50 RSGPALEAIKAEDMGKTQVKDDTSMFTWIQIGPNITEE----QKQAISQFPRKMTKRCKA 105
R+G L I E++ K W + ++ E +K A+ QF RK+ +R
Sbjct: 54 RNGGKLREISLEEIEKRLRNHWNGGLPWKALLGSLERENAIGEKFAVEQF-RKVPERAWH 112
Query: 106 FVKQIICVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEES 165
++ Q +CVS + S+LL W+R E S
Sbjct: 113 WLLQELCVSGRSSFASELL-EWLR---------------------------------ENS 138
Query: 166 FEANIRDY----TKIIHGYGKKMQIQN----AENTLLAMKRRGFICDQVTLTVMVVMYSK 217
F R Y + +IHGYG++ ++ AE ++RRG+ +V Y++
Sbjct: 139 F---CRTYDVLDSVVIHGYGRERKLHKALEVAEKLGSNLQRRGY-------NALVGAYAQ 188
Query: 218 AGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLD--RGEVLLREMDAQEVYVGS 275
+ A ET ++K LG P D SY ++ A R G++D G L +EM A+ V V
Sbjct: 189 NRDYGKALETLSKMKTLGFPPDVVSYTHVIQA-CRHGVVDIYTGFRLFQEMQAEGVQVDG 247
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
+VY L+ E +Q +G+ D L+ + G++ +A +
Sbjct: 248 KVYNDLIFACGQAHKPNEGMFFLEKLQASGLVADRDSYISLMLSLGKHGRTAEAEALLEE 307
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD-GFMVGKEASCTLAAWFKRLG 394
M+ GL P+ K +L ++ QL + ++ + L RD G + K C L + R G
Sbjct: 308 MKWYGLRPNLKAYNTLLGGYSRKGQLQQ-IDTVKTLLRDTGMSINKITYCLLIDAYARAG 366
Query: 395 VVEEVEHVLRE 405
+++ +E + +E
Sbjct: 367 LMDRLEALYQE 377
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 92/204 (45%), Gaps = 6/204 (2%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
E + + + Y +I G+ + L ++ G + D+ + +++ K G
Sbjct: 241 EGVQVDGKVYNDLIFACGQAHKPNEGMFFLEKLQASGLVADRDSYISLMLSLGKHGRTAE 300
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGML---DRGEVLLREMDAQEVYVGSEVYKA 280
AE EE+K G + ++Y +++ Y R G L D + LLR+ + + Y
Sbjct: 301 AEALLEEMKWYGLRPNLKAYNTLLGGYSRKGQLQQIDTVKTLLRDTG---MSINKITYCL 357
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ Y+ G + + +++ ++ I P+ M A +I Y+ GQ QK + M++AG
Sbjct: 358 LIDAYARAGLMDRLEALYQEMRDCDIRPNTYMYARMITIYRDTGQWQKGVKLLREMQQAG 417
Query: 341 LEPSDKCVALILSACEKENQLNRA 364
+ P +I++ + QL +A
Sbjct: 418 VTPDAHVYNVIINTFGRTRQLEQA 441
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 88/225 (39%), Gaps = 35/225 (15%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN--------LKMA 224
Y II+ +G+ Q++ A M+ G D V+ ++ KAG KM
Sbjct: 425 YNVIINTFGRTRQLEQARIAFFKMQDGGIEPDVVSWNSLIDACCKAGQPLEARKLYYKMV 484
Query: 225 E---------------------------ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLD 257
E EE++ G + +Y ++V Y +A +
Sbjct: 485 NDGCAPTAQTFNIVIHGLGEHKRWNDVNEMVEEMRSKGMFPNVVTYTTLVDVYAQARLFQ 544
Query: 258 RGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
L+ M + Y AL Y+ G E V + ++ I + M LLI
Sbjct: 545 DAVECLQTMKEDGMGPSPTAYSALANAYAQLGMCEQTLHVLQTMEKENIEINLAMLNLLI 604
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLN 362
NA+ MAG+SQ+A+ F+ +++AGL ++ A + +L+
Sbjct: 605 NAFSMAGRSQEAFAVFEYIKEAGLTADKITYTTLMKALIRAEKLD 649
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 64/150 (42%), Gaps = 7/150 (4%)
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS-QKAYTAFQNM 336
Y AL+ Y+ N + A ++ G PD +I A + + FQ M
Sbjct: 179 YNALVGAYAQNRDYGKALETLSKMKTLGFPPDVVSYTHVIQACRHGVVDIYTGFRLFQEM 238
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVV 396
+ G++ K ++ AC + ++ N + FL L+ G + +++ +L + G
Sbjct: 239 QAEGVQVDGKVYNDLIFACGQAHKPNEGMFFLEKLQASGLVADRDSYISLMLSLGKHGRT 298
Query: 397 EEVEHVLRE---YGLR---ETYSKIPGSRS 420
E E +L E YGLR + Y+ + G S
Sbjct: 299 AEAEALLEEMKWYGLRPNLKAYNTLLGGYS 328
>gi|242054883|ref|XP_002456587.1| hypothetical protein SORBIDRAFT_03g038900 [Sorghum bicolor]
gi|241928562|gb|EES01707.1| hypothetical protein SORBIDRAFT_03g038900 [Sorghum bicolor]
Length = 655
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 122/273 (44%), Gaps = 33/273 (12%)
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA 224
S + N+ Y +I YGK ++ + A + M+ G D +T + ++ ++ KAG L A
Sbjct: 371 SVKPNVVTYNTMIAIYGKSLEDEKAGKLVQDMQAIGVQPDAITYSTILSIWVKAGKLDRA 430
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE-------------- 270
+ FE+++ G +D Y +MV+AY RAG++ + + LLR++ E
Sbjct: 431 AKLFEKLREAGTEIDPVLYQTMVVAYERAGLVSQAKRLLRDLKDPEGIPKETAIKILASA 490
Query: 271 -------------VYVG----SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
G S V++A++ Y+ N VF+ ++ G PD+
Sbjct: 491 GRLEEAAWLFRRAANTGEIKDSSVHRAMMDLYAKNRRHRNVIEVFDEMRKLGQLPDSETI 550
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLI-DLE 372
A +NAY KA +Q MR+ G SD+ ++S + +ALE L+ +L
Sbjct: 551 ATAMNAYGKLKDFDKAAALYQAMREEGCVFSDRVHFQMISLLGAQKDF-KALEVLVGELS 609
Query: 373 RDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
D + +E A ++R ++ H++ +
Sbjct: 610 HDPSIDKRELYLVAAGVYERAYKFDKASHIINQ 642
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 88/209 (42%), Gaps = 37/209 (17%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA-------E 225
Y ++ + ++ A LL M+ RG D + + ++ ++AG+L A E
Sbjct: 123 YNLLLRSSCRAGDLRLASGLLLEMRERGVTPDAFSYSTLLAALTRAGHLDHALTFLPLME 182
Query: 226 ET----------------------------FEEIKLLGEPLDKRSYGSMVMAYVRAGML- 256
+ F ++ G D ++Y + V AY ++ ++
Sbjct: 183 DDAVAPDLILFSNLIHLALRGGDAPKALALFSRLRAAGIRPDLKAYNAAVAAYCKSDLIR 242
Query: 257 DRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQ-FAGITPDARMCAL 315
D +LL +M A V +E Y +L + G A +F ++ A + PD + +
Sbjct: 243 DAKRLLLHDMPADGVAPDAETYSPILAALARRGRHLAAVSLFSHMRAVARVKPDLSVFNI 302
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
++NAY +++A F +MR+AG+ PS
Sbjct: 303 ILNAYGQLDLAREADRLFWSMRRAGVPPS 331
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 129/324 (39%), Gaps = 34/324 (10%)
Query: 113 VSPETGNLSDLLAAWVR---------FMKPRRADWLAVLKQLKLMEHPLYLQV------A 157
V+P+ + S LLAA R F+ D AV L L + ++L +
Sbjct: 151 VTPDAFSYSTLLAALTRAGHLDHALTFLPLMEDD--AVAPDLILFSNLIHLALRGGDAPK 208
Query: 158 ELALLEESFEANIRD----YTKIIHGYGKKMQIQNAENTLLA-MKRRGFICDQVTLTVMV 212
LAL A IR Y + Y K I++A+ LL M G D T + ++
Sbjct: 209 ALALFSRLRAAGIRPDLKAYNAAVAAYCKSDLIRDAKRLLLHDMPADGVAPDAETYSPIL 268
Query: 213 VMYSKAGNLKMAEETFEEIKLLG--EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE 270
++ G A F ++ + +P D + ++ AY + + + L M
Sbjct: 269 AALARRGRHLAAVSLFSHMRAVARVKP-DLSVFNIILNAYGQLDLAREADRLFWSMRRAG 327
Query: 271 VYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAG---------ITPDARMCALLINAYQ 321
V Y +LR Y G A +F+ ++ A + P+ +I Y
Sbjct: 328 VPPSVVTYNTMLRVYGDAGLFGEAVHLFDLMRSASDGNGGAGSSVKPNVVTYNTMIAIYG 387
Query: 322 MAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKE 381
+ + +KA Q+M+ G++P + ILS K +L+RA + L G +
Sbjct: 388 KSLEDEKAGKLVQDMQAIGVQPDAITYSTILSIWVKAGKLDRAAKLFEKLREAGTEIDPV 447
Query: 382 ASCTLAAWFKRLGVVEEVEHVLRE 405
T+ ++R G+V + + +LR+
Sbjct: 448 LYQTMVVAYERAGLVSQAKRLLRD 471
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 9/149 (6%)
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMD----AQEVY 272
+AG+L++A E++ G D SY +++ A RAG LD L M+ A ++
Sbjct: 132 RAGDLRLASGLLLEMRERGVTPDAFSYSTLLAALTRAGHLDHALTFLPLMEDDAVAPDLI 191
Query: 273 VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA-YT 331
+ S + LRG G++ A +F ++ AGI PD + + AY + + A
Sbjct: 192 LFSNLIHLALRG----GDAPKALALFSRLRAAGIRPDLKAYNAAVAAYCKSDLIRDAKRL 247
Query: 332 AFQNMRKAGLEPSDKCVALILSACEKENQ 360
+M G+ P + + IL+A + +
Sbjct: 248 LLHDMPADGVAPDAETYSPILAALARRGR 276
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 63/153 (41%), Gaps = 1/153 (0%)
Query: 243 YGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQ 302
Y ++ + RAG L LL EM + V + Y LL + G+ + A ++
Sbjct: 123 YNLLLRSSCRAGDLRLASGLLLEMRERGVTPDAFSYSTLLAALTRAGHLDHALTFLPLME 182
Query: 303 FAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLN 362
+ PD + + LI+ G + KA F +R AG+ P K ++A K + +
Sbjct: 183 DDAVAPDLILFSNLIHLALRGGDAPKALALFSRLRAAGIRPDLKAYNAAVAAYCKSDLIR 242
Query: 363 RALEFLI-DLERDGFMVGKEASCTLAAWFKRLG 394
A L+ D+ DG E + A R G
Sbjct: 243 DAKRLLLHDMPADGVAPDAETYSPILAALARRG 275
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 109/237 (45%), Gaps = 1/237 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ YT +I G+ K+ + A + + R + D T +V++ S+ G + A F
Sbjct: 564 NVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIF 623
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++ G + +Y S++ + G +D+ LL EM + + Y L+ G
Sbjct: 624 SELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKA 683
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G E A+ +F+ I+ G+TP+ A +++ Y + A+ + M G+ P
Sbjct: 684 GEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIY 743
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+IL+ C KE + +AL+ ++ GF + TL + + G ++E H+L E
Sbjct: 744 NVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEE 799
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 105/233 (45%), Gaps = 3/233 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y I++ K+ + + A + M +GF V+ ++ Y K+G L+ A EE+
Sbjct: 743 YNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMI 801
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ +Y S++ +AGM+ + L EM + V ++ Y +LL GY GN
Sbjct: 802 EKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMS 861
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV-ALI 351
+FE + GI PD ++I+AY G +A + G+ S ALI
Sbjct: 862 EVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALI 921
Query: 352 LSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
+ C+KE + L+ L ++ GF +G +A F+ G ++E VLR
Sbjct: 922 QALCKKE-EFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLR 973
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 91/214 (42%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E+ ++ Y +I G+ K +++ A L+ M R + T + YSKAG ++
Sbjct: 488 EQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEME 547
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
+A+ F E+ G + Y +++ + + G + + R + ++ V + Y L+
Sbjct: 548 IADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLI 607
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G S NG A +F +Q G+ P+A LI+ G KA + M G+
Sbjct: 608 HGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGIN 667
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
P +++ K ++ RA D+E G
Sbjct: 668 PDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGL 701
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 93/203 (45%), Gaps = 3/203 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G+ ++ I+ A M G + + ++ KAG ++ A E +E+
Sbjct: 323 YNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMM 382
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D ++Y ++ + R + R LL EM +++ Y ++ G GN +
Sbjct: 383 EKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQ 442
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV-ALI 351
G + + G+ P+A + L+ A+ G+ +++ + MR+ G+ P C +LI
Sbjct: 443 GTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLI 502
Query: 352 LSACEKENQLNRALEFLID-LER 373
+ C K ++ A +L++ LER
Sbjct: 503 IGFC-KAKRMEEARTYLMEMLER 524
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 88/200 (44%), Gaps = 1/200 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E+ E + + Y+ +I G+ + + A L MK+R +T +V++ + GN
Sbjct: 381 MMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGN 440
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ E+ + G + Y +++ A+ + G ++ ++L M Q + Y +
Sbjct: 441 LQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNS 500
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G+ E A+ + + P+A I+ Y AG+ + A F M G
Sbjct: 501 LIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCG 560
Query: 341 LEPSDKC-VALILSACEKEN 359
+ P+ ALI C++ N
Sbjct: 561 VLPNVGIYTALIEGHCKEGN 580
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 107/256 (41%), Gaps = 9/256 (3%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMV---VMY 215
L + E+ N+ Y II G + + A +M +G + D T +++ M
Sbjct: 239 LEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCME 298
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
++ K+ ++ L EP+ +Y +++ ++R G +++ + EM A +
Sbjct: 299 KRSREAKLMLLEMIDVGLKPEPI---TYNALIDGFMRQGDIEQAFRIKDEMVACGIEANL 355
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
++ LL G G E A + + + G+ PD++ +LLI + +A+
Sbjct: 356 IIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDE 415
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGV 395
M+K L P+ ++I++ + L L ++ +G TL + G
Sbjct: 416 MKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGR 475
Query: 396 VEEVEHVL---REYGL 408
VEE +L RE G+
Sbjct: 476 VEESRMILERMREQGI 491
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 97/239 (40%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
EAN+ + +++G K +++ A + M +G D T ++++ + + N+ A
Sbjct: 351 IEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAF 410
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
E +E+K +Y ++ R G L +LREM + + VY L+ +
Sbjct: 411 ELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAH 470
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
+ G E ++ + E ++ GI PD LI + A + ++A T M + L P+
Sbjct: 471 AKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNA 530
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
+ K ++ A + ++ G + L + G V E V R
Sbjct: 531 HTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFR 589
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 73/178 (41%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
L + E + + YT ++HGY + M +G D++T VM+ Y +
Sbjct: 833 LEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCRE 892
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
GN+ A + +EI + G P+ +Y +++ A + LL E+ +G
Sbjct: 893 GNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTC 952
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
+ RG+ + GN + A V ++ G + L++ Q S+ + + M
Sbjct: 953 SVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 1010
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 75/180 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E+ F N YT +I K + A+ L M+ R + T T ++ Y GN
Sbjct: 800 MIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGN 859
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ FEE+ G DK +Y M+ AY R G + L E+ + + + Y A
Sbjct: 860 MSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDA 919
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L++ ++ I +G C+++ +Q+AG +A ++M K G
Sbjct: 920 LIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFG 979
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 94/237 (39%), Gaps = 35/237 (14%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D T T M+ + K GN+K A+ E+ G + +Y ++ RA +LD L
Sbjct: 214 DVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELK 273
Query: 264 REMDAQ----EVY---------------------------VGSE----VYKALLRGYSMN 288
R M + ++Y VG + Y AL+ G+
Sbjct: 274 RSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQ 333
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G+ E A R+ + + GI + + L+N AG+ +KA Q M + G+EP +
Sbjct: 334 GDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTY 393
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+L++ + + RA E L ++++ + R G ++ +LRE
Sbjct: 394 SLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILRE 450
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/246 (17%), Positives = 107/246 (43%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+++++ ++ Y +I+G+ + + + A+ LL M G + +T ++ + + G
Sbjct: 275 SMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQG 334
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+++ A +E+ G + + +++ +AG +++ +++EM + V S+ Y
Sbjct: 335 DIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYS 394
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ G+ N A + + ++ + P +++IN G Q + M
Sbjct: 395 LLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMN 454
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEV 399
GL+P+ +++A KE ++ + L + G + +L F + +EE
Sbjct: 455 GLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEA 514
Query: 400 EHVLRE 405
L E
Sbjct: 515 RTYLME 520
>gi|224133318|ref|XP_002321537.1| predicted protein [Populus trichocarpa]
gi|222868533|gb|EEF05664.1| predicted protein [Populus trichocarpa]
Length = 834
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 88/183 (48%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I+ GK + A+ M +G + + VT +M+ + +KA N + A + + +++
Sbjct: 446 YSVMINCLGKAGHLAAADKLFCEMIEQGCVPNLVTYNIMIALQAKARNYQNALKLYRDMQ 505
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G DK +Y ++ +G LD E + EM + VY L+ + GN E
Sbjct: 506 NAGFEPDKVTYSIVMEVLGHSGYLDEAEAIFSEMKRKNWVPDEPVYGLLVDLWGKAGNVE 565
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A ++A+ AG+ P+ C L++A+ + AY Q+M GL PS + L+L
Sbjct: 566 KAWEWYQAMLHAGLCPNVPTCNSLLSAFLRVNRLPDAYNLLQSMLNLGLNPSLQTYTLLL 625
Query: 353 SAC 355
S C
Sbjct: 626 SCC 628
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 107/245 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + + + Y ++IH YG+ + +A M++ G D+VT ++ +++KAG
Sbjct: 364 MVRDGCQPTVVTYNRLIHSYGRANYLNDAVEVFNQMQKAGCEPDRVTYCTLIDIHAKAGF 423
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A E ++ ++ G D +Y M+ +AG L + L EM Q Y
Sbjct: 424 LNFAMEMYQRMQAAGLSPDTFTYSVMINCLGKAGHLAAADKLFCEMIEQGCVPNLVTYNI 483
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ + N + A +++ +Q AG PD ++++ +G +A F M++
Sbjct: 484 MIALQAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHSGYLDEAEAIFSEMKRKN 543
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
P + L++ K + +A E+ + G +L + F R+ + +
Sbjct: 544 WVPDEPVYGLLVDLWGKAGNVEKAWEWYQAMLHAGLCPNVPTCNSLLSAFLRVNRLPDAY 603
Query: 401 HVLRE 405
++L+
Sbjct: 604 NLLQS 608
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 107/258 (41%), Gaps = 2/258 (0%)
Query: 141 VLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRG 200
VLKQL+ +H + L F+ + YT ++ G+ Q L M R G
Sbjct: 311 VLKQLQ--DHTVALGFFHWLKQLPGFKHDGYTYTTMVGILGRAKQFVAINKLLDQMVRDG 368
Query: 201 FICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGE 260
VT ++ Y +A L A E F +++ G D+ +Y +++ + +AG L+
Sbjct: 369 CQPTVVTYNRLIHSYGRANYLNDAVEVFNQMQKAGCEPDRVTYCTLIDIHAKAGFLNFAM 428
Query: 261 VLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAY 320
+ + M A + + Y ++ G+ A ++F + G P+ ++I
Sbjct: 429 EMYQRMQAAGLSPDTFTYSVMINCLGKAGHLAAADKLFCEMIEQGCVPNLVTYNIMIALQ 488
Query: 321 QMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGK 380
A Q A +++M+ AG EP ++++ L+ A +++R ++ +
Sbjct: 489 AKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHSGYLDEAEAIFSEMKRKNWVPDE 548
Query: 381 EASCTLAAWFKRLGVVEE 398
L + + G VE+
Sbjct: 549 PVYGLLVDLWGKAGNVEK 566
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 50/101 (49%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
FE + Y+ ++ G + AE MKR+ ++ D+ ++V ++ KAGN++ A
Sbjct: 509 FEPDKVTYSIVMEVLGHSGYLDEAEAIFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAW 568
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
E ++ + G + + S++ A++R L LL+ M
Sbjct: 569 EWYQAMLHAGLCPNVPTCNSLLSAFLRVNRLPDAYNLLQSM 609
>gi|255540825|ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550592|gb|EEF52079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 754
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 100/211 (47%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++EE+ E N+ Y +I+ GK ++A+ LL M +G + T ++ Y +A +
Sbjct: 414 MVEENVEPNMGTYEGLIYACGKGGLHEDAKKILLHMDEKGIVPSTKAYTGVIEAYGQAAS 473
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A F + +G +Y S++ + R G+ E ++ +M V + +
Sbjct: 474 YEEALVMFNTMNEMGSKPTVETYNSLINMFARGGLYKESEAIMWKMGESGVARDRDSFNG 533
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ GY G E A + + ++ A PD R +++ Y AG ++ F+ +R +G
Sbjct: 534 VIEGYRQGGQFEEAIKTYVELEKARFQPDERTFEAVLSVYCTAGLVDESEEQFREIRASG 593
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDL 371
+ PS C ++++ + N+ + A E L ++
Sbjct: 594 ILPSVMCYCMMIAVYARSNRWDDAYEVLDEM 624
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 1/168 (0%)
Query: 209 TVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
T+++ + + G L+ + E FEE+ G P SY +++ +Y R G + LL M
Sbjct: 146 TIIISLLGREGLLEKSTEIFEEMPTHGVPRSVFSYTALINSYGRHGQYEVSLELLERMKK 205
Query: 269 QEVYVGSEVYKALLRGYSMNG-NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQ 327
++V Y ++ + G N EG +F ++ GI PD L+NA G
Sbjct: 206 EKVTPSILTYNTVINSCARGGLNWEGLLSLFAEMRHEGIQPDIITYNTLLNACANRGLGD 265
Query: 328 KAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+A F+ M + G+ P ++ K N+L + E L ++E G
Sbjct: 266 EAEMVFRTMNEGGMVPDITTYRNLVETFGKLNKLEKVSELLKEMESSG 313
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 88/220 (40%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E + +I Y +++ + AE M G + D T +V + K L+
Sbjct: 241 HEGIQPDIITYNTLLNACANRGLGDEAEMVFRTMNEGGMVPDITTYRNLVETFGKLNKLE 300
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
E +E++ G D SY ++ AY G + + R+M + Y LL
Sbjct: 301 KVSELLKEMESSGNLPDISSYNVLLEAYASKGDIRHAMGVFRQMQEARCVPNAVTYSMLL 360
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
Y +G + + +F ++ + PD +LI + G ++ T F +M + +E
Sbjct: 361 NLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEVFGEGGYFKEVVTLFHDMVEENVE 420
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEA 382
P+ ++ AC K A + L+ ++ G + +A
Sbjct: 421 PNMGTYEGLIYACGKGGLHEDAKKILLHMDEKGIVPSTKA 460
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/301 (19%), Positives = 121/301 (40%), Gaps = 33/301 (10%)
Query: 96 PRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQ 155
PR RC K + +L+D + F +R DW L+ K M+ ++ +
Sbjct: 89 PRGSIARCLEIFKNKL-------SLNDFALVFKEF--AQRGDWQRSLRLFKYMQRQIWCK 139
Query: 156 VAEL------------ALLEESFEA-----------NIRDYTKIIHGYGKKMQIQNAENT 192
E LLE+S E ++ YT +I+ YG+ Q + +
Sbjct: 140 PNEHIYTIIISLLGREGLLEKSTEIFEEMPTHGVPRSVFSYTALINSYGRHGQYEVSLEL 199
Query: 193 LLAMKRRGFICDQVTLTVMVVMYSKAG-NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYV 251
L MK+ +T ++ ++ G N + F E++ G D +Y +++ A
Sbjct: 200 LERMKKEKVTPSILTYNTVINSCARGGLNWEGLLSLFAEMRHEGIQPDIITYNTLLNACA 259
Query: 252 RAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDAR 311
G+ D E++ R M+ + Y+ L+ + E + + ++ +G PD
Sbjct: 260 NRGLGDEAEMVFRTMNEGGMVPDITTYRNLVETFGKLNKLEKVSELLKEMESSGNLPDIS 319
Query: 312 MCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDL 371
+L+ AY G + A F+ M++A P+ +++L+ + + E +++
Sbjct: 320 SYNVLLEAYASKGDIRHAMGVFRQMQEARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEM 379
Query: 372 E 372
+
Sbjct: 380 K 380
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 79/182 (43%), Gaps = 2/182 (1%)
Query: 164 ESFEANIRD-YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
ES A RD + +I GY + Q + A T + +++ F D+ T ++ +Y AG +
Sbjct: 521 ESGVARDRDSFNGVIEGYRQGGQFEEAIKTYVELEKARFQPDERTFEAVLSVYCTAGLVD 580
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
+EE F EI+ G Y M+ Y R+ D +L EM +V +V ++
Sbjct: 581 ESEEQFREIRASGILPSVMCYCMMIAVYARSNRWDDAYEVLDEMVTNKVSNIHQVVGKMM 640
Query: 283 RG-YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+G Y N + + VF+ + G R L+ A GQ ++A K GL
Sbjct: 641 KGDYDDYSNWQMVEYVFDKLNSEGCGLGMRFYNTLLEALWWLGQKERAARVLSEAIKRGL 700
Query: 342 EP 343
P
Sbjct: 701 FP 702
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/272 (18%), Positives = 100/272 (36%), Gaps = 35/272 (12%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I Y ++ Y K I++A M+ + + VT ++++ +Y G E F
Sbjct: 317 DISSYNVLLEAYASKGDIRHAMGVFRQMQEARCVPNAVTYSMLLNLYGGHGRYDDVRELF 376
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E+K+ D +Y ++ + G L +M + V Y+ L+
Sbjct: 377 LEMKVSNTEPDVGTYNVLIEVFGEGGYFKEVVTLFHDMVEENVEPNMGTYEGLIYACGKG 436
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS---- 344
G E A+++ + GI P + +I AY A ++A F M + G +P+
Sbjct: 437 GLHEDAKKILLHMDEKGIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETY 496
Query: 345 ------------------------DKCVAL-------ILSACEKENQLNRALEFLIDLER 373
+ VA ++ + Q A++ ++LE+
Sbjct: 497 NSLINMFARGGLYKESEAIMWKMGESGVARDRDSFNGVIEGYRQGGQFEEAIKTYVELEK 556
Query: 374 DGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
F + + + + G+V+E E RE
Sbjct: 557 ARFQPDERTFEAVLSVYCTAGLVDESEEQFRE 588
>gi|410110065|gb|AFV61112.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
citrodora]
Length = 435
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 108/219 (49%), Gaps = 4/219 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 220 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDR 279
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ Y +M++AY RAG++ + LL E+ + + + + +L
Sbjct: 280 AAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKSPD-NIPRDTAIHILA 338
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + + A F MR G P
Sbjct: 339 G---AGRIEEATYVFRQAIDAGEVKDITVFERMIHLFSKYKKYANAVEVFDKMRGLGYFP 395
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEA 382
+AL+L+A K ++L++A + ++++ G + E
Sbjct: 396 DSNVIALVLNAYGKLHELDKANDVYMEMQEVGCVFSDEV 434
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 101/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + MK G + + + + ++ MY + A
Sbjct: 82 FTPDLVAYNAMINVFGKAKLFREARALISEMKTAGVMPNTASYSTLLTMYVENKKFIEAL 141
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 142 SVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIETNVVSYNTLLRVY 201
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + ++ Y + +KA Q M+ G+E
Sbjct: 202 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIE 258
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 259 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRL 318
Query: 403 LRE 405
L E
Sbjct: 319 LHE 321
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 101/237 (42%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 120 NTASYSTLLTMYVENKKFIEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 179
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 180 WGMRKMGIETNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 239
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G+E
Sbjct: 240 LEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLY 299
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+ + A LA G +EE +V R+
Sbjct: 300 QTMIVAYERAGLVAHAKRLLHELKSPDNIPRDTAIHILAG----AGRIEEATYVFRQ 352
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 83/195 (42%), Gaps = 5/195 (2%)
Query: 150 HPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLT 209
H L+ ++ E AL + + Y+ +I +GK+ A + L M++ D V +
Sbjct: 1 HGLFDEMRERALSPDRYT-----YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYS 55
Query: 210 VMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQ 269
++ + K + A F +K G D +Y +M+ + +A + L+ EM
Sbjct: 56 NLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARALISEMKTA 115
Query: 270 EVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
V + Y LL Y N A VF ++ D C ++I+ Y G +++A
Sbjct: 116 GVMPNTASYSTLLTMYVENKKFIEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEA 175
Query: 330 YTAFQNMRKAGLEPS 344
F MRK G+E +
Sbjct: 176 DKLFWGMRKMGIETN 190
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 33/183 (18%), Positives = 80/183 (43%), Gaps = 2/183 (1%)
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
F+E++ D+ +Y +++ + + G+ D L++M+ V +Y L+
Sbjct: 4 FDEMRERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRK 63
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
+ A +F ++ +G TPD +IN + A ++A M+ AG+ P+
Sbjct: 64 LCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARALISEMKTAGVMPNTAS 123
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYG 407
+ +L+ + + AL ++ ++ + + +LG+ +E + + +G
Sbjct: 124 YSTLLTMYVENKKFIEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF--WG 181
Query: 408 LRE 410
+R+
Sbjct: 182 MRK 184
>gi|297734042|emb|CBI15289.3| unnamed protein product [Vitis vinifera]
Length = 793
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 5/204 (2%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
+Y ++ E L ++F Y+ II+ GK + +A M +G + + VT +M
Sbjct: 480 MYQKMQEAHLSPDTFT-----YSVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIM 534
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ + +KA N A E + +++ G DK +Y ++ G L+ E + EM +
Sbjct: 535 IALQAKARNYPTALELYRDMQNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNW 594
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
VY L+ + GN E + ++A+ AG+ P+ C L++A+ + AY
Sbjct: 595 VPDEPVYGLLVDLWGKVGNVEKSWEWYQAMLNAGLCPNVPTCNSLLSAFLRVHRLSDAYN 654
Query: 332 AFQNMRKAGLEPSDKCVALILSAC 355
Q+M + GL+PS + L+LS C
Sbjct: 655 LLQSMLRLGLQPSLQTYTLLLSCC 678
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/245 (19%), Positives = 104/245 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + + N+ Y ++IH YG+ + A + M+ G D+VT ++ +++KAG
Sbjct: 414 MVRDGCQPNVVTYNRLIHSYGRANYLNEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGF 473
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L +A +++++ D +Y ++ +AG L L EM Q Y
Sbjct: 474 LDVALHMYQKMQEAHLSPDTFTYSVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNI 533
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ + N A ++ +Q AG PD ++++ G ++A F M++
Sbjct: 534 MIALQAKARNYPTALELYRDMQNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKN 593
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
P + L++ K + ++ E+ + G +L + F R+ + +
Sbjct: 594 WVPDEPVYGLLVDLWGKVGNVEKSWEWYQAMLNAGLCPNVPTCNSLLSAFLRVHRLSDAY 653
Query: 401 HVLRE 405
++L+
Sbjct: 654 NLLQS 658
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 112/259 (43%), Gaps = 4/259 (1%)
Query: 141 VLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLA-MKRR 199
VLKQ++ +HP+ L + F+ + YT ++ G+ Q A N LLA M R
Sbjct: 361 VLKQIQ--DHPVALGFFYWLKRQTGFKHDGHTYTTMVGILGRARQF-GAINKLLAEMVRD 417
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G + VT ++ Y +A L A F+ ++ G D+ +Y +++ + +AG LD
Sbjct: 418 GCQPNVVTYNRLIHSYGRANYLNEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVA 477
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+ ++M + + Y ++ G+ A ++F + G P+ ++I
Sbjct: 478 LHMYQKMQEAHLSPDTFTYSVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIAL 537
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
A A +++M+ AG +P ++++ L A +++R ++
Sbjct: 538 QAKARNYPTALELYRDMQNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPD 597
Query: 380 KEASCTLAAWFKRLGVVEE 398
+ L + ++G VE+
Sbjct: 598 EPVYGLLVDLWGKVGNVEK 616
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 83/209 (39%)
Query: 197 KRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGML 256
++ GF D T T MV + +A + E+ G + +Y ++ +Y RA L
Sbjct: 380 RQTGFKHDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLIHSYGRANYL 439
Query: 257 DRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALL 316
+ + M Y L+ ++ G + A +++ +Q A ++PD +++
Sbjct: 440 NEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVI 499
Query: 317 INAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
IN AG A+ F M G P+ ++++ K ALE D++ GF
Sbjct: 500 INCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAGF 559
Query: 377 MVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
K + G +EE E + E
Sbjct: 560 QPDKVTYSIVMEVLGHCGHLEEAEAIFTE 588
>gi|167998294|ref|XP_001751853.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696951|gb|EDQ83288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 657
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 105/244 (43%), Gaps = 1/244 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E +F N+ + ++ Y K + E +M G ++V ++ Y K K
Sbjct: 411 ENNFTPNVVSWCYLLKAYQKTGNWEKTEEIFHSMLNSGCPPNEVAWNSLLSAYEKGRQWK 470
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
T E+ + LG LD ++ + + A +AG E +R+M Y +L+
Sbjct: 471 RVLYTIEKQEELGVKLDVVAWSTTISALAKAGQWQLAEKKIRQMKQSGCQPNIVTYSSLI 530
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR-KAGL 341
+ Y G A+ VF+++ GI PD++ C L+ AY Q K F +M + G+
Sbjct: 531 KAYGDVGLWNKAESVFKSMLLEGIRPDSKACCALLRAYAKGRQLDKVMFFFDSMMPRYGI 590
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEH 401
+P A I AC + RA +++ ++E G TL ++ G V++
Sbjct: 591 KPDKYAYAAIFWACWTCGEWQRAADYMENMEAAGCTPDTMIYTTLITMYEAHGQVDKAME 650
Query: 402 VLRE 405
+L++
Sbjct: 651 ILKK 654
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 95/214 (44%), Gaps = 1/214 (0%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
++L N + ++ Y K Q + T+ + G D V + + +KAG
Sbjct: 443 SMLNSGCPPNEVAWNSLLSAYEKGRQWKRVLYTIEKQEELGVKLDVVAWSTTISALAKAG 502
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++AE+ ++K G + +Y S++ AY G+ ++ E + + M + + S+
Sbjct: 503 QWQLAEKKIRQMKQSGCQPNIVTYSSLIKAYGDVGLWNKAESVFKSMLLEGIRPDSKACC 562
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQ-FAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
ALLR Y+ + F+++ GI PD A + A G+ Q+A +NM
Sbjct: 563 ALLRAYAKGRQLDKVMFFFDSMMPRYGIKPDKYAYAAIFWACWTCGEWQRAADYMENMEA 622
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDLE 372
AG P +++ E Q+++A+E L ++
Sbjct: 623 AGCTPDTMIYTTLITMYEAHGQVDKAMEILKKMD 656
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 69/180 (38%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
MK G D +T +V + AG K A+ ++ G + M A RA
Sbjct: 269 MKELGLAPDNITFRGLVSATTAAGKWKAAQSFINLMQAGGFSFAIGEFTEMQWACARARN 328
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
LL+ M Q E Y ALL Y N E A R IQ G TPD +
Sbjct: 329 SRESLGLLQAMIEQGCEPRLENYNALLCAYEKTANWEEAVRTVVWIQEKGFTPDFITWSS 388
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
L+ A AGQ++KA + M++ P+ +L A +K + E + G
Sbjct: 389 LLGACANAGQAEKAVAVMEKMKENNFTPNVVSWCYLLKAYQKTGNWEKTEEIFHSMLNSG 448
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 96/247 (38%), Gaps = 4/247 (1%)
Query: 160 ALLEESFEANIRDYTKIIH--GYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSK 217
A S E N T +I GYG+++ A M+++G T ++V +
Sbjct: 198 AFRSASVEPNAHVCTTLIAVLGYGRRLP--EALKLFRWMEKQGIERPIYTFNALMVACGR 255
Query: 218 AGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
G A E FEE+K LG D ++ +V A AG + + M A
Sbjct: 256 CGAGDTAVELFEEMKELGLAPDNITFRGLVSATTAAGKWKAAQSFINLMQAGGFSFAIGE 315
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
+ + + NS + + +A+ G P L+ AY+ ++A ++
Sbjct: 316 FTEMQWACARARNSRESLGLLQAMIEQGCEPRLENYNALLCAYEKTANWEEAVRTVVWIQ 375
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
+ G P + +L AC Q +A+ + ++ + F + C L +++ G E
Sbjct: 376 EKGFTPDFITWSSLLGACANAGQAEKAVAVMEKMKENNFTPNVVSWCYLLKAYQKTGNWE 435
Query: 398 EVEHVLR 404
+ E +
Sbjct: 436 KTEEIFH 442
>gi|218197756|gb|EEC80183.1| hypothetical protein OsI_22045 [Oryza sativa Indica Group]
Length = 577
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 108/221 (48%), Gaps = 3/221 (1%)
Query: 155 QVAEL---ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
Q AEL L+E+ F+ + Y +++ + K+ ++ E + + GF D +T M
Sbjct: 118 QEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTM 177
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ MY K G L +A ++E++ +G D +Y +V + + + +L EM +
Sbjct: 178 IHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGL 237
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
+ AL+ Y+ +G + A+R F+ + +G+ PD ++++ + + +++K
Sbjct: 238 KPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMV 297
Query: 332 AFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLE 372
++ M K G +P D ++L+A K N+ + + D+E
Sbjct: 298 LYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDME 338
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 107/251 (42%), Gaps = 4/251 (1%)
Query: 159 LALLEESFEANIR----DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
+A+ EE + R Y ++ +G+ + Q AE + +GF D VT ++
Sbjct: 86 VAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYA 145
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
++K G+++ E EE+ G D +Y +M+ Y + G LD L EM A
Sbjct: 146 FAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPD 205
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+ Y L+ A +V E + AG+ P + LI AY +G+ A F
Sbjct: 206 AVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFD 265
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
M ++G++P ++L + ++ + + + +DG+ L A +
Sbjct: 266 RMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGN 325
Query: 395 VVEEVEHVLRE 405
+E+E V+++
Sbjct: 326 EHDEIEGVIQD 336
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 95/237 (40%), Gaps = 5/237 (2%)
Query: 180 YGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK--MAEETFEEIKLLGEP 237
Y + + +A L AM+ + D V+ ++ +K+G L +A E E++ G
Sbjct: 4 YARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQAGLR 63
Query: 238 LDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRV 297
D +Y +++ A + LD + EM A E Y A++ + G ++ A+ +
Sbjct: 64 PDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELM 123
Query: 298 FEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEK 357
F+ + G PDA L+ A+ G ++ + + KAG ++ K
Sbjct: 124 FKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGK 183
Query: 358 ENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREY---GLRET 411
+L+ AL ++ G L ++ + E VL E GL+ T
Sbjct: 184 MGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPT 240
>gi|428179975|gb|EKX48844.1| hypothetical protein GUITHDRAFT_68401 [Guillardia theta CCMP2712]
Length = 396
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 91/185 (49%), Gaps = 3/185 (1%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ E + +T ++ GY K + E+ L M++ + D +++++ + G+
Sbjct: 72 MISSGIEPTLATFTTLMKGYAKYGNHEALEHYLEIMQQENIMIDSYIVSILIDSFVNKGD 131
Query: 221 LKMAEETFEEIKLLGEP--LDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
++ AE E K +P L Y S++ Y R GM+DR L+ EM ++++ V + Y
Sbjct: 132 MERAEAILRE-KEAEDPSLLSSHLYASLIKGYGRKGMIDRCMALMEEMKSKQLKVSAVPY 190
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
L+ + + AQ+ E ++ AGI P LLI+ + AG +A AF+ M +
Sbjct: 191 NTLISALLESKRMDQAQKTLEQMEEAGIQPSVVTYTLLIHEFSSAGNVAQAQAAFETMER 250
Query: 339 AGLEP 343
+G+ P
Sbjct: 251 SGIFP 255
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/192 (19%), Positives = 78/192 (40%), Gaps = 9/192 (4%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I GYG+K I + MK + V ++ ++ + A++T E+++
Sbjct: 155 YASLIKGYGRKGMIDRCMALMEEMKSKQLKVSAVPYNTLISALLESKRMDQAQKTLEQME 214
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G +Y ++ + AG + + + M+ ++ + Y ALL GY+ G +
Sbjct: 215 EAGIQPSVVTYTLLIHEFSSAGNVAQAQAAFETMERSGIFPDTGAYNALLDGYASLGQTA 274
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA---------YTAFQNMRKAGLEP 343
+ +F + + P +++I + S A + +R+ L+P
Sbjct: 275 RMKEIFWKLMQSANKPSIETYSIMIKCLLHSDASDDAKKSENLRECMSFLDQIREENLKP 334
Query: 344 SDKCVALILSAC 355
S ++SAC
Sbjct: 335 SASFFNSLISAC 346
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 113/280 (40%), Gaps = 35/280 (12%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
LL + F NI +IHG K +Q L M RG + D++T ++ K G
Sbjct: 492 LLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGK 551
Query: 221 LKMAEETFEEIKLLG------------------EPLDKRS-----------------YGS 245
+K E EE+ G + +D+ S YG
Sbjct: 552 VKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGV 611
Query: 246 MVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAG 305
M+ Y +A ++ GE LL E+ ++++ + S VY +L+R Y +NGN A R+ + ++ G
Sbjct: 612 MIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRG 671
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
+ + L++ G A MRK GL P+ C I+ K Q+N+
Sbjct: 672 VLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVN 731
Query: 366 EFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
L ++ K + F +LG +E +L E
Sbjct: 732 IVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNE 771
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 98/245 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++++ + +I + ++HG +I A K+ G++ + T VM+ Y KA
Sbjct: 562 MVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANK 621
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ E E+ L+ Y S++ AY G ++ L +M ++ V + Y +
Sbjct: 622 VEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSS 681
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G G + A+ + + ++ G+ P+ +I Y GQ K Q M
Sbjct: 682 LMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHN 741
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+ P+ +++ K + A + L ++ G + + G VEE
Sbjct: 742 IHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAF 801
Query: 401 HVLRE 405
V E
Sbjct: 802 KVCDE 806
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 61/147 (41%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ ++HG + +A++ L M++ G + + V T ++ YSK G + +E+
Sbjct: 679 YSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMS 738
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+K +Y M+ + + G LL EM + + + Y A G G E
Sbjct: 739 SHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVE 798
Query: 293 GAQRVFEAIQFAGITPDARMCALLINA 319
A +V + + + D LI+
Sbjct: 799 EAFKVCDEMSSGAVCLDEITYTTLIDG 825
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 41/238 (17%), Positives = 97/238 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++E ++ Y+ I+G K +I A L M GF+ ++V ++ Y K GN
Sbjct: 317 MVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGN 376
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + +++ G + + S++ + ++ + + E +L EM + + + +
Sbjct: 377 ISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSM 436
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ + A + + P+ + L++ AG+ +A + + G
Sbjct: 437 VINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKG 496
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
P+ ++ K + L+ L D+ G + + TL + + G V+E
Sbjct: 497 FVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKE 554
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 96/237 (40%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y IIHG K ++ A M + +T +V + K + A
Sbjct: 290 NVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVL 349
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+ LG ++ Y +++ Y + G + + +M ++ + S +L++G+ +
Sbjct: 350 KEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKS 409
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
A+ V E + G+ + +++IN + + A + M L P+D +
Sbjct: 410 DQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLL 469
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++S K + A+E L GF+ S L + G ++E +LR+
Sbjct: 470 TTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRD 526
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 49/122 (40%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+E N+ YT II GY K Q+ L M ++ T T+M+ + K G K
Sbjct: 704 KEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTK 763
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A + E+ G D +Y + + G ++ + EM + V + Y L+
Sbjct: 764 EAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLI 823
Query: 283 RG 284
G
Sbjct: 824 DG 825
>gi|307103654|gb|EFN51912.1| hypothetical protein CHLNCDRAFT_59068 [Chlorella variabilis]
Length = 1025
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 118/264 (44%), Gaps = 20/264 (7%)
Query: 116 ETGNLSDLLAAWVRFMKPRRA----DWLAVLKQLKLMEHPLYLQVAELALLEESFEANIR 171
++G L+ LL + RRA DWL L H LY N
Sbjct: 153 DSGALAALLKELNKSGHVRRAQELFDWLRGLDD----SHDLYPLC------------NTM 196
Query: 172 DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEI 231
YT +I G + Q++ A + M+ RG C+ T + ++ + K L +A + + ++
Sbjct: 197 TYTTMISQCGTQQQLRRALELVAEMRSRGIQCNVHTYSALMNVCIKGNELDLALDVYRQM 256
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
G + +Y +++ Y + G + +L ++ Q + Y ++ +M+G +
Sbjct: 257 LAEGCTPNLVTYNTLIDVYGKTGAWEEAIRVLDALERQGIDPEIRTYNTVIIACNMSGQA 316
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALI 351
+ A R++E + AG P A LI+AY GQ +A FQ+M + G E + + +
Sbjct: 317 QEALRIYERMLAAGAQPTATTYTALISAYGKNGQLDRALQIFQDMVRRGCERNVITYSSL 376
Query: 352 LSACEKENQLNRALEFLIDLERDG 375
+SACEK + ALE ++ +G
Sbjct: 377 ISACEKAGRWELALELFREMHTEG 400
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 81/195 (41%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
AL + + IR Y +I Q Q A M G T T ++ Y K G
Sbjct: 290 ALERQGIDPEIRTYNTVIIACNMSGQAQEALRIYERMLAAGAQPTATTYTALISAYGKNG 349
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
L A + F+++ G + +Y S++ A +AG + L REM + Y
Sbjct: 350 QLDRALQIFQDMVRRGCERNVITYSSLISACEKAGRWELALELFREMHTEGCRPNVVTYN 409
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
+L+ + E AQ +FE +Q G PDA LI AY AG ++A TAF+ M+
Sbjct: 410 SLIAACAQGAQWEKAQEMFEQMQHRGCKPDAVTFGGLIAAYDRAGHWRRALTAFEQMKAH 469
Query: 340 GLEPSDKCVALILSA 354
P I+ A
Sbjct: 470 NCRPDSVVYNTIVGA 484
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 87/205 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L E N+ Y +I YGK + A L A++R+G + T +++ + +G
Sbjct: 256 MLAEGCTPNLVTYNTLIDVYGKTGAWEEAIRVLDALERQGIDPEIRTYNTVIIACNMSGQ 315
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A +E + G +Y +++ AY + G LDR + ++M + Y +
Sbjct: 316 AQEALRIYERMLAAGAQPTATTYTALISAYGKNGQLDRALQIFQDMVRRGCERNVITYSS 375
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G E A +F + G P+ LI A Q +KA F+ M+ G
Sbjct: 376 LISACEKAGRWELALELFREMHTEGCRPNVVTYNSLIAACAQGAQWEKAQEMFEQMQHRG 435
Query: 341 LEPSDKCVALILSACEKENQLNRAL 365
+P +++A ++ RAL
Sbjct: 436 CKPDAVTFGGLIAAYDRAGHWRRAL 460
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 91/211 (43%)
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA 224
+ N+ Y+ +++ K ++ A + M G + VT ++ +Y K G + A
Sbjct: 225 GIQCNVHTYSALMNVCIKGNELDLALDVYRQMLAEGCTPNLVTYNTLIDVYGKTGAWEEA 284
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
+ ++ G + R+Y ++++A +G + M A + Y AL+
Sbjct: 285 IRVLDALERQGIDPEIRTYNTVIIACNMSGQAQEALRIYERMLAAGAQPTATTYTALISA 344
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
Y NG + A ++F+ + G + + LI+A + AG+ + A F+ M G P+
Sbjct: 345 YGKNGQLDRALQIFQDMVRRGCERNVITYSSLISACEKAGRWELALELFREMHTEGCRPN 404
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDG 375
+++AC + Q +A E ++ G
Sbjct: 405 VVTYNSLIAACAQGAQWEKAQEMFEQMQHRG 435
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 42/93 (45%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
E N+ Y +I + Q + A+ M+ RG D VT ++ Y +AG+ +
Sbjct: 399 EGCRPNVVTYNSLIAACAQGAQWEKAQEMFEQMQHRGCKPDAVTFGGLIAAYDRAGHWRR 458
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGML 256
A FE++K D Y ++V A + G++
Sbjct: 459 ALTAFEQMKAHNCRPDSVVYNTIVGALWKTGLV 491
>gi|255661190|gb|ACU25764.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 426
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 106/218 (48%), Gaps = 4/218 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++SK G L
Sbjct: 213 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWSKIGKLDR 272
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ Y +M++AY RAG++ + LL E+ + + + +L
Sbjct: 273 AAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDTAIHILA 331
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G +G E A VF AG D + +I+ + + F MR G P
Sbjct: 332 G---SGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYSNVVEVFDKMRGLGYFP 388
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKE 381
AL+L+A K ++ ++A I+++ +G + E
Sbjct: 389 DSNVTALVLNAYGKLHEFDKANNVYIEMQDEGCLFSDE 426
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 103/243 (42%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + M+ G + + V+ + ++ MY + A
Sbjct: 75 FSPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTVSYSTLLTMYVENKKFLEAL 134
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 135 TVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 194
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + ++ Y + +KA Q M+ G+E
Sbjct: 195 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIE 251
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 252 PNSITYSTIISIWSKIGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRL 311
Query: 403 LRE 405
L E
Sbjct: 312 LHE 314
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 100/237 (42%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A M+ + D T +M+ +Y + G K A++ F
Sbjct: 113 NTVSYSTLLTMYVENKKFLEALTVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 172
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 173 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 232
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G+E
Sbjct: 233 LEHEKANNLIQEMQSRGIEPNSITYSTIISIWSKIGKLDRAAMLFQKLRSSGVEIDQVLY 292
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE V R+
Sbjct: 293 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGS----GRIEEATWVFRQ 345
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 73/172 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ A L M++ D V + ++ + K + A F +K
Sbjct: 12 YSTLITHFGKEGLFDAALAWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 71
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +M+ + +A + L+ EM V + Y LL Y N
Sbjct: 72 RSGFSPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTVSYSTLLTMYVENKKFL 131
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF ++ D C ++I+ Y G +++A F MRK G+EP+
Sbjct: 132 EALTVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
>gi|115436822|ref|NP_001043145.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|56201654|dbj|BAD73118.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113532676|dbj|BAF05059.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|125570544|gb|EAZ12059.1| hypothetical protein OsJ_01942 [Oryza sativa Japonica Group]
Length = 540
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 96/211 (45%), Gaps = 1/211 (0%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRG-FICDQVTLTVMVVMYSKAGNLKMA 224
+ ++ DY +I K Q++ A MKR+G FI D T TV++ + +L M
Sbjct: 219 LKTDLSDYNWLIDILSKSKQVKKAHAIFKEMKRKGRFIPDLKTYTVLMEGWGHEKDLLML 278
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
+ ++E+ G D +YG ++ A+ ++G D + EM+ VY L+ G
Sbjct: 279 KAVYQEMLDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYCMLING 338
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
+ A + F+ + +G + C +I AY A + A+ MRK+G+ P+
Sbjct: 339 LGSMERLDEALKYFQLSKESGFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPN 398
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDG 375
+ +IL+ K ++ A +ERDG
Sbjct: 399 TRTYDIILNHLIKSEKIEEAYNLFQRMERDG 429
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 101/215 (46%), Gaps = 2/215 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
++ F + + +I GK Q + + + AM+ R + + T ++V Y++A +K
Sbjct: 147 QQGFRYSAEGFHNLIEALGKIKQFRLVWSLVEAMRCRSCL-SKDTFKIIVRRYARARKVK 205
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS-EVYKAL 281
A ETFE++ G D Y ++ ++ + + + +EM + ++ + Y L
Sbjct: 206 EAVETFEKMSSFGLKTDLSDYNWLIDILSKSKQVKKAHAIFKEMKRKGRFIPDLKTYTVL 265
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+ G+ + + V++ + AGI PD +LI+A+ +G+ +A F M ++G
Sbjct: 266 MEGWGHEKDLLMLKAVYQEMLDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEMEESGC 325
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
PS ++++ +L+ AL++ + GF
Sbjct: 326 MPSPHVYCMLINGLGSMERLDEALKYFQLSKESGF 360
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 34/171 (19%), Positives = 72/171 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+G G ++ A K GF + T ++ Y +A A + +E++
Sbjct: 332 YCMLINGLGSMERLDEALKYFQLSKESGFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMR 391
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + R+Y ++ +++ ++ L + M+ Y ++ + N +
Sbjct: 392 KSGIGPNTRTYDIILNHLIKSEKIEEAYNLFQRMERDGCEPELNTYTMMVGMFCSNERVD 451
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
A +V++ ++ G+ P M + LIN + ++A FQ M G+ P
Sbjct: 452 MALKVWKQMKEKGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRP 502
>gi|125526112|gb|EAY74226.1| hypothetical protein OsI_02107 [Oryza sativa Indica Group]
Length = 540
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 96/211 (45%), Gaps = 1/211 (0%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRG-FICDQVTLTVMVVMYSKAGNLKMA 224
+ ++ DY +I K Q++ A MKR+G FI D T TV++ + +L M
Sbjct: 219 LKTDLSDYNWLIDILSKSKQVKKAHAIFKEMKRKGRFIPDLKTYTVLMEGWGHEKDLLML 278
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
+ ++E+ G D +YG ++ A+ ++G D + EM+ VY L+ G
Sbjct: 279 KAVYQEMLDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYCMLING 338
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
+ A + F+ + +G + C +I AY A + A+ MRK+G+ P+
Sbjct: 339 LGSMERLDEALKYFQLSKESGFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPN 398
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDG 375
+ +IL+ K ++ A +ERDG
Sbjct: 399 TRTYDIILNHLIKSEKIEEAYNLFQRMERDG 429
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 101/215 (46%), Gaps = 2/215 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
++ F + + +I GK Q + + + AM+ R + + T ++V Y++A +K
Sbjct: 147 QQGFRYSAEGFHNLIEALGKIKQFRLVWSLVEAMRCRSCL-SKDTFKIIVRRYARARKVK 205
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS-EVYKAL 281
A ETFE++ G D Y ++ ++ + + + +EM + ++ + Y L
Sbjct: 206 EAVETFEKMSSFGLKTDLSDYNWLIDILSKSKQVKKAHAIFKEMKRKGRFIPDLKTYTVL 265
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+ G+ + + V++ + AGI PD +LI+A+ +G+ +A F M ++G
Sbjct: 266 MEGWGHEKDLLMLKAVYQEMLDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEMEESGC 325
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
PS ++++ +L+ AL++ + GF
Sbjct: 326 MPSPHVYCMLINGLGSMERLDEALKYFQLSKESGF 360
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 34/171 (19%), Positives = 72/171 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+G G ++ A K GF + T ++ Y +A A + +E++
Sbjct: 332 YCMLINGLGSMERLDEALKYFQLSKESGFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMR 391
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + R+Y ++ +++ ++ L + M+ Y ++ + N +
Sbjct: 392 KSGIGPNTRTYDIILNHLIKSEKIEEAYNLFQRMERDGCEPELNTYTMMVGMFCSNERVD 451
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
A +V++ ++ G+ P M + LIN + ++A FQ M G+ P
Sbjct: 452 MALKVWKQMKEKGVLPCMHMFSALINGLCFDNRLEEACVYFQEMLDKGIRP 502
>gi|168062855|ref|XP_001783392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665090|gb|EDQ51786.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 540
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 111/253 (43%), Gaps = 8/253 (3%)
Query: 131 MKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIR----DYTKIIHGYGKKMQI 186
++P + +VL P+ + L EE E+N R Y +++ Y K
Sbjct: 265 LQPNELGYGSVLNAFMRANQPM----GAIKLFEEMQESNCRFGESTYITMLNVYSKAGFH 320
Query: 187 QNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSM 246
AE L M++ GF + V + ++ MY K G L+ A F +K G + Y +M
Sbjct: 321 SAAEELLAKMRQLGFRRNVVAYSTLIDMYGKVGKLQEATRLFSTMKQQGCKGNLIVYNTM 380
Query: 247 VMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGI 306
+ Y +AG ++ E L+ E+ ++ + Y L+ Y+ G E RVFE + G+
Sbjct: 381 LDMYGKAGRINDAERLMAELKDSKLVPDTVTYTTLINAYNRLGRFEECIRVFEQHRADGL 440
Query: 307 TPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALE 366
D + A++IN Y A Q K + M K+G++P + + ++ E A E
Sbjct: 441 KLDRILVAIMINVYGKARQYSKLAELLEVMPKSGIQPDTRILKTVVEIYEDGGMCENAAE 500
Query: 367 FLIDLERDGFMVG 379
L + G + G
Sbjct: 501 LLRKINELGPLEG 513
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 108/238 (45%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L +E + Y ++ K I TL M+ G DQV ++++ M+ KAG
Sbjct: 120 LKDEGLLPDSGTYCAVLSACRKVGNIDKGNETLKEMREAGIKPDQVAYSILIDMFGKAGR 179
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A TF E+++ G D +Y +++ A+ + GM+D+ ++ +E ++
Sbjct: 180 HEDAAATFRELQMSGYLPDSVAYNTLIHAFAKVGMVDQATLVFKEAQRSFCLDDPVIFYT 239
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+++ Y+ ++ A V + ++ G+ P+ ++NA+ A Q A F+ M+++
Sbjct: 240 MIQVYAKARMADQALHVLKLMKEIGLQPNELGYGSVLNAFMRANQPMGAIKLFEEMQESN 299
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
+ +L+ K + A E L + + GF A TL + ++G ++E
Sbjct: 300 CRFGESTYITMLNVYSKAGFHSAAEELLAKMRQLGFRRNVVAYSTLIDMYGKVGKLQE 357
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 103/244 (42%), Gaps = 3/244 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I Y +I YGK+ A +K G + D T ++ K GN+ ET
Sbjct: 93 DIVIYNILILEYGKRGNFSQAMKYFSQLKDEGLLPDSGTYCAVLSACRKVGNIDKGNETL 152
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E++ G D+ +Y ++ + +AG + RE+ S Y L+ ++
Sbjct: 153 KEMREAGIKPDQVAYSILIDMFGKAGRHEDAAATFRELQMSGYLPDSVAYNTLIHAFAKV 212
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A VF+ Q + D + +I Y A + +A + M++ GL+P++
Sbjct: 213 GMVDQATLVFKEAQRSFCLDDPVIFYTMIQVYAKARMADQALHVLKLMKEIGLQPNELGY 272
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL---RE 405
+L+A + NQ A++ +++ G+ T+ + + G E +L R+
Sbjct: 273 GSVLNAFMRANQPMGAIKLFEEMQESNCRFGESTYITMLNVYSKAGFHSAAEELLAKMRQ 332
Query: 406 YGLR 409
G R
Sbjct: 333 LGFR 336
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 112/276 (40%), Gaps = 15/276 (5%)
Query: 130 FMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNA 189
+ K R AD L LKLM+ E + N Y +++ + + Q A
Sbjct: 244 YAKARMAD--QALHVLKLMK-------------EIGLQPNELGYGSVLNAFMRANQPMGA 288
Query: 190 ENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMA 249
M+ + T M+ +YSKAG AEE +++ LG + +Y +++
Sbjct: 289 IKLFEEMQESNCRFGESTYITMLNVYSKAGFHSAAEELLAKMRQLGFRRNVVAYSTLIDM 348
Query: 250 YVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPD 309
Y + G L L M Q VY +L Y G A+R+ ++ + + PD
Sbjct: 349 YGKVGKLQEATRLFSTMKQQGCKGNLIVYNTMLDMYGKAGRINDAERLMAELKDSKLVPD 408
Query: 310 ARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLI 369
LINAY G+ ++ F+ R GL+ VA++++ K Q ++ E L
Sbjct: 409 TVTYTTLINAYNRLGRFEECIRVFEQHRADGLKLDRILVAIMINVYGKARQYSKLAELLE 468
Query: 370 DLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ + G T+ ++ G+ E +LR+
Sbjct: 469 VMPKSGIQPDTRILKTVVEIYEDGGMCENAAELLRK 504
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 99/237 (41%), Gaps = 6/237 (2%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +IH + K + A +R + D V M+ +Y+KA +MA++ +K
Sbjct: 202 YNTLIHAFAKVGMVDQATLVFKEAQRSFCLDDPVIFYTMIQVYAKA---RMADQALHVLK 258
Query: 233 LL---GEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
L+ G ++ YGS++ A++RA L EM G Y +L YS G
Sbjct: 259 LMKEIGLQPNELGYGSVLNAFMRANQPMGAIKLFEEMQESNCRFGESTYITMLNVYSKAG 318
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
A+ + ++ G + + LI+ Y G+ Q+A F M++ G + +
Sbjct: 319 FHSAAEELLAKMRQLGFRRNVVAYSTLIDMYGKVGKLQEATRLFSTMKQQGCKGNLIVYN 378
Query: 350 LILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREY 406
+L K ++N A + +L+ + TL + RLG EE V ++
Sbjct: 379 TMLDMYGKAGRINDAERLMAELKDSKLVPDTVTYTTLINAYNRLGRFEECIRVFEQH 435
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 86/195 (44%), Gaps = 3/195 (1%)
Query: 218 AGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
G + A+ F ++KLLG P D Y +++ Y + G + ++ + + S
Sbjct: 72 TGRFQTAQHWFSKMKLLGCPPDIVIYNILILEYGKRGNFSQAMKYFSQLKDEGLLPDSGT 131
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y A+L GN + + ++ AGI PD ++LI+ + AG+ + A F+ ++
Sbjct: 132 YCAVLSACRKVGNIDKGNETLKEMREAGIKPDQVAYSILIDMFGKAGRHEDAAATFRELQ 191
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
+G P ++ A K +++A + +R + T+ + + + +
Sbjct: 192 MSGYLPDSVAYNTLIHAFAKVGMVDQATLVFKEAQRSFCLDDPVIFYTMIQVYAKARMAD 251
Query: 398 EVEHVL---REYGLR 409
+ HVL +E GL+
Sbjct: 252 QALHVLKLMKEIGLQ 266
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 60/146 (41%)
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
E+L+ EM + + Y +++ G + AQ F ++ G PD + +LI
Sbjct: 44 EILVDEMIGKNCPPDIKFYALVIKEAINTGRFQTAQHWFSKMKLLGCPPDIVIYNILILE 103
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
Y G +A F ++ GL P +LSAC K +++ E L ++ G
Sbjct: 104 YGKRGNFSQAMKYFSQLKDEGLLPDSGTYCAVLSACRKVGNIDKGNETLKEMREAGIKPD 163
Query: 380 KEASCTLAAWFKRLGVVEEVEHVLRE 405
+ A L F + G E+ RE
Sbjct: 164 QVAYSILIDMFGKAGRHEDAAATFRE 189
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 90/174 (51%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I + +K Q+ NA L M +G + + +T ++ Y ++GN+ ++ +++
Sbjct: 477 YSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMR 536
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
D +Y +++ YV+ G + LL+ M+ + V + Y ++ G+S++GN +
Sbjct: 537 HDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQ 596
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
A V++ + GI PD +IN + +AG S+K++ M + GL P DK
Sbjct: 597 EADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPDDK 650
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 101/241 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y +++G K+ ++ +AE L MK RG D T T ++ Y + GN++ A + F
Sbjct: 368 DVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFF 427
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ I D +Y +++ R G L + L +M ++E++ Y L+ +
Sbjct: 428 DTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEK 487
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A + + GI P+ +I Y +G K MR + P
Sbjct: 488 GQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITY 547
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGL 408
++ KE +++ A L +E + + + F G ++E + V ++ G
Sbjct: 548 NTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGA 607
Query: 409 R 409
R
Sbjct: 608 R 608
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 84/194 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + E N ++H Y K +Q + + M++R D VT VMV +AG+
Sbjct: 150 VLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGD 209
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ A + + G +Y S++ +R G D+ + R MDA V +
Sbjct: 210 VEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNM 269
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G+ G E A R ++ ++ +TPD + LI + G+ A + MR+ G
Sbjct: 270 LIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFG 329
Query: 341 LEPSDKCVALILSA 354
L P +++
Sbjct: 330 LMPDGVIYTMVIGG 343
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 81/182 (44%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
++ +I Y +I G ++ + A M R + VT ++++ + + G +
Sbjct: 432 DQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVD 491
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A +E+ G + +Y S++ Y R+G + +G+ L +M +V Y L+
Sbjct: 492 NAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLI 551
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
GY G A + + ++ + PDA ++I+ + + G Q+A ++ M G+E
Sbjct: 552 HGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIE 611
Query: 343 PS 344
P
Sbjct: 612 PD 613
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 105/236 (44%), Gaps = 2/236 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ ++ +I + ++ ++ +A L M+ G + D V T+++ + +AG + A
Sbjct: 298 DVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVR 357
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+ G D +Y +++ + L E LL EM + V + L+ GY +
Sbjct: 358 DEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRD 417
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
GN E A + F+ I + PD LI+ G KA + +M + P+
Sbjct: 418 GNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTY 477
Query: 349 ALIL-SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
++++ S CEK Q++ A FL ++ G + ++ + R G V + + L
Sbjct: 478 SILIDSHCEK-GQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFL 532
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 95/232 (40%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I G+ + + A M G + D VT ++ K L AEE E+K
Sbjct: 337 YTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMK 396
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G P D ++ +++ Y R G +++ + Q + Y L+ G G+
Sbjct: 397 ERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLG 456
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +++ + I P+ ++LI+++ GQ A+ M G+ P+ I+
Sbjct: 457 KANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSII 516
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
+ +++ +FL + D M TL + + G + E ++L+
Sbjct: 517 KGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLK 568
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 89/218 (40%), Gaps = 8/218 (3%)
Query: 157 AELALLEESFEANIR----DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMV 212
A +AL++ I+ Y ++ G + + A AM G D + +++
Sbjct: 212 AAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLI 271
Query: 213 VMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY 272
+ +AG L+ A ++E++ D S+ ++ + R G +D LREM +
Sbjct: 272 GGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLM 331
Query: 273 VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTA 332
+Y ++ G+ G A RV + + G PD L+N + A
Sbjct: 332 PDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEEL 391
Query: 333 FQNMRKAGLEPSDKCV--ALILSACEKENQLNRALEFL 368
M++ G+ P D C LI C ++ + +AL+F
Sbjct: 392 LNEMKERGV-PPDLCTFTTLIHGYC-RDGNIEKALQFF 427
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 91/192 (47%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKL 233
T +I+ Y KK ++ A + +M +G + D T TV++ K G + AEE F E++
Sbjct: 564 TGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRG 623
Query: 234 LGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEG 293
G D SYG+++ + + G + + + EM + +Y LL G+ +G E
Sbjct: 624 KGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEK 683
Query: 294 AQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILS 353
A+ + + + G P+A +I+ Y +G +A+ F M+ GL P ++
Sbjct: 684 AKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVD 743
Query: 354 ACEKENQLNRAL 365
C + N + RA+
Sbjct: 744 GCCRLNDVERAI 755
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 113/278 (40%), Gaps = 16/278 (5%)
Query: 132 KPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAEN 191
K R D + VLK+++ E+ + Y +I G K ++ A +
Sbjct: 468 KSRFGDAVRVLKEMR----------------EQGIAPDTFCYNSLIIGLSKAKKMDEARS 511
Query: 192 TLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYV 251
LL M GF D T + Y +AG A++ +E+ G +K ++ Y
Sbjct: 512 FLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYC 571
Query: 252 RAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDAR 311
+ G + R M Q + ++ Y L+ G NG A+ +F ++ GI PD
Sbjct: 572 KKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVF 631
Query: 312 MCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDL 371
LI+ + G QKA + F M +AGL + ++L + ++ +A E L ++
Sbjct: 632 SYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEM 691
Query: 372 ERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLR 409
GF CT+ + + G + E + E L+
Sbjct: 692 SGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLK 729
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 93/192 (48%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+++E+ + + YT +++G K ++ +AE M+ +G D + ++ +SK G
Sbjct: 585 SMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLG 644
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
N++ A F+E+ G + Y ++ + R+G +++ + LL EM + + Y
Sbjct: 645 NMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYC 704
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
++ GY +G+ A ++F+ ++ G+ PD+ + L++ ++A T F+ K
Sbjct: 705 TIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKG 764
Query: 340 GLEPSDKCVALI 351
S ALI
Sbjct: 765 CASSSAPFNALI 776
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 90/204 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I G K A + M GF D + + + SK G ++ A+ F+ +
Sbjct: 318 YSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMI 377
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G R+Y S++ + R + +G LL E+ + + + Y ++G +G+ +
Sbjct: 378 TFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLD 437
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
GA + + + +G P+ + LI + + A + MR+ G+ P C ++
Sbjct: 438 GAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLI 497
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
K +++ A FL+++ +GF
Sbjct: 498 IGLSKAKKMDEARSFLLEMVENGF 521
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 126/304 (41%), Gaps = 46/304 (15%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ +N+ Y ++ G+ + +I+ A+ L M +GF + VT ++ Y K+G+
Sbjct: 656 MVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGD 715
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG--------------------- 259
L A + F+E+KL G D Y ++V R ++R
Sbjct: 716 LAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSAPFNAL 775
Query: 260 --------------EVLLREMDAQEVYVGSE---VYKALLRGYSMNGNSEGAQRVFEAIQ 302
+++ R MD G Y ++ GN E A+ +F +Q
Sbjct: 776 INWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQ 835
Query: 303 FAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLN 362
A + P L+N Y G+ + ++ F + AG+EP + ++I++A KE
Sbjct: 836 KANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTT 895
Query: 363 RALEFLIDL-----ERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRETYSKIPG 417
+AL L + DG + L + F ++G +E E V+ E +R Y IP
Sbjct: 896 KALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVV-ENMVRLKY--IPD 952
Query: 418 SRSI 421
S ++
Sbjct: 953 SSTV 956
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 102/239 (42%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
L ++E F+ + Y I GY + + +A+ + M G I ++V T ++ Y K
Sbjct: 514 LEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKK 573
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
G + A F + G D ++Y ++ V+ G ++ E + EM + + Y
Sbjct: 574 GKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSY 633
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
L+ G+S GN + A +F+ + AG+T + + +L+ + +G+ +KA M
Sbjct: 634 GTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSG 693
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
G P+ I+ K L A + +++ G + TL RL VE
Sbjct: 694 KGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVE 752
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 95/233 (40%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y + G + A N + M G + V T ++ + + A +E++
Sbjct: 423 YGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMR 482
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D Y S+++ +A +D L EM + Y A + GY G
Sbjct: 483 EQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFA 542
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + + G+ P+ +C LIN Y G+ +A +AF++M + G+ K +++
Sbjct: 543 SADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLM 602
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ K ++N A E ++ G + TL F +LG +++ + E
Sbjct: 603 NGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDE 655
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 78/181 (43%), Gaps = 9/181 (4%)
Query: 161 LLEESFEA----NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS 216
L++ SF+ N Y +I K+ ++ A+ M++ + +T T ++ Y
Sbjct: 795 LMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYD 854
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY---- 272
K G F+E+ G D Y ++ A+++ GM + VLL +M A+
Sbjct: 855 KMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGC 914
Query: 273 -VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
+ +ALL G++ G E A++V E + PD+ LIN ++ + A
Sbjct: 915 KLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELINESCISSNQRMAAD 974
Query: 332 A 332
A
Sbjct: 975 A 975
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/248 (16%), Positives = 99/248 (39%), Gaps = 14/248 (5%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
++E + +++ Y +I + + +Q A++ LL + + +
Sbjct: 214 GMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEE--------------LGTATL 259
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
N+ A E + + G ++SY ++ + L+ + LL EM++ ++ + Y
Sbjct: 260 NVDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYS 319
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ G N++ A + + G + D M I G +KA F M
Sbjct: 320 ILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITF 379
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEV 399
G+ P + A ++ +E + + E L+++++ ++ T G ++
Sbjct: 380 GVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGA 439
Query: 400 EHVLREYG 407
++++E G
Sbjct: 440 YNIVKEMG 447
>gi|255574497|ref|XP_002528160.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532417|gb|EEF34211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 569
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 105/233 (45%), Gaps = 4/233 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y I G K Q A MKR T T+++ ++ KA MA + F E++
Sbjct: 221 YNAYIDGLMKAGNPQRAVEIFQRMKRDCCQPSTETYTLLINLHGKASQSYMALKLFNEMR 280
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM--DAQEVYVGSEVYKALLRGYSMNGN 290
+ +Y ++V A+ R G+ ++ E + ++ D E V + Y AL+ YS G
Sbjct: 281 SQKCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGHEPDVYA--YNALMEAYSRAGF 338
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
GA +F +Q G PD ++++AY G + A F+ M++ G+ P+ K L
Sbjct: 339 PYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRGGLHEDAQAVFEEMKRLGITPTMKSHML 398
Query: 351 ILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+LSA K + + + + +L G ++ + RLG ++E VL
Sbjct: 399 LLSAYSKAGDVAKCEDIVNELHESGLEPDTFVLNSMLNLYGRLGQFGKMEEVL 451
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 122/305 (40%), Gaps = 36/305 (11%)
Query: 137 DWLAVLKQLKLMEH-PLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLA 195
D + V+ QL+L + L L + + L SF++++ + +I YG+K + AE T
Sbjct: 114 DLINVVVQLRLNKKWDLILLICQWILYRSSFQSDVMIFNLVIDAYGRKSLYKMAETTYFE 173
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
+ I + T +++ Y +G L+ AE F E++ G P Y + + ++AG
Sbjct: 174 LIEARCIPTEDTYALLLKAYCTSGLLEKAEAIFAEMRKYGLPPSAIVYNAYIDGLMKAGN 233
Query: 256 LDRG-EV----------------------------------LLREMDAQEVYVGSEVYKA 280
R E+ L EM +Q+ Y A
Sbjct: 234 PQRAVEIFQRMKRDCCQPSTETYTLLINLHGKASQSYMALKLFNEMRSQKCKPNICTYTA 293
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ ++ G E A+ +FE +Q G PD L+ AY AG A F M+ G
Sbjct: 294 LVNAFAREGLCEKAEEIFEQLQEDGHEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMG 353
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
EP +++ A + A +++R G ++ L + + + G V + E
Sbjct: 354 CEPDRASYNIMVDAYGRGGLHEDAQAVFEEMKRLGITPTMKSHMLLLSAYSKAGDVAKCE 413
Query: 401 HVLRE 405
++ E
Sbjct: 414 DIVNE 418
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 87/208 (41%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E + Y ++ YG+ ++A+ MKR G + +++ YSKAG++ E+
Sbjct: 355 EPDRASYNIMVDAYGRGGLHEDAQAVFEEMKRLGITPTMKSHMLLLSAYSKAGDVAKCED 414
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
E+ G D SM+ Y R G + E +L M++ Y L+ Y
Sbjct: 415 IVNELHESGLEPDTFVLNSMLNLYGRLGQFGKMEEVLTAMESGPYATDISTYNILINIYG 474
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G E + +F+++ + PD + AY K F+ M AG P +
Sbjct: 475 RAGFFEKMEGLFQSLAAKNLKPDVVTWTSRLGAYSRKKLYTKCLEIFEEMIDAGCHPDGR 534
Query: 347 CVALILSACEKENQLNRALEFLIDLERD 374
++LS+C E+Q+ + + + ++
Sbjct: 535 TAKVLLSSCSSEDQIEQVTTVIRTMHKN 562
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 94/236 (39%), Gaps = 35/236 (14%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
NI YT +++ + ++ + AE ++ G D ++ YS+AG A E F
Sbjct: 287 NICTYTALVNAFAREGLCEKAEEIFEQLQEDGHEPDVYAYNALMEAYSRAGFPYGAAEIF 346
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G D+ SY MV AY R G+ + DAQ
Sbjct: 347 SLMQHMGCEPDRASYNIMVDAYGRGGLHE---------DAQA------------------ 379
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
VFE ++ GITP + LL++AY AG K + ++GLEP +
Sbjct: 380 --------VFEEMKRLGITPTMKSHMLLLSAYSKAGDVAKCEDIVNELHESGLEPDTFVL 431
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
+L+ + Q + E L +E + L + R G E++E + +
Sbjct: 432 NSMLNLYGRLGQFGKMEEVLTAMESGPYATDISTYNILINIYGRAGFFEKMEGLFQ 487
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 101/244 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E+ E ++ Y ++ Y + A M+ G D+ + +MV Y + G
Sbjct: 314 LQEDGHEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRGGL 373
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A+ FEE+K LG +S+ ++ AY +AG + + E ++ E+ + + V +
Sbjct: 374 HEDAQAVFEEMKRLGITPTMKSHMLLLSAYSKAGDVAKCEDIVNELHESGLEPDTFVLNS 433
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+L Y G + V A++ D +LIN Y AG +K FQ++
Sbjct: 434 MLNLYGRLGQFGKMEEVLTAMESGPYATDISTYNILINIYGRAGFFEKMEGLFQSLAAKN 493
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
L+P L A ++ + LE ++ G + L + +E+V
Sbjct: 494 LKPDVVTWTSRLGAYSRKKLYTKCLEIFEEMIDAGCHPDGRTAKVLLSSCSSEDQIEQVT 553
Query: 401 HVLR 404
V+R
Sbjct: 554 TVIR 557
>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 111/257 (43%), Gaps = 3/257 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
F + R Y+ +IHG K AMK +G + D ++ + K+G +
Sbjct: 328 HGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNK 387
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A + EE+K+ G P +YGS++ + LD +L E + + + VY +L+
Sbjct: 388 AYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLID 447
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G+ G + A + E + G+TP+ L++A A + +A FQ+M+ P
Sbjct: 448 GFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPP 507
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+ +++++ + + N+A F ++++ G T+ + + G + E +
Sbjct: 508 NQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLF 567
Query: 404 REYGLRETYSKIPGSRS 420
+ + IP S S
Sbjct: 568 SRF---KANGGIPDSAS 581
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/237 (19%), Positives = 100/237 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N ++ +I G GK ++ +A + M G + + T ++ + K G + + +
Sbjct: 228 NAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIY 287
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+ G D + + +AG ++G L RE++A + Y L+ G
Sbjct: 288 KEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKA 347
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + +F A++ G D +I+ + +G+ KAY + M+ G P+
Sbjct: 348 GLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTY 407
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ K ++L+ A + + +G + +L F ++G ++E ++ E
Sbjct: 408 GSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEE 464
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 101/238 (42%), Gaps = 2/238 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I ++ ++ A M+R G + +T+ +M+ KA L+ A F
Sbjct: 158 NVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIF 217
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM-DAQEVYVGSEVYKALLRGYSM 287
E + + ++ S++ + G +D L +M D V G+ VY +L+R +
Sbjct: 218 EGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHV-PGAIVYTSLIRSFFK 276
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G E ++++ + G +PD + ++ AG+++K F+ + G P +
Sbjct: 277 CGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARS 336
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++++ K N E ++ G ++ A + F + G V + +L E
Sbjct: 337 YSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEE 394
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 82/196 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y+ +I G+GK +I A + + ++G + T ++ KA + A F
Sbjct: 438 NVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICF 497
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ +K L P ++ +Y ++ R ++ V +EM + + Y ++ G +
Sbjct: 498 QSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKA 557
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
GN A +F + G PD+ +I A ++ AY F+ R G K
Sbjct: 558 GNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTC 617
Query: 349 ALILSACEKENQLNRA 364
++L A K L +A
Sbjct: 618 VVLLDALHKAECLEQA 633
Score = 41.2 bits (95), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 32/163 (19%), Positives = 67/163 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L+++ N+ + ++ K +I A +MK +Q+T ++++ +
Sbjct: 465 LMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRK 524
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A ++E++ LG + +Y +M+ +AG + L A S Y A
Sbjct: 525 FNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNA 584
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
++ G S + A +FE + G + C +L++A A
Sbjct: 585 MIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKA 627
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 67/171 (39%), Gaps = 1/171 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I GYG + A L K +G I + ++ K ++ A FEE+K
Sbjct: 93 YNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMK 152
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
P + +Y ++ R G L+ + +M+ ++ ++ E
Sbjct: 153 RDAVP-NVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLE 211
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
A +FE + TP+A + LI+ G+ AY+ ++ M G P
Sbjct: 212 EACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVP 262
>gi|255584056|ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 647
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 105/243 (43%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E E ++ Y +++G I++AE M+ D VT M+ Y + G +
Sbjct: 207 ENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYCEVGKTR 266
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A E + ++L DK +Y +++ A G D L EMD + + + VY ++
Sbjct: 267 KAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEKGLEIPPHVYSLVI 326
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G +G VFE + G + + LI++ G +A F+ M+K GLE
Sbjct: 327 GGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLE 386
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P + +I+++ K +L+ ALE++ G V +L + G V+E E +
Sbjct: 387 PDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERI 446
Query: 403 LRE 405
E
Sbjct: 447 FYE 449
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 98/227 (43%), Gaps = 6/227 (2%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E+ E Y+ +I G K + M +G + T ++ +K GN+
Sbjct: 312 EKGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMG 371
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A F+ +K G D+ +YG +V + ++G LD + + V V + Y +L+
Sbjct: 372 EAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYSSLI 431
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G +G + A+R+F + G PD+ LI+A G+ +A + M G +
Sbjct: 432 DGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDGCD 491
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAW 389
+ ++++ +E++ AL L DL M+ K + T AA+
Sbjct: 492 QTVYTYTILITGLFREHRNEEALT-LWDL-----MIDKGITPTAAAF 532
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 70/168 (41%)
Query: 211 MVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE 270
++ + + G L + F + K +G + S S++ ++ GM++ + R M
Sbjct: 150 LIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLIKSFGNLGMVEEVLWVWRRMKENG 209
Query: 271 VYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAY 330
+ Y L+ G + E A+RVFE ++ I PD +I Y G+++KA+
Sbjct: 210 IEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYCEVGKTRKAF 269
Query: 331 TAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMV 378
+ M + P ++ AC E + L +++ G +
Sbjct: 270 EKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEKGLEI 317
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 78/184 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + +AN+ YT +I K + A MK+ G D+VT V+V K+G
Sbjct: 345 MISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGR 404
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A E E G ++ Y S++ ++G +D E + EM + S Y A
Sbjct: 405 LDEALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNA 464
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ + G + A + + ++ G +LI ++++A T + M G
Sbjct: 465 LIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTILITGLFREHRNEEALTLWDLMIDKG 524
Query: 341 LEPS 344
+ P+
Sbjct: 525 ITPT 528
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 38/201 (18%), Positives = 76/201 (37%), Gaps = 6/201 (2%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
++ + N+ Y +I + + ++ K G I + ++ + GNL
Sbjct: 137 QKKYTHNLECYVSLIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLIKSF---GNLG 193
Query: 223 MAEET---FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
M EE + +K G SY +V V + ++ E + M+ ++ Y
Sbjct: 194 MVEEVLWVWRRMKENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYN 253
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
+++GY G + A +A++ + PD LI A G + M +
Sbjct: 254 TMIKGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEK 313
Query: 340 GLEPSDKCVALILSACEKENQ 360
GLE +L++ K+ +
Sbjct: 314 GLEIPPHVYSLVIGGLCKDGK 334
>gi|212274769|ref|NP_001130292.1| uncharacterized protein LOC100191386 [Zea mays]
gi|194688764|gb|ACF78466.1| unknown [Zea mays]
Length = 510
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 118/260 (45%), Gaps = 33/260 (12%)
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA 224
S + N+ Y +I YGK ++ + A + M+ G D +T + ++ ++ KAG L A
Sbjct: 226 SVKPNVVTYNTMITIYGKSLEDEKAGRLVQEMQAIGVQPDAITYSTILSIWVKAGKLDRA 285
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE-------------- 270
FE+++ G +D Y +MV+AY RAG+ + + LLR++ E
Sbjct: 286 ARLFEKLREAGTEIDPVLYQTMVVAYERAGLASQAKRLLRDLKDPEGIPKETAIKILASA 345
Query: 271 -------------VYVG----SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
V G S V++A++ Y+ N VF+ ++ G PD+ +
Sbjct: 346 GRLEEAAWLFRRAVNTGEIKDSSVHRAMMDLYAKNRRHRNVIEVFDEMRKLGQLPDSEII 405
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLI-DLE 372
A +NAY + KA +Q MR+AG SD+ ++S + +ALE L+ +L
Sbjct: 406 ATAMNAYGKLKEFDKAAALYQAMREAGCVFSDRVHFQMISLLGAQKDF-KALEVLVGELS 464
Query: 373 RDGFMVGKEASCTLAAWFKR 392
D + +E A ++R
Sbjct: 465 HDPSIDKRELYLVAAGVYER 484
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 82/174 (47%), Gaps = 2/174 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ ++ + + +A L M+ D + + ++ + + G+ A F ++
Sbjct: 13 YSTLLAALTRAGHLDHALTFLPLMEDDAVAPDLILFSNLIHLALRGGDAPKALALFSRLR 72
Query: 233 LLGEPLDKRSYGSMVMAYVRAGML-DRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
G D ++Y + V AY ++ +L D +LL +M A V +E Y +L + G
Sbjct: 73 AAGIRPDLKAYNAAVAAYCKSDLLRDAKRMLLHDMPADGVAPDAETYSPILAALARRGRH 132
Query: 292 EGAQRVFEAIQ-FAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A +F ++ A + PD + +++NAY +++A F +MR+AG+ PS
Sbjct: 133 LAAVSLFSHMRAVARVKPDISVFNIILNAYGQLDLAREADRLFWSMRRAGVPPS 186
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 108/255 (42%), Gaps = 26/255 (10%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRD 172
V+P+ S +LAA R R LA + M VA + + +I
Sbjct: 112 VAPDAETYSPILAALAR-----RGRHLAAVSLFSHMR-----AVARV-------KPDISV 154
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+ I++ YG+ + A+ +M+R G VT M+ +Y AG A F+ ++
Sbjct: 155 FNIILNAYGQLDLAREADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGLFGEAVHLFDLMR 214
Query: 233 LLGE---------PLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
+ + +Y +M+ Y ++ ++ L++EM A V + Y +L
Sbjct: 215 STSDGNGGAGSSVKPNVVTYNTMITIYGKSLEDEKAGRLVQEMQAIGVQPDAITYSTILS 274
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
+ G + A R+FE ++ AG D + ++ AY+ AG + +A ++++ P
Sbjct: 275 IWVKAGKLDRAARLFEKLREAGTEIDPVLYQTMVVAYERAGLASQAKRLLRDLKDPEGIP 334
Query: 344 SDKCVALILSACEKE 358
+ + ++ SA E
Sbjct: 335 KETAIKILASAGRLE 349
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 17/200 (8%)
Query: 208 LTVMVVMYSKAGNLKMAEET---FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEV--- 261
++V ++ + G L +A E F ++ G P +Y +M+ Y AG+ GE
Sbjct: 152 ISVFNIILNAYGQLDLAREADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGLF--GEAVHL 209
Query: 262 --LLREMDAQEVYVGSEV------YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
L+R GS V Y ++ Y + E A R+ + +Q G+ PDA
Sbjct: 210 FDLMRSTSDGNGGAGSSVKPNVVTYNTMITIYGKSLEDEKAGRLVQEMQAIGVQPDAITY 269
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
+ +++ + AG+ +A F+ +R+AG E ++ A E+ ++A L DL +
Sbjct: 270 STILSIWVKAGKLDRAARLFEKLREAGTEIDPVLYQTMVVAYERAGLASQAKRLLRDL-K 328
Query: 374 DGFMVGKEASCTLAAWFKRL 393
D + KE + + A RL
Sbjct: 329 DPEGIPKETAIKILASAGRL 348
>gi|449436409|ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 103/215 (47%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ + ++ Y ++ K Q+ A +L M + + + VT + M Y+KAG
Sbjct: 319 MIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGR 378
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ A + E+K LG LD+ SY +++ Y + G + + +EM + V Y A
Sbjct: 379 LEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNA 438
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL GY G RVF+ ++ + P+ + LI+ Y ++A F+ ++AG
Sbjct: 439 LLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAG 498
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
L+ + +++A K ++ A+ L ++ ++G
Sbjct: 499 LKADVVLYSELINALCKNGLVDSAVLLLDEMTKEG 533
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 4/202 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y+ + GY K ++++A N MK G D+V+ ++ +Y+K G + A +
Sbjct: 362 NVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVC 421
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+ G D +Y +++ Y + G + + +EM V+ Y L+ YS
Sbjct: 422 KEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKG 481
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A VF + AG+ D + + LINA G A M K G+ P+
Sbjct: 482 SLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTY 541
Query: 349 ALILSACEKENQLNRALEFLID 370
I+ A + EFL+D
Sbjct: 542 NSIIDAFGRST----TAEFLVD 559
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 99/239 (41%), Gaps = 1/239 (0%)
Query: 169 NIRDYTKIIHGYGKK-MQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
N+ Y +I GK ++ + M R G D++T ++ + S+ G + A
Sbjct: 256 NLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNL 315
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
F E+ G D +Y +++ A + G +D ++ EM +++ Y + GY+
Sbjct: 316 FNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAK 375
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G E A ++ ++F GI D L++ Y G+ + A + M +G++
Sbjct: 376 AGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVT 435
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREY 406
+L K+ + N ++++D TL + + + EE V RE+
Sbjct: 436 YNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREF 494
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 96/235 (40%), Gaps = 1/235 (0%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKL 233
+ +I G+ +++ A+ G+ + ++ Y K+G A + FE +K+
Sbjct: 191 SAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKV 250
Query: 234 LGEPLDKRSYGSMVMAYVRAGM-LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +Y +++ A + G+ R + EM V Y +LL S G E
Sbjct: 251 SGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWE 310
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ +F + GI D L++A GQ AY M + P+ + +
Sbjct: 311 AARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMA 370
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYG 407
K +L AL +++ G + + + TL + + +LG E+ V +E G
Sbjct: 371 DGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMG 425
>gi|449518511|ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 103/215 (47%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ + ++ Y ++ K Q+ A +L M + + + VT + M Y+KAG
Sbjct: 319 MIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGR 378
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ A + E+K LG LD+ SY +++ Y + G + + +EM + V Y A
Sbjct: 379 LEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNA 438
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL GY G RVF+ ++ + P+ + LI+ Y ++A F+ ++AG
Sbjct: 439 LLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAG 498
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
L+ + +++A K ++ A+ L ++ ++G
Sbjct: 499 LKADVVLYSELINALCKNGLVDSAVLLLDEMTKEG 533
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 4/202 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y+ + GY K ++++A N MK G D+V+ ++ +Y+K G + A +
Sbjct: 362 NVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVC 421
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+ G D +Y +++ Y + G + + +EM V+ Y L+ YS
Sbjct: 422 KEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKG 481
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A VF + AG+ D + + LINA G A M K G+ P+
Sbjct: 482 SLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTY 541
Query: 349 ALILSACEKENQLNRALEFLID 370
I+ A + EFL+D
Sbjct: 542 NSIIDAFGRST----TAEFLVD 559
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 99/239 (41%), Gaps = 1/239 (0%)
Query: 169 NIRDYTKIIHGYGKK-MQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
N+ Y +I GK ++ + M R G D++T ++ + S+ G + A
Sbjct: 256 NLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNL 315
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
F E+ G D +Y +++ A + G +D ++ EM +++ Y + GY+
Sbjct: 316 FNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAK 375
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G E A ++ ++F GI D L++ Y G+ + A + M +G++
Sbjct: 376 AGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVT 435
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREY 406
+L K+ + N ++++D TL + + + EE V RE+
Sbjct: 436 YNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREF 494
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 96/235 (40%), Gaps = 1/235 (0%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKL 233
+ +I G+ +++ A+ G+ + ++ Y K+G A + FE +K+
Sbjct: 191 SAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKV 250
Query: 234 LGEPLDKRSYGSMVMAYVRAGM-LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +Y +++ A + G+ R + EM V Y +LL S G E
Sbjct: 251 SGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWE 310
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ +F + GI D L++A GQ AY M + P+ + +
Sbjct: 311 AARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMA 370
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYG 407
K +L AL +++ G + + + TL + + +LG E+ V +E G
Sbjct: 371 DGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMG 425
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 116/256 (45%), Gaps = 8/256 (3%)
Query: 153 YLQVAEL----ALLEESFEANIR----DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICD 204
Y QV +L + E+ +IR Y +I+G K + AE+ ++ M++ G
Sbjct: 379 YCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPS 438
Query: 205 QVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLR 264
T ++ Y AG L+ +++ G D S+GS+V A+ + G + +L
Sbjct: 439 VETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILD 498
Query: 265 EMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAG 324
+M ++V ++VY +++ Y +G++E A + E ++ +G++ LL+ +
Sbjct: 499 DMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSS 558
Query: 325 QSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASC 384
Q +A +R GL P I+SAC + ++ALE L ++ + G
Sbjct: 559 QIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCH 618
Query: 385 TLAAWFKRLGVVEEVE 400
TL + G V ++E
Sbjct: 619 TLVSALASAGRVHDME 634
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 100/226 (44%)
Query: 129 RFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQN 188
R ++P + A++ L +E + + + + + ++ + +I YG Q++
Sbjct: 398 RHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEK 457
Query: 189 AENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVM 248
L M+++G D ++ +V + K G + A +++ + + Y S++
Sbjct: 458 CFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIID 517
Query: 249 AYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITP 308
AY+ +G ++ +L+ +M V Y LL+G + + A+ + ++ G+ P
Sbjct: 518 AYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRP 577
Query: 309 DARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSA 354
D +I+A G + KA Q M K G+ P+ + ++SA
Sbjct: 578 DVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSA 623
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 111/242 (45%), Gaps = 3/242 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+GY + ++ A MK R D +T ++ K + AE+ E++
Sbjct: 372 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 431
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G ++ +++ AY AG L++ +L +M + + + ++++ + NG
Sbjct: 432 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 491
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + + + + P+A++ +I+AY +G +++A + M+ +G+ S L+L
Sbjct: 492 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLL 551
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE---YGLR 409
+ +Q++ A E + L G + T+ + G ++ +L+E YG+R
Sbjct: 552 KGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIR 611
Query: 410 ET 411
T
Sbjct: 612 PT 613
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/217 (18%), Positives = 92/217 (42%), Gaps = 5/217 (2%)
Query: 155 QVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
++A ++L + F Y+ + G + + Q + ++G + T ++++
Sbjct: 289 EMASHSMLPDGFT-----YSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNG 343
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
K G + A++ FE + G Y +++ Y + L + +M ++ +
Sbjct: 344 LCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPD 403
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
Y AL+ G A+ + ++ +G+ P LI+AY AGQ +K +T
Sbjct: 404 HITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLS 463
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDL 371
+M++ G++ ++ A K ++ A+ L D+
Sbjct: 464 DMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDM 500
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 70/172 (40%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G + + +A M G +++T M+ + K G+L+ +++
Sbjct: 197 YNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQML 256
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +Y ++ R G +D L+ EM + + Y L G + G S+
Sbjct: 257 HDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQ 316
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
+F G+ A C++L+N G+ KA F+ + GL P+
Sbjct: 317 TMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPT 368
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 72/196 (36%), Gaps = 38/196 (19%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N + Y II Y + + A + MK G VT +++ ++ + AEE
Sbjct: 508 NAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELI 567
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ G D SY +++ A G D+ LL+EM+
Sbjct: 568 YTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKY------------------- 608
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
GI P R C L++A AG+ +Q M +EPS
Sbjct: 609 ----------------GIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIY 652
Query: 349 ALILSA---CEKENQL 361
+++ A CE ++++
Sbjct: 653 GIMVDAYVRCENDSKV 668
>gi|125600636|gb|EAZ40212.1| hypothetical protein OsJ_24656 [Oryza sativa Japonica Group]
Length = 661
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 9/214 (4%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQV-TLTVMVVMYSKAGNLKMAEETFEEIK 232
T +I G ++ AE L G I + ++ Y K G+LK AE+ +E+
Sbjct: 260 TALISSLGSARRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMS 319
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D+ +Y +V AY RAG + +LL+EM+A V S V+ +L G+ G +
Sbjct: 320 QCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQ 379
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A V + +G+ PD ++I+ + A AF MR+ G+EP ++
Sbjct: 380 KAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLI 439
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
A K + +RA+E ++ +E++C L
Sbjct: 440 DAHCKGGRHDRAIELFDEM--------RESNCPL 465
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 104/248 (41%), Gaps = 7/248 (2%)
Query: 159 LALLEESFEANIRD----YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
A+L E + +R Y +I +GK + +A + M+ G D VT ++
Sbjct: 382 FAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDA 441
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
+ K G A E F+E++ PL +Y M+ + E +L EM Q +
Sbjct: 442 HCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPN 501
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
Y L+ Y +G + A EA++ G+ P M L+NAY G + A +
Sbjct: 502 IITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVK 561
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
MR GLE S + +++A ++ ++ A L ++ +G + T K L
Sbjct: 562 AMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGL---RPDVITYTTLMKALI 618
Query: 395 VVEEVEHV 402
VE+ E V
Sbjct: 619 RVEQFEKV 626
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 99/233 (42%), Gaps = 10/233 (4%)
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
R Y ++ GY K ++NAE L M + G D+ T +++V Y++AG + A +E
Sbjct: 293 RAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKE 352
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGE-----VLLREMDAQEVYVGSEVYKALLRGY 285
++ D S V + + AG DRGE +LREM A V Y ++ +
Sbjct: 353 MEA-----DGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTF 407
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
A F+ ++ GI PD LI+A+ G+ +A F MR++
Sbjct: 408 GKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGT 467
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
++++ +E + L +++ G + TL + R G +E
Sbjct: 468 TTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKE 520
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 107/249 (42%), Gaps = 6/249 (2%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+++I+ G+ + + Q A L M G D+ VM+ + K L A + F+ ++
Sbjct: 365 FSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMR 424
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D ++ +++ A+ + G DR L EM +G+ Y ++ E
Sbjct: 425 EEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWE 484
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
G + + ++ G+ P+ L++ Y +G+ ++A + M+ GL+PS ++
Sbjct: 485 GVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALV 544
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWF---KRLGVVEEVEHVLREYGLR 409
+A + + AL + + DG +L F +R+ V ++E GLR
Sbjct: 545 NAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLR 604
Query: 410 E---TYSKI 415
TY+ +
Sbjct: 605 PDVITYTTL 613
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 66/171 (38%), Gaps = 2/171 (1%)
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
EP D + ++ A+ RA + D LL A + S AL+ A+
Sbjct: 218 EP-DAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAE 276
Query: 296 RVFEAIQFAG-ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSA 354
+F AG I P R L+ Y G + A M + G+ P + +L++ A
Sbjct: 277 ALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDA 336
Query: 355 CEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ + A L ++E DG + A F+ G ++ VLRE
Sbjct: 337 YTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLRE 387
>gi|440800754|gb|ELR21789.1| pentatricopeptide repeat domain/PPR repeatcontaining protein
[Acanthamoeba castellanii str. Neff]
Length = 559
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 115/253 (45%), Gaps = 11/253 (4%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR-GFICDQVTLTVMVVMYSKAGNLK 222
+ E N Y ++H YG++ + E + M+ G D T + +V +S+AG +
Sbjct: 200 DGVEPNRTTYNAMVHSYGQQQMMDKMEALVERMRADPGLGLDNFTHSAVVAAWSRAGRVD 259
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE---VYVGSEVYK 279
A E F+ I G ++ +++ AG R + +LR +D + V + VY
Sbjct: 260 KALEAFDSIAATGGQPSLHAWTAILHMLGTAG---RSDEMLRTLDKMKRLGVKPSTAVYN 316
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
++ + N F+A++ G+ D + LI+ + G++ +A + M++
Sbjct: 317 TIINAFGKARNIHSMMDTFKAMRRDGVAADVKTYNTLIDTWAKTGKAVEAEKFYVLMKRE 376
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEV 399
GL+P+ +A ++ A + +Q + L + ++++G L + R+G EE
Sbjct: 377 GLQPTMYTIASLMDAYTRADQFEKVLRLISRMKKEGRAPDNVVFNLLIDTYGRMGKPEEA 436
Query: 400 EHVL----REYGL 408
E VL +EYG+
Sbjct: 437 EKVLCGAMKEYGI 449
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/283 (19%), Positives = 113/283 (39%), Gaps = 44/283 (15%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
++ GYG+ Q M+ G T T+++ + KAG+L+ + +E+++ G
Sbjct: 104 LLQGYGRAGDRQRLAQVQRDMREVGVRPGMSTYTILIDAWGKAGDLRRMWQAWEDMREQG 163
Query: 236 ---------------------------------------EPLDKRSYGSMVMAYVRAGML 256
EP ++ +Y +MV +Y + M+
Sbjct: 164 LRPNVVVYTSVIATLGKLGDVAAMERTFAEMQRSSGDGVEP-NRTTYNAMVHSYGQQQMM 222
Query: 257 DRGEVLLREMDAQE-VYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
D+ E L+ M A + + + + A++ +S G + A F++I G P
Sbjct: 223 DKMEALVERMRADPGLGLDNFTHSAVVAAWSRAGRVDKALEAFDSIAATGGQPSLHAWTA 282
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+++ AG+S + M++ G++PS I++A K ++ ++ + RDG
Sbjct: 283 ILHMLGTAGRSDEMLRTLDKMKRLGVKPSTAVYNTIINAFGKARNIHSMMDTFKAMRRDG 342
Query: 376 FMVGKEASCTLAAWFKRLGVVEEVEH---VLREYGLRETYSKI 415
+ TL + + G E E +++ GL+ T I
Sbjct: 343 VAADVKTYNTLIDTWAKTGKAVEAEKFYVLMKREGLQPTMYTI 385
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 39/68 (57%)
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
V+ LL+GY G+ + +V ++ G+ P +LI+A+ AG ++ + A+++M
Sbjct: 100 VFDVLLQGYGRAGDRQRLAQVQRDMREVGVRPGMSTYTILIDAWGKAGDLRRMWQAWEDM 159
Query: 337 RKAGLEPS 344
R+ GL P+
Sbjct: 160 REQGLRPN 167
>gi|357122970|ref|XP_003563186.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Brachypodium distachyon]
Length = 675
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 1/196 (0%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQV-TLTVMVVMYSKAGNLKMAEETFEEIK 232
T +I G ++ AE L G I + ++ Y K G+LK AE+ +E+
Sbjct: 274 TALISALGGAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMS 333
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D+ +Y +V AY RAG + +LL+EM+A V S V+ +L G+ G+ +
Sbjct: 334 DCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQ 393
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A V + +G+ PD ++I+ + A AF MR+ G+EP ++
Sbjct: 394 KAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDAFNRMREEGIEPDVVTWNTLI 453
Query: 353 SACEKENQLNRALEFL 368
A K + +RA+E
Sbjct: 454 DAHRKGGRHDRAMELF 469
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 129/309 (41%), Gaps = 28/309 (9%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRA-DWLAVLKQLKLMEHPLYL-----------QVAEL- 159
+ P+ SDL++A+ R P A D LA + + L + +VAE
Sbjct: 231 LEPDAPLFSDLISAFARAALPDAALDLLASAQAIGLTPRSNAVTALISALGGAGRVAEAE 290
Query: 160 ALLEESFEAN-----IRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
AL E F A R Y ++ GY K ++NAE L M G D+ T +++V
Sbjct: 291 ALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSDCGVAPDEATYSLLVDA 350
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGE-----VLLREMDAQ 269
Y++AG + A +E++ D S V + + AG DRG+ +LREM A
Sbjct: 351 YTRAGRWESARILLKEMEA-----DGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHAS 405
Query: 270 EVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
V Y ++ + A F ++ GI PD LI+A++ G+ +A
Sbjct: 406 GVQPDRHFYNVMIDTFGKYNCLGHAMDAFNRMREEGIEPDVVTWNTLIDAHRKGGRHDRA 465
Query: 330 YTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAW 389
F+ MR++ P ++++ ++ + L +++ G + TL
Sbjct: 466 MELFEEMRESNCPPGTTTYNIMINLLGEQERWVGVETMLSEMKEQGLVPNIITYTTLVDV 525
Query: 390 FKRLGVVEE 398
+ R G +E
Sbjct: 526 YGRSGRFKE 534
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 81/196 (41%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I +GK + +A + M+ G D VT ++ + K G A E FEE++
Sbjct: 414 YNVMIDTFGKYNCLGHAMDAFNRMREEGIEPDVVTWNTLIDAHRKGGRHDRAMELFEEMR 473
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
P +Y M+ E +L EM Q + Y L+ Y +G +
Sbjct: 474 ESNCPPGTTTYNIMINLLGEQERWVGVETMLSEMKEQGLVPNIITYTTLVDVYGRSGRFK 533
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A E ++ G+ P M L+NAY G + A + MR GLE S + ++
Sbjct: 534 EAIECIEVMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLM 593
Query: 353 SACEKENQLNRALEFL 368
+A ++ ++ A L
Sbjct: 594 NAFGEDRRVVEAFSVL 609
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 86/204 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+++I+ G+ + Q A L M G D+ VM+ + K L A + F ++
Sbjct: 379 FSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDAFNRMR 438
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D ++ +++ A+ + G DR L EM G+ Y ++
Sbjct: 439 EEGIEPDVVTWNTLIDAHRKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWV 498
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
G + + ++ G+ P+ L++ Y +G+ ++A + M+ GL+PS ++
Sbjct: 499 GVETMLSEMKEQGLVPNIITYTTLVDVYGRSGRFKEAIECIEVMKADGLKPSPTMYHALV 558
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
+A + + AL + + DG
Sbjct: 559 NAYAQRGLADHALNVVKAMRADGL 582
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 66/171 (38%), Gaps = 2/171 (1%)
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
EP D + ++ A+ RA + D LL A + S AL+ G A+
Sbjct: 232 EP-DAPLFSDLISAFARAALPDAALDLLASAQAIGLTPRSNAVTALISALGGAGRVAEAE 290
Query: 296 RVFEAIQFAG-ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSA 354
+F AG I P R L+ Y G + A M G+ P + +L++ A
Sbjct: 291 ALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSDCGVAPDEATYSLLVDA 350
Query: 355 CEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ + A L ++E DG + A F+ G ++ VLRE
Sbjct: 351 YTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLRE 401
>gi|115472657|ref|NP_001059927.1| Os07g0548300 [Oryza sativa Japonica Group]
gi|28564790|dbj|BAC57720.1| putative crp1 protein [Oryza sativa Japonica Group]
gi|113611463|dbj|BAF21841.1| Os07g0548300 [Oryza sativa Japonica Group]
Length = 661
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 9/214 (4%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQV-TLTVMVVMYSKAGNLKMAEETFEEIK 232
T +I G ++ AE L G I + ++ Y K G+LK AE+ +E+
Sbjct: 260 TALISSLGSARRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMS 319
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D+ +Y +V AY RAG + +LL+EM+A V S V+ +L G+ G +
Sbjct: 320 QCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQ 379
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A V + +G+ PD ++I+ + A AF MR+ G+EP ++
Sbjct: 380 KAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLI 439
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
A K + +RA+E ++ +E++C L
Sbjct: 440 DAHCKGGRHDRAIELFDEM--------RESNCPL 465
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 104/248 (41%), Gaps = 7/248 (2%)
Query: 159 LALLEESFEANIRD----YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
A+L E + +R Y +I +GK + +A + M+ G D VT ++
Sbjct: 382 FAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDA 441
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
+ K G A E F+E++ PL +Y M+ + E +L EM Q +
Sbjct: 442 HCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPN 501
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
Y L+ Y +G + A EA++ G+ P M L+NAY G + A +
Sbjct: 502 IITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVK 561
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
MR GLE S + +++A ++ ++ A L ++ +G + T K L
Sbjct: 562 AMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGL---RPDVITYTTLMKALI 618
Query: 395 VVEEVEHV 402
VE+ E V
Sbjct: 619 RVEQFEKV 626
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 99/233 (42%), Gaps = 10/233 (4%)
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
R Y ++ GY K ++NAE L M + G D+ T +++V Y++AG + A +E
Sbjct: 293 RAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKE 352
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGE-----VLLREMDAQEVYVGSEVYKALLRGY 285
++ D S V + + AG DRGE +LREM A V Y ++ +
Sbjct: 353 MEA-----DGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTF 407
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
A F+ ++ GI PD LI+A+ G+ +A F MR++
Sbjct: 408 GKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGT 467
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
++++ +E + L +++ G + TL + R G +E
Sbjct: 468 TTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKE 520
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 107/249 (42%), Gaps = 6/249 (2%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+++I+ G+ + + Q A L M G D+ VM+ + K L A + F+ ++
Sbjct: 365 FSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMR 424
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D ++ +++ A+ + G DR L EM +G+ Y ++ E
Sbjct: 425 EEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWE 484
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
G + + ++ G+ P+ L++ Y +G+ ++A + M+ GL+PS ++
Sbjct: 485 GVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALV 544
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWF---KRLGVVEEVEHVLREYGLR 409
+A + + AL + + DG +L F +R+ V ++E GLR
Sbjct: 545 NAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLR 604
Query: 410 E---TYSKI 415
TY+ +
Sbjct: 605 PDVITYTTL 613
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 66/171 (38%), Gaps = 2/171 (1%)
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
EP D + ++ A+ RA + D LL A + S AL+ A+
Sbjct: 218 EP-DAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAE 276
Query: 296 RVFEAIQFAG-ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSA 354
+F AG I P R L+ Y G + A M + G+ P + +L++ A
Sbjct: 277 ALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDA 336
Query: 355 CEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ + A L ++E DG + A F+ G ++ VLRE
Sbjct: 337 YTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLRE 387
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 100/217 (46%), Gaps = 6/217 (2%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ E N+ + II+G + +++ L+ M R+G++ D+VT +V Y K GN
Sbjct: 47 KGLEPNLITFNMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQ 106
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A E+ G + +Y S++ + +AG L+R +M + + Y ++
Sbjct: 107 ALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIIN 166
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G++ G + A RV + +G P LIN + + G+ ++A Q+M G+ P
Sbjct: 167 GFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLP 226
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGK 380
+ I+S + +L+RA + ++ M+GK
Sbjct: 227 DVVSYSTIISGFARNQELDRAFQMKVE------MIGK 257
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 101/240 (42%), Gaps = 35/240 (14%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +++GY K+ A M R G + VT T ++ KAGNL A E F+++
Sbjct: 91 YNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMH 150
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ G ++R+Y +++ + + G+LD +L EM Y AL+ G+ + G E
Sbjct: 151 VRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRME 210
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAY--------------QMAGQS------------ 326
A + + + G+ PD + +I+ + +M G+S
Sbjct: 211 EAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLI 270
Query: 327 ---------QKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
+A FQ M L P + +++A KE LN+AL ++ + GF+
Sbjct: 271 QGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFL 330
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 92/224 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I GY K + A L +M +G + +T +++ + G LK E
Sbjct: 17 NVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEVL 76
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E+ G D+ +Y ++V Y + G + VL EM + Y +L+
Sbjct: 77 VEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKA 136
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
GN A F+ + G+ P+ R +IN + G +AY M ++G PS
Sbjct: 137 GNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTY 196
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKR 392
+++ ++ A+ L D+ G + + T+ + F R
Sbjct: 197 NALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFAR 240
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 10/215 (4%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG----EPLDKRSYGSMVMAYV 251
M+R G + + VT M+ Y K LK +E F ++ +G EP + ++ ++
Sbjct: 9 MERNGCLPNVVTYNTMIDGYCK---LKRTDEAFGFLRSMGLKGLEP-NLITFNMIINGLC 64
Query: 252 RAGMLDRGEVLLREMDAQEVYVGSEV-YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDA 310
R G L +L EM +++ YV EV Y L+ GY GN A + + G++P+
Sbjct: 65 RDGRLKETSEVLVEM-SRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNV 123
Query: 311 RMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLID 370
LIN+ AG +A F M GL P+++ I++ ++ L+ A L +
Sbjct: 124 VTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNE 183
Query: 371 LERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ R GF+ L LG +EE +L++
Sbjct: 184 MTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQD 218
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 87/206 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N R YT II+G+ ++ + A L M R GFI VT ++ + G ++ A
Sbjct: 157 NERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLL 216
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+++ G D SY +++ + R LDR + EM + V + Y +L++G
Sbjct: 217 QDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQ 276
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
A +F+ + + PD LINAY G KA M + G P
Sbjct: 277 RRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTY 336
Query: 349 ALILSACEKENQLNRALEFLIDLERD 374
++++ K+ + A L+ L D
Sbjct: 337 NVLINGLNKQARSKEARRLLLKLFYD 362
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 72/178 (40%)
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
F+E++ G + +Y +M+ Y + D LR M + + + ++ G
Sbjct: 6 FKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCR 65
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
+G + V + G PD L+N Y G +A M + GL P+
Sbjct: 66 DGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVT 125
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++++ K LNRA+EF + G + T+ F + G+++E VL E
Sbjct: 126 YTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNE 183
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 55/287 (19%), Positives = 115/287 (40%), Gaps = 50/287 (17%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y+ II G+ + ++ A + M + + D VT + ++ + L A + F
Sbjct: 227 DVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMF 286
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAG-----------MLDRG--------EVLLREMDAQ 269
+E+ + P D+ +Y +++ AY + G M+ +G VL+ ++ Q
Sbjct: 287 QEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQ 346
Query: 270 -----------EVYVGSEV-----------------YK---ALLRGYSMNGNSEGAQRVF 298
+++ + +K AL++G+ M G + A +VF
Sbjct: 347 ARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVF 406
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
E++ P+ + ++I+ + G KAY ++ M P V ++ A E
Sbjct: 407 ESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTE 466
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
E + D+ R + E S L ++ G ++ V ++L E
Sbjct: 467 GMDGELNEVIGDILRSCKLTDAELSKVLVEINQKEGNMDMVFNLLTE 513
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 101/237 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y ++G KK +A+ M RG + D T T ++ Y K GN+ A F
Sbjct: 466 DVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLF 525
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E + DK +Y +++ + +AG + R + L +M +++ Y +L G+ +
Sbjct: 526 EAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSS 585
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G A + + + GI P+ C LI Y +G KAY M G+ P
Sbjct: 586 GLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSY 645
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ KE L +A + ++E+ G + F G ++E E VLR+
Sbjct: 646 NTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRK 702
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 80/174 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +++G+ + A N M +G + VT ++ Y ++G++ A E ++
Sbjct: 575 YGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMI 634
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D SY +++ Y++ L++ +L+ EM+ + + Y +L G+ G +
Sbjct: 635 SNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQ 694
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
A++V + GI PD + LIN + ++A+ M + GL P D+
Sbjct: 695 EAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPDDR 748
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 95/240 (39%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
+ +L+ N Y ++ ++ I A+ M RRG + D V+ + ++ + ++
Sbjct: 351 IEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARN 410
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
G+L A F E++ G D Y ++ + R G L + EM A+ ++ Y
Sbjct: 411 GHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTY 470
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
L G A +F + G+ PD LI Y G KA F+ M +
Sbjct: 471 NTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVR 530
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
L+P ++ K ++ RA E D+ R + + T+ F G++ E
Sbjct: 531 TNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPE 590
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 76/172 (44%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M+R G + D V T+++ + + G L A + +E+ G +D +Y + + + M
Sbjct: 423 MERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKM 482
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
++L EM + + + L+RGY +GN + A +FEA+ + PD
Sbjct: 483 FADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNT 542
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
LI+ + AG+ +A + +M + + P +L+ L AL
Sbjct: 543 LIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNL 594
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 82/200 (41%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E N+ +++ K + +N L M+ +G D VT ++ Y + G ++ A +
Sbjct: 254 ELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQ 313
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
G +Y +++ + G DR + +L EM + + Y LL
Sbjct: 314 LLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEIC 373
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
N AQ +F+ + G+ PD + LI G +A F+ M ++G+ P +
Sbjct: 374 RRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNV 433
Query: 347 CVALILSACEKENQLNRALE 366
+++ + L+ AL+
Sbjct: 434 IYTILIDGFCRNGALSDALK 453
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/242 (19%), Positives = 93/242 (38%), Gaps = 35/242 (14%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E + +T +I GY K + A N AM R D+VT ++ + KAG
Sbjct: 493 MVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGE 552
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGS----------------------------------- 245
+ A+E ++++ D SYG+
Sbjct: 553 MGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNT 612
Query: 246 MVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAG 305
++ Y R+G + + L +M + + S Y L+ GY N E A + ++ G
Sbjct: 613 LIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRG 672
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
+ + L++N + G+ Q+A + M + G+ P + +++ ++ + A
Sbjct: 673 LQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAF 732
Query: 366 EF 367
F
Sbjct: 733 RF 734
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 63/152 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+LE+ N+ +I GY + + A L M G I D + ++ Y K N
Sbjct: 598 MLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEAN 657
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ A E++ G + +Y ++ + G + E +LR+M + Y +
Sbjct: 658 LEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSS 717
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARM 312
L+ G+ N + A R + + G+ PD R
Sbjct: 718 LINGHVSQDNMKEAFRFHDEMLQRGLVPDDRF 749
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 83/215 (38%), Gaps = 30/215 (13%)
Query: 210 VMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQ 269
++V Y +A L+ E F+ ++ G + + ++ VR G +D
Sbjct: 192 LLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVD------------ 239
Query: 270 EVYVGSEVYKALLRG------YSMN--GNSEGAQRVFEAIQF-------AGITPDARMCA 314
+ E+Y ++RG Y++N N+ R FE + F G+ D
Sbjct: 240 ---LAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYN 296
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
LINAY G ++A+ + G+EP IL K + +RA + LI++ +
Sbjct: 297 TLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQL 356
Query: 375 GFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLR 409
G TL R + E + + E R
Sbjct: 357 GLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRR 391
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 58/140 (41%), Gaps = 2/140 (1%)
Query: 272 YVGSE--VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
Y GS +Y L+R Y F+ ++ G++ C L+ G A
Sbjct: 182 YFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLA 241
Query: 330 YTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAW 389
+ + + + G+E + + ++++A K+ + + FL D+E G TL
Sbjct: 242 WEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINA 301
Query: 390 FKRLGVVEEVEHVLREYGLR 409
+ R G+VEE +L + R
Sbjct: 302 YCREGLVEEAFQLLNSFSSR 321
>gi|255661196|gb|ACU25767.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 426
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 104/218 (47%), Gaps = 4/218 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 213 KDIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDR 272
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A FE+++ G +D+ Y +M++AY RAG++ + LL E+ + + + +L
Sbjct: 273 AAMLFEKLRSSGIEIDQVLYQTMIVAYERAGLVSHAKRLLHELKTPD-NIPRDTAIQILA 331
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G +G E A VF AG D + +I+ + + F MR G P
Sbjct: 332 G---SGRMEEATWVFRQAIDAGEVKDITVFEQMIDLFSKYRKYSNVVEVFDKMRGLGYFP 388
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKE 381
+AL+L+A K + +A + ++++ +G + E
Sbjct: 389 DSNVIALVLNAYGKLHDFEKANDVYLEMQDEGCVFSDE 426
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 104/251 (41%), Gaps = 3/251 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+ +GK + A + + M+ G + D V+ T ++ MY + A F E++
Sbjct: 82 YNSMINVFGKAKLFREARSLICEMRTXGVMPDTVSYTTLLTMYVENKKFIEALSVFAEMR 141
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ LD + M+ Y + GM + L M V Y LLR YS
Sbjct: 142 EIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGVEPNVVSYNTLLRVYSDAELFG 201
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +F +Q I + ++ Y + +KA Q M+ G+EP+ + I+
Sbjct: 202 EAXHLFRLMQRKDIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNAITYSTII 261
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRETY 412
S K +L+RA L G + + T+ ++R G+V + +L E +T
Sbjct: 262 SIWGKVGKLDRAAMLFEKLRSSGIEIDQVLYQTMIVAYERAGLVSHAKRLLHEL---KTP 318
Query: 413 SKIPGSRSIAL 423
IP +I +
Sbjct: 319 DNIPRDTAIQI 329
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 73/172 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ +A + L M+ D + ++ + K + A F +K
Sbjct: 12 YSTLITHFGKEGLFDDALSWLQKMEHDRVRGDLXLYSNLIELSRKLCDYSKAISIFSRLK 71
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D Y SM+ + +A + L+ EM V + Y LL Y N
Sbjct: 72 RSGITPDLVVYNSMINVFGKAKLFREARSLICEMRTXGVMPDTVSYTTLLTMYVENKKFI 131
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF ++ D C ++I+ Y G +++A F +MRK G+EP+
Sbjct: 132 EALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGVEPN 183
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/165 (18%), Positives = 70/165 (42%)
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
DK +Y +++ + + G+ D L++M+ V +Y L+ + A +F
Sbjct: 8 DKYTYSTLITHFGKEGLFDDALSWLQKMEHDRVRGDLXLYSNLIELSRKLCDYSKAISIF 67
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
++ +GITPD + +IN + A ++A + MR G+ P +L+ +
Sbjct: 68 SRLKRSGITPDLVVYNSMINVFGKAKLFREARSLICEMRTXGVMPDTVSYTTLLTMYVEN 127
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+ AL ++ ++ + + +LG+ +E + +
Sbjct: 128 KKFIEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 172
>gi|326516644|dbj|BAJ92477.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518576|dbj|BAJ88317.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 867
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 80/170 (47%), Gaps = 4/170 (2%)
Query: 198 RRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLD 257
R G D T T +V MY+K G L +A+ F+ + E + ++ S+V + AG D
Sbjct: 349 RHGLSPDAYTGTALVDMYAKCGRLDIAQRVFDGL----EHRNLATWNSLVAGHANAGHFD 404
Query: 258 RGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
R L+ M + + L+ GY+MNG S A + I+ AG+ P+ LI
Sbjct: 405 RALELVEAMKRHRIDPNVTTWNGLITGYAMNGLSSQAMLLLRQIKSAGVAPNVVSWTSLI 464
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
+ G Q ++T F M++ G++PS + ++L AC L + E
Sbjct: 465 SGSCNGGDYQDSFTFFSEMQQDGIQPSLVTMLVLLRACAGLALLTKGKEL 514
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 100/245 (40%), Gaps = 15/245 (6%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
A+ + N+ + +I GY A L +K G + V+ T ++ G
Sbjct: 412 AMKRHRIDPNVTTWNGLITGYAMNGLSSQAMLLLRQIKSAGVAPNVVSWTSLISGSCNGG 471
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGE-----VLLREMDAQEVYVG 274
+ + + F E++ G + ++ A +L +G+ L R D + V
Sbjct: 472 DYQDSFTFFSEMQQDGIQPSLVTMLVLLRACAGLALLTKGKELHCFALRRAYDGEVV--- 528
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
V AL+ Y+ G+ A+RVF +Q + C ++ + GQ+ +A F
Sbjct: 529 --VSTALIDMYAKAGSLTSAKRVFGRVQGKNLV----CCNAMLTGLAVHGQAHEAAALFH 582
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLE-RDGFMVGKEASCTLAAWFKRL 393
+M ++GL+P +L+AC + A E+L D+E + G E + R
Sbjct: 583 DMWRSGLKPDGITFTALLTACRSMGLVTEAWEYLDDMEAKYGVAPTAEHHACMVDLLARR 642
Query: 394 GVVEE 398
G ++E
Sbjct: 643 GYLDE 647
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 107/249 (42%), Gaps = 19/249 (7%)
Query: 138 WLAVLK---QLKLMEHPLYL--QVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENT 192
W AV+ +L L++ L L ++A A E+ E + + ++ G + + + A
Sbjct: 249 WNAVIACCVRLGLVDDALELAERMARDAETSEAAEPTLATWNTVLSGCARHGRDREALAV 308
Query: 193 LLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVR 252
+ M +G + D T++ ++ + +G+L E G D + ++V Y +
Sbjct: 309 VRRMLEQGILPDAATVSSLLKSVANSGSLGHGTEVHCFFLRHGLSPDAYTGTALVDMYAK 368
Query: 253 AGMLDRGEVLLREMDAQEVYVGSE-----VYKALLRGYSMNGNSEGAQRVFEAIQFAGIT 307
G LD AQ V+ G E + +L+ G++ G+ + A + EA++ I
Sbjct: 369 CGRLDI---------AQRVFDGLEHRNLATWNSLVAGHANAGHFDRALELVEAMKRHRID 419
Query: 308 PDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
P+ LI Y M G S +A + ++ AG+ P+ ++S + F
Sbjct: 420 PNVTTWNGLITGYAMNGLSSQAMLLLRQIKSAGVAPNVVSWTSLISGSCNGGDYQDSFTF 479
Query: 368 LIDLERDGF 376
++++DG
Sbjct: 480 FSEMQQDGI 488
>gi|326509061|dbj|BAJ86923.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 866
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 80/170 (47%), Gaps = 4/170 (2%)
Query: 198 RRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLD 257
R G D T T +V MY+K G L +A+ F+ + E + ++ S+V + AG D
Sbjct: 348 RHGLSPDAYTGTALVDMYAKCGRLDIAQRVFDGL----EHRNLATWNSLVAGHANAGHFD 403
Query: 258 RGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
R L+ M + + L+ GY+MNG S A + I+ AG+ P+ LI
Sbjct: 404 RALELVEAMKRHRIDPNVTTWNGLITGYAMNGLSSQAMLLLRQIKSAGVAPNVVSWTSLI 463
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
+ G Q ++T F M++ G++PS + ++L AC L + E
Sbjct: 464 SGSCNGGDYQDSFTFFSEMQQDGIQPSLVTMLVLLRACAGLALLTKGKEL 513
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 100/245 (40%), Gaps = 15/245 (6%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
A+ + N+ + +I GY A L +K G + V+ T ++ G
Sbjct: 411 AMKRHRIDPNVTTWNGLITGYAMNGLSSQAMLLLRQIKSAGVAPNVVSWTSLISGSCNGG 470
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGE-----VLLREMDAQEVYVG 274
+ + + F E++ G + ++ A +L +G+ L R D + V
Sbjct: 471 DYQDSFTFFSEMQQDGIQPSLVTMLVLLRACAGLALLTKGKELHCFALRRAYDGEVV--- 527
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
V AL+ Y+ G+ A+RVF +Q + C ++ + GQ+ +A F
Sbjct: 528 --VSTALIDMYAKAGSLTSAKRVFGRVQGKNLV----CCNAMLTGLAVHGQAHEAAALFH 581
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLE-RDGFMVGKEASCTLAAWFKRL 393
+M ++GL+P +L+AC + A E+L D+E + G E + R
Sbjct: 582 DMWRSGLKPDGITFTALLTACRSMGLVTEAWEYLDDMEAKYGVAPTAEHHACMVDLLARR 641
Query: 394 GVVEE 398
G ++E
Sbjct: 642 GYLDE 646
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 107/249 (42%), Gaps = 19/249 (7%)
Query: 138 WLAVLK---QLKLMEHPLYL--QVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENT 192
W AV+ +L L++ L L ++A A E+ E + + ++ G + + + A
Sbjct: 248 WNAVIACCVRLGLVDDALELAERMARDAETSEAAEPTLATWNTVLSGCARHGRDREALAV 307
Query: 193 LLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVR 252
+ M +G + D T++ ++ + +G+L E G D + ++V Y +
Sbjct: 308 VRRMLEQGILPDAATVSSLLKSVANSGSLGHGTEVHCFFLRHGLSPDAYTGTALVDMYAK 367
Query: 253 AGMLDRGEVLLREMDAQEVYVGSE-----VYKALLRGYSMNGNSEGAQRVFEAIQFAGIT 307
G LD AQ V+ G E + +L+ G++ G+ + A + EA++ I
Sbjct: 368 CGRLDI---------AQRVFDGLEHRNLATWNSLVAGHANAGHFDRALELVEAMKRHRID 418
Query: 308 PDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
P+ LI Y M G S +A + ++ AG+ P+ ++S + F
Sbjct: 419 PNVTTWNGLITGYAMNGLSSQAMLLLRQIKSAGVAPNVVSWTSLISGSCNGGDYQDSFTF 478
Query: 368 LIDLERDGF 376
++++DG
Sbjct: 479 FSEMQQDGI 487
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 101/237 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y ++G KK +A+ M RG + D T T ++ Y K GN+ A F
Sbjct: 466 DVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLF 525
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E + DK +Y +++ + +AG + R + L +M +++ Y +L G+ +
Sbjct: 526 EAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSS 585
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G A + + + GI P+ C LI Y +G KAY M G+ P
Sbjct: 586 GLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSY 645
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ KE L +A + ++E+ G + F G ++E E VLR+
Sbjct: 646 NTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRK 702
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 80/174 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +++G+ + A N M +G + VT ++ Y ++G++ A E ++
Sbjct: 575 YGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMI 634
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D SY +++ Y++ L++ +L+ EM+ + + Y +L G+ G +
Sbjct: 635 SNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQ 694
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
A++V + GI PD + LIN + ++A+ M + GL P D+
Sbjct: 695 EAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPDDR 748
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 95/240 (39%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
+ +L+ N Y ++ ++ I A+ M RRG + D V+ + ++ + ++
Sbjct: 351 IEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARN 410
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
G+L A F E++ G D Y ++ + R G L + EM A+ ++ Y
Sbjct: 411 GHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTY 470
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
L G A +F + G+ PD LI Y G KA F+ M +
Sbjct: 471 NTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVR 530
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
L+P ++ K ++ RA E D+ R + + T+ F G++ E
Sbjct: 531 TNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPE 590
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 76/171 (44%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M+R G + D V T+++ + + G L A + +E+ G +D +Y + + + M
Sbjct: 423 MERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKM 482
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
++L EM + + + L+RGY +GN + A +FEA+ + PD
Sbjct: 483 FADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNT 542
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALE 366
LI+ + AG+ +A + +M + + P +L+ L AL
Sbjct: 543 LIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALN 593
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 82/200 (41%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E N+ +++ K + +N L M+ +G D VT ++ Y + G ++ A +
Sbjct: 254 ELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQ 313
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
G +Y +++ + G DR + +L EM + + Y LL
Sbjct: 314 LLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEIC 373
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
N AQ +F+ + G+ PD + LI G +A F+ M ++G+ P +
Sbjct: 374 RRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNV 433
Query: 347 CVALILSACEKENQLNRALE 366
+++ + L+ AL+
Sbjct: 434 IYTILIDGFCRNGALSDALK 453
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/242 (19%), Positives = 93/242 (38%), Gaps = 35/242 (14%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E + +T +I GY K + A N AM R D+VT ++ + KAG
Sbjct: 493 MVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGE 552
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGS----------------------------------- 245
+ A+E ++++ D SYG+
Sbjct: 553 MGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNT 612
Query: 246 MVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAG 305
++ Y R+G + + L +M + + S Y L+ GY N E A + ++ G
Sbjct: 613 LIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRG 672
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
+ + L++N + G+ Q+A + M + G+ P + +++ ++ + A
Sbjct: 673 LQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAF 732
Query: 366 EF 367
F
Sbjct: 733 RF 734
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 63/152 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+LE+ N+ +I GY + + A L M G I D + ++ Y K N
Sbjct: 598 MLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEAN 657
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ A E++ G + +Y ++ + G + E +LR+M + Y +
Sbjct: 658 LEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSS 717
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARM 312
L+ G+ N + A R + + G+ PD R
Sbjct: 718 LINGHVSQDNMKEAFRFHDEMLQRGLVPDDRF 749
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 83/215 (38%), Gaps = 30/215 (13%)
Query: 210 VMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQ 269
++V Y +A L+ E F+ ++ G + + ++ VR G +D
Sbjct: 192 LLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVD------------ 239
Query: 270 EVYVGSEVYKALLRG------YSMN--GNSEGAQRVFEAIQF-------AGITPDARMCA 314
+ E+Y ++RG Y++N N+ R FE + F G+ D
Sbjct: 240 ---LAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYN 296
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
LINAY G ++A+ + G+EP IL K + +RA + LI++ +
Sbjct: 297 TLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQL 356
Query: 375 GFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLR 409
G TL R + E + + E R
Sbjct: 357 GLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRR 391
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 58/140 (41%), Gaps = 2/140 (1%)
Query: 272 YVGSE--VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
Y GS +Y L+R Y F+ ++ G++ C L+ G A
Sbjct: 182 YFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLA 241
Query: 330 YTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAW 389
+ + + + G+E + + ++++A K+ + + FL D+E G TL
Sbjct: 242 WEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINA 301
Query: 390 FKRLGVVEEVEHVLREYGLR 409
+ R G+VEE +L + R
Sbjct: 302 YCREGLVEEAFQLLNSFSSR 321
>gi|410110067|gb|AFV61113.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
herrerae]
Length = 433
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 107/219 (48%), Gaps = 4/219 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 216 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDR 275
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ Y +M++AY RAG++ + LL E+ + + + + +L
Sbjct: 276 AAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKSPD-NIPRDTAIHILA 334
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + + F MR G P
Sbjct: 335 G---AGRIEEATYVFRQAIDAGEVKDITVFERMIHLFSKYKKYANVVEVFDKMRGLGYFP 391
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEA 382
+AL+L+A K ++L++A + ++++ G + E
Sbjct: 392 DSNVIALVLNAYGKLHELDKANDVYMEMQEVGCIFSDEV 430
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 101/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + MK G + + + + ++ MY + A
Sbjct: 78 FMPDLVAYNAMINVFGKAKLFREARALISEMKTAGVMPNTASYSTLLTMYVENKKFIEAL 137
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 138 SVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 197
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + ++ Y + +KA Q M+ G+E
Sbjct: 198 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIE 254
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 255 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRL 314
Query: 403 LRE 405
L E
Sbjct: 315 LHE 317
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 101/237 (42%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 116 NTASYSTLLTMYVENKKFIEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 175
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 176 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 235
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G+E
Sbjct: 236 LEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLY 295
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+ + A LA G +EE +V R+
Sbjct: 296 QTMIVAYERAGLVAHAKRLLHELKSPDNIPRDTAIHILAG----AGRIEEATYVFRQ 348
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ A + L M++ D V + ++ + K + A F +K
Sbjct: 15 YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 74
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +M+ + +A + L+ EM V + Y LL Y N
Sbjct: 75 RSGFMPDLVAYNAMINVFGKAKLFREARALISEMKTAGVMPNTASYSTLLTMYVENKKFI 134
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF ++ D C ++I+ Y G +++A F MRK G+EP+
Sbjct: 135 EALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 186
>gi|449433161|ref|XP_004134366.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 917
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 110/252 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E + +I + II + K+ ++ A ++ G + + +M+ Y KA +
Sbjct: 349 MIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGYVKARD 408
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A FEE++ D ++ ++V + R G + G LLR++ + S +
Sbjct: 409 ISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDV 468
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+ G G + A ++ E + GI P +I AY AG ++A+ A+ M K G
Sbjct: 469 TVAGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFG 528
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
L PS + +L + ++ L+ A L D+ GF V A L + R+G V E
Sbjct: 529 LTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAE 588
Query: 401 HVLREYGLRETY 412
+ E R +
Sbjct: 589 SLWNEMKGRGVF 600
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 91/216 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
LL + ++ + II YG + A M + G T + +++ + G+
Sbjct: 489 LLGKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGS 548
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A ++ G P+ ++ ++ Y R G ++ E L EM + V+ + + A
Sbjct: 549 LDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAA 608
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+ G ++G A VF + G P+ + LI + G+ +A + M K G
Sbjct: 609 FINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRG 668
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
L P V +I+ K+ ++ A+E +D+ R G
Sbjct: 669 LLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGL 704
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 77/172 (44%)
Query: 206 VTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLRE 265
V ++ Y AG + A + + G + S++++ VR G LD + L +
Sbjct: 499 VAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYD 558
Query: 266 MDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQ 325
M + V + + LL GY G A+ ++ ++ G+ PDA A IN ++G
Sbjct: 559 MIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGL 618
Query: 326 SQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
AY F +M + G P++ ++ K +LN AL+ + ++ + G +
Sbjct: 619 MTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLL 670
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 70/159 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + F N Y +I G+ K ++ A + M +RG + D T+ +++ K G
Sbjct: 629 MLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGR 688
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+K+A ETF ++ +G D +Y +++ Y +A + + L+ +M Y
Sbjct: 689 MKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNI 748
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+ GY A + E + GI P+ +INA
Sbjct: 749 RIHGYCTVRKINRAVMILEELISVGIVPNTVTYNTMINA 787
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 89/222 (40%)
Query: 156 VAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
+A ++++ F +T ++ GY + + AE+ MK RG D V +
Sbjct: 554 IALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGL 613
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
+G + A + F ++ G + Y S++ + + G L+ L+REM+ + +
Sbjct: 614 CISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDI 673
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
++ G G + A F + G++PD LI+ Y A A
Sbjct: 674 FTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMK 733
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
M +G EP + + ++NRA+ L +L G +
Sbjct: 734 MSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIV 775
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 70/162 (43%)
Query: 182 KKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKR 241
+K + A L M +GF + TV++ Y + G + MAE + E+K G D
Sbjct: 545 RKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAV 604
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI 301
++ + + +G++ + +M + + VY +L+ G+ G A ++ +
Sbjct: 605 AFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREM 664
Query: 302 QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G+ PD ++I G+ + A F +M + GL P
Sbjct: 665 NKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSP 706
>gi|62320586|dbj|BAD95223.1| hypothetical protein [Arabidopsis thaliana]
Length = 778
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 6/185 (3%)
Query: 157 AELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKR---RGFICDQVTLTVMVV 213
E LL + F + R YT ++ GY K ++ + L AM+R R D+VT T +V
Sbjct: 401 GEPPLLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVS 460
Query: 214 MYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYV 273
+ AG + A + E+ +G P ++ +Y ++ Y + +DR E LLREM ++ +
Sbjct: 461 AFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREM-TEDAGI 519
Query: 274 GSEV--YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
+V Y ++ G + +S GA F ++ GI P L+ A+ M+GQ + A
Sbjct: 520 EPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANR 579
Query: 332 AFQNM 336
F M
Sbjct: 580 VFDEM 584
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 100/250 (40%), Gaps = 31/250 (12%)
Query: 156 VAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR-GFICDQVTLTVMV-- 212
+AE+A + AN Y ++ GY K++QI AE+ L M G D V+ +++
Sbjct: 475 LAEMARM--GVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDG 532
Query: 213 --VMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM-DAQ 269
++ AG L F E++ G K SY +++ A+ +G + EM +
Sbjct: 533 CILIDDSAGALAF----FNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDP 588
Query: 270 EVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
V V + L+ GY G E AQRV ++ G P+ L N A + A
Sbjct: 589 RVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDA 648
Query: 330 YTAFQNMRK-------------------AGLEPSDKCVALILSACEKENQLNRALEFLID 370
++ +++ L+P + + + C + +ALE +
Sbjct: 649 LLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIAC 708
Query: 371 LERDGFMVGK 380
+E +G K
Sbjct: 709 MEENGIPPNK 718
>gi|168018631|ref|XP_001761849.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686904|gb|EDQ73290.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 892
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 12/214 (5%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
+ N Y +I G+G + ++ A L M G D T ++++ S N A
Sbjct: 503 IQPNAHCYNPLIMGFGSQARLDRALEVLREMLSAGVQPDSYTYSMLIFACSMVRNEDKAV 562
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
E FEE+ G + Y +M + R G L+R +++E++ + VG++ A+L G
Sbjct: 563 ELFEEMLQRGVQPNAGIYSAMASVFARCGKLERSIEMVKEIERRGEVVGTKAKSAILAGL 622
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP-- 343
S+ G A ++ A++ G P+A +L+ A AG + + F++ RK L
Sbjct: 623 SLAGRLGEALALYGALKREGAFPEAYAAGILLVAVGKAGDLDRMFNIFEDCRKENLWTKL 682
Query: 344 ---------SDKCVALILSACEKENQLNRALEFL 368
+ +C+ ++L C + NQL RALEFL
Sbjct: 683 TYQQRAEFLNVRCINVVL-GCIRHNQLGRALEFL 715
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 6/206 (2%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFE---EIKLLGEPLDKRSYGSMVMAYVR 252
M++RG + +++ G M EE FE + LG +Y ++V V+
Sbjct: 428 MQQRGTKLSPYAFNPFICDFARWG---MYEEAFEMKAAMGRLGVQPSVVTYSTLVNCCVK 484
Query: 253 AGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARM 312
G +++ LL EM + + Y L+ G+ + A V + AG+ PD+
Sbjct: 485 LGDMEQAYNLLAEMKQVGIQPNAHCYNPLIMGFGSQARLDRALEVLREMLSAGVQPDSYT 544
Query: 313 CALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLE 372
++LI A M KA F+ M + G++P+ + + S + +L R++E + ++E
Sbjct: 545 YSMLIFACSMVRNEDKAVELFEEMLQRGVQPNAGIYSAMASVFARCGKLERSIEMVKEIE 604
Query: 373 RDGFMVGKEASCTLAAWFKRLGVVEE 398
R G +VG +A + A G + E
Sbjct: 605 RRGEVVGTKAKSAILAGLSLAGRLGE 630
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 82/181 (45%)
Query: 195 AMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG 254
AM R G VT + +V K G+++ A E+K +G + Y ++M +
Sbjct: 462 AMGRLGVQPSVVTYSTLVNCCVKLGDMEQAYNLLAEMKQVGIQPNAHCYNPLIMGFGSQA 521
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
LDR +LREM + V S Y L+ SM N + A +FE + G+ P+A + +
Sbjct: 522 RLDRALEVLREMLSAGVQPDSYTYSMLIFACSMVRNEDKAVELFEEMLQRGVQPNAGIYS 581
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
+ + + G+ +++ + + + G K + IL+ +L AL L+R+
Sbjct: 582 AMASVFARCGKLERSIEMVKEIERRGEVVGTKAKSAILAGLSLAGRLGEALALYGALKRE 641
Query: 375 G 375
G
Sbjct: 642 G 642
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 37/199 (18%), Positives = 80/199 (40%)
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
+++ K G++ + +E++ G L ++ + + R GM + + M
Sbjct: 404 VFNILIDSCCKHGHVSWGLDLLDEMQQRGTKLSPYAFNPFICDFARWGMYEEAFEMKAAM 463
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
V Y L+ G+ E A + ++ GI P+A LI + +
Sbjct: 464 GRLGVQPSVVTYSTLVNCCVKLGDMEQAYNLLAEMKQVGIQPNAHCYNPLIMGFGSQARL 523
Query: 327 QKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
+A + M AG++P ++++ AC ++A+E ++ + G +
Sbjct: 524 DRALEVLREMLSAGVQPDSYTYSMLIFACSMVRNEDKAVELFEEMLQRGVQPNAGIYSAM 583
Query: 387 AAWFKRLGVVEEVEHVLRE 405
A+ F R G +E +++E
Sbjct: 584 ASVFARCGKLERSIEMVKE 602
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 86/197 (43%), Gaps = 15/197 (7%)
Query: 181 GKKMQIQNAENTLLAMKRRGFICDQVTLTVM--VVMYSKAGNLKMAEETF-------EEI 231
G+ + Q A L ++K+ G +Q+ + + ++ SKA L EET E+
Sbjct: 340 GRHGKHQAAMKCLTSLKKSGGSSEQLNCSFVSYILGSSKAKKL---EETLGLWRDVEEQC 396
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
++ P + ++ + + G + G LL EM + + + + ++ G
Sbjct: 397 RINAPP---EVFNILIDSCCKHGHVSWGLDLLDEMQQRGTKLSPYAFNPFICDFARWGMY 453
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALI 351
E A + A+ G+ P + L+N G ++AY M++ G++P+ C +
Sbjct: 454 EEAFEMKAAMGRLGVQPSVVTYSTLVNCCVKLGDMEQAYNLLAEMKQVGIQPNAHCYNPL 513
Query: 352 LSACEKENQLNRALEFL 368
+ + +L+RALE L
Sbjct: 514 IMGFGSQARLDRALEVL 530
>gi|15232734|ref|NP_187576.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75204290|sp|Q9SF38.1|PP222_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g09650, chloroplastic; AltName: Full=Protein HIGH
CHLOROPHYLL FLUORESCENCE 152; Flags: Precursor
gi|6682243|gb|AAF23295.1|AC016661_20 hypothetical protein [Arabidopsis thaliana]
gi|332641272|gb|AEE74793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 778
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 6/185 (3%)
Query: 157 AELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKR---RGFICDQVTLTVMVV 213
E LL + F + R YT ++ GY K ++ + L AM+R R D+VT T +V
Sbjct: 401 GEPPLLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVS 460
Query: 214 MYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYV 273
+ AG + A + E+ +G P ++ +Y ++ Y + +DR E LLREM ++ +
Sbjct: 461 AFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREM-TEDAGI 519
Query: 274 GSEV--YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
+V Y ++ G + +S GA F ++ GI P L+ A+ M+GQ + A
Sbjct: 520 EPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANR 579
Query: 332 AFQNM 336
F M
Sbjct: 580 VFDEM 584
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 100/250 (40%), Gaps = 31/250 (12%)
Query: 156 VAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR-GFICDQVTLTVMV-- 212
+AE+A + AN Y ++ GY K++QI AE+ L M G D V+ +++
Sbjct: 475 LAEMARM--GVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDG 532
Query: 213 --VMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM-DAQ 269
++ AG L F E++ G K SY +++ A+ +G + EM +
Sbjct: 533 CILIDDSAGALAF----FNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDP 588
Query: 270 EVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
V V + L+ GY G E AQRV ++ G P+ L N A + A
Sbjct: 589 RVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDA 648
Query: 330 YTAFQNMRK-------------------AGLEPSDKCVALILSACEKENQLNRALEFLID 370
++ +++ L+P + + + C + +ALE +
Sbjct: 649 LLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIAC 708
Query: 371 LERDGFMVGK 380
+E +G K
Sbjct: 709 MEENGIPPNK 718
>gi|356569143|ref|XP_003552765.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Glycine max]
Length = 658
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 94/198 (47%), Gaps = 4/198 (2%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
+ N+ Y +I+ YGK ++ + A N + MK+RG + +T + ++ ++ KAG L A
Sbjct: 377 QQNVVTYNTMINIYGKTLEHEKATNLIQEMKKRGIEPNAITYSTIISIWEKAGKLDRAAI 436
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
F++++ G +D+ Y +M++AY RAG++ + LL E+ + L R
Sbjct: 437 LFQKLRSSGVRIDEVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIGILARA-- 494
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G E A VF A D + +IN + + F+ MR G P
Sbjct: 495 --GRIEEATWVFRQAFDAREVKDISVFGCMINLFSKNKKYGNVVEVFEKMRVVGYFPDSD 552
Query: 347 CVALILSACEKENQLNRA 364
+AL+L+A K + ++A
Sbjct: 553 VIALVLNAFGKLREFDKA 570
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 93/233 (39%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+ +GK + A L M+ D V+ + ++ +Y A F E+
Sbjct: 243 YNSMINVFGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFFEMN 302
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
PLD + M+ Y + M + L M + Y LLR Y
Sbjct: 303 EAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVVSYNTLLRVYGEADLFG 362
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +F +Q + + +IN Y + +KA Q M+K G+EP+ + I+
Sbjct: 363 EAIHLFRLMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMKKRGIEPNAITYSTII 422
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
S EK +L+RA L G + + T+ ++R G+V + +L E
Sbjct: 423 SIWEKAGKLDRAAILFQKLRSSGVRIDEVLYQTMIVAYERAGLVAHAKRLLHE 475
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 4/233 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ ++ Y + A + M D T +M+ +Y + K A+ F ++
Sbjct: 278 YSTLLAIYVDNQKFVEALSLFFEMNEAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMR 337
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+G + SY +++ Y A + L R M +++V Y ++ Y E
Sbjct: 338 KMGIQPNVVSYNTLLRVYGEADLFGEAIHLFRLMQSKDVQQNVVTYNTMINIYGKTLEHE 397
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + ++ GI P+A + +I+ ++ AG+ +A FQ +R +G+ + ++
Sbjct: 398 KATNLIQEMKKRGIEPNAITYSTIISIWEKAGKLDRAAILFQKLRSSGVRIDEVLYQTMI 457
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
A E+ + A L +L+R + A LA R G +EE V R+
Sbjct: 458 VAYERAGLVAHAKRLLHELKRPDNIPRDTAIGILA----RAGRIEEATWVFRQ 506
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 73/172 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK ++ L M++ D V + ++ + K + A F +K
Sbjct: 173 YSTLITSFGKHGLFDSSLFWLQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLK 232
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
D +Y SM+ + +A + +LL+EM V + Y LL Y N
Sbjct: 233 ASTISPDLIAYNSMINVFGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFV 292
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A +F + A D C ++I+ Y ++A F +MRK G++P+
Sbjct: 293 EALSLFFEMNEAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPN 344
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/170 (20%), Positives = 71/170 (41%), Gaps = 8/170 (4%)
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
+A +A F+E++ G D+ +Y +++ ++ + G+ D L++M+ V
Sbjct: 147 RAKQWHLAHGLFDEMRQKGLSPDRYTYSTLITSFGKHGLFDSSLFWLQQMEQDNVSGDLV 206
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
+Y L+ + A +F ++ + I+PD +IN + A ++A Q M
Sbjct: 207 LYSNLIDLARKLSDYSKAISIFSRLKASTISPDLIAYNSMINVFGKAKLFREARLLLQEM 266
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
R ++P + +L+ + AL ++ EA C L
Sbjct: 267 RDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFFEM--------NEAKCPL 308
>gi|449459510|ref|XP_004147489.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Cucumis sativus]
gi|449530101|ref|XP_004172035.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Cucumis sativus]
Length = 680
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 105/222 (47%), Gaps = 4/222 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I YGK ++ + A N + M++RG + +T + ++ ++ KAG L + F
Sbjct: 403 NVVTYNTMIKIYGKTLEHEKATNLVQDMQKRGIEPNAITYSTIISIWGKAGKLDRSAMLF 462
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++++ G +D+ Y +M++AY +AG++ + LL E+ + + L +
Sbjct: 463 QKLRSSGAEIDQVLYQTMIVAYEKAGLVGHAKRLLHELKQPDNIPRTTAITILAKA---- 518
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G E A VF AG D + +I+ + + + F+ MR G P+ +
Sbjct: 519 GRIEEATWVFRQAFDAGELKDISVFECMIDLFSRNKKHKNVLEVFEKMRNVGHFPNSDVI 578
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWF 390
AL+L+A K + A ++++ +G + E + + +
Sbjct: 579 ALVLNAYGKLRDFDTADALYMEMQEEGCVFTDEVHFQMLSLY 620
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 102/233 (43%), Gaps = 4/233 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +++ + + + A + + MK D T +M+ +Y + +K A+ F ++
Sbjct: 302 YSTLLNMFVENEKFLEALSVISEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMR 361
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+G + SY +++ Y A + L R M +E+ Y +++ Y E
Sbjct: 362 KIGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIKQNVVTYNTMIKIYGKTLEHE 421
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + +Q GI P+A + +I+ + AG+ ++ FQ +R +G E ++
Sbjct: 422 KATNLVQDMQKRGIEPNAITYSTIISIWGKAGKLDRSAMLFQKLRSSGAEIDQVLYQTMI 481
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
A EK + A L +L++ + A LA + G +EE V R+
Sbjct: 482 VAYEKAGLVGHAKRLLHELKQPDNIPRTTAITILA----KAGRIEEATWVFRQ 530
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 98/237 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I Y +I+ +GK + A L M+ + D V+ + ++ M+ + A
Sbjct: 263 DIVAYNTMINVFGKAKLFREARFLLKEMRAVDVMPDTVSYSTLLNMFVENEKFLEALSVI 322
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E+K + PLD + M+ Y + M+ + L M + Y +LR Y
Sbjct: 323 SEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMRKIGIEPNVVSYNTILRVYGEA 382
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
A +F +Q I + +I Y + +KA Q+M+K G+EP+
Sbjct: 383 ELFGEAIHLFRLMQRKEIKQNVVTYNTMIKIYGKTLEHEKATNLVQDMQKRGIEPNAITY 442
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ I+S K +L+R+ L G + + T+ +++ G+V + +L E
Sbjct: 443 STIISIWGKAGKLDRSAMLFQKLRSSGAEIDQVLYQTMIVAYEKAGLVGHAKRLLHE 499
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 85/197 (43%), Gaps = 5/197 (2%)
Query: 148 MEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVT 207
+ H L+ ++ + AL + + Y+ +I +GK+ A + L M++ D V
Sbjct: 177 LAHGLFDEMRQRALAADRYT-----YSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVL 231
Query: 208 LTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMD 267
+ ++ + K + A F +K G D +Y +M+ + +A + LL+EM
Sbjct: 232 YSNLIELSRKLCDYSKAISIFSRLKRSGITPDIVAYNTMINVFGKAKLFREARFLLKEMR 291
Query: 268 AQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQ 327
A +V + Y LL + N A V ++ D C ++I+ Y +
Sbjct: 292 AVDVMPDTVSYSTLLNMFVENEKFLEALSVISEMKEVNCPLDLTTCNIMIDVYGQLDMVK 351
Query: 328 KAYTAFQNMRKAGLEPS 344
+A F MRK G+EP+
Sbjct: 352 EADRLFWRMRKIGIEPN 368
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 73/170 (42%), Gaps = 8/170 (4%)
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
+A ++A F+E++ D+ +Y +++ + + GM D L++M+ V
Sbjct: 171 RAKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLV 230
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
+Y L+ + A +F ++ +GITPD +IN + A ++A + M
Sbjct: 231 LYSNLIELSRKLCDYSKAISIFSRLKRSGITPDIVAYNTMINVFGKAKLFREARFLLKEM 290
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
R + P + +L+ + + AL + ++ KE +C L
Sbjct: 291 RAVDVMPDTVSYSTLLNMFVENEKFLEALSVISEM--------KEVNCPL 332
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 116/256 (45%), Gaps = 8/256 (3%)
Query: 153 YLQVAEL----ALLEESFEANIR----DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICD 204
Y QV +L + E+ +IR Y +I+G K + AE+ ++ M++ G
Sbjct: 379 YCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPS 438
Query: 205 QVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLR 264
T ++ Y AG L+ +++ G D S+GS+V A+ + G + +L
Sbjct: 439 VETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILD 498
Query: 265 EMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAG 324
+M ++V ++VY +++ Y +G++E A + E ++ +G++ LL+ +
Sbjct: 499 DMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSS 558
Query: 325 QSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASC 384
Q +A +R GL P I+SAC + ++ALE L ++ + G
Sbjct: 559 QIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYH 618
Query: 385 TLAAWFKRLGVVEEVE 400
TL + G V ++E
Sbjct: 619 TLVSALASAGRVHDME 634
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 112/242 (46%), Gaps = 3/242 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+GY + ++ A MK R D +T ++ K + AE+ E++
Sbjct: 372 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 431
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G ++ +++ AY AG L++ +L +M + + + ++++ + NG
Sbjct: 432 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 491
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + + + + P+A++ +I+AY +G +++A+ + M+ +G+ S L+L
Sbjct: 492 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLL 551
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE---YGLR 409
+ +Q++ A E + L G + T+ + G ++ +L+E YG+R
Sbjct: 552 KGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIR 611
Query: 410 ET 411
T
Sbjct: 612 PT 613
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 100/226 (44%)
Query: 129 RFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQN 188
R ++P + A++ L +E + + + + + ++ + +I YG Q++
Sbjct: 398 RHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEK 457
Query: 189 AENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVM 248
L M+++G D ++ +V + K G + A +++ + + Y S++
Sbjct: 458 CFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIID 517
Query: 249 AYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITP 308
AY+ +G ++ +L+ +M V Y LL+G + + A+ + ++ G+ P
Sbjct: 518 AYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRP 577
Query: 309 DARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSA 354
D +I+A G + KA Q M K G+ P+ + ++SA
Sbjct: 578 DVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSA 623
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/268 (18%), Positives = 101/268 (37%), Gaps = 35/268 (13%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G + + +A M G + + +T M+ + K G+L+ +++
Sbjct: 197 YNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQML 256
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY-------------------- 272
G + +Y ++ RAG +D VL+ EM + ++
Sbjct: 257 HDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESR 316
Query: 273 ---------------VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
+G+ LL G +G A++V E + G+ P + LI
Sbjct: 317 TMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLI 376
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
N Y + A+ F+ M+ + P +++ K + +A + ++++E+ G
Sbjct: 377 NGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVD 436
Query: 378 VGKEASCTLAAWFKRLGVVEEVEHVLRE 405
E TL + G +E+ VL +
Sbjct: 437 PSVETFNTLIDAYGTAGQLEKCFTVLSD 464
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/174 (20%), Positives = 75/174 (43%)
Query: 198 RRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLD 257
++G + T ++++ K G + AE+ E + G Y +++ Y + L
Sbjct: 327 KKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLR 386
Query: 258 RGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
+ +M ++ + Y AL+ G A+ + ++ +G+ P LI
Sbjct: 387 GAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLI 446
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDL 371
+AY AGQ +K +T +M++ G++ ++ A K ++ A+ L D+
Sbjct: 447 DAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDM 500
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/245 (19%), Positives = 95/245 (38%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + + NI Y ++ G + ++ + M D T +++ ++ G
Sbjct: 255 MLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGE 314
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ F E G L + ++ + G + + E +L + + + +Y
Sbjct: 315 SRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNT 374
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ GY + GA +FE ++ I PD LIN KA M K+G
Sbjct: 375 LINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSG 434
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
++PS + ++ A QL + L D+++ G + ++ F + G + E
Sbjct: 435 VDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAV 494
Query: 401 HVLRE 405
+L +
Sbjct: 495 AILDD 499
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/177 (19%), Positives = 72/177 (40%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N + Y II Y + + A + MK G VT +++ ++ + AEE
Sbjct: 508 NAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELI 567
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ G D SY +++ A G D+ LL+EM+ + Y L+ +
Sbjct: 568 YTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASA 627
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
G + +++ + + P + + ++++AY K + + M + G+ D
Sbjct: 628 GRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFDD 684
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 110/246 (44%), Gaps = 2/246 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L++ + N+ Y +I+G +I A + M G + +T ++ + K
Sbjct: 322 MLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDM 381
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
LK A + F +K G R Y ++ AY + G +D G L EM+ + + Y
Sbjct: 382 LKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNC 441
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G NGN E A+++F+ + G+ PD +L+ Y G+S+KA + M K G
Sbjct: 442 LIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMG 500
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCT-LAAWFKRLGVVEEV 399
L+P +++ KE L A +E++ + AS L + + G +E+
Sbjct: 501 LKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDA 560
Query: 400 EHVLRE 405
+L E
Sbjct: 561 NMLLNE 566
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 91/206 (44%), Gaps = 3/206 (1%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVR--- 252
M RR + T V++ K G + A + E++K+ G + SY +++ Y +
Sbjct: 214 MIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGG 273
Query: 253 AGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARM 312
G + + + +L+EM +V + L+ G+ + N G+ +VF+ + + P+
Sbjct: 274 NGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVIS 333
Query: 313 CALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLE 372
LIN G+ +A + M AG++P+ +++ K + L AL+ ++
Sbjct: 334 YNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVK 393
Query: 373 RDGFMVGKEASCTLAAWFKRLGVVEE 398
G + L + +LG +++
Sbjct: 394 GQGAVPTTRMYNMLIDAYCKLGKIDD 419
Score = 38.1 bits (87), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 63/147 (42%), Gaps = 2/147 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
E ++ Y +I G + I+ A+ + +G + D VT +++ Y + G +
Sbjct: 430 EGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRK 488
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE-VYVGSEVYKALL 282
A +E+ +G +Y ++ Y + G L + +M+ + + + Y LL
Sbjct: 489 AAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLL 548
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPD 309
+GYS G E A + + G+ P+
Sbjct: 549 QGYSQKGKLEDANMLLNEMLEKGLVPN 575
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 108/251 (43%), Gaps = 4/251 (1%)
Query: 160 ALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
AL EE F ++ Y+ +IHG K + AMK +G + D + +
Sbjct: 568 ALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGF 627
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
K+G + A + EE+K G +YGS++ + LD +L E + + +
Sbjct: 628 CKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNV 687
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
+Y +L+ G+ G + A + E + G+TP+ L++A A + +A FQN
Sbjct: 688 VIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQN 747
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGV 395
M+ P+ +++++ + + N+A F ++++ G T+ A + G
Sbjct: 748 MKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGN 807
Query: 396 VEEVEHVLREY 406
+ E + +
Sbjct: 808 IAEASSLFERF 818
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 105/266 (39%), Gaps = 8/266 (3%)
Query: 157 AELALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMV 212
A L+LL+E A+I Y I +GK ++ A +K G + D VT T M+
Sbjct: 251 AALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMI 310
Query: 213 VMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY 272
+ K L A E FE+++ +Y +M+M Y AG D LL A+
Sbjct: 311 GVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCI 370
Query: 273 VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTA 332
Y +L G A R FE ++ P+ +LI+ AG+ + A+
Sbjct: 371 PSVIAYNCILTCLGKKGRLGEALRTFEEMK-KDAAPNLSTYNVLIDMLCKAGEVEAAFKV 429
Query: 333 FQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKR 392
M++AGL P+ V +++ K +L+ A + + T +
Sbjct: 430 RDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHK---ICSPDEVTFCSLIDG 486
Query: 393 LGVVEEVEHVLREYGLRETYSKIPGS 418
LG V+ R Y KIP +
Sbjct: 487 LGKQGRVDDAYRLYEQMLDSDKIPNA 512
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 98/237 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I K +++ A AMK G + +T+ +M+ KA L A F
Sbjct: 406 NLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIF 465
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E + D+ ++ S++ + G +D L +M + + VY +L++ +
Sbjct: 466 EGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKC 525
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G E ++F+ + G +PD R+ ++ AG++ K F+ ++ G P
Sbjct: 526 GRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSY 585
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++++ K E ++ G ++ A T F + G V + +L E
Sbjct: 586 SILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEE 642
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 4/208 (1%)
Query: 161 LLEES----FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS 216
L EE+ E N+ Y+ +I G+GK +I A + + ++G + T ++
Sbjct: 674 LFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALV 733
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
KA + A F+ +K L + +Y ++ R ++ V +EM Q + +
Sbjct: 734 KAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTI 793
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
Y ++ G + GN A +FE + G PD+ +I + ++ +AY F+
Sbjct: 794 TYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEET 853
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRA 364
R G K +L A +K+ L +A
Sbjct: 854 RMKGCNIHTKTCIALLDALQKDECLEQA 881
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 79/187 (42%), Gaps = 5/187 (2%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
L+ Q+ EL +E ++ +T +I + ++ ++ A + L MK D V V
Sbjct: 220 LFHQMQELG-----YEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVC 274
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ + KAG + MA + F EIK G D +Y SM+ + LD + +M+
Sbjct: 275 IDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRN 334
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
+ Y ++ GY G + A + E + G P ++ G+ +A
Sbjct: 335 VPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALR 394
Query: 332 AFQNMRK 338
F+ M+K
Sbjct: 395 TFEEMKK 401
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/233 (19%), Positives = 96/233 (41%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+ +I G GK+ ++ +A M I + V T ++ + K G + + F+E+
Sbjct: 480 FCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMI 539
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D R + + +AG +G L E+ ++ Y L+ G G +
Sbjct: 540 HRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFAR 599
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
+F A++ G D I+ + +G+ KAY + M+ G +P+ ++
Sbjct: 600 ETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVI 659
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
K ++L+ A + + +G + +L F ++G ++E ++ E
Sbjct: 660 DGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEE 712
Score = 37.7 bits (86), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 22/114 (19%), Positives = 51/114 (44%)
Query: 261 VLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAY 320
L +M V ++ ++R ++ G + A + + ++ + D + + I+ +
Sbjct: 219 TLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCF 278
Query: 321 QMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
AG+ A+ F ++ GL P D ++ K N+L+ A+E +E++
Sbjct: 279 GKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQN 332
>gi|357128238|ref|XP_003565781.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Brachypodium distachyon]
Length = 547
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 1/200 (0%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRG-FICDQVTLTVMVVMYSKAGNLKMA 224
+A++ DY +I K Q++ A MKR G F+ D T TV++ + +L M
Sbjct: 226 LKADLSDYNWLIDVLSKSKQVKKAHAIFKEMKRNGRFVPDLKTYTVLMEGWGHEKDLLML 285
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
+ ++E+ G D +YG+++ ++ ++G D + REM+A VY L+ G
Sbjct: 286 KSVYQEMLDAGIKPDVVAYGTLISSFCKSGKCDEAIKVFREMEANGCMPSPHVYCMLING 345
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
+ A + FE + +G + C ++ AY + + Q A+ MRK G+ P+
Sbjct: 346 LGSEERLDEALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKTGIGPN 405
Query: 345 DKCVALILSACEKENQLNRA 364
+ +IL K ++ A
Sbjct: 406 ARTYDIILQYLIKSQKIEEA 425
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 99/215 (46%), Gaps = 2/215 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
++ F + +I GK Q + + + AM+ RG + + T ++V Y++A +K
Sbjct: 154 QQGFRYTAESFHNLIEALGKIKQFRLVWSLVEAMRCRGLL-SKDTFRLIVRRYARARKVK 212
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS-EVYKAL 281
A ETFE++ G D Y ++ ++ + + + +EM +V + Y L
Sbjct: 213 EAVETFEKMSSFGLKADLSDYNWLIDVLSKSKQVKKAHAIFKEMKRNGRFVPDLKTYTVL 272
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+ G+ + + V++ + AGI PD LI+++ +G+ +A F+ M G
Sbjct: 273 MEGWGHEKDLLMLKSVYQEMLDAGIKPDVVAYGTLISSFCKSGKCDEAIKVFREMEANGC 332
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
PS ++++ E +L+ AL++ + GF
Sbjct: 333 MPSPHVYCMLINGLGSEERLDEALKYFELSKASGF 367
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 33/171 (19%), Positives = 74/171 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+G G + ++ A K GF + T +V Y ++ + A + +E++
Sbjct: 339 YCMLINGLGSEERLDEALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMR 398
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + R+Y ++ +++ ++ + + M + Y ++ + N +
Sbjct: 399 KTGIGPNARTYDIILQYLIKSQKIEEAYNVFQRMGMEGCEPQLNTYTMMVGMFCSNERVD 458
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
A +V++ ++ G+ P M + LIN + ++A FQ M G+ P
Sbjct: 459 MALKVWKQMKEKGVLPCMHMFSSLINGLCFENRLEEACVYFQEMLDKGIRP 509
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 60/332 (18%), Positives = 129/332 (38%), Gaps = 29/332 (8%)
Query: 44 KWSRSLRSGPALEAIKAEDMGKTQVKDDTSMFTWIQIGPNITEEQKQAISQFPRKMTKRC 103
+++R+ + A+E E M +K D S + W+ + +++ K+A + F K KR
Sbjct: 204 RYARARKVKEAVETF--EKMSSFGLKADLSDYNWLIDVLSKSKQVKKAHAIF--KEMKRN 259
Query: 104 KAFVKQIICVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLE 163
FV P+ + L+ W ++ LM +Y + +L+
Sbjct: 260 GRFV-------PDLKTYTVLMEGWGH-------------EKDLLMLKSVYQE-----MLD 294
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ ++ Y +I + K + A M+ G + +++ L
Sbjct: 295 AGIKPDVVAYGTLISSFCKSGKCDEAIKVFREMEANGCMPSPHVYCMLINGLGSEERLDE 354
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A + FE K G P++ + ++V AY R+ ++ EM + + Y +L+
Sbjct: 355 ALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKTGIGPNARTYDIILQ 414
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
+ E A VF+ + G P +++ + + A ++ M++ G+ P
Sbjct: 415 YLIKSQKIEEAYNVFQRMGMEGCEPQLNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLP 474
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDG 375
+ +++ EN+L A + ++ G
Sbjct: 475 CMHMFSSLINGLCFENRLEEACVYFQEMLDKG 506
>gi|225446761|ref|XP_002278350.1| PREDICTED: pentatricopeptide repeat-containing protein At3g59040
[Vitis vinifera]
gi|302143502|emb|CBI22063.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 104/217 (47%), Gaps = 10/217 (4%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
++ + ++ +T ++ YGK Q AE+ M G +T +++ ++ + K
Sbjct: 168 KKGYSPSVISHTALMEAYGKGKQYNKAESVFRRMLSSGPEPSALTYQLILKIFVEGNKFK 227
Query: 223 MAEETFEEIKLLGE---PL--DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
AEETFE LL + PL D++ + M+ Y +AG ++ + M + V +
Sbjct: 228 EAEETFE--TLLDDEKSPLKPDQKMFHMMIYMYRKAGNYEKARKIFGLMRERGVPQSTVT 285
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y +L+ S N + + ++ +Q AG+ PD ALLINAY A + ++A F+ M
Sbjct: 286 YNSLM---SFETNYKEVSKTYDQMQRAGLRPDVVSYALLINAYGKARREEEALAVFEEML 342
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
AG+ P+ K ++L A +++A + RD
Sbjct: 343 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKSMRRD 379
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 78/175 (44%), Gaps = 4/175 (2%)
Query: 159 LALLEESFEANIRD----YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
LA+ EE +A +R Y ++ + + A +M+R D + T M+
Sbjct: 335 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKSMRRDRCTPDICSYTTMLSA 394
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
Y A +++ AE+ F +K G + +YG+++ Y + L++ EM +
Sbjct: 395 YVNASDMEGAEKFFRRLKQDGFEPNVVTYGTLIKGYAKISNLEKMMEKYEEMQVHGIKAN 454
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
+Y A++ Y N + A F+ + F G+ PD + +L++ + + ++A
Sbjct: 455 QAIYTAMMDAYGKNKDFGSAVFWFKEMGFCGVPPDRKATNILLSLAKTEAEKEEA 509
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 108/256 (42%), Gaps = 27/256 (10%)
Query: 163 EESFEANIRD-----------YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
EE+FE + D + +I+ Y K + A M+ RG Q T+T
Sbjct: 230 EETFETLLDDEKSPLKPDQKMFHMMIYMYRKAGNYEKARKIFGLMRERG--VPQSTVTYN 287
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+M S N K +T+++++ G D SY ++ AY +A + + EM V
Sbjct: 288 SLM-SFETNYKEVSKTYDQMQRAGLRPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 346
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
+ Y LL ++++G + A+ VF++++ TPD +++AY A + A
Sbjct: 347 RPTHKAYNILLDAFAISGMVDQARTVFKSMRRDRCTPDICSYTTMLSAYVNASDMEGAEK 406
Query: 332 AFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMV------------G 379
F+ +++ G EP+ ++ K + L + +E +++ G G
Sbjct: 407 FFRRLKQDGFEPNVVTYGTLIKGYAKISNLEKMMEKYEEMQVHGIKANQAIYTAMMDAYG 466
Query: 380 KEASCTLAA-WFKRLG 394
K A WFK +G
Sbjct: 467 KNKDFGSAVFWFKEMG 482
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 80/196 (40%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y +I+ YGK + + A M G +++ ++ +G + A F
Sbjct: 314 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 373
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ ++ D SY +M+ AYV A ++ E R + Y L++GY+
Sbjct: 374 KSMRRDRCTPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFEPNVVTYGTLIKGYAKI 433
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
N E +E +Q GI + + +++AY A F+ M G+ P K
Sbjct: 434 SNLEKMMEKYEEMQVHGIKANQAIYTAMMDAYGKNKDFGSAVFWFKEMGFCGVPPDRKAT 493
Query: 349 ALILSACEKENQLNRA 364
++LS + E + A
Sbjct: 494 NILLSLAKTEAEKEEA 509
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 6/137 (4%)
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ Y G+ A+RVF + G +P L+ AY Q KA + F+ M +G
Sbjct: 146 LVTAYGKQGDFNKAERVFGDMHKKGYSPSVISHTALMEAYGKGKQYNKAESVFRRMLSSG 205
Query: 341 LEPSDKCVALILSACEKENQLNRA---LEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
EPS LIL + N+ A E L+D E+ ++ + +++ G E
Sbjct: 206 PEPSALTYQLILKIFVEGNKFKEAEETFETLLDDEKSPLKPDQKMFHMMIYMYRKAGNYE 265
Query: 398 EVEHV---LREYGLRET 411
+ + +RE G+ ++
Sbjct: 266 KARKIFGLMRERGVPQS 282
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 101/217 (46%), Gaps = 4/217 (1%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
+ NI Y I++G K I+ A + + G D VT T ++ Y K+G + A+E
Sbjct: 931 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 990
Query: 227 TFEEIKLLGEPLDKR--SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
+E +LG+ L ++ ++ + GML+ GE LL M A+ + + + +L++
Sbjct: 991 ILKE--MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQ 1048
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
Y + N + A +++ + G+ PD + L+ + A ++A+ FQ M+ G S
Sbjct: 1049 YCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVS 1108
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDGFMVGKE 381
++++ K + A E + R+G KE
Sbjct: 1109 VSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKE 1145
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 110/249 (44%), Gaps = 1/249 (0%)
Query: 159 LALLE-ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSK 217
L L+E + + ++ Y+ +++GY + ++ + MKR+G + ++ + +
Sbjct: 712 LLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCR 771
Query: 218 AGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
L AEE F E+ G D Y +++ + + G + EM ++++
Sbjct: 772 ICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLT 831
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y A++ G+ G+ A ++F + G+ PD+ LIN Y AG + A+ +M
Sbjct: 832 YTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI 891
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
+AG P+ ++ KE L+ A E L ++ + G ++ + G +E
Sbjct: 892 QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 951
Query: 398 EVEHVLREY 406
E ++ E+
Sbjct: 952 EAVKLVGEF 960
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 83/197 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +IH + +I+ A + LL M+ +G+ D ++ + +V Y + G L +
Sbjct: 688 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 747
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E +K G + YGS++ R L E EM Q + + VY L+ G+
Sbjct: 748 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 807
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G+ A + F + ITPD +I+ + G +A F M GLEP
Sbjct: 808 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 867
Query: 349 ALILSACEKENQLNRAL 365
+++ K + A
Sbjct: 868 TELINGYCKAGHMKDAF 884
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 103/260 (39%), Gaps = 8/260 (3%)
Query: 152 LYLQVAELALLEESFEANIRD--------YTKIIHGYGKKMQIQNAENTLLAMKRRGFIC 203
L ++ +LA EE+F IR YT +I G+ K+ I+ A M R
Sbjct: 768 LLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITP 827
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D +T T ++ + + G++ A + F E+ G D ++ ++ Y +AG + +
Sbjct: 828 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 887
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
M Y L+ G G+ + A + + G+ P+ ++N +
Sbjct: 888 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 947
Query: 324 GQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEAS 383
G ++A AGL ++ A K ++++A E L ++ G
Sbjct: 948 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 1007
Query: 384 CTLAAWFKRLGVVEEVEHVL 403
L F G++E+ E +L
Sbjct: 1008 NVLMNGFCLHGMLEDGEKLL 1027
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 116/283 (40%), Gaps = 38/283 (13%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ E + +T++I+GY K +++A M + G + VT T ++ K G+L
Sbjct: 858 KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 917
Query: 224 AEETFEE-----------------------------IKLLGE------PLDKRSYGSMVM 248
A E E +KL+GE D +Y +++
Sbjct: 918 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 977
Query: 249 AYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITP 308
AY ++G +D+ + +L+EM + + + L+ G+ ++G E +++ + GI P
Sbjct: 978 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 1037
Query: 309 DARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFL 368
+A L+ Y + + A +++M G+ P K ++ K + A
Sbjct: 1038 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 1097
Query: 369 IDLERDGFMVGKEA-SCTLAAWFKRLGVVE--EVEHVLREYGL 408
+++ GF V S + + KR +E EV +R GL
Sbjct: 1098 QEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 1140
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 67/152 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + + I + +++G+ +++ E L M +G + T +V Y N
Sbjct: 995 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 1054
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
LK A ++++ G D ++Y ++V + +A + L +EM + V Y
Sbjct: 1055 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 1114
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARM 312
L++G+ A+ VF+ ++ G+ D +
Sbjct: 1115 LIKGFLKRKKFLEAREVFDQMRREGLAADKEI 1146
Score = 38.5 bits (88), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 30/150 (20%), Positives = 57/150 (38%)
Query: 261 VLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAY 320
++ RE V Y ++ G + A + ++ G TPD + ++N Y
Sbjct: 675 IVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGY 734
Query: 321 QMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGK 380
G+ K + + M++ GL+P+ I+ + +L A E ++ R G +
Sbjct: 735 CRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDT 794
Query: 381 EASCTLAAWFKRLGVVEEVEHVLREYGLRE 410
TL F + G + E R+
Sbjct: 795 VVYTTLIDGFCKRGDIRAASKFFYEMHSRD 824
>gi|359487410|ref|XP_002273156.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Vitis vinifera]
Length = 538
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 118/277 (42%), Gaps = 4/277 (1%)
Query: 132 KPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAEN 191
+PR + +L L + P + +L E + YT ++ YG Q+ A
Sbjct: 125 EPRCQTYTKLLMMLGKCKQPEQASLLFEVMLSEGLRPTLDVYTALVSAYGHSGQLDKAFC 184
Query: 192 TLLAMKRRGFIC--DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMA 249
T+ MK C D T ++++ + G + E F E+ LG +Y +++
Sbjct: 185 TVEDMKSVS-DCKPDVYTYSILIKCCTTLGRFDLIERIFTEMSYLGIECSTVTYNTIIDG 243
Query: 250 YVRAGMLDRGEVLLREM-DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITP 308
Y +A M + E L EM ++ + + Y +G E ++ ++ Q GI P
Sbjct: 244 YGKADMFELMESSLTEMIESGTCLPDIFTLNSFIWAYGNSGQIEKMEKWYDEFQLMGIRP 303
Query: 309 DARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFL 368
D + +LI +Y A +K + + M+K P+ +++ + + + EF
Sbjct: 304 DIKTFNILIRSYGKACMYEKMVSVMEFMKKRFYSPTIVTFNIVIEMFGRVGNIEKMEEFF 363
Query: 369 IDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ ++ G C+L + + + G +++V+ +LR+
Sbjct: 364 LKMKHQGVKPNSITYCSLVSAYSKAGYLKKVDSILRQ 400
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 83/168 (49%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I+ + +I YGK + + + MK+R + VT +++ M+ + GN++ EE F
Sbjct: 304 DIKTFNILIRSYGKACMYEKMVSVMEFMKKRFYSPTIVTFNIVIEMFGRVGNIEKMEEFF 363
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++K G + +Y S+V AY +AG L + + +LR+++ +V + + + +L Y
Sbjct: 364 LKMKHQGVKPNSITYCSLVSAYSKAGYLKKVDSILRQIENSDVTLDTPFFNCVLSAYGQA 423
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
G+ E +F ++ PD A +I AY G + A NM
Sbjct: 424 GDVERMGELFLVMKERKCKPDNITFATMIQAYNAQGMIEAAQNLEVNM 471
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 98/221 (44%), Gaps = 13/221 (5%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRG-FICDQVTLTVMVVMYSKAGNLKMAE 225
E + Y II GYGK + E++L M G + D TL + Y +G ++ E
Sbjct: 231 ECSTVTYNTIIDGYGKADMFELMESSLTEMIESGTCLPDIFTLNSFIWAYGNSGQIEKME 290
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+ ++E +L+G D +++ ++ +Y +A M ++ ++ M + + ++ +
Sbjct: 291 KWYDEFQLMGIRPDIKTFNILIRSYGKACMYEKMVSVMEFMKKRFYSPTIVTFNIVIEMF 350
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
GN E + F ++ G+ P++ L++AY AG +K + + + + +
Sbjct: 351 GRVGNIEKMEEFFLKMKHQGVKPNSITYCSLVSAYSKAGYLKKVDSILRQIENSDVTLDT 410
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDG--FMVGKEASC 384
+LSA + D+ER G F+V KE C
Sbjct: 411 PFFNCVLSAYGQAG----------DVERMGELFLVMKERKC 441
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 61/132 (46%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
+ I + +I +G+ I+ E L MK +G + +T +V YSKAG LK +
Sbjct: 336 YSPTIVTFNIVIEMFGRVGNIEKMEEFFLKMKHQGVKPNSITYCSLVSAYSKAGYLKKVD 395
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+I+ LD + ++ AY +AG ++R L M ++ + + +++ Y
Sbjct: 396 SILRQIENSDVTLDTPFFNCVLSAYGQAGDVERMGELFLVMKERKCKPDNITFATMIQAY 455
Query: 286 SMNGNSEGAQRV 297
+ G E AQ +
Sbjct: 456 NAQGMIEAAQNL 467
>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 96/192 (50%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y + G + ++++A+ L M G + V+ T ++ ++SK G++ A F
Sbjct: 342 DVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLF 401
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+++ G +Y M+ Y+++G + E +EM+ + + Y AL+ G+ +N
Sbjct: 402 RDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVN 461
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A R+FE ++ G P+ LI+ G+S++A+ + NM AGL P D
Sbjct: 462 GKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLY 521
Query: 349 ALILSACEKENQ 360
++++ + + +
Sbjct: 522 SMLVGSLHTDKR 533
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 101/234 (43%)
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA 224
E N R Y +I+G+ K QI+ AE L M+ RG +Q+ M+ Y + G + A
Sbjct: 268 GIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKA 327
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
E ++ +G LD +Y ++ R ++ + LL M V Y L+
Sbjct: 328 LEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISI 387
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
+S G+ A+R+F ++ G P ++I+ Y +G ++A + M K GL P
Sbjct: 388 HSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPD 447
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
A ++ +++ AL ++++ G A L + + G EE
Sbjct: 448 VYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEE 501
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 99/239 (41%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E + YT ++ G I E+ +KR+ D + ++ Y +AGN++ A E
Sbjct: 200 EPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRASE 259
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
F+E G ++R+YG+++ + + G ++ E+LL +M + V ++ ++ GY
Sbjct: 260 VFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYC 319
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
+G + A + ++ GI D L + + A M + G+E +
Sbjct: 320 RHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYV 379
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++S KE + A D+E G + + + G + E E +E
Sbjct: 380 SYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKE 438
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 100/240 (41%), Gaps = 3/240 (1%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
++ G+ K ++ +A L M R G + ++ Y++ N E +E++ G
Sbjct: 139 VVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMESGG 198
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
+Y +V AG + + E + E+ + V Y A++ Y GN A
Sbjct: 199 VEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRAS 258
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
VF+ GI P+ R LIN + GQ + A +M+ G+ + ++
Sbjct: 259 EVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGY 318
Query: 356 EKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE---HVLREYGLRETY 412
+ +++ALE +ER G + TLA R+ +E+ + H++ E G+ Y
Sbjct: 319 CRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNY 378
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 95/207 (45%), Gaps = 3/207 (1%)
Query: 206 VTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLRE 265
++ +V+V + KAG + A +E+ G L+ Y ++ Y R R +L+E
Sbjct: 134 LSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKE 193
Query: 266 MDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQ 325
M++ V Y L+ G S G+ + VF+ I+ + D + +INAY AG
Sbjct: 194 MESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGN 253
Query: 326 SQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCT 385
++A F G+EP+++ +++ K Q+ A L D++ G + T
Sbjct: 254 VRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNT 313
Query: 386 LAAWFKRLGVVE---EVEHVLREYGLR 409
+ + R G+V+ E++ V+ G++
Sbjct: 314 MIDGYCRHGMVDKALEIKAVMERMGIQ 340
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 77/161 (47%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+ E E+N YT +I + K+ + A M+ +G VT VM+ Y K+G+
Sbjct: 369 MTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGS 428
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ AE +E++ G D +Y ++V + G +D L EM + Y A
Sbjct: 429 IREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTA 488
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQ 321
L+ G + G SE A + ++ + AG+TPD + ++L+ +
Sbjct: 489 LISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLVGSLH 529
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 92/233 (39%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ Y ++ L M+ G T T++V S AG++ E F+EIK
Sbjct: 171 YNPLLDTYTRQKNDARVAEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIK 230
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
D Y +++ AY RAG + R + E + Y AL+ G+ G E
Sbjct: 231 RKNVAGDVYFYSAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIE 290
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ + +Q G+ + + +I+ Y G KA M + G++ +
Sbjct: 291 AAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLA 350
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ N++ A + L + +G + TL + + G + E + R+
Sbjct: 351 CGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRD 403
>gi|242095042|ref|XP_002438011.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
gi|241916234|gb|EER89378.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
Length = 1443
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 101/212 (47%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L+E+ F + Y +++ + K+ + E+T + + GF +++T M+ MY K G
Sbjct: 354 LVEKGFMPDAVTYNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNEITYNTMIHMYGKMGR 413
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L +A ++E++ +G D +Y M+ + + + +L +M + + A
Sbjct: 414 LDLAVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIAEAGKVLEDMADAGLKPTLVAFSA 473
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ Y+ G A++ F+ + +G+ PD ++++ + +G+++K ++ M
Sbjct: 474 LICAYAKGGRRADAEKTFDCMIASGVKPDRLAYLVMLDVFARSGETEKMLRLYRTMMNDN 533
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLE 372
P D ++L A KE++ E + D+E
Sbjct: 534 YRPDDDMYQVLLVALAKEDKCEEIEEIIQDME 565
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 98/236 (41%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ +G+ + + AE + +GF+ D VT ++ ++K GN+ E T EE+
Sbjct: 331 YNAMVSVHGRCGKAEEAERLFGELVEKGFMPDAVTYNSLLYAFAKEGNVDKVEHTCEELV 390
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G ++ +Y +M+ Y + G LD L EM A + Y ++
Sbjct: 391 KAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIA 450
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +V E + AG+ P + LI AY G+ A F M +G++P ++L
Sbjct: 451 EAGKVLEDMADAGLKPTLVAFSALICAYAKGGRRADAEKTFDCMIASGVKPDRLAYLVML 510
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGL 408
+ + + L + D + + L + EE+E ++++ L
Sbjct: 511 DVFARSGETEKMLRLYRTMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEIIQDMEL 566
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/210 (19%), Positives = 93/210 (44%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F+ ++ + +++ Y ++ G D+ T ++VMY ++ +
Sbjct: 916 FKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTLIVMYCRSLRPEEGF 975
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
E+ G +SY S++ A +A + ++ + L EM ++ + +Y +++ Y
Sbjct: 976 TLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQLFEEMRSKSYQLNRSIYHMMMKIY 1035
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
GN A+ + ++ GI P +L+ +Y AGQ +A +++ + LE S
Sbjct: 1036 RNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPHEAENVLNSLKSSSLEVST 1095
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDG 375
+ + A K + ++ L++++RDG
Sbjct: 1096 LPYSTVFDAYLKNGDYDLGIKKLLEMKRDG 1125
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 80/180 (44%), Gaps = 2/180 (1%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK--MAE 225
A ++ + ++ Y + + +A L M RG D V+ ++ SK+G L +A
Sbjct: 219 ATVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVAL 278
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+ E++ G D +Y +++ A ++ L+ + EM A E Y A++ +
Sbjct: 279 DLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVH 338
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
G +E A+R+F + G PDA L+ A+ G K + + KAG + ++
Sbjct: 339 GRCGKAEEAERLFGELVEKGFMPDAVTYNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNE 398
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 95/218 (43%), Gaps = 3/218 (1%)
Query: 201 FICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGE 260
F + T+ +M+ ++KAG++ + + +K G + Y SM E
Sbjct: 846 FKISKSTVLLMLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMTSLLCHHNRFRDVE 905
Query: 261 VLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAY 320
+++ EM+ ++ +LL Y+ GN + +V+++I AG+ PD LI Y
Sbjct: 906 LMIAEMEGAGFKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTLIVMY 965
Query: 321 QMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGK 380
+ + ++ +T M K GL P + +L+A K +A + ++ + + +
Sbjct: 966 CRSLRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQLFEEMRSKSYQLNR 1025
Query: 381 EASCTLAAWFKRLGVVEEVEH---VLREYGLRETYSKI 415
+ ++ G + E+ V++E G+ T + +
Sbjct: 1026 SIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATM 1063
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 98/238 (41%), Gaps = 3/238 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y +I + +++A M D T MV ++ + G + AE F
Sbjct: 292 DVITYNTLISACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVHGRCGKAEEAERLF 351
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E+ G D +Y S++ A+ + G +D+ E E+ Y ++ Y
Sbjct: 352 GELVEKGFMPDAVTYNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNEITYNTMIHMYGKM 411
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A +++ ++ G TPDA ++I++ + +A ++M AGL+P+
Sbjct: 412 GRLDLAVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIAEAGKVLEDMADAGLKPTLVAF 471
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREY 406
+ ++ A K + A + + G + A + F R G E E +LR Y
Sbjct: 472 SALICAYAKGGRRADAEKTFDCMIASGVKPDRLAYLVMLDVFARSG---ETEKMLRLY 526
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 85/217 (39%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
++LE E + Y +I Y + ++ + L M +RG + ++ +KA
Sbjct: 945 SILEAGLEPDEDTYNTLIVMYCRSLRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAE 1004
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ A++ FEE++ L++ Y M+ Y AG + E LL M +
Sbjct: 1005 LREQADQLFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMH 1064
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ Y G A+ V +++ + + + + +AY G M++
Sbjct: 1065 ILMTSYGTAGQPHEAENVLNSLKSSSLEVSTLPYSTVFDAYLKNGDYDLGIKKLLEMKRD 1124
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
G+EP + + A Q A+ L L+ GF
Sbjct: 1125 GVEPDHQVWTCFIRAASLCEQTADAILLLKSLQDCGF 1161
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 33/174 (18%), Positives = 75/174 (43%), Gaps = 2/174 (1%)
Query: 170 IRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFE 229
++ Y ++ K + A+ M+ + + ++ +M+ +Y AGN AE
Sbjct: 990 LQSYKSLLAASAKAELREQADQLFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLA 1049
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
+K G + ++ +Y AG E +L + + + V + Y + Y NG
Sbjct: 1050 VMKEDGIEPTIATMHILMTSYGTAGQPHEAENVLNSLKSSSLEVSTLPYSTVFDAYLKNG 1109
Query: 290 NSE-GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
+ + G +++ E ++ G+ PD ++ I A + Q+ A ++++ G +
Sbjct: 1110 DYDLGIKKLLE-MKRDGVEPDHQVWTCFIRAASLCEQTADAILLLKSLQDCGFD 1162
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 43/216 (19%), Positives = 80/216 (37%), Gaps = 37/216 (17%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
II YG Q AE + +++ I D+ ++ Y+++G + A F+ + G
Sbjct: 752 IIEAYGNIKLWQQAEILVKGLRQASGI-DRRIWNALIHAYAESGLYEKARAVFDNMIKTG 810
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
S M+ A + G LD V++ E+ + + +L ++ G+
Sbjct: 811 PLPTVDSVNGMMRALIVDGRLDELYVVVGELQDMDFKISKSTVLLMLDAFAKAGDVFEVM 870
Query: 296 RVFEAIQFAG-----------------------------------ITPDARMCALLINAY 320
+++ ++ AG PD + L+N Y
Sbjct: 871 KIYNGMKAAGYLPNMHLYRSMTSLLCHHNRFRDVELMIAEMEGAGFKPDLSIFNSLLNMY 930
Query: 321 QMAGQSQKAYTAFQNMRKAGLEPS-DKCVALILSAC 355
AG + +Q++ +AGLEP D LI+ C
Sbjct: 931 TAAGNFDRTTQVYQSILEAGLEPDEDTYNTLIVMYC 966
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 97/209 (46%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ +T +IH K ++ A + M+ RG ++VT T ++ + K G L A
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
EE++ G Y +++ Y + G +D L+REM+A+ V Y ++ GY
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKV 411
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
GN + A ++ + + G+ PDA + LI + A F+NM + G++P +
Sbjct: 412 GNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTY 471
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFM 377
++ KE + +AL ++ R G +
Sbjct: 472 TTLIDGHCKEGNVEKALSLHDEMIRKGVL 500
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 105/238 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ E ++ Y ++ GY K + + M +RG + D VT T ++ KAGN
Sbjct: 249 MVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGN 308
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ A +++ G +++ ++ +++ + + G LD + + EM + Y A
Sbjct: 309 LEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNA 368
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ GY G + A+ + ++ + PD + +I+ Y G A+ Q M K G
Sbjct: 369 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 428
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
+ P + ++ +E +LN A E ++ + G + TL + G VE+
Sbjct: 429 VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEK 486
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 91/213 (42%)
Query: 155 QVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
+V L E + + N+ + +++G K +++ A M R G D V+ ++
Sbjct: 208 RVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSG 267
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
Y K G L + F E+ G D ++ S++ A +AG L++ L+ +M + + +
Sbjct: 268 YCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMN 327
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+ AL+ G+ G + A E ++ GI P LIN Y G+ A +
Sbjct: 328 EVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIR 387
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
M ++P + I+S K L+ A +
Sbjct: 388 EMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQL 420
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 88/209 (42%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E N +T +I G+ KK + +A + M++ G V ++ Y K G +
Sbjct: 321 ERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMD 380
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
+A E E++ D +Y +++ Y + G LD L ++M + V + Y +L+
Sbjct: 381 LARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLI 440
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
RG A +FE + G+ PD LI+ + G +KA + M + G+
Sbjct: 441 RGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVL 500
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDL 371
P +++++ K + A L L
Sbjct: 501 PDVVTYSVLINGLSKSARTKEAHRLLFKL 529
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 90/205 (43%), Gaps = 1/205 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFI-CDQVTLTVMVVMYSKAGNLKMAEET 227
N Y ++ + + ++ AE + M+ G + VT MV KAG ++ A +
Sbjct: 186 NAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKV 245
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
F+E+ G D SY +++ Y + G L + EM + + + +L+
Sbjct: 246 FDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCK 305
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
GN E A + ++ G+ + LI+ + G A A + MRK G++PS C
Sbjct: 306 AGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVC 365
Query: 348 VALILSACEKENQLNRALEFLIDLE 372
+++ K +++ A E + ++E
Sbjct: 366 YNALINGYCKLGRMDLARELIREME 390
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 104/250 (41%), Gaps = 7/250 (2%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
++L N+ Y ++ + +++ A + M+ G + VT +V + +AG
Sbjct: 142 SMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAG 201
Query: 220 NLKMAEETFEEIKLLGEPLDKR----SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
L AE + L+ E + + ++ SMV +AG ++ + EM + +
Sbjct: 202 ELDGAERV---VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDV 258
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
Y LL GY G + VF + G+ PD LI+A AG ++A
Sbjct: 259 VSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQ 318
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGV 395
MR+ GL ++ ++ K+ L+ AL + ++ + G L + +LG
Sbjct: 319 MRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGR 378
Query: 396 VEEVEHVLRE 405
++ ++RE
Sbjct: 379 MDLARELIRE 388
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/252 (19%), Positives = 105/252 (41%), Gaps = 15/252 (5%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y+ II GY K + +A M ++G + D +T + ++ + L A E F
Sbjct: 397 DVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELF 456
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E + LG D+ +Y +++ + + G +++ L EM + V Y L+ G S +
Sbjct: 457 ENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKS 516
Query: 289 GNSEGAQRVFEAIQFAGITPDA---------------RMCALLINAYQMAGQSQKAYTAF 333
++ A R+ + PD + L+ + M G ++A +
Sbjct: 517 ARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVY 576
Query: 334 QNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRL 393
Q+M + ++++ + + +AL F + R GF ++ +L
Sbjct: 577 QSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEE 636
Query: 394 GVVEEVEHVLRE 405
G+V E ++ +++
Sbjct: 637 GMVVEADNAIQD 648
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 98/197 (49%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y +++ + +I+ A + L+ M+ +G I D V+ T ++ Y G L+ +
Sbjct: 109 NTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLV 168
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E++L G + +Y S+++ ++G + GE +LREM + V+ +Y L+ G+
Sbjct: 169 KEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKL 228
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
GN++ A ++F ++ I PD+ + LI +G+ +A F M K G EP +
Sbjct: 229 GNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTY 288
Query: 349 ALILSACEKENQLNRAL 365
++ K ++ +A
Sbjct: 289 TALIDGYCKLGEMKKAF 305
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 108/252 (42%), Gaps = 3/252 (1%)
Query: 157 AELALLEESFEANIRD---YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVV 213
A L+ F+ I D YT II GY ++Q + M+ +G + T + +++
Sbjct: 129 AHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIIL 188
Query: 214 MYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYV 273
+ K+G + E+ E+ G D Y +++ + + G L EM+A+E+
Sbjct: 189 LLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVP 248
Query: 274 GSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAF 333
S + AL+ G S +G A ++F + G PD LI+ Y G+ +KA+
Sbjct: 249 DSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLH 308
Query: 334 QNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRL 393
M + GL P+ + K +L+ A E L ++ R G + T+ +
Sbjct: 309 NQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKA 368
Query: 394 GVVEEVEHVLRE 405
G + + ++ E
Sbjct: 369 GNILQAVKLMEE 380
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 81/172 (47%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
++ +I G ++ A+ M ++GF D+VT T ++ Y K G +K A ++
Sbjct: 253 FSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMV 312
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+G + +Y ++ ++G LD LL EM + + + Y ++ G GN
Sbjct: 313 QIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNIL 372
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A ++ E ++ AG+ PD L++AY G+ KA + M GL+P+
Sbjct: 373 QAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPT 424
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 87/192 (45%), Gaps = 1/192 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ YT + G K ++ A L M R+G + T +V KAGN+ A +
Sbjct: 319 NVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLM 378
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
EE+K G D +Y +++ AY + G + + LLREM + + + L+ G M+
Sbjct: 379 EEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMS 438
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP-SDKC 347
G E +R+ + + GI P+A ++ Y + + + ++ M G+ P S+
Sbjct: 439 GKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTY 498
Query: 348 VALILSACEKEN 359
LI C+ N
Sbjct: 499 NILIKGHCKARN 510
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 100/242 (41%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ + N+ Y+ II K ++ E L M +RG D V T ++ + K GN +
Sbjct: 174 KGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQA 233
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A + F E++ D ++ +++ +G + + L EM + Y AL+
Sbjct: 234 AYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALID 293
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
GY G + A + + G+TP+ L + +G+ A M + GL+
Sbjct: 294 GYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQL 353
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+ I++ K + +A++ + +++ G TL + + G + + +L
Sbjct: 354 NISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELL 413
Query: 404 RE 405
RE
Sbjct: 414 RE 415
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 82/184 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++++ FE + YT +I GY K +++ A M + G + VT T + K+G
Sbjct: 276 MIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGE 335
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A E E+ G L+ +Y ++V +AG + + L+ EM ++ + Y
Sbjct: 336 LDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTT 395
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ Y G A+ + + G+ P +L+N M+G+ + + M + G
Sbjct: 396 LMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKG 455
Query: 341 LEPS 344
+ P+
Sbjct: 456 IMPN 459
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/158 (17%), Positives = 72/158 (45%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L+ + + + +++G ++++ E L M +G + + T ++ Y N
Sbjct: 416 MLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNN 475
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++++ E + + G D +Y ++ + +A + L +EM + + + Y A
Sbjct: 476 MRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNA 535
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLIN 318
L++G+ A+++FE ++ G+ A + L ++
Sbjct: 536 LIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVD 573
>gi|242094172|ref|XP_002437576.1| hypothetical protein SORBIDRAFT_10g029640 [Sorghum bicolor]
gi|241915799|gb|EER88943.1| hypothetical protein SORBIDRAFT_10g029640 [Sorghum bicolor]
Length = 429
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 113/246 (45%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
L + ++ N R YT ++ Y + +++++ L M+RRG D +++V +Y
Sbjct: 69 LQMADDGVARNRRTYTLLLGAYARAGRLEDSWWVLGEMRRRGIRLDTAGYSMLVRLYRDN 128
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
G K A + E++ +G LD + Y ++ + + G L + +M A+ + +
Sbjct: 129 GMWKKAIDLVMEMQEVGVELDVKIYSGLIDTFGKYGQLADARRVFDKMRAEGIKPDISTW 188
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
AL++ + GN + A R F ++Q G+ PD ++ ++I+ G+ + F M+
Sbjct: 189 NALIQWHCRVGNMKRALRFFTSMQEEGMYPDPKIFVMIISRLGEQGKWDEIKKLFDGMKN 248
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
G + S A+++ + A E + L + + C LA + + G+ E+
Sbjct: 249 RGFKESGAVYAVLVDIYGQYGHFRDARECIAALRAENMQLSPRVFCVLANAYAQQGLCEQ 308
Query: 399 VEHVLR 404
+VL+
Sbjct: 309 TVNVLQ 314
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 91/198 (45%), Gaps = 3/198 (1%)
Query: 190 ENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMA 249
+ LL M G ++ T T+++ Y++AG L+ + E++ G LD Y +V
Sbjct: 65 DRLLLQMADDGVARNRRTYTLLLGAYARAGRLEDSWWVLGEMRRRGIRLDTAGYSMLVRL 124
Query: 250 YVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPD 309
Y GM + L+ EM V + ++Y L+ + G A+RVF+ ++ GI PD
Sbjct: 125 YRDNGMWKKAIDLVMEMQEVGVELDVKIYSGLIDTFGKYGQLADARRVFDKMRAEGIKPD 184
Query: 310 ARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLI 369
LI + G ++A F +M++ G+ P K +I+S ++ + + +
Sbjct: 185 ISTWNALIQWHCRVGNMKRALRFFTSMQEEGMYPDPKIFVMIISRLGEQGKWDEIKKLFD 244
Query: 370 DLERDGFMVGKEASCTLA 387
++ GF KE+ A
Sbjct: 245 GMKNRGF---KESGAVYA 259
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 99/247 (40%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
+ + E E +++ Y+ +I +GK Q+ +A M+ G D T ++ + +
Sbjct: 139 MEMQEVGVELDVKIYSGLIDTFGKYGQLADARRVFDKMRAEGIKPDISTWNALIQWHCRV 198
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
GN+K A F ++ G D + + ++ G D + L M + VY
Sbjct: 199 GNMKRALRFFTSMQEEGMYPDPKIFVMIISRLGEQGKWDEIKKLFDGMKNRGFKESGAVY 258
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
L+ Y G+ A+ A++ + R+ +L NAY G ++ Q M +
Sbjct: 259 AVLVDIYGQYGHFRDARECIAALRAENMQLSPRVFCVLANAYAQQGLCEQTVNVLQLMEE 318
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
G EP+ + L+++A + AL ++ G TL F R E+
Sbjct: 319 EGFEPNLVMLNLLINAFGTAGRHLEALAVFQHIKDSGMSPDVVTYTTLMKTFMRAKKFEK 378
Query: 399 VEHVLRE 405
V V RE
Sbjct: 379 VSEVYRE 385
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 84/195 (43%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
++ EE + + + II G++ + + MK RGF V+V +Y + G
Sbjct: 210 SMQEEGMYPDPKIFVMIISRLGEQGKWDEIKKLFDGMKNRGFKESGAVYAVLVDIYGQYG 269
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ + A E ++ L R + + AY + G+ ++ +L+ M+ + +
Sbjct: 270 HFRDARECIAALRAENMQLSPRVFCVLANAYAQQGLCEQTVNVLQLMEEEGFEPNLVMLN 329
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ + G A VF+ I+ +G++PD L+ + A + +K ++ M +A
Sbjct: 330 LLINAFGTAGRHLEALAVFQHIKDSGMSPDVVTYTTLMKTFMRAKKFEKVSEVYREMERA 389
Query: 340 GLEPSDKCVALILSA 354
G P K ++ A
Sbjct: 390 GCTPDRKAREMLHDA 404
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 91/202 (45%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ E N+ Y +I+G ++ +++ L M RRG+ D+VT ++ Y K GN
Sbjct: 269 KGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQ 328
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A E+ G +Y S++ + +AG ++R L +M + + Y L+
Sbjct: 329 ALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVD 388
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G+S G A RV + G +P LIN + + G+ + A ++M++ GL P
Sbjct: 389 GFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSP 448
Query: 344 SDKCVALILSACEKENQLNRAL 365
+ +LS + ++ AL
Sbjct: 449 DVVSYSTVLSGFCRSYDVDEAL 470
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N R YT ++ G+ +K + A L M GF VT ++ + G ++ A
Sbjct: 379 NERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVL 438
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++K G D SY +++ + R+ +D + REM + + + Y +L++G+
Sbjct: 439 EDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQ 498
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
++ A ++E + G+ PD LINAY M G +KA M + G+ P
Sbjct: 499 RRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTY 558
Query: 349 ALILSACEKENQLNRALEFLIDL 371
+++++ K+++ A L+ L
Sbjct: 559 SVLINGLNKQSRTREAKRLLLKL 581
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 98/237 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I GY K +I + L +M +G + ++ V++ + G +K
Sbjct: 239 NVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVL 298
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E+ G LD+ +Y +++ Y + G + V+ EM + Y +L+
Sbjct: 299 TEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKA 358
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
GN A + ++ G+ P+ R L++ + G +AY + M G PS
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+++ ++ A+ L D++ G + T+ + F R V+E V RE
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKRE 475
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 88/186 (47%), Gaps = 1/186 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I GY K+ A M R G +T T ++ KAGN+ A E ++++
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ G ++R+Y ++V + + G ++ +LREM+ Y AL+ G+ + G E
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV-ALI 351
A V E ++ G++PD + +++ + + +A + M + G++P +LI
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Query: 352 LSACEK 357
CE+
Sbjct: 493 QGFCEQ 498
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 93/224 (41%), Gaps = 2/224 (0%)
Query: 183 KMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRS 242
K I AEN M + T +++ + AGN+ +A F++++ G + +
Sbjct: 183 KRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVT 242
Query: 243 YGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQ 302
Y +++ Y + +D G LLR M + + Y ++ G G + V +
Sbjct: 243 YNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMN 302
Query: 303 FAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS-DKCVALILSACEKENQL 361
G + D LI Y G +A M + GL PS +LI S C+ N +
Sbjct: 303 RRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGN-M 361
Query: 362 NRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
NRA+EFL + G + TL F + G + E VLRE
Sbjct: 362 NRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLRE 405
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 88/216 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+LE N+ Y +I G+ I A M+ +G + + VT ++ Y K
Sbjct: 196 MLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK 255
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ + + L G + SY ++ R G + +L EM+ + + Y
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNT 315
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L++GY GN A + + G+TP LI++ AG +A MR G
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG 375
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
L P+++ ++ ++ +N A L ++ +GF
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGF 411
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 111/260 (42%), Gaps = 15/260 (5%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E+ + + Y+ +I G+ ++ + + A + M R G D+ T T ++ Y G+
Sbjct: 476 MVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGD 535
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK- 279
L+ A + E+ G D +Y ++ + + LL ++ +E Y
Sbjct: 536 LEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHT 595
Query: 280 --------------ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQ 325
+L++G+ M G A +VFE++ PD ++I+ + AG
Sbjct: 596 LIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGD 655
Query: 326 SQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCT 385
+KAYT ++ M K+G V ++ A KE ++N ++ + R + E +
Sbjct: 656 IRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKV 715
Query: 386 LAAWFKRLGVVEEVEHVLRE 405
L R G ++ V VL E
Sbjct: 716 LVEINHREGNMDVVLDVLAE 735
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 95/222 (42%)
Query: 156 VAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
V +L ++ YT +IH K + A L M+ RG ++ T T +V +
Sbjct: 331 VMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGF 390
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
S+ G + A E+ G +Y +++ + G ++ +L +M + +
Sbjct: 391 SQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDV 450
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
Y +L G+ + + + A RV + GI PD + LI + ++++A ++
Sbjct: 451 VSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEE 510
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
M + GL P + +++A E L +AL+ ++ G +
Sbjct: 511 MLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552
>gi|297736301|emb|CBI24939.3| unnamed protein product [Vitis vinifera]
Length = 485
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 118/277 (42%), Gaps = 4/277 (1%)
Query: 132 KPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAEN 191
+PR + +L L + P + +L E + YT ++ YG Q+ A
Sbjct: 125 EPRCQTYTKLLMMLGKCKQPEQASLLFEVMLSEGLRPTLDVYTALVSAYGHSGQLDKAFC 184
Query: 192 TLLAMKRRGFIC--DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMA 249
T+ MK C D T ++++ + G + E F E+ LG +Y +++
Sbjct: 185 TVEDMKSVS-DCKPDVYTYSILIKCCTTLGRFDLIERIFTEMSYLGIECSTVTYNTIIDG 243
Query: 250 YVRAGMLDRGEVLLREM-DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITP 308
Y +A M + E L EM ++ + + Y +G E ++ ++ Q GI P
Sbjct: 244 YGKADMFELMESSLTEMIESGTCLPDIFTLNSFIWAYGNSGQIEKMEKWYDEFQLMGIRP 303
Query: 309 DARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFL 368
D + +LI +Y A +K + + M+K P+ +++ + + + EF
Sbjct: 304 DIKTFNILIRSYGKACMYEKMVSVMEFMKKRFYSPTIVTFNIVIEMFGRVGNIEKMEEFF 363
Query: 369 IDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ ++ G C+L + + + G +++V+ +LR+
Sbjct: 364 LKMKHQGVKPNSITYCSLVSAYSKAGYLKKVDSILRQ 400
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 83/168 (49%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I+ + +I YGK + + + MK+R + VT +++ M+ + GN++ EE F
Sbjct: 304 DIKTFNILIRSYGKACMYEKMVSVMEFMKKRFYSPTIVTFNIVIEMFGRVGNIEKMEEFF 363
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++K G + +Y S+V AY +AG L + + +LR+++ +V + + + +L Y
Sbjct: 364 LKMKHQGVKPNSITYCSLVSAYSKAGYLKKVDSILRQIENSDVTLDTPFFNCVLSAYGQA 423
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
G+ E +F ++ PD A +I AY G + A NM
Sbjct: 424 GDVERMGELFLVMKERKCKPDNITFATMIQAYNAQGMIEAAQNLEVNM 471
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 98/221 (44%), Gaps = 13/221 (5%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGF-ICDQVTLTVMVVMYSKAGNLKMAE 225
E + Y II GYGK + E++L M G + D TL + Y +G ++ E
Sbjct: 231 ECSTVTYNTIIDGYGKADMFELMESSLTEMIESGTCLPDIFTLNSFIWAYGNSGQIEKME 290
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+ ++E +L+G D +++ ++ +Y +A M ++ ++ M + + ++ +
Sbjct: 291 KWYDEFQLMGIRPDIKTFNILIRSYGKACMYEKMVSVMEFMKKRFYSPTIVTFNIVIEMF 350
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
GN E + F ++ G+ P++ L++AY AG +K + + + + +
Sbjct: 351 GRVGNIEKMEEFFLKMKHQGVKPNSITYCSLVSAYSKAGYLKKVDSILRQIENSDVTLDT 410
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDG--FMVGKEASC 384
+LSA + D+ER G F+V KE C
Sbjct: 411 PFFNCVLSAYGQAG----------DVERMGELFLVMKERKC 441
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 61/132 (46%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
+ I + +I +G+ I+ E L MK +G + +T +V YSKAG LK +
Sbjct: 336 YSPTIVTFNIVIEMFGRVGNIEKMEEFFLKMKHQGVKPNSITYCSLVSAYSKAGYLKKVD 395
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+I+ LD + ++ AY +AG ++R L M ++ + + +++ Y
Sbjct: 396 SILRQIENSDVTLDTPFFNCVLSAYGQAGDVERMGELFLVMKERKCKPDNITFATMIQAY 455
Query: 286 SMNGNSEGAQRV 297
+ G E AQ +
Sbjct: 456 NAQGMIEAAQNL 467
>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
Length = 1351
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 127/291 (43%), Gaps = 25/291 (8%)
Query: 87 EQKQAISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLK 146
+QK+A+ ++ K+ K+F VS +TG+ + L+ V + L
Sbjct: 811 KQKKALEA--HELVKKFKSF-----GVSLKTGSYNSLICGLVD-------------ENLI 850
Query: 147 LMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQV 206
+ L+ ++ EL + F N+ ++ GK M+I+ M R+G+ V
Sbjct: 851 DIAEGLFAEMKELGCGPDEFTYNL-----LLDAMGKSMRIEEMLKVQEEMHRKGYESTYV 905
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
T ++ K+ L+ A + + + G +YG ++ ++AG ++ E L EM
Sbjct: 906 TYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEM 965
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
+Y LL G+ + GN+E +F+ + GI PD + ++I+ AGQ
Sbjct: 966 LEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQL 1025
Query: 327 QKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
T F+ + + GLEP L++ K +L A+ ++++ G +
Sbjct: 1026 NDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIV 1076
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 131/307 (42%), Gaps = 19/307 (6%)
Query: 109 QIICVSPETGNLSDLLAAWVRF----MKPRRADWLAVLKQLKLMEHPLYLQVAEL--ALL 162
Q++C + G +SD + + KP R ++ +L K ++ V E+ A+
Sbjct: 352 QVLC---DAGRISDAKDVFWKMKKSDQKPDRVTYITLLD--KFADNGESQSVMEIWNAMK 406
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+ + N+ YT +I + ++ A MK++G + +Q + ++ + KA
Sbjct: 407 ADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFG 466
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG----MLDRGEVLLREMDAQEVYVGSEVY 278
A E F+ + + G + ++ + Y ++G + R E++ + +V G+
Sbjct: 467 DALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGN--- 523
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
A+L G + +G A+RVF ++ G++PD ++I A + +A F +M +
Sbjct: 524 -AVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIE 582
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
P V ++ K + + A + L+ TL A R G V+E
Sbjct: 583 NNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKE 642
Query: 399 VEHVLRE 405
V H+L E
Sbjct: 643 VMHLLEE 649
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 108/284 (38%), Gaps = 42/284 (14%)
Query: 173 YTKI--IHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
YT + I+ YGK + A MK +G + D V ++ +K+G L MA+ F E
Sbjct: 485 YTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHE 544
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
+K +G D +Y M+ +A D + +M V +L+ G
Sbjct: 545 LKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGR 604
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
+ A ++F ++ + P L+ G+ ++ + M + P+
Sbjct: 605 GDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNT 664
Query: 351 ILSACEKENQLNRALEFLIDLERDG---------------------------------FM 377
IL K +N AL+ L + G +
Sbjct: 665 ILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVL 724
Query: 378 VGKEAS-CTLAAWFKRLGVVEEVEHVLREYGLRETYSKIPGSRS 420
+ A+ CT+ F ++G+++E H+++EY L+ PGS++
Sbjct: 725 IPDYATLCTILPSFVKIGLMKEALHIIKEYFLQ------PGSKT 762
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 88/210 (41%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
+AN+ + I G G + +++A L MK G + + T +V K+G + A E
Sbjct: 201 KANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALE 260
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
++ + + G R+Y +++A+ + ++ LLREM+A V Y +R
Sbjct: 261 VYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLG 320
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
+ A R+ ++ G PD +LI AG+ A F M+K+ +P
Sbjct: 321 QARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRV 380
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGF 376
+L + +E ++ DG+
Sbjct: 381 TYITLLDKFADNGESQSVMEIWNAMKADGY 410
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 70/155 (45%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++++ +I+ YT II K Q+ + + G D +T +++ K+
Sbjct: 1000 MVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKR 1059
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ A F E++ G + +Y S+++ +AG + E+ + Y A
Sbjct: 1060 LEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNA 1119
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
L+RGYS++G+++ A + + G P++ C +
Sbjct: 1120 LIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTCHI 1154
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 78/184 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L+ + F Y ++ G K +I++AEN M G + +++ + AGN
Sbjct: 930 LMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGN 989
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ F+++ G D +SY ++ +AG L+ G R++ + Y
Sbjct: 990 TEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNL 1049
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G + E A +F +Q GI P+ LI AG++ +A ++ + G
Sbjct: 1050 LIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKG 1109
Query: 341 LEPS 344
+P+
Sbjct: 1110 WKPN 1113
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 88/212 (41%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
E + ++ +T +I +I +A++ MK+ D+VT ++ ++ G +
Sbjct: 338 EGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQS 397
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
E + +K G + +Y +++ A + G + + EM + + Y +L+
Sbjct: 398 VMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLIS 457
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G+ A +F+ + G P+ L IN Y +G+S KA ++ M+ G+ P
Sbjct: 458 GFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVP 517
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDG 375
+L K +L A +L+ G
Sbjct: 518 DVVAGNAVLFGLAKSGRLGMAKRVFHELKAMG 549
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 37/200 (18%), Positives = 83/200 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++R Y+ ++ +GK+ ++ L M+ G + + T+ + + +A A
Sbjct: 273 SVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRIL 332
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++ G D ++ ++ AG + + + +M + Y LL ++ N
Sbjct: 333 AEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADN 392
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G S+ ++ A++ G + +I+A G+ +A F M++ G+ P
Sbjct: 393 GESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSY 452
Query: 349 ALILSACEKENQLNRALEFL 368
++S K ++ ALE
Sbjct: 453 NSLISGFLKADRFGDALELF 472
>gi|255577248|ref|XP_002529506.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531022|gb|EEF32875.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 808
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 102/244 (41%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+L E I Y +I Y + A + +K G + D V+ T ++ Y ++
Sbjct: 345 TMLAEGLTPTIVSYNALIGAYAFHGMSEEALSVFKKIKASGLLPDVVSYTSLLSSYGRSK 404
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
K A E F +K + S+ +++ AY G+L +LREM+ ++
Sbjct: 405 QPKKAREMFNMMKKAKLKPNVVSFNALIDAYGSNGLLADAVKVLREMEQDGIHPNIVTIC 464
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
LL G V A + GI + C I +Y G+ +KA + +MRK
Sbjct: 465 TLLAACGRCGQKVNIDAVLSAAKMRGIKLNTVACNSAIGSYMNVGEYEKAVALYNSMRKM 524
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEV 399
+ P+ +++S C K ++ +A+EF D+ + KE ++ + + G + E
Sbjct: 525 KVAPNSVTYTVLISGCCKMSKYGKAIEFFADMMELKIALTKEVCSSVICAYSKQGQITEA 584
Query: 400 EHVL 403
E +
Sbjct: 585 ESIF 588
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 110/252 (43%), Gaps = 4/252 (1%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+ E ++ + ++ Y Q A + MK D T +++ K G
Sbjct: 239 MTENGVGPDLVTHNIVLSAYKTGAQYSKALSYFELMKGTNIRPDTTTRNIVIYCLVKLGQ 298
Query: 221 LKMAEETFE---EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
+ A + F E + P D ++ S++ Y +G ++ + + M A+ +
Sbjct: 299 CEKAIDIFNSMREKRAECRP-DIVTFTSIIHLYSLSGQVENCKAVFSTMLAEGLTPTIVS 357
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y AL+ Y+ +G SE A VF+ I+ +G+ PD L+++Y + Q +KA F M+
Sbjct: 358 YNALIGAYAFHGMSEEALSVFKKIKASGLLPDVVSYTSLLSSYGRSKQPKKAREMFNMMK 417
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
KA L+P+ ++ A L A++ L ++E+DG CTL A R G
Sbjct: 418 KAKLKPNVVSFNALIDAYGSNGLLADAVKVLREMEQDGIHPNIVTICTLLAACGRCGQKV 477
Query: 398 EVEHVLREYGLR 409
++ VL +R
Sbjct: 478 NIDAVLSAAKMR 489
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 123/308 (39%), Gaps = 24/308 (7%)
Query: 115 PETGNLSDLLAAWVRFMKPRRA-DWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDY 173
P+ + + LL+++ R +P++A + ++K+ KL + N+ +
Sbjct: 388 PDVVSYTSLLSSYGRSKQPKKAREMFNMMKKAKL-------------------KPNVVSF 428
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKL 233
+I YG + +A L M++ G + VT+ ++ + G + K+
Sbjct: 429 NALIDAYGSNGLLADAVKVLREMEQDGIHPNIVTICTLLAACGRCGQKVNIDAVLSAAKM 488
Query: 234 LGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEG 293
G L+ + S + +Y+ G ++ L M +V S Y L+ G
Sbjct: 489 RGIKLNTVACNSAIGSYMNVGEYEKAVALYNSMRKMKVAPNSVTYTVLISGCCKMSKYGK 548
Query: 294 AQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILS 353
A F + I +C+ +I AY GQ +A + F M+ AG P +L
Sbjct: 549 AIEFFADMMELKIALTKEVCSSVICAYSKQGQITEAESIFTMMKMAGCCPDIITFTAMLH 608
Query: 354 ACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRETYS 413
A +A + + ++E + A L F + G +V +L E+ ++E
Sbjct: 609 AYNAGEHWGKACDLIQEMEDYDIQLDTIACSALMRAFNKRGNPSQV-LILAEF-MKE--K 664
Query: 414 KIPGSRSI 421
+IP S +I
Sbjct: 665 EIPFSDAI 672
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/199 (17%), Positives = 88/199 (44%), Gaps = 1/199 (0%)
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTL-TVMVVMYSKAGNLKMAEETFE 229
+++ ++I ++ ++++ MK + C + + +M+ ++++ A F
Sbjct: 108 KNFPRLIKEITQRGALEHSNLVFRWMKLQKNYCARTDMYNMMIRLHARHNLTDQARGLFF 167
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
E++ D +Y +++ A+ RAG ++ +M + + Y L+ +G
Sbjct: 168 EMQEWRCKPDSETYNALINAHGRAGQWRWAMNIMEDMLREAIPPSRSTYNNLINACGSSG 227
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
N A +V + + G+ PD ++++AY+ Q KA + F+ M+ + P
Sbjct: 228 NWREALKVSKQMTENGVGPDLVTHNIVLSAYKTGAQYSKALSYFELMKGTNIRPDTTTRN 287
Query: 350 LILSACEKENQLNRALEFL 368
+++ K Q +A++
Sbjct: 288 IVIYCLVKLGQCEKAIDIF 306
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 66/137 (48%), Gaps = 1/137 (0%)
Query: 240 KRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG-SEVYKALLRGYSMNGNSEGAQRVF 298
++++ ++ + G L+ ++ R M Q+ Y +++Y ++R ++ + ++ A+ +F
Sbjct: 107 RKNFPRLIKEITQRGALEHSNLVFRWMKLQKNYCARTDMYNMMIRLHARHNLTDQARGLF 166
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
+Q PD+ LINA+ AGQ + A ++M + + PS +++AC
Sbjct: 167 FEMQEWRCKPDSETYNALINAHGRAGQWRWAMNIMEDMLREAIPPSRSTYNNLINACGSS 226
Query: 359 NQLNRALEFLIDLERDG 375
AL+ + +G
Sbjct: 227 GNWREALKVSKQMTENG 243
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 45/233 (19%), Positives = 91/233 (39%), Gaps = 3/233 (1%)
Query: 107 VKQIICVSPETGNLSDLLAAWV-RFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEES 165
V +I+ ++P+ ++ +L W+ RF + + + Q +EH V L+++
Sbjct: 81 VSKILELNPKYDDVEVVLNHWIGRFARKNFPRLIKEITQRGALEHSNL--VFRWMKLQKN 138
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
+ A Y +I + + A M+ D T ++ + +AG + A
Sbjct: 139 YCARTDMYNMMIRLHARHNLTDQARGLFFEMQEWRCKPDSETYNALINAHGRAGQWRWAM 198
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
E++ P + +Y +++ A +G + ++M V + +L Y
Sbjct: 199 NIMEDMLREAIPPSRSTYNNLINACGSSGNWREALKVSKQMTENGVGPDLVTHNIVLSAY 258
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
A FE ++ I PD ++I GQ +KA F +MR+
Sbjct: 259 KTGAQYSKALSYFELMKGTNIRPDTTTRNIVIYCLVKLGQCEKAIDIFNSMRE 311
>gi|359490053|ref|XP_003634022.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
chloroplastic-like [Vitis vinifera]
gi|297745081|emb|CBI38673.3| unnamed protein product [Vitis vinifera]
Length = 900
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 143/340 (42%), Gaps = 25/340 (7%)
Query: 40 RKPAKWSRSLRSGPALEAIKAEDMGKTQVKDDTSMFTWIQIGPNITEEQKQAISQ-FPRK 98
R P RS+R+ E K+ + ++ D + + IGP ++ E+ AI + R
Sbjct: 96 RDPNSKFRSIRNDNGHEEQKSVNHFDDEI--DVNEYG---IGPELSVERCNAILKGLERC 150
Query: 99 MTKRCKAFVKQIICVSPETGNLSDLLAAWVRFMK--PRRADWLAVLKQLKLMEHPLYLQV 156
+ F + + E G L ++A+ ++ RR DW A + M QV
Sbjct: 151 SDSKTMKFFEWM----RENGKLEGNVSAYNLALRVLGRRGDWDAAETMIWEMNGDSDCQV 206
Query: 157 AELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS 216
N + Y +I+ K+ ++ M G + T +++ +Y
Sbjct: 207 ------------NFQVYNTLIYACYKQGHVELGTKWFRLMLENGVRPNVATFGMVMSLYQ 254
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
K N+ +E F +++ G + +Y +M+ Y R + D+ E ++ + +V + E
Sbjct: 255 KGWNVADSEYAFSQMRSFGITC-QSAYSAMITIYTRMSLYDKAEEVIDFIQEDKVILNLE 313
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
+ LL YS G + A+RV ++Q AG +P+ +LI Y A A F+N+
Sbjct: 314 NWLVLLNAYSQQGKLQEAERVLFSMQNAGFSPNIVAYNMLITGYGKASNMDAAQHIFRNL 373
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+ GLEP + ++ + A + +L+R GF
Sbjct: 374 KNVGLEPDESTYRSMIEGWGRAENYKEAEWYYNELKRLGF 413
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 94/216 (43%), Gaps = 1/216 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L F N ++ YGK + A L ++RG + D ++ ++ Y ++ +
Sbjct: 686 MLLHGFAPNTITLNVMLDVYGKSRLFKKARKVLWLARKRGLV-DVISYNTIIAAYGQSKD 744
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
LK T +++ G + Y M+ +Y + G ++ +LR M Y
Sbjct: 745 LKKMLSTVRQMQFNGFSVSLEVYNCMLDSYGKEGQIESFRSVLRRMKESSCASDHYTYNI 804
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ Y G E V ++ +G+ PD LI AY +AG + A + MR+ G
Sbjct: 805 MINIYGEQGWIEEVANVLTELKESGLGPDLCSYNTLIKAYGIAGMVEDAVVLVKEMRENG 864
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
++P +++A K ++ A+++ + +++ G
Sbjct: 865 IQPDRITYINLINALRKNDEFLEAVKWSLWMKQMGL 900
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 103/244 (42%), Gaps = 2/244 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+LE N+ + ++ Y K + ++E M+ G C Q + M+ +Y++
Sbjct: 234 MLENGVRPNVATFGMVMSLYQKGWNVADSEYAFSQMRSFGITC-QSAYSAMITIYTRMSL 292
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
AEE + I+ L+ ++ ++ AY + G L E +L M Y
Sbjct: 293 YDKAEEVIDFIQEDKVILNLENWLVLLNAYSQQGKLQEAERVLFSMQNAGFSPNIVAYNM 352
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ GY N + AQ +F ++ G+ PD +I + A ++A + +++ G
Sbjct: 353 LITGYGKASNMDAAQHIFRNLKNVGLEPDESTYRSMIEGWGRAENYKEAEWYYNELKRLG 412
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+P+ + +++ K A L D++R G L A ++R G ++ V
Sbjct: 413 FKPNSSNLYTMINLQAKYADGEDAARTLDDMKRIGCQYSSVLGTLLQA-YERAGRIDRVP 471
Query: 401 HVLR 404
+L+
Sbjct: 472 LILK 475
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 106/240 (44%), Gaps = 8/240 (3%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA---E 225
N+ +I Y + +AEN L +K D + +++V MY K+G+LK A
Sbjct: 553 NLHIMCTMIDIYSTLGRFSDAENLYLKLKSSEISLDMIAFSIVVRMYVKSGSLKDACSVL 612
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
ET +E K + D + M+ Y + GMLD+ + L + V SE+Y ++
Sbjct: 613 ETMDEQKNIVP--DIYLFCDMLRIYQQCGMLDKLQDLYYRILKTGVTWDSEMYNCVINCC 670
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
+ + R+F+ + G P+ ++++ Y + +KA RK GL
Sbjct: 671 ARALPVDELSRLFDEMLLHGFAPNTITLNVMLDVYGKSRLFKKARKVLWLARKRGLVDV- 729
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEA-SCTLAAWFKRLGVVEEVEHVLR 404
I++A + L + L + ++ +GF V E +C L ++ K G +E VLR
Sbjct: 730 ISYNTIIAAYGQSKDLKKMLSTVRQMQFNGFSVSLEVYNCMLDSYGKE-GQIESFRSVLR 788
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 94/238 (39%), Gaps = 42/238 (17%)
Query: 137 DWLAVL----KQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENT 192
+WL +L +Q KL E L ++ F NI Y +I GYGK + A++
Sbjct: 314 NWLVLLNAYSQQGKLQEAERVL----FSMQNAGFSPNIVAYNMLITGYGKASNMDAAQHI 369
Query: 193 LLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG-EPLDKRSY-------- 243
+K G D+ T M+ + +A N K AE + E+K LG +P Y
Sbjct: 370 FRNLKNVGLEPDESTYRSMIEGWGRAENYKEAEWYYNELKRLGFKPNSSNLYTMINLQAK 429
Query: 244 -------------------------GSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
G+++ AY RAG +DR ++L+ + V V
Sbjct: 430 YADGEDAARTLDDMKRIGCQYSSVLGTLLQAYERAGRIDRVPLILKGSFYEYVLVNQTSC 489
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
L+ Y + + A +V + Q+ + + L+I + + G+ + A + M
Sbjct: 490 SILVMAYVKHCLVDDAIKVLQEKQWKDTIFEDNLYHLVICSCKELGRLENAVKIYSQM 547
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+ E E ++ Y+ +++GY +M+I A AM +G D + +++ Y KA
Sbjct: 330 TMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAK 389
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ A++ F E+ G D +Y +++ + G L + L + M + Y
Sbjct: 390 RIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYS 449
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
LL G+ G A R+F +Q + PD M +LI+A G + A F +
Sbjct: 450 MLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQ 509
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
GL P+ + I++ KE L+ ALE ++E DG
Sbjct: 510 GLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDG 545
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 96/218 (44%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
A++ + + + Y +I GY K +I A+ M +G D V ++ + G
Sbjct: 365 AMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLG 424
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
L+ A++ F+ + G D +Y ++ + + G L + L R M + + +Y
Sbjct: 425 RLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYN 484
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ GN + A+++F + G+ P+ ++ +IN G +A AF+NM
Sbjct: 485 ILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGD 544
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
G P + +I+ + +RA + + ++ GF+
Sbjct: 545 GCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFV 582
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 98/237 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
NI + ++ K+ ++ A+ M G D VT + ++ YS + A + F
Sbjct: 304 NIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLF 363
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ + G D SY ++ Y +A +D + L EM Q + + Y L+ G
Sbjct: 364 DAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQL 423
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G AQ +F+ + G PD ++L++ + G KA+ F+ M+ L+P
Sbjct: 424 GRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMY 483
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+++ A K L A + +L G + + T+ + G+++E R
Sbjct: 484 NILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRN 540
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 82/213 (38%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E + N+ Y +I K + A + MK + D T ++ K
Sbjct: 228 EAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWK 287
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A E+ L + ++ +V A + G + + + + M V Y +L+
Sbjct: 288 EASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLM 347
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
GYS+ A+++F+A+ G PDA +LI Y A + +A F M GL
Sbjct: 348 YGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLT 407
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDG 375
P + ++ + +L A + ++ +G
Sbjct: 408 PDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNG 440
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 92/247 (37%), Gaps = 5/247 (2%)
Query: 164 ESFEAN-----IRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
+ FEA+ + YT II+G K + A M+ G + VT +++ K
Sbjct: 189 DDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKD 248
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
+ A + F +K D +Y S++ LL EM + + +
Sbjct: 249 KLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTF 308
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
L+ G AQ VF+ + G+ PD + L+ Y + + +A F M
Sbjct: 309 NVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMIT 368
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
G +P +++ K +++ A + ++ G TL +LG + E
Sbjct: 369 KGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLRE 428
Query: 399 VEHVLRE 405
+ + +
Sbjct: 429 AQDLFKN 435
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 38/75 (50%)
Query: 301 IQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQ 360
++ AG++PD ++LI+ + + A++ F M K GL+P +++ K +
Sbjct: 121 MELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGK 180
Query: 361 LNRALEFLIDLERDG 375
+A+EF D E G
Sbjct: 181 FAQAVEFFDDFEASG 195
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 89/183 (48%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++E + Y ++ GY K A + M R+G + D VT T ++ + KAGN
Sbjct: 253 MVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGN 312
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ A E++ G +++ ++ +++ + + G LD + +REM + Y A
Sbjct: 313 LERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNA 372
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ GY M G + A+ + ++ G+ PD + +++AY G + A+ Q M + G
Sbjct: 373 LINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENG 432
Query: 341 LEP 343
+ P
Sbjct: 433 VLP 435
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 88/205 (42%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E + N+ + +++G K ++++A M + G D V+ +V Y K G
Sbjct: 220 EGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSH 279
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A F E+ G D ++ S++ +AG L+R L+REM + + + + AL+
Sbjct: 280 EALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALI 339
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G+ G + A ++ I P LIN Y M G+ +A + M G++
Sbjct: 340 DGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVK 399
Query: 343 PSDKCVALILSACEKENQLNRALEF 367
P + ILSA K + A +
Sbjct: 400 PDVVTYSTILSAYCKNGDTHSAFQL 424
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 86/199 (43%)
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
T ++V G+ K A +++ G + +Y ++V A+ RAG +DR E L+ M
Sbjct: 159 TYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMM 218
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
+ + +++ G G E A++VF+ + G+ PD L+ Y G S
Sbjct: 219 REGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCS 278
Query: 327 QKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
+A + F M + G+ P ++ K L RA+ + ++ G + + L
Sbjct: 279 HEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTAL 338
Query: 387 AAWFKRLGVVEEVEHVLRE 405
F + G +++ +RE
Sbjct: 339 IDGFCKKGFLDDALLAVRE 357
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 1/199 (0%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
++L + N+ Y ++ + + A + L M+ G + VT +V + +AG
Sbjct: 147 SMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAG 206
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ AE + ++ G + ++ S+V +AG ++ + EM + + Y
Sbjct: 207 EVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYN 266
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ GY G S A VF + GI PD LI+ AG ++A + MR+
Sbjct: 267 TLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRER 326
Query: 340 GLEPSD-KCVALILSACEK 357
GL+ ++ ALI C+K
Sbjct: 327 GLQMNEITFTALIDGFCKK 345
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 89/209 (42%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
+ N Y ++ + + ++ AE + M+ G + VT +V KAG ++ A +
Sbjct: 189 DPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARK 248
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
F+E+ G D SY ++V Y + G + EM + + + +L+
Sbjct: 249 VFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMC 308
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
GN E A + ++ G+ + LI+ + G A A + MR+ ++PS
Sbjct: 309 KAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVV 368
Query: 347 CVALILSACEKENQLNRALEFLIDLERDG 375
C +++ +++ A E + ++E G
Sbjct: 369 CYNALINGYCMVGRMDEARELVREMEAKG 397
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 72/157 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+GY ++ A + M+ +G D VT + ++ Y K G+ A + +++
Sbjct: 370 YNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQML 429
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y S++ L VL + M + + Y +L+ G+ GN E
Sbjct: 430 ENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVE 489
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
A + + + AG+ PD ++LIN + ++++A
Sbjct: 490 RALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEA 526
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 87/215 (40%), Gaps = 35/215 (16%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E + N +T +I G+ KK + +A LLA++ Q + VV Y+
Sbjct: 325 ERGLQMNEITFTALIDGFCKKGFLDDA---LLAVREM----RQCRIQPSVVCYN------ 371
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
+++ Y G +D L+REM+A+ V Y +L
Sbjct: 372 ----------------------ALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTIL 409
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
Y NG++ A ++ + + G+ PDA + LI + A+ F+NM GL+
Sbjct: 410 SAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQ 469
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
P + ++ KE + RAL ++ + G +
Sbjct: 470 PDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVL 504
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 107/254 (42%), Gaps = 19/254 (7%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y+ I+ Y K +A M G + D +T + ++ + + L A F
Sbjct: 401 DVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLF 460
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ + LG D+ +Y S++ + + G ++R L EM V Y L+ G S +
Sbjct: 461 KNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKS 520
Query: 289 GNSEGAQRVFEAIQF-----AGITPDARM-CA---------LLINAYQMAGQSQKAYTAF 333
++ AQR+ + A I DA M C L+ + M G +A +
Sbjct: 521 ARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVY 580
Query: 334 QNM--RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFK 391
Q++ R L+ S V LI C +E + +AL F + + GF ++ +L
Sbjct: 581 QSILDRNWNLDGSVYSV-LIHGHC-REGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLF 638
Query: 392 RLGVVEEVEHVLRE 405
G+V E + V+++
Sbjct: 639 EKGMVVEADQVIQQ 652
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 89/213 (41%), Gaps = 16/213 (7%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+LE + Y+ +I ++ ++ +A M G D+VT T ++ + K GN
Sbjct: 428 MLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGN 487
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ A +E+ G D +Y ++ ++ + LL ++ +E + Y A
Sbjct: 488 VERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDA 547
Query: 281 LLR---------------GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQ 325
L+R G+ M G A +V+++I D + ++LI+ + G
Sbjct: 548 LMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGN 607
Query: 326 SQKAYTAFQNMRKAGLEP-SDKCVALILSACEK 357
KA + + M + G P S ++LI EK
Sbjct: 608 VMKALSFHKQMLQCGFAPNSTSTISLIRGLFEK 640
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 75/194 (38%)
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
V++ +L A F+ + G + +Y +V A G +LR+M
Sbjct: 129 VLLALSDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGC 188
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
+ Y L+ + G + A+R+ + ++ G+ P+ ++N AG+ + A
Sbjct: 189 DPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARK 248
Query: 332 AFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFK 391
F M K GL P ++ K + AL ++ R G M +L
Sbjct: 249 VFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMC 308
Query: 392 RLGVVEEVEHVLRE 405
+ G +E ++RE
Sbjct: 309 KAGNLERAVGLVRE 322
Score = 38.1 bits (87), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 44/224 (19%), Positives = 89/224 (39%), Gaps = 23/224 (10%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE------ 226
YT +I G+ K+ ++ A + M + G + D VT +V++ SK+ K A+
Sbjct: 475 YTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLY 534
Query: 227 ---------TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
++ + + +S +++ + G+++ + + + + + + V
Sbjct: 535 HEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSV 594
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y L+ G+ GN A + + G P++ LI G +A Q +
Sbjct: 595 YSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLL 654
Query: 338 K----AGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
A E S + L L KE ++ L+ L + RDG +
Sbjct: 655 NCCSLADAEASKALIDLNL----KEGNVDAVLDVLHGMARDGLL 694
>gi|356513139|ref|XP_003525271.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 621
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 108/245 (44%), Gaps = 1/245 (0%)
Query: 132 KPRRADWLAVLKQLKLMEHPL-YLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAE 190
KP + + ++K ++ P +++ E+ +E+ + N R Y +I + K +++ A
Sbjct: 162 KPTTSTYNTLIKGFGIVGRPYESMKLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAW 221
Query: 191 NTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAY 250
N L M G D VT M Y++ G + AE +++ ++R+ G ++ Y
Sbjct: 222 NVLHKMVASGIQPDVVTYNTMARAYAQNGETEKAERLILKMQYNKVKPNERTCGIIISGY 281
Query: 251 VRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDA 310
+ G + L M V+ V+ +L++GY ++ G ++ GI PD
Sbjct: 282 CKEGNMTEALRFLYRMKELGVHPNPVVFNSLIKGYLDATDTNGVDEALTLMEEFGIKPDV 341
Query: 311 RMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLID 370
+ ++NA+ AG F +M KAG+EP +++ + Q +A L
Sbjct: 342 VTFSTIMNAWSSAGLMDNCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAESLLTS 401
Query: 371 LERDG 375
+ + G
Sbjct: 402 MSKYG 406
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 75/182 (41%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+ +I GY + L M+ G D VT + ++ +S AG + EE F ++
Sbjct: 309 FNSLIKGYLDATDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIFNDMV 368
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y + YVRAG + E LL M V ++ ++ G+ G +
Sbjct: 369 KAGIEPDIHAYSILAKGYVRAGQPRKAESLLTSMSKYGVQTNVVIFTTIISGWCAAGKMD 428
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + E + G +P+ + LI Y A Q KA M + G+ P + L+
Sbjct: 429 RAFSLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEEILSTMEERGVVPEMSTMQLVA 488
Query: 353 SA 354
A
Sbjct: 489 DA 490
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/281 (18%), Positives = 108/281 (38%), Gaps = 36/281 (12%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L EE + + YT ++ ++ + ++ L + G D + L M+ +S +G
Sbjct: 86 LTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNGMKPDSILLNAMINAFSDSGK 145
Query: 221 LKMAEETFEEIK-------------------LLGEPL-----------------DKRSYG 244
+ A + F+++K ++G P + R+Y
Sbjct: 146 VDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIVGRPYESMKLLEMMGQDENVKPNDRTYN 205
Query: 245 SMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFA 304
++ A+ L+ +L +M A + Y + R Y+ NG +E A+R+ +Q+
Sbjct: 206 ILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETEKAERLILKMQYN 265
Query: 305 GITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
+ P+ R C ++I+ Y G +A M++ G+ P+ ++ N
Sbjct: 266 KVKPNERTCGIIISGYCKEGNMTEALRFLYRMKELGVHPNPVVFNSLIKGYLDATDTNGV 325
Query: 365 LEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
E L +E G T+ + G+++ E + +
Sbjct: 326 DEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIFND 366
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 100/235 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N R II GY K+ + A L MK G + V ++ Y A + +E
Sbjct: 270 NERTCGIIISGYCKEGNMTEALRFLYRMKELGVHPNPVVFNSLIKGYLDATDTNGVDEAL 329
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ G D ++ +++ A+ AG++D E + +M + Y L +GY
Sbjct: 330 TLMEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIFNDMVKAGIEPDIHAYSILAKGYVRA 389
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G A+ + ++ G+ + + +I+ + AG+ +A++ + M + G P+ K
Sbjct: 390 GQPRKAESLLTSMSKYGVQTNVVIFTTIISGWCAAGKMDRAFSLCEKMHEMGTSPNLKTY 449
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
++ + Q +A E L +E G + +A ++ +G+ +E +L
Sbjct: 450 ETLIWGYGEAKQPWKAEEILSTMEERGVVPEMSTMQLVADAWRAIGLFKEANRIL 504
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 32/167 (19%), Positives = 70/167 (41%), Gaps = 1/167 (0%)
Query: 159 LALLEE-SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSK 217
L L+EE + ++ ++ I++ + + N E M + G D +++ Y +
Sbjct: 329 LTLMEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIFNDMVKAGIEPDIHAYSILAKGYVR 388
Query: 218 AGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
AG + AE + G + + +++ + AG +DR L +M +
Sbjct: 389 AGQPRKAESLLTSMSKYGVQTNVVIFTTIISGWCAAGKMDRAFSLCEKMHEMGTSPNLKT 448
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAG 324
Y+ L+ GY A+ + ++ G+ P+ L+ +A++ G
Sbjct: 449 YETLIWGYGEAKQPWKAEEILSTMEERGVVPEMSTMQLVADAWRAIG 495
>gi|227463004|gb|ACP39954.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463006|gb|ACP39955.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 547
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 87/202 (43%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E F+ D+ +++ K ++ A MK+R F+ D + T+++ + K NL
Sbjct: 219 EFGFKLETSDFNRLLDTLCKSRHVEKANKVFDKMKKRRFVPDIKSYTILLEGWGKEHNLL 278
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
+E + E+K G D +YG ++ AY +A D L EM+A+ VY L+
Sbjct: 279 RLDEVYLEMKYDGFEPDVVTYGILISAYCKAKKYDAAIELFHEMEAKNCKPTPHVYCTLI 338
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G A FE + G TP+A L+ AY + + A+ MRK
Sbjct: 339 NGLGSEKRLSEALEFFERFKSCGFTPEAPTYNSLVGAYCWSMRIDDAFQVIDEMRKHSAG 398
Query: 343 PSDKCVALILSACEKENQLNRA 364
P+ + +IL K + N A
Sbjct: 399 PNSRTYDIILHHLIKARRTNEA 420
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 93/214 (43%), Gaps = 1/214 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
++ F+ N Y +I GK Q + + + MK R + ++ T ++ +++A ++
Sbjct: 150 QKGFKYNTESYNALIEALGKIKQFKLIRSLVNEMKSRKLL-NKDTFALISRRHARARKVE 208
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A E FE ++ G L+ + ++ ++ +++ + +M + + Y LL
Sbjct: 209 EAIEAFERMEEFGFKLETSDFNRLLDTLCKSRHVEKANKVFDKMKKRRFVPDIKSYTILL 268
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G+ N V+ +++ G PD +LI+AY A + A F M +
Sbjct: 269 EGWGKEHNLLRLDEVYLEMKYDGFEPDVVTYGILISAYCKAKKYDAAIELFHEMEAKNCK 328
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
P+ +++ E +L+ ALEF + GF
Sbjct: 329 PTPHVYCTLINGLGSEKRLSEALEFFERFKSCGF 362
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 95/271 (35%), Gaps = 71/271 (26%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F +I+ YT ++ G+GK+ + + L MK GF D VT +++ Y KA A
Sbjct: 257 FVPDIKSYTILLEGWGKEHNLLRLDEVYLEMKYDGFEPDVVTYGILISAYCKAKKYDAAI 316
Query: 226 ETFEEI----------------------KLLGEPLD-------------KRSYGSMVMAY 250
E F E+ K L E L+ +Y S+V AY
Sbjct: 317 ELFHEMEAKNCKPTPHVYCTLINGLGSEKRLSEALEFFERFKSCGFTPEAPTYNSLVGAY 376
Query: 251 VRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG-------------YSMNGNSEG---- 293
+ +D ++ EM S Y +L + N G
Sbjct: 377 CWSMRIDDAFQVIDEMRKHSAGPNSRTYDIILHHLIKARRTNEAYFRFQKMSNEPGCEPT 436
Query: 294 -------------------AQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
A++V++ ++ G+ P M + LI + + +A FQ
Sbjct: 437 VSTYEIIVRMFCNEDRVDLAKQVWDQMKAKGVLPGMHMYSDLITSLCHKNKLGEACKYFQ 496
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRAL 365
M AG+ P K + + A E + + AL
Sbjct: 497 EMLDAGIRPPAKMFSNLKQALLDEGKNDEAL 527
>gi|226507918|ref|NP_001144813.1| uncharacterized protein LOC100277891 [Zea mays]
gi|195647376|gb|ACG43156.1| hypothetical protein [Zea mays]
Length = 597
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 119/280 (42%), Gaps = 6/280 (2%)
Query: 137 DWLAVLKQLKLMEH--PLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLL 194
D + V QL+L P+ + V E L SF +I Y +I YG+K Q+ AE +
Sbjct: 138 DIVNVAVQLRLNRQWEPI-ITVCEWVLRRSSFRPDIICYNLLIDAYGQKRQLSEAEAAYM 196
Query: 195 AMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG 254
A+ + + T +++ Y +G L AE E++ G P Y + + ++A
Sbjct: 197 ALLEARCVPTEDTYALLLRAYCGSGQLHRAEGVISEMQRNGIPPTATVYNAYLDGLLKAR 256
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
++ + + M + +Z Y ++ Y + RVF ++ G P+
Sbjct: 257 CSEKAVEVYQRMKKERCRTNTZTYXLMINVYGKANQPMSSLRVFREMKSVGCKPNICTYT 316
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
L+NA+ G +KA F+ M++AG EP ++ A + A E +E
Sbjct: 317 ALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHM 376
Query: 375 GFMVGKEASCTLAAWFKRLGVVEEVEHV---LREYGLRET 411
G + + L F R G+ +E E L++ G+R T
Sbjct: 377 GCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQGMRPT 416
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 98/231 (42%), Gaps = 10/231 (4%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
NI YT +++ + ++ + AE M++ G D ++ YS+AG + A E F
Sbjct: 311 NICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIF 370
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G D+ SY +V A+ RAG+ E +E+ Q + + + LL ++ +
Sbjct: 371 SLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARS 430
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK----AGLEPS 344
GN + V + +G+ PD ++NAY AG+ F M + + P
Sbjct: 431 GNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAMERGDGASAGAPD 490
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGV 395
++++A + L+R L G + + W R+G
Sbjct: 491 TSTYNVLVNAYGRAGYLDRMEAAFRSLAARGL------AADVVTWTSRIGA 535
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 88/212 (41%), Gaps = 4/212 (1%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E + Y ++ +G+ Q AE +K++G + +++ ++++GN+ EE
Sbjct: 379 EPDRASYNILVDAFGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEE 438
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMD----AQEVYVGSEVYKALL 282
++ G D + +M+ AY RAG LD E L M+ A + Y L+
Sbjct: 439 VMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAMERGDGASAGAPDTSTYNVLV 498
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
Y G + + F ++ G+ D I AY + + F+ M AG
Sbjct: 499 NAYGRAGYLDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQCLRVFEEMVDAGCY 558
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERD 374
P ++L+AC E Q+ + + + +D
Sbjct: 559 PDAGTAKVLLAACSDERQVEQVTAIVRSMHKD 590
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 84/183 (45%), Gaps = 4/183 (2%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+ E ++ Y ++ Y + Q A M+ G D+ + ++V + +AG +
Sbjct: 340 QAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQ 399
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
AE F+E+K G +S+ ++ A+ R+G + R E ++ ++ + + A+L
Sbjct: 400 EAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAML 459
Query: 283 RGYSMNGNSEGAQRVFEAIQ----FAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
Y G + +R+F A++ + PD +L+NAY AG + AF+++
Sbjct: 460 NAYGRAGRLDDMERLFAAMERGDGASAGAPDTSTYNVLVNAYGRAGYLDRMEAAFRSLAA 519
Query: 339 AGL 341
GL
Sbjct: 520 RGL 522
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 76/183 (41%), Gaps = 6/183 (3%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L ++ ++ + ++ + + + E + + + G D L M+ Y +AG
Sbjct: 408 LKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGR 467
Query: 221 LKMAEETFEEIKL-----LGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
L E F ++ G P D +Y +V AY RAG LDR E R + A+ +
Sbjct: 468 LDDMERLFAAMERGDGASAGAP-DTSTYNVLVNAYGRAGYLDRMEAAFRSLAARGLAADV 526
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
+ + + Y+ RVFE + AG PDA +L+ A Q ++ ++
Sbjct: 527 VTWTSRIGAYARKKEYGQCLRVFEEMVDAGCYPDAGTAKVLLAACSDERQVEQVTAIVRS 586
Query: 336 MRK 338
M K
Sbjct: 587 MHK 589
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 85/204 (41%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +IHGY Q + A M RG I + VT + V K G ++ A E F+ +
Sbjct: 284 YNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSML 343
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G L+ SY +++ Y AG L L M + V+ L+ GY+ G
Sbjct: 344 AKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVR 403
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +FE +Q G+ PD +I+A+ G A F +M G+EP+ ++
Sbjct: 404 EAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLI 463
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
L +A E + ++ G
Sbjct: 464 QGFCTHGDLVKAEELVYEIRNKGL 487
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 104/251 (41%), Gaps = 35/251 (13%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
++L + + NI Y+ ++HGY + + N M R G + +Q ++V Y+K G
Sbjct: 341 SMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCG 400
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A FE+++ G D +Y +++ A+ R G +D M + V VY+
Sbjct: 401 MVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQ 460
Query: 280 ALLRGYSMNGN-------------------------------SEG----AQRVFEAIQFA 304
L++G+ +G+ EG AQR+F+ I
Sbjct: 461 CLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRT 520
Query: 305 GITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
G D + LI+ Y + G+ +A+ M G+EP +++ C K +++
Sbjct: 521 GEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDG 580
Query: 365 LEFLIDLERDG 375
L +L G
Sbjct: 581 LILFRELLHKG 591
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 76/183 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+ ++ N+ Y +IH K + A+ L M G D VT ++ YS G
Sbjct: 237 MTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQ 296
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
K A F+E+ G + + + V + G ++ M A+ + Y
Sbjct: 297 WKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYST 356
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL GY+ G +F + GI P+ + +L+N Y G ++A F++M+K G
Sbjct: 357 LLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRG 416
Query: 341 LEP 343
L P
Sbjct: 417 LNP 419
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 88/206 (42%)
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G C+ V + +V K G + A + F E+ G P + +Y S++ A +A +D+
Sbjct: 206 GCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKA 265
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+ +LR+M V + Y L+ GYS G + A R+F+ + G+ P+ C+ +
Sbjct: 266 QGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAF 325
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
G+ ++A F +M G + + + +L L + RDG +
Sbjct: 326 LCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPN 385
Query: 380 KEASCTLAAWFKRLGVVEEVEHVLRE 405
+ L + + G+V E + +
Sbjct: 386 QHVFNILVNGYAKCGMVREAMFIFED 411
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 73/167 (43%)
Query: 170 IRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFE 229
I + +I+ K+ ++ A+ + R G D T ++ Y G + A +
Sbjct: 491 ILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHD 550
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
+ +G D +YG++V + G +D G +L RE+ + V + Y +L G G
Sbjct: 551 AMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAG 610
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
+ A+ +F+ + +GI ++L+ +++A T FQ +
Sbjct: 611 RTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKL 657
Score = 44.7 bits (104), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 81/198 (40%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
+A++ +T +I GY ++ A AM G D VT +V K G +
Sbjct: 523 KADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLI 582
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
F E+ G +YG ++ AG + + +EM + V Y LL G
Sbjct: 583 LFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLC 642
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
N +E A VF+ + + D + ++I+ A + ++A F ++ GL P+ +
Sbjct: 643 RNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQ 702
Query: 347 CVALILSACEKENQLNRA 364
+++ KE + A
Sbjct: 703 TYTIMMENLIKEGSVEEA 720
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/205 (17%), Positives = 84/205 (40%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
A++ E +I Y +++G K +I + + +G T +++ AG
Sbjct: 551 AMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAG 610
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
A+E F+E+ G + +Y ++ R + + +++ A V +
Sbjct: 611 RTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILN 670
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
++ E A+ +F +I G+ P + +++ G ++A F M K+
Sbjct: 671 IMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKS 730
Query: 340 GLEPSDKCVALILSACEKENQLNRA 364
GL P+ + +I+ ++ ++ +A
Sbjct: 731 GLSPTSHFINVIVRTLLEKGEIVKA 755
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 86/185 (46%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
LL + ++ Y +I G +K + A M R + + +T ++++ + + G
Sbjct: 427 TLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKG 486
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A +E+ G + R+Y S++ Y R+G + +G+ L++M V+ +
Sbjct: 487 QVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFN 546
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ GY N GA VF ++ + PDA ++IN + G Q A F+ M +
Sbjct: 547 TLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDS 606
Query: 340 GLEPS 344
G+EP
Sbjct: 607 GIEPD 611
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 87/174 (50%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I + +K Q+++A L M ++G + + T ++ Y ++GN+K ++ ++++
Sbjct: 475 YSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMR 534
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
D ++ +++ Y++ + + M+ + V + Y ++ G+S GN +
Sbjct: 535 QDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQ 594
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
A RVF+ + +GI PD LIN + AG S++A+ M G P DK
Sbjct: 595 DAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPDDK 648
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 135/311 (43%), Gaps = 21/311 (6%)
Query: 97 RKMTKRCKAFVKQIIC-VSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQ 155
R+ K + F C V+P+ + + L+ + R + + A +K K M+H
Sbjct: 241 RRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEA-----VKFYKEMQH----- 290
Query: 156 VAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
++ ++ +I + ++ ++ +A L MK G + D V T+++ +
Sbjct: 291 --------RYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGF 342
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
+AG++ A +E+ G D +Y +++ + L E LL EM+ + V
Sbjct: 343 CRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDL 402
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
+ L+ GY GN E A ++F+ + + PD LI+ G KA + +
Sbjct: 403 CTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDD 462
Query: 336 MRKAGLEPSDKCVALIL-SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
M + P+ ++++ S CEK Q+ A FL ++ + G + ++ + R G
Sbjct: 463 MHAREILPNHITYSILIDSHCEK-GQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSG 521
Query: 395 VVEEVEHVLRE 405
V++ + L++
Sbjct: 522 NVKKGQQFLQK 532
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 92/226 (40%)
Query: 140 AVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR 199
A+L L P Q A +L E N ++H Y K ++ A+ + M++R
Sbjct: 127 ALLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKR 186
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
D VT V++ +AG++ A + + G +Y S++ + D+
Sbjct: 187 CVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKA 246
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+ + R MD V + L+ G+ G + A + ++ +Q +TPD + LI
Sbjct: 247 KEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGL 306
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
+ G+ A + M+ GL P +++ + ++ AL
Sbjct: 307 FSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEAL 352
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 94/225 (41%), Gaps = 4/225 (1%)
Query: 140 AVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR 199
+ KQ +L++ L E E ++ +T +IHGY ++ +NA + R+
Sbjct: 376 GLCKQHRLLDAEKLLNEME----ERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQ 431
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
D VT ++ + G+L A E ++++ + +Y ++ ++ G ++
Sbjct: 432 RLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDA 491
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
L EM + Y ++++GY +GN + Q+ + ++ + PD LI+
Sbjct: 492 FGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHG 551
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
Y A+ F M K + P +I++ ++ + A
Sbjct: 552 YIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDA 596
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 84/199 (42%)
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
TL +MV Y K A+ E++ D ++ ++ A RAG +D L+ M
Sbjct: 159 TLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSM 218
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
+ + G Y ++L+G + + A+ VF + + PD R +LI + G+
Sbjct: 219 ANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEV 278
Query: 327 QKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
++A ++ M+ + P + ++ + +++ A +L +++ G + +
Sbjct: 279 KEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMV 338
Query: 387 AAWFKRLGVVEEVEHVLRE 405
F R G + E V E
Sbjct: 339 IGGFCRAGSMSEALRVRDE 357
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 85/216 (39%), Gaps = 4/216 (1%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
++ + I Y ++ G K + A+ M + D + +++ + + G
Sbjct: 217 SMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVG 276
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+K A + ++E++ D S+ ++ + R G +D LREM + +Y
Sbjct: 277 EVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYT 336
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
++ G+ G+ A RV + + G PD L+N + A M +
Sbjct: 337 MVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEER 396
Query: 340 GLEPSDKC--VALILSACEKENQLNRALEFLIDLER 373
G+ P D C LI C + N N AL+ L R
Sbjct: 397 GVTP-DLCTFTTLIHGYCRQGNFEN-ALQLFDTLLR 430
>gi|162462150|ref|NP_001105879.1| chloroplast RNA processing1 [Zea mays]
gi|3289002|gb|AAC25599.1| CRP1 [Zea mays]
Length = 668
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 1/196 (0%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQV-TLTVMVVMYSKAGNLKMAEETFEEIK 232
T +I G ++ AE L G I + ++ Y + G+LK AE+ +E+
Sbjct: 267 TALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMS 326
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D+ +Y +V AY RAG + +LL+EM+A V S V+ +L G+ G+ +
Sbjct: 327 QCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQ 386
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A V +Q +G+ PD ++I+ + A AF MR+ G+EP ++
Sbjct: 387 KAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLI 446
Query: 353 SACEKENQLNRALEFL 368
A K + +RA E
Sbjct: 447 DAHCKGGRHDRAAELF 462
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 99/233 (42%), Gaps = 10/233 (4%)
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
R Y ++ GY + ++NAE L M + G D+ T +++V Y++AG + A +E
Sbjct: 300 RAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKE 359
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGE-----VLLREMDAQEVYVGSEVYKALLRGY 285
++ D S V + + AG DRG+ +LREM A V Y ++ +
Sbjct: 360 MEA-----DGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTF 414
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
A F ++ GI PD LI+A+ G+ +A F+ MR++ P
Sbjct: 415 GKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGT 474
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
++++ ++ L +++ G + TL + R G +E
Sbjct: 475 TTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKE 527
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 109/249 (43%), Gaps = 6/249 (2%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+++I+ G+ + Q A L M+ G D+ VM+ + K L A + F +++
Sbjct: 372 FSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMR 431
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D ++ +++ A+ + G DR L EM G+ Y ++ + E
Sbjct: 432 EEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWE 491
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
G + + ++ G+ P+ L++ Y +G+ ++A + M+ GL+PS ++
Sbjct: 492 GVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALV 551
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWF---KRLGVVEEVEHVLREYGLR 409
+A + + AL + ++ DG V +L F +R+ V +RE GLR
Sbjct: 552 NAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLR 611
Query: 410 E---TYSKI 415
TY+ +
Sbjct: 612 PDVITYTTL 620
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 89/227 (39%), Gaps = 37/227 (16%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE-- 230
Y +I +GK + +A + M+ G D VT ++ + K G A E FEE
Sbjct: 407 YNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMR 466
Query: 231 --------------IKLLGE--------------------PLDKRSYGSMVMAYVRAGML 256
I LLGE P + +Y ++V Y R+G
Sbjct: 467 ESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVP-NIITYTTLVDVYGRSGRY 525
Query: 257 DRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALL 316
+ M A + +Y AL+ Y+ G ++ A V +A++ G+ + L
Sbjct: 526 KEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSL 585
Query: 317 INAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNR 363
INA+ + +A++ Q MR+ GL P ++ A + Q ++
Sbjct: 586 INAFGEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKALIRVEQFDK 632
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 67/171 (39%), Gaps = 2/171 (1%)
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
EP D + ++ A+ RA + D LL A + S AL+ G A+
Sbjct: 225 EP-DAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAE 283
Query: 296 RVFEAIQFAG-ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSA 354
+F AG I P R L+ Y G + A M + G+ P + +L++ A
Sbjct: 284 ALFLEFFLAGEIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDA 343
Query: 355 CEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ + A L ++E DG + A F+ G ++ VLRE
Sbjct: 344 YTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLRE 394
>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 606
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 110/246 (44%), Gaps = 2/246 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L++ N+ Y +I+G +I A M G + +T ++ + K G
Sbjct: 322 MLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGM 381
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+K A + F+ +K G R Y ++ AY + G +D G L EM+ + + Y
Sbjct: 382 MKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNC 441
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G NGN E A+++F+ + G+ PD +L+ Y G+S+KA + M K G
Sbjct: 442 LIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMG 500
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCT-LAAWFKRLGVVEEV 399
L+P +++ KE L A +E++ + AS L + + G +E+
Sbjct: 501 LKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDA 560
Query: 400 EHVLRE 405
+L E
Sbjct: 561 NMLLNE 566
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 98/248 (39%), Gaps = 38/248 (15%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVR--- 252
M RR + T V++ K G + A + E++K+ G + SY +++ Y +
Sbjct: 214 MIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGG 273
Query: 253 AGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF-------------- 298
G + + + +L+EM EV + L+ G+ + N G+ +VF
Sbjct: 274 NGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVIT 333
Query: 299 ---------------EAIQF------AGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
EAI AG+ P+ LIN + G ++A F +++
Sbjct: 334 YNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVK 393
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
G P+ + +++ A K +++ ++ER+G + L A R G +E
Sbjct: 394 GQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIE 453
Query: 398 EVEHVLRE 405
+ + +
Sbjct: 454 AAKKLFDQ 461
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 62/147 (42%), Gaps = 2/147 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
E ++ Y +I G + I+ A+ + +G + D VT +++ Y G +
Sbjct: 430 EGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKG-LPDLVTFHILMEGYCSRGESRK 488
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE-VYVGSEVYKALL 282
A +E+ +G +Y M+ Y + G L + +M+ + + + Y LL
Sbjct: 489 AAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLL 548
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPD 309
+GYS G E A + + G+ P+
Sbjct: 549 QGYSQKGKLEDANMLLNEMLEKGLVPN 575
Score = 37.7 bits (86), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 38/206 (18%), Positives = 85/206 (41%), Gaps = 7/206 (3%)
Query: 168 ANIRDYTKI---IHGYGKKMQIQNAENTLLAMKRRGFIC-DQVTLTVMVVMYSKAGNLKM 223
AN + Y+KI + G+ + + A+ +C + + ++V+ Y+ ++
Sbjct: 112 ANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFEL 171
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
E F+ G L S +++A ++ E L +EM +++ + ++
Sbjct: 172 GFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVIN 231
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTA---FQNMRKAG 340
G A+ V E ++ G +P+ LI+ Y G + K Y A + M +
Sbjct: 232 ALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENE 291
Query: 341 LEPSDKCVALILSACEKENQLNRALE 366
+ P+ +++ K++ L +L+
Sbjct: 292 VSPNLTTFNILIDGFWKDDNLPGSLK 317
>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 107/238 (44%)
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA 224
E +I + +I K Q++ A + + M+ + + VT + M+ Y K G + A
Sbjct: 336 GIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEA 395
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
+ ++K G D+ SY +++ Y + G D + ++M+ + Y AL+
Sbjct: 396 ISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDA 455
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
Y G + A +F+ ++ G+ P+ + LI++Y AG Q F ++AGL+P
Sbjct: 456 YGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPD 515
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
+ ++ +C K + A+ L ++ + G +L + R G +++E V
Sbjct: 516 VVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRYGQADKLEAV 573
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 85/181 (46%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ N+ Y+ +I GYGK + A + MK G D+V+ ++ +Y+K G
Sbjct: 370 KNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDD 429
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A ++++ +G D +Y +++ AY + G L +M + + Y AL+
Sbjct: 430 ALIACKDMERVGLKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALID 489
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
YS G + VF + AG+ PD + + LI++ G + A Q M +AG++P
Sbjct: 490 SYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQP 549
Query: 344 S 344
+
Sbjct: 550 N 550
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 97/213 (45%), Gaps = 1/213 (0%)
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG-NLKM 223
F N+ Y+ ++ YG+ + + A AMK+ G + +T ++ K G +LK
Sbjct: 230 GFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKQ 289
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A + F+E++ G D+ ++ S++ R G+ + + + EM + + + L+
Sbjct: 290 ALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQRRGIEQDIFTFNTLID 349
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G E A + ++ I+P+ + +I+ Y G ++A + + +M+++G+ P
Sbjct: 350 AVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGVRP 409
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGF 376
++ K + + AL D+ER G
Sbjct: 410 DRVSYNTLIDIYAKLGRFDDALIACKDMERVGL 442
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 106/239 (44%), Gaps = 1/239 (0%)
Query: 169 NIRDYTKIIHGYGKK-MQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
N+ Y II GK + ++ A + M++ G D++T ++ + S+ G + ++
Sbjct: 269 NLITYNTIIDACGKGGVDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWEDSQRV 328
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
F E++ G D ++ +++ A + G ++ ++ M + + Y ++ GY
Sbjct: 329 FAEMQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGK 388
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G E A ++ ++ +G+ PD LI+ Y G+ A A ++M + GL+
Sbjct: 389 LGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVT 448
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREY 406
++ A K+ + A ++ +G + L + + G+ ++V +V E+
Sbjct: 449 YNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEF 507
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 101/228 (44%), Gaps = 19/228 (8%)
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA 224
+A++ Y +I YGK+ + ++A MK G + + +T + ++ YSKAG +
Sbjct: 441 GLKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDV 500
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
F E K G D Y S++ + + G+++ VLL+EM + Y +L+
Sbjct: 501 SNVFTEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDA 560
Query: 285 YSMNGNSE-----------GAQRVFE-AIQFAGITPDARMCALLINAYQMAGQSQKAYTA 332
Y G ++ Q++ E +++ P ++ NA G A +
Sbjct: 561 YGRYGQADKLEAVKANMPNSVQKIGERSMEVVRKPPPSQQ-----NASDHTG-VLAAVSV 614
Query: 333 FQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLE-RDGFMVG 379
F M++ GL+P+ + IL+AC + L A L + DG++ G
Sbjct: 615 FHEMQQFGLKPNVVTFSAILNACSRCASLQEASVLLEQMRFFDGWVYG 662
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G E A VF Q AG + + +++AY +G+ ++A FQ M+KAG +P+
Sbjct: 214 GKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITY 273
Query: 349 ALILSACEKEN-QLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
I+ AC K L +AL+ +++++G + +L A R G+ E+ + V E
Sbjct: 274 NTIIDACGKGGVDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAE 331
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 71/180 (39%), Gaps = 6/180 (3%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
E N+ Y+ +I Y K Q+ N KR G D V + ++ K G ++
Sbjct: 475 EGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSSLIDSCCKCGLVED 534
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A +E+ G + +Y S++ AY R G D+ E + M +G + + +
Sbjct: 535 AVVLLQEMTQAGIQPNIVTYNSLIDAYGRYGQADKLEAVKANMPNSVQKIGERSMEVVRK 594
Query: 284 GYSMNGNSE------GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
N+ A VF +Q G+ P+ + ++NA Q+A + MR
Sbjct: 595 PPPSQQNASDHTGVLAAVSVFHEMQQFGLKPNVVTFSAILNACSRCASLQEASVLLEQMR 654
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 111/261 (42%), Gaps = 6/261 (2%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+LE+ ++ Y I++G K+ + A+ M RG D T T ++ YSK GN
Sbjct: 455 MLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGN 514
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A FE + D +Y +++ + + +++ L +M ++ +Y Y
Sbjct: 515 MNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGI 574
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ GY G A R+++ + G C ++ Y AG + KA NM G
Sbjct: 575 LINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKG 634
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+ P +++ KE ++RA + +E G + + F R G ++E E
Sbjct: 635 IVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAE 694
Query: 401 HVLR---EYGL---RETYSKI 415
++ E G+ R TY+ +
Sbjct: 695 LIMLKMIERGVNPDRSTYTSL 715
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 75/174 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+GY + A M +GF +T +V Y +AGN A+E +
Sbjct: 572 YGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNML 631
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
L G D +Y +++ +++ +DR L+ +M+ + Y +L G+S G +
Sbjct: 632 LKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQ 691
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
A+ + + G+ PD LIN + ++A+ M + G P DK
Sbjct: 692 EAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDDK 745
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/361 (21%), Positives = 147/361 (40%), Gaps = 37/361 (10%)
Query: 17 QVFDEITAPKPGLRLSWRNLSLHRKPAKWSRSLRSGPA--LEAIKAEDMGKTQVKDDTSM 74
+ D IT+ P + S ++ S SR L A L ++ + + ++ + + +
Sbjct: 116 RFIDSITSNCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVE-SLV 174
Query: 75 FTWIQIGPN------ITEEQKQAISQFPRKMTKRCKAF---VKQIICVSPETGNLSDLLA 125
T+ G N + QA RK+ + C+AF + +CVS N LL
Sbjct: 175 LTYGNCGSNPLVFDLLVRTYVQA-----RKLREGCEAFRVLKSKGLCVSINACN--SLLG 227
Query: 126 AWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQ 185
V+ W+ + +Y +V + + N+ +I+ K +
Sbjct: 228 GLVK------VGWVD-------LAWEIYQEV-----VRSGVQVNVYTLNIMINALCKNQK 269
Query: 186 IQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGS 245
I+N ++ L M+ +G D VT ++ Y + G L+ A E + + G +Y +
Sbjct: 270 IENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNA 329
Query: 246 MVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAG 305
++ + G R + +L EM + + Y LL N N A+R+F+ + G
Sbjct: 330 IINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQG 389
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
+ PD + LI G +A F++M+ AGL P + +++ + ++ AL
Sbjct: 390 VVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEAL 449
Query: 366 E 366
+
Sbjct: 450 K 450
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 67/159 (42%)
Query: 185 QIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYG 244
+ +AE M +G + D V+ + ++ + SK G L A + F ++K G D Y
Sbjct: 374 NMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYT 433
Query: 245 SMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFA 304
++ + R G++ + EM Q + Y +L G A +F +
Sbjct: 434 ILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTER 493
Query: 305 GITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G+ PD LIN Y G KA T F+ M + L+P
Sbjct: 494 GVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKP 532
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 70/159 (44%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
MK G D V T+++ + + G + A + +E+ G LD +Y +++ + M
Sbjct: 420 MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKM 479
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
L + L EM + V+ + L+ GYS +GN A +FE + + PD
Sbjct: 480 LSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNT 539
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSA 354
LI+ + + +K + +M + P+ ++++
Sbjct: 540 LIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILING 578
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 83/208 (39%)
Query: 198 RRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLD 257
R G + TL +M+ K ++ + +++ G D +Y +++ AY R G+L+
Sbjct: 247 RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLE 306
Query: 258 RGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
L+ M + + Y A++ G G A+ V + + G++PD +L+
Sbjct: 307 EAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILL 366
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
A F M G+ P + ++ K L++AL++ D++ G
Sbjct: 367 VECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLA 426
Query: 378 VGKEASCTLAAWFKRLGVVEEVEHVLRE 405
L F R GV+ E V E
Sbjct: 427 PDNVIYTILIGGFCRNGVMSEALKVRDE 454
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 68/152 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E+ FEA I I+ GY + A+ L M +G + D +T ++ + K N
Sbjct: 595 MVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEEN 654
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A +++ G D +Y ++ + R G + E+++ +M + V Y +
Sbjct: 655 MDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTS 714
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARM 312
L+ G+ N + A RV + + G PD +
Sbjct: 715 LINGHVTQNNLKEAFRVHDEMLQRGFVPDDKF 746
>gi|255661142|gb|ACU25740.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 426
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 106/218 (48%), Gaps = 4/218 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 213 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDR 272
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ Y +M++AY RAG++ + LL E+ + + ++ +L
Sbjct: 273 AAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDIAIHILA 331
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + + F MR G P
Sbjct: 332 G---AGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFP 388
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKE 381
+ALIL+A K ++ ++A + ++++ G + E
Sbjct: 389 DSNVIALILNAYGKLHEFDKANDVYMEMQEVGCVFSDE 426
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 100/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + M+ G + + ++ MY + A
Sbjct: 75 FTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPTTASYSTLLTMYVENKKFLEAL 134
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 135 SVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 194
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + ++ Y + +KA Q M+ G+E
Sbjct: 195 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIE 251
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 252 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRL 311
Query: 403 LRE 405
L E
Sbjct: 312 LHE 314
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 100/233 (42%), Gaps = 4/233 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F ++
Sbjct: 117 YSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMR 176
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+G + SY +++ Y A + L R M + + Y +++ Y E
Sbjct: 177 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 236
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + +Q GI P++ + +I+ + G+ +A FQ +R +G++ ++
Sbjct: 237 KANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMI 296
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
A E+ + A L +L+R + A LA G +EE V R+
Sbjct: 297 VAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAG----AGRIEEATWVFRQ 345
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ A + L M++ D V + ++ + K + A F +K
Sbjct: 12 YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 71
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +M+ + +A + L+ EM V + Y LL Y N
Sbjct: 72 RSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPTTASYSTLLTMYVENKKFL 131
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF ++ D C ++I+ Y G +++A F MRK G+EP+
Sbjct: 132 EALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 32/172 (18%), Positives = 76/172 (44%), Gaps = 2/172 (1%)
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
D+ +Y +++ + + G+ D L++M+ V +Y L+ + A +F
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
++ +G TPD +IN + A ++A + MR AG+ P+ + +L+ +
Sbjct: 68 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPTTASYSTLLTMYVEN 127
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRE 410
+ AL ++ ++ + + +LG+ +E + + +G+R+
Sbjct: 128 KKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF--WGMRK 177
>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
Length = 745
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 112/252 (44%), Gaps = 3/252 (1%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
A+++ N+ YT + G K+ +Q A L M +G + T ++ KAG
Sbjct: 456 AMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAG 515
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
L+ A T ++ D +Y +++ A ++G LDR LL+EM + + Y
Sbjct: 516 YLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYN 575
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ G+ M+G EG +++ + + I P+A L+ Y + + ++ MR
Sbjct: 576 VLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSR 635
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF-MVGKEASCTLAAWFKRLGVVE- 397
+ P++ +++ K + AL F ++ + GF + S + K+ VE
Sbjct: 636 DVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEA 695
Query: 398 -EVEHVLREYGL 408
E+ H +R+ GL
Sbjct: 696 RELFHDMRKEGL 707
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 89/206 (43%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E N YT ++ K I +A + M +R I D+ T ++ + G+L A
Sbjct: 323 EPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARR 382
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
F+E++ G D +Y +M+ RA L+ E LL+EM A+ + V Y L+ GY
Sbjct: 383 WFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYC 442
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G A ++ A+ G+TP+ L + G Q A M GLE +
Sbjct: 443 KRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNAC 502
Query: 347 CVALILSACEKENQLNRALEFLIDLE 372
+++ K L +A+ + D++
Sbjct: 503 TYNSLINGLCKAGYLEQAMRTMADMD 528
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 79/172 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I+G + ++++ AE L M R D+VT TV++ Y K G + A + +
Sbjct: 399 YTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMV 458
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +Y ++ + G + LL EM + + + + Y +L+ G G E
Sbjct: 459 QRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLE 518
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A R + A + PD LI+A +G +A++ Q M G++P+
Sbjct: 519 QAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPT 570
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 86/204 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT ++ G+ K + +A M+R+G D VT T M+ +A L+ AE+ +E+
Sbjct: 364 YTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMW 423
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+D+ +Y ++ Y + G + + M + V Y AL G G+ +
Sbjct: 424 ARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQ 483
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + G+ +A LIN AG ++A +M A L+P ++
Sbjct: 484 AANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLI 543
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
A K L+RA L ++ G
Sbjct: 544 DALCKSGDLDRAHSLLQEMLDKGI 567
>gi|255661170|gb|ACU25754.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 426
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 106/218 (48%), Gaps = 4/218 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 213 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDR 272
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ Y +M++AY RAG++ + LL E+ + + ++ +L
Sbjct: 273 AAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDIAIHILA 331
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + + F MR G P
Sbjct: 332 G---AGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVVVFDKMRGLGYFP 388
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKE 381
+AL+L+A K ++ ++A + ++++ G + E
Sbjct: 389 DSNVIALVLNAYGKLHEFDKANDVYMEMQEVGCVFSDE 426
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 101/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + M+ G + + + ++ MY + A
Sbjct: 75 FTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEAL 134
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 135 SVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 194
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + ++ Y + +KA Q M+ G+E
Sbjct: 195 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIE 251
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 252 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRL 311
Query: 403 LRE 405
L E
Sbjct: 312 LHE 314
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 101/237 (42%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 113 NTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 172
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 173 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 232
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G++
Sbjct: 233 LEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLY 292
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE V R+
Sbjct: 293 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAG----AGRIEEATWVFRQ 345
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ A + L M++ D V + ++ + K + A F +K
Sbjct: 12 YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 71
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +M+ + +A + L+ EM V + Y LL Y N
Sbjct: 72 RSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFL 131
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF ++ D C ++I+ Y G +++A F MRK G+EP+
Sbjct: 132 EALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 32/172 (18%), Positives = 76/172 (44%), Gaps = 2/172 (1%)
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
D+ +Y +++ + + G+ D L++M+ V +Y L+ + A +F
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
++ +G TPD +IN + A ++A + MR AG+ P+ + +L+ +
Sbjct: 68 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVEN 127
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRE 410
+ AL ++ ++ + + +LG+ +E + + +G+R+
Sbjct: 128 KKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF--WGMRK 177
>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
Length = 1263
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 101/226 (44%), Gaps = 5/226 (2%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
L+ ++ EL + F N+ ++ GK M+I+ M R+G+ VT +
Sbjct: 902 LFAEMKELGCGPDEFTYNL-----LLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTI 956
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ K+ L+ A + + + G +YG ++ ++AG ++ E L EM
Sbjct: 957 ISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGC 1016
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
+Y LL G+ + GN+E +F+ + GI PD + ++I+ AGQ T
Sbjct: 1017 KANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLT 1076
Query: 332 AFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
F+ + + GLEP L++ K +L A+ ++++ G +
Sbjct: 1077 YFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIV 1122
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 84/199 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ +G Q+ AMK G+ + V T ++ + G + A E F+E+K
Sbjct: 428 YITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMK 487
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G ++ SY S++ +++A L + MD + + Y +G S
Sbjct: 488 QKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESI 547
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + +E ++ GI PD ++ +G+ A F ++ G+ P +++
Sbjct: 548 KAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMI 607
Query: 353 SACEKENQLNRALEFLIDL 371
C K ++ + A++ D+
Sbjct: 608 KCCSKASKFDEAVKIFYDM 626
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 94/217 (43%), Gaps = 2/217 (0%)
Query: 154 LQVAELALLEESFEANIRD--YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
L+ EL +SF +++ Y +I G + I AE MK G D+ T ++
Sbjct: 862 LEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLL 921
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ K+ ++ + EE+ G +Y +++ V++ L++ L + +Q
Sbjct: 922 LDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGF 981
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
Y LL G G E A+ +F + G + + +L+N +++AG ++K
Sbjct: 982 SPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCH 1041
Query: 332 AFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFL 368
FQ+M G+ P K +I+ K QLN L +
Sbjct: 1042 LFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYF 1078
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 102/249 (40%), Gaps = 4/249 (1%)
Query: 132 KPRRADWLAVLK-QLKLME-HPLYLQVAEL--ALLEESFEANIRDYTKIIHGYGKKMQIQ 187
KPR A A L+LM H +AE+ + + +AN+ + I G G + ++
Sbjct: 208 KPRVAQTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLR 267
Query: 188 NAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMV 247
+A L MK G + + T +V K+G + A E + + + G R+Y ++
Sbjct: 268 SAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLM 327
Query: 248 MAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGIT 307
+A+ + ++ LLREM+A V Y +R + A R+ ++ G
Sbjct: 328 VAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCK 387
Query: 308 PDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
PD +LI AG+ A F M+K+ +P +L +E
Sbjct: 388 PDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEI 447
Query: 368 LIDLERDGF 376
++ DG+
Sbjct: 448 WNAMKADGY 456
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 107/284 (37%), Gaps = 42/284 (14%)
Query: 173 YTKI--IHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
YT + I+ YGK + A MK +G + D V ++ +K+G L MA+ F E
Sbjct: 531 YTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHE 590
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
+K +G D +Y M+ +A D + +M +L+ G
Sbjct: 591 LKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGR 650
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
+ A R+F ++ + P L+ G+ ++ + M + P+
Sbjct: 651 GDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNT 710
Query: 351 ILSACEKENQLNRALEFLIDLERDG------------FMVGKEAS--------------- 383
IL K +N AL+ L + G + + KE
Sbjct: 711 ILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVL 770
Query: 384 -------CTLAAWFKRLGVVEEVEHVLREYGLRETYSKIPGSRS 420
CT+ F ++G+++E H++++Y L+ PGS++
Sbjct: 771 IPDYATLCTILPSFVKIGLMKEALHIIKDYFLQ------PGSKT 808
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/313 (18%), Positives = 129/313 (41%), Gaps = 54/313 (17%)
Query: 109 QIICVSPETGNLSDLLAAWVRF----MKPRRADWLAVLKQLKLMEHPLYLQVAEL--ALL 162
Q++C + G +SD + + KP R ++ +L K ++ V E+ A+
Sbjct: 398 QVLC---DAGRISDAKDVFWKMKKSDQKPDRVTYITLLD--KFGDNGDSQSVMEIWNAMK 452
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+ + N+ YT +I + ++ A MK++G + +Q + ++ + KA
Sbjct: 453 ADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFG 512
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG----MLDRGEVLLREMDAQEVYVGSEVY 278
A E F+ + + G + ++ + Y ++G + R E++ + +V G+
Sbjct: 513 DALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGN--- 569
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDA-------RMCA----------------- 314
A+L G + +G A+RVF ++ G++PD + C+
Sbjct: 570 -AVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIE 628
Query: 315 -----------LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNR 363
LI+ AG+ +A+ F +++ LEP+D +L+ +E ++
Sbjct: 629 NNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKE 688
Query: 364 ALEFLIDLERDGF 376
+ L ++ +
Sbjct: 689 VMHLLEEMYHSNY 701
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 86/195 (44%), Gaps = 1/195 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++++ +I+ YT II K Q+ + + G D +T +++ K+
Sbjct: 1046 MVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKR 1105
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ A F E++ G + +Y S+++ +AG + E+ + Y A
Sbjct: 1106 LEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNA 1165
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+RGYS++G+++ A + + G P++ + ++ + G +K T+ ++ A
Sbjct: 1166 LIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTDSSNCSSPEAVGTVRKQITSHRSYHNAK 1225
Query: 341 LEPSDKCVALILSAC 355
EP+ K + C
Sbjct: 1226 -EPTTKAWRWLSKGC 1239
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 92/218 (42%), Gaps = 1/218 (0%)
Query: 159 LALLE-ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSK 217
LA +E E + ++ +T +I +I +A++ MK+ D+VT ++ +
Sbjct: 378 LAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGD 437
Query: 218 AGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
G+ + E + +K G + +Y +++ A + G + + EM + +
Sbjct: 438 NGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYS 497
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y +L+ G+ A +F+ + G P+ L IN Y +G+S KA ++ M+
Sbjct: 498 YNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMK 557
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
G+ P +L K +L A +L+ G
Sbjct: 558 SKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMG 595
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 37/207 (17%), Positives = 86/207 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++R Y+ ++ +GK+ ++ L M+ G + + T+ + + +A A
Sbjct: 319 SVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRIL 378
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+++ G D ++ ++ AG + + + +M + Y LL + N
Sbjct: 379 AKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDN 438
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G+S+ ++ A++ G + +I+A G+ +A F M++ G+ P
Sbjct: 439 GDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSY 498
Query: 349 ALILSACEKENQLNRALEFLIDLERDG 375
++S K ++ ALE ++ G
Sbjct: 499 NSLISGFLKADRFGDALELFKHMDIHG 525
>gi|255661216|gb|ACU25777.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 426
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 105/212 (49%), Gaps = 4/212 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 213 KNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMQNRGIEPNAITYSTIISIWGKVGKLDR 272
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ Y +M++AY RAG++ + LL E+ + + + +L
Sbjct: 273 AAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDTAIHILA 331
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + + F+ MR G P
Sbjct: 332 G---AGRIEEATWVFRQAIDAGEVKDITVFERMIDLFSKYRKYTNVGEVFEKMRGLGYFP 388
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDG 375
+AL+L+A K ++ ++A E ++++ +G
Sbjct: 389 DSNVIALVLNAYGKLHEFDKANEVYMEMQDEG 420
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 97/233 (41%), Gaps = 4/233 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ I+ Y + + A + M+ + D T +M+ +Y + K A+ F ++
Sbjct: 117 YSTILTMYVENHKFLEALSVFREMREINCLLDLTTCNIMIDVYGQLDMAKEADRLFWSMR 176
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+G + SY +++ Y A + L R M + + Y ++ Y E
Sbjct: 177 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHE 236
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + +Q GI P+A + +I+ + G+ +A FQ +R +G+E ++
Sbjct: 237 KANNLIQEMQNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMI 296
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
A E+ + A L +L+R + A LA G +EE V R+
Sbjct: 297 VAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAG----AGRIEEATWVFRQ 345
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 75/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ +A + L M++ D V + ++ + K + A F +K
Sbjct: 12 YSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 71
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y SM+ + +A + L+ EM V + Y +L Y N
Sbjct: 72 RSGITPDLVAYNSMINVFGKAKLFKEARSLISEMRVAGVMPDTVSYSTILTMYVENHKFL 131
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF ++ D C ++I+ Y +++A F +MRK G+EP+
Sbjct: 132 EALSVFREMREINCLLDLTTCNIMIDVYGQLDMAKEADRLFWSMRKMGIEPN 183
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 93/245 (37%), Gaps = 35/245 (14%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
+KR G D V M+ ++ KA K A E+++ G D SY +++ YV
Sbjct: 70 LKRSGITPDLVAYNSMINVFGKAKLFKEARSLISEMRVAGVMPDTVSYSTILTMYVENHK 129
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
+ REM + ++ Y ++ A R+F +++ GI P+
Sbjct: 130 FLEALSVFREMREINCLLDLTTCNIMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNT 189
Query: 316 LINAY---QMAGQS--------------------------------QKAYTAFQNMRKAG 340
L+ Y ++ G++ +KA Q M+ G
Sbjct: 190 LLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMQNRG 249
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+EP+ + I+S K +L+RA L G + + T+ ++R G+V +
Sbjct: 250 IEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAK 309
Query: 401 HVLRE 405
+L E
Sbjct: 310 RLLHE 314
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 97/209 (46%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ +T +IH K ++ A + M+ RG ++VT T ++ + K G L A
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
EE++ G Y +++ Y + G +D L+REM+A+ V Y ++ GY
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKV 411
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
GN + A ++ + + G+ PDA + LI + A F+NM + G++P +
Sbjct: 412 GNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTY 471
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFM 377
++ KE + +AL ++ R G +
Sbjct: 472 TTLIDGHCKEGNVEKALSLHDEMIRKGVL 500
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 105/238 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ E ++ Y ++ GY K + + M +RG + D VT T ++ KAGN
Sbjct: 249 MVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGN 308
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ A +++ G +++ ++ +++ + + G LD + + EM + Y A
Sbjct: 309 LEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNA 368
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ GY G + A+ + ++ + PD + +I+ Y G A+ Q M K G
Sbjct: 369 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 428
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
+ P + ++ +E +LN A E ++ + G + TL + G VE+
Sbjct: 429 VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEK 486
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 91/213 (42%)
Query: 155 QVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
+V L E + + N+ + +++G K +++ A M R G D V+ ++
Sbjct: 208 RVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSG 267
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
Y K G L + F E+ G D ++ S++ A +AG L++ L+ +M + + +
Sbjct: 268 YCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMN 327
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+ AL+ G+ G + A E ++ GI P LIN Y G+ A +
Sbjct: 328 EVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIR 387
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
M ++P + I+S K L+ A +
Sbjct: 388 EMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQL 420
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 88/209 (42%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E N +T +I G+ KK + +A + M++ G V ++ Y K G +
Sbjct: 321 ERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMD 380
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
+A E E++ D +Y +++ Y + G LD L ++M + V + Y +L+
Sbjct: 381 LARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLI 440
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
RG A +FE + G+ PD LI+ + G +KA + M + G+
Sbjct: 441 RGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVL 500
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDL 371
P +++++ K + A L L
Sbjct: 501 PDVVTYSVLINGLSKSARTKEAHRLLFKL 529
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 90/205 (43%), Gaps = 1/205 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFI-CDQVTLTVMVVMYSKAGNLKMAEET 227
N Y ++ + + ++ AE + M+ G + VT MV KAG ++ A +
Sbjct: 186 NAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKV 245
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
F+E+ G D SY +++ Y + G L + EM + + + +L+
Sbjct: 246 FDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCK 305
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
GN E A + ++ G+ + LI+ + G A A + MRK G++PS C
Sbjct: 306 AGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVC 365
Query: 348 VALILSACEKENQLNRALEFLIDLE 372
+++ K +++ A E + ++E
Sbjct: 366 YNALINGYCKLGRMDLARELIREME 390
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 104/250 (41%), Gaps = 7/250 (2%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
++L N+ Y ++ + +++ A + M+ G + VT +V + +AG
Sbjct: 142 SMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAG 201
Query: 220 NLKMAEETFEEIKLLGEPLDKR----SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
L AE + L+ E + + ++ SMV +AG ++ + EM + +
Sbjct: 202 ELDGAERV---VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDV 258
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
Y LL GY G + VF + G+ PD LI+A AG ++A
Sbjct: 259 VSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQ 318
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGV 395
MR+ GL ++ ++ K+ L+ AL + ++ + G L + +LG
Sbjct: 319 MRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGR 378
Query: 396 VEEVEHVLRE 405
++ ++RE
Sbjct: 379 MDLARELIRE 388
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/252 (19%), Positives = 105/252 (41%), Gaps = 15/252 (5%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y+ II GY K + +A M ++G + D +T + ++ + L A E F
Sbjct: 397 DVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELF 456
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E + LG D+ +Y +++ + + G +++ L EM + V Y L+ G S +
Sbjct: 457 ENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKS 516
Query: 289 GNSEGAQRVFEAIQFAGITPDA---------------RMCALLINAYQMAGQSQKAYTAF 333
++ A R+ + PD + L+ + M G ++A +
Sbjct: 517 ARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVY 576
Query: 334 QNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRL 393
Q+M + ++++ + + +AL F + R GF ++ +L
Sbjct: 577 QSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEE 636
Query: 394 GVVEEVEHVLRE 405
G+V E ++ +++
Sbjct: 637 GMVVEADNAIQD 648
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 98/231 (42%), Gaps = 20/231 (8%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I G+ K+ ++ A + M R+G + D VT +V++ SK+ K A ++
Sbjct: 471 YTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLY 530
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
D Y ++++ +A + ALL+G+ M G +
Sbjct: 531 HEDPVPDNIKYDALMLCCSKAEF--------------------KSVVALLKGFCMKGLMK 570
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +V++++ D + ++LI+ + G +KA + + M ++G P+ ++
Sbjct: 571 EADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLV 630
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+E + A + DL + EAS L ++ G V+ + VL
Sbjct: 631 RGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVL 681
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 114/237 (48%), Gaps = 8/237 (3%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+G GK +I A + ++ M++ G T ++ Y +AG L+ +++
Sbjct: 401 YNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQ 460
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + SYGS+V A+ + G + +L +M ++V G++VY A++ Y G+++
Sbjct: 461 EKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTD 520
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + E ++ +G+ P LLI Q +A ++R GL P ++
Sbjct: 521 QAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLI 580
Query: 353 SACEKENQLNRALEFLIDLERDGFMVG-KEASCTLAAWFKRLGV---VEEVEHVLRE 405
SAC + +RALE LE++ + G K + T F LG V E+E++ ++
Sbjct: 581 SACCYRSNTDRALE----LEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQ 633
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 95/204 (46%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+GY + ++ A + MK R D +T ++ K + A + E++
Sbjct: 366 YNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEME 425
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G ++ +++ AY RAG L++ ++L +M + + Y +++ + NG
Sbjct: 426 KNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKIL 485
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + + + P A++ +I+AY G + +A+ + M+ +G+ PS L++
Sbjct: 486 EAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLI 545
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
K++Q++ A E L L G
Sbjct: 546 KGLCKQSQISEAEELLDSLRNYGL 569
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 110/259 (42%), Gaps = 3/259 (1%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + N+ Y ++ G + ++ L M R + D T +++ +S+ G+
Sbjct: 249 MLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGD 308
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ FEE G + + ++ + G + + E +L+ + + + +Y
Sbjct: 309 SQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNT 368
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ GY G+ EGA +F+ ++ I PD LIN + +A+ M K G
Sbjct: 369 LINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNG 428
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+ PS + ++ A + QL + L D++ G + ++ F + G + E
Sbjct: 429 VNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAV 488
Query: 401 HVLREYGLRETYSKIPGSR 419
+L + +++ +PG++
Sbjct: 489 AILDDMFIKDV---LPGAQ 504
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 105/250 (42%), Gaps = 3/250 (1%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E++ N Y +I G+ KK +++ M R G + +T V++ +AG +
Sbjct: 216 EKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMG 275
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
+E+ D +Y + + R G L E + V +G+ LL
Sbjct: 276 ETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILL 335
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G +G A+ V + + +G+ + LIN Y G + A++ FQ M+ +
Sbjct: 336 NGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIR 395
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P +++ K ++ A + +I++E++G E TL + R G +E+ +
Sbjct: 396 PDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFII 455
Query: 403 L---REYGLR 409
L +E GL+
Sbjct: 456 LSDMQEKGLK 465
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 38/191 (19%), Positives = 74/191 (38%), Gaps = 4/191 (2%)
Query: 159 LALLEESFEANI----RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
+A+L++ F ++ + Y II Y + A MK G VT +++
Sbjct: 488 VAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKG 547
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
K + AEE + ++ G D SY +++ A DR L +EM +
Sbjct: 548 LCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPS 607
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
Y+ L G + +++ + + P + + ++++AY G+ K +
Sbjct: 608 PRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRK 667
Query: 335 NMRKAGLEPSD 345
M G+ D
Sbjct: 668 EMSDKGIAVGD 678
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 89/199 (44%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y+ +I GY + +I+ A L M G D ++ SKAG ++ A
Sbjct: 383 NVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYL 442
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
EI+ G D ++G+ ++ Y + G + EM + + +Y L+ G+
Sbjct: 443 LEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKA 502
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
GN A +F + G+ PD + C+ I+ G+ Q+A F +++ GL P
Sbjct: 503 GNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTY 562
Query: 349 ALILSACEKENQLNRALEF 367
+ ++S K+ ++ +A E
Sbjct: 563 SSLISGFCKQGEVEKAFEL 581
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 116/258 (44%), Gaps = 8/258 (3%)
Query: 123 LLAAWVRFMKPRRADWLAVL----KQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIH 178
LL R +KP + A + K K+ E Y +L+ N YT +I+
Sbjct: 442 LLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFD----EMLDHGLMPNNPLYTVLIN 497
Query: 179 GYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPL 238
G+ K + A + + G + D T + + K G ++ A + F E+K G
Sbjct: 498 GHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVP 557
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
D +Y S++ + + G +++ L EM + + +Y AL+ G +G+ + A+++F
Sbjct: 558 DVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLF 617
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
+ + G+ PD+ + +I+ Y + +A++ F M G++P ++ C KE
Sbjct: 618 DGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKE 677
Query: 359 NQLNRALEFLIDLERDGF 376
+ +A+ ++ + GF
Sbjct: 678 GDMEKAMNLFREMLQKGF 695
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I Y II K +++ A LL ++ RG D VT ++ YSK G + A + F
Sbjct: 418 DIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYF 477
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+ G + Y ++ + +AG L + R + A V + A + G N
Sbjct: 478 DEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKN 537
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A +VF ++ G+ PD + LI+ + G+ +KA+ M G+ P+
Sbjct: 538 GRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIY 597
Query: 349 ALILSACEKENQLNRA 364
++ K + RA
Sbjct: 598 NALVDGLCKSGDIQRA 613
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 99/253 (39%), Gaps = 6/253 (2%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N R + +I GY ++ + A L M++R + V+ M+ +L +A +
Sbjct: 313 NSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLL 372
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++ G + Y +++M Y G ++ LL M V Y A++ S
Sbjct: 373 EKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKA 432
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G E A IQ G+ PDA I Y G+ +A F M GL P++
Sbjct: 433 GKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLY 492
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV---LRE 405
++++ K L AL L G + + + G V+E V L+E
Sbjct: 493 TVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKE 552
Query: 406 YGLRE---TYSKI 415
GL TYS +
Sbjct: 553 KGLVPDVFTYSSL 565
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 110/255 (43%), Gaps = 4/255 (1%)
Query: 159 LALLEESFEANIR----DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
L LL+E + N+ Y +I+G + A L M G + V + +++
Sbjct: 334 LELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMG 393
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
Y+ G ++ A + + G D Y +++ +AG ++ L E+ + +
Sbjct: 394 YASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPD 453
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+ + A + GYS G A + F+ + G+ P+ + +LIN + AG +A + F+
Sbjct: 454 AVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFR 513
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
++ G+ P + + + K ++ AL+ +L+ G + +L + F + G
Sbjct: 514 HLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQG 573
Query: 395 VVEEVEHVLREYGLR 409
VE+ + E L+
Sbjct: 574 EVEKAFELHDEMCLK 588
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 96/216 (44%), Gaps = 3/216 (1%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKL 233
+ +I G+ ++ I M G + +T V++ K G ++ A E + +
Sbjct: 248 SALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMIT 307
Query: 234 LGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEG 293
LG + R++ ++ Y R + R LL EM+ + + + Y A++ G +
Sbjct: 308 LGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSL 367
Query: 294 AQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILS 353
A ++ E + F+G+ P+ + + LI Y G+ ++A M +G+ P C I+S
Sbjct: 368 ANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIIS 427
Query: 354 ACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAW 389
K ++ A +L++++ G K + T A+
Sbjct: 428 CLSKAGKMEEASTYLLEIQGRGL---KPDAVTFGAF 460
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 89/233 (38%), Gaps = 34/233 (14%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
NI Y ++ G K IQ A M +G D VT + M+ Y K+ N+ A F
Sbjct: 593 NIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLF 652
Query: 229 EEI-----------------------------KLLGEPLDKR-----SYGSMVMAYVRAG 254
E+ L E L K S+ +++ Y ++
Sbjct: 653 HEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSC 712
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
+ L +EM A+++ Y ++ + G E A +F+ +Q + D
Sbjct: 713 KIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYT 772
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
L+ Y GQS + + F+ M G++P + L++ A KE+ L A +
Sbjct: 773 SLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKL 825
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 76/171 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I + K +++ A M+ R I D VT T ++ Y+K G FE++
Sbjct: 736 YTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMV 795
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D+ +YG ++ A+ + L L E+ + + ++ L+ +
Sbjct: 796 AKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLT 855
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
A ++ + + G+ P C+ L+ ++ AG+ +A F+ ++ GL P
Sbjct: 856 EASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVP 906
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 86/213 (40%)
Query: 191 NTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAY 250
N+L +M +G + + T T++ +A + A+ TFEE++ G D + +++ +
Sbjct: 195 NSLRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGF 254
Query: 251 VRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDA 310
+R G +D + M + + + Y L+ G G E A + + + G P++
Sbjct: 255 MREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNS 314
Query: 311 RMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLID 370
R LLI Y +A M K L PS +++ L+ A + L
Sbjct: 315 RTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEK 374
Query: 371 LERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+ G TL + G +EE +L
Sbjct: 375 MTFSGLKPNVVVYSTLIMGYASEGRIEEARRLL 407
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 60/147 (40%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +++GY K Q M +G D+VT +++ + K NL A + +E+
Sbjct: 771 YTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVV 830
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + ++ A + L LL EM + L+R + G +
Sbjct: 831 GKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMD 890
Query: 293 GAQRVFEAIQFAGITPDARMCALLINA 319
A RVFE ++ G+ PD L+N
Sbjct: 891 EATRVFEGVKSLGLVPDTTTLIDLVNG 917
>gi|297808589|ref|XP_002872178.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318015|gb|EFH48437.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 123/289 (42%), Gaps = 9/289 (3%)
Query: 92 ISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRF----MKPRRADWLAVLKQLKL 147
+S+ + TK F +I E+GN+ D + A ++ + P + + ++K +
Sbjct: 97 VSEVEQSGTKPDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGI 156
Query: 148 MEHPLYLQVAELALLEES---FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICD 204
P +LEES NIR + ++ + KK +++ A + M+ G D
Sbjct: 157 AGKPERSSALLDLMLEESNVDVRPNIRTFNVLVQAWCKKKKVEEAWEVVHKMEECGVRPD 216
Query: 205 QVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPL--DKRSYGSMVMAYVRAGMLDRGEVL 262
VT + Y + G AE E ++ E + R+ G +V Y R G + G
Sbjct: 217 TVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRF 276
Query: 263 LREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQM 322
+R M V V+ +L+ G+ + +G V ++ + D + ++NA+
Sbjct: 277 VRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSS 336
Query: 323 AGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDL 371
AG +KA F+ M KAG++P +++ + + +A E L L
Sbjct: 337 AGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETL 385
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 1/192 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E EAN+ + +I+G+ + M + L MK D +T + ++ +S AG ++
Sbjct: 282 EMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYME 341
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A + F+E+ G D +Y + YVRA + E LL + E ++ ++
Sbjct: 342 KAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIV-ESRPNVVIFTTVI 400
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G+ +G+ + A RVF + G++P+ + L+ Y Q KA Q MR G++
Sbjct: 401 SGWCSSGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGFGVK 460
Query: 343 PSDKCVALILSA 354
P + L+ A
Sbjct: 461 PENSTFLLLAEA 472
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/192 (18%), Positives = 82/192 (42%), Gaps = 1/192 (0%)
Query: 155 QVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
+V E +++E + N R ++ GY ++ ++++ + MK + V ++
Sbjct: 239 EVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLING 298
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
+ + + +E +K D +Y +++ A+ AG +++ + +EM V
Sbjct: 299 FVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPD 358
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+ Y L +GY + A+ + E + P+ + +I+ + +G A F
Sbjct: 359 AHAYSILAKGYVRAKEPKKAEELLETL-IVESRPNVVIFTTVISGWCSSGSMDDAMRVFN 417
Query: 335 NMRKAGLEPSDK 346
M K G+ P+ K
Sbjct: 418 KMCKFGVSPNIK 429
>gi|242054943|ref|XP_002456617.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
gi|241928592|gb|EES01737.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
Length = 410
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 91/206 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +IHGY + Q + + M+R G + T +V + + G K A F+E+
Sbjct: 76 YTALIHGYFVRGQREMGFALVGEMRRGGVEPNLYTYNCLVGEWCRTGEFKSARLLFDEMP 135
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
L G + SY ++ R G L L M + ++ + L+ GY G
Sbjct: 136 LKGVVRNVVSYNILIAGLCRHGKLKDAAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMS 195
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A F ++ AG+ P LI + A A AF +M++ L P+ +++
Sbjct: 196 NALHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRAFSDMKERRLAPTKVTYTILI 255
Query: 353 SACEKENQLNRALEFLIDLERDGFMV 378
A KEN+++RA E L ++E+ G V
Sbjct: 256 GAFAKENEMDRAFEMLSEMEKAGLEV 281
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 97/217 (44%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
A+ E ++ + +I GYGK ++ NA + MK G VT ++ + +A
Sbjct: 168 AMRREGIHPSMVTFNLLIDGYGKAGKMSNALHFFNQMKAAGLQPSVVTYNELIGGFCRAR 227
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A F ++K K +Y ++ A+ + +DR +L EM+ + V + Y
Sbjct: 228 DIAHAIRAFSDMKERRLAPTKVTYTILIGAFAKENEMDRAFEMLSEMEKAGLEVDVQSYG 287
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
LL M G A+++F+++ G+ P+ + ++I Y G S KA MRK+
Sbjct: 288 VLLHALCMEGKMMHARKLFQSMDSKGVKPNNVLYDMMIYGYGREGSSYKALRLIMEMRKS 347
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
GL P+ L + E + A + D+E G
Sbjct: 348 GLIPNVASYCLTIRLLCNEGKCQEAEALIGDMEDAGL 384
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 89/190 (46%)
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA 224
+ ++ Y ++I G+ + I +A MK R +VT T+++ ++K + A
Sbjct: 208 GLQPSVVTYNELIGGFCRARDIAHAIRAFSDMKERRLAPTKVTYTILIGAFAKENEMDRA 267
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
E E++ G +D +SYG ++ A G + L + MD++ V + +Y ++ G
Sbjct: 268 FEMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDSKGVKPNNVLYDMMIYG 327
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
Y G+S A R+ ++ +G+ P+ L I G+ Q+A +M AGL+ S
Sbjct: 328 YGREGSSYKALRLIMEMRKSGLIPNVASYCLTIRLLCNEGKCQEAEALIGDMEDAGLQTS 387
Query: 345 DKCVALILSA 354
+ ++ A
Sbjct: 388 ESICRVLFDA 397
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 102/235 (43%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I G + ++++A AM+R G VT +++ Y KAG + A F
Sbjct: 142 NVVSYNILIAGLCRHGKLKDAAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSNALHFF 201
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++K G +Y ++ + RA + +M + + Y L+ ++
Sbjct: 202 NQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRAFSDMKERRLAPTKVTYTILIGAFAKE 261
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
+ A + ++ AG+ D + +L++A M G+ A FQ+M G++P++
Sbjct: 262 NEMDRAFEMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDSKGVKPNNVLY 321
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+++ +E +AL ++++ + G + + C G +E E ++
Sbjct: 322 DMMIYGYGREGSSYKALRLIMEMRKSGLIPNVASYCLTIRLLCNEGKCQEAEALI 376
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 84/203 (41%), Gaps = 3/203 (1%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D T +V ++G++ A F+ + LG ++ +Y +++ Y G + G L+
Sbjct: 37 DVAACTALVHGCCQSGDVAEARRVFDVMPRLGVTPNEVTYTALIHGYFVRGQREMGFALV 96
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
EM V Y L+ + G + A+ +F+ + G+ + +LI
Sbjct: 97 GEMRRGGVEPNLYTYNCLVGEWCRTGEFKSARLLFDEMPLKGVVRNVVSYNILIAGLCRH 156
Query: 324 GQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEAS 383
G+ + A F+ MR+ G+ PS L++ K +++ AL F ++ G
Sbjct: 157 GKLKDAAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSNALHFFNQMKAAGLQPSVVTY 216
Query: 384 CTLAAWFKRLGVVEEVEHVLREY 406
L F R ++ H +R +
Sbjct: 217 NELIGGFCR---ARDIAHAIRAF 236
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%)
Query: 261 VLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAY 320
VL R + + + AL+ G +G+ A+RVF+ + G+TP+ LI+ Y
Sbjct: 24 VLARGTKSGDAALDVAACTALVHGCCQSGDVAEARRVFDVMPRLGVTPNEVTYTALIHGY 83
Query: 321 QMAGQSQKAYTAFQNMRKAGLEPS 344
+ GQ + + MR+ G+EP+
Sbjct: 84 FVRGQREMGFALVGEMRRGGVEPN 107
>gi|302820365|ref|XP_002991850.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
gi|300140388|gb|EFJ07112.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
Length = 425
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 96/205 (46%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I Y K +I++A L M + D TL ++ S+ G ++A E FE +K
Sbjct: 157 YTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMK 216
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G ++ S+ +M+ +AG + + EM+A+ + S + L+ +
Sbjct: 217 KSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYAS 276
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +V + ++ AG+TPD +I A+ AG KA+ F +M KAG + L++
Sbjct: 277 EAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLI 336
Query: 353 SACEKENQLNRALEFLIDLERDGFM 377
A K + A + D+++ G +
Sbjct: 337 DALVKAGRYQDARDIYFDMKKKGIL 361
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 98/237 (41%), Gaps = 9/237 (3%)
Query: 178 HGYGKKMQIQN---AENTLLAMK------RRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+ Y K IQ+ A N +LAM+ + G D + V++ KA + A + F
Sbjct: 48 NAYTYKCVIQSLVKAGNVVLAMELLDKMIKTGLEPDTLLCNVVLDGLGKANMMDEACKLF 107
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+K +G P D +Y ++ + R + +L EM+ + + Y ++ Y
Sbjct: 108 ASMKSMGCPADDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKA 167
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G E A V + + + PD LI A G+++ A F+ M+K+G+ +
Sbjct: 168 GRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSF 227
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+L C K ++ A +F+ ++E G TL R E VL+E
Sbjct: 228 NAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQE 284
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 91/235 (38%), Gaps = 35/235 (14%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
++ G GK + A +MK G D T +++ + + A F+E++ G
Sbjct: 90 VLDGLGKANMMDEACKLFASMKSMGCPADDYTYAILIRSLGRCKRDEEATLLFDEMEERG 149
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
+Y +++ Y +AG ++ V+L++M + + +L+ S G +E A
Sbjct: 150 CTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELAC 209
Query: 296 RVFE-----------------------------AIQFA------GITPDARMCALLINAY 320
+FE A QF GI P++ LIN
Sbjct: 210 EIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCL 269
Query: 321 QMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
A + +AY Q MR AGL P ++ A K + +A E D+E+ G
Sbjct: 270 GRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAG 324
>gi|255661134|gb|ACU25736.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
gi|255661138|gb|ACU25738.1| pentatricopeptide repeat-containing protein [Verbena halei]
gi|255661140|gb|ACU25739.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 426
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 106/218 (48%), Gaps = 4/218 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 213 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDR 272
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ Y +M++AY RAG++ + LL E+ + + ++ +L
Sbjct: 273 AAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDIAIHILA 331
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + + F MR G P
Sbjct: 332 G---AGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFP 388
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKE 381
+ALIL+A K ++ ++A + ++++ G + E
Sbjct: 389 DSNVIALILNAYGKLHEFDKANDVYMEMQEVGCVFSDE 426
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 101/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + M+ G + + + ++ MY + A
Sbjct: 75 FTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEAL 134
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 135 SVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 194
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + ++ Y + +KA Q M+ G+E
Sbjct: 195 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIE 251
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 252 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRL 311
Query: 403 LRE 405
L E
Sbjct: 312 LHE 314
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 101/237 (42%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 113 NTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 172
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 173 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 232
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G++
Sbjct: 233 LEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLY 292
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE V R+
Sbjct: 293 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAG----AGRIEEATWVFRQ 345
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ A + L M++ D V + ++ + K + A F +K
Sbjct: 12 YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 71
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +M+ + +A + L+ EM V + Y LL Y N
Sbjct: 72 RSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFL 131
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF ++ D C ++I+ Y G +++A F MRK G+EP+
Sbjct: 132 EALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 32/172 (18%), Positives = 76/172 (44%), Gaps = 2/172 (1%)
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
D+ +Y +++ + + G+ D L++M+ V +Y L+ + A +F
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
++ +G TPD +IN + A ++A + MR AG+ P+ + +L+ +
Sbjct: 68 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVEN 127
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRE 410
+ AL ++ ++ + + +LG+ +E + + +G+R+
Sbjct: 128 KKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF--WGMRK 177
>gi|255661144|gb|ACU25741.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 426
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 106/218 (48%), Gaps = 4/218 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 213 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDR 272
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ Y +M++AY RAG++ + LL E+ + + ++ +L
Sbjct: 273 AAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDIAIHILA 331
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + + F MR G P
Sbjct: 332 G---AGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFP 388
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKE 381
+ALIL+A K ++ ++A + ++++ G + E
Sbjct: 389 DSNVIALILNAYGKLHEFDKANDVYMEMQEVGCVFSDE 426
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 101/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + M+ G + + + ++ MY + A
Sbjct: 75 FMPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEAL 134
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 135 SVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 194
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + ++ Y + +KA Q M+ G+E
Sbjct: 195 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIE 251
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 252 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRL 311
Query: 403 LRE 405
L E
Sbjct: 312 LHE 314
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 101/237 (42%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 113 NTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 172
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 173 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 232
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G++
Sbjct: 233 LEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLY 292
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE V R+
Sbjct: 293 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAG----AGRIEEATWVFRQ 345
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ A + L M++ D V + ++ + K + A F +K
Sbjct: 12 YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 71
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +M+ + +A + L+ EM V + Y LL Y N
Sbjct: 72 RSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFL 131
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF ++ D C ++I+ Y G +++A F MRK G+EP+
Sbjct: 132 EALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/172 (18%), Positives = 75/172 (43%), Gaps = 2/172 (1%)
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
D+ +Y +++ + + G+ D L++M+ V +Y L+ + A +F
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
++ +G PD +IN + A ++A + MR AG+ P+ + +L+ +
Sbjct: 68 SRLKRSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVEN 127
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRE 410
+ AL ++ ++ + + +LG+ +E + + +G+R+
Sbjct: 128 KKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF--WGMRK 177
>gi|255661132|gb|ACU25735.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 426
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 106/218 (48%), Gaps = 4/218 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 213 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDR 272
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ Y +M++AY RAG++ + LL E+ + + ++ +L
Sbjct: 273 AAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDIAIHILA 331
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + + F MR G P
Sbjct: 332 G---AGRIEEATWVFRQAIDAGEVKDIXVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFP 388
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKE 381
+ALIL+A K ++ ++A + ++++ G + E
Sbjct: 389 DSNVIALILNAYGKLHEFDKANDVYMEMQEVGCVFSDE 426
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 101/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + M+ G + + + ++ MY + A
Sbjct: 75 FTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENRKFLEAL 134
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 135 SVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 194
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + ++ Y + +KA Q M+ G+E
Sbjct: 195 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIE 251
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 252 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRL 311
Query: 403 LRE 405
L E
Sbjct: 312 LHE 314
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 101/237 (42%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 113 NTASYSTLLTMYVENRKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 172
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 173 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 232
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G++
Sbjct: 233 LEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLY 292
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE V R+
Sbjct: 293 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAG----AGRIEEATWVFRQ 345
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ A + L M++ D V + ++ + K + A F +K
Sbjct: 12 YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 71
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +M+ + +A + L+ EM V + Y LL Y N
Sbjct: 72 RSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENRKFL 131
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF ++ D C ++I+ Y G +++A F MRK G+EP+
Sbjct: 132 EALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 32/172 (18%), Positives = 76/172 (44%), Gaps = 2/172 (1%)
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
D+ +Y +++ + + G+ D L++M+ V +Y L+ + A +F
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
++ +G TPD +IN + A ++A + MR AG+ P+ + +L+ +
Sbjct: 68 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVEN 127
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRE 410
+ AL ++ ++ + + +LG+ +E + + +G+R+
Sbjct: 128 RKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF--WGMRK 177
>gi|413925246|gb|AFW65178.1| hypothetical protein ZEAMMB73_703358 [Zea mays]
Length = 572
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 97/198 (48%), Gaps = 15/198 (7%)
Query: 161 LLEESFEA-NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+LE EA ++ + ++ GY + ++ NA M RR + + + MV Y+ AG
Sbjct: 150 VLESCAEAADVVSWNTVVAGYARCGELGNARRAFDGMPRR----NGASWSAMVGAYAAAG 205
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
L +A + F+ G + ++ SMV R G+L + EM A+ + +
Sbjct: 206 QLDVARDMFDRAPAAGRSV--VTWNSMVAGLARHGLLPLARKMFDEMPARNLVS----WN 259
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
A++RGY++NG+ +GA+ +F+A+ D +++ Y AG+ +A F+ M+
Sbjct: 260 AMVRGYAVNGDVDGARELFDAMP----EKDVVSWTCMVSGYARAGRHAQALELFRTMQSG 315
Query: 340 GLEPSDKCVALILSACEK 357
+ P++ + + SAC +
Sbjct: 316 DVRPNEVTMVSVFSACAR 333
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 41/211 (19%), Positives = 85/211 (40%), Gaps = 7/211 (3%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L + E ++ +T ++ GY + + A M+ ++VT+ + ++
Sbjct: 277 LFDAMPEKDVVSWTCMVSGYARAGRHAQALELFRTMQSGDVRPNEVTMVSVFSACARLAA 336
Query: 221 LKMAEETFEEIKLLGEPLDK--RSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
LK I G LD +++ Y + G D + R +D + V +
Sbjct: 337 LKEGRWAHAFIGKRGMVLDDGFNLGAALIDMYAKCGRPDVAAKVFRSLDRKNV----SAW 392
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
AL+ G + NG++ VFE ++ + PD+ ++ A AG + F++M
Sbjct: 393 NALIAGLAANGDARRCIDVFEQMKVSDEKPDSVTFVSVLAACARAGLVDEGRRCFRSMSS 452
Query: 339 A-GLEPSDKCVALILSACEKENQLNRALEFL 368
G++P K ++ + ++ A E +
Sbjct: 453 GFGVQPELKHYGCMVDLLGRAGLVDEAEELV 483
>gi|255661154|gb|ACU25746.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 426
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 106/218 (48%), Gaps = 4/218 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 213 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDR 272
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ Y +M++AY RAG++ + LL E+ + + ++ +L
Sbjct: 273 AAMLFQKLRSXGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDIAIHILA 331
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + + F MR G P
Sbjct: 332 G---AGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFP 388
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKE 381
+AL+L+A K ++ ++A + ++++ G + E
Sbjct: 389 DSNVIALVLNAYGKLHEFDKANDVYMEMQEVGCVFSDE 426
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 101/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + M+ G + + + ++ MY + A
Sbjct: 75 FTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEAL 134
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 135 SIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 194
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + ++ Y + +KA Q M+ G+E
Sbjct: 195 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIE 251
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 252 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSXGVDIDQVLYQTMIVAYERAGLVAHAKRL 311
Query: 403 LRE 405
L E
Sbjct: 312 LHE 314
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 100/237 (42%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 113 NTASYSTLLTMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 172
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 173 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 232
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R G++
Sbjct: 233 LEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSXGVDIDQVLY 292
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE V R+
Sbjct: 293 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAG----AGRIEEATWVFRQ 345
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 74/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ A + L M++ D V + ++ + K + A F +K
Sbjct: 12 YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYXKAISIFSRLK 71
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +M+ + +A + L+ EM V + Y LL Y N
Sbjct: 72 RSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFL 131
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A +F ++ D C ++I+ Y G +++A F MRK G+EP+
Sbjct: 132 EALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 32/172 (18%), Positives = 76/172 (44%), Gaps = 2/172 (1%)
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
D+ +Y +++ + + G+ D L++M+ V +Y L+ + A +F
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYXKAISIF 67
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
++ +G TPD +IN + A ++A + MR AG+ P+ + +L+ +
Sbjct: 68 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVEN 127
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRE 410
+ AL ++ ++ + + +LG+ +E + + +G+R+
Sbjct: 128 KKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF--WGMRK 177
>gi|255661162|gb|ACU25750.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 426
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 106/218 (48%), Gaps = 4/218 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 213 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDR 272
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ Y +M++AY RAG++ + LL E+ + + ++ +L
Sbjct: 273 AAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDIAIHILA 331
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + + F MR G P
Sbjct: 332 G---AGRXEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFP 388
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKE 381
+AL+L+A K ++ ++A + ++++ G + E
Sbjct: 389 DSNVIALVLNAYGKLHEFDKANDVYMEMQEVGCVFSDE 426
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 101/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + M+ G + + + ++ MY + A
Sbjct: 75 FTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEAL 134
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 135 SVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 194
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + ++ Y + +KA Q M+ G+E
Sbjct: 195 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIE 251
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 252 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRL 311
Query: 403 LRE 405
L E
Sbjct: 312 LHE 314
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 90/205 (43%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 113 NTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 172
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 173 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 232
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G++
Sbjct: 233 LEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLY 292
Query: 349 ALILSACEKENQLNRALEFLIDLER 373
++ A E+ + A L +L+R
Sbjct: 293 QTMIVAYERAGLVAHAKRLLHELKR 317
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ A + L M++ D V + ++ + K + A F +K
Sbjct: 12 YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 71
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +M+ + +A + L+ EM V + Y LL Y N
Sbjct: 72 RSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFL 131
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF ++ D C ++I+ Y G +++A F MRK G+EP+
Sbjct: 132 EALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 32/172 (18%), Positives = 76/172 (44%), Gaps = 2/172 (1%)
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
D+ +Y +++ + + G+ D L++M+ V +Y L+ + A +F
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
++ +G TPD +IN + A ++A + MR AG+ P+ + +L+ +
Sbjct: 68 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVEN 127
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRE 410
+ AL ++ ++ + + +LG+ +E + + +G+R+
Sbjct: 128 KKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF--WGMRK 177
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 112/256 (43%), Gaps = 5/256 (1%)
Query: 155 QVAELALLEESFEA-----NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLT 209
Q E LL E +A ++ Y+ +I+ G+ + + A + M+ +G + T
Sbjct: 24 QCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYN 83
Query: 210 VMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQ 269
+V KAG A E++ G D R+Y ++ +AG L L EM +
Sbjct: 84 TLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRER 143
Query: 270 EVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
+ Y +L+ G G S+ A + E ++ G PD + LI G++ KA
Sbjct: 144 GCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKA 203
Query: 330 YTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAW 389
+ FQ M++ G +P ++ A K +++ ALE L +++ G G L A
Sbjct: 204 FKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAG 263
Query: 390 FKRLGVVEEVEHVLRE 405
F ++G + E ++L E
Sbjct: 264 FGKVGDLVEAYNLLDE 279
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 94/223 (42%), Gaps = 4/223 (1%)
Query: 159 LALLEESFEANIR----DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
L LL+E E ++ Y +I G+GK + A N L MKR G D VT + ++
Sbjct: 239 LELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITG 298
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
KA L A + ++++ G P D +Y +++ +AG+L+ L M ++
Sbjct: 299 LIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPD 358
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
Y L+ E A +FE ++ GI PD +I AGQ A F
Sbjct: 359 VVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFS 418
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
MR GL P L++ + + A + D++ G +
Sbjct: 419 EMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLL 461
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+T ++ GK ++ +A L MK RG VT ++ + K G+L A +E+K
Sbjct: 222 FTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMK 281
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y ++ ++A LD +L++M+ + + Y L+ G G
Sbjct: 282 RNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLN 341
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A R+F+ ++ G PD + LI A A + + A F+ M G++P I+
Sbjct: 342 DAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSII 401
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
+ K Q++ A ++ G
Sbjct: 402 TVLGKAGQVDDADRLFSEMRGKGL 425
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 5/213 (2%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
L+ ++ E + ++F Y +I+G GK + Q A L M+R G D +T + +
Sbjct: 136 LFAEMRERGCVPDTFT-----YNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSL 190
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ K G A + F+E+K G D ++ +++ A +AG +D LL EM + V
Sbjct: 191 ITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGV 250
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
G Y AL+ G+ G+ A + + ++ G PD + LI A Q +A
Sbjct: 251 KPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQ 310
Query: 332 AFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
+ M K G P +++ K LN A
Sbjct: 311 VLKKMEKEGCPPDTITYNTLINGLGKAGLLNDA 343
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 96/212 (45%)
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA 224
+ ++ Y II GK Q+ +A+ M+ +G D +T + + G K A
Sbjct: 389 GIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEA 448
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
+ FE++K G D +Y ++++ + +D LL+E+ Q S + L
Sbjct: 449 RKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEI 508
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
+ GN + A + + G+ P A LI+A AG+ +A+ +++++ G +P
Sbjct: 509 LTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPD 568
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDGF 376
+ ++SA + Q++ A E L ++ + G
Sbjct: 569 IVSYSSLISALGQTGQIDTAFELLEEMSKRGL 600
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 95/237 (40%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y+ +I G GK + A MKRRG D +T T ++ KAG + A E
Sbjct: 183 DVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELL 242
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+K G +Y +++ + + G L LL EM Y L+ G
Sbjct: 243 DEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKA 302
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
+ A +V + ++ G PD LIN AG A F M+ G P
Sbjct: 303 SQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTY 362
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ +++A K ++ A ++E G C++ + G V++ + + E
Sbjct: 363 STLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSE 419
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 90/207 (43%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++R Y +I GK ++ A M+ RG + D T ++ K G + A E
Sbjct: 113 DVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELL 172
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
EE++ G P D +Y S++ + G + L +EM + S + AL+
Sbjct: 173 EEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKA 232
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A + + ++ G+ P LI + G +AY M++ G +P
Sbjct: 233 GRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTY 292
Query: 349 ALILSACEKENQLNRALEFLIDLERDG 375
+ +++ K +QL+ A + L +E++G
Sbjct: 293 SCLITGLIKASQLDEACQVLKKMEKEG 319
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 108/240 (45%), Gaps = 8/240 (3%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y+ +I G K Q+ A L M++ G D +T ++ KAG L A F
Sbjct: 288 DVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLF 347
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ +K G D +Y +++ A +A ++ VL EM++ + Y +++
Sbjct: 348 DRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKA 407
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A R+F ++ G++PD +N+ G+ ++A F++M+++GL P
Sbjct: 408 GQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATY 467
Query: 349 ALILSACEKENQLNRALEFLIDLERDG--FMVGKEASC--TLAAWFKRLGVVEEVEHVLR 404
+L K +++ A L +L G F K C L +W G V+E +L+
Sbjct: 468 DALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSW----GNVDEAHELLQ 523
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 89/207 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y ++ GK Q A L M+ G + D T ++ KAG L A F
Sbjct: 78 NLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLF 137
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++ G D +Y S++ + G + LL EM+ Y +L+ G +
Sbjct: 138 AEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKD 197
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A ++F+ ++ G PD+ L++A AG+ A M++ G++P
Sbjct: 198 GETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTY 257
Query: 349 ALILSACEKENQLNRALEFLIDLERDG 375
+++ K L A L +++R+G
Sbjct: 258 NALIAGFGKVGDLVEAYNLLDEMKRNG 284
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 76/170 (44%)
Query: 206 VTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLRE 265
VT ++ +KAG + A+ FEE+K D SY ++ + RAG + ++ E
Sbjct: 10 VTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAE 69
Query: 266 MDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQ 325
M A+ Y L+ G + A R+ ++ G PD R LI+ AG+
Sbjct: 70 MQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGR 129
Query: 326 SQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+A+T F MR+ G P ++ K + +A+E L ++ER G
Sbjct: 130 LSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHG 179
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 93/235 (39%), Gaps = 3/235 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +++ K Q + A+ +K + D V+ + ++ +AG + A E
Sbjct: 8 NVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVV 67
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++ G + +Y ++V +AG D LL EM Y L+
Sbjct: 68 AEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKA 127
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G A +F ++ G PD LI G+SQKA + M + G P
Sbjct: 128 GRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTY 187
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+ +++ K+ + +A + +++R G K S T A LG V+ L
Sbjct: 188 SSLITGLGKDGETVKAFKLFQEMKRRGR---KPDSITFTALMDALGKAGRVDDAL 239
>gi|413952776|gb|AFW85425.1| chloroplast RNA splicing4 [Zea mays]
Length = 1435
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 99/212 (46%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L+E+ F + Y +++ + K+ + E+T + + GF +++T M+ MY K G
Sbjct: 354 LVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGR 413
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L +A ++E++ +G D +Y M+ + + + +L +M + + A
Sbjct: 414 LDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSA 473
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ Y+ G A+ F+ + +G+ PD ++++ + +G ++K ++ M
Sbjct: 474 LICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKMLCLYRKMMNDN 533
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLE 372
P D ++L A KE++ E + D+E
Sbjct: 534 YRPDDDMYQVLLVALAKEDKCEEIEEVIQDME 565
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 98/242 (40%), Gaps = 35/242 (14%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I + ++ E + M+ GF D L ++ MY+ AGN + +
Sbjct: 884 NMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVY 943
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL------ 282
I G D+ +Y ++++ Y R+ + G LL EM + + + YK+LL
Sbjct: 944 RSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKA 1003
Query: 283 ---------------RGYSMN--------------GNSEGAQRVFEAIQFAGITPDARMC 313
+ Y +N GN A+ + ++ GI P
Sbjct: 1004 ELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATM 1063
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
+L+ +Y AGQ ++A N++ + LE S + + A K N L++++R
Sbjct: 1064 HILMTSYGTAGQPREAENVLNNLKSSSLEVSTLPYSTVFDAYLKNGDYNHGTTKLLEMKR 1123
Query: 374 DG 375
DG
Sbjct: 1124 DG 1125
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 97/236 (41%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ +G+ + + AE + +GF+ D +T ++ ++K GN+ E T E++
Sbjct: 331 YNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLV 390
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G ++ +Y +M+ Y + G LD L EM A + Y ++
Sbjct: 391 KAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIA 450
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +V E + AG+ P + LI AY G+ A F M +G++P ++L
Sbjct: 451 EAGKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVML 510
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGL 408
+ + L + D + + L + EE+E V+++ L
Sbjct: 511 DVFARSGDTEKMLCLYRKMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEVIQDMEL 566
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 81/188 (43%)
Query: 189 AENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVM 248
A + L +++ G D +T ++ S++ NL+ A FE++ D +Y +MV
Sbjct: 277 ALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVS 336
Query: 249 AYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITP 308
+ R G + E L RE+ + + Y +LL ++ GN + + E + AG
Sbjct: 337 VHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKK 396
Query: 309 DARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFL 368
+ +I+ Y G+ A + MR G P +++ + K N++ A + L
Sbjct: 397 NEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVL 456
Query: 369 IDLERDGF 376
D+ G
Sbjct: 457 EDMTDAGL 464
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 80/180 (44%), Gaps = 2/180 (1%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK--MAE 225
A ++ + ++ Y + + +A L M RG D V+ ++ SK+G L +A
Sbjct: 219 ATVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVAL 278
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+ E++ G D +Y +++ A ++ L+ + +M A E Y A++ +
Sbjct: 279 DLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVH 338
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
G +E A+R+F + G PDA L+ A+ G K + + KAG + ++
Sbjct: 339 GRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNE 398
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 84/217 (38%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
++LE E + Y +I Y + + + L M +RG + ++ +KA
Sbjct: 945 SILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAE 1004
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ A++ FEE++ L++ Y M+ Y AG + E LL M +
Sbjct: 1005 LREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMH 1064
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ Y G A+ V ++ + + + + +AY G T M++
Sbjct: 1065 ILMTSYGTAGQPREAENVLNNLKSSSLEVSTLPYSTVFDAYLKNGDYNHGTTKLLEMKRD 1124
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
G+EP + + A Q A+ L L+ GF
Sbjct: 1125 GVEPDHQVWTCFIRAASLCEQTADAILLLKSLQDCGF 1161
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 94/219 (42%), Gaps = 3/219 (1%)
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
F + T+ +++ ++KAG++ + + +K G + Y SM+
Sbjct: 845 NFKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDV 904
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
E+++ EM+ + ALL Y+ GN + +V+ +I AG+ PD LI
Sbjct: 905 ELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVM 964
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
Y + + ++ +T M K GL P + +L+A K +A + ++ + +
Sbjct: 965 YCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLN 1024
Query: 380 KEASCTLAAWFKRLGVVEEVEH---VLREYGLRETYSKI 415
+ + ++ G + E+ V++E G+ T + +
Sbjct: 1025 RSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATM 1063
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 82/198 (41%), Gaps = 6/198 (3%)
Query: 208 LTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMD 267
+ V++ + +A +AEE F ++ GE + + +M+ Y R+G D LL M
Sbjct: 191 VAVVLGVLGRARQDSIAEEVF--LRFAGEGATVQVFNAMMGVYARSGRFDDARQLLDTMH 248
Query: 268 AQEVYVGSEVYKALLRGYSMNGNSEGA---QRVFEAIQFAGITPDARMCALLINAYQMAG 324
+ + + L+ S +G +FE Q +G+ PD LI+A +
Sbjct: 249 DRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQ-SGLRPDVITYNTLISACSQSS 307
Query: 325 QSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASC 384
+ A T F++M + P ++S + + A +L GFM
Sbjct: 308 NLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYN 367
Query: 385 TLAAWFKRLGVVEEVEHV 402
+L F + G V++VEH
Sbjct: 368 SLLYAFAKEGNVDKVEHT 385
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 89/216 (41%), Gaps = 4/216 (1%)
Query: 181 GKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDK 240
G+ Q AE L G M+ +Y+++G A + + + G D
Sbjct: 199 GRARQDSIAEEVFLRFAGEGATVQ--VFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDL 256
Query: 241 RSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV--YKALLRGYSMNGNSEGAQRVF 298
S+ +++ A ++G L G L + ++ + +V Y L+ S + N E A VF
Sbjct: 257 VSFNTLINARSKSGCLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVF 316
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
E + + PD +++ + G++++A F+ + + G P +L A KE
Sbjct: 317 EDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKE 376
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
+++ L + GF + T+ + ++G
Sbjct: 377 GNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMG 412
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 33/174 (18%), Positives = 74/174 (42%), Gaps = 2/174 (1%)
Query: 170 IRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFE 229
++ Y ++ K + A+ M+ + + ++ +M+ +Y AGN AE
Sbjct: 990 LQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLA 1049
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
+K G + ++ +Y AG E +L + + + V + Y + Y NG
Sbjct: 1050 VMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVSTLPYSTVFDAYLKNG 1109
Query: 290 N-SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
+ + G ++ E ++ G+ PD ++ I A + Q+ A ++++ G +
Sbjct: 1110 DYNHGTTKLLE-MKRDGVEPDHQVWTCFIRAASLCEQTADAILLLKSLQDCGFD 1162
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 80/216 (37%), Gaps = 37/216 (17%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
II YGK Q AE + +++ I D+ ++ Y+++G + A F+ + G
Sbjct: 752 IIEAYGKIKLWQQAEILVKGLRQASGI-DRRIWNALIHAYAESGLYEKARAVFDNMIKTG 810
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
S M+ A + G LD V++ E+ + LL ++ G+
Sbjct: 811 PLPTVDSVNGMMRALIVDGRLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFEVM 870
Query: 296 RVFEAIQFAG-----------------------------------ITPDARMCALLINAY 320
+++ ++ AG PD + L+N Y
Sbjct: 871 KIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMY 930
Query: 321 QMAGQSQKAYTAFQNMRKAGLEPS-DKCVALILSAC 355
AG + ++++ +AGLEP D LI+ C
Sbjct: 931 TAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYC 966
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 110/261 (42%), Gaps = 6/261 (2%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+LE+ ++ Y I++G K+ + A+ M RG D T T ++ Y K GN
Sbjct: 559 MLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGN 618
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A FE + D +Y +++ + + +++ L +M ++ +Y Y
Sbjct: 619 MNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGI 678
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ GY G A R+++ + G C ++ Y AG + KA NM G
Sbjct: 679 LINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKG 738
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+ P +++ KE ++RA + +E G + + F R G ++E E
Sbjct: 739 IVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAE 798
Query: 401 HVLR---EYGL---RETYSKI 415
++ E G+ R TY+ +
Sbjct: 799 LIMLKMIERGVNPDRSTYTSL 819
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 75/174 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+GY + A M +GF +T +V Y +AGN A+E +
Sbjct: 676 YGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNML 735
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
L G D +Y +++ +++ +DR L+ +M+ + Y +L G+S G +
Sbjct: 736 LKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQ 795
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
A+ + + G+ PD LIN + ++A+ M + G P DK
Sbjct: 796 EAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDDK 849
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 77/361 (21%), Positives = 147/361 (40%), Gaps = 37/361 (10%)
Query: 17 QVFDEITAPKPGLRLSWRNLSLHRKPAKWSRSLRSGPA--LEAIKAEDMGKTQVKDDTSM 74
+ D IT+ P + S ++ S SR L A L ++ + + ++ + + +
Sbjct: 220 RFIDSITSNCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVE-SLV 278
Query: 75 FTWIQIGPN------ITEEQKQAISQFPRKMTKRCKAF---VKQIICVSPETGNLSDLLA 125
T+ G N + QA RK+ + C+AF + +CVS N LL
Sbjct: 279 LTYGNCGSNPLVFDLLVRTYVQA-----RKLREGCEAFRVLKSKGLCVSINACN--SLLG 331
Query: 126 AWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQ 185
V+ W+ + +Y +V + + N+ +I+ K +
Sbjct: 332 GLVK------VGWVD-------LAWEIYQEV-----VRSGVQVNVYTLNIMINALCKNQK 373
Query: 186 IQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGS 245
I+N ++ L M+ +G D VT ++ Y + G L+ A E + + G +Y +
Sbjct: 374 IENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNA 433
Query: 246 MVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAG 305
++ + G R + +L EM + + Y LL N N A+R+F+ + G
Sbjct: 434 IINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQG 493
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
+ PD + LI G +A F++M+ AGL P + +++ + ++ AL
Sbjct: 494 VVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEAL 553
Query: 366 E 366
+
Sbjct: 554 K 554
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 67/159 (42%)
Query: 185 QIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYG 244
+ +AE M +G + D V+ + ++ + SK G L A + F ++K G D Y
Sbjct: 478 NMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYT 537
Query: 245 SMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFA 304
++ + R G++ + EM Q + Y +L G A +F +
Sbjct: 538 ILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTER 597
Query: 305 GITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G+ PD LIN Y G KA T F+ M + L+P
Sbjct: 598 GVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKP 636
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 83/208 (39%)
Query: 198 RRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLD 257
R G + TL +M+ K ++ + +++ G D +Y +++ AY R G+L+
Sbjct: 351 RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLE 410
Query: 258 RGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
L+ M + + Y A++ G G A+ V + + G++PD +L+
Sbjct: 411 EAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILL 470
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
A F M G+ P + ++ K L++AL++ D++ G
Sbjct: 471 VECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLA 530
Query: 378 VGKEASCTLAAWFKRLGVVEEVEHVLRE 405
L F R GV+ E V E
Sbjct: 531 PDNVIYTILIGGFCRNGVMSEALKVRDE 558
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/199 (20%), Positives = 81/199 (40%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
MK G D V T+++ + + G + A + +E+ G LD +Y +++ + M
Sbjct: 524 MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKM 583
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
L + L EM + V+ + L+ GY +GN A +FE + + PD
Sbjct: 584 LSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNT 643
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
LI+ + + +K + +M + P+ ++++ ++ A ++ G
Sbjct: 644 LIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKG 703
Query: 376 FMVGKEASCTLAAWFKRLG 394
F T+ + R G
Sbjct: 704 FEATIITCNTIVKGYCRAG 722
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 68/152 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E+ FEA I I+ GY + A+ L M +G + D +T ++ + K N
Sbjct: 699 MVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEEN 758
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A +++ G D +Y ++ + R G + E+++ +M + V Y +
Sbjct: 759 MDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTS 818
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARM 312
L+ G+ N + A RV + + G PD +
Sbjct: 819 LINGHVTQNNLKEAFRVHDEMLQRGFVPDDKF 850
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 87/213 (40%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E+ ++ Y +I+ Y ++ ++ A + +M +G T ++ K G
Sbjct: 386 EKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYL 445
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A+ +E+ +G D +Y +++ R + E + EM +Q V + AL+
Sbjct: 446 RAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALI 505
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
S NG + A + F ++ AG+ PD + +LI + G +A M + G
Sbjct: 506 GLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCX 565
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDG 375
IL+ KE L+ A E ++ G
Sbjct: 566 LDVVTYNTILNGLCKEKMLSEADELFTEMTERG 598
>gi|255661200|gb|ACU25769.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
venustus]
Length = 426
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 4/212 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M RG D +T + ++ ++ K G L
Sbjct: 213 KNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHNRGIEPDAITYSTIISIWGKVGKLDR 272
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ Y +M++AY RAG++ + LL E+ + + + +L
Sbjct: 273 AAMLFQKLRSSGVEIDQILYQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDTAIHILA 331
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +IN + + F+ MR G P
Sbjct: 332 G---AGRIEEATWVFRQAIDAGEVKDITVFERMINLFSKYKKYSNVVEVFEKMRGLGYFP 388
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDG 375
+AL+L+A K + +A + +++ +G
Sbjct: 389 DSNVIALVLNAYGKLREFEKANDAYTEMQDEG 420
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 97/236 (41%), Gaps = 6/236 (2%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+ +GK + A + + M+ G + D V+ + ++ MY + A F E++
Sbjct: 82 YNSMINVFGKAKLFREARSLISEMRMAGIMPDTVSYSTLLTMYVENQKFLEALSVFAEMR 141
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ L+ + M+ Y + M + L M + Y LLR Y G++E
Sbjct: 142 EIKCLLNLITCNVMIDVYGQLDMAKEADKLFWGMRKXGIEPNVVSYNTLLRVY---GDAE 198
Query: 293 ---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
A +F +Q I + ++ Y + +KA Q M G+EP +
Sbjct: 199 LFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHNRGIEPDAITYS 258
Query: 350 LILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
I+S K +L+RA L G + + T+ ++R G+V + +L E
Sbjct: 259 TIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILYQTMIVAYERAGLVAHAKRLLHE 314
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 97/233 (41%), Gaps = 4/233 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ ++ Y + + A + M+ + + +T VM+ +Y + K A++ F ++
Sbjct: 117 YSTLLTMYVENQKFLEALSVFAEMREIKCLLNLITCNVMIDVYGQLDMAKEADKLFWGMR 176
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + SY +++ Y A + L R M + + Y ++ Y E
Sbjct: 177 KXGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHE 236
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + + GI PDA + +I+ + G+ +A FQ +R +G+E ++
Sbjct: 237 KANNLIQEMHNRGIEPDAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILYQTMI 296
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
A E+ + A L +L+R + A LA G +EE V R+
Sbjct: 297 VAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAG----AGRIEEATWVFRQ 345
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ +A + L M++ D V + ++ + K + A F +K
Sbjct: 12 YSTLITYFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDFSKAISIFSRLK 71
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y SM+ + +A + L+ EM + + Y LL Y N
Sbjct: 72 RSGITPDLVAYNSMINVFGKAKLFREARSLISEMRMAGIMPDTVSYSTLLTMYVENQKFL 131
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF ++ + C ++I+ Y +++A F MRK G+EP+
Sbjct: 132 EALSVFAEMREIKCLLNLITCNVMIDVYGQLDMAKEADKLFWGMRKXGIEPN 183
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 59/133 (44%)
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
DK +Y +++ + + G+ D L++M+ V +Y L+ + A +F
Sbjct: 8 DKYTYSTLITYFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDFSKAISIF 67
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
++ +GITPD +IN + A ++A + MR AG+ P + +L+ +
Sbjct: 68 SRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRMAGIMPDTVSYSTLLTMYVEN 127
Query: 359 NQLNRALEFLIDL 371
+ AL ++
Sbjct: 128 QKFLEALSVFAEM 140
>gi|357159753|ref|XP_003578548.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Brachypodium distachyon]
Length = 460
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 91/203 (44%)
Query: 208 LTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMD 267
+ V + ++G+L+ AE + LLG P D +Y +++ A+ RA LD G +LR M
Sbjct: 13 MNVCLAALCRSGSLERAESVLIDAILLGMPPDVVTYNTLLAAHCRAAGLDAGFAVLRRMR 72
Query: 268 AQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQ 327
V+ + Y +L+ S G + A +F+ + AGI PDA +L++ +G +
Sbjct: 73 EAGVWPNAVTYNSLIVAASRVGLTMRALDLFDEMLRAGIAPDAWSYNVLMHCLFRSGHPE 132
Query: 328 KAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLA 387
AY F +M + G+ P +L K A L+R G VG T+
Sbjct: 133 DAYRVFADMAEKGVTPCTTTYNTLLDGLFKAGHATNAYRMFRYLQRVGLPVGIVTYNTMI 192
Query: 388 AWFKRLGVVEEVEHVLREYGLRE 410
R G V +LRE G E
Sbjct: 193 NGLCRSGKVGYARMILRELGRTE 215
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 105/266 (39%), Gaps = 4/266 (1%)
Query: 154 LQVAELALLEESFEANIR----DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLT 209
L + L L +E A I Y ++H + ++A M +G T
Sbjct: 95 LTMRALDLFDEMLRAGIAPDAWSYNVLMHCLFRSGHPEDAYRVFADMAEKGVTPCTTTYN 154
Query: 210 VMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQ 269
++ KAG+ A F ++ +G P+ +Y +M+ R+G + ++LRE+
Sbjct: 155 TLLDGLFKAGHATNAYRMFRYLQRVGLPVGIVTYNTMINGLCRSGKVGYARMILRELGRT 214
Query: 270 EVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
E + Y +++ G + F ++ G PD +I+A G+ ++A
Sbjct: 215 EHTPNAVTYTTVMKCCFRYGRFDQGLETFLSLLEGGHIPDVFPYCTVISALVKKGRVEEA 274
Query: 330 YTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAW 389
+ M ++G C ++ +E +L+ A E L +E G + L
Sbjct: 275 NAYSELMIQSGSRLDTACYNTLIHLRCQEGKLDDAFELLSMMEEGGLESDEYTFSILVNG 334
Query: 390 FKRLGVVEEVEHVLREYGLRETYSKI 415
+LG +E E L +R+ S +
Sbjct: 335 LCKLGHIEAAEKQLCYMEMRDMESNV 360
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 92/230 (40%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y ++ + + + L M+ G + VT ++V S+ G A + F
Sbjct: 44 DVVTYNTLLAAHCRAAGLDAGFAVLRRMREAGVWPNAVTYNSLIVAASRVGLTMRALDLF 103
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+ G D SY ++ R+G + + +M + V + Y LL G
Sbjct: 104 DEMLRAGIAPDAWSYNVLMHCLFRSGHPEDAYRVFADMAEKGVTPCTTTYNTLLDGLFKA 163
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G++ A R+F +Q G+ +IN +G+ A + + + P+
Sbjct: 164 GHATNAYRMFRYLQRVGLPVGIVTYNTMINGLCRSGKVGYARMILRELGRTEHTPNAVTY 223
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
++ C + + ++ LE + L G + CT+ + + G VEE
Sbjct: 224 TTVMKCCFRYGRFDQGLETFLSLLEGGHIPDVFPYCTVISALVKKGRVEE 273
>gi|218197339|gb|EEC79766.1| hypothetical protein OsI_21159 [Oryza sativa Indica Group]
Length = 410
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
E +I + ++ GYGK ++ NA MK GF VT +++ + +A ++
Sbjct: 172 EGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTR 231
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A ++K G K +Y ++ ++ R + + +L M+ + V + Y L+R
Sbjct: 232 ANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVR 291
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
M GN + A+++F+++ G+ P + ++I Y G S KA MR+ GL P
Sbjct: 292 ALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIP 351
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+ L + K+++ A L D+ R G
Sbjct: 352 NSASYGLTIRVLCKDDKCQEAEALLDDMVRAGL 384
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 89/206 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT ++HGY Q + M+R G + T ++ + + G + A F+E+
Sbjct: 76 YTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMP 135
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ G + SY +++ R G L LL M + + L+ GY G
Sbjct: 136 VRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMS 195
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A F ++ AG P A +LI + A +A A +M++ GLEP+ +++
Sbjct: 196 NALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILI 255
Query: 353 SACEKENQLNRALEFLIDLERDGFMV 378
+ +EN + +A E L +E+ G V
Sbjct: 256 DSFARENHMGKAFEILAGMEKAGLEV 281
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 95/209 (45%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I G + ++ +A L M+ G +T ++V Y KAG + A F
Sbjct: 142 NVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFF 201
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++K G +Y ++ + RA + R L +M + + Y L+ ++
Sbjct: 202 NQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARE 261
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
+ A + ++ AG+ DA +L+ A M G + A FQ+M + G+EPS+
Sbjct: 262 NHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIY 321
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFM 377
+++ +E +AL+ ++++ + G +
Sbjct: 322 DMMIYGYGREGSSYKALKLIMEMRQKGLI 350
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 89/219 (40%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKL 233
T +++G K + A M G ++VT T ++ Y G + FEE++
Sbjct: 42 TALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRR 101
Query: 234 LGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEG 293
G + +Y ++ + R G +R L EM + + Y L+ G +G
Sbjct: 102 GGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWD 161
Query: 294 AQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILS 353
A ++ + ++ G P LL++ Y AG+ A F M+ AG +PS ++++
Sbjct: 162 AAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIA 221
Query: 354 ACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKR 392
+ + RA L D++ G K L F R
Sbjct: 222 GFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFAR 260
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 86/190 (45%)
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA 224
F+ + Y +I G+ + + A L MK RG +VT T+++ +++ ++ A
Sbjct: 208 GFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKA 267
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
E ++ G +D +YG +V A G + L + M + V + +Y ++ G
Sbjct: 268 FEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYG 327
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
Y G+S A ++ ++ G+ P++ L I + Q+A +M +AGL+ S
Sbjct: 328 YGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMVRAGLQTS 387
Query: 345 DKCVALILSA 354
+ +L A
Sbjct: 388 ESICQALLDA 397
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 75/189 (39%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D T +V K G++ A F+E+ LLG ++ +Y +++ Y G ++G L
Sbjct: 37 DVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALF 96
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
EM V Y L+ + G E A+ +F+ + GI + LI
Sbjct: 97 EEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRH 156
Query: 324 GQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEAS 383
G+ A MR G PS L++ K +++ AL F ++ GF
Sbjct: 157 GKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTY 216
Query: 384 CTLAAWFKR 392
L A F R
Sbjct: 217 NMLIAGFCR 225
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 85/221 (38%), Gaps = 4/221 (1%)
Query: 159 LALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
AL EE E N+ Y +I + + + + A + M RG + + V+ ++
Sbjct: 93 FALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAG 152
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
+ G L A + + ++ G ++ +V Y +AG + +M A
Sbjct: 153 LCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPS 212
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+ Y L+ G+ + A R ++ G+ P +LI+++ KA+
Sbjct: 213 AVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILA 272
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
M KAGLE +++ A E + A + + G
Sbjct: 273 GMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKG 313
>gi|414588908|tpg|DAA39479.1| TPA: chloroplast RNA splicing4 [Zea mays]
Length = 1438
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 99/212 (46%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L+E+ F + Y +++ + K+ + E+T + + GF +++T M+ MY K G
Sbjct: 354 LVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGR 413
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L +A ++E++ +G D +Y M+ + + + +L +M + + A
Sbjct: 414 LDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSA 473
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ Y+ G A+ F+ + +G+ PD ++++ + +G ++K ++ M
Sbjct: 474 LICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKMLCLYRKMMNDN 533
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLE 372
P D ++L A KE++ E + D+E
Sbjct: 534 YRPDDDMYQVLLVALAKEDKCEEIEEVIQDME 565
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 98/242 (40%), Gaps = 35/242 (14%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I + ++ E + M+ GF D L ++ MY+ AGN + +
Sbjct: 884 NMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVY 943
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL------ 282
I G D+ +Y ++++ Y R+ + G LL EM + + + YK+LL
Sbjct: 944 RSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKA 1003
Query: 283 ---------------RGYSMN--------------GNSEGAQRVFEAIQFAGITPDARMC 313
+ Y +N GN A+ + ++ GI P
Sbjct: 1004 ELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATM 1063
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
+L+ +Y AGQ ++A N++ + LE S + + A K N L++++R
Sbjct: 1064 HILMTSYGTAGQPREAENVLNNLKSSSLEVSTLPYSTVFDAYLKNGDYNHGTTKLLEMKR 1123
Query: 374 DG 375
DG
Sbjct: 1124 DG 1125
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 97/236 (41%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ +G+ + + AE + +GF+ D +T ++ ++K GN+ E T E++
Sbjct: 331 YNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLV 390
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G ++ +Y +M+ Y + G LD L EM A + Y ++
Sbjct: 391 KAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIA 450
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +V E + AG+ P + LI AY G+ A F M +G++P ++L
Sbjct: 451 EAGKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVML 510
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGL 408
+ + L + D + + L + EE+E V+++ L
Sbjct: 511 DVFARSGDTEKMLCLYRKMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEVIQDMEL 566
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 81/188 (43%)
Query: 189 AENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVM 248
A + L +++ G D +T ++ S++ NL+ A FE++ D +Y +MV
Sbjct: 277 ALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVS 336
Query: 249 AYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITP 308
+ R G + E L RE+ + + Y +LL ++ GN + + E + AG
Sbjct: 337 VHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKK 396
Query: 309 DARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFL 368
+ +I+ Y G+ A + MR G P +++ + K N++ A + L
Sbjct: 397 NEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVL 456
Query: 369 IDLERDGF 376
D+ G
Sbjct: 457 EDMTDAGL 464
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 80/180 (44%), Gaps = 2/180 (1%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK--MAE 225
A ++ + ++ Y + + +A L M RG D V+ ++ SK+G L +A
Sbjct: 219 ATVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVAL 278
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+ E++ G D +Y +++ A ++ L+ + +M A E Y A++ +
Sbjct: 279 DLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVH 338
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
G +E A+R+F + G PDA L+ A+ G K + + KAG + ++
Sbjct: 339 GRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNE 398
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 84/217 (38%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
++LE E + Y +I Y + + + L M +RG + ++ +KA
Sbjct: 945 SILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAE 1004
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ A++ FEE++ L++ Y M+ Y AG + E LL M +
Sbjct: 1005 LREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMH 1064
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ Y G A+ V ++ + + + + +AY G T M++
Sbjct: 1065 ILMTSYGTAGQPREAENVLNNLKSSSLEVSTLPYSTVFDAYLKNGDYNHGTTKLLEMKRD 1124
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
G+EP + + A Q A+ L L+ GF
Sbjct: 1125 GVEPDHQVWTCFIRAASLCEQTADAILLLKSLQDCGF 1161
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 94/218 (43%), Gaps = 3/218 (1%)
Query: 201 FICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGE 260
F + T+ +++ ++KAG++ + + +K G + Y SM+ E
Sbjct: 846 FKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVE 905
Query: 261 VLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAY 320
+++ EM+ + ALL Y+ GN + +V+ +I AG+ PD LI Y
Sbjct: 906 LMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMY 965
Query: 321 QMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGK 380
+ + ++ +T M K GL P + +L+A K +A + ++ + + +
Sbjct: 966 CRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNR 1025
Query: 381 EASCTLAAWFKRLGVVEEVEH---VLREYGLRETYSKI 415
+ ++ G + E+ V++E G+ T + +
Sbjct: 1026 SIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATM 1063
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 82/198 (41%), Gaps = 6/198 (3%)
Query: 208 LTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMD 267
+ V++ + +A +AEE F ++ GE + + +M+ Y R+G D LL M
Sbjct: 191 VAVVLGVLGRARQDSIAEEVF--LRFAGEGATVQVFNAMMGVYARSGRFDDARQLLDTMH 248
Query: 268 AQEVYVGSEVYKALLRGYSMNGNSEGA---QRVFEAIQFAGITPDARMCALLINAYQMAG 324
+ + + L+ S +G +FE Q +G+ PD LI+A +
Sbjct: 249 DRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQ-SGLRPDVITYNTLISACSQSS 307
Query: 325 QSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASC 384
+ A T F++M + P ++S + + A +L GFM
Sbjct: 308 NLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYN 367
Query: 385 TLAAWFKRLGVVEEVEHV 402
+L F + G V++VEH
Sbjct: 368 SLLYAFAKEGNVDKVEHT 385
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 89/216 (41%), Gaps = 4/216 (1%)
Query: 181 GKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDK 240
G+ Q AE L G M+ +Y+++G A + + + G D
Sbjct: 199 GRARQDSIAEEVFLRFAGEGATVQ--VFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDL 256
Query: 241 RSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV--YKALLRGYSMNGNSEGAQRVF 298
S+ +++ A ++G L G L + ++ + +V Y L+ S + N E A VF
Sbjct: 257 VSFNTLINARSKSGCLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVF 316
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
E + + PD +++ + G++++A F+ + + G P +L A KE
Sbjct: 317 EDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKE 376
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
+++ L + GF + T+ + ++G
Sbjct: 377 GNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMG 412
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 33/174 (18%), Positives = 74/174 (42%), Gaps = 2/174 (1%)
Query: 170 IRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFE 229
++ Y ++ K + A+ M+ + + ++ +M+ +Y AGN AE
Sbjct: 990 LQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLA 1049
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
+K G + ++ +Y AG E +L + + + V + Y + Y NG
Sbjct: 1050 VMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVSTLPYSTVFDAYLKNG 1109
Query: 290 N-SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
+ + G ++ E ++ G+ PD ++ I A + Q+ A ++++ G +
Sbjct: 1110 DYNHGTTKLLE-MKRDGVEPDHQVWTCFIRAASLCEQTADAILLLKSLQDCGFD 1162
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 80/216 (37%), Gaps = 37/216 (17%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
II YGK Q AE + +++ I D+ ++ Y+++G + A F+ + G
Sbjct: 752 IIEAYGKIKLWQQAEILVKGLRQASGI-DRRIWNALIHAYAESGLYEKARAVFDNMIKTG 810
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
S M+ A + G LD V++ E+ + LL ++ G+
Sbjct: 811 PLPTVDSVNGMMRALIVDGRLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFEVM 870
Query: 296 RVFEAIQFAG-----------------------------------ITPDARMCALLINAY 320
+++ ++ AG PD + L+N Y
Sbjct: 871 KIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMY 930
Query: 321 QMAGQSQKAYTAFQNMRKAGLEPS-DKCVALILSAC 355
AG + ++++ +AGLEP D LI+ C
Sbjct: 931 TAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYC 966
>gi|168025874|ref|XP_001765458.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683308|gb|EDQ69719.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 670
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 105/242 (43%), Gaps = 1/242 (0%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
+ N+ + ++ Y K + AE AM G ++V ++ Y K K
Sbjct: 424 QPNVVSWCGLLKAYQKTGNWEKAEEIFHAMLDSGCPPNEVAWCSLLSAYEKGRQWKKVLY 483
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
T E+++ LG LD ++ + + A +AG + E ++M Y +L++ Y
Sbjct: 484 TIEKLEELGMKLDVVAWSTTISALAKAGQWELAEEKFKQMTKSGCLPNIVTYSSLIKAYG 543
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR-KAGLEPSD 345
G E A+ VF+ + GI P+ + C L+ AY + +K F++M + G+EP
Sbjct: 544 DVGLWEKAESVFKLMLRVGIRPNPQACCALLRAYGKGKELEKVIIFFESMEPQYGVEPDK 603
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
A I AC + RA++++ +E G TL ++ G +++ VL
Sbjct: 604 YAYAAIFWACWTCGEWQRAVKYIDRMEMAGCTPDSVIYTTLINMYEANGQIDKAMQVLER 663
Query: 406 YG 407
G
Sbjct: 664 MG 665
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 108/278 (38%), Gaps = 42/278 (15%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E N T +I G ++ A M++ G T ++V + + A E
Sbjct: 214 EPNAYVCTTLIAALGCGRRLSQALKLFRWMEKAGIERPIFTFNALMVACGRCASGDTAVE 273
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS----------- 275
FEE++ LG D+ ++ +V A AG+ DR + + M A+ +G
Sbjct: 274 LFEEMEKLGIVPDRITFTGLVSATTAAGLWDRAQSFIDMMQARGFSIGLHEYIEMQWACA 333
Query: 276 ------------------------EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDAR 311
E Y ALL Y E A R F IQ G+TPD
Sbjct: 334 RARKPREAYGLFQVMLEQGYELKLESYNALLCAYERTAQWEDAMRTFIWIQDKGLTPDVM 393
Query: 312 MCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDL 371
+ LI+A AGQ+++A + M+ + +P+ +L A +K +A E +
Sbjct: 394 SWSSLISACANAGQAERALEVLERMKTSDCQPNVVSWCGLLKAYQKTGNWEKAEEIFHAM 453
Query: 372 ERDGFMVGKEASCTLAA-------WFKRLGVVEEVEHV 402
G + A C+L + W K L +E++E +
Sbjct: 454 LDSGCPPNEVAWCSLLSAYEKGRQWKKVLYTIEKLEEL 491
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 97/239 (40%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F + +Y ++ + + + A M +G+ + ++ Y + + A
Sbjct: 318 FSIGLHEYIEMQWACARARKPREAYGLFQVMLEQGYELKLESYNALLCAYERTAQWEDAM 377
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
TF I+ G D S+ S++ A AG +R +L M + + LL+ Y
Sbjct: 378 RTFIWIQDKGLTPDVMSWSSLISACANAGQAERALEVLERMKTSDCQPNVVSWCGLLKAY 437
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
GN E A+ +F A+ +G P+ L++AY+ Q +K + + + G++
Sbjct: 438 QKTGNWEKAEEIFHAMLDSGCPPNEVAWCSLLSAYEKGRQWKKVLYTIEKLEELGMKLDV 497
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
+ +SA K Q A E + + G + +L + +G+ E+ E V +
Sbjct: 498 VAWSTTISALAKAGQWELAEEKFKQMTKSGCLPNIVTYSSLIKAYGDVGLWEKAESVFK 556
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 93/246 (37%), Gaps = 36/246 (14%)
Query: 132 KPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAEN 191
+P W +LK + + + A+L+ N + ++ Y K Q +
Sbjct: 424 QPNVVSWCGLLKAYQKTGNWEKAEEIFHAMLDSGCPPNEVAWCSLLSAYEKGRQWKKVLY 483
Query: 192 TLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYV 251
T+ ++ G D V + + +KAG ++AEE F+++ G + +Y S++ AY
Sbjct: 484 TIEKLEELGMKLDVVAWSTTISALAKAGQWELAEEKFKQMTKSGCLPNIVTYSSLIKAYG 543
Query: 252 RAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN----------------------- 288
G+ ++ E + + M + + ALLR Y
Sbjct: 544 DVGLWEKAESVFKLMLRVGIRPNPQACCALLRAYGKGKELEKVIIFFESMEPQYGVEPDK 603
Query: 289 -------------GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
G + A + + ++ AG TPD+ + LIN Y+ GQ KA +
Sbjct: 604 YAYAAIFWACWTCGEWQRAVKYIDRMEMAGCTPDSVIYTTLINMYEANGQIDKAMQVLER 663
Query: 336 MRKAGL 341
M L
Sbjct: 664 MGSGSL 669
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%)
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
N A +VF A + AG+ P+A +C LI A + +A F+ M KAG+E
Sbjct: 197 NWYAATKVFRAFRSAGVEPNAYVCTTLIAALGCGRRLSQALKLFRWMEKAGIERPIFTFN 256
Query: 350 LILSACEKENQLNRALEFLIDLERDGFM 377
++ AC + + A+E ++E+ G +
Sbjct: 257 ALMVACGRCASGDTAVELFEEMEKLGIV 284
>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 942
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 113/259 (43%), Gaps = 12/259 (4%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
+Y Q+ L +L + F YT +++ Y K+ ++ A N + M+R + VT +
Sbjct: 243 VYEQMIALGILPDIFS-----YTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSL 297
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ Y G++ A++ + G P + R+Y ++ Y + G +++ E L+ M + +
Sbjct: 298 IDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNL 357
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
+V VY L+ Y G + A R+ +A+ G+ + +C LIN Y G KA
Sbjct: 358 FVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAE 417
Query: 332 AFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG--FMVGKEASCTLAAW 389
+M+ L+P +L K+ +A + ++ G F V T
Sbjct: 418 VLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTV-----VTYNTL 472
Query: 390 FKRLGVVEEVEHVLREYGL 408
K L V VEH L + L
Sbjct: 473 LKNLFHVGHVEHALHIWNL 491
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 85/202 (42%), Gaps = 15/202 (7%)
Query: 175 KIIHGYGKK-MQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKL 233
KI+ +GKK M I I + + + + K+ N+ ++ L
Sbjct: 729 KIVDSFGKKAMSIP--------------ISNNIVYNIAITGLCKSKNIDDVRRILSDLLL 774
Query: 234 LGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEG 293
G D +Y S++ A G ++ L +M + VY AL+ G +GN +
Sbjct: 775 KGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDR 834
Query: 294 AQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILS 353
A+R+F + G++P LI+ Y G++ +A MR+ G+ PS + ++
Sbjct: 835 ARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIH 894
Query: 354 ACEKENQLNRALEFLIDLERDG 375
E + +++ L ++ + G
Sbjct: 895 GLYMEGKSEQSVGLLNEMMKAG 916
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 81/182 (44%), Gaps = 2/182 (1%)
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL 221
L + F +I Y +I G+ K ++ A+ L MK GF D++T ++ Y K GNL
Sbjct: 528 LSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNL 587
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
A + + + G Y S++ R+ L + LL EM +E+ Y +L
Sbjct: 588 VEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSL 647
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+ G+ G + A + + GI P+ + + ++++ G+ +A + A +
Sbjct: 648 IAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQI--ADI 705
Query: 342 EP 343
+P
Sbjct: 706 DP 707
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/217 (19%), Positives = 86/217 (39%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
++E++ + Y +IH Y ++ +A AM + G + V ++ Y K G
Sbjct: 351 CMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLG 410
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A E +K D Y +++ + + + L EM + V Y
Sbjct: 411 HVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYN 470
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
LL+ G+ E A ++ + G+ P+ L++A+ G +A +++
Sbjct: 471 TLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSK 530
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
G S ++ K +L +A E + ++ GF
Sbjct: 531 GFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGF 567
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 72/349 (20%), Positives = 127/349 (36%), Gaps = 68/349 (19%)
Query: 122 DLLAAWVRFMKPRRADWLA-------------VLKQLKLMEHPLYLQVAELALLEESFEA 168
DL+ R + RR D LA VL+ L+L L+ +LA + F
Sbjct: 72 DLVDRISRLLVLRRFDALANLSFSFSNELMDLVLRNLRLNPDA-SLEFFKLASKQPKFRP 130
Query: 169 NIRDYTKIIHGYGKKMQIQNAE---NTLLAMKRRGFICDQV----------------TLT 209
++ Y KI+H + + N L+ + + +I V
Sbjct: 131 DVSSYCKIVHILSRARMYKEVRVYLNELVVLCKNNYIASAVWDELVSVYREFSFSPTVFD 190
Query: 210 VMVVMYSKAGNLKMAEETF-----------------------------------EEIKLL 234
+++ ++++ G K A F E++ L
Sbjct: 191 MILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIAL 250
Query: 235 GEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGA 294
G D SY MV AY + G +D ++EM+ Y +L+ GY G+ GA
Sbjct: 251 GILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGA 310
Query: 295 QRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSA 354
++V + GI ++R LLI Y GQ ++A M + L + +++ A
Sbjct: 311 KKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHA 370
Query: 355 CEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+++ AL + + G + +L + +LG V + VL
Sbjct: 371 YCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVL 419
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 78/167 (46%), Gaps = 2/167 (1%)
Query: 199 RGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDR 258
+GF M+ + K L A+E F ++K LG P D+ +Y +++ Y + G L
Sbjct: 530 KGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVE 589
Query: 259 GEVLLREMDAQE-VYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
+ L++M ++ + +E+Y +L+ G + + + ++ ++P+ LI
Sbjct: 590 A-LKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLI 648
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
+ G KAY A+ M G+ P+ + I+S+ + +++ A
Sbjct: 649 AGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEA 695
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 73/377 (19%), Positives = 125/377 (33%), Gaps = 90/377 (23%)
Query: 106 FVKQI--ICVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLE 163
FVK++ C P + L+ +V D K L LM E
Sbjct: 278 FVKEMERSCCEPNVVTYNSLIDGYVSL-----GDVCGAKKVLALMS-------------E 319
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ N R YT +I GY K+ Q++ AE + M + D+ V++ Y AG +
Sbjct: 320 KGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDD 379
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG-EVLLR------------------ 264
A + + +G ++ S++ Y + G +++ EVL+
Sbjct: 380 ALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLD 439
Query: 265 ----------------EMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITP 308
EM + V Y LL+ G+ E A ++ + G+ P
Sbjct: 440 GFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAP 499
Query: 309 DARMCALLINAYQMAGQSQKA------------------YTA-----------------F 333
+ L++A+ G +A Y F
Sbjct: 500 NEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIF 559
Query: 334 QNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRL 393
M++ G P + ++ K L AL+ ERDG E +L R
Sbjct: 560 LKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRS 619
Query: 394 GVVEEVEHVLREYGLRE 410
++++ +L E RE
Sbjct: 620 EELQKLNGLLAEMKNRE 636
>gi|449487636|ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g19290-like [Cucumis
sativus]
Length = 885
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 108/245 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E + +I + II + K+ ++ A ++ G + + +M+ Y KA +
Sbjct: 318 MIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGYVKARD 377
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A FEE++ D ++ ++V + R G + G LLR++ + S +
Sbjct: 378 ISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDV 437
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+ G G + A ++ E + GI P +I AY AG ++A+ A+ M K G
Sbjct: 438 TVAGLCWAGRYDEAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFG 497
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
L PS + +L + ++ L+ A L D+ GF V A L + R+G V E
Sbjct: 498 LTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAE 557
Query: 401 HVLRE 405
+ E
Sbjct: 558 SLWNE 562
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 92/215 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
LLE+ ++ + II YG + A M + G T + +++ + G+
Sbjct: 458 LLEKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGS 517
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A ++ G P+ ++ ++ Y R G ++ E L EM + V+ + + A
Sbjct: 518 LDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAA 577
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+ G ++G A VF + G P+ + LI + G+ +A + M K G
Sbjct: 578 FINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRG 637
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
L P V +I+ K+ ++ A+E +D+ R G
Sbjct: 638 LLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMG 672
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 77/172 (44%)
Query: 206 VTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLRE 265
V ++ Y AG + A + + G + S++++ VR G LD + L +
Sbjct: 468 VAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYD 527
Query: 266 MDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQ 325
M + V + + LL GY G A+ ++ ++ G+ PDA A IN ++G
Sbjct: 528 MIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGL 587
Query: 326 SQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
AY F +M + G P++ ++ K +LN AL+ + ++ + G +
Sbjct: 588 MTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLL 639
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 70/159 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + F N Y +I G+ K ++ A + M +RG + D T+ +++ K G
Sbjct: 598 MLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGR 657
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+K+A ETF ++ +G D +Y +++ Y +A + + L+ +M Y
Sbjct: 658 MKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNI 717
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+ GY A + E + GI P+ +INA
Sbjct: 718 RIHGYCTVRKINRAVMILEELISVGIVPNTVTYNTMINA 756
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 89/222 (40%)
Query: 156 VAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
+A ++++ F +T ++ GY + + AE+ MK RG D V +
Sbjct: 523 IALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGL 582
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
+G + A + F ++ G + Y S++ + + G L+ L+REM+ + +
Sbjct: 583 CISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDI 642
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
++ G G + A F + G++PD LI+ Y A A
Sbjct: 643 FTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMK 702
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
M +G EP + + ++NRA+ L +L G +
Sbjct: 703 MSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIV 744
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 70/162 (43%)
Query: 182 KKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKR 241
+K + A L M +GF + TV++ Y + G + MAE + E+K G D
Sbjct: 514 RKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAV 573
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI 301
++ + + +G++ + +M + + VY +L+ G+ G A ++ +
Sbjct: 574 AFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREM 633
Query: 302 QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G+ PD ++I G+ + A F +M + GL P
Sbjct: 634 NKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSP 675
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 116/256 (45%), Gaps = 8/256 (3%)
Query: 153 YLQVAEL----ALLEESFEANIR----DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICD 204
Y QV +L + E+ +IR Y +I+G K + AE+ ++ M++ G
Sbjct: 201 YCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPS 260
Query: 205 QVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLR 264
T ++ Y AG L+ +++ G D S+GS+V A+ + G + +L
Sbjct: 261 VETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILD 320
Query: 265 EMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAG 324
+M ++V ++VY +++ Y +G++E A + E ++ +G++ LL+ +
Sbjct: 321 DMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSS 380
Query: 325 QSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASC 384
Q +A +R GL P I+SAC + ++ALE L ++ + G
Sbjct: 381 QIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYH 440
Query: 385 TLAAWFKRLGVVEEVE 400
TL + G V ++E
Sbjct: 441 TLVSALASAGRVHDME 456
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 112/242 (46%), Gaps = 3/242 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+GY + ++ A MK R D +T ++ K + AE+ E++
Sbjct: 194 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 253
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G ++ +++ AY AG L++ +L +M + + + ++++ + NG
Sbjct: 254 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 313
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + + + + P+A++ +I+AY +G +++A+ + M+ +G+ S L+L
Sbjct: 314 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLL 373
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE---YGLR 409
+ +Q++ A E + L G + T+ + G ++ +L+E YG+R
Sbjct: 374 KGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIR 433
Query: 410 ET 411
T
Sbjct: 434 PT 435
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 100/226 (44%)
Query: 129 RFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQN 188
R ++P + A++ L +E + + + + + ++ + +I YG Q++
Sbjct: 220 RHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEK 279
Query: 189 AENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVM 248
L M+++G D ++ +V + K G + A +++ + + Y S++
Sbjct: 280 CFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIID 339
Query: 249 AYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITP 308
AY+ +G ++ +L+ +M V Y LL+G + + A+ + ++ G+ P
Sbjct: 340 AYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRP 399
Query: 309 DARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSA 354
D +I+A G + KA Q M K G+ P+ + ++SA
Sbjct: 400 DVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSA 445
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/268 (18%), Positives = 101/268 (37%), Gaps = 35/268 (13%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G + + +A M G + + +T M+ + K G+L+ +++
Sbjct: 19 YNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQML 78
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY-------------------- 272
G + +Y ++ RAG +D VL+ EM + ++
Sbjct: 79 HDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESR 138
Query: 273 ---------------VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
+G+ LL G +G A++V E + G+ P + LI
Sbjct: 139 TMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLI 198
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
N Y + A+ F+ M+ + P +++ K + +A + ++++E+ G
Sbjct: 199 NGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVD 258
Query: 378 VGKEASCTLAAWFKRLGVVEEVEHVLRE 405
E TL + G +E+ VL +
Sbjct: 259 PSVETFNTLIDAYGTAGQLEKCFTVLSD 286
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/174 (20%), Positives = 75/174 (43%)
Query: 198 RRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLD 257
++G + T ++++ K G + AE+ E + G Y +++ Y + L
Sbjct: 149 KKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLR 208
Query: 258 RGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
+ +M ++ + Y AL+ G A+ + ++ +G+ P LI
Sbjct: 209 GAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLI 268
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDL 371
+AY AGQ +K +T +M++ G++ ++ A K ++ A+ L D+
Sbjct: 269 DAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDM 322
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/245 (19%), Positives = 95/245 (38%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + + NI Y ++ G + ++ + M D T +++ ++ G
Sbjct: 77 MLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGE 136
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ F E G L + ++ + G + + E +L + + + +Y
Sbjct: 137 SRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNT 196
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ GY + GA +FE ++ I PD LIN KA M K+G
Sbjct: 197 LINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSG 256
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
++PS + ++ A QL + L D+++ G + ++ F + G + E
Sbjct: 257 VDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAV 316
Query: 401 HVLRE 405
+L +
Sbjct: 317 AILDD 321
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 35/177 (19%), Positives = 72/177 (40%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N + Y II Y + + A + MK G VT +++ ++ + AEE
Sbjct: 330 NAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELI 389
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ G D SY +++ A G D+ LL+EM+ + Y L+ +
Sbjct: 390 YTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASA 449
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
G + +++ + + P + + ++++AY K + + M + G+ D
Sbjct: 450 GRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFDD 506
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 108/248 (43%), Gaps = 6/248 (2%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L+ + ++ + ++H K+ +I A+ + +RG V+ ++ Y K+GN
Sbjct: 216 ILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGN 275
Query: 221 LKMAEETFEEIKLLGEPL---DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
L ++ F + + E D +Y ++ + G LD L EM + +
Sbjct: 276 L---DQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVT 332
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
+ L+ G+ + G ++ +++ + G+ PD LIN G ++A M
Sbjct: 333 FTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMT 392
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
+ GL+P +++ C KE L ALE ++ ++G + A L + F R G V
Sbjct: 393 QRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVI 452
Query: 398 EVEHVLRE 405
E E LRE
Sbjct: 453 EAERTLRE 460
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 99/219 (45%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E ++ Y+ +I+G K+ Q+ +A L M RG + + VT T ++ + G
Sbjct: 286 MMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGR 345
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ E ++++ G D +Y +++ + G L + L+ EM + + Y
Sbjct: 346 ADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTM 405
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G G+ E A + + + GI D LI+ + GQ +A + M +AG
Sbjct: 406 LIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAG 465
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
++P D +++ K+ + + L +++ DG + G
Sbjct: 466 IKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPG 504
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 92/201 (45%), Gaps = 1/201 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + + ++ Y +I+G K ++ A+ ++ M +RG D+ T T+++ K G+
Sbjct: 356 MLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGD 415
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ A E +E+ G LD ++ +++ + R G + E LREM + Y
Sbjct: 416 LESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTM 475
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G+ G+ + ++ + +Q G P +L+N GQ + A M G
Sbjct: 476 VIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLG 535
Query: 341 LEPSDKCVALILSA-CEKENQ 360
+ P D ++L C+ N+
Sbjct: 536 VVPDDITYNILLEGHCKHGNR 556
Score = 41.6 bits (96), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 50/118 (42%)
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
+EEI G P D + ++ + ++ ++L E+ + + + L+ GY
Sbjct: 213 YEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCK 272
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
+GN + R+ + + PD ++LIN GQ A F M GL P+D
Sbjct: 273 SGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPND 330
>gi|255661218|gb|ACU25778.1| pentatricopeptide repeat-containing protein [Casselia glaziovii]
Length = 426
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 105/218 (48%), Gaps = 4/218 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 213 KNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMQNRGIEPNTITYSTIISIWGKVGKLDR 272
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ Y +M++ Y RAG++ + LL E+ + + + +L
Sbjct: 273 AAMLFQKLRSSGIEIDQVLYQTMIITYERAGLVAHAKRLLHELKRPD-NIPRDTAIHILA 331
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + + F MR G P
Sbjct: 332 G---AGRIEEATWVFRQAIEAGEVKDITVFEHMIDLFSKYKKYSNIIEVFDKMRGIGYFP 388
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKE 381
+ +AL+L+A K + ++A E ++++ +G + E
Sbjct: 389 DSRVIALVLNAYGKLQEFDKANEVYMEMQDEGCIFSDE 426
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 100/236 (42%), Gaps = 6/236 (2%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+ +GK + A + + M+ G + + ++ + ++ MY + A F E++
Sbjct: 82 YNSMINVFGKAKLFKEARSLIGEMRTAGVMPNTISYSTLLTMYVENKKFIEALSVFAEMR 141
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ LD + M+ Y + GM + L E+ Y LLR Y G++E
Sbjct: 142 EIQCSLDLITCNIMIDVYGQLGMAKEADKLFWGXRKMEIEPNVVSYNTLLRVY---GDAE 198
Query: 293 ---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
A +F +Q I + ++ Y + +KA Q M+ G+EP+ +
Sbjct: 199 LFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMQNRGIEPNTITYS 258
Query: 350 LILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
I+S K +L+RA L G + + T+ ++R G+V + +L E
Sbjct: 259 TIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMIITYERAGLVAHAKRLLHE 314
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 96/237 (40%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ D +T +M+ +Y + G K A++ F
Sbjct: 113 NTISYSTLLTMYVENKKFIEALSVFAEMREIQCSLDLITCNIMIDVYGQLGMAKEADKLF 172
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ + + SY +++ Y A + L R M + + Y ++ Y
Sbjct: 173 WGXRKMEIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKT 232
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P+ + +I+ + G+ +A FQ +R +G+E
Sbjct: 233 LEHEKANNLIQEMQNRGIEPNTITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLY 292
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ E+ + A L +L+R + A LA G +EE V R+
Sbjct: 293 QTMIITYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAG----AGRIEEATWVFRQ 345
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
D+ +Y +++ + + G D L++M+ V +Y L+ + A +F
Sbjct: 8 DRYTYSTLITHFGKEGRFDDALSWLQKMEEDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
++ +GITPD +IN + A ++A + MR AG+ P+ + +L+ +
Sbjct: 68 SRLKRSGITPDLVAYNSMINVFGKAKLFKEARSLIGEMRTAGVMPNTISYSTLLTMYVEN 127
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTL 386
+ AL ++ +E C+L
Sbjct: 128 KKFIEALSVFAEM--------REIQCSL 147
>gi|255661202|gb|ACU25770.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 426
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 104/212 (49%), Gaps = 4/212 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 213 KNIEQNVVTYNSMMVIYGKTLEHEKANNLIQEMQDRGIEPNAITYSTIISIWGKVGKLDR 272
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ Y +M++AY RAG++ + LL+E+ + + + +L
Sbjct: 273 AAMLFQKLRCSGIEIDQVLYQTMIVAYERAGLVAHAKRLLQELKRPD-NIPRDTAIHILA 331
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +IN + + F MR G P
Sbjct: 332 G---AGRIEEATWVFRQAVEAGEVKDITVFERMINLFSKHKKYPNVVEVFDKMRGLGYFP 388
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDG 375
+AL+L+A K ++ ++A ++++ +G
Sbjct: 389 HSNVIALVLNAYGKLHEFDKANSVYMEMQDEG 420
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 98/236 (41%), Gaps = 6/236 (2%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+ +GK + A + M+ G + D V+ ++ MY + A F E++
Sbjct: 82 YNSMINVFGKAKLFREARALVSEMRTAGVMPDTVSYCTLLTMYVENQKFLEALSLFSEMR 141
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ D + M+ Y + GM + L M + Y LLR Y G++E
Sbjct: 142 EIQCSFDLTTCNIMIDVYGQLGMAKEADKLFWSMRKMGIEPNVVSYNTLLRVY---GDAE 198
Query: 293 ---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
A +F +Q I + ++ Y + +KA Q M+ G+EP+ +
Sbjct: 199 LFGEAIHLFRLMQRKNIEQNVVTYNSMMVIYGKTLEHEKANNLIQEMQDRGIEPNAITYS 258
Query: 350 LILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
I+S K +L+RA L G + + T+ ++R G+V + +L+E
Sbjct: 259 TIISIWGKVGKLDRAAMLFQKLRCSGIEIDQVLYQTMIVAYERAGLVAHAKRLLQE 314
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 88/202 (43%), Gaps = 4/202 (1%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D T +M+ +Y + G K A++ F ++ +G + SY +++ Y A + L
Sbjct: 148 DLTTCNIMIDVYGQLGMAKEADKLFWSMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLF 207
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
R M + + Y +++ Y E A + + +Q GI P+A + +I+ +
Sbjct: 208 RLMQRKNIEQNVVTYNSMMVIYGKTLEHEKANNLIQEMQDRGIEPNAITYSTIISIWGKV 267
Query: 324 GQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEAS 383
G+ +A FQ +R +G+E ++ A E+ + A L +L+R + A
Sbjct: 268 GKLDRAAMLFQKLRCSGIEIDQVLYQTMIVAYERAGLVAHAKRLLQELKRPDNIPRDTAI 327
Query: 384 CTLAAWFKRLGVVEEVEHVLRE 405
LA G +EE V R+
Sbjct: 328 HILAG----AGRIEEATWVFRQ 345
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 76/172 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ +A + L M+ D V + ++ + K + A F +K
Sbjct: 12 YSTLITHFGKEGLFDDALSWLQKMEEDRVPGDLVLYSNLIELSRKLCDYSRAISIFSRLK 71
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y SM+ + +A + L+ EM V + Y LL Y N
Sbjct: 72 RSGIAPDLVAYNSMINVFGKAKLFREARALVSEMRTAGVMPDTVSYCTLLTMYVENQKFL 131
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A +F ++ + D C ++I+ Y G +++A F +MRK G+EP+
Sbjct: 132 EALSLFSEMREIQCSFDLTTCNIMIDVYGQLGMAKEADKLFWSMRKMGIEPN 183
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 6/185 (3%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+ E N Y+ II +GK ++ A ++ G DQV M+V Y +AG +
Sbjct: 247 DRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRCSGIEIDQVLYQTMIVAYERAGLVA 306
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLRE-MDAQEVYVGSEVYKAL 281
A+ +E+K P D + + AG ++ + R+ ++A EV V++ +
Sbjct: 307 HAKRLLQELK---RP-DNIPRDTAIHILAGAGRIEEATWVFRQAVEAGEVK-DITVFERM 361
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+ +S + VF+ ++ G P + + AL++NAY + KA + + M+ G
Sbjct: 362 INLFSKHKKYPNVVEVFDKMRGLGYFPHSNVIALVLNAYGKLHEFDKANSVYMEMQDEGC 421
Query: 342 EPSDK 346
SD+
Sbjct: 422 AFSDE 426
>gi|224127136|ref|XP_002329409.1| predicted protein [Populus trichocarpa]
gi|222870459|gb|EEF07590.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 103/243 (42%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E E ++ Y +++G + I++AE L M+ D VT M+ Y + G +
Sbjct: 160 ENGVEPSLFTYNFLLNGLVNSVFIESAERVLEVMENGKIGPDVVTYNTMIKGYCQVGKTQ 219
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A E F +++L DK +Y +++ A G D L EMD + + Y ++
Sbjct: 220 KAFEKFRDMELRNVAPDKITYMTLIQACYAEGDFDLCLSLYHEMDENGLEIPPHAYSLVI 279
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G G VFE + G + + LI++ G +A F+ M+K GLE
Sbjct: 280 GGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERMKKEGLE 339
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P ++++ K +L+ A+E+L +G V +L + G V E E +
Sbjct: 340 PDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKL 399
Query: 403 LRE 405
E
Sbjct: 400 FEE 402
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 88/204 (43%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E E Y+ +I G K+ + M ++G + T ++ +K GN+
Sbjct: 265 ENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMG 324
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A FE +K G D +YG +V ++G LD L V V + +Y +L+
Sbjct: 325 EAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLI 384
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G G A+++FE + G PD+ LI+A G++ +A F+ M G +
Sbjct: 385 DGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDEALAFFKRMEDEGCD 444
Query: 343 PSDKCVALILSACEKENQLNRALE 366
+ ++++ +E++ AL+
Sbjct: 445 QTVYTYTIMINGLFREHKNEEALK 468
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 71/164 (43%)
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
G+L + F + + +G ++ + S++ ++ GM++ + R M V Y
Sbjct: 111 GDLDNVKSVFCKFRGMGFLMNVSAANSLIKSFGSLGMVEELLWVWRGMKENGVEPSLFTY 170
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
LL G + E A+RV E ++ I PD +I Y G++QKA+ F++M
Sbjct: 171 NFLLNGLVNSVFIESAERVLEVMENGKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMEL 230
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEA 382
+ P ++ AC E + L +++ +G + A
Sbjct: 231 RNVAPDKITYMTLIQACYAEGDFDLCLSLYHEMDENGLEIPPHA 274
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 79/184 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++++ + N+ YT +I K + A MK+ G D VT V+V K+G
Sbjct: 298 MIQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGR 357
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A E E ++ G ++ Y S++ +AG + E L EM + S Y A
Sbjct: 358 LDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNA 417
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ + G ++ A F+ ++ G ++IN ++++A + M G
Sbjct: 418 LIDALAKCGKTDEALAFFKRMEDEGCDQTVYTYTIMINGLFREHKNEEALKMWDMMIDKG 477
Query: 341 LEPS 344
+ P+
Sbjct: 478 ITPT 481
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/181 (20%), Positives = 75/181 (41%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+E E ++ Y +++ K ++ A L + G + + + ++ KAG +
Sbjct: 335 KEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGRVH 394
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
AE+ FEE+ G P D Y +++ A + G D + M+ + Y ++
Sbjct: 395 EAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDEALAFFKRMEDEGCDQTVYTYTIMI 454
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G +E A ++++ + GITP A L ++G+ +A + G+
Sbjct: 455 NGLFREHKNEEALKMWDMMIDKGITPTAAAFRALSIGLCLSGKVARACKLLDELAPMGVI 514
Query: 343 P 343
P
Sbjct: 515 P 515
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/224 (20%), Positives = 91/224 (40%), Gaps = 7/224 (3%)
Query: 141 VLKQLKLMEHP-LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR 199
VLK ++L + P L L+ A ++ + N++ Y I + N ++ +
Sbjct: 67 VLKSMELQKRPDLALKFFTWAGKQKKYTHNLQCYVSSIDVLAINGDLDNVKSVFCKFRGM 126
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEE---TFEEIKLLGEPLDKRSYGSMVMAYVRAGML 256
GF+ + ++ + G+L M EE + +K G +Y ++ V + +
Sbjct: 127 GFLMNVSAANSLIKSF---GSLGMVEELLWVWRGMKENGVEPSLFTYNFLLNGLVNSVFI 183
Query: 257 DRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALL 316
+ E +L M+ ++ Y +++GY G ++ A F ++ + PD L
Sbjct: 184 ESAERVLEVMENGKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKITYMTL 243
Query: 317 INAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQ 360
I A G + + M + GLE +L++ KE +
Sbjct: 244 IQACYAEGDFDLCLSLYHEMDENGLEIPPHAYSLVIGGLCKEGK 287
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 109/249 (43%), Gaps = 8/249 (3%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L+ + ++ + ++H K+ +I A+ + +RG V+ ++ Y K+GN
Sbjct: 216 ILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGN 275
Query: 221 LKMAEETFEEIKLLGE----PLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
L ++ F + + E P D +Y ++ + G LD L EM + +
Sbjct: 276 L---DQGFRLKRFMMENRVFP-DVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDV 331
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
+ L+ G+ + G ++ +++ + G+ PD LIN G ++A M
Sbjct: 332 TFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEM 391
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVV 396
+ GL+P +++ C KE L ALE ++ ++G + A L + F R G V
Sbjct: 392 TQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQV 451
Query: 397 EEVEHVLRE 405
E E LRE
Sbjct: 452 IEAERTLRE 460
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 99/219 (45%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E ++ Y+ +I+G K+ Q+ +A L M RG + + VT T ++ + G
Sbjct: 286 MMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGR 345
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ E ++++ G D +Y +++ + G L + L+ EM + + Y
Sbjct: 346 ADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTM 405
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G G+ E A + + + GI D LI+ + GQ +A + M +AG
Sbjct: 406 LIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAG 465
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
++P D +++ K+ + + L +++ DG + G
Sbjct: 466 IKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPG 504
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 88/192 (45%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + + ++ Y +I+G K ++ A+ ++ M +RG D+ T T+++ K G+
Sbjct: 356 MLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGD 415
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ A E +E+ G LD ++ +++ + R G + E LREM + Y
Sbjct: 416 LESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTM 475
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G+ G+ + ++ + +Q G P +L+N GQ + A M G
Sbjct: 476 VIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLG 535
Query: 341 LEPSDKCVALIL 352
+ P D ++L
Sbjct: 536 VVPDDITYNILL 547
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 50/118 (42%)
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
+EEI G P D + ++ + ++ ++L E+ + + + L+ GY
Sbjct: 213 YEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCK 272
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
+GN + R+ + + PD ++LIN GQ A F M GL P+D
Sbjct: 273 SGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPND 330
>gi|125558723|gb|EAZ04259.1| hypothetical protein OsI_26403 [Oryza sativa Indica Group]
Length = 528
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 9/215 (4%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQV-TLTVMVVMYSKAGNLKMAEETFEEIK 232
T +I G ++ AE L G I + ++ Y K G+LK AE+ +E+
Sbjct: 127 TALISSLGSARRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMS 186
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D+ +Y +V AY RAG + +LL+EM+A V S V+ +L G+ G +
Sbjct: 187 QCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQ 246
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A V + +G+ PD ++I+ + A AF MR+ G+EP ++
Sbjct: 247 KAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLI 306
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLA 387
A K + +RA+E ++ +E++C L
Sbjct: 307 DAHCKGGRHDRAIELFDEM--------RESNCPLG 333
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 105/248 (42%), Gaps = 7/248 (2%)
Query: 159 LALLEESFEANIRD----YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
A+L E + +R Y +I +GK + +A + M+ G D VT ++
Sbjct: 249 FAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDA 308
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
+ K G A E F+E++ PL +Y M+ + E +L EM Q +
Sbjct: 309 HCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPN 368
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
Y L+ Y +G + A EA++ G+ P + M L+NAY G + A +
Sbjct: 369 IITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSSTMYHALVNAYAQRGLADHALNVVK 428
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
MR GLE S + +++A ++ ++ A L ++ +G + T K L
Sbjct: 429 AMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGL---RPDVITYTTLMKALI 485
Query: 395 VVEEVEHV 402
VE+ E V
Sbjct: 486 RVEQFEKV 493
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 128/309 (41%), Gaps = 28/309 (9%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRA-DWLAVLKQLKLMEHPLYL-----------QVAEL- 159
+ P+ SDL++A+ R P A + LA + + L + +VAE
Sbjct: 84 LEPDAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAE 143
Query: 160 ALLEESFEAN-----IRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
AL E F A R Y ++ GY K ++NAE L M + G D+ T +++V
Sbjct: 144 ALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDA 203
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGE-----VLLREMDAQ 269
Y++AG + A +E++ D S V + + AG DRGE +LREM A
Sbjct: 204 YTRAGRWESARILLKEMEA-----DGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHAS 258
Query: 270 EVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
V Y ++ + A F+ ++ GI PD LI+A+ G+ +A
Sbjct: 259 GVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRA 318
Query: 330 YTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAW 389
F MR++ ++++ +E + L +++ G + TL
Sbjct: 319 IELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDV 378
Query: 390 FKRLGVVEE 398
+ R G +E
Sbjct: 379 YGRSGRFKE 387
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 103/240 (42%), Gaps = 3/240 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+++I+ G+ + + Q A L M G D+ VM+ + K L A + F+ ++
Sbjct: 232 FSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMR 291
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D ++ +++ A+ + G DR L EM +G+ Y ++ E
Sbjct: 292 EEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWE 351
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
G + + ++ G+ P+ L++ Y +G+ ++A + M+ GL+PS ++
Sbjct: 352 GVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSSTMYHALV 411
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWF---KRLGVVEEVEHVLREYGLR 409
+A + + AL + + DG +L F +R+ V ++E GLR
Sbjct: 412 NAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLR 471
>gi|222632709|gb|EEE64841.1| hypothetical protein OsJ_19698 [Oryza sativa Japonica Group]
Length = 496
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 96/209 (45%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
E +I + ++ GYGK ++ NA MK GF VT +++ + +A ++
Sbjct: 172 EGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTR 231
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A ++K G K +Y ++ ++ R + + +L M+ + V + Y L+R
Sbjct: 232 ANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVR 291
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
M GN + A+++F+++ G+ P + ++I Y G S KA MR+ GL P
Sbjct: 292 ALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIP 351
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLE 372
+ L + K+++ A L D+E
Sbjct: 352 NSASYGLTIRVLCKDDKCQEAEALLDDME 380
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 89/206 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT ++HGY Q + M+R G + T ++ + + G + A F+E+
Sbjct: 76 YTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMP 135
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ G + SY +++ R G L LL M + + L+ GY G
Sbjct: 136 VRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMS 195
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A F ++ AG P A +LI + A +A A +M++ GLEP+ +++
Sbjct: 196 NALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILI 255
Query: 353 SACEKENQLNRALEFLIDLERDGFMV 378
+ +EN + +A E L +E+ G V
Sbjct: 256 DSFARENHMGKAFEILAGMEKAGLEV 281
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 95/209 (45%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I G + ++ +A L M+ G +T ++V Y KAG + A F
Sbjct: 142 NVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFF 201
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++K G +Y ++ + RA + R L +M + + Y L+ ++
Sbjct: 202 NQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARE 261
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
+ A + ++ AG+ DA +L+ A M G + A FQ+M + G+EPS+
Sbjct: 262 NHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIY 321
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFM 377
+++ +E +AL+ ++++ + G +
Sbjct: 322 DMMIYGYGREGSSYKALKLIMEMRQKGLI 350
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 89/219 (40%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKL 233
T +++G K + A M G ++VT T ++ Y G + FEE++
Sbjct: 42 TALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRR 101
Query: 234 LGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEG 293
G + +Y ++ + R G +R L EM + + Y L+ G +G
Sbjct: 102 GGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWD 161
Query: 294 AQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILS 353
A ++ + ++ G P LL++ Y AG+ A F M+ AG +PS ++++
Sbjct: 162 AAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIA 221
Query: 354 ACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKR 392
+ + RA L D++ G K L F R
Sbjct: 222 GFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFAR 260
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 75/189 (39%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D T +V K G++ A F+E+ LLG ++ +Y +++ Y G ++G L
Sbjct: 37 DVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALF 96
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
EM V Y L+ + G E A+ +F+ + GI + LI
Sbjct: 97 EEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRH 156
Query: 324 GQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEAS 383
G+ A MR G PS L++ K +++ AL F ++ GF
Sbjct: 157 GKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTY 216
Query: 384 CTLAAWFKR 392
L A F R
Sbjct: 217 NMLIAGFCR 225
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 82/210 (39%), Gaps = 4/210 (1%)
Query: 159 LALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
AL EE E N+ Y +I + + + + A + M RG + + V+ ++
Sbjct: 93 FALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAG 152
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
+ G L A + + ++ G ++ +V Y +AG + +M A
Sbjct: 153 LCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPS 212
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+ Y L+ G+ + A R ++ G+ P +LI+++ KA+
Sbjct: 213 AVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILA 272
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRA 364
M KAGLE +++ A E + A
Sbjct: 273 GMEKAGLEVDAHTYGVLVRALCMEGNMKDA 302
>gi|168028441|ref|XP_001766736.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681945|gb|EDQ68367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 560
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 99/206 (48%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+ F+ + Y+ IIH GK ++ A M RGF VT +++ + +K+GN
Sbjct: 165 QAGFQPDTFTYSVIIHCLGKAGKVSEALKLFEEMVERGFAPSLVTYNIIIDLQAKSGNYV 224
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
MA + + +++ G D+ +Y M+ + G L E++ EM+ + +Y ++
Sbjct: 225 MAMKLYNDMQDAGFHPDRVTYSIMMEVLGQIGHLQEAELMFNEMEQAGWVPDAPIYGVMV 284
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
+ N+E A ++ + +G+TP+ ++ L+ +Y Q A+ + M+ GL
Sbjct: 285 DMWGKARNAERALEWYQKMLDSGLTPNVQISNSLLGSYLRMQQFDLAFGVIETMKAWGLV 344
Query: 343 PSDKCVALILSACEKENQLNRALEFL 368
P+ + ++LS+C Q ++ + +
Sbjct: 345 PTLQTHTILLSSCTASAQHHQVVNLM 370
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 108/255 (42%), Gaps = 11/255 (4%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
E E + Y ++IH YG+ + A M+ G D+VT +V ++SKAG
Sbjct: 96 EGCEPCVVTYNRLIHAYGRANFLGEAMRIFYQMQEEGCSPDRVTYCTLVDLHSKAGFHDN 155
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A + +++++ G D +Y ++ +AG + L EM + Y ++
Sbjct: 156 AMDMYQKMQQAGFQPDTFTYSVIIHCLGKAGKVSEALKLFEEMVERGFAPSLVTYNIIID 215
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
+ +GN A +++ +Q AG PD ++++ G Q+A F M +AG P
Sbjct: 216 LQAKSGNYVMAMKLYNDMQDAGFHPDRVTYSIMMEVLGQIGHLQEAELMFNEMEQAGWVP 275
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRL-------GVV 396
+++ K RALE+ + G + S +L + R+ GV+
Sbjct: 276 DAPIYGVMVDMWGKARNAERALEWYQKMLDSGLTPNVQISNSLLGSYLRMQQFDLAFGVI 335
Query: 397 EEVEHVLREYGLRET 411
E ++ +GL T
Sbjct: 336 E----TMKAWGLVPT 346
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 90/211 (42%)
Query: 195 AMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG 254
A ++ G+ D T T M+ + +A N + +E++ G +Y ++ AY RA
Sbjct: 57 AKEQEGYKHDVCTYTTMIGIMGRARNFEACSRLLQEMRREGCEPCVVTYNRLIHAYGRAN 116
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
L + +M + Y L+ +S G + A +++ +Q AG PD +
Sbjct: 117 FLGEAMRIFYQMQEEGCSPDRVTYCTLVDLHSKAGFHDNAMDMYQKMQQAGFQPDTFTYS 176
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
++I+ AG+ +A F+ M + G PS +I+ K A++ D++
Sbjct: 177 VIIHCLGKAGKVSEALKLFEEMVERGFAPSLVTYNIIIDLQAKSGNYVMAMKLYNDMQDA 236
Query: 375 GFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
GF + + ++G ++E E + E
Sbjct: 237 GFHPDRVTYSIMMEVLGQIGHLQEAELMFNE 267
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 99/237 (41%), Gaps = 2/237 (0%)
Query: 141 VLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRG 200
VLK K E L L+ + A +E ++ ++ YT +I G+ + L M+R G
Sbjct: 40 VLKHQK--ESGLALKFFDWAKEQEGYKHDVCTYTTMIGIMGRARNFEACSRLLQEMRREG 97
Query: 201 FICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGE 260
VT ++ Y +A L A F +++ G D+ +Y ++V + +AG D
Sbjct: 98 CEPCVVTYNRLIHAYGRANFLGEAMRIFYQMQEEGCSPDRVTYCTLVDLHSKAGFHDNAM 157
Query: 261 VLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAY 320
+ ++M + Y ++ G A ++FE + G P ++I+
Sbjct: 158 DMYQKMQQAGFQPDTFTYSVIIHCLGKAGKVSEALKLFEEMVERGFAPSLVTYNIIIDLQ 217
Query: 321 QMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
+G A + +M+ AG P ++++ + L A ++E+ G++
Sbjct: 218 AKSGNYVMAMKLYNDMQDAGFHPDRVTYSIMMEVLGQIGHLQEAELMFNEMEQAGWV 274
>gi|410110079|gb|AFV61119.1| pentatricopeptide repeat-containing protein 123, partial [Junellia
succulentifolia]
Length = 382
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 104/212 (49%), Gaps = 4/212 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 174 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDR 233
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ Y +M++AY RAG++ + LL E+ + + ++ +L
Sbjct: 234 AAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDIAIHILA 292
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + + F MR G P
Sbjct: 293 G---AGRIEEATWVFRQAIDAGXVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFP 349
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDG 375
+AL+L+A K ++ ++A + ++++ G
Sbjct: 350 DSNVIALVLNAYGKLHEFDKANDVYMEMQEVG 381
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 103/248 (41%), Gaps = 6/248 (2%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L F ++ Y +I+ +GK ++A + + M+ G + + + ++ MY +
Sbjct: 31 LKRSGFMPDLVAYNAMINVFGKAKLFRDARSLISEMRTAGVTPNTASYSTLLTMYVENKK 90
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A F E++ + LD + M+ Y + GM + L M + Y
Sbjct: 91 FLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNT 150
Query: 281 LLRGYSMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
LLR Y G++E A +F +Q I + ++ Y + +KA Q M+
Sbjct: 151 LLRVY---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQ 207
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
G+EP+ + I+S K +L+RA L G + + T+ ++R G+V
Sbjct: 208 NRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVA 267
Query: 398 EVEHVLRE 405
+ +L E
Sbjct: 268 HAKRLLHE 275
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 101/237 (42%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 74 NTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 133
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 134 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 193
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G++
Sbjct: 194 LEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLY 253
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE V R+
Sbjct: 254 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAG----AGRIEEATWVFRQ 306
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 60/141 (42%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D V + ++ + K + A F +K G D +Y +M+ + +A + L+
Sbjct: 4 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFRDARSLI 63
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
EM V + Y LL Y N A VF ++ D C ++I+ Y
Sbjct: 64 SEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQL 123
Query: 324 GQSQKAYTAFQNMRKAGLEPS 344
G +++A F MRK G+EP+
Sbjct: 124 GMAKEADKLFWGMRKMGIEPN 144
>gi|255661176|gb|ACU25757.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 426
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 106/218 (48%), Gaps = 4/218 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 213 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQHRGIEPNSITYSTIISIWGKVGKLDR 272
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ Y +M++AY RAG++ + LL E+ + + ++ +L
Sbjct: 273 AAVLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDIAIHILA 331
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + + F MR G P
Sbjct: 332 G---AGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFP 388
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKE 381
+AL+L+A K ++ ++A + ++++ G + E
Sbjct: 389 DSNVIALVLNAYGKLHEFDKANDVYMEMQEVGCVFSDE 426
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 101/237 (42%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 113 NTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 172
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 173 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 232
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G+E
Sbjct: 233 LEHEKANNLIQEMQHRGIEPNSITYSTIISIWGKVGKLDRAAVLFQKLRSSGVEIDQVLY 292
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE V R+
Sbjct: 293 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAG----AGRIEEATWVFRQ 345
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 73/172 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ A + L M++ D V + ++ + K + A F +K
Sbjct: 12 YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 71
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +M+ + A + L+ EM V + Y LL Y N
Sbjct: 72 RSGFMPDLVAYNAMINVFGXAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENKKFL 131
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF ++ D C ++I+ Y G +++A F MRK G+EP+
Sbjct: 132 EALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 31/172 (18%), Positives = 75/172 (43%), Gaps = 2/172 (1%)
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
D+ +Y +++ + + G+ D L++M+ V +Y L+ + A +F
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
++ +G PD +IN + A ++A + MR AG+ P+ + +L+ +
Sbjct: 68 SRLKRSGFMPDLVAYNAMINVFGXAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVEN 127
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRE 410
+ AL ++ ++ + + +LG+ +E + + +G+R+
Sbjct: 128 KKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF--WGMRK 177
>gi|302822703|ref|XP_002993008.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
gi|300139208|gb|EFJ05954.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
Length = 431
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 96/205 (46%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I Y K +I++A L M + D TL ++ S+ G ++A E FE +K
Sbjct: 157 YTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMK 216
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G ++ S+ +M+ +AG + + EM+A+ + S + L+ +
Sbjct: 217 KSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYAS 276
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +V + ++ AG+TPD +I A+ AG KA+ F +M KAG + L++
Sbjct: 277 EAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLI 336
Query: 353 SACEKENQLNRALEFLIDLERDGFM 377
A K + A + D+++ G +
Sbjct: 337 DALVKAGRYQDARDIYFDMKKKGIL 361
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 97/250 (38%), Gaps = 35/250 (14%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ E + Y ++ G GK I A +MK G D T +++ +
Sbjct: 75 MIKTGLEPDTLLYNVVLDGLGKANMIDEACKLFASMKSMGCPADDYTYAILIRSLGRCKR 134
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A F+E++ G +Y +++ Y +AG ++ V+L++M + + +
Sbjct: 135 DEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNS 194
Query: 281 LLRGYSMNGNSEGAQRVFE-----------------------------AIQFA------G 305
L+ S G +E A +FE A QF G
Sbjct: 195 LITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARG 254
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
I P++ LIN A + +AY Q MR AGL P ++ A K + +A
Sbjct: 255 IKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAF 314
Query: 366 EFLIDLERDG 375
E D+E+ G
Sbjct: 315 EMFGDMEKAG 324
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 95/237 (40%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y +I K + A + L M + G D + V++ KA + A + F
Sbjct: 48 NAYTYKCVIQSLVKAGNVVLAMDFLDKMIKTGLEPDTLLYNVVLDGLGKANMIDEACKLF 107
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+K +G P D +Y ++ + R + +L EM+ + + Y ++ Y
Sbjct: 108 ASMKSMGCPADDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKA 167
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G E A V + + + PD LI A G+++ A F+ M+K+G+ +
Sbjct: 168 GRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSF 227
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+L C K ++ A +F+ ++E G TL R E VL+E
Sbjct: 228 NAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQE 284
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 82/203 (40%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
+I YG+ +I + + + G + T ++ KAGN+ +A + +++ G
Sbjct: 20 VIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMDFLDKMIKTG 79
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
D Y ++ +A M+D L M + Y L+R E A
Sbjct: 80 LEPDTLLYNVVLDGLGKANMIDEACKLFASMKSMGCPADDYTYAILIRSLGRCKRDEEAT 139
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
+F+ ++ G TP A +I+ Y AG+ + A + M L P D + +++A
Sbjct: 140 LLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSLITAV 199
Query: 356 EKENQLNRALEFLIDLERDGFMV 378
+ + A E +++ G V
Sbjct: 200 SRTGRTELACEIFERMKKSGVAV 222
>gi|224083253|ref|XP_002306972.1| predicted protein [Populus trichocarpa]
gi|222856421|gb|EEE93968.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 107/242 (44%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ E +++ II G+ K + A L ++ G TL ++ G
Sbjct: 264 DKLELDVQLSNDIIVGFAKAGDLSKALEFLGVVQGSGLSVKTATLVAVIWALGNCGRTVE 323
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
AE FEE++ G R+Y +++ YV+AG+L E ++ EM+ V + Y L+
Sbjct: 324 AEAIFEEMRDNGLKPRTRAYNALLRGYVKAGLLKDAEFVVSEMERSGVSPNEQTYSFLID 383
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
Y G E A+ V + ++ + + P+A + + ++++Y+ G+ QK++ + M +G+ P
Sbjct: 384 AYGNAGRWESARIVLKEMEASNVQPNAYVFSRILSSYRDKGEWQKSFQVLREMENSGVRP 443
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+++ K N L+ A+ + +G TL R G + E +
Sbjct: 444 DRVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPDTVTWNTLIDCHCRAGKHDRAEELF 503
Query: 404 RE 405
E
Sbjct: 504 EE 505
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 81/172 (47%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I +GK + +A T M G D VT ++ + +AG AEE FEE+
Sbjct: 448 YNVMIDTFGKFNCLDHAMATFDRMLSEGIEPDTVTWNTLIDCHCRAGKHDRAEELFEEMM 507
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G ++ M+ ++ D + LL M +Q + S Y L+ Y +G
Sbjct: 508 EGGYSPCNTTFNIMINSFGDQERWDDVKNLLAHMRSQGLVPNSVTYTTLIDIYGKSGRFN 567
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A + ++ AG+ P + M LINAY G S++A +AF+ MR GL+PS
Sbjct: 568 DAIECLDDMKAAGLKPSSTMYNALINAYAQRGLSEQAVSAFRAMRVDGLKPS 619
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 86/201 (42%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
+I G + AE M+ G ++ Y KAG LK AE E++ G
Sbjct: 311 VIWALGNCGRTVEAEAIFEEMRDNGLKPRTRAYNALLRGYVKAGLLKDAEFVVSEMERSG 370
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
++++Y ++ AY AG + ++L+EM+A V + V+ +L Y G + +
Sbjct: 371 VSPNEQTYSFLIDAYGNAGRWESARIVLKEMEASNVQPNAYVFSRILSSYRDKGEWQKSF 430
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
+V ++ +G+ PD ++I+ + A F M G+EP ++
Sbjct: 431 QVLREMENSGVRPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPDTVTWNTLIDCH 490
Query: 356 EKENQLNRALEFLIDLERDGF 376
+ + +RA E ++ G+
Sbjct: 491 CRAGKHDRAEELFEEMMEGGY 511
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/224 (19%), Positives = 93/224 (41%)
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
R Y ++ GY K +++AE + M+R G ++ T + ++ Y AG + A +E
Sbjct: 341 RAYNALLRGYVKAGLLKDAEFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESARIVLKE 400
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
++ + + ++ +Y G + +LREM+ V Y ++ +
Sbjct: 401 MEASNVQPNAYVFSRILSSYRDKGEWQKSFQVLREMENSGVRPDRVFYNVMIDTFGKFNC 460
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
+ A F+ + GI PD LI+ + AG+ +A F+ M + G P + +
Sbjct: 461 LDHAMATFDRMLSEGIEPDTVTWNTLIDCHCRAGKHDRAEELFEEMMEGGYSPCNTTFNI 520
Query: 351 ILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
++++ + + + L + G + TL + + G
Sbjct: 521 MINSFGDQERWDDVKNLLAHMRSQGLVPNSVTYTTLIDIYGKSG 564
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 82/188 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+ +I+ +G + + + +N L M+ +G + + VT T ++ +Y K+G A E +++K
Sbjct: 518 FNIMINSFGDQERWDDVKNLLAHMRSQGLVPNSVTYTTLIDIYGKSGRFNDAIECLDDMK 577
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G Y +++ AY + G+ ++ R M + +L+ + +
Sbjct: 578 AAGLKPSSTMYNALINAYAQRGLSEQAVSAFRAMRVDGLKPSLLALNSLINAFGEDRRDA 637
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A V + ++ + PD L+ A + K + ++ M +G P K A++
Sbjct: 638 EAFTVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPSVYEEMILSGCTPDRKARAMLR 697
Query: 353 SACEKENQ 360
SA + Q
Sbjct: 698 SALKYMKQ 705
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 104/236 (44%), Gaps = 9/236 (3%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +IH G+ ++ A L +R+ +T ++ ++ +L+ A ++
Sbjct: 171 YSILIHALGQSEKLYEA---FLLSQRQNLT--PLTYNALISACARNNDLEKALNLITRMR 225
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRG--EVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
G P D +Y ++ + +R +D + L RE++ ++ + ++ ++ G++ G+
Sbjct: 226 QDGYPSDFVNYSLIIRSLMRKNRVDSAILQKLYREIECDKLELDVQLSNDIIVGFAKAGD 285
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
A +Q +G++ +I A G++ +A F+ MR GL+P +
Sbjct: 286 LSKALEFLGVVQGSGLSVKTATLVAVIWALGNCGRTVEAEAIFEEMRDNGLKPRTRAYNA 345
Query: 351 ILSACEKENQLNRALEFLI-DLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+L K L A EF++ ++ER G ++ L + G E VL+E
Sbjct: 346 LLRGYVKAGLLKDA-EFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESARIVLKE 400
>gi|356508608|ref|XP_003523047.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Glycine max]
Length = 879
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 93/204 (45%), Gaps = 5/204 (2%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
+Y ++ E+ L ++F Y+ +I+ GK + A M +G + + VT ++
Sbjct: 475 MYERMQEVGLSPDTFT-----YSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNIL 529
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ + +KA N + A E + +++ G DK +Y ++ G L+ E + EM
Sbjct: 530 IALQAKARNYQTALELYRDMQNAGFKPDKVTYSIVMEVLGHCGYLEEAEAVFFEMRQNHW 589
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
VY L+ + GN E A + + AG+ P+ C L++A+ + AY
Sbjct: 590 VPDEPVYGLLVDLWGKAGNVEKAWEWYHTMLRAGLLPNVPTCNSLLSAFLRVHRLPDAYN 649
Query: 332 AFQNMRKAGLEPSDKCVALILSAC 355
QNM GL PS + L+LS C
Sbjct: 650 LLQNMVTLGLNPSLQTYTLLLSCC 673
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 110/245 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++++ + N+ Y ++IH YG+ ++ A N M+ G D+VT ++ +++KAG
Sbjct: 409 MVKDGCQPNVVTYNRLIHSYGRANYLREALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGF 468
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L +A +E ++ +G D +Y M+ ++G L L EM Q Y
Sbjct: 469 LDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNI 528
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ + N + A ++ +Q AG PD ++++ G ++A F MR+
Sbjct: 529 LIALQAKARNYQTALELYRDMQNAGFKPDKVTYSIVMEVLGHCGYLEEAEAVFFEMRQNH 588
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
P + L++ K + +A E+ + R G + +L + F R+ + +
Sbjct: 589 WVPDEPVYGLLVDLWGKAGNVEKAWEWYHTMLRAGLLPNVPTCNSLLSAFLRVHRLPDAY 648
Query: 401 HVLRE 405
++L+
Sbjct: 649 NLLQN 653
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/271 (19%), Positives = 111/271 (40%), Gaps = 5/271 (1%)
Query: 141 VLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRG 200
+LKQL+ +H + + + F + YT ++ G+ + L M + G
Sbjct: 356 ILKQLQ--DHSVAVGFFCWLKRQPGFWHDGHTYTTMVGILGRAREFGAINKLLEQMVKDG 413
Query: 201 FICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGE 260
+ VT ++ Y +A L+ A F +++ +G D+ +Y +++ + +AG LD
Sbjct: 414 CQPNVVTYNRLIHSYGRANYLREALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAM 473
Query: 261 VLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAY 320
+ M + + Y ++ +GN A R+F + G P+ +LI
Sbjct: 474 SMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQ 533
Query: 321 QMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGK 380
A Q A +++M+ AG +P ++++ L A ++ ++ ++ +
Sbjct: 534 AKARNYQTALELYRDMQNAGFKPDKVTYSIVMEVLGHCGYLEEAEAVFFEMRQNHWVPDE 593
Query: 381 EASCTLAAWFKRLGVVE---EVEHVLREYGL 408
L + + G VE E H + GL
Sbjct: 594 PVYGLLVDLWGKAGNVEKAWEWYHTMLRAGL 624
>gi|255661158|gb|ACU25748.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 426
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 106/218 (48%), Gaps = 4/218 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 213 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDR 272
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ Y +M++AY RAG++ + LL E+ + + ++ +L
Sbjct: 273 AAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDIAIHILA 331
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + + F MR G P
Sbjct: 332 G---AGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFP 388
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKE 381
+AL+L+A K ++ ++A + ++++ G + E
Sbjct: 389 DSNVIALVLNAYGKLHEFDKANDVYMEMQEVGCVFSDE 426
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 101/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + M+ G + + + ++ MY + A
Sbjct: 75 FTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEAL 134
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 135 SVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 194
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + ++ Y + +KA Q M+ G+E
Sbjct: 195 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIE 251
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 252 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRL 311
Query: 403 LRE 405
L E
Sbjct: 312 LHE 314
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 101/237 (42%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 113 NTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 172
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 173 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 232
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G++
Sbjct: 233 LEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLY 292
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE V R+
Sbjct: 293 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAG----AGRIEEATWVFRQ 345
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ A + L M++ D V + ++ + K + A F +K
Sbjct: 12 YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 71
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +M+ + +A + L+ EM V + Y LL Y N
Sbjct: 72 RSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFL 131
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF ++ D C ++I+ Y G +++A F MRK G+EP+
Sbjct: 132 EALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 32/172 (18%), Positives = 76/172 (44%), Gaps = 2/172 (1%)
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
D+ +Y +++ + + G+ D L++M+ V +Y L+ + A +F
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
++ +G TPD +IN + A ++A + MR AG+ P+ + +L+ +
Sbjct: 68 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVEN 127
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRE 410
+ AL ++ ++ + + +LG+ +E + + +G+R+
Sbjct: 128 KKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF--WGMRK 177
>gi|297724361|ref|NP_001174544.1| Os05g0583900 [Oryza sativa Japonica Group]
gi|42491383|gb|AAS16889.1| hypothetical protein [Oryza sativa Japonica Group]
gi|255676609|dbj|BAH93272.1| Os05g0583900 [Oryza sativa Japonica Group]
Length = 467
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 96/209 (45%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
E +I + ++ GYGK ++ NA MK GF VT +++ + +A ++
Sbjct: 172 EGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTR 231
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A ++K G K +Y ++ ++ R + + +L M+ + V + Y L+R
Sbjct: 232 ANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVR 291
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
M GN + A+++F+++ G+ P + ++I Y G S KA MR+ GL P
Sbjct: 292 ALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIP 351
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLE 372
+ L + K+++ A L D+E
Sbjct: 352 NSASYGLTIRVLCKDDKCQEAEALLDDME 380
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 89/206 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT ++HGY Q + M+R G + T ++ + + G + A F+E+
Sbjct: 76 YTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMP 135
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ G + SY +++ R G L LL M + + L+ GY G
Sbjct: 136 VRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMS 195
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A F ++ AG P A +LI + A +A A +M++ GLEP+ +++
Sbjct: 196 NALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILI 255
Query: 353 SACEKENQLNRALEFLIDLERDGFMV 378
+ +EN + +A E L +E+ G V
Sbjct: 256 DSFARENHMGKAFEILAGMEKAGLEV 281
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 95/209 (45%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I G + ++ +A L M+ G +T ++V Y KAG + A F
Sbjct: 142 NVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFF 201
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++K G +Y ++ + RA + R L +M + + Y L+ ++
Sbjct: 202 NQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARE 261
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
+ A + ++ AG+ DA +L+ A M G + A FQ+M + G+EPS+
Sbjct: 262 NHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIY 321
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFM 377
+++ +E +AL+ ++++ + G +
Sbjct: 322 DMMIYGYGREGSSYKALKLIMEMRQKGLI 350
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 89/219 (40%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKL 233
T +++G K + A M G ++VT T ++ Y G + FEE++
Sbjct: 42 TALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRR 101
Query: 234 LGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEG 293
G + +Y ++ + R G +R L EM + + Y L+ G +G
Sbjct: 102 GGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWD 161
Query: 294 AQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILS 353
A ++ + ++ G P LL++ Y AG+ A F M+ AG +PS ++++
Sbjct: 162 AAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIA 221
Query: 354 ACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKR 392
+ + RA L D++ G K L F R
Sbjct: 222 GFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFAR 260
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 75/189 (39%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D T +V K G++ A F+E+ LLG ++ +Y +++ Y G ++G L
Sbjct: 37 DVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALF 96
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
EM V Y L+ + G E A+ +F+ + GI + LI
Sbjct: 97 EEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRH 156
Query: 324 GQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEAS 383
G+ A MR G PS L++ K +++ AL F ++ GF
Sbjct: 157 GKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTY 216
Query: 384 CTLAAWFKR 392
L A F R
Sbjct: 217 NMLIAGFCR 225
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 85/221 (38%), Gaps = 4/221 (1%)
Query: 159 LALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
AL EE E N+ Y +I + + + + A + M RG + + V+ ++
Sbjct: 93 FALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAG 152
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
+ G L A + + ++ G ++ +V Y +AG + +M A
Sbjct: 153 LCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPS 212
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+ Y L+ G+ + A R ++ G+ P +LI+++ KA+
Sbjct: 213 AVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILA 272
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
M KAGLE +++ A E + A + + G
Sbjct: 273 GMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKG 313
>gi|30694913|ref|NP_191463.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525907|sp|Q9LYT2.2|PP287_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g59040
gi|332646344|gb|AEE79865.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 583
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 10/211 (4%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ YT ++ YG+ + NAE M+ G +T +++ + + K AEE F
Sbjct: 173 NVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVF 232
Query: 229 EEIKLLGE---PL--DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
E LL E PL D++ Y M+ Y +AG ++ + M + V + Y +L+
Sbjct: 233 E--TLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLM- 289
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
S + + ++++ +Q + I PD ALLI AY A + ++A + F+ M AG+ P
Sbjct: 290 --SFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRP 347
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERD 374
+ K ++L A + +A + RD
Sbjct: 348 THKAYNILLDAFAISGMVEQAKTVFKSMRRD 378
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 86/191 (45%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M+R D V+ +++ Y +A + A FEE+ G ++Y ++ A+ +GM
Sbjct: 305 MQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGM 364
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
+++ + + + M ++ Y +L Y + EGA++ F+ I+ G P+
Sbjct: 365 VEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGT 424
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
LI Y A +K ++ MR +G++ + + I+ A + AL + ++E G
Sbjct: 425 LIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCG 484
Query: 376 FMVGKEASCTL 386
++A L
Sbjct: 485 VPPDQKAKNVL 495
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 67/143 (46%), Gaps = 3/143 (2%)
Query: 205 QVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLR 264
++ +++ Y K GN AE + +G + SY +++ +Y R G + E + R
Sbjct: 139 EIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFR 198
Query: 265 EMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI---QFAGITPDARMCALLINAYQ 321
M + + Y+ +L+ + + A+ VFE + + + + PD +M ++I Y+
Sbjct: 199 RMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYK 258
Query: 322 MAGQSQKAYTAFQNMRKAGLEPS 344
AG +KA F +M G+ S
Sbjct: 259 KAGNYEKARKVFSSMVGKGVPQS 281
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 3/126 (2%)
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ Y GN GA+RV + G TP+ L+ +Y G+ A F+ M+ +G
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 341 LEPSDKCVALILSACEKENQLNRA---LEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
EPS +IL + ++ A E L+D ++ ++ + +K+ G E
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 264
Query: 398 EVEHVL 403
+ V
Sbjct: 265 KARKVF 270
>gi|255661150|gb|ACU25744.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
gi|255661152|gb|ACU25745.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 426
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 106/218 (48%), Gaps = 4/218 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 213 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDR 272
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ Y +M++AY RAG++ + LL E+ + + ++ +L
Sbjct: 273 AAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDIAIHILA 331
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + + F MR G P
Sbjct: 332 G---AGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFP 388
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKE 381
+AL+L+A K ++ ++A + ++++ G + E
Sbjct: 389 DSNVIALVLNAYGKLHEFDKANDVYMEMQEVGCVFSDE 426
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 101/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + MK G D + + ++ MY + A
Sbjct: 75 FTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVTPDTASYSTLLTMYVENKKFLEAL 134
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 135 SIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 194
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + ++ Y + +KA Q M+ G+E
Sbjct: 195 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIE 251
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 252 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRL 311
Query: 403 LRE 405
L E
Sbjct: 312 LHE 314
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 100/233 (42%), Gaps = 4/233 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F ++
Sbjct: 117 YSTLLTMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMR 176
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+G + SY +++ Y A + L R M + + Y +++ Y E
Sbjct: 177 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 236
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + +Q GI P++ + +I+ + G+ +A FQ +R +G++ ++
Sbjct: 237 KANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMI 296
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
A E+ + A L +L+R + A LA G +EE V R+
Sbjct: 297 VAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAG----AGRIEEATWVFRQ 345
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 74/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ A + L M++ D V + ++ + K + A F +K
Sbjct: 12 YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 71
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +M+ + +A + L+ EM V + Y LL Y N
Sbjct: 72 RSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVTPDTASYSTLLTMYVENKKFL 131
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A +F ++ D C ++I+ Y G +++A F MRK G+EP+
Sbjct: 132 EALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/172 (18%), Positives = 75/172 (43%), Gaps = 2/172 (1%)
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
D+ +Y +++ + + G+ D L++M+ V +Y L+ + A +F
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
++ +G TPD +IN + A ++A + M+ AG+ P + +L+ +
Sbjct: 68 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVTPDTASYSTLLTMYVEN 127
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRE 410
+ AL ++ ++ + + +LG+ +E + + +G+R+
Sbjct: 128 KKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF--WGMRK 177
>gi|255661164|gb|ACU25751.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 426
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 106/218 (48%), Gaps = 4/218 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 213 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDR 272
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ Y +M++AY RAG++ + LL E+ + + ++ +L
Sbjct: 273 AAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDIAIHILA 331
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + + F MR G P
Sbjct: 332 G---AGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFP 388
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKE 381
+AL+L+A K ++ ++A + ++++ G + E
Sbjct: 389 DSNVIALVLNAYGKLHEFDKANDVYMEMQEVGCVFSDE 426
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 101/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + M+ G + + + ++ MY + A
Sbjct: 75 FTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEAL 134
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 135 SXFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 194
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + ++ Y + +KA Q M+ G+E
Sbjct: 195 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIE 251
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 252 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRL 311
Query: 403 LRE 405
L E
Sbjct: 312 LHE 314
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 101/237 (42%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 113 NTASYSTLLTMYVENKKFLEALSXFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 172
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 173 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 232
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G++
Sbjct: 233 LEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLY 292
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE V R+
Sbjct: 293 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAG----AGRIEEATWVFRQ 345
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 73/172 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ A + L M++ D V + ++ + K + A F +K
Sbjct: 12 YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 71
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +M+ + +A + L+ EM V + Y LL Y N
Sbjct: 72 RSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFL 131
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A F ++ D C ++I+ Y G +++A F MRK G+EP+
Sbjct: 132 EALSXFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 32/172 (18%), Positives = 76/172 (44%), Gaps = 2/172 (1%)
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
D+ +Y +++ + + G+ D L++M+ V +Y L+ + A +F
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
++ +G TPD +IN + A ++A + MR AG+ P+ + +L+ +
Sbjct: 68 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVEN 127
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRE 410
+ AL ++ ++ + + +LG+ +E + + +G+R+
Sbjct: 128 KKFLEALSXFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF--WGMRK 177
>gi|255661146|gb|ACU25742.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 426
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 106/218 (48%), Gaps = 4/218 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 213 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDR 272
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ Y +M++AY RAG++ + LL E+ + + ++ +L
Sbjct: 273 AAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDIAIHILA 331
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + + F MR G P
Sbjct: 332 G---AGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFNKMRGLGYFP 388
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKE 381
+AL+L+A K ++ ++A + ++++ G + E
Sbjct: 389 DSNVIALVLNAYGKLHEFDKANDVYMEMQEVGCVFSDE 426
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 101/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + M+ G + + + ++ MY + A
Sbjct: 75 FTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEAL 134
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 135 SIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 194
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + ++ Y + +KA Q M+ G+E
Sbjct: 195 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIE 251
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 252 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRL 311
Query: 403 LRE 405
L E
Sbjct: 312 LHE 314
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 101/237 (42%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 113 NTASYSTLLTMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 172
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 173 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 232
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G++
Sbjct: 233 LEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLY 292
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE V R+
Sbjct: 293 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAG----AGRIEEATWVFRQ 345
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 74/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ A + L M++ D V + ++ + K + A F +K
Sbjct: 12 YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 71
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +M+ + +A + L+ EM V + Y LL Y N
Sbjct: 72 RSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFL 131
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A +F ++ D C ++I+ Y G +++A F MRK G+EP+
Sbjct: 132 EALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 32/172 (18%), Positives = 76/172 (44%), Gaps = 2/172 (1%)
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
D+ +Y +++ + + G+ D L++M+ V +Y L+ + A +F
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
++ +G TPD +IN + A ++A + MR AG+ P+ + +L+ +
Sbjct: 68 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVEN 127
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRE 410
+ AL ++ ++ + + +LG+ +E + + +G+R+
Sbjct: 128 KKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF--WGMRK 177
>gi|449455399|ref|XP_004145440.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Cucumis sativus]
Length = 576
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 99/231 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y I G K A MKR G T T+++ +Y K MA+ F+E++
Sbjct: 228 YNAYIDGLVKGGNNVKAVEIFHRMKRDGCQPTTDTYTMLINVYGKESKSHMAQNIFDEMR 287
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ ++ ++V A R G+ ++ E + +M Y AL+ YS G
Sbjct: 288 TQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPY 347
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
GA +F +Q G PD ++++AY AG + A F+ M++ G+ P+ K L+L
Sbjct: 348 GAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLL 407
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
SA + + + + + + G ++ + RLG ++E +
Sbjct: 408 SAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLF 458
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 116/271 (42%), Gaps = 3/271 (1%)
Query: 137 DWLAVLKQLKLMEH--PLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLL 194
D ++V QL+L + P+ L + E + + +F ++ Y ++ YG++ ++ E+T L
Sbjct: 121 DIISVAVQLRLNKKWGPIIL-ICEWIMNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYL 179
Query: 195 AMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG 254
+ I + T +++ Y K+G L+ AE F E++ G Y + + V+ G
Sbjct: 180 ELLESHCIPTEDTYALLLKAYCKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGG 239
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
+ + M ++ Y L+ Y S AQ +F+ ++ P+
Sbjct: 240 NNVKAVEIFHRMKRDGCQPTTDTYTMLINVYGKESKSHMAQNIFDEMRTQRCKPNICTFT 299
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
L+NA G +KA F+ M++AG EP ++ + + A E ++
Sbjct: 300 ALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHM 359
Query: 375 GFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
G + + + + R G+ E+ + V E
Sbjct: 360 GCEPDRASYNIMVDAYGRAGLHEDAQAVFEE 390
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 77/171 (45%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
NI +T +++ ++ + AE M+ G+ D ++ YS+AG A E F
Sbjct: 294 NICTFTALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIF 353
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G D+ SY MV AY RAG+ + + + EM + + + LL YS
Sbjct: 354 SLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSSA 413
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
GN + + + +G+ PD + ++N Y GQ K F M+K
Sbjct: 414 GNVAKCEDIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLFSTMQKG 464
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 81/208 (38%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E + Y ++ YG+ ++A+ MKR G + +++ YS AGN+ E+
Sbjct: 362 EPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSSAGNVAKCED 421
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
++ G D SM+ Y R G + E L M Y L+ Y
Sbjct: 422 IIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYG 481
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G E + +F+ + + PD I AY ++ F+ M AG P
Sbjct: 482 RAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLELFEKMIDAGCYPDGG 541
Query: 347 CVALILSACEKENQLNRALEFLIDLERD 374
++LSAC E Q+ + + + +D
Sbjct: 542 TAKVLLSACSSEEQIEQVTNVVRTMHKD 569
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 92/245 (37%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
L LLE Y ++ Y K ++ AE M++ G + + K
Sbjct: 179 LELLESHCIPTEDTYALLLKAYCKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKG 238
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
GN A E F +K G +Y ++ Y + + + EM Q +
Sbjct: 239 GNNVKAVEIFHRMKRDGCQPTTDTYTMLINVYGKESKSHMAQNIFDEMRTQRCKPNICTF 298
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
AL+ + G E A+ +FE +Q AG PD L+ +Y AG A F M+
Sbjct: 299 TALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQH 358
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
G EP +++ A + A +++R G ++ L + + G V +
Sbjct: 359 MGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSSAGNVAK 418
Query: 399 VEHVL 403
E ++
Sbjct: 419 CEDII 423
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 86/206 (41%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E +E ++ Y ++ Y + A M+ G D+ + +MV Y +AG +
Sbjct: 323 EAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHE 382
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A+ FEE+K +G +S+ ++ AY AG + + E ++ +M + + V ++L
Sbjct: 383 DAQAVFEEMKRIGITPTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSML 442
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
Y G + +F +Q D +LIN Y AG ++ FQ + LE
Sbjct: 443 NLYGRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGFVERMEELFQLLPAKNLE 502
Query: 343 PSDKCVALILSACEKENQLNRALEFL 368
P + A ++ R LE
Sbjct: 503 PDVVTWTSRIGAYSRKKLYKRCLELF 528
>gi|15218855|ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g03560, mitochondrial; Flags: Precursor
gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18 [Arabidopsis thaliana]
gi|332189465|gb|AEE27586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 98/243 (40%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E E + Y +++G M + +AE M+ D VT M+ Y KAG +
Sbjct: 215 ENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQ 274
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A E +++ G DK +Y +M+ A L +EMD + + V + ++
Sbjct: 275 KAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVI 334
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G G VFE + G P+ + +LI+ Y +G + A M G +
Sbjct: 335 GGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFK 394
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P +++++ K ++ AL++ DG + +L + G V+E E +
Sbjct: 395 PDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERL 454
Query: 403 LRE 405
E
Sbjct: 455 FEE 457
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 102/225 (45%), Gaps = 3/225 (1%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + + N+ YT +I GY K +++A L M GF D VT +V+V K G
Sbjct: 353 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 412
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ A + F + G ++ Y S++ +AG +D E L EM + S Y A
Sbjct: 413 VEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNA 472
Query: 281 LLRGYSMNGNSEGAQRVFEAI-QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ ++ + + A +F+ + + G +L++ ++++A + M
Sbjct: 473 LIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDK 532
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASC 384
G+ P+ C + + ++ RA + L +L G ++ +A+C
Sbjct: 533 GITPTAACFRALSTGLCLSGKVARACKILDELAPMGVIL--DAAC 575
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 85/207 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I Y +I GY K Q Q A L M+ RG D++T M+ + +
Sbjct: 256 DIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALY 315
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+ G + ++ ++ + G L+ G + M + +Y L+ GY+ +
Sbjct: 316 QEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKS 375
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G+ E A R+ + G PD ++++N G+ ++A F R GL +
Sbjct: 376 GSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFY 435
Query: 349 ALILSACEKENQLNRALEFLIDLERDG 375
+ ++ K +++ A ++ G
Sbjct: 436 SSLIDGLGKAGRVDEAERLFEEMSEKG 462
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 65/153 (42%)
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
EIK P+ + +++ ++ + GM++ + R+M + Y L+ G
Sbjct: 177 EIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAM 236
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
+ A+RVFE ++ I PD +I Y AGQ+QKA ++M G E
Sbjct: 237 FVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYM 296
Query: 350 LILSACEKENQLNRALEFLIDLERDGFMVGKEA 382
++ AC ++ + +++ G V A
Sbjct: 297 TMIQACYADSDFGSCVALYQEMDEKGIQVPPHA 329
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 102/247 (41%), Gaps = 43/247 (17%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++E F+ ++ Y+ +++G K +++ A + + G + + + ++ KAG
Sbjct: 388 MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGR 447
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE-----VYVGS 275
+ AE FEE+ G D Y +++ A+ + +D L + M+ +E VY
Sbjct: 448 VDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYT-- 505
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDA-----------------RMCALL-- 316
Y LL G +E A ++++ + GITP A R C +L
Sbjct: 506 --YTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDE 563
Query: 317 ---------------INAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQL 361
IN AG+ ++A + + G E + ++++A K +
Sbjct: 564 LAPMGVILDAACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKA 623
Query: 362 NRALEFL 368
+ A++ +
Sbjct: 624 DLAMKLM 630
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 38/202 (18%), Positives = 75/202 (37%), Gaps = 3/202 (1%)
Query: 206 VTLTVMVVMYSKAGNLKMAEE---TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVL 262
+T++ + G L M EE + ++K G +Y ++ V A +D E +
Sbjct: 185 MTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERV 244
Query: 263 LREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQM 322
M++ + Y +++GY G ++ A ++ G D +I A
Sbjct: 245 FEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYA 304
Query: 323 AGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEA 382
+Q M + G++ +L++ KE +LN ++ R G
Sbjct: 305 DSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAI 364
Query: 383 SCTLAAWFKRLGVVEEVEHVLR 404
L + + G VE+ +L
Sbjct: 365 YTVLIDGYAKSGSVEDAIRLLH 386
>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 104/243 (42%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E + ++ Y +++G M I++AE M + D VT +M+ Y KAG L+
Sbjct: 211 ENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQ 270
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A E F ++++ DK +Y +++ A D L EM+ + + + Y ++
Sbjct: 271 KAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVI 330
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G A VFE + G + + LI++Y G ++A F+ M+ G E
Sbjct: 331 GGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFE 390
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P +++++ K +L+ +E G + +L + G +E+ E++
Sbjct: 391 PDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENL 450
Query: 403 LRE 405
E
Sbjct: 451 FEE 453
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 95/216 (43%), Gaps = 5/216 (2%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
LYL++ E L E Y+ +I G K+ + A M ++G + T +
Sbjct: 310 LYLEMEERGL-----EIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTAL 364
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ YSK G+++ A FE +K G D +Y +V ++G LD G L + V
Sbjct: 365 IDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGV 424
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
+ + Y +L+ G G E A+ +FE + G D+ +I+A G+ +A
Sbjct: 425 AINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALA 484
Query: 332 AFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
F M + G + + +++ KE++ A++F
Sbjct: 485 LFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKF 520
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 6/213 (2%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
AN+ YT +I Y K ++ A MK GF D VT +V+V K+G L E
Sbjct: 356 ANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMEL 415
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
F+ + G ++ Y S++ +AG ++ E L EM + S Y A++ +
Sbjct: 416 FDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAK 475
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP---S 344
+G + A +F ++ G +LI+ ++++A + M G+ P S
Sbjct: 476 HGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVAS 535
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDGFM 377
+ +A+ L C K + RA + L DL G +
Sbjct: 536 FRALAIGLCLCGK---VARACKILDDLAPMGII 565
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 67/152 (44%)
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
F E+K G + + + S++ ++ G+++ + R M + Y L+ G
Sbjct: 170 VFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLV 229
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
+ E A++VFE + I PD ++I Y AG+ QKA F++M ++P
Sbjct: 230 NSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKI 289
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGFMV 378
++ AC E + L +++E G +
Sbjct: 290 TYMTLIQACYSERDFDTCLSLYLEMEERGLEI 321
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 55/299 (18%), Positives = 113/299 (37%), Gaps = 9/299 (3%)
Query: 106 FVKQIICVSPETGNLSDLLAAWVR--FMKPRRADWLAVLKQLKLMEHP-LYLQVAELALL 162
+V QI+ + + N+ L ++ R F+K VL+ ++L E P + ++ A
Sbjct: 81 WVAQILNLLDGSSNMEHNLDSFCRKFFVKLSPNFVTFVLQSVELREKPEVAVRFFFWAGK 140
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
++ + I + +I + +K RG + + ++ + GNL
Sbjct: 141 QKKYVHKIECHVSLIELLTFSADLVKIRLVFFELKDRGLLMTESAANSLIKSF---GNLG 197
Query: 223 MAEE---TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ EE + +K G +Y +V V + ++ E + MD ++ + Y
Sbjct: 198 LVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYN 257
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
+++GY G + A F ++ + PD LI A + + M +
Sbjct: 258 IMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEER 317
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
GLE +L++ K+ + A + + G L + + G +EE
Sbjct: 318 GLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEE 376
>gi|224120112|ref|XP_002331139.1| predicted protein [Populus trichocarpa]
gi|222872867|gb|EEF09998.1| predicted protein [Populus trichocarpa]
Length = 329
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 95/195 (48%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
++ FE +I I G K Q + A+ LL M +G + + V+ T ++ +Y K GN
Sbjct: 134 KKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYTTLIDIYCKEGNFV 193
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A++ F+E+K G + +Y ++ + + G + L EM A+ ++ Y +LL
Sbjct: 194 EAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAKGIFPDIYTYTSLL 253
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G + G + A +F ++ G+ + +I+ G+S++A+ + M +AGL
Sbjct: 254 HGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAIISGLSKEGRSEEAFKLYDEMTEAGLT 313
Query: 343 PSDKCVALILSACEK 357
P D+ ++S+ K
Sbjct: 314 PDDRVYTSLVSSLHK 328
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 82/165 (49%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
L ++E+ N+ YT +I Y K+ A+ MK+ G + VT V++ +SK
Sbjct: 165 LTMIEKGVVPNVVSYTTLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKK 224
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
G +K A E +E++ G D +Y S++ G LD L E+ + + + Y
Sbjct: 225 GRMKEAYELRDEMRAKGIFPDIYTYTSLLHGECIFGKLDDAVELFNEVRQKGLPLNVVTY 284
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
A++ G S G SE A ++++ + AG+TPD R+ L+++ A
Sbjct: 285 TAIISGLSKEGRSEEAFKLYDEMTEAGLTPDDRVYTSLVSSLHKA 329
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 94/230 (40%), Gaps = 35/230 (15%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I +G +I E M +G D TV++ K GN K A F+E+
Sbjct: 4 YTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFDELT 63
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG-------- 284
G + +YG+++ +AG ++ E+L+ EM + + V +Y L+ G
Sbjct: 64 EKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGLID 123
Query: 285 ------------------YSMNGNSEG---------AQRVFEAIQFAGITPDARMCALLI 317
Y++N ++G A+R + G+ P+ LI
Sbjct: 124 EAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYTTLI 183
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
+ Y G +A FQ M+KAG EP+ +++ K+ ++ A E
Sbjct: 184 DIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYEL 233
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 95/219 (43%), Gaps = 6/219 (2%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E+ AN+ Y +I G K +++ AE + M+ RG +Q+ ++ Y K G
Sbjct: 62 LTEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRG- 120
Query: 221 LKMAEETFEEIKLL---GEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
+ +E F+ ++ G D + ++ + + + L M + V
Sbjct: 121 --LIDEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVS 178
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y L+ Y GN A+++F+ ++ AG P+A +LI+ + G+ ++AY MR
Sbjct: 179 YTTLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMR 238
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
G+ P +L +L+ A+E ++ + G
Sbjct: 239 AKGIFPDIYTYTSLLHGECIFGKLDDAVELFNEVRQKGL 277
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 83/204 (40%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I GY K+ I A + M+++GF D TL + K + A+ +
Sbjct: 109 YNTLIDGYCKRGLIDEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMI 168
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + SY +++ Y + G + L +EM + Y L+ G+S G +
Sbjct: 169 EKGVVPNVVSYTTLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMK 228
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + ++ GI PD L++ + G+ A F +R+ GL + I+
Sbjct: 229 EAYELRDEMRAKGIFPDIYTYTSLLHGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAII 288
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
S KE + A + ++ G
Sbjct: 289 SGLSKEGRSEEAFKLYDEMTEAGL 312
Score = 38.1 bits (87), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 31/157 (19%), Positives = 66/157 (42%)
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI 301
+Y ++ + +G +D E + EM + + VY ++ GN++ A +F+ +
Sbjct: 3 TYTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFDEL 62
Query: 302 QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQL 361
G+ + LI+ AG+ + A M+ GL+ + ++ K +
Sbjct: 63 TEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGLI 122
Query: 362 NRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
+ A + + +E+ GF T+A ++L EE
Sbjct: 123 DEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEE 159
>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 730
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 89/225 (39%), Gaps = 35/225 (15%)
Query: 180 YGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLD 239
Y K + AE+ LAM+ G++ D T M+ MY K G + A +TF ++ G D
Sbjct: 513 YSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPD 572
Query: 240 KRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFE 299
+Y ++ Y R GM + E LRE A Y ++ YS +G A R+F
Sbjct: 573 VVTYNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFH 632
Query: 300 AIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKEN 359
+ GI PD+ + Y G +A + ++M K G +P + ++ A
Sbjct: 633 EMVSNGIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDEVTYRTLVDA----- 687
Query: 360 QLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
+ ++G EEVE +L+
Sbjct: 688 ------------------------------YCKIGKFEEVERILK 702
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 98/233 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ YGK A N L M+ G + + VT ++ + +AG A E + +
Sbjct: 226 YNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMV 285
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y S++ AY RAG +++ + +M S + AL+ + N N
Sbjct: 286 SKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFS 345
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
+FE +Q G+ PD L+ A+ G + F+ M+KAG EP +++
Sbjct: 346 EMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILI 405
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
A + ++AL + + G TL A R G E E +L E
Sbjct: 406 EAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDE 458
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 103/235 (43%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
NI Y +++ +G+ A +M +G D T T ++ YS+AG ++ A E +
Sbjct: 257 NIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIY 316
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+++ + ++ +++ + + V+ +M A V + +LL + N
Sbjct: 317 NQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKN 376
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G +VF ++ AG PD +LI AY G S +A + + M +AG P
Sbjct: 377 GMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATF 436
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+L+A +E + A L +L R + A ++ + G +E+++ ++
Sbjct: 437 NTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGGELEKLKEMV 491
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 84/203 (41%), Gaps = 3/203 (1%)
Query: 123 LLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGK 182
L +V F K ++ V + L++ + A LA+ + ++ + +I YGK
Sbjct: 494 LHTIYVPFTKILLKTFVLVYSKCSLVDEA---EDAFLAMRHHGYLSDTSTFNAMISMYGK 550
Query: 183 KMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRS 242
K + A +T ++ G D VT ++ MY + G + E T E G+ D S
Sbjct: 551 KGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVS 610
Query: 243 YGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQ 302
Y +++ +Y + G L + EM + + S Y + Y G A V + +
Sbjct: 611 YNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMH 670
Query: 303 FAGITPDARMCALLINAYQMAGQ 325
G PD L++AY G+
Sbjct: 671 KTGCKPDEVTYRTLVDAYCKIGK 693
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 95/233 (40%), Gaps = 1/233 (0%)
Query: 173 YTKIIHGYGKKMQI-QNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEI 231
Y II YGKK + +N MK +G D+ T + + + A E F ++
Sbjct: 155 YNVIIDLYGKKGRSWENILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQM 214
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
K D+ +Y +++ Y +AG + +L+EM++ Y LL + G
Sbjct: 215 KSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLC 274
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALI 351
A + +++ GI PD L++AY AG+ ++A + MR + P+ +
Sbjct: 275 NAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNAL 334
Query: 352 LSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
+ K + + D++ G +L F + G+ EV V R
Sbjct: 335 IGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFR 387
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/251 (19%), Positives = 102/251 (40%), Gaps = 3/251 (1%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+++ + E ++ YT ++ Y + +++ A M+ + T ++ M+ K
Sbjct: 283 SMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNK 342
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
N FE+++ G D ++ S++ A+ + GM + R M +
Sbjct: 343 NFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFN 402
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ Y G+S+ A +++ + AG TPD L+ A G+ + A + ++
Sbjct: 403 ILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRS 462
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEV 399
+P+D A +L A +L + E + L K T + + +V+E
Sbjct: 463 SYKPNDIAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEA 522
Query: 400 EH---VLREYG 407
E +R +G
Sbjct: 523 EDAFLAMRHHG 533
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 88/212 (41%)
Query: 187 QNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSM 246
+ A MK D+VT ++ +Y KAG A +E++ G + +Y +
Sbjct: 205 EEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNEL 264
Query: 247 VMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGI 306
+ A+ RAG+ + + M ++ + Y +LL YS G E A ++ ++ +
Sbjct: 265 LSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNC 324
Query: 307 TPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALE 366
TP++ LI + + F++M+ G+EP +L A K + L+
Sbjct: 325 TPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLK 384
Query: 367 FLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
+++ GF K L + R G ++
Sbjct: 385 VFRGMKKAGFEPDKATFNILIEAYGRCGSSDQ 416
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/239 (18%), Positives = 91/239 (38%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E +I + ++ +GK MK+ GF D+ T +++ Y + G+ A
Sbjct: 360 EPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALS 419
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
++ + G D ++ +++ A R G + E++L E++ Y ++L Y+
Sbjct: 420 IYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYA 479
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G E + + + + + + + Y +A AF MR G
Sbjct: 480 NGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTS 539
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++S K+ +++A + L G L + R G+ + E LRE
Sbjct: 540 TFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRE 598
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 1/145 (0%)
Query: 159 LALLEES-FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSK 217
ALL + E ++ Y ++ YG++ + E TL G D V+ ++ YSK
Sbjct: 561 FALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSYSK 620
Query: 218 AGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
G L A F E+ G D +Y + V YV GM +++ M
Sbjct: 621 HGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDEVT 680
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQ 302
Y+ L+ Y G E +R+ + I+
Sbjct: 681 YRTLVDAYCKIGKFEEVERILKFIK 705
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 82/222 (36%), Gaps = 2/222 (0%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRR-GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLL 234
I+ G G++ Q A M++ F D VT+ VM+ + + L F+ ++
Sbjct: 52 IMKGLGREGQWNKALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTVSRLFKSLREE 111
Query: 235 GEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS-EG 293
G PLD +Y S++ A R +M Y ++ Y G S E
Sbjct: 112 GYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWEN 171
Query: 294 AQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILS 353
+FE ++ GI PD I A ++A F M+ + P +L
Sbjct: 172 ILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALLD 231
Query: 354 ACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGV 395
K N A L ++E G + L + F R G+
Sbjct: 232 VYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGL 273
>gi|255661160|gb|ACU25749.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 426
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 106/218 (48%), Gaps = 4/218 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 213 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDK 272
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ Y +M++AY RAG++ + LL E+ + + ++ +L
Sbjct: 273 AAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDIAIHILA 331
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + + F MR G P
Sbjct: 332 G---AGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFP 388
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKE 381
+AL+L+A K ++ ++A + ++++ G + E
Sbjct: 389 ESNVIALVLNAYGKLHEFDKANDVYMEMQEVGCVFSDE 426
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 101/237 (42%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 113 NTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 172
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 173 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 232
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ KA FQ +R +G++
Sbjct: 233 LEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDKAAMLFQKLRSSGVDIDQVLY 292
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE V R+
Sbjct: 293 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAG----AGRIEEATWVFRQ 345
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + M+ G + + + ++ MY + A
Sbjct: 75 FTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEAL 134
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 135 SVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 194
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + ++ Y + +KA Q M+ G+E
Sbjct: 195 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIE 251
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L++A L G + + T+ ++R G+V + +
Sbjct: 252 PNSITYSTIISIWGKVGKLDKAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRL 311
Query: 403 LRE 405
L E
Sbjct: 312 LHE 314
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ A + L M++ D V + ++ + K + A F +K
Sbjct: 12 YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 71
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +M+ + +A + L+ EM V + Y LL Y N
Sbjct: 72 RSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFL 131
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF ++ D C ++I+ Y G +++A F MRK G+EP+
Sbjct: 132 EALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 32/172 (18%), Positives = 76/172 (44%), Gaps = 2/172 (1%)
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
D+ +Y +++ + + G+ D L++M+ V +Y L+ + A +F
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
++ +G TPD +IN + A ++A + MR AG+ P+ + +L+ +
Sbjct: 68 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVEN 127
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRE 410
+ AL ++ ++ + + +LG+ +E + + +G+R+
Sbjct: 128 KKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF--WGMRK 177
>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 653
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 104/243 (42%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E + ++ Y +++G M I++AE M + D VT +M+ Y KAG L+
Sbjct: 213 ENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQ 272
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A E F ++++ DK +Y +++ A D L EM+ + + + Y ++
Sbjct: 273 KAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVI 332
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G A VFE + G + + LI++Y G ++A F+ M+ G E
Sbjct: 333 GGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFE 392
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P +++++ K +L+ +E G + +L + G +E+ E++
Sbjct: 393 PDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENL 452
Query: 403 LRE 405
E
Sbjct: 453 FEE 455
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 95/216 (43%), Gaps = 5/216 (2%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
LYL++ E L E Y+ +I G K+ + A M ++G + T +
Sbjct: 312 LYLEMEERGL-----EIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTAL 366
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ YSK G+++ A FE +K G D +Y +V ++G LD G L + V
Sbjct: 367 IDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGV 426
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
+ + Y +L+ G G E A+ +FE + G D+ +I+A G+ +A
Sbjct: 427 AINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALA 486
Query: 332 AFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
F M + G + + +++ KE++ A++F
Sbjct: 487 LFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKF 522
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 6/213 (2%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
AN+ YT +I Y K ++ A MK GF D VT +V+V K+G L E
Sbjct: 358 ANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMEL 417
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
F+ + G ++ Y S++ +AG ++ E L EM + S Y A++ +
Sbjct: 418 FDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAK 477
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP---S 344
+G + A +F ++ G +LI+ ++++A + M G+ P S
Sbjct: 478 HGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVAS 537
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDGFM 377
+ +A+ L C K + RA + L DL G +
Sbjct: 538 FRALAIGLCLCGK---VARACKILDDLAPMGII 567
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 67/152 (44%)
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
F E+K G + + + S++ ++ G+++ + R M + Y L+ G
Sbjct: 172 VFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLV 231
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
+ E A++VFE + I PD ++I Y AG+ QKA F++M ++P
Sbjct: 232 NSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKI 291
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGFMV 378
++ AC E + L +++E G +
Sbjct: 292 TYMTLIQACYSERDFDTCLSLYLEMEERGLEI 323
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 55/299 (18%), Positives = 113/299 (37%), Gaps = 9/299 (3%)
Query: 106 FVKQIICVSPETGNLSDLLAAWVR--FMKPRRADWLAVLKQLKLMEHP-LYLQVAELALL 162
+V QI+ + + N+ L ++ R F+K VL+ ++L E P + ++ A
Sbjct: 83 WVAQILNLLDGSSNMEHNLDSFCRKFFVKLSPNFVTFVLQSVELREKPEVAVRFFFWAGK 142
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
++ + I + +I + +K RG + + ++ + GNL
Sbjct: 143 QKKYVHKIECHVSLIELLTFSADLVKIRLVFFELKDRGLLMTESAANSLIKSF---GNLG 199
Query: 223 MAEE---TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ EE + +K G +Y +V V + ++ E + MD ++ + Y
Sbjct: 200 LVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYN 259
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
+++GY G + A F ++ + PD LI A + + M +
Sbjct: 260 IMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEER 319
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
GLE +L++ K+ + A + + G L + + G +EE
Sbjct: 320 GLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEE 378
>gi|302789998|ref|XP_002976767.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
gi|300155805|gb|EFJ22436.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
Length = 669
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 142/329 (43%), Gaps = 37/329 (11%)
Query: 82 PNITEEQKQAISQFPRKMTKRCKAF--VKQIICVSPETGNLSDLLAAWVRFMKPRRA--- 136
P T E + PR TK F V +++ + +TGN+ L +W + + +
Sbjct: 57 PEETGESSASAKTIPR-YTKWTPQFARVDEVLKIVQKTGNVEAALESWDKSLSAKNIVTV 115
Query: 137 --------------DWLAVLKQL------------KLMEHPLYLQVAELALLEE----SF 166
+WL +L K++ + L+++E L+EE
Sbjct: 116 LNNINRWEKALAFFEWLKARPELYEINRYTYNVMLKILRNGRQLELSE-KLVEEMTGRGI 174
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
+ + ++ +I+ + Q + A MK G + D+VT ++ MY + G + A E
Sbjct: 175 QPDNYTFSTLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVE 234
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
+E++K + LD +YG++ Y RAG L++EM + + L+ S
Sbjct: 235 LYEKLKSVNWKLDTVTYGAIANVYARAGDYQSIMQLVQEMRDSGSSPNAVIMNTLMGTLS 294
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G A++VF ++ +G++P ++L+ Y G +A+ ++ ++ G +
Sbjct: 295 KAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTEGWKCDVA 354
Query: 347 CVALILSACEKENQLNRALEFLIDLERDG 375
++ AC + ++ +A + L +++R G
Sbjct: 355 VYNSLMKACVEGGRVEQAEDILKEMKRAG 383
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 86/174 (49%)
Query: 182 KKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKR 241
K ++ A+ M+ G VTL+++V MY++ G A E +E +K G D
Sbjct: 295 KAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTEGWKCDVA 354
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI 301
Y S++ A V G +++ E +L+EM Y+ + Y+ G + A+R+F+ +
Sbjct: 355 VYNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGMVDPARRMFDKV 414
Query: 302 QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
PD + ++I A ++AG+ ++A F M ++G D+ V+ +L +C
Sbjct: 415 VALNGKPDTPLFTVMIRACKLAGEIEQASKIFDEMMESGCCSPDERVSGMLLSC 468
>gi|255661174|gb|ACU25756.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 426
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 106/218 (48%), Gaps = 4/218 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 213 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDR 272
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ Y +M++AY RAG++ + LL E+ + + ++ +L
Sbjct: 273 AAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDIAIHILA 331
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + + F MR G P
Sbjct: 332 G---AGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDEMRGLGYFP 388
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKE 381
+AL+L+A K ++ ++A + ++++ G + E
Sbjct: 389 DSNVIALVLNAYGKLHEFDKANDVYMEMQEVGCVFSDE 426
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 101/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + M+ G D + + ++ MY + A
Sbjct: 75 FTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPDTASYSTLLTMYVENKKFLEAL 134
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 135 SVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 194
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + ++ Y + +KA Q M+ G+E
Sbjct: 195 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIE 251
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 252 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRL 311
Query: 403 LRE 405
L E
Sbjct: 312 LHE 314
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 100/233 (42%), Gaps = 4/233 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F ++
Sbjct: 117 YSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMR 176
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+G + SY +++ Y A + L R M + + Y +++ Y E
Sbjct: 177 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 236
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + +Q GI P++ + +I+ + G+ +A FQ +R +G++ ++
Sbjct: 237 KANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMI 296
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
A E+ + A L +L+R + A LA G +EE V R+
Sbjct: 297 VAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAG----AGRIEEATWVFRQ 345
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ A + L M++ D V + ++ + K + A F +K
Sbjct: 12 YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 71
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +M+ + +A + L+ EM V + Y LL Y N
Sbjct: 72 RSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPDTASYSTLLTMYVENKKFL 131
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF ++ D C ++I+ Y G +++A F MRK G+EP+
Sbjct: 132 EALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Score = 41.2 bits (95), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 32/172 (18%), Positives = 75/172 (43%), Gaps = 2/172 (1%)
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
D+ +Y +++ + + G+ D L++M+ V +Y L+ + A +F
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
++ +G TPD +IN + A ++A + MR AG+ P + +L+ +
Sbjct: 68 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPDTASYSTLLTMYVEN 127
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRE 410
+ AL ++ ++ + + +LG+ +E + + +G+R+
Sbjct: 128 KKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF--WGMRK 177
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 89/199 (44%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y+ +I GY + +I+ A L M G D ++ SKAG ++ A
Sbjct: 184 NVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYL 243
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
EI+ G D ++G+ ++ Y + G + EM + + +Y L+ G+
Sbjct: 244 LEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKA 303
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
GN A +F + G+ PD + C+ I+ G+ Q+A F +++ GL P
Sbjct: 304 GNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTY 363
Query: 349 ALILSACEKENQLNRALEF 367
+ ++S K+ ++ +A E
Sbjct: 364 SSLISGFCKQGEVEKAFEL 382
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 116/258 (44%), Gaps = 8/258 (3%)
Query: 123 LLAAWVRFMKPRRADWLAVL----KQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIH 178
LL R +KP + A + K K+ E Y +L+ N YT +I+
Sbjct: 243 LLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFD----EMLDHGLMPNNPLYTVLIN 298
Query: 179 GYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPL 238
G+ K + A + + G + D T + + K G ++ A + F E+K G
Sbjct: 299 GHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVP 358
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
D +Y S++ + + G +++ L EM + + +Y AL+ G +G+ + A+++F
Sbjct: 359 DVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLF 418
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
+ + G+ PD+ + +I+ Y + +A++ F M G++P ++ C KE
Sbjct: 419 DGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKE 478
Query: 359 NQLNRALEFLIDLERDGF 376
+ +A+ ++ + GF
Sbjct: 479 GDMEKAMNLFREMLQKGF 496
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 80/176 (45%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I Y II K +++ A LL ++ RG D VT ++ YSK G + A + F
Sbjct: 219 DIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYF 278
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+ G + Y ++ + +AG L + R + A V + A + G N
Sbjct: 279 DEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKN 338
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
G + A +VF ++ G+ PD + LI+ + G+ +KA+ M G+ P+
Sbjct: 339 GRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPN 394
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 99/253 (39%), Gaps = 6/253 (2%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N R + +I GY ++ + A L M++R + V+ M+ +L +A +
Sbjct: 114 NSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLL 173
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++ G + Y +++M Y G ++ LL M V Y A++ S
Sbjct: 174 EKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKA 233
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G E A IQ G+ PDA I Y G+ +A F M GL P++
Sbjct: 234 GKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLY 293
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV---LRE 405
++++ K L AL L G + + + G V+E V L+E
Sbjct: 294 TVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKE 353
Query: 406 YGLRE---TYSKI 415
GL TYS +
Sbjct: 354 KGLVPDVFTYSSL 366
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 96/217 (44%), Gaps = 3/217 (1%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKL 233
+ +I G+ ++ I M G + +T V++ K G ++ A E + +
Sbjct: 49 SALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMIT 108
Query: 234 LGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEG 293
LG + R++ ++ Y R + R LL EM+ + + + Y A++ G +
Sbjct: 109 LGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSL 168
Query: 294 AQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILS 353
A ++ E + F+G+ P+ + + LI Y G+ ++A M +G+ P C I+S
Sbjct: 169 ANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIIS 228
Query: 354 ACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWF 390
K ++ A +L++++ G K + T A+
Sbjct: 229 CLSKAGKMEEASTYLLEIQGRGL---KPDAVTFGAFI 262
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 110/255 (43%), Gaps = 4/255 (1%)
Query: 159 LALLEESFEANIR----DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
L LL+E + N+ Y +I+G + A L M G + V + +++
Sbjct: 135 LELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMG 194
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
Y+ G ++ A + + G D Y +++ +AG ++ L E+ + +
Sbjct: 195 YASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPD 254
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+ + A + GYS G A + F+ + G+ P+ + +LIN + AG +A + F+
Sbjct: 255 AVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFR 314
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
++ G+ P + + + K ++ AL+ +L+ G + +L + F + G
Sbjct: 315 HLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQG 374
Query: 395 VVEEVEHVLREYGLR 409
VE+ + E L+
Sbjct: 375 EVEKAFELHDEMCLK 389
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 88/201 (43%), Gaps = 18/201 (8%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L++ F A + +I GY K +IQ A M + + D VT T ++ + KAG
Sbjct: 491 MLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGK 549
Query: 221 LKMAEETFEEI---------------KLLGEPL--DKRSYGSMVMAYVRAGMLDRGEVLL 263
++ A F+E+ K++ + + D+ +YG ++ A+ + L L
Sbjct: 550 MEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLR 609
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
E+ + + ++ L+ + A ++ + + G+ P C+ L+ ++ A
Sbjct: 610 DEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEA 669
Query: 324 GQSQKAYTAFQNMRKAGLEPS 344
G+ +A F+ ++ GL P
Sbjct: 670 GKMDEATRVFEGVKSLGLVPD 690
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 44/245 (17%), Positives = 94/245 (38%), Gaps = 4/245 (1%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E+ N YT I G + ++ A+ T M++ G D + ++ + + G++
Sbjct: 3 EKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDID 62
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
+ + G P++ +Y ++ + G +++ +L+ M S + L+
Sbjct: 63 EVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLI 122
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
GY N A + + ++ + P A +IN A + M +GL+
Sbjct: 123 EGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLK 182
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASC--TLAAWFKRLGVVEEVE 400
P+ + ++ E ++ A L + G V + C + + + G +EE
Sbjct: 183 PNVVVYSTLIMGYASEGRIEEARRLLDGMSCSG--VAPDIFCYNAIISCLSKAGKMEEAS 240
Query: 401 HVLRE 405
L E
Sbjct: 241 TYLLE 245
>gi|384247929|gb|EIE21414.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
Length = 448
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 98/206 (47%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ YT II G Q++ A + M+ G +C+ T + ++ + KA L++A + +
Sbjct: 72 DVYTYTTIISQCGSHQQLRKALELVAEMRGHGVVCNVHTYSALMNVCIKANELELALDVY 131
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ G + +Y ++ + + G +L ++ Q Y +L + +
Sbjct: 132 GQLLREGCTPNLVTYNILIDIHGKMGNWQEAVQVLDALEDQGTKPEVRTYNTILSACNRS 191
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G E A RV+E + G P A LI+AY G+ ++A FQ+M + G E +
Sbjct: 192 GQPEHALRVYERMLADGAQPTATTYTALISAYGKTGKIEEALRIFQDMVRRGCERNVITY 251
Query: 349 ALILSACEKENQLNRALEFLIDLERD 374
+ ++SACEK + ALE L ++ RD
Sbjct: 252 SSLISACEKAGRWQLALELLDEMHRD 277
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 88/207 (42%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
AL ++ + +R Y I+ + Q ++A M G T T ++ Y K G
Sbjct: 168 ALEDQGTKPEVRTYNTILSACNRSGQPEHALRVYERMLADGAQPTATTYTALISAYGKTG 227
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A F+++ G + +Y S++ A +AG LL EM + +
Sbjct: 228 KIEEALRIFQDMVRRGCERNVITYSSLISACEKAGRWQLALELLDEMHRDNCKPNTVTFN 287
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
ALL + G + AQ VFE + G PDA A+LI+A+ Q +A A M+
Sbjct: 288 ALLSACAQGGQWKAAQDVFEQMPSCGCKPDAVSYAILISAFDRGNQWCRALQALDEMQGQ 347
Query: 340 GLEPSDKCVALILSACEKENQLNRALE 366
G P +++ A + L+ L+
Sbjct: 348 GHRPDVGVYNVVIEALTRSGVLSAQLK 374
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 88/192 (45%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y+ +++ K +++ A + + R G + VT +++ ++ K GN + A +
Sbjct: 107 NVHTYSALMNVCIKANELELALDVYGQLLREGCTPNLVTYNILIDIHGKMGNWQEAVQVL 166
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ ++ G + R+Y +++ A R+G + + M A + Y AL+ Y
Sbjct: 167 DALEDQGTKPEVRTYNTILSACNRSGQPEHALRVYERMLADGAQPTATTYTALISAYGKT 226
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G E A R+F+ + G + + LI+A + AG+ Q A M + +P+
Sbjct: 227 GKIEEALRIFQDMVRRGCERNVITYSSLISACEKAGRWQLALELLDEMHRDNCKPNTVTF 286
Query: 349 ALILSACEKENQ 360
+LSAC + Q
Sbjct: 287 NALLSACAQGGQ 298
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 84/222 (37%), Gaps = 6/222 (2%)
Query: 190 ENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEP------LDKRSY 243
E+ + A+ R F D L ++ K G A E F+ ++ L + D +Y
Sbjct: 17 ESAVAAVSRGLFYLDSRALAALLKELHKVGLSNRASELFDWLRSLPDNHELAHLCDVYTY 76
Query: 244 GSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQF 303
+++ L + L+ EM V Y AL+ E A V+ +
Sbjct: 77 TTIISQCGSHQQLRKALELVAEMRGHGVVCNVHTYSALMNVCIKANELELALDVYGQLLR 136
Query: 304 AGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNR 363
G TP+ +LI+ + G Q+A + G +P + ILSAC + Q
Sbjct: 137 EGCTPNLVTYNILIDIHGKMGNWQEAVQVLDALEDQGTKPEVRTYNTILSACNRSGQPEH 196
Query: 364 ALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
AL + DG L + + + G +EE + ++
Sbjct: 197 ALRVYERMLADGAQPTATTYTALISAYGKTGKIEEALRIFQD 238
>gi|255540881|ref|XP_002511505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550620|gb|EEF52107.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 876
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ II+ GK + A M +G + + VT +M+ + +KA N + A + + +++
Sbjct: 488 YSVIINCLGKAGHLAAAHKLFCEMVEQGCVPNLVTYNIMIALQAKARNYQSALKLYRDMQ 547
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G DK +Y ++ G LD E + EM + VY L+ + GN E
Sbjct: 548 SAGFQPDKVTYSIVMEVLGHCGYLDEAEAVFSEMKRKNWVPDEPVYGLLVDLWGKAGNVE 607
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + ++ + G+ P+ C L++A+ + AY Q+M + GL PS + L+L
Sbjct: 608 KAWQWYQTMLNTGLRPNVPTCNSLLSAFLRVHKLADAYNLLQSMLELGLNPSLQTYTLLL 667
Query: 353 SAC 355
S C
Sbjct: 668 SCC 670
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 115/259 (44%), Gaps = 6/259 (2%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++++ + N+ Y ++IH YG+ + +A + M+R G D+VT ++ +++KAG
Sbjct: 406 MVKDGCQPNVVTYNRLIHSYGRANYLNDAVDVFNEMQRVGCEPDRVTYCTLIDIHAKAGF 465
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A E ++ ++ G D +Y ++ +AG L L EM Q Y
Sbjct: 466 LDFALEMYQRMQAAGLSPDTFTYSVIINCLGKAGHLAAAHKLFCEMVEQGCVPNLVTYNI 525
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ + N + A +++ +Q AG PD ++++ G +A F M++
Sbjct: 526 MIALQAKARNYQSALKLYRDMQSAGFQPDKVTYSIVMEVLGHCGYLDEAEAVFSEMKRKN 585
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
P + L++ K + +A ++ + G +L + F R+ + +
Sbjct: 586 WVPDEPVYGLLVDLWGKAGNVEKAWQWYQTMLNTGLRPNVPTCNSLLSAFLRVHKLADAY 645
Query: 401 HVLR---EYGLR---ETYS 413
++L+ E GL +TY+
Sbjct: 646 NLLQSMLELGLNPSLQTYT 664
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 114/268 (42%), Gaps = 4/268 (1%)
Query: 131 MKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAE 190
M P +A+ VLKQL+ +H + L + F + YT ++ G+ Q
Sbjct: 345 MDPYQAN--QVLKQLQ--DHTVALNFFYWLKRQPGFNHDGHTYTTMVGILGRAKQFGAIN 400
Query: 191 NTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAY 250
L M + G + VT ++ Y +A L A + F E++ +G D+ +Y +++ +
Sbjct: 401 KLLDQMVKDGCQPNVVTYNRLIHSYGRANYLNDAVDVFNEMQRVGCEPDRVTYCTLIDIH 460
Query: 251 VRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDA 310
+AG LD + + M A + + Y ++ G+ A ++F + G P+
Sbjct: 461 AKAGFLDFALEMYQRMQAAGLSPDTFTYSVIINCLGKAGHLAAAHKLFCEMVEQGCVPNL 520
Query: 311 RMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLID 370
++I A Q A +++M+ AG +P ++++ L+ A +
Sbjct: 521 VTYNIMIALQAKARNYQSALKLYRDMQSAGFQPDKVTYSIVMEVLGHCGYLDEAEAVFSE 580
Query: 371 LERDGFMVGKEASCTLAAWFKRLGVVEE 398
++R ++ + L + + G VE+
Sbjct: 581 MKRKNWVPDEPVYGLLVDLWGKAGNVEK 608
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 101/217 (46%), Gaps = 4/217 (1%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
+ NI Y I++G K I+ A + + G D VT T ++ Y K+G + A+E
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 547
Query: 227 TFEEIKLLGEPLDKR--SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
+E +LG+ L ++ ++ + GML+ GE LL M A+ + + + +L++
Sbjct: 548 ILKE--MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQ 605
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
Y + N + A +++ + G+ PD + L+ + A ++A+ FQ M+ G S
Sbjct: 606 YCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVS 665
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDGFMVGKE 381
++++ K + A E + R+G KE
Sbjct: 666 VSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKE 702
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 110/249 (44%), Gaps = 1/249 (0%)
Query: 159 LALLE-ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSK 217
L L+E + + ++ Y+ +++GY + ++ + MKR+G + ++ + +
Sbjct: 269 LLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCR 328
Query: 218 AGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
L AEE F E+ G D Y +++ + + G + EM ++++
Sbjct: 329 ICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLT 388
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y A++ G+ G+ A ++F + G+ PD+ LIN Y AG + A+ +M
Sbjct: 389 YTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI 448
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
+AG P+ ++ KE L+ A E L ++ + G ++ + G +E
Sbjct: 449 QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 508
Query: 398 EVEHVLREY 406
E ++ E+
Sbjct: 509 EAVKLVGEF 517
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 83/197 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +IH + +I+ A + LL M+ +G+ D ++ + +V Y + G L +
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E +K G + YGS++ R L E EM Q + + VY L+ G+
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G+ A + F + ITPD +I+ + G +A F M GLEP
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 349 ALILSACEKENQLNRAL 365
+++ K + A
Sbjct: 425 TELINGYCKAGHMKDAF 441
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 103/260 (39%), Gaps = 8/260 (3%)
Query: 152 LYLQVAELALLEESFEANIRD--------YTKIIHGYGKKMQIQNAENTLLAMKRRGFIC 203
L ++ +LA EE+F IR YT +I G+ K+ I+ A M R
Sbjct: 325 LLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITP 384
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D +T T ++ + + G++ A + F E+ G D ++ ++ Y +AG + +
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
M Y L+ G G+ + A + + G+ P+ ++N +
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 324 GQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEAS 383
G ++A AGL ++ A K ++++A E L ++ G
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564
Query: 384 CTLAAWFKRLGVVEEVEHVL 403
L F G++E+ E +L
Sbjct: 565 NVLMNGFCLHGMLEDGEKLL 584
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 113/274 (41%), Gaps = 38/274 (13%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE-- 230
+T++I+GY K +++A M + G + VT T ++ K G+L A E E
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 231 ---------------------------IKLLGE------PLDKRSYGSMVMAYVRAGMLD 257
+KL+GE D +Y +++ AY ++G +D
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 543
Query: 258 RGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
+ + +L+EM + + + L+ G+ ++G E +++ + GI P+A L+
Sbjct: 544 KAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
Y + + A +++M G+ P K ++ K + A +++ GF
Sbjct: 604 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFS 663
Query: 378 VGKEA-SCTLAAWFKRLGVVE--EVEHVLREYGL 408
V S + + KR +E EV +R GL
Sbjct: 664 VSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 67/152 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + + I + +++G+ +++ E L M +G + T +V Y N
Sbjct: 552 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 611
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
LK A ++++ G D ++Y ++V + +A + L +EM + V Y
Sbjct: 612 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 671
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARM 312
L++G+ A+ VF+ ++ G+ D +
Sbjct: 672 LIKGFLKRKKFLEAREVFDQMRREGLAADKEI 703
>gi|7529747|emb|CAB86932.1| putative protein [Arabidopsis thaliana]
gi|24030379|gb|AAN41351.1| unknown protein [Arabidopsis thaliana]
Length = 526
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 10/211 (4%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ YT ++ YG+ + NAE M+ G +T +++ + + K AEE F
Sbjct: 116 NVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVF 175
Query: 229 EEIKLLGE---PL--DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
E LL E PL D++ Y M+ Y +AG ++ + M + V + Y +L+
Sbjct: 176 E--TLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLM- 232
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
S + + ++++ +Q + I PD ALLI AY A + ++A + F+ M AG+ P
Sbjct: 233 --SFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRP 290
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERD 374
+ K ++L A + +A + RD
Sbjct: 291 THKAYNILLDAFAISGMVEQAKTVFKSMRRD 321
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 86/191 (45%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M+R D V+ +++ Y +A + A FEE+ G ++Y ++ A+ +GM
Sbjct: 248 MQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGM 307
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
+++ + + + M ++ Y +L Y + EGA++ F+ I+ G P+
Sbjct: 308 VEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGT 367
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
LI Y A +K ++ MR +G++ + + I+ A + AL + ++E G
Sbjct: 368 LIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCG 427
Query: 376 FMVGKEASCTL 386
++A L
Sbjct: 428 VPPDQKAKNVL 438
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 67/143 (46%), Gaps = 3/143 (2%)
Query: 205 QVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLR 264
++ +++ Y K GN AE + +G + SY +++ +Y R G + E + R
Sbjct: 82 EIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFR 141
Query: 265 EMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI---QFAGITPDARMCALLINAYQ 321
M + + Y+ +L+ + + A+ VFE + + + + PD +M ++I Y+
Sbjct: 142 RMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYK 201
Query: 322 MAGQSQKAYTAFQNMRKAGLEPS 344
AG +KA F +M G+ S
Sbjct: 202 KAGNYEKARKVFSSMVGKGVPQS 224
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 3/126 (2%)
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ Y GN GA+RV + G TP+ L+ +Y G+ A F+ M+ +G
Sbjct: 88 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 147
Query: 341 LEPSDKCVALILSACEKENQLNRA---LEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
EPS +IL + ++ A E L+D ++ ++ + +K+ G E
Sbjct: 148 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 207
Query: 398 EVEHVL 403
+ V
Sbjct: 208 KARKVF 213
>gi|255661148|gb|ACU25743.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 425
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 105/224 (46%), Gaps = 12/224 (5%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 213 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDR 272
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ Y +M++AY RAG++ + LL E+ + + ++ +L
Sbjct: 273 AAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDIAIHILA 331
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + + F MR G P
Sbjct: 332 G---AGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFP 388
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLA 387
+AL+L+A K ++ ++A D +M +E C +
Sbjct: 389 DSNVIALVLNAYGKLHEFDKA--------NDVYMEMQEVGCVFS 424
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 101/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + M+ G + + + ++ MY + A
Sbjct: 75 FTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEAL 134
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 135 SIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 194
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + ++ Y + +KA Q M+ G+E
Sbjct: 195 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIE 251
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 252 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRL 311
Query: 403 LRE 405
L E
Sbjct: 312 LHE 314
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 101/237 (42%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 113 NTASYSTLLTMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 172
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 173 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 232
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G++
Sbjct: 233 LEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLY 292
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE V R+
Sbjct: 293 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAG----AGRIEEATWVFRQ 345
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 74/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ A + L M++ D V + ++ + K + A F +K
Sbjct: 12 YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 71
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +M+ + +A + L+ EM V + Y LL Y N
Sbjct: 72 RSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFL 131
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A +F ++ D C ++I+ Y G +++A F MRK G+EP+
Sbjct: 132 EALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 32/172 (18%), Positives = 76/172 (44%), Gaps = 2/172 (1%)
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
D+ +Y +++ + + G+ D L++M+ V +Y L+ + A +F
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
++ +G TPD +IN + A ++A + MR AG+ P+ + +L+ +
Sbjct: 68 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVEN 127
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRE 410
+ AL ++ ++ + + +LG+ +E + + +G+R+
Sbjct: 128 KKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF--WGMRK 177
>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Brachypodium distachyon]
Length = 556
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 102/202 (50%), Gaps = 1/202 (0%)
Query: 160 ALLEE-SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
A++E+ E +I Y + G + ++++A+ L M +G + V+ T ++ +++K
Sbjct: 347 AVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKE 406
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
G++ A F +++ G +Y M+ Y++ G + E +EM+ + + Y
Sbjct: 407 GDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTY 466
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
L+ G+ +NG + A R+FE ++ G P+ L++ G+S++A+ + +M
Sbjct: 467 AGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLA 526
Query: 339 AGLEPSDKCVALILSACEKENQ 360
AGL P D ++++ + +++
Sbjct: 527 AGLTPDDTLYSVLVGSLHTDSR 548
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 118/310 (38%), Gaps = 31/310 (10%)
Query: 82 PNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVR------------ 129
P + +AI+ P +T + V C S + LL R
Sbjct: 129 PAAADLLGKAIASCPASVTPLSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNS 188
Query: 130 ----FMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQ 185
+ + R D +A L LK ME+ E + YT ++ G +
Sbjct: 189 LLDSYTRQRNDDAVAGL--LKEMEN-------------RGVEPTVGTYTILVDGLSRAGD 233
Query: 186 IQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGS 245
I E MKR+ D + ++ Y + GN++ A E F+E G ++R+YG+
Sbjct: 234 ISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGA 293
Query: 246 MVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAG 305
++ + + G ++ E+LL +M + V V+ ++ GY +G E A + ++ G
Sbjct: 294 LINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMG 353
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
I D L + + A M + G+ P+ ++S KE + A
Sbjct: 354 IELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEAR 413
Query: 366 EFLIDLERDG 375
D+E G
Sbjct: 414 RLFRDMEGKG 423
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 101/235 (42%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
E N R Y +I+G+ K QI+ AE L M+ RG +Q+ M+ Y + G ++
Sbjct: 282 HGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEK 341
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A E ++ +G LD +Y ++ R ++ + LL M + V Y L+
Sbjct: 342 ALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLIS 401
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
++ G+ A+R+F ++ G P ++I+ Y G ++A + M K GL P
Sbjct: 402 IHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVP 461
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
A ++ +++ AL +++ G A L + + G EE
Sbjct: 462 DIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEE 516
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 97/206 (47%), Gaps = 3/206 (1%)
Query: 206 VTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLRE 265
++ +V+V + K+G++ A +E+ G L+ Y S++ +Y R D LL+E
Sbjct: 149 LSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKE 208
Query: 266 MDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQ 325
M+ + V Y L+ G S G+ + V++ ++ + D + +INAY G
Sbjct: 209 MENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGN 268
Query: 326 SQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCT 385
++A F G+EP+++ +++ K Q+ A L D++ G + T
Sbjct: 269 VRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNT 328
Query: 386 LAAWFKRLGVVE---EVEHVLREYGL 408
+ + R G+VE E++ V+ + G+
Sbjct: 329 MIDGYCRHGMVEKALEIKAVMEKMGI 354
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 98/240 (40%), Gaps = 3/240 (1%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
++ G+ K + +A L + R G + ++ Y++ N +E++ G
Sbjct: 154 VVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMENRG 213
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
+Y +V RAG + + E + EM + V Y A++ Y GN A
Sbjct: 214 VEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRAS 273
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
VF+ G+ P+ R LIN + GQ + A +M+ G+ + ++
Sbjct: 274 EVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGY 333
Query: 356 EKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE---HVLREYGLRETY 412
+ + +ALE +E+ G + TLA R+ +E+ + H++ E G+ Y
Sbjct: 334 CRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNY 393
>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
Length = 1161
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 106/241 (43%), Gaps = 1/241 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+G+ ++ +I +A M R+ + T T M+ Y + + A E++
Sbjct: 333 YNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQ 392
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ G + +Y +++ Y + ML L+ ++ ++ + + + L+ G+ G
Sbjct: 393 ITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEIS 452
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+++ +++ GI PD + LIN + + M+K+G+ P+D ++
Sbjct: 453 KAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLI 512
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRETY 412
K + AL+ +D+ R G + L F R G++ E EH R+Y R
Sbjct: 513 CYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEH-FRQYMSRMNI 571
Query: 413 S 413
S
Sbjct: 572 S 572
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 92/220 (41%), Gaps = 1/220 (0%)
Query: 185 QIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYG 244
+ + AE+ L MK I + VT ++ Y K G K A E+++ D +Y
Sbjct: 241 EFRKAEDMLQKMKS-CHISNSVTYNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYN 299
Query: 245 SMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFA 304
M+ R R +LL+ M ++ Y L+ G+ G A+ VF +
Sbjct: 300 IMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQ 359
Query: 305 GITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
+ P +I+ Y + KA + M+ G+ PS+ + +L+ K + L A
Sbjct: 360 NLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPA 419
Query: 365 LEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
+ + DL+ G + K L F ++G + + + +L+
Sbjct: 420 IYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILK 459
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/196 (19%), Positives = 90/196 (45%), Gaps = 8/196 (4%)
Query: 123 LLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELA--------LLEESFEANIRDYT 174
+L + M+ ++ + + K ++ + + QV E++ + E+ + ++ Y+
Sbjct: 415 MLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYS 474
Query: 175 KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLL 234
+I+G + ++ + L M++ G + + V T ++ Y KAG +K A + F +I
Sbjct: 475 ALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRR 534
Query: 235 GEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGA 294
G + + +++ A+ R GM+ E + M + S + ++ Y GN GA
Sbjct: 535 GLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGA 594
Query: 295 QRVFEAIQFAGITPDA 310
V++ + G +P+
Sbjct: 595 FSVYDDMVRYGYSPNV 610
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 91/207 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L ++ ++ YT +I GY + +I A + L M+ G + ++T + ++ Y K
Sbjct: 356 MLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSM 415
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A E++K G ++K ++ + + G + + + +L+ M + Y A
Sbjct: 416 LGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSA 475
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G + + +Q +GI P+ + LI Y AG ++A F ++ + G
Sbjct: 476 LINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRG 535
Query: 341 LEPSDKCVALILSACEKENQLNRALEF 367
L + +L A +E + A F
Sbjct: 536 LVANPVIHNALLHAFYREGMITEAEHF 562
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/239 (17%), Positives = 104/239 (43%), Gaps = 2/239 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+ +E A+ Y +++GY K + + + M + + + +++ Y K G
Sbjct: 742 ICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQ 801
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ ++ + G D +Y +++ G++D L +M + ++ V+
Sbjct: 802 FSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDI 861
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ +S A +VF +++ ++P ++ + +IN G ++ M + G
Sbjct: 862 LITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVG 921
Query: 341 LEPSD-KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
L+P+ +AL+ + C + +++RA +++ G + + A ++ R G +EE
Sbjct: 922 LQPNHTHYIALVNAKC-RVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEE 979
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 95/217 (43%), Gaps = 1/217 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y ++HGY K+ Q + M R+G D VT ++++ S+ G + +A +
Sbjct: 785 NSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFL 844
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++ L G D+ + ++ A+ + + M + S+ + A++ G
Sbjct: 845 EKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRK 904
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + + +V + G+ P+ L+NA G+ +A+ + M+ G+ P++
Sbjct: 905 GYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAE 964
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCT 385
+ I+ + +L A+ + R G MV A+ T
Sbjct: 965 SSIIRGLCRCGKLEEAVIVFSSMMRSG-MVPTVATFT 1000
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/278 (18%), Positives = 108/278 (38%), Gaps = 42/278 (15%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
+N Y I+H Y KK + + A L M+R D T +M+ K +K +
Sbjct: 258 SNSVTYNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMI---DKLCRIKRSTRA 314
Query: 228 FEEIKLLGE---PLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
F +K + + D+ +Y +++ + R G ++ + M Q + Y ++ G
Sbjct: 315 FLLLKRMRKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDG 374
Query: 285 YSMNGNSEGAQRVFEAIQFAGITP-----------------------------------D 309
Y N + A + +Q G+ P +
Sbjct: 375 YCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITIN 434
Query: 310 ARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLI 369
M +LI+ + G+ KA ++M + G++P + +++ + +++ E L
Sbjct: 435 KTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILS 494
Query: 370 DLERDGFMVGKEASCTLAAWFKRLGVVEE-VEHVLREY 406
+++ G + TL ++ + G V+E ++H + Y
Sbjct: 495 RMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIY 532
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 65/164 (39%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+ +II Y + I A + M R G+ + T ++ + G+L A + +
Sbjct: 578 FNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLL 637
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ +D++++ ++++ R G LD L +M Y LL G+ G
Sbjct: 638 DIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKIL 697
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
A + + + G+ PD L+N GQ + A F +
Sbjct: 698 PALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEI 741
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 89/230 (38%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
+I + +K ++ NA MK T + M+ + G L + + E+ +G
Sbjct: 862 LITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVG 921
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
+ Y ++V A R G +DR L EM A + +++RG G E A
Sbjct: 922 LQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAV 981
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
VF ++ +G+ P L+++ + A + M L ++++
Sbjct: 982 IVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITGL 1041
Query: 356 EKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
K+ ++ AL+ +++ G TL G V+ E +L +
Sbjct: 1042 CKDKHISDALDLYGEMKSKGLWPNITTYITLTGAMYSTGRVQNGEELLED 1091
>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 739
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 100/228 (43%), Gaps = 3/228 (1%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+LL F + YT + GY + + +A + M RG + T T ++ AG
Sbjct: 97 SLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAG 156
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A F ++ G D Y +MV AG E LL + A+ VY
Sbjct: 157 MVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYN 216
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
AL+ GY G+ E A VFE + G +P+ R LI+ + + + +A F M A
Sbjct: 217 ALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDA 276
Query: 340 GLEPSDKC-VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
GL P+ ALI C + QL+ A L +E G +V E +C++
Sbjct: 277 GLVPNVVTYTALIQGQC-SDGQLDCAYRLLQSMENSG-LVPNEWTCSV 322
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 79/158 (50%), Gaps = 3/158 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++HG + + AE L GF + V ++ Y G+L++A + FE +
Sbjct: 180 YATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMD 239
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ G + R+Y ++ + ++ LDR +L M + Y AL++G +G +
Sbjct: 240 VNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLD 299
Query: 293 GAQRVFEAIQFAGITPDARMCALLINA---YQMAGQSQ 327
A R+ ++++ +G+ P+ C++LI+A ++ G++Q
Sbjct: 300 CAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQ 337
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 90/214 (42%), Gaps = 8/214 (3%)
Query: 153 YLQVAELALLEESFE--------ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICD 204
Y V +L L + FE N+R YT++I G+ K ++ A M G + +
Sbjct: 222 YCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPN 281
Query: 205 QVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLR 264
VT T ++ G L A + ++ G ++ + ++ A + + ++LL
Sbjct: 282 VVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLG 341
Query: 265 EMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAG 324
+ + + V VY +L+ G G A R+ + + G PDA + LI+
Sbjct: 342 SLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQK 401
Query: 325 QSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
+ +A +M + G++PS +I+ +E
Sbjct: 402 ELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVRE 435
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 84/193 (43%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+L+++ + N YT +I G K + A+ + + +GF+ D T + ++ +
Sbjct: 342 SLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQK 401
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
L A +++ G +Y ++ VR D + +L +M A + Y
Sbjct: 402 ELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYT 461
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
+R Y G E A+ + + G+ P+ LI Y G + +A++ F++M
Sbjct: 462 IFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVAN 521
Query: 340 GLEPSDKCVALIL 352
G +P+++ ++L
Sbjct: 522 GCKPNEESYTVLL 534
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 32/169 (18%), Positives = 73/169 (43%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
+I K ++ A+ L ++ ++G +++ T ++ KAG A+ + + G
Sbjct: 323 LIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQG 382
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
D +Y S++ R L ++L +M + V Y ++ ++G++
Sbjct: 383 FVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSK 442
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
++ + + AGI PD + + +Y G+ + A +M G+ P+
Sbjct: 443 KILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPN 491
>gi|356540087|ref|XP_003538522.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Glycine max]
Length = 667
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 93/198 (46%), Gaps = 4/198 (2%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
+ N+ Y +I+ YGK ++ + A N + M +RG + +T + ++ ++ KAG L A
Sbjct: 386 QQNVVTYNTMINIYGKTLEHEKATNLIQEMNKRGIEPNAITYSTIISIWEKAGKLDRAAI 445
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
F++++ G +D+ Y +M++AY R G++ + LL E+ + L R
Sbjct: 446 LFQKLRSSGVRIDEVLYQTMIVAYERTGLVAHAKRLLHELKRPDNIPRDTAIAILARA-- 503
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G E A VF A D + +IN + + F+ MR+ G P
Sbjct: 504 --GRIEEATWVFRQAFDAREVKDISVFGCMINLFSKNKKYANVVEVFEKMREVGYFPDSD 561
Query: 347 CVALILSACEKENQLNRA 364
+AL+L+A K + ++A
Sbjct: 562 VIALVLNAFGKLREFDKA 579
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 99/251 (39%), Gaps = 3/251 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+ +GK + A L M+ D V+ + ++ +Y A F E+
Sbjct: 252 YNSMINVFGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFSEMN 311
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
PLD + M+ Y + M + L M + Y LLR Y
Sbjct: 312 EAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVISYNTLLRVYGEADLFG 371
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +F +Q + + +IN Y + +KA Q M K G+EP+ + I+
Sbjct: 372 EAIHLFRLMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMNKRGIEPNAITYSTII 431
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRETY 412
S EK +L+RA L G + + T+ ++R G+V + +L E +
Sbjct: 432 SIWEKAGKLDRAAILFQKLRSSGVRIDEVLYQTMIVAYERTGLVAHAKRLLHELKRPDN- 490
Query: 413 SKIPGSRSIAL 423
IP +IA+
Sbjct: 491 --IPRDTAIAI 499
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 73/172 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK ++ L M++ D V + ++ + K + A F +K
Sbjct: 182 YSTLITCFGKHGLFDSSLFWLQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLK 241
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
D +Y SM+ + +A + +LL+EM V + Y LL Y N
Sbjct: 242 ASTITPDLIAYNSMINVFGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFV 301
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A +F + A D C ++I+ Y ++A F +MRK G++P+
Sbjct: 302 EALSLFSEMNEAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPN 353
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 70/170 (41%), Gaps = 8/170 (4%)
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
+A +A F+E++ G D+ +Y +++ + + G+ D L++M+ V
Sbjct: 156 RAKQWHLAHGLFDEMRQKGLSPDRYTYSTLITCFGKHGLFDSSLFWLQQMEQDNVSGDLV 215
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
+Y L+ + A +F ++ + ITPD +IN + A ++A Q M
Sbjct: 216 LYSNLIDLARKLSDYSKAISIFSRLKASTITPDLIAYNSMINVFGKAKLFREARLLLQEM 275
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
R ++P + +L+ + AL ++ EA C L
Sbjct: 276 RDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFSEM--------NEAKCPL 317
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 111/261 (42%), Gaps = 6/261 (2%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+LE+ ++ Y I++G K+ + A+ M RG D T T ++ YSK GN
Sbjct: 298 MLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGN 357
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A FE + D +Y +++ + + +++ L +M ++ +Y Y
Sbjct: 358 MNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGI 417
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ GY G A R+++ + G C ++ Y AG + KA NM G
Sbjct: 418 LINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKG 477
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+ P +++ KE ++RA + +E G + + F R G ++E E
Sbjct: 478 IVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAE 537
Query: 401 HVLR---EYGL---RETYSKI 415
++ E G+ R TY+ +
Sbjct: 538 LIMLKMIERGVNPDRSTYTSL 558
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 75/174 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+GY + A M +GF +T +V Y +AGN A+E +
Sbjct: 415 YGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNML 474
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
L G D +Y +++ +++ +DR L+ +M+ + Y +L G+S G +
Sbjct: 475 LKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQ 534
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
A+ + + G+ PD LIN + ++A+ M + G P DK
Sbjct: 535 EAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDDK 588
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 91/206 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + N+ +I+ K +I+N ++ L M+ +G D VT ++ Y + G
Sbjct: 88 VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGL 147
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ A E + + G +Y +++ + G R + +L EM + + Y
Sbjct: 148 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNI 207
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL N N A+R+F+ + G+ PD + LI G +A F++M+ AG
Sbjct: 208 LLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAG 267
Query: 341 LEPSDKCVALILSACEKENQLNRALE 366
L P + +++ + ++ AL+
Sbjct: 268 LAPDNVIYTILIGGFCRNGVMSEALK 293
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 67/160 (41%)
Query: 185 QIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYG 244
+ +AE M +G + D V+ + ++ + SK G L A + F ++K G D Y
Sbjct: 217 NMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYT 276
Query: 245 SMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFA 304
++ + R G++ + EM Q + Y +L G A +F +
Sbjct: 277 ILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTER 336
Query: 305 GITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
G+ PD LIN Y G KA T F+ M + L+P
Sbjct: 337 GVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPD 376
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 89/220 (40%), Gaps = 11/220 (5%)
Query: 160 ALLEESFE-----------ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTL 208
LLEE+FE + Y II+G K + A+ L M + G D T
Sbjct: 146 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 205
Query: 209 TVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
+++V + N+ AE F+E+ G D S+ +++ + G LD+ R+M
Sbjct: 206 NILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKN 265
Query: 269 QEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
+ + +Y L+ G+ NG A +V + + G D ++N +
Sbjct: 266 AGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSE 325
Query: 329 AYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFL 368
A F M + G+ P +++ K+ +N+A+
Sbjct: 326 ADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLF 365
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 70/159 (44%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
MK G D V T+++ + + G + A + +E+ G LD +Y +++ + M
Sbjct: 263 MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKM 322
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
L + L EM + V+ + L+ GYS +GN A +FE + + PD
Sbjct: 323 LSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNT 382
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSA 354
LI+ + + +K + +M + P+ ++++
Sbjct: 383 LIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILING 421
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 83/208 (39%)
Query: 198 RRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLD 257
R G + TL +M+ K ++ + +++ G D +Y +++ AY R G+L+
Sbjct: 90 RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLE 149
Query: 258 RGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
L+ M + + Y A++ G G A+ V + + G++PD +L+
Sbjct: 150 EAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILL 209
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
A F M G+ P + ++ K L++AL++ D++ G
Sbjct: 210 VECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLA 269
Query: 378 VGKEASCTLAAWFKRLGVVEEVEHVLRE 405
L F R GV+ E V E
Sbjct: 270 PDNVIYTILIGGFCRNGVMSEALKVRDE 297
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 58/140 (41%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
+ + ++V Y +A L+ E F +K G + + S++ V+ G +D +
Sbjct: 26 NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 85
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
+E+ V V ++ N E + ++ G+ PD LINAY
Sbjct: 86 QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 145
Query: 324 GQSQKAYTAFQNMRKAGLEP 343
G ++A+ +M GL+P
Sbjct: 146 GLLEEAFELMDSMSGKGLKP 165
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 97/209 (46%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ +T +IH K ++ A + M+ RG ++VT T ++ + K G L A
Sbjct: 150 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 209
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
EE++ G Y +++ Y + G +D L+REM+A+ V Y ++ GY
Sbjct: 210 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKV 269
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
GN + A ++ + + G+ PDA + LI + A F+NM + G++P +
Sbjct: 270 GNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTY 329
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFM 377
++ KE + +AL ++ R G +
Sbjct: 330 TTLIDGHCKEGNVEKALSLHDEMIRKGVL 358
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 93/208 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ E ++ Y ++ GY K + + M +RG + D VT T ++ KAGN
Sbjct: 107 MVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGN 166
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ A +++ G +++ ++ +++ + + G LD + + EM + Y A
Sbjct: 167 LEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNA 226
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ GY G + A+ + ++ + PD + +I+ Y G A+ Q M K G
Sbjct: 227 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 286
Query: 341 LEPSDKCVALILSACEKENQLNRALEFL 368
+ P + ++ +E +LN A E
Sbjct: 287 VLPDAITYSSLIRGLCEEKRLNDACELF 314
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 91/213 (42%)
Query: 155 QVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
+V L E + + N+ + +++G K +++ A M R G D V+ ++
Sbjct: 66 RVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSG 125
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
Y K G L + F E+ G D ++ S++ A +AG L++ L+ +M + + +
Sbjct: 126 YCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMN 185
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+ AL+ G+ G + A E ++ GI P LIN Y G+ A +
Sbjct: 186 EVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIR 245
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
M ++P + I+S K L+ A +
Sbjct: 246 EMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQL 278
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 88/209 (42%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E N +T +I G+ KK + +A + M++ G V ++ Y K G +
Sbjct: 179 ERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMD 238
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
+A E E++ D +Y +++ Y + G LD L ++M + V + Y +L+
Sbjct: 239 LARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLI 298
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
RG A +FE + G+ PD LI+ + G +KA + M + G+
Sbjct: 299 RGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVL 358
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDL 371
P +++++ K + A L L
Sbjct: 359 PDVVTYSVLINGLSKSARTKEAHRLLFKL 387
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 90/205 (43%), Gaps = 1/205 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFI-CDQVTLTVMVVMYSKAGNLKMAEET 227
N Y ++ + + ++ AE + M+ G + VT MV KAG ++ A +
Sbjct: 44 NAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKV 103
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
F+E+ G D SY +++ Y + G L + EM + + + +L+
Sbjct: 104 FDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCK 163
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
GN E A + ++ G+ + LI+ + G A A + MRK G++PS C
Sbjct: 164 AGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVC 223
Query: 348 VALILSACEKENQLNRALEFLIDLE 372
+++ K +++ A E + ++E
Sbjct: 224 YNALINGYCKLGRMDLARELIREME 248
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 101/241 (41%), Gaps = 7/241 (2%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y ++ + +++ A + M+ G + VT +V + +AG L AE
Sbjct: 9 NVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERV- 67
Query: 229 EEIKLLGEPLDKR----SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
+ L+ E + + ++ SMV +AG ++ + EM + + Y LL G
Sbjct: 68 --VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSG 125
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
Y G + VF + G+ PD LI+A AG ++A MR+ GL +
Sbjct: 126 YCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMN 185
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
+ ++ K+ L+ AL + ++ + G L + +LG ++ ++R
Sbjct: 186 EVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIR 245
Query: 405 E 405
E
Sbjct: 246 E 246
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/252 (19%), Positives = 107/252 (42%), Gaps = 15/252 (5%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y+ II GY K + +A M ++G + D +T + ++ + L A E F
Sbjct: 255 DVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELF 314
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E + LG D+ +Y +++ + + G +++ L EM + V Y L+ G S +
Sbjct: 315 ENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKS 374
Query: 289 GNSEGAQRV---------------FEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAF 333
++ A R+ ++A+ + + L+ + M G ++A +
Sbjct: 375 ARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVY 434
Query: 334 QNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRL 393
Q+M + ++++ + + +AL F + R GF ++ +L
Sbjct: 435 QSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEE 494
Query: 394 GVVEEVEHVLRE 405
G+V E ++ +++
Sbjct: 495 GMVVEADNAIQD 506
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 101/233 (43%), Gaps = 24/233 (10%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I G+ K+ ++ A + M R+G + D VT +V++ SK+ K A K
Sbjct: 329 YTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLL--FK 386
Query: 233 LLGE-PL-DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
L E P+ D Y ++++ +A + ALL+G+ M G
Sbjct: 387 LYHEDPVPDNIKYDALMLCCSKAEF--------------------KSVVALLKGFCMKGL 426
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
+ A +V++++ D + ++LI+ + G +KA + + M ++G P+
Sbjct: 427 MKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTIS 486
Query: 351 ILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
++ +E + A + DL + EAS L ++ G V+ + VL
Sbjct: 487 LVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVL 539
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 113/274 (41%), Gaps = 35/274 (12%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
+ +LE + ++ Y +I G+ K QI +A M+ RGF D VT +M+
Sbjct: 120 MEILETYGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSR 179
Query: 219 GNLKMAEET-----------------------------------FEEIKLLGEPLDKRSY 243
G L++A E F+E+ G D +Y
Sbjct: 180 GKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTY 239
Query: 244 GSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQF 303
+++ + GM DR +R + A+ Y LLR + E +R+ + +
Sbjct: 240 NAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVL 299
Query: 304 AGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNR 363
+G P+ ++LI+++ G+ ++A + M++ GL P ++SA KE +L+
Sbjct: 300 SGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDL 359
Query: 364 ALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
A+E+L + DG + T+ A + G +
Sbjct: 360 AIEYLEKMVSDGCLPDIVNYNTILATLCKFGCAD 393
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 88/208 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y ++ + K + ++ E + M G + VT ++++ + + G ++ A
Sbjct: 270 DVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVL 329
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E +K G D SY ++ A+ + G LD L +M + Y +L
Sbjct: 330 EVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKF 389
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G ++ A VFE + G P R + +A G KA M + G++P +
Sbjct: 390 GCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITY 449
Query: 349 ALILSACEKENQLNRALEFLIDLERDGF 376
++S ++ ++ A+ L+D+E F
Sbjct: 450 NSLISCLCRDGLVDEAIGLLVDMEATRF 477
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 73/177 (41%), Gaps = 1/177 (0%)
Query: 199 RGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDR 258
+GF D V T ++ + + NLK A E ++ G+P D SY +M+ + +A +D
Sbjct: 91 KGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYGDP-DVYSYNAMISGFSKANQIDS 149
Query: 259 GEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLIN 318
+ M ++ Y ++ G E A V + + G P +LI
Sbjct: 150 ANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIE 209
Query: 319 AYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
A + G+ +A F + GL P I+ KE +RAL+F+ L G
Sbjct: 210 ATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARG 266
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 83/209 (39%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E N+ ++ +I + ++ +++ A N L MK +G D + ++ + K G L +A E
Sbjct: 303 EPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIE 362
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
E++ G D +Y +++ + G D + ++D Y +
Sbjct: 363 YLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALW 422
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
GN A + + GI PD LI+ G +A +M +P+
Sbjct: 423 SCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVI 482
Query: 347 CVALILSACEKENQLNRALEFLIDLERDG 375
++L K +++ +E LI + G
Sbjct: 483 SFNIVLLGMCKAHRVFEGIELLITMVEKG 511
>gi|42572723|ref|NP_974457.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332646343|gb|AEE79864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 10/211 (4%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ YT ++ YG+ + NAE M+ G +T +++ + + K AEE F
Sbjct: 180 NVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVF 239
Query: 229 EEIKLLGE---PL--DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
E LL E PL D++ Y M+ Y +AG ++ + M + V + Y +L+
Sbjct: 240 E--TLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLM- 296
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
S + + ++++ +Q + I PD ALLI AY A + ++A + F+ M AG+ P
Sbjct: 297 --SFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRP 354
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERD 374
+ K ++L A + +A + RD
Sbjct: 355 THKAYNILLDAFAISGMVEQAKTVFKSMRRD 385
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 86/191 (45%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M+R D V+ +++ Y +A + A FEE+ G ++Y ++ A+ +GM
Sbjct: 312 MQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGM 371
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
+++ + + + M ++ Y +L Y + EGA++ F+ I+ G P+
Sbjct: 372 VEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGT 431
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
LI Y A +K ++ MR +G++ + + I+ A + AL + ++E G
Sbjct: 432 LIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCG 491
Query: 376 FMVGKEASCTL 386
++A L
Sbjct: 492 VPPDQKAKNVL 502
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 67/143 (46%), Gaps = 3/143 (2%)
Query: 205 QVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLR 264
++ +++ Y K GN AE + +G + SY +++ +Y R G + E + R
Sbjct: 146 EIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFR 205
Query: 265 EMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI---QFAGITPDARMCALLINAYQ 321
M + + Y+ +L+ + + A+ VFE + + + + PD +M ++I Y+
Sbjct: 206 RMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYK 265
Query: 322 MAGQSQKAYTAFQNMRKAGLEPS 344
AG +KA F +M G+ S
Sbjct: 266 KAGNYEKARKVFSSMVGKGVPQS 288
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 3/126 (2%)
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ Y GN GA+RV + G TP+ L+ +Y G+ A F+ M+ +G
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 211
Query: 341 LEPSDKCVALILSACEKENQLNRA---LEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
EPS +IL + ++ A E L+D ++ ++ + +K+ G E
Sbjct: 212 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 271
Query: 398 EVEHVL 403
+ V
Sbjct: 272 KARKVF 277
>gi|356516744|ref|XP_003527053.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Glycine max]
Length = 882
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 5/204 (2%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
+Y ++ E+ L ++F Y+ +I+ GK + A M +G + + VT ++
Sbjct: 478 MYERMQEVGLSPDTFT-----YSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNIL 532
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ + +KA N + A + + +++ G DK +Y ++ G L+ E + EM
Sbjct: 533 IALQAKARNYQTALKLYRDMQNAGFKPDKVTYSIVMEVLGYCGYLEEAEAVFFEMKQNNW 592
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
VY L+ + GN E A + A+ AG+ P+ C L++A+ + AY
Sbjct: 593 VPDEPVYGLLIDLWGKAGNVEKAWEWYHAMLRAGLLPNVPTCNSLLSAFLRVHRLPDAYN 652
Query: 332 AFQNMRKAGLEPSDKCVALILSAC 355
QNM GL PS + L+LS C
Sbjct: 653 LLQNMVTLGLNPSLQTYTLLLSCC 676
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 110/245 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++++ + N+ Y ++IH YG+ + A N M+ G D+VT ++ +++KAG
Sbjct: 412 MVKDGCQPNVVTYNRLIHSYGRANYLGEALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGF 471
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L +A +E ++ +G D +Y M+ ++G L L EM Q Y
Sbjct: 472 LDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNI 531
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ + N + A +++ +Q AG PD ++++ G ++A F M++
Sbjct: 532 LIALQAKARNYQTALKLYRDMQNAGFKPDKVTYSIVMEVLGYCGYLEEAEAVFFEMKQNN 591
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
P + L++ K + +A E+ + R G + +L + F R+ + +
Sbjct: 592 WVPDEPVYGLLIDLWGKAGNVEKAWEWYHAMLRAGLLPNVPTCNSLLSAFLRVHRLPDAY 651
Query: 401 HVLRE 405
++L+
Sbjct: 652 NLLQN 656
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 111/271 (40%), Gaps = 5/271 (1%)
Query: 141 VLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRG 200
+LKQL+ +H + L + F + YT ++ G+ + L M + G
Sbjct: 359 ILKQLQ--DHSVALSFFYWLKRQPGFWHDGHTYTTMVGILGRAREFGAINKLLEQMVKDG 416
Query: 201 FICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGE 260
+ VT ++ Y +A L A F +++ +G D+ +Y +++ + +AG LD
Sbjct: 417 CQPNVVTYNRLIHSYGRANYLGEALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAM 476
Query: 261 VLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAY 320
+ M + + Y ++ +GN A R+F + G P+ +LI
Sbjct: 477 SMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQ 536
Query: 321 QMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGK 380
A Q A +++M+ AG +P ++++ L A +++++ ++ +
Sbjct: 537 AKARNYQTALKLYRDMQNAGFKPDKVTYSIVMEVLGYCGYLEEAEAVFFEMKQNNWVPDE 596
Query: 381 EASCTLAAWFKRLGVVE---EVEHVLREYGL 408
L + + G VE E H + GL
Sbjct: 597 PVYGLLIDLWGKAGNVEKAWEWYHAMLRAGL 627
>gi|255661156|gb|ACU25747.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 426
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 106/218 (48%), Gaps = 4/218 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 213 KNIEQNVVTYNXMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDR 272
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ Y +M++AY RAG++ + LL E+ + + ++ +L
Sbjct: 273 AAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDIAIHILA 331
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + + F MR G P
Sbjct: 332 G---AGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFP 388
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKE 381
+AL+L+A K ++ ++A + ++++ G + E
Sbjct: 389 DSNVIALVLNAYGKLHEFDKANDVYMEMQEVGCVFSDE 426
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 101/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + M+ G + + + ++ MY + A
Sbjct: 75 FTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEAL 134
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 135 SIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 194
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + ++ Y + +KA Q M+ G+E
Sbjct: 195 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNXMMMIYGKTLEHEKANNLIQEMQNRGIE 251
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 252 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRL 311
Query: 403 LRE 405
L E
Sbjct: 312 LHE 314
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 100/237 (42%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 113 NTASYSTLLTMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 172
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y ++ Y
Sbjct: 173 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNXMMMIYGKT 232
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G++
Sbjct: 233 LEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLY 292
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE V R+
Sbjct: 293 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAG----AGRIEEATWVFRQ 345
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 74/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ A + L M++ D V + ++ + K + A F +K
Sbjct: 12 YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 71
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +M+ + +A + L+ EM V + Y LL Y N
Sbjct: 72 RSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFL 131
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A +F ++ D C ++I+ Y G +++A F MRK G+EP+
Sbjct: 132 EALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 32/172 (18%), Positives = 76/172 (44%), Gaps = 2/172 (1%)
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
D+ +Y +++ + + G+ D L++M+ V +Y L+ + A +F
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
++ +G TPD +IN + A ++A + MR AG+ P+ + +L+ +
Sbjct: 68 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVEN 127
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRE 410
+ AL ++ ++ + + +LG+ +E + + +G+R+
Sbjct: 128 KKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF--WGMRK 177
>gi|334184699|ref|NP_001189682.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330253975|gb|AEC09069.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 613
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 105/234 (44%), Gaps = 1/234 (0%)
Query: 173 YTKIIHGYGK-KMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEI 231
Y I G K K + A + MKR T +M+ +Y KA M+ + + E+
Sbjct: 253 YNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEM 312
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
+ + +Y ++V A+ R G+ ++ E + ++ + VY AL+ YS G
Sbjct: 313 RSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYP 372
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALI 351
GA +F +Q G PD ++++AY AG A F+ M++ G+ P+ K L+
Sbjct: 373 YGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLL 432
Query: 352 LSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
LSA K + + + ++ +G ++ + RLG ++E +L E
Sbjct: 433 LSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAE 486
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 90/226 (39%), Gaps = 6/226 (2%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
NI YT +++ + ++ + AE ++ G D ++ YS+AG A E F
Sbjct: 320 NICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIF 379
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G D+ SY MV AY RAG+ E + EM + + + LL YS
Sbjct: 380 SLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKA 439
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
+ + + + + G+ PD + ++N Y GQ K M
Sbjct: 440 RDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTY 499
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
++++ K L R E ++L+ F + W R+G
Sbjct: 500 NILINIYGKAGFLERIEELFVELKEKNFRP------DVVTWTSRIG 539
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 78/202 (38%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E + Y ++ YG+ +AE MKR G + +++ YSKA ++ E
Sbjct: 388 EPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEA 447
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
+E+ G D SM+ Y R G + E +L EM+ Y L+ Y
Sbjct: 448 IVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYG 507
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G E + +F ++ PD I AY K F+ M +G P
Sbjct: 508 KAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGG 567
Query: 347 CVALILSACEKENQLNRALEFL 368
++LSAC E Q+ + L
Sbjct: 568 TAKVLLSACSSEEQVEQVTSVL 589
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 91/225 (40%), Gaps = 39/225 (17%)
Query: 156 VAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
V E L + SF+ ++ + +I YG+K Q + AE+ + + ++ + T +++ Y
Sbjct: 163 VCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAY 222
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV---Y 272
AG+++R EV+L EM V
Sbjct: 223 -----------------------------------CMAGLIERAEVVLVEMQNHHVSPKT 247
Query: 273 VGSEVYKALLRGY-SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
+G VY A + G GN+E A VF+ ++ P L+IN Y A +S ++
Sbjct: 248 IGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWK 307
Query: 332 AFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+ MR +P+ +++A +E +A E L+ DG
Sbjct: 308 LYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGL 352
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 67/171 (39%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ + ++ Y K + E + M G D L M+ +Y + G E+
Sbjct: 425 TMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKIL 484
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++ D +Y ++ Y +AG L+R E L E+ + + + + YS
Sbjct: 485 AEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRK 544
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
VFE + +G PD +L++A Q ++ + + M K
Sbjct: 545 KLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKG 595
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 92/202 (45%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ E N+ Y +I+G ++ +++ L M +RG+ D+VT ++ Y K GN
Sbjct: 269 KGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQ 328
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A E+ G +Y S++ + +AG ++R L +M + + Y L+
Sbjct: 329 ALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVD 388
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G+S G A RV + + G +P LIN + +AG+ A ++M++ GL P
Sbjct: 389 GFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTP 448
Query: 344 SDKCVALILSACEKENQLNRAL 365
+ +LS + ++ AL
Sbjct: 449 DVVSYSTVLSGFCRSYDVDEAL 470
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N R YT ++ G+ +K + A L M GF VT ++ + AG + A
Sbjct: 379 NERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVL 438
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++K G D SY +++ + R+ +D + R+M A+ + + Y +L++G+
Sbjct: 439 EDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQ 498
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
++ A +F+ + G+ PD LINAY M G QKA M + G+ P
Sbjct: 499 RRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTY 558
Query: 349 ALILSACEKENQLNRALEFLIDL 371
+++++ K+ + A L+ L
Sbjct: 559 SVLINGLNKQARTREAKRLLLKL 581
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 98/237 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I GY K +I + L +M +G + ++ V++ + G +K
Sbjct: 239 NVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVL 298
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E+ G LD+ +Y +++ Y + G + V+ EM + Y +L+
Sbjct: 299 TEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKA 358
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
GN A + ++ G+ P+ R L++ + G +AY + M G PS
Sbjct: 359 GNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTY 418
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+++ ++ A+ L D++ G + T+ + F R V+E V R+
Sbjct: 419 NALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRK 475
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 1/186 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I GY K+ A M R G +T T ++ KAGN+ A E ++++
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMR 372
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ G ++R+Y ++V + + G ++ +L+EM Y AL+ G+ + G
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMV 432
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV-ALI 351
A V E ++ G+TPD + +++ + + +A + M G++P +LI
Sbjct: 433 DAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLI 492
Query: 352 LSACEK 357
CE+
Sbjct: 493 QGFCEQ 498
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 92/224 (41%), Gaps = 2/224 (0%)
Query: 183 KMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRS 242
K I AEN M + + T +++ + AGNL +A F+ ++ G + +
Sbjct: 183 KRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVT 242
Query: 243 YGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQ 302
Y +++ Y + +D G LLR M + + Y ++ G G + V +
Sbjct: 243 YNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMN 302
Query: 303 FAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS-DKCVALILSACEKENQL 361
G + D LI Y G +A M + GL PS +LI S C+ N +
Sbjct: 303 KRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGN-M 361
Query: 362 NRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
NRA EFL + G + TL F + G + E VL+E
Sbjct: 362 NRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKE 405
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 89/216 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L+ N+ Y +I G+ + A M+++G + + VT ++ Y K
Sbjct: 196 MLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRK 255
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ E + L G + SY ++ R G + +L EM+ + + Y
Sbjct: 256 IDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNT 315
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L++GY GN A + + G++P LI++ AG +A MR G
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRG 375
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
L P+++ ++ ++ +N A L ++ +GF
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGF 411
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 95/222 (42%)
Query: 156 VAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
V +L ++ YT +IH K + A L M+ RG ++ T T +V +
Sbjct: 331 VMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGF 390
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
S+ G + A +E+ G +Y +++ + AG + +L +M + +
Sbjct: 391 SQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDV 450
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
Y +L G+ + + + A RV + GI PD + LI + ++++A F
Sbjct: 451 VSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDE 510
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
M + GL P + +++A E L +A++ ++ G +
Sbjct: 511 MLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVL 552
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 103/248 (41%), Gaps = 15/248 (6%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I G+ ++ + + A + M R G D+ T T ++ Y G+L+ A + E+
Sbjct: 488 YSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMV 547
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK------------- 279
G D +Y ++ + + LL ++ +E Y
Sbjct: 548 EKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKS 607
Query: 280 --ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
+L++G+ M G A +VFE++ PD ++I+ + G +KAY+ ++ M
Sbjct: 608 VVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMV 667
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
K+G V ++ KE ++N + ++ R + E + L R G ++
Sbjct: 668 KSGFLLHTVTVIALVKTLHKEGKVNELNSVIANVLRSCELSEAEQAKVLVEINHREGNMD 727
Query: 398 EVEHVLRE 405
V VL E
Sbjct: 728 VVLDVLAE 735
>gi|15221377|ref|NP_177613.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207514|sp|Q9SSF9.1|PP123_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74750
gi|5882748|gb|AAD55301.1|AC008263_32 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332197508|gb|AEE35629.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 855
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 96/204 (47%), Gaps = 5/204 (2%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
+Y ++ E L ++F Y+ II+ GK + A M +G + VT +M
Sbjct: 451 MYQRMQEAGLSPDTFT-----YSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIM 505
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ +++KA N + A + + +++ G DK +Y ++ G L+ E + EM +
Sbjct: 506 IALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNW 565
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
VY L+ + GN + A + ++A+ AG+ P+ C L++ + + +AY
Sbjct: 566 VPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYN 625
Query: 332 AFQNMRKAGLEPSDKCVALILSAC 355
Q+M GL PS + L+LS C
Sbjct: 626 LLQSMLALGLHPSLQTYTLLLSCC 649
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 110/244 (45%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + + N Y ++IH YG+ ++ A N M+ G D+VT ++ +++KAG
Sbjct: 385 MVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGF 444
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L +A + ++ ++ G D +Y ++ +AG L L EM Q +
Sbjct: 445 LDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNI 504
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ ++ N E A +++ +Q AG PD ++++ G ++A F M++
Sbjct: 505 MIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKN 564
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
P + L++ K +++A ++ + + G +L + F R+ + E
Sbjct: 565 WVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAY 624
Query: 401 HVLR 404
++L+
Sbjct: 625 NLLQ 628
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/236 (19%), Positives = 99/236 (41%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+ F+ + YT ++ G+ Q L M R G + VT ++ Y +A LK
Sbjct: 352 QPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLK 411
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A F +++ G D+ +Y +++ + +AG LD + + M + + Y ++
Sbjct: 412 EAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVII 471
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G+ A R+F + G TP+ ++I + A + A +++M+ AG +
Sbjct: 472 NCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQ 531
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
P ++++ L A +++R ++ + L + + G V++
Sbjct: 532 PDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDK 587
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 96/216 (44%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+ E E ++ Y +++GY ++ A M +G D + ++++ Y KA
Sbjct: 210 TMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAK 269
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ A++ F E+ G + SY +++ + G L + L + M Y
Sbjct: 270 RIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYA 329
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
LL G+ G A R+F A+Q + P+ M +L+NA +G + A F +
Sbjct: 330 ILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVI 389
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
GL+P+ + I++ KE L+ ALE ++E DG
Sbjct: 390 GLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDG 425
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 106/240 (44%), Gaps = 10/240 (4%)
Query: 138 WLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMK 197
W V++ KL + ++ + + ++ Y+ +I+GY K +I A+ M
Sbjct: 233 WTEVVEARKLFD----------VMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMI 282
Query: 198 RRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLD 257
+G + V+ ++ + G L+ A++ F+ + G + +Y ++ + + G L
Sbjct: 283 HQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLG 342
Query: 258 RGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
+ L R M + + +Y L+ +GN + A+ +F + G+ P+ ++ +I
Sbjct: 343 KAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTII 402
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
N G +A AF+NM G P + +I+ + +RA+ + ++ GF+
Sbjct: 403 NGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFI 462
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 99/237 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ + ++ + K+ ++ AE L M G D VT ++ YS + A + F
Sbjct: 184 NVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLF 243
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ + G D SY ++ Y +A +D + L EM Q + Y L+ G
Sbjct: 244 DVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQL 303
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G AQ +F+ + G P+ A+L++ + G KA+ F+ M+ L+P+
Sbjct: 304 GRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMY 363
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++++A K L A E +L G + T+ + G+++E R
Sbjct: 364 NILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRN 420
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 100/252 (39%), Gaps = 2/252 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E + N+ Y+ +IH K ++ A + MK + T T ++ K
Sbjct: 108 EAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWK 167
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A E+ L + ++ +V + + G + E +L+ M V Y +L+
Sbjct: 168 EASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLM 227
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
GYSM A+++F+ + G PD ++LIN Y A + +A F M G
Sbjct: 228 YGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGST 287
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P++ ++ + +L A + ++ +G + L F + G + + +
Sbjct: 288 PNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRL 347
Query: 403 LREYGLRETYSK 414
R ++ TY K
Sbjct: 348 FR--AMQSTYLK 357
Score = 41.2 bits (95), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 47/251 (18%), Positives = 93/251 (37%), Gaps = 3/251 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT II+G K + A M+ G + VT + ++ K + A + F +K
Sbjct: 83 YTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMK 142
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+Y S++ LL EM + + + L+ + G
Sbjct: 143 AKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVL 202
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ V + + G+ PD L+ Y M + +A F M G +P ++++
Sbjct: 203 AAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILI 262
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRETY 412
+ K +++ A + ++ G + TL +LG + E + + + T
Sbjct: 263 NGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKN---MHTN 319
Query: 413 SKIPGSRSIAL 423
+P + A+
Sbjct: 320 GNLPNLYTYAI 330
>gi|428186270|gb|EKX55120.1| hypothetical protein GUITHDRAFT_53115, partial [Guillardia theta
CCMP2712]
Length = 363
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ E N + +I K Q+ A M+ RG + + T T + K G+ +
Sbjct: 92 QGIEPNEFTFAALITACEKGGQVSKAFEVFERMQARGIVGNVYTFTAAISSCEKLGDWQR 151
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A + EE+ G + ++Y + + A +A LL M +++ VY A++
Sbjct: 152 ALKLLEEMIAKGIQPNLQAYSAAISACEKAAEARPALGLLERMTNEKIKPDIIVYSAVMA 211
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G E A R+F+ ++ G+TPD + LI AYQ AG+ +A FQ M KAG+ P
Sbjct: 212 ACGKAGLWEPAARIFQKMKREGLTPDVVAYSTLIQAYQRAGEWSRALEVFQLMEKAGVRP 271
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERD 374
+ ++AC K + R+L L ++ D
Sbjct: 272 NVIAYTEAIAACAKAGEWRRSLGLLERMKAD 302
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 101/240 (42%), Gaps = 7/240 (2%)
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA 224
S + ++ I K + Q A N M+ +G ++ T ++ K G + A
Sbjct: 58 SLRPDTVTFSTAISACAKGGEWQRAMNMYHEMEAQGIEPNEFTFAALITACEKGGQVSKA 117
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
E FE ++ G + ++ + + + + G R LL EM A+ + + Y A +
Sbjct: 118 FEVFERMQARGIVGNVYTFTAAISSCEKLGDWQRALKLLEEMIAKGIQPNLQAYSAAISA 177
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
+ A + E + I PD + + ++ A AG + A FQ M++ GL P
Sbjct: 178 CEKAAEARPALGLLERMTNEKIKPDIIVYSAVMAACGKAGLWEPAARIFQKMKREGLTPD 237
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDGF------MVGKEASCTLAA-WFKRLGVVE 397
+ ++ A ++ + +RALE +E+ G A+C A W + LG++E
Sbjct: 238 VVAYSTLIQAYQRAGEWSRALEVFQLMEKAGVRPNVIAYTEAIAACAKAGEWRRSLGLLE 297
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 85/211 (40%), Gaps = 4/211 (1%)
Query: 159 LALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
L LLEE + N++ Y+ I K + + A L M D + + ++
Sbjct: 153 LKLLEEMIAKGIQPNLQAYSAAISACEKAAEARPALGLLERMTNEKIKPDIIVYSAVMAA 212
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
KAG + A F+++K G D +Y +++ AY RAG R + + M+ V
Sbjct: 213 CGKAGLWEPAARIFQKMKREGLTPDVVAYSTLIQAYQRAGEWSRALEVFQLMEKAGVRPN 272
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
Y + + G + + E ++ + PDA +I+A GQ T Q
Sbjct: 273 VIAYTEAIAACAKAGEWRRSLGLLERMKADKLRPDAVAYNFVISALSRGGQWDAGLTLLQ 332
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRAL 365
+ + +P+ ++ AC Q +AL
Sbjct: 333 MLEEDEAQPNISTYCTVIKACGDNGQWEKAL 363
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/209 (19%), Positives = 91/209 (43%), Gaps = 3/209 (1%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D VT + + +K G + A + E++ G ++ ++ +++ A + G + + +
Sbjct: 62 DTVTFSTAISACAKGGEWQRAMNMYHEMEAQGIEPNEFTFAALITACEKGGQVSKAFEVF 121
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
M A+ + + A + G+ + A ++ E + GI P+ + + I+A + A
Sbjct: 122 ERMQARGIVGNVYTFTAAISSCEKLGDWQRALKLLEEMIAKGIQPNLQAYSAAISACEKA 181
Query: 324 GQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEAS 383
+++ A + M ++P + +++AC K A ++R+G A
Sbjct: 182 AEARPALGLLERMTNEKIKPDIIVYSAVMAACGKAGLWEPAARIFQKMKREGLTPDVVAY 241
Query: 384 CTLAAWFKRLGVVE---EVEHVLREYGLR 409
TL ++R G EV ++ + G+R
Sbjct: 242 STLIQAYQRAGEWSRALEVFQLMEKAGVR 270
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 64/139 (46%), Gaps = 18/139 (12%)
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFA----------GITPDARMCALLINAYQMAGQSQ 327
Y A + + NG A +F+++ F+ + PD + I+A G+ Q
Sbjct: 22 YNAAMSALTRNGRWREALSMFDSV-FSQTERNKVAARSLRPDTVTFSTAISACAKGGEWQ 80
Query: 328 KAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM------VGKE 381
+A + M G+EP++ A +++ACEK Q+++A E ++ G +
Sbjct: 81 RAMNMYHEMEAQGIEPNEFTFAALITACEKGGQVSKAFEVFERMQARGIVGNVYTFTAAI 140
Query: 382 ASC-TLAAWFKRLGVVEEV 399
+SC L W + L ++EE+
Sbjct: 141 SSCEKLGDWQRALKLLEEM 159
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 94/219 (42%), Gaps = 2/219 (0%)
Query: 187 QNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSM 246
Q A MK GF D+VT ++ +Y K+ K A + E++L G +Y S+
Sbjct: 296 QEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSL 355
Query: 247 VMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGI 306
+ AY R GMLD L +M + Y LL G+ G E A +FE ++ AG
Sbjct: 356 ISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGC 415
Query: 307 TPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALE 366
P+ I Y G+ F + GL P D L A +N ++ +
Sbjct: 416 KPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSP-DIVTWNTLLAVFGQNGMDSEVS 474
Query: 367 FLI-DLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
+ +++R GF+ +E TL + + R G E+ V R
Sbjct: 475 GVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYR 513
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 79/183 (43%)
Query: 189 AENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVM 248
AE +K RGF D TL MV +Y + + A E + +K G +Y S++
Sbjct: 613 AERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMY 672
Query: 249 AYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITP 308
+ R+ + E +LRE+ A+ + Y ++ Y N A R+F ++ +GI P
Sbjct: 673 MHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVP 732
Query: 309 DARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFL 368
D I +Y ++A + M K G P+ I+ K N+ + A F+
Sbjct: 733 DVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFV 792
Query: 369 IDL 371
DL
Sbjct: 793 EDL 795
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 100/244 (40%), Gaps = 1/244 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLL-AMKRRGFICDQVTLTVMVVMYSKAGNL 221
EE + + Y I++ +GK N +L+ MK G D T ++ +
Sbjct: 236 EEGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLH 295
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
+ A + FEE+K G DK +Y +++ Y ++ +L EM+ Y +L
Sbjct: 296 QEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSL 355
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+ Y+ +G + A + + G PD L++ ++ AG+ + A F+ MR AG
Sbjct: 356 ISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGC 415
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEH 401
+P+ + + ++ ++ G TL A F + G+ EV
Sbjct: 416 KPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSG 475
Query: 402 VLRE 405
V +E
Sbjct: 476 VFKE 479
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 97/238 (40%), Gaps = 2/238 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I + ++ +G+ MKR GF+ ++ T ++ YS+ G+ + A +
Sbjct: 453 DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVY 512
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ G D +Y +++ A R GM ++ E +L EM+ Y +LL Y+ N
Sbjct: 513 RRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYA-N 571
Query: 289 GNSEGAQRVFEAIQFAG-ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G G ++G I P A + L+ +A AF +++ G P
Sbjct: 572 GKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITT 631
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ ++S + + +A E L ++ GF +L R + E +LRE
Sbjct: 632 LNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILRE 689
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 83/194 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+ E+ + ++ YT ++ G+ + ++++A N M+ G + T + MY G
Sbjct: 375 MAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGK 434
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ F+EI + G D ++ +++ + + GM + +EM E +
Sbjct: 435 FVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNT 494
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ YS G+ E A V+ + AG+TPD ++ A G +++ M
Sbjct: 495 LISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGR 554
Query: 341 LEPSDKCVALILSA 354
+P++ +L A
Sbjct: 555 CKPNELTYCSLLHA 568
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 73/172 (42%), Gaps = 2/172 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQ-VTLTVMVVMYSKAGNLKMAEETFEEI 231
Y ++H Y +I ++L G I + V L +V++ SK L AE F E+
Sbjct: 562 YCSLLHAYANGKEI-GLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSEL 620
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
K G D + SMV Y R M+ + +L M + Y +L+ +S + +
Sbjct: 621 KERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHSRSADF 680
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
++ + I GI PD +I AY + + A F MR +G+ P
Sbjct: 681 GKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVP 732
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/243 (18%), Positives = 96/243 (39%), Gaps = 3/243 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
NI + I YG + + + + G D VT ++ ++ + G F
Sbjct: 418 NICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVF 477
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+K G ++ ++ +++ AY R G ++ + R M V Y +L +
Sbjct: 478 KEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARG 537
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G E +++V ++ P+ L++AY + ++ + + +EP +
Sbjct: 538 GMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLL 597
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKR---LGVVEEVEHVLRE 405
++ C K + L A +L+ GF ++ + + R +G EV ++E
Sbjct: 598 KTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKE 657
Query: 406 YGL 408
G
Sbjct: 658 RGF 660
>gi|110738150|dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
Length = 642
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 98/243 (40%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E E + Y +++G M + +AE M+ D VT M+ Y KAG +
Sbjct: 197 ENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQ 256
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A E +++ G DK +Y +M+ A L +EMD + + V + ++
Sbjct: 257 KAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVI 316
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G G VFE + G P+ + +LI+ Y +G + A M G +
Sbjct: 317 GGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFK 376
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P +++++ K ++ AL++ DG + +L + G V+E E +
Sbjct: 377 PDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERL 436
Query: 403 LRE 405
E
Sbjct: 437 FEE 439
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 102/225 (45%), Gaps = 3/225 (1%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + + N+ YT +I GY K +++A L M GF D VT +V+V K G
Sbjct: 335 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 394
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ A + F + G ++ Y S++ +AG +D E L EM + S Y A
Sbjct: 395 VEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNA 454
Query: 281 LLRGYSMNGNSEGAQRVFEAI-QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ ++ + + A +F+ + + G +L++ ++++A + M
Sbjct: 455 LIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDK 514
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASC 384
G+ P+ C + + ++ RA + L +L G ++ +A+C
Sbjct: 515 GITPTAACFRALSTGLCLSGKVARACKILDELAPMGVIL--DAAC 557
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 85/207 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I Y +I GY K Q Q A L M+ RG D++T M+ + +
Sbjct: 238 DIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALY 297
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+ G + ++ ++ + G L+ G + M + +Y L+ GY+ +
Sbjct: 298 QEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKS 357
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G+ E A R+ + G PD ++++N G+ ++A F R GL +
Sbjct: 358 GSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFY 417
Query: 349 ALILSACEKENQLNRALEFLIDLERDG 375
+ ++ K +++ A ++ G
Sbjct: 418 SSLIDGLGKAGRVDEAERLFEEMSEKG 444
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 65/153 (42%)
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
EIK P+ + +++ ++ + GM++ + R+M + Y L+ G
Sbjct: 159 EIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAM 218
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
+ A+RVFE ++ I PD +I Y AGQ+QKA ++M G E
Sbjct: 219 FVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYM 278
Query: 350 LILSACEKENQLNRALEFLIDLERDGFMVGKEA 382
++ AC ++ + +++ G V A
Sbjct: 279 TMIQACYADSDFGSCVALYQEMDEKGIQVPPHA 311
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 102/247 (41%), Gaps = 43/247 (17%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++E F+ ++ Y+ +++G K +++ A + + G + + + ++ KAG
Sbjct: 370 MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGR 429
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE-----VYVGS 275
+ AE FEE+ G D Y +++ A+ + +D L + M+ +E VY
Sbjct: 430 VDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYT-- 487
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDA-----------------RMCALL-- 316
Y LL G +E A ++++ + GITP A R C +L
Sbjct: 488 --YTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDE 545
Query: 317 ---------------INAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQL 361
IN AG+ ++A + + G E + ++++A K +
Sbjct: 546 LAPMGVILDAACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKA 605
Query: 362 NRALEFL 368
+ A++ +
Sbjct: 606 DLAMKLM 612
Score = 38.1 bits (87), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 38/202 (18%), Positives = 75/202 (37%), Gaps = 3/202 (1%)
Query: 206 VTLTVMVVMYSKAGNLKMAEE---TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVL 262
+T++ + G L M EE + ++K G +Y ++ V A +D E +
Sbjct: 167 MTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERV 226
Query: 263 LREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQM 322
M++ + Y +++GY G ++ A ++ G D +I A
Sbjct: 227 FEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYA 286
Query: 323 AGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEA 382
+Q M + G++ +L++ KE +LN ++ R G
Sbjct: 287 DSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAI 346
Query: 383 SCTLAAWFKRLGVVEEVEHVLR 404
L + + G VE+ +L
Sbjct: 347 YTVLIDGYAKSGSVEDAIRLLH 368
>gi|15226907|ref|NP_181058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100538|sp|O82178.1|PP186_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g35130
gi|3668091|gb|AAC61823.1| hypothetical protein [Arabidopsis thaliana]
gi|330253974|gb|AEC09068.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 591
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 105/234 (44%), Gaps = 1/234 (0%)
Query: 173 YTKIIHGYGK-KMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEI 231
Y I G K K + A + MKR T +M+ +Y KA M+ + + E+
Sbjct: 231 YNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEM 290
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
+ + +Y ++V A+ R G+ ++ E + ++ + VY AL+ YS G
Sbjct: 291 RSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYP 350
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALI 351
GA +F +Q G PD ++++AY AG A F+ M++ G+ P+ K L+
Sbjct: 351 YGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLL 410
Query: 352 LSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
LSA K + + + ++ +G ++ + RLG ++E +L E
Sbjct: 411 LSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAE 464
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 90/226 (39%), Gaps = 6/226 (2%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
NI YT +++ + ++ + AE ++ G D ++ YS+AG A E F
Sbjct: 298 NICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIF 357
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G D+ SY MV AY RAG+ E + EM + + + LL YS
Sbjct: 358 SLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKA 417
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
+ + + + + G+ PD + ++N Y GQ K M
Sbjct: 418 RDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTY 477
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
++++ K L R E ++L+ F + W R+G
Sbjct: 478 NILINIYGKAGFLERIEELFVELKEKNFRP------DVVTWTSRIG 517
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 78/202 (38%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E + Y ++ YG+ +AE MKR G + +++ YSKA ++ E
Sbjct: 366 EPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEA 425
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
+E+ G D SM+ Y R G + E +L EM+ Y L+ Y
Sbjct: 426 IVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYG 485
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G E + +F ++ PD I AY K F+ M +G P
Sbjct: 486 KAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGG 545
Query: 347 CVALILSACEKENQLNRALEFL 368
++LSAC E Q+ + L
Sbjct: 546 TAKVLLSACSSEEQVEQVTSVL 567
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 107/269 (39%), Gaps = 48/269 (17%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEH-PLYLQVAELALLEESFEANIR 171
V+ G L A+W D + V QL+L + + V E L + SF+ ++
Sbjct: 105 VADVLGALPSTHASW--------DDLINVSVQLRLNKKWDSIILVCEWILRKSSFQPDVI 156
Query: 172 DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEI 231
+ +I YG+K Q + AE+ + + ++ + T +++ Y
Sbjct: 157 CFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAY---------------- 200
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV---YVGSEVYKALLRGY-SM 287
AG+++R EV+L EM V +G VY A + G
Sbjct: 201 -------------------CMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKR 241
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
GN+E A VF+ ++ P L+IN Y A +S ++ + MR +P+
Sbjct: 242 KGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICT 301
Query: 348 VALILSACEKENQLNRALEFLIDLERDGF 376
+++A +E +A E L+ DG
Sbjct: 302 YTALVNAFAREGLCEKAEEIFEQLQEDGL 330
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 67/171 (39%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ + ++ Y K + E + M G D L M+ +Y + G E+
Sbjct: 403 TMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKIL 462
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++ D +Y ++ Y +AG L+R E L E+ + + + + YS
Sbjct: 463 AEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRK 522
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
VFE + +G PD +L++A Q ++ + + M K
Sbjct: 523 KLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKG 573
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 101/231 (43%), Gaps = 1/231 (0%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKL 233
T +I+ Y KK ++ A + +M +G + D T TV++ K + AEE F E++
Sbjct: 561 TGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRG 620
Query: 234 LGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEG 293
G D SYG ++ + + G + + + EM + + +Y LL G+ +G E
Sbjct: 621 KGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEK 680
Query: 294 AQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILS 353
A+ + + + G+ P+A +I+ Y +G +A+ F M+ GL P ++
Sbjct: 681 AKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVD 740
Query: 354 ACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
C + N + RA+ + + G L W + G E VL
Sbjct: 741 GCCRLNDVERAIT-IFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLN 790
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 92/180 (51%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+++++ + + YT +++G K ++ +AE M+ +G D + V++ +SK G
Sbjct: 582 SMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLG 641
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
N++ A F+E+ G + Y ++ + R+G +++ + LL EM + ++ + Y
Sbjct: 642 NMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYC 701
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
++ GY +G+ A R+F+ ++ G+ PD+ + L++ ++A T F +K
Sbjct: 702 TIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKG 761
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 112/276 (40%), Gaps = 16/276 (5%)
Query: 134 RRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTL 193
R D + VLK++K E+ +I Y +I G K ++ A + L
Sbjct: 467 RFGDAMRVLKEMK----------------EQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 194 LAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRA 253
+ M G + T + Y +A A++ +E++ G +K ++ Y +
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKK 570
Query: 254 GMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
G + R M Q + ++ Y L+ G N + A+ +F ++ GI PD
Sbjct: 571 GKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSY 630
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
+LIN + G QKA + F M + GL P+ ++L + ++ +A E L ++
Sbjct: 631 GVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV 690
Query: 374 DGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLR 409
G CT+ + + G + E + E L+
Sbjct: 691 KGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLK 726
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 121/304 (39%), Gaps = 46/304 (15%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++EE N+ Y ++ G+ + +I+ A+ L M +G + VT ++ Y K+G+
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG--------------------- 259
L A F+E+KL G D Y ++V R ++R
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNAL 772
Query: 260 --------------EVLLREMDAQEVYVGSE---VYKALLRGYSMNGNSEGAQRVFEAIQ 302
EVL R MD G Y ++ GN E A+ +F +Q
Sbjct: 773 INWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQ 832
Query: 303 FAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLN 362
A + P L+N Y G+ + + F AG+EP ++I++A KE
Sbjct: 833 NANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTT 892
Query: 363 RALE-----FLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRETYSKIPG 417
+AL F + DG + L + F ++G +E E V+ E +R Y IP
Sbjct: 893 KALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVM-ENMVRLQY--IPD 949
Query: 418 SRSI 421
S ++
Sbjct: 950 SATV 953
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 100/237 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E + N Y I GY + + +A+ + M+ G + ++V T ++ Y K G
Sbjct: 513 MVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGK 572
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + + G D ++Y ++ + +D E + REM + + Y
Sbjct: 573 VIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGV 632
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G+S GN + A +F+ + G+TP+ + +L+ + +G+ +KA M G
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
L P+ I+ K L A +++ G + TL RL VE
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVE 749
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 88/204 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I G K A+ + M G + + SK G ++ A+ F+ +
Sbjct: 315 YSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMI 374
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G ++Y S++ Y R + +G LL EM + + + Y +++G +G+ +
Sbjct: 375 ASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLD 434
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
GA + + + +G P+ + LI + + A + M++ G+ P C ++
Sbjct: 435 GAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLI 494
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
K +++ A FL+++ +G
Sbjct: 495 IGLSKAKRMDEARSFLVEMVENGL 518
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 96/233 (41%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ G + A N + M G + V T ++ + + A +E+K
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK 479
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D Y S+++ +A +D L EM + + Y A + GY
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFA 539
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + ++ G+ P+ +C LIN Y G+ +A +A+++M G+ K +++
Sbjct: 540 SADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLM 599
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ K ++++ A E ++ G + L F +LG +++ + E
Sbjct: 600 NGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 64/144 (44%)
Query: 195 AMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG 254
+M +G + + T V++ K L+ A+ E+ LG LD +Y ++ ++
Sbjct: 267 SMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGR 326
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
D + L+ EM + + + +Y + S G E A+ +F+ + +G+ P A+ A
Sbjct: 327 NADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYA 386
Query: 315 LLINAYQMAGQSQKAYTAFQNMRK 338
LI Y ++ Y M+K
Sbjct: 387 SLIEGYCREKNVRQGYELLVEMKK 410
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 57/130 (43%)
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
Y + N++ E E+K + +YG++V +G LD +++EM A
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+Y L++ + N A RV + ++ GI PD LI A + +A +
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511
Query: 335 NMRKAGLEPS 344
M + GL+P+
Sbjct: 512 EMVENGLKPN 521
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 71/167 (42%), Gaps = 9/167 (5%)
Query: 161 LLEESFE----ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS 216
L++ SF+ N Y +I K+ ++ A+ M+ + +T T ++ Y
Sbjct: 792 LMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYD 851
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY---- 272
K G F+E G D Y ++ A+++ GM + VL+ +M A+
Sbjct: 852 KMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGC 911
Query: 273 -VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLIN 318
+ +ALL G++ G E A++V E + PD+ LIN
Sbjct: 912 KLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELIN 958
>gi|224135699|ref|XP_002322139.1| predicted protein [Populus trichocarpa]
gi|222869135|gb|EEF06266.1| predicted protein [Populus trichocarpa]
Length = 866
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 98/211 (46%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+ EE+ E N+ Y +I GK +A+ LL M +G I T ++ Y +A
Sbjct: 415 MAEENVEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKGMIPSSKAYTGVIEAYGQAAM 474
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A T + +G +Y +++ + R G+ E +L +M V + +
Sbjct: 475 YEEALVTLNTMNEMGSKPTIETYNTLIYMFARGGLYKETEAILLKMGDFGVARERDSFNG 534
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G+ G E A + + ++ + + PD R +++ Y +AG ++ FQ ++ +G
Sbjct: 535 VIEGFRQGGQFEEAIKAYVEMEKSRLVPDERTLEAVLSVYCIAGLVDESVEQFQEIKASG 594
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDL 371
+ P+ C ++L+ K ++ N A E L ++
Sbjct: 595 ILPNVMCYCMMLAVYAKSDRWNEAYELLDEM 625
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 102/262 (38%), Gaps = 13/262 (4%)
Query: 137 DWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAM 196
DW +L M H E + +I Y ++ + AE M
Sbjct: 229 DWEGLLGLFAEMRH-------------EGIQPDIVTYNTLLCACSNRGLGDEAEMVFRTM 275
Query: 197 KRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGML 256
G + D T T +V + K L E +E+ G + SY ++ AY R G +
Sbjct: 276 NEGGVVPDITTYTYLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIGNI 335
Query: 257 DRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALL 316
+ + R M +E Y LL Y +G + + +F ++ + PDA L
Sbjct: 336 EDATGVFRLMQEAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTL 395
Query: 317 INAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
I+ + G ++ T F +M + +EP+ + ++ AC K + A + L+ + G
Sbjct: 396 IDVFGEGGYFKEVVTLFHDMAEENVEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKGM 455
Query: 377 MVGKEASCTLAAWFKRLGVVEE 398
+ +A + + + + EE
Sbjct: 456 IPSSKAYTGVIEAYGQAAMYEE 477
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 109/258 (42%), Gaps = 10/258 (3%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFIC--DQVTLTVMVVMYSKAGNLKMAEE 226
++ D+ + + ++ Q + M+R+ C ++ T+M+ + + G L+ +
Sbjct: 106 SLNDFALVFKEFAQRGDWQRSLRLFKHMQRQ-IWCKPNEHIYTIMISLLGREGLLEKCSD 164
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
FEE+ G SY +++ +Y R G + LL M + V Y ++ +
Sbjct: 165 IFEEMGAHGVSRSVFSYTALINSYGRNGKYEVSLELLERMKKERVSPSILTYNTVINSCA 224
Query: 287 MNG-NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
G + EG +F ++ GI PD L+ A G +A F+ M + G+ P
Sbjct: 225 RGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMNEGGVVPDI 284
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR- 404
++ K N+L++ E L ++ G + + L + R+G +E+ V R
Sbjct: 285 TTYTYLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIEDATGVFRL 344
Query: 405 --EYGL---RETYSKIPG 417
E G ETYS + G
Sbjct: 345 MQEAGCVPNAETYSILLG 362
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 93/239 (38%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I YT ++ +GK ++ L M G + + + V++ Y++ GN++ A F
Sbjct: 283 DITTYTYLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIEDATGVF 342
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ G + +Y ++ Y + G D L EM + Y L+ +
Sbjct: 343 RLMQEAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVFGEG 402
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + +F + + P+ LI A G A +M + G+ PS K
Sbjct: 403 GYFKEVVTLFHDMAEENVEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKGMIPSSKAY 462
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYG 407
++ A + AL L + G E TL F R G+ +E E +L + G
Sbjct: 463 TGVIEAYGQAAMYEEALVTLNTMNEMGSKPTIETYNTLIYMFARGGLYKETEAILLKMG 521
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/328 (20%), Positives = 128/328 (39%), Gaps = 33/328 (10%)
Query: 96 PRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLM------- 148
PR RC K + +L+D + F +R DW L+ K M
Sbjct: 90 PRGSIARCLDVFKNKL-------SLNDFALVFKEF--AQRGDWQRSLRLFKHMQRQIWCK 140
Query: 149 --EHPLYLQVAELA---LLE---ESFEA--------NIRDYTKIIHGYGKKMQIQNAENT 192
EH + ++ L LLE + FE ++ YT +I+ YG+ + + +
Sbjct: 141 PNEHIYTIMISLLGREGLLEKCSDIFEEMGAHGVSRSVFSYTALINSYGRNGKYEVSLEL 200
Query: 193 LLAMKRRGFICDQVTLTVMVVMYSKAG-NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYV 251
L MK+ +T ++ ++ G + + F E++ G D +Y +++ A
Sbjct: 201 LERMKKERVSPSILTYNTVINSCARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLCACS 260
Query: 252 RAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDAR 311
G+ D E++ R M+ V Y L+ + + + + + G P+
Sbjct: 261 NRGLGDEAEMVFRTMNEGGVVPDITTYTYLVDTFGKLNRLDKVSELLKEMASTGNVPEIS 320
Query: 312 MCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDL 371
+L+ AY G + A F+ M++AG P+ + +++L K + + E +++
Sbjct: 321 SYNVLLEAYARIGNIEDATGVFRLMQEAGCVPNAETYSILLGLYGKHGRYDEVRELFLEM 380
Query: 372 ERDGFMVGKEASCTLAAWFKRLGVVEEV 399
+ TL F G +EV
Sbjct: 381 KVSNTEPDAATYNTLIDVFGEGGYFKEV 408
>gi|302806226|ref|XP_002984863.1| hypothetical protein SELMODRAFT_121207 [Selaginella moellendorffii]
gi|300147449|gb|EFJ14113.1| hypothetical protein SELMODRAFT_121207 [Selaginella moellendorffii]
Length = 564
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 90/193 (46%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
F + Y+ IIH GK ++ A M RG+ VT +++ +++KAG
Sbjct: 165 HAGFRPDTFTYSIIIHCLGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGKFD 224
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
MA + + +++ +G D+ +YG ++ G ++ E + EM+ + ++ ++
Sbjct: 225 MALKLYSDLQEVGYAPDRVTYGIIMEVLGNCGHIEDAEQVFEEMERAGWVADNPIFGLMV 284
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
+ GN+E A + F + +G+ P+ C L++AY + A M K GL
Sbjct: 285 DMWGKTGNAEKAAQWFNRMLDSGLQPNVPACNSLLSAYLRSSFYDAAGGVLGGMAKWGLY 344
Query: 343 PSDKCVALILSAC 355
P+ + +LS+C
Sbjct: 345 PTLQTYTSLLSSC 357
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 96/229 (41%), Gaps = 35/229 (15%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ E E N+ Y ++IH YG+ + ++ M+ G D+VT ++ + +KAG
Sbjct: 93 MIREGCEPNVVTYNRLIHCYGRANDLDSSLKLFNVMQMVGCEPDRVTYCTLIDLQAKAGF 152
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM-------------- 266
A + + +++ G D +Y ++ +AG L+ L EM
Sbjct: 153 HDAAMDLYRQMQHAGFRPDTFTYSIIIHCLGKAGKLNAAYKLFCEMTDRGYAPSLVTYNI 212
Query: 267 -------------------DAQEVYVGSE--VYKALLRGYSMNGNSEGAQRVFEAIQFAG 305
D QEV + Y ++ G+ E A++VFE ++ AG
Sbjct: 213 IIDLHAKAGKFDMALKLYSDLQEVGYAPDRVTYGIIMEVLGNCGHIEDAEQVFEEMERAG 272
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSA 354
D + L+++ + G ++KA F M +GL+P+ +LSA
Sbjct: 273 WVADNPIFGLMVDMWGKTGNAEKAAQWFNRMLDSGLQPNVPACNSLLSA 321
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 92/243 (37%), Gaps = 35/243 (14%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+ F+ ++ YT I+ G+ N L M R G + VT ++ Y +A +L
Sbjct: 60 QAGFKHDVHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDLD 119
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
+ + F ++++G D+ +Y +++ +AG D L R+M
Sbjct: 120 SSLKLFNVMQMVGCEPDRVTYCTLIDLQAKAGFHDAAMDLYRQM---------------- 163
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
Q AG PD +++I+ AG+ AY F M G
Sbjct: 164 -------------------QHAGFRPDTFTYSIIIHCLGKAGKLNAAYKLFCEMTDRGYA 204
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
PS +I+ K + + AL+ DL+ G+ + + G +E+ E V
Sbjct: 205 PSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVGYAPDRVTYGIIMEVLGNCGHIEDAEQV 264
Query: 403 LRE 405
E
Sbjct: 265 FEE 267
>gi|297844848|ref|XP_002890305.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336147|gb|EFH66564.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 860
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ II+ GK + A M +G + VT +M+ +++KA N + A + + +++
Sbjct: 472 YSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQSALKLYRDMQ 531
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G DK +Y ++ G L+ E + EM + VY L+ + GN E
Sbjct: 532 NAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVE 591
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + ++A+ AG+ P+ C L++ + + +AY QNM GL PS + L+L
Sbjct: 592 KAWQWYQAMLHAGLLPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Query: 353 SAC 355
S C
Sbjct: 652 SCC 654
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 114/259 (44%), Gaps = 6/259 (2%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + + N Y ++IH YG+ + A N M+ G D+VT ++ +++KAG
Sbjct: 390 MVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGF 449
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L +A + ++ ++ G D +Y ++ +AG L L EM Q Y
Sbjct: 450 LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNI 509
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ ++ N + A +++ +Q AG PD ++++ G ++A F M++
Sbjct: 510 MMDLHAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKN 569
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
P + L++ K + +A ++ + G + +L + F R+ + E
Sbjct: 570 WIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLLPNVPTCNSLLSTFLRVNKIAEAY 629
Query: 401 HVLRE---YGLR---ETYS 413
+L+ GLR +TY+
Sbjct: 630 ELLQNMLALGLRPSLQTYT 648
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/236 (19%), Positives = 100/236 (42%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+ F+ + YT ++ G+ Q L M R G + VT ++ Y +A L
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A F +++ G D+ +Y +++ + +AG LD + + M A + + Y ++
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G+ A ++F + G TP+ ++++ + A Q A +++M+ AG E
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQSALKLYRDMQNAGFE 536
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
P ++++ L A ++++ ++ + L + + G VE+
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEK 592
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 100/249 (40%), Gaps = 9/249 (3%)
Query: 158 ELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR-GFICDQVTLTVMVVMYS 216
L L ++++AN K ++ YG NA +KR+ GF D T T MV
Sbjct: 324 NLGLRIDAYQAN--QVLKQMNDYG------NALGFFYWLKRQPGFKHDGHTYTTMVGNLG 375
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
+A + +E+ G + +Y ++ +Y RA L+ + +M
Sbjct: 376 RAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRV 435
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
Y L+ ++ G + A +++ +Q G++PD +++IN AG A+ F M
Sbjct: 436 TYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEM 495
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVV 396
G P+ +++ K AL+ D++ GF K + G +
Sbjct: 496 VDQGCTPNLVTYNIMMDLHAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 555
Query: 397 EEVEHVLRE 405
EE E V E
Sbjct: 556 EEAEAVFTE 564
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 101/231 (43%), Gaps = 1/231 (0%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKL 233
T +I+ Y KK ++ A + +M +G + D T TV++ K + AEE F E++
Sbjct: 561 TGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRG 620
Query: 234 LGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEG 293
G D SYG ++ + + G + + + EM + + +Y LL G+ +G E
Sbjct: 621 KGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEK 680
Query: 294 AQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILS 353
A+ + + + G+ P+A +I+ Y +G +A+ F M+ GL P ++
Sbjct: 681 AKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVD 740
Query: 354 ACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
C + N + RA+ + + G L W + G E VL
Sbjct: 741 GCCRLNDVERAIT-IFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLN 790
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 92/180 (51%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+++++ + + YT +++G K ++ +AE M+ +G D + V++ +SK G
Sbjct: 582 SMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLG 641
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
N++ A F+E+ G + Y ++ + R+G +++ + LL EM + ++ + Y
Sbjct: 642 NMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYC 701
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
++ GY +G+ A R+F+ ++ G+ PD+ + L++ ++A T F +K
Sbjct: 702 TIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKG 761
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 111/276 (40%), Gaps = 16/276 (5%)
Query: 134 RRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTL 193
R D + VLK++K E+ +I Y +I G K ++ A + L
Sbjct: 467 RFGDAMRVLKEMK----------------EQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 194 LAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRA 253
+ M G + T + Y +A A++ +E++ G +K ++ Y +
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKK 570
Query: 254 GMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
+ R M Q + ++ Y L+ G N + A+ +F ++ GI PD
Sbjct: 571 EKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSY 630
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
+LIN + G QKA + F M + GL P+ ++L + ++ +A E L ++
Sbjct: 631 GVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV 690
Query: 374 DGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLR 409
G CT+ + + G + E + E L+
Sbjct: 691 KGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLK 726
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 121/304 (39%), Gaps = 46/304 (15%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++EE N+ Y ++ G+ + +I+ A+ L M +G + VT ++ Y K+G+
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG--------------------- 259
L A F+E+KL G D Y ++V R ++R
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNAL 772
Query: 260 --------------EVLLREMDAQEVYVGSE---VYKALLRGYSMNGNSEGAQRVFEAIQ 302
EVL R MD G Y ++ GN E A+ +F +Q
Sbjct: 773 INWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQ 832
Query: 303 FAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLN 362
A + P L+N Y G+ + + F AG+EP ++I++A KE
Sbjct: 833 NANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTT 892
Query: 363 RALE-----FLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRETYSKIPG 417
+AL F + DG + L + F ++G +E E V+ E +R Y IP
Sbjct: 893 KALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVM-ENMVRLQY--IPD 949
Query: 418 SRSI 421
S ++
Sbjct: 950 SATV 953
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 99/237 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E + N Y I GY + + +A+ + M+ G + ++V T ++ Y K
Sbjct: 513 MVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEK 572
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + + G D ++Y ++ + +D E + REM + + Y
Sbjct: 573 VIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGV 632
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G+S GN + A +F+ + G+TP+ + +L+ + +G+ +KA M G
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
L P+ I+ K L A +++ G + TL RL VE
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVE 749
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 88/204 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I G K A+ + M G + + SK G ++ A+ F+ +
Sbjct: 315 YSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMI 374
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G ++Y S++ Y R + +G LL EM + + + Y +++G +G+ +
Sbjct: 375 ASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLD 434
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
GA + + + +G P+ + LI + + A + M++ G+ P C ++
Sbjct: 435 GAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLI 494
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
K +++ A FL+++ +G
Sbjct: 495 IGLSKAKRMDEARSFLVEMVENGL 518
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/233 (19%), Positives = 95/233 (40%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ G + A N + M G + V T ++ + + A +E+K
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK 479
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D Y S+++ +A +D L EM + + Y A + GY
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFA 539
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + ++ G+ P+ +C LIN Y + +A +A+++M G+ K +++
Sbjct: 540 SADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLM 599
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ K ++++ A E ++ G + L F +LG +++ + E
Sbjct: 600 NGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 96/234 (41%), Gaps = 2/234 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I GY ++ ++ L+ MK+R + T +V +G+L A +E+
Sbjct: 385 YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI 444
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + Y +++ +++ +L+EM Q + Y +L+ G S +
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMD 504
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK-CVALI 351
A+ + G+ P+A I+ Y A + A + MR+ G+ P+ C LI
Sbjct: 505 EARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLI 564
Query: 352 LSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
C+KE + + +++ K + + FK V++ E + RE
Sbjct: 565 NEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKN-DKVDDAEEIFRE 617
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 64/144 (44%)
Query: 195 AMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG 254
+M +G + + T V++ K L+ A+ E+ LG LD +Y ++ ++
Sbjct: 267 SMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGR 326
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
D + L+ EM + + + +Y + S G E A+ +F+ + +G+ P A+ A
Sbjct: 327 NADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYA 386
Query: 315 LLINAYQMAGQSQKAYTAFQNMRK 338
LI Y ++ Y M+K
Sbjct: 387 SLIEGYCREKNVRQGYELLVEMKK 410
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 71/167 (42%), Gaps = 9/167 (5%)
Query: 161 LLEESFE----ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS 216
L++ SF+ N Y +I K+ ++ A+ M+ + +T T ++ Y
Sbjct: 792 LMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYD 851
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY---- 272
K G F+E G D Y ++ A+++ GM + VL+ +M A+
Sbjct: 852 KMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGC 911
Query: 273 -VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLIN 318
+ +ALL G++ G E A++V E + PD+ LIN
Sbjct: 912 KLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELIN 958
>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1080
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 101/226 (44%), Gaps = 5/226 (2%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
L+ ++ EL + F N+ ++ GK M+I+ M R+G+ VT +
Sbjct: 777 LFAEMKELGCGPDEFTYNL-----LLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTI 831
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ K+ L+ A + + + G +YG ++ ++AG ++ E L EM
Sbjct: 832 ISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGC 891
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
+Y LL G+ + GN+E +F+ + GI PD + ++I+ AGQ T
Sbjct: 892 KANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLT 951
Query: 332 AFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
F+ + + GLEP L++ K +L A+ ++++ G +
Sbjct: 952 YFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIV 997
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 84/199 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ +G Q+ AMK G+ + V T ++ + G + A E F+E+K
Sbjct: 303 YITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMK 362
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G ++ SY S++ +++A L + MD + + Y +G S
Sbjct: 363 QKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESI 422
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + +E ++ GI PD ++ +G+ A F ++ G+ P +++
Sbjct: 423 KAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMI 482
Query: 353 SACEKENQLNRALEFLIDL 371
C K ++ + A++ D+
Sbjct: 483 KCCSKASKFDEAVKIFYDM 501
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 94/217 (43%), Gaps = 2/217 (0%)
Query: 154 LQVAELALLEESFEANIRD--YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
L+ EL +SF +++ Y +I G + I AE MK G D+ T ++
Sbjct: 737 LEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLL 796
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ K+ ++ + EE+ G +Y +++ V++ L++ L + +Q
Sbjct: 797 LDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGF 856
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
Y LL G G E A+ +F + G + + +L+N +++AG ++K
Sbjct: 857 SPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCH 916
Query: 332 AFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFL 368
FQ+M G+ P K +I+ K QLN L +
Sbjct: 917 LFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYF 953
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/284 (20%), Positives = 107/284 (37%), Gaps = 42/284 (14%)
Query: 173 YTKI--IHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
YT + I+ YGK + A MK +G + D V ++ +K+G L MA+ F E
Sbjct: 406 YTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHE 465
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
+K +G D +Y M+ +A D + +M +L+ G
Sbjct: 466 LKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGR 525
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
+ A R+F ++ + P L+ G+ ++ + M + P+
Sbjct: 526 GDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNT 585
Query: 351 ILSACEKENQLNRALEFLIDLERDG---------------------------------FM 377
IL K +N AL+ L + G +
Sbjct: 586 ILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVL 645
Query: 378 VGKEAS-CTLAAWFKRLGVVEEVEHVLREYGLRETYSKIPGSRS 420
+ A+ CT+ F ++G+++E H++++Y L+ PGS++
Sbjct: 646 IPDYATLCTILPSFVKIGLMKEALHIIKDYFLQ------PGSKT 683
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 102/249 (40%), Gaps = 4/249 (1%)
Query: 132 KPRRADWLAVLK-QLKLME-HPLYLQVAEL--ALLEESFEANIRDYTKIIHGYGKKMQIQ 187
KPR A A L+LM H +AE+ + + +AN+ + I G G + ++
Sbjct: 83 KPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLR 142
Query: 188 NAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMV 247
+A L MK G + + T +V K+G + A E + + + G R+Y ++
Sbjct: 143 SAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLM 202
Query: 248 MAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGIT 307
+A+ + ++ LLREM+A V Y +R + A R+ ++ G
Sbjct: 203 VAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCK 262
Query: 308 PDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
PD +LI AG+ A F M+K+ +P +L +E
Sbjct: 263 PDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEI 322
Query: 368 LIDLERDGF 376
++ DG+
Sbjct: 323 WNAMKADGY 331
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/305 (19%), Positives = 126/305 (41%), Gaps = 54/305 (17%)
Query: 109 QIICVSPETGNLSDLLAAWVRF----MKPRRADWLAVLKQLKLMEHPLYLQVAEL--ALL 162
Q++C + G +SD + + KP R ++ +L K ++ V E+ A+
Sbjct: 273 QVLC---DAGRISDAKDVFWKMKKSDQKPDRVTYITLLD--KFGDNGDSQSVMEIWNAMK 327
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+ + N+ YT +I + ++ A MK++G + +Q + ++ + KA
Sbjct: 328 ADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFG 387
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG----MLDRGEVLLREMDAQEVYVGSEVY 278
A E F+ + + G + ++ + Y ++G + R E++ + +V G+
Sbjct: 388 DALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGN--- 444
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDA-------RMCA----------------- 314
A+L G + +G A+RVF ++ G++PD + C+
Sbjct: 445 -AVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIE 503
Query: 315 -----------LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNR 363
LI+ AG+ +A+ F +++ LEP+D +L+ +E ++
Sbjct: 504 NNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKE 563
Query: 364 ALEFL 368
+ L
Sbjct: 564 VMHLL 568
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 78/184 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L+ + F Y ++ G K +I++AEN M G + +++ + AGN
Sbjct: 851 LMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGN 910
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ F+++ G D +SY ++ +AG L+ G R++ + Y
Sbjct: 911 TEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNL 970
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G + E A +F +Q GI P+ LI AG++ +A ++ + G
Sbjct: 971 LIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKG 1030
Query: 341 LEPS 344
+P+
Sbjct: 1031 WKPN 1034
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 88/212 (41%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
E + ++ +T +I +I +A++ MK+ D+VT ++ + G+ +
Sbjct: 259 EGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQS 318
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
E + +K G + +Y +++ A + G + + EM + + Y +L+
Sbjct: 319 VMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLIS 378
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G+ A +F+ + G P+ L IN Y +G+S KA ++ M+ G+ P
Sbjct: 379 GFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVP 438
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDG 375
+L K +L A +L+ G
Sbjct: 439 DVVAGNAVLFGLAKSGRLGMAKRVFHELKAMG 470
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 68/150 (45%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++++ +I+ YT II K Q+ + + G D +T +++ K+
Sbjct: 921 MVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKR 980
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ A F E++ G + +Y S+++ +AG + E+ + Y A
Sbjct: 981 LEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNA 1040
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDA 310
L+RGYS++G+++ A + + G P++
Sbjct: 1041 LIRGYSVSGSTDSAYAAYGRMIVGGCLPNS 1070
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/207 (17%), Positives = 86/207 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++R Y+ ++ +GK+ ++ L M+ G + + T+ + + +A A
Sbjct: 194 SVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRIL 253
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+++ G D ++ ++ AG + + + +M + Y LL + N
Sbjct: 254 AKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDN 313
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G+S+ ++ A++ G + +I+A G+ +A F M++ G+ P
Sbjct: 314 GDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSY 373
Query: 349 ALILSACEKENQLNRALEFLIDLERDG 375
++S K ++ ALE ++ G
Sbjct: 374 NSLISGFLKADRFGDALELFKHMDIHG 400
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 101/231 (43%), Gaps = 1/231 (0%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKL 233
T +I+ Y KK ++ A + +M +G + D T TV++ K + AEE F E++
Sbjct: 561 TGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRG 620
Query: 234 LGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEG 293
G D SYG ++ + + G + + + EM + + +Y LL G+ +G E
Sbjct: 621 KGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEK 680
Query: 294 AQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILS 353
A+ + + + G+ P+A +I+ Y +G +A+ F M+ GL P ++
Sbjct: 681 AKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVD 740
Query: 354 ACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
C + N + RA+ + + G L W + G E VL
Sbjct: 741 GCCRLNDVERAIT-IFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLN 790
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 92/180 (51%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+++++ + + YT +++G K ++ +AE M+ +G D + V++ +SK G
Sbjct: 582 SMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLG 641
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
N++ A F+E+ G + Y ++ + R+G +++ + LL EM + ++ + Y
Sbjct: 642 NMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYC 701
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
++ GY +G+ A R+F+ ++ G+ PD+ + L++ ++A T F +K
Sbjct: 702 TIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKG 761
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 112/276 (40%), Gaps = 16/276 (5%)
Query: 134 RRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTL 193
R D + VLK++K E+ +I Y +I G K ++ A + L
Sbjct: 467 RFGDAMRVLKEMK----------------EQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 194 LAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRA 253
+ M G + T + Y +A A++ +E++ G +K ++ Y +
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKK 570
Query: 254 GMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
G + R M Q + ++ Y L+ G N + A+ +F ++ GI PD
Sbjct: 571 GKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSY 630
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
+LIN + G QKA + F M + GL P+ ++L + ++ +A E L ++
Sbjct: 631 GVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV 690
Query: 374 DGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLR 409
G CT+ + + G + E + E L+
Sbjct: 691 KGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLK 726
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 121/304 (39%), Gaps = 46/304 (15%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++EE N+ Y ++ G+ + +I+ A+ L M +G + VT ++ Y K+G+
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG--------------------- 259
L A F+E+KL G D Y ++V R ++R
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNAL 772
Query: 260 --------------EVLLREMDAQEVYVGSE---VYKALLRGYSMNGNSEGAQRVFEAIQ 302
EVL R MD G Y ++ GN E A+ +F +Q
Sbjct: 773 INWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQ 832
Query: 303 FAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLN 362
A + P L+N Y G+ + + F AG+EP ++I++A KE
Sbjct: 833 NANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTT 892
Query: 363 RALE-----FLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRETYSKIPG 417
+AL F + DG + L + F ++G +E E V+ E +R Y IP
Sbjct: 893 KALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVM-ENMVRLQY--IPD 949
Query: 418 SRSI 421
S ++
Sbjct: 950 SATV 953
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 100/237 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E + N Y I GY + + +A+ + M+ G + ++V T ++ Y K G
Sbjct: 513 MVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGK 572
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + + G D ++Y ++ + +D E + REM + + Y
Sbjct: 573 VIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGV 632
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G+S GN + A +F+ + G+TP+ + +L+ + +G+ +KA M G
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
L P+ I+ K L A +++ G + TL RL VE
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVE 749
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 88/204 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I G K A+ + M G + + SK G ++ A+ F+ +
Sbjct: 315 YSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMI 374
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G ++Y S++ Y R + +G LL EM + + + Y +++G +G+ +
Sbjct: 375 ASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLD 434
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
GA + + + +G P+ + LI + + A + M++ G+ P C ++
Sbjct: 435 GAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLI 494
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
K +++ A FL+++ +G
Sbjct: 495 IGLSKAKRMDEARSFLVEMVENGL 518
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 96/233 (41%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ G + A N + M G + V T ++ + + A +E+K
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK 479
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D Y S+++ +A +D L EM + + Y A + GY
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFA 539
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + ++ G+ P+ +C LIN Y G+ +A +A+++M G+ K +++
Sbjct: 540 SADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLM 599
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ K ++++ A E ++ G + L F +LG +++ + E
Sbjct: 600 NGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 64/144 (44%)
Query: 195 AMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG 254
+M +G + + T V++ K L+ A+ E+ LG LD +Y ++ ++
Sbjct: 267 SMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGR 326
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
D + L+ EM + + + +Y + S G E A+ +F+ + +G+ P A+ A
Sbjct: 327 NADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYA 386
Query: 315 LLINAYQMAGQSQKAYTAFQNMRK 338
LI Y ++ Y M+K
Sbjct: 387 SLIEGYCREKNVRQGYELLVEMKK 410
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 57/130 (43%)
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
Y + N++ E E+K + +YG++V +G LD +++EM A
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+Y L++ + N A RV + ++ GI PD LI A + +A +
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511
Query: 335 NMRKAGLEPS 344
M + GL+P+
Sbjct: 512 EMVENGLKPN 521
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 71/167 (42%), Gaps = 9/167 (5%)
Query: 161 LLEESFE----ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS 216
L++ SF+ N Y +I K+ ++ A+ M+ + +T T ++ Y
Sbjct: 792 LMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYD 851
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY---- 272
K G F+E G D Y ++ A+++ GM + VL+ +M A+
Sbjct: 852 KMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGC 911
Query: 273 -VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLIN 318
+ +ALL G++ G E A++V E + PD+ LIN
Sbjct: 912 KLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELIN 958
>gi|125603908|gb|EAZ43233.1| hypothetical protein OsJ_27833 [Oryza sativa Japonica Group]
Length = 567
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 103/206 (50%), Gaps = 17/206 (8%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
A++ + +I GY K ++++A+ M RR + V+ + MV Y+ AG L +A E
Sbjct: 160 ADVVSWNTVIGGYVKCGEMESAKRVFDEMPRR----NGVSWSTMVGGYAAAGELDVAREM 215
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
F+ + +G + ++ SMV + R G+L + EM + + + A+LRGYS+
Sbjct: 216 FDRMPAIGR--NVVTWNSMVTGFARHGLLPLARKMFDEMPVRNLV----SWNAMLRGYSV 269
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR-KAGLEPSDK 346
N + +GA+ +F+ + D +I+ Y AG+ Q F+ M+ ++ ++P++
Sbjct: 270 NSDMDGARELFDVMP----EKDVVSWTCMISGYAQAGRYQDTLELFRAMQTESNVQPNEV 325
Query: 347 CVALILSACEKENQL--NRALEFLID 370
+ +LSAC L R + ID
Sbjct: 326 TMVSVLSACANLTALEEGRWVHAFID 351
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 107/251 (42%), Gaps = 32/251 (12%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ + ++ GY + A M + D V+ T M+ Y++AG + E F
Sbjct: 256 NLVSWNAMLRGYSVNSDMDGARELFDVMPEK----DVVSWTCMISGYAQAGRYQDTLELF 311
Query: 229 EEIKLLG--EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE--VYKALLRG 284
++ +P ++ + S++ A L+ G + +D ++ + +E + AL+
Sbjct: 312 RAMQTESNVQP-NEVTMVSVLSACANLTALEEGRWVHAFIDKHKMVLNNEYNLGAALIDM 370
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
Y+ G ++ A ++F ++ ++ LI M G ++ + AF+ M++ G +P+
Sbjct: 371 YAKCGRTDIAVKIFNSLDRKNVSA----WNALITRLAMNGNARDSVDAFEQMKRTGEKPN 426
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFK----------RLG 394
D +L+AC L+D R F ++C + K R G
Sbjct: 427 DITFVGVLTACSHGG--------LVDEGRRCFQ-SMASTCGVQPEVKHYGCMVDMLGRAG 477
Query: 395 VVEEVEHVLRE 405
++EE E ++R
Sbjct: 478 LLEEAEELIRS 488
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 76/176 (43%), Gaps = 7/176 (3%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ + +I +++ + MKR G + +T ++ S G + F
Sbjct: 391 NVSAWNALITRLAMNGNARDSVDAFEQMKRTGEKPNDITFVGVLTACSHGGLVDEGRRCF 450
Query: 229 EEI-KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMD-AQEVYVGSEVYKALLRGYS 286
+ + G + + YG MV RAG+L+ E L+R M A +V V+ ALL
Sbjct: 451 QSMASTCGVQPEVKHYGCMVDMLGRAGLLEEAEELIRSMPMAPDVM----VFGALLGACR 506
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLI-NAYQMAGQSQKAYTAFQNMRKAGL 341
M+ + A+RV I + C +LI + Y AG+ A Q ++++G+
Sbjct: 507 MHKRFDVAERVQSEIHSLNLNAQQSGCHVLISDIYAAAGKWFDVLEARQVVQRSGI 562
>gi|334182677|ref|NP_001185030.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332191659|gb|AEE29780.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 886
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ II+ GK + A M +G + VT +M+ +++KA N + A + + +++
Sbjct: 472 YSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQ 531
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G DK +Y ++ G L+ E + EM + VY L+ + GN E
Sbjct: 532 NAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVE 591
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + ++A+ AG+ P+ C L++ + + +AY QNM GL PS + L+L
Sbjct: 592 KAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Query: 353 SAC 355
S C
Sbjct: 652 SCC 654
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 113/259 (43%), Gaps = 6/259 (2%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + + N Y ++IH YG+ + A N M+ G D+VT ++ +++KAG
Sbjct: 390 MVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGF 449
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L +A + ++ ++ G D +Y ++ +AG L L EM Q Y
Sbjct: 450 LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNI 509
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ ++ N + A +++ +Q AG PD ++++ G ++A F M++
Sbjct: 510 MMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKN 569
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
P + L++ K + +A ++ + G +L + F R+ + E
Sbjct: 570 WIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAY 629
Query: 401 HVLRE---YGLR---ETYS 413
+L+ GLR +TY+
Sbjct: 630 ELLQNMLALGLRPSLQTYT 648
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/236 (19%), Positives = 100/236 (42%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+ F+ + YT ++ G+ Q L M R G + VT ++ Y +A L
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A F +++ G D+ +Y +++ + +AG LD + + M A + + Y ++
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G+ A ++F + G TP+ ++++ + A Q A +++M+ AG E
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
P ++++ L A ++++ ++ + L + + G VE+
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEK 592
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 100/249 (40%), Gaps = 9/249 (3%)
Query: 158 ELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR-GFICDQVTLTVMVVMYS 216
L L ++++AN K ++ YG NA +KR+ GF D T T MV
Sbjct: 324 NLGLRIDAYQAN--QVLKQMNDYG------NALGFFYWLKRQPGFKHDGHTYTTMVGNLG 375
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
+A + +E+ G + +Y ++ +Y RA L+ + +M
Sbjct: 376 RAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRV 435
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
Y L+ ++ G + A +++ +Q G++PD +++IN AG A+ F M
Sbjct: 436 TYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEM 495
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVV 396
G P+ +++ K AL+ D++ GF K + G +
Sbjct: 496 VDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 555
Query: 397 EEVEHVLRE 405
EE E V E
Sbjct: 556 EEAEAVFTE 564
>gi|115489040|ref|NP_001067007.1| Os12g0557800 [Oryza sativa Japonica Group]
gi|113649514|dbj|BAF30026.1| Os12g0557800 [Oryza sativa Japonica Group]
Length = 682
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 108/255 (42%), Gaps = 1/255 (0%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
+++ Y +I + K + AE + M+ +GF+ + VT ++ YSK GN+ A+
Sbjct: 417 SSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVV 476
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
+ + G D ++ S++ LD V EM V ++ Y L+
Sbjct: 477 LKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCS 536
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G+ A + ++ G+TPDA LI ++ + KA F +M + G+ P
Sbjct: 537 AGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDKAEDIFNDMVRFGVVPDSYT 596
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASC-TLAAWFKRLGVVEEVEHVLREY 406
++ A E ++N+A E L ER G S + A ++G E ++ +Y
Sbjct: 597 YNSLIKALCDERRVNKAKEILFARERSGCSTSNNQSYWPIVAALAKMGQFSEAGELMDKY 656
Query: 407 GLRETYSKIPGSRSI 421
R S ++SI
Sbjct: 657 LSRNAQSSCGSNQSI 671
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 80/186 (43%)
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
N A + L G SY ++ +V+AG +D+ E +++EM + +
Sbjct: 399 NFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFN 458
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ GYS GN A+ V + + G PD LI+ Q A+ F+ M +
Sbjct: 459 TLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEW 518
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEV 399
G+ P+ + +++ +N+A++ L ++ DG + L F R+ V++
Sbjct: 519 GVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDKA 578
Query: 400 EHVLRE 405
E + +
Sbjct: 579 EDIFND 584
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 70/166 (42%), Gaps = 9/166 (5%)
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
F+++ G D +Y S+V R G++D L+R+M+ + + Y L+ G+
Sbjct: 197 FQQMPADGCRPDHFTYNSLVHGVCRRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCN 256
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM--RKAGLEPSD 345
G E A R+ + ++ G+ P L++ + KAY + + L PS
Sbjct: 257 AGRVEEAFRMLDKMKEKGVAPSEATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLHPS- 315
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEA-----SCTL 386
+L K++ A+EF + G+++ A SC L
Sbjct: 316 -ACHTMLYCLSKKDMAKEAVEFEKRMSARGYLLDSTAFGIVMSCAL 360
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 113/255 (44%), Gaps = 36/255 (14%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
+ +LE+ + ++ Y +I G+ K +I++A+ L MKR+GF D VT +M+ +
Sbjct: 33 MGILEKHGKPDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGK 92
Query: 219 GNLKMAEETFEEI------------------------------KLLGEPL------DKRS 242
G + +A + FEE+ KLL E L D +
Sbjct: 93 GKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFT 152
Query: 243 YGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQ 302
Y + + G +DR +R ++++ Y LLR G + ++ I
Sbjct: 153 YNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIF 212
Query: 303 FAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLN 362
G P+ ++LI++ G+ +++ + M++ GL P C +++A +E +L+
Sbjct: 213 SRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLD 272
Query: 363 RALEFLIDLERDGFM 377
A+EFL + DGF+
Sbjct: 273 MAIEFLDCMICDGFL 287
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 88/224 (39%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
L L+V E L + + + + YT +I Y + I A L M RG D T V+
Sbjct: 97 LALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVI 156
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
K G + A E + G D +Y ++ A + G D GE + E+ ++
Sbjct: 157 TRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGC 216
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
Y L+ +G E + + + ++ G+TPDA LI A+ G+ A
Sbjct: 217 EPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIE 276
Query: 332 AFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
M G P I++A K + A+E L+ G
Sbjct: 277 FLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVG 320
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 47/245 (19%), Positives = 90/245 (36%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L E + Y I G K+ ++ A + + RG D +T +++ G
Sbjct: 141 MLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGK 200
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
E+ EI G + +Y ++ + R G ++ L++ M + + + Y
Sbjct: 201 WDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDP 260
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ + G + A + + G PD ++ A G A F + + G
Sbjct: 261 LIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVG 320
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
P+ +LSA RAL + + G +L + R G+V+E
Sbjct: 321 CPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAI 380
Query: 401 HVLRE 405
+L +
Sbjct: 381 GLLAD 385
>gi|302808451|ref|XP_002985920.1| hypothetical protein SELMODRAFT_123132 [Selaginella moellendorffii]
gi|300146427|gb|EFJ13097.1| hypothetical protein SELMODRAFT_123132 [Selaginella moellendorffii]
Length = 574
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 90/193 (46%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
F + Y+ IIH GK ++ A M RG+ VT +++ +++KAG
Sbjct: 165 HAGFRPDTFTYSIIIHCLGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGKFD 224
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
MA + + +++ +G D+ +YG ++ G ++ E + EM+ + ++ ++
Sbjct: 225 MALKLYSDLQEVGYAPDRVTYGIIMEVLGNCGHIEDAEQVFEEMERAGWVADNPIFGLMV 284
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
+ GN+E A + F + +G+ P+ C L++AY + A M K GL
Sbjct: 285 DMWGKTGNAEKAAQWFNRMLDSGLQPNVPACNSLLSAYLRSSFYDAAGGVLGGMAKWGLY 344
Query: 343 PSDKCVALILSAC 355
P+ + +LS+C
Sbjct: 345 PTLQTYTSLLSSC 357
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 96/229 (41%), Gaps = 35/229 (15%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ E E N+ Y ++IH YG+ + ++ M+ G D+VT ++ + +KAG
Sbjct: 93 MIREGCEPNVVTYNRLIHCYGRANDLDSSLKLFNVMQMVGCEPDRVTYCTLIDLQAKAGF 152
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM-------------- 266
A E + +++ G D +Y ++ +AG L+ L EM
Sbjct: 153 HDAAMELYRQMQHAGFRPDTFTYSIIIHCLGKAGKLNAAYKLFCEMTDRGYAPSLVTYNI 212
Query: 267 -------------------DAQEVYVGSE--VYKALLRGYSMNGNSEGAQRVFEAIQFAG 305
D QEV + Y ++ G+ E A++VFE ++ AG
Sbjct: 213 IIDLHAKAGKFDMALKLYSDLQEVGYAPDRVTYGIIMEVLGNCGHIEDAEQVFEEMERAG 272
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSA 354
D + L+++ + G ++KA F M +GL+P+ +LSA
Sbjct: 273 WVADNPIFGLMVDMWGKTGNAEKAAQWFNRMLDSGLQPNVPACNSLLSA 321
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 92/243 (37%), Gaps = 35/243 (14%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+ F+ ++ YT I+ G+ N L M R G + VT ++ Y +A +L
Sbjct: 60 QAGFKHDVHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDLD 119
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
+ + F ++++G D+ +Y +++ +AG D L R+M
Sbjct: 120 SSLKLFNVMQMVGCEPDRVTYCTLIDLQAKAGFHDAAMELYRQM---------------- 163
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
Q AG PD +++I+ AG+ AY F M G
Sbjct: 164 -------------------QHAGFRPDTFTYSIIIHCLGKAGKLNAAYKLFCEMTDRGYA 204
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
PS +I+ K + + AL+ DL+ G+ + + G +E+ E V
Sbjct: 205 PSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVGYAPDRVTYGIIMEVLGNCGHIEDAEQV 264
Query: 403 LRE 405
E
Sbjct: 265 FEE 267
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 110/233 (47%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y II K+ ++ A + + M G + D VT ++ K+G ++ A F E++
Sbjct: 83 YNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEME 142
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
LG ++RS+ ++++ + +D+ + EM+A+++ S Y L+ G + G
Sbjct: 143 RLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLN 202
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A ++F + +GITP A ++I+ +A +A F++MR G PS +++
Sbjct: 203 EAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILI 262
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
A K +++ A L + DG + TL + + V++ H+L +
Sbjct: 263 DAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLED 315
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 88/208 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+ ++ ++ Y+ +I G ++ +A + L M +R VT ++ KAG
Sbjct: 281 MTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGR 340
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+K A E + + G+ D +Y ++V + RAG +R LL +M A+ + Y A
Sbjct: 341 IKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTA 400
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G A VF ++ +G P+ LI + AGQ F M AG
Sbjct: 401 LVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAG 460
Query: 341 LEPSDKCVALILSACEKENQLNRALEFL 368
+ P + + K + RALE L
Sbjct: 461 ISPDHVVYGTLAAELCKSGRSARALEIL 488
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 97/232 (41%), Gaps = 2/232 (0%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
+IHG K +I+ A L AM G D VT +V + +AG + A E ++ G
Sbjct: 331 LIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARG 390
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
+ +Y ++V +A L + +M + Y AL+ G+ G +G
Sbjct: 391 LAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGL 450
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS--DKCVALILS 353
++F + AGI+PD + L +G+S +A + R++ + D+ +
Sbjct: 451 KLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVD 510
Query: 354 ACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ AL F+ D+ R G + E +L A + G E VL E
Sbjct: 511 GLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEE 562
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 87/215 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L+ + Y +IHG + A +M+ +G + T +++ + K G
Sbjct: 211 MLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGK 270
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + + G D +Y +++ +D LL +M ++
Sbjct: 271 MDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNT 330
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G G + A+ V +A+ +G +PD L++ + AGQ+++A +M G
Sbjct: 331 LIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARG 390
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
L P+ ++S K N+L A ++ G
Sbjct: 391 LAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSG 425
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 99/230 (43%), Gaps = 9/230 (3%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
A++ ++ Y ++HG+ + Q + A L M RG + VT T +V KA
Sbjct: 350 AMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKAN 409
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
L A F ++K G + +Y ++++ + AG +D G L EM + VY
Sbjct: 410 RLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYG 469
Query: 280 ALLRGYSMNGNSEGAQRVF----EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
L +G S A + E+++ + A ++ AG+ + A ++
Sbjct: 470 TLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFA--VDGLLDAGKMEMALGFVRD 527
Query: 336 MRKAGLEPS-DKCVALILSACE--KENQLNRALEFLIDLERDGFMVGKEA 382
M + G P+ ++C +L+ C+ + + LE ++DL G GK A
Sbjct: 528 MVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMDLAYGGKARGKAA 577
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/211 (18%), Positives = 91/211 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E+ ++ Y ++ G K +++ A M+R G ++ + +++ +
Sbjct: 106 MIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSK 165
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + F E++ P D SYG ++ +AG L+ L R M + + Y
Sbjct: 166 IDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNV 225
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G + + A +F++++ G P +LI+A+ G+ +A+ + M G
Sbjct: 226 VIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDG 285
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDL 371
P + ++S +++ A L D+
Sbjct: 286 HVPDVVTYSTLISGLCSIARVDDARHLLEDM 316
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 55/133 (41%)
Query: 266 MDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQ 325
M+ + V S Y L+ G + G A+ +F+ + +G+TP LI+ MA
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 326 SQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCT 385
A F +M + G PS +I+ A K L A + + + DG + T
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 386 LAAWFKRLGVVEE 398
+ + G VEE
Sbjct: 121 VMDGLCKSGRVEE 133
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/172 (19%), Positives = 70/172 (40%)
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
D SYG ++ +AG L+ L +++ V + Y +L+ G M + + A+ +F
Sbjct: 9 DSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELF 68
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
+ G P ++I+A G ++A + M + G P ++ K
Sbjct: 69 ADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKS 128
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRE 410
++ AL ++ER G + + T+ + +++ V E R+
Sbjct: 129 GRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180
>gi|297744686|emb|CBI37948.3| unnamed protein product [Vitis vinifera]
Length = 1550
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 94/214 (43%), Gaps = 2/214 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ E N+ Y +I G G+ Q+ A M+ + D+V ++ ++G
Sbjct: 988 MVNAEVEPNVHTYGALIDGCGRAGQVAKAFGAYGIMRSKKVEPDRVVFNALITACGQSGA 1047
Query: 221 LKMAEETFEEIKLLGEPLDKR--SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
+ A + E++ +P+D + G+++ A AG +DR + + +D + EVY
Sbjct: 1048 VDRAFDVLAEMRAETQPIDPDHITVGALIKACTNAGQVDRAREVYKMIDQYNIKGTPEVY 1107
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
+ +S G+ E A V+ + G+ PD + LI+ AG+ A+ Q R
Sbjct: 1108 TIAVSSHSQIGDWEFAYSVYTDMTRKGVVPDEMFLSALIDVAGHAGKLDAAFEVIQEARI 1167
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDLE 372
G+ + ++ AC +ALE +D++
Sbjct: 1168 QGIPLGIVSYSSLMGACSNAKNWQKALELYVDIK 1201
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 76/166 (45%)
Query: 209 TVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
T+ V +S+ G+ + A + ++ G D+ +++ AG LD +++E
Sbjct: 1108 TIAVSSHSQIGDWEFAYSVYTDMTRKGVVPDEMFLSALIDVAGHAGKLDAAFEVIQEARI 1167
Query: 269 QEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
Q + +G Y +L+ S N + A ++ I+ + P LI A Q +K
Sbjct: 1168 QGIPLGIVSYSSLMGACSNAKNWQKALELYVDIKSMKLNPTVSTMNALITALCEGEQLEK 1227
Query: 329 AYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
A +M++AGL P+ +++L A EK++ ++ L L +D
Sbjct: 1228 AMEVLSDMKRAGLCPNTITYSILLVASEKKDDIDVGLMILSQARKD 1273
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 64/144 (44%), Gaps = 11/144 (7%)
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
++Y L+ + +G + VF + A + P+ LI+ AGQ KA+ A+
Sbjct: 963 KLYTTLISTCAKSGKVDAMFEVFHEMVNAEVEPNVHTYGALIDGCGRAGQVAKAFGAYGI 1022
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLID-------LERDGFMVGKE-ASCTLA 387
MR +EP +++AC + ++RA + L + ++ D VG +CT A
Sbjct: 1023 MRSKKVEPDRVVFNALITACGQSGAVDRAFDVLAEMRAETQPIDPDHITVGALIKACTNA 1082
Query: 388 AWFKRLGVVEEVEHVLREYGLRET 411
R EV ++ +Y ++ T
Sbjct: 1083 GQVDR---AREVYKMIDQYNIKGT 1103
>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 713
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 110/252 (43%), Gaps = 3/252 (1%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
A+ E AN+ ++ + + K+ ++ A M+ RG ++ T T ++ KAG
Sbjct: 283 AMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAG 342
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
L A +E+ G PL+ +Y +V + + E +LR M+ V +Y
Sbjct: 343 RLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYT 402
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ G+ MN NSE A + ++ G+ D + LI + +A + M ++
Sbjct: 403 TLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDES 462
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE- 398
GLEP+ ++ AC K ++ A+ L + GF C L + G ++E
Sbjct: 463 GLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEA 522
Query: 399 VEHV--LREYGL 408
+ H +R+ GL
Sbjct: 523 ISHFNKMRDLGL 534
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 93/212 (43%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ YT ++ G K+ ++ AE+ L M++ G +++ T ++ + N + A
Sbjct: 362 NVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLL 421
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E+K G LD YG+++ LD + LL +MD + +Y ++ +
Sbjct: 422 SEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKS 481
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G A + + I +G P+ LI+ AG +A + F MR GL+P+ +
Sbjct: 482 GKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAY 541
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGK 380
++ K LN A++ ++ G + K
Sbjct: 542 TALVDGLCKNGCLNEAVQLFNEMVHKGMSLDK 573
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 74/178 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L+ F+ N+ Y +I G K I A + M+ G + T +V K G
Sbjct: 494 ILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGC 553
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A + F E+ G LDK Y +++ Y++ G L L +M + + Y
Sbjct: 554 LNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTC 613
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
+ G+ A+ VF + GI PD + LI+ YQ G ++A + M +
Sbjct: 614 FISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEMER 671
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 87/211 (41%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E E N YT ++ K ++ A L + GF + +T ++ KAG++
Sbjct: 461 ESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSID 520
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A F +++ LG + ++Y ++V + G L+ L EM + + + VY ALL
Sbjct: 521 EAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALL 580
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
GY GN A + + +G+ D I+ + +A F M G+
Sbjct: 581 DGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIA 640
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLER 373
P ++S +K L A+ ++ER
Sbjct: 641 PDRAVYNCLISKYQKLGNLEEAISLQDEMER 671
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 98/244 (40%), Gaps = 4/244 (1%)
Query: 159 LALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
L LL E E +I Y +I G ++ A++ L M G + + T M+
Sbjct: 418 LGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDA 477
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
K+G + A ++I G + +Y +++ +AG +D +M +
Sbjct: 478 CFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPN 537
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+ Y AL+ G NG A ++F + G++ D + L++ Y G A+
Sbjct: 538 VQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKA 597
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
M +GL+ C +S N + A E ++ G + L + +++LG
Sbjct: 598 KMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLG 657
Query: 395 VVEE 398
+EE
Sbjct: 658 NLEE 661
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/215 (19%), Positives = 87/215 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E+ N+ + +I K+ ++ A + MK G + D VT ++ Y K G
Sbjct: 179 LFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGE 238
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L E+ EE++ G D +Y +++ + + G ++ M + V +
Sbjct: 239 LDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFST 298
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+ + G A ++F ++ G+ + LI+ AG+ A M + G
Sbjct: 299 FVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQG 358
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+ + +++ KE ++ A + L +E+ G
Sbjct: 359 VPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAG 393
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 45/233 (19%), Positives = 98/233 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I G K ++ +A L M R+G + VT TV+V K + AE+ ++
Sbjct: 331 YTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMME 390
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G ++ Y +++ + ++ LL EM + + + +Y AL++G +
Sbjct: 391 KAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLD 450
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ + + +G+ P+ + +++A +G+ +A Q + +G +P+ ++
Sbjct: 451 EAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALI 510
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
K ++ A+ + G +A L + G + E + E
Sbjct: 511 DGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNE 563
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 94/219 (42%), Gaps = 2/219 (0%)
Query: 187 QNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSM 246
Q A MK GF D+VT ++ +Y K+ K A + E+ L G +Y S+
Sbjct: 296 QEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSL 355
Query: 247 VMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGI 306
+ AY R GMLD L +M + Y LL G+ G E A +FE ++ AG
Sbjct: 356 ISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGC 415
Query: 307 TPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALE 366
P+ I Y G+ + F + GL P D L A +N ++ +
Sbjct: 416 KPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSP-DIVTWNTLLAVFGQNGMDSEVS 474
Query: 367 FLI-DLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
+ +++R GF+ +E TL + + R G E+ V R
Sbjct: 475 GVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYR 513
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 78/183 (42%)
Query: 189 AENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVM 248
AE +K RGF D TL MV +Y + + A + +K G +Y S++
Sbjct: 613 AERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMY 672
Query: 249 AYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITP 308
+ R+ + E +LRE+ A+ + Y ++ Y N A R+F ++ +GI P
Sbjct: 673 MHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVP 732
Query: 309 DARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFL 368
D I +Y ++A + M K G P+ I+ K N+ + A F+
Sbjct: 733 DVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFV 792
Query: 369 IDL 371
DL
Sbjct: 793 EDL 795
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 111/262 (42%), Gaps = 13/262 (4%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F +I Y +I Y + + A M +G D T T ++ + +AG ++ A
Sbjct: 345 FSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAM 404
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
FEE++ G + ++ + + Y G + E++ + + LL +
Sbjct: 405 SIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVF 464
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
NG VF+ ++ AG P+ LI+AY G ++A T ++ M AG+ P
Sbjct: 465 GQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDL 524
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEAS-CTLAAWF---KRLGVVEEVEH 401
+L+A + ++ + L ++E DG E + C+L + K +G++ H
Sbjct: 525 STYNTVLAALARGGMWEQSEKVLAEME-DGRCKPNELTYCSLLHAYANGKEIGLM----H 579
Query: 402 VLREYGLRETYSKIPGSRSIAL 423
L E E YS + R++ L
Sbjct: 580 SLAE----EVYSGVIEPRAVLL 597
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 100/244 (40%), Gaps = 1/244 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLL-AMKRRGFICDQVTLTVMVVMYSKAGNL 221
E+ + + Y I++ +GK N +L+ MK G D T ++ +
Sbjct: 236 EDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLH 295
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
+ A + FEE+K G DK +Y +++ Y ++ +L EM Y +L
Sbjct: 296 QEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSL 355
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+ Y+ +G + A + + G PD L++ ++ AG+ + A + F+ MR AG
Sbjct: 356 ISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGC 415
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEH 401
+P+ + + ++ ++ G TL A F + G+ EV
Sbjct: 416 KPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSG 475
Query: 402 VLRE 405
V +E
Sbjct: 476 VFKE 479
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/194 (20%), Positives = 83/194 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+ E+ + ++ YT ++ G+ + ++++A + M+ G + T + MY G
Sbjct: 375 MAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGK 434
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ F+EI + G D ++ +++ + + GM + +EM E +
Sbjct: 435 FTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNT 494
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ YS G+ E A V+ + AG+TPD ++ A G +++ M
Sbjct: 495 LISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGR 554
Query: 341 LEPSDKCVALILSA 354
+P++ +L A
Sbjct: 555 CKPNELTYCSLLHA 568
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 96/238 (40%), Gaps = 2/238 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I + ++ +G+ MKR GF+ ++ T ++ YS+ G+ + A +
Sbjct: 453 DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVY 512
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ G D +Y +++ A R GM ++ E +L EM+ Y +LL Y+ N
Sbjct: 513 RRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYA-N 571
Query: 289 GNSEGAQRVFEAIQFAG-ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G G ++G I P A + L+ +A AF +++ G P
Sbjct: 572 GKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITT 631
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ ++S + + +A L ++ GF +L R + E +LRE
Sbjct: 632 LNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILRE 689
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 73/172 (42%), Gaps = 2/172 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQ-VTLTVMVVMYSKAGNLKMAEETFEEI 231
Y ++H Y +I ++L G I + V L +V++ SK L AE F E+
Sbjct: 562 YCSLLHAYANGKEI-GLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSEL 620
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
K G D + SMV Y R M+ + +L M + Y +L+ +S + +
Sbjct: 621 KERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADF 680
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
++ + I GI PD +I AY + + A F MR +G+ P
Sbjct: 681 GKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVP 732
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 43/235 (18%), Positives = 92/235 (39%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
NI + I YG + + + G D VT ++ ++ + G F
Sbjct: 418 NICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVF 477
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+K G ++ ++ +++ AY R G ++ + R M V Y +L +
Sbjct: 478 KEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARG 537
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G E +++V ++ P+ L++AY + ++ + + +EP +
Sbjct: 538 GMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLL 597
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
++ C K + L A +L+ GF ++ + + R +V + VL
Sbjct: 598 KTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVL 652
>gi|15221893|ref|NP_173324.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42571539|ref|NP_973860.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75151479|sp|Q8GYP6.1|PPR49_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18900
gi|26450017|dbj|BAC42129.1| unknown protein [Arabidopsis thaliana]
gi|28827402|gb|AAO50545.1| unknown protein [Arabidopsis thaliana]
gi|332191657|gb|AEE29778.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332191658|gb|AEE29779.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 860
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ II+ GK + A M +G + VT +M+ +++KA N + A + + +++
Sbjct: 472 YSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQ 531
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G DK +Y ++ G L+ E + EM + VY L+ + GN E
Sbjct: 532 NAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVE 591
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + ++A+ AG+ P+ C L++ + + +AY QNM GL PS + L+L
Sbjct: 592 KAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Query: 353 SAC 355
S C
Sbjct: 652 SCC 654
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 113/259 (43%), Gaps = 6/259 (2%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + + N Y ++IH YG+ + A N M+ G D+VT ++ +++KAG
Sbjct: 390 MVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGF 449
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L +A + ++ ++ G D +Y ++ +AG L L EM Q Y
Sbjct: 450 LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNI 509
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ ++ N + A +++ +Q AG PD ++++ G ++A F M++
Sbjct: 510 MMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKN 569
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
P + L++ K + +A ++ + G +L + F R+ + E
Sbjct: 570 WIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAY 629
Query: 401 HVLRE---YGLR---ETYS 413
+L+ GLR +TY+
Sbjct: 630 ELLQNMLALGLRPSLQTYT 648
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/236 (19%), Positives = 100/236 (42%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+ F+ + YT ++ G+ Q L M R G + VT ++ Y +A L
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A F +++ G D+ +Y +++ + +AG LD + + M A + + Y ++
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G+ A ++F + G TP+ ++++ + A Q A +++M+ AG E
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
P ++++ L A ++++ ++ + L + + G VE+
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEK 592
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 100/249 (40%), Gaps = 9/249 (3%)
Query: 158 ELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR-GFICDQVTLTVMVVMYS 216
L L ++++AN K ++ YG NA +KR+ GF D T T MV
Sbjct: 324 NLGLRIDAYQAN--QVLKQMNDYG------NALGFFYWLKRQPGFKHDGHTYTTMVGNLG 375
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
+A + +E+ G + +Y ++ +Y RA L+ + +M
Sbjct: 376 RAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRV 435
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
Y L+ ++ G + A +++ +Q G++PD +++IN AG A+ F M
Sbjct: 436 TYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEM 495
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVV 396
G P+ +++ K AL+ D++ GF K + G +
Sbjct: 496 VDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 555
Query: 397 EEVEHVLRE 405
EE E V E
Sbjct: 556 EEAEAVFTE 564
>gi|125562063|gb|EAZ07511.1| hypothetical protein OsI_29767 [Oryza sativa Indica Group]
Length = 567
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 103/206 (50%), Gaps = 17/206 (8%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
A++ + +I GY K ++++A+ M RR + V+ + MV Y+ AG L +A E
Sbjct: 160 ADVVSWNTVIGGYVKCGEMESAKRVFDEMPRR----NGVSWSTMVGGYAAAGELDVAREM 215
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
F+ + +G + ++ SMV + R G+L + EM + + + A+LRGYS+
Sbjct: 216 FDRMPAIGR--NVVTWNSMVTGFARHGLLPLARKMFDEMPVRNLV----SWNAMLRGYSV 269
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR-KAGLEPSDK 346
N + +GA+ +F+ + D +I+ Y AG+ Q F+ M+ ++ ++P++
Sbjct: 270 NSDMDGARELFDVMP----EKDVVSWTCMISGYAQAGRYQDTLELFRAMQTESNVQPNEV 325
Query: 347 CVALILSACEKENQL--NRALEFLID 370
+ +LSAC L R + ID
Sbjct: 326 TMVSVLSACANLTALEEGRWVHAFID 351
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 107/251 (42%), Gaps = 32/251 (12%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ + ++ GY + A M + D V+ T M+ Y++AG + E F
Sbjct: 256 NLVSWNAMLRGYSVNSDMDGARELFDVMPEK----DVVSWTCMISGYAQAGRYQDTLELF 311
Query: 229 EEIKLLG--EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE--VYKALLRG 284
++ +P ++ + S++ A L+ G + +D ++ + +E + AL+
Sbjct: 312 RAMQTESNVQP-NEVTMVSVLSACANLTALEEGRWVHAFIDKHKMVLNNEYNLGAALIDM 370
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
Y+ G ++ A ++F ++ ++ LI M G +Q + AF+ M++ G +P+
Sbjct: 371 YAKCGRTDIAVKIFNSLDRKNVSA----WNALITRLAMNGNAQDSVDAFEQMKRTGEKPN 426
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFK----------RLG 394
D +L+AC L+D R F ++C + K R G
Sbjct: 427 DITFVGVLTACSHGG--------LVDEGRRCFQ-SMASTCGVQPEVKHYGCMVDMLGRAG 477
Query: 395 VVEEVEHVLRE 405
++EE E ++R
Sbjct: 478 LLEEAEELIRS 488
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 7/176 (3%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ + +I Q++ + MKR G + +T ++ S G + F
Sbjct: 391 NVSAWNALITRLAMNGNAQDSVDAFEQMKRTGEKPNDITFVGVLTACSHGGLVDEGRRCF 450
Query: 229 EEI-KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMD-AQEVYVGSEVYKALLRGYS 286
+ + G + + YG MV RAG+L+ E L+R M A +V V+ ALL
Sbjct: 451 QSMASTCGVQPEVKHYGCMVDMLGRAGLLEEAEELIRSMPMAPDVM----VFGALLGACR 506
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLI-NAYQMAGQSQKAYTAFQNMRKAGL 341
M+ + A+RV I + C +LI + Y AG+ A Q ++++G+
Sbjct: 507 MHKRFDVAERVQSEIHSLNLNAQQSGCHVLISDIYAAAGKWFDVLEARQVVQRSGI 562
>gi|356517404|ref|XP_003527377.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 696
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 91/190 (47%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
II G+ K A L + G TL +++ +G AE FEEI+ G
Sbjct: 263 IILGFSKAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENG 322
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
R+Y +++ YV+ G L E ++ EM+ V + Y L+ Y+ G E A+
Sbjct: 323 SEPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDAYAHAGRWESAR 382
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
V + ++ + + P++ + + ++ +Y+ G+ QK++ ++M+ G++P +++
Sbjct: 383 IVLKEMEASNVEPNSYVYSRILASYRDKGEWQKSFQVLKDMKSNGVQPDRHFYNVMIDTF 442
Query: 356 EKENQLNRAL 365
K N L+ A+
Sbjct: 443 GKYNCLDHAM 452
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 76/172 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I +GK + +A T M G D VT ++ + K+G MAEE F E++
Sbjct: 435 YNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLINCHCKSGRHNMAEELFGEMQ 494
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G +Y M+ + ++ + L +M +Q + S Y L+ Y +G
Sbjct: 495 QRGYSPCITTYNIMINSMGEQQRWEQVSLFLSKMQSQGLLPNSITYTTLVDVYGKSGRFS 554
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A E ++ G P + M LINAY G S+ A AF+ M GL PS
Sbjct: 555 DAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPS 606
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 88/201 (43%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
+I G + AE ++ G ++ Y K G+LK AE E++ G
Sbjct: 298 VILALGNSGRTHEAEALFEEIRENGSEPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKAG 357
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
D+++Y ++ AY AG + ++L+EM+A V S VY +L Y G + +
Sbjct: 358 VKPDEQTYSLLIDAYAHAGRWESARIVLKEMEASNVEPNSYVYSRILASYRDKGEWQKSF 417
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
+V + ++ G+ PD ++I+ + A F+ M G+ P +++
Sbjct: 418 QVLKDMKSNGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLINCH 477
Query: 356 EKENQLNRALEFLIDLERDGF 376
K + N A E ++++ G+
Sbjct: 478 CKSGRHNMAEELFGEMQQRGY 498
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 105/252 (41%), Gaps = 3/252 (1%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E E R Y ++ GY K +++AE + M++ G D+ T ++++ Y+ AG +
Sbjct: 320 ENGSEPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDAYAHAGRWE 379
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A +E++ + Y ++ +Y G + +L++M + V Y ++
Sbjct: 380 SARIVLKEMEASNVEPNSYVYSRILASYRDKGEWQKSFQVLKDMKSNGVQPDRHFYNVMI 439
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
+ + A FE + GI PD LIN + +G+ A F M++ G
Sbjct: 440 DTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLINCHCKSGRHNMAEELFGEMQQRGYS 499
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE---EV 399
P +++++ ++ + + FL ++ G + TL + + G E
Sbjct: 500 PCITTYNIMINSMGEQQRWEQVSLFLSKMQSQGLLPNSITYTTLVDVYGKSGRFSDAIEC 559
Query: 400 EHVLREYGLRET 411
VL+ G + T
Sbjct: 560 LEVLKSTGFKPT 571
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 81/165 (49%)
Query: 211 MVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE 270
+++ +SKAG+ A + G + ++++A +G E L E+
Sbjct: 263 IILGFSKAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENG 322
Query: 271 VYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAY 330
+ Y ALL+GY G+ + A+ V ++ AG+ PD + +LLI+AY AG+ + A
Sbjct: 323 SEPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDAYAHAGRWESAR 382
Query: 331 TAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+ M + +EP+ + IL++ + + ++ + L D++ +G
Sbjct: 383 IVLKEMEASNVEPNSYVYSRILASYRDKGEWQKSFQVLKDMKSNG 427
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 78/185 (42%)
Query: 170 IRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFE 229
I Y +I+ G++ + + L M+ +G + + +T T +V +Y K+G A E E
Sbjct: 502 ITTYNIMINSMGEQQRWEQVSLFLSKMQSQGLLPNSITYTTLVDVYGKSGRFSDAIECLE 561
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
+K G Y +++ AY + G+ + R M + + +L+ + +
Sbjct: 562 VLKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDR 621
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
A V + ++ I PD L+ A + QK ++ M +G P K A
Sbjct: 622 RDAEAFAVLQYMKENNIEPDVVTYTTLMKALIRVEKFQKVPAVYEEMVTSGCTPDRKARA 681
Query: 350 LILSA 354
++ SA
Sbjct: 682 MLRSA 686
>gi|297835856|ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331650|gb|EFH62069.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 536
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 94/201 (46%), Gaps = 1/201 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+ + + +I G + + A L M G + D VT ++ + K+ LK A E F
Sbjct: 205 DTKTFNILIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMF 264
Query: 229 EEIKLL-GEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
+++K G D +Y SM+ Y +AG + VLL +M +Y + + L+ GY+
Sbjct: 265 DDVKSSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAK 324
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G A+ + + G PD LI+ Y GQ + + ++ M G+ P+
Sbjct: 325 AGEMHTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFT 384
Query: 348 VALILSACEKENQLNRALEFL 368
+++++A KEN+L +A E L
Sbjct: 385 YSILINALCKENRLLKARELL 405
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 101/240 (42%), Gaps = 12/240 (5%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ YT +I GY K ++Q A L M R G VT V+V Y+KAG + AEE
Sbjct: 276 DVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIR 335
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ G D ++ S++ Y R G +++G L EM+A+ ++ + Y L+
Sbjct: 336 GKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINALCKE 395
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC- 347
A+ + + I P M +I+ + AG+ +A + M K +P DK
Sbjct: 396 NRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKP-DKIT 454
Query: 348 -VALILSACEKENQLNRALEF----LIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
LI+ C K F I D V SC L A G+ +E H+
Sbjct: 455 FTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKA-----GMAKEAYHL 509
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 90/206 (43%), Gaps = 1/206 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRR-GFICDQVTLTVMVVMYSKAGNLKMAEET 227
+I Y +I G+ K +++ A +K G D VT T M+ Y KAG ++ A
Sbjct: 240 DIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSPDVVTYTSMISGYCKAGKMQEASVL 299
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
+++ LG ++ +V Y +AG + E + +M + + + +L+ GY
Sbjct: 300 LDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMISFGCFPDVVTFTSLIDGYCR 359
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G R++E + G+ P+A ++LINA + KA + + P
Sbjct: 360 VGQVNQGFRLWEEMNARGMFPNAFTYSILINALCKENRLLKARELLGQLASKDIIPQPFM 419
Query: 348 VALILSACEKENQLNRALEFLIDLER 373
++ K ++N A+ + ++E+
Sbjct: 420 YNPVIDGFCKAGKVNEAIVIVEEMEK 445
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I G+ K+ + A + M +G + T +++ Y KA + E F ++
Sbjct: 469 YTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMS 528
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
L G D +Y +++ + G L+ + L +EM +++V YK LL G NG SE
Sbjct: 529 LRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESE 588
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +FE I+ + + D + ++I+ A + A+ F ++ G++P K +++
Sbjct: 589 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMI 648
Query: 353 SACEKENQLNRALEFLIDLERDG 375
K+ L+ A +E DG
Sbjct: 649 GGLCKKGPLSEAELLFRKMEEDG 671
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 109/245 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ N+ ++ +I + K+ +++ AE M RG D +T T ++ + K +
Sbjct: 422 MIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENH 481
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A + + + G + R++ ++ Y +A +D G L R+M + V + Y
Sbjct: 482 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 541
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L++G+ G A+ +F+ + + P+ +L++ G+S+KA F+ + K+
Sbjct: 542 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 601
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+E +I+ ++++ A + L G G + + + G + E E
Sbjct: 602 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 661
Query: 401 HVLRE 405
+ R+
Sbjct: 662 LLFRK 666
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/224 (19%), Positives = 102/224 (45%), Gaps = 1/224 (0%)
Query: 155 QVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
Q+ +L ++ + + NIR + +I+GY K +I + M RG + D VT ++
Sbjct: 487 QMVDL-MVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQG 545
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
+ + G L +A+E F+E+ P + +Y ++ G ++ + +++ ++ +
Sbjct: 546 FCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELD 605
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+Y ++ G + A +F ++ G+ P + ++I G +A F+
Sbjct: 606 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFR 665
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMV 378
M + G P +++ A + ++++ + +L+R GF V
Sbjct: 666 KMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSV 709
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 104/255 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E + N Y +++ K Q A L M+ R D V ++++ K G+
Sbjct: 317 MVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 376
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A F E+++ G + +Y ++ + AG D G LLR+M +++ +
Sbjct: 377 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 436
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ + G A+ + + + GI PD LI+ + KA M G
Sbjct: 437 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 496
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+P+ + ++++ K N+++ LE + G + TL F LG + +
Sbjct: 497 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 556
Query: 401 HVLREYGLRETYSKI 415
+ +E R+ I
Sbjct: 557 ELFQEMVSRKVPPNI 571
>gi|357462685|ref|XP_003601624.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490672|gb|AES71875.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 684
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 4/196 (2%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I YGK ++ A N + M+ RG + +T + ++ ++ KAG L A F
Sbjct: 405 NVVTYNTMISIYGKSLEHDKATNLIQEMQSRGIQPNAITYSTIISIWEKAGKLDRAAMLF 464
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+++ G +D+ Y +M++AY +AG++ + LL E+ + L R
Sbjct: 465 HKLRTSGVKIDEILYQTMIVAYQKAGLVAHAKRLLNELKQPDNVSRETAITILARA---- 520
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A VF AG D + +I+ + + F+ MR+ G P +
Sbjct: 521 GKVDEAMWVFRQAFDAGEVKDISVFGCIIDIFSRERKYAHVVEVFEKMREVGHFPDSNVI 580
Query: 349 ALILSACEKENQLNRA 364
AL+L+A K + RA
Sbjct: 581 ALVLNAFGKLRKFERA 596
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 92/230 (40%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
+I YGK + A L M+ G + + ++ +Y A F E+ +
Sbjct: 272 MISVYGKAKLFREARLLLQEMRDNGVNPSTASYSTLLAIYVDNQKFVEAVSLFSEMNEVE 331
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
P+D + M+ Y + M+ + M + Y +LR Y G A
Sbjct: 332 CPIDLTTCNIMIDVYGQLQMIKEADCFFWGMRKMGIEPNVVSYNTVLRVYGEAGLFGEAV 391
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
+F +Q G+ + +I+ Y + + KA Q M+ G++P+ + I+S
Sbjct: 392 HLFSLMQMKGVPQNVVTYNTMISIYGKSLEHDKATNLIQEMQSRGIQPNAITYSTIISIW 451
Query: 356 EKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
EK +L+RA L G + + T+ +++ G+V + +L E
Sbjct: 452 EKAGKLDRAAMLFHKLRTSGVKIDEILYQTMIVAYQKAGLVAHAKRLLNE 501
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 123/293 (41%), Gaps = 57/293 (19%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRD 172
V+P T + S LLA +V K A +++ ++ +E P+ L +
Sbjct: 297 VNPSTASYSTLLAIYVDNQKFVEA--VSLFSEMNEVECPIDLTTCNI------------- 341
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+I YG+ I+ A+ M++ G + V+ ++ +Y +AG A F ++
Sbjct: 342 ---MIDVYGQLQMIKEADCFFWGMRKMGIEPNVVSYNTVLRVYGEAGLFGEAVHLFSLMQ 398
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ G P + +Y +M+ Y ++ D+ L++EM ++
Sbjct: 399 MKGVPQNVVTYNTMISIYGKSLEHDKATNLIQEMQSR----------------------- 435
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
GI P+A + +I+ ++ AG+ +A F +R +G++ + ++
Sbjct: 436 ------------GIQPNAITYSTIISIWEKAGKLDRAAMLFHKLRTSGVKIDEILYQTMI 483
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
A +K + A L +L++ V +E + T+ A R G V+E V R+
Sbjct: 484 VAYQKAGLVAHAKRLLNELKQPD-NVSRETAITILA---RAGKVDEAMWVFRQ 532
>gi|77556780|gb|ABA99576.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 696
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 108/255 (42%), Gaps = 1/255 (0%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
+++ Y +I + K + AE + M+ +GF+ + VT ++ YSK GN+ A+
Sbjct: 431 SSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVV 490
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
+ + G D ++ S++ LD V EM V ++ Y L+
Sbjct: 491 LKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCS 550
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G+ A + ++ G+TPDA LI ++ + KA F +M + G+ P
Sbjct: 551 AGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDKAEDIFNDMVRFGVVPDSYT 610
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASC-TLAAWFKRLGVVEEVEHVLREY 406
++ A E ++N+A E L ER G S + A ++G E ++ +Y
Sbjct: 611 YNSLIKALCDERRVNKAKEILFARERSGCSTSNNQSYWPIVAALAKMGQFSEAGELMDKY 670
Query: 407 GLRETYSKIPGSRSI 421
R S ++SI
Sbjct: 671 LSRNAQSSCGSNQSI 685
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 80/186 (43%)
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
N A + L G SY ++ +V+AG +D+ E +++EM + +
Sbjct: 413 NFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFN 472
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ GYS GN A+ V + + G PD LI+ Q A+ F+ M +
Sbjct: 473 TLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEW 532
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEV 399
G+ P+ + +++ +N+A++ L ++ DG + L F R+ V++
Sbjct: 533 GVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDKA 592
Query: 400 EHVLRE 405
E + +
Sbjct: 593 EDIFND 598
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 73/154 (47%), Gaps = 2/154 (1%)
Query: 194 LAMKRRGFICD--QVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYV 251
L + RG C+ + + +V + + G + A E F ++ LG Y +++ A V
Sbjct: 140 LVAEVRGCGCEVSEELVCALVESWGRLGLARYAHEVFVQMPRLGLRPSTAVYNALIAASV 199
Query: 252 RAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDAR 311
RAG +D + ++M A Y +L+ G G + A R+ ++ GI P+
Sbjct: 200 RAGAVDTAYLRFQQMPADGCRPDHFTYNSLVHGVCRRGIVDEAVRLVRQMEGEGIRPNVF 259
Query: 312 MCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
+L++ + AG+ ++A+ M++ G+ PS+
Sbjct: 260 TYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSE 293
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 88/218 (40%), Gaps = 9/218 (4%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
++ +G+ + A + M R G ++ +AG + A F+++ G
Sbjct: 159 LVESWGRLGLARYAHEVFVQMPRLGLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADG 218
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
D +Y S+V R G++D L+R+M+ + + Y L+ G+ G E A
Sbjct: 219 CRPDHFTYNSLVHGVCRRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAF 278
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM--RKAGLEPSDKCVALILS 353
R+ + ++ G+ P L++ + KAY + + L PS +L
Sbjct: 279 RMLDKMKEKGVAPSEATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLHPS--ACHTMLY 336
Query: 354 ACEKENQLNRALEFLIDLERDGFMVGKEA-----SCTL 386
K++ A+EF + G+++ A SC L
Sbjct: 337 CLSKKDMAKEAVEFEKRMSARGYLLDSTAFGIVMSCAL 374
>gi|384253088|gb|EIE26563.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
Length = 908
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 98/204 (48%), Gaps = 3/204 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +++ + + Q AE M + G D +++ ++ +++ GN A E F E++
Sbjct: 303 YNALLNLHARSRQASAAEAVYQGMLQNGPKPDSISVNTLIAAHAEVGNADAAFERFREMQ 362
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+G +K +YGS++ + G +++ M + E Y +L+ G +
Sbjct: 363 GMGLSTNKSTYGSLLHCCAQVGNHKSAARVMQMMRYAGIQPTVEAYTSLMDACVKTGTPD 422
Query: 293 G---AQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
A +VFE +Q G+ P A L+ A + G ++A+ ++ + G+ P+D+C
Sbjct: 423 SLSQAFQVFEEMQQEGVEPTAVTYGCLLVACEQLGDVERAFQLYKQACERGIVPTDECHN 482
Query: 350 LILSACEKENQLNRALEFLIDLER 373
++++ C +++ ALE + +L R
Sbjct: 483 ILINVCAATGRVDEALELVKELAR 506
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 97/231 (41%), Gaps = 15/231 (6%)
Query: 178 HGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEP 237
H G++ +Q+ ++ L+A ++ +++++ AE ++ + G
Sbjct: 285 HNQGQRSNLQHKQDWLVA------------YNALLNLHARSRQASAAEAVYQGMLQNGPK 332
Query: 238 LDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRV 297
D S +++ A+ G D REM + Y +LL + GN + A RV
Sbjct: 333 PDSISVNTLIAAHAEVGNADAAFERFREMQGMGLSTNKSTYGSLLHCCAQVGNHKSAARV 392
Query: 298 FEAIQFAGITPDARMCALLINAYQMAGQS---QKAYTAFQNMRKAGLEPSDKCVALILSA 354
+ +++AGI P L++A G +A+ F+ M++ G+EP+ +L A
Sbjct: 393 MQMMRYAGIQPTVEAYTSLMDACVKTGTPDSLSQAFQVFEEMQQEGVEPTAVTYGCLLVA 452
Query: 355 CEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
CE+ + RA + G + E L G V+E +++E
Sbjct: 453 CEQLGDVERAFQLYKQACERGIVPTDECHNILINVCAATGRVDEALELVKE 503
>gi|255661212|gb|ACU25775.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 426
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 105/218 (48%), Gaps = 4/218 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M RG + +T + ++ ++ K G L
Sbjct: 213 KNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDR 272
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D Y +M++AY RAG++ + LL E+ + + + +L
Sbjct: 273 AAMLFQKLRSSGVEIDHVLYQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDTAIHILA 331
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +++ + + F+ MR G P
Sbjct: 332 G---AGRIEEATWVFRQAIDAGEVKDITVFERMVDLFSKYKKYPNVVEVFEKMRGLGYFP 388
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKE 381
+AL+L+A K ++ ++A + ++++ +G + E
Sbjct: 389 DSNVIALVLNAYGKLHEFDKANDVYLEMQDEGCVFSDE 426
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 97/236 (41%), Gaps = 6/236 (2%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+ +GK + A + + M+ G + D V+ + ++ MY + A F E++
Sbjct: 82 YNSMINVFGKAKLFREARSLISEMRMVGVVPDTVSYSTLLTMYVENQKFLEALSVFAEMR 141
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ LD + M+ Y + M + L M + Y LLR Y G++E
Sbjct: 142 EIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKMGIEPNVVSYNTLLRVY---GDAE 198
Query: 293 ---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
A +F +Q I + ++ Y + +KA Q M G+EP+ +
Sbjct: 199 LFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHSRGIEPNAITYS 258
Query: 350 LILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
I+S K +L+RA L G + T+ ++R G+V + +L E
Sbjct: 259 TIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQTMIVAYERAGLVAHAKRLLHE 314
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 97/233 (41%), Gaps = 4/233 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ ++ Y + + A + M+ + D T +M+ +Y + K A++ F ++
Sbjct: 117 YSTLLTMYVENQKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWSMR 176
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+G + SY +++ Y A + L R M + + Y ++ Y E
Sbjct: 177 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHE 236
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + + GI P+A + +I+ + G+ +A FQ +R +G+E ++
Sbjct: 237 KANNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQTMI 296
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
A E+ + A L +L+R + A LA G +EE V R+
Sbjct: 297 VAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAG----AGRIEEATWVFRQ 345
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ +A + L M++ D V + ++ + K + A F +K
Sbjct: 12 YSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLYDYSKAISIFSRLK 71
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y SM+ + +A + L+ EM V + Y LL Y N
Sbjct: 72 RSGIVPDLVAYNSMINVFGKAKLFREARSLISEMRMVGVVPDTVSYSTLLTMYVENQKFL 131
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF ++ D C ++I+ Y +++A F +MRK G+EP+
Sbjct: 132 EALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKMGIEPN 183
>gi|125537003|gb|EAY83491.1| hypothetical protein OsI_38705 [Oryza sativa Indica Group]
Length = 696
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 108/255 (42%), Gaps = 1/255 (0%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
+++ Y +I + K + AE + M+ +GF+ + VT ++ YSK GN+ A+
Sbjct: 431 SSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVV 490
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
+ + G D ++ S++ LD V EM V ++ Y L+
Sbjct: 491 LKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCS 550
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G+ A + ++ G+TPDA LI ++ + KA F +M + G+ P
Sbjct: 551 AGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDKAEDIFNDMVRFGVVPDSYT 610
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASC-TLAAWFKRLGVVEEVEHVLREY 406
++ A E ++N+A E L ER G S + A ++G E ++ +Y
Sbjct: 611 YNSLIKALCDERRVNKAKEILFARERSGCSTSNNQSYWPIVAALAKMGQFSEAGELMDKY 670
Query: 407 GLRETYSKIPGSRSI 421
R S ++SI
Sbjct: 671 LSRNAQSSCGSNQSI 685
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 80/186 (43%)
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
N A + L G SY ++ +V+AG +D+ E +++EM + +
Sbjct: 413 NFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFN 472
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ GYS GN A+ V + + G PD LI+ Q A+ F+ M +
Sbjct: 473 TLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEW 532
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEV 399
G+ P+ + +++ +N+A++ L ++ DG + L F R+ V++
Sbjct: 533 GVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDKA 592
Query: 400 EHVLRE 405
E + +
Sbjct: 593 EDIFND 598
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 73/154 (47%), Gaps = 2/154 (1%)
Query: 194 LAMKRRGFICD--QVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYV 251
L + RG C+ + + +V + + G + A E F ++ LG Y +++ A V
Sbjct: 140 LVAEVRGCGCEVSEELVCALVESWGRLGLARYAHEVFVQMPRLGLRPSTAVYNALIAASV 199
Query: 252 RAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDAR 311
RAG +D + ++M A Y +L+ G G + A R+ ++ GI P+
Sbjct: 200 RAGAVDTAYLRFQQMPADGCRPDRFTYNSLVHGVCRRGIVDEAVRLVRQMEGEGIRPNVF 259
Query: 312 MCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
+L++ + AG+ ++A+ M++ G+ PS+
Sbjct: 260 TYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSE 293
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 90/218 (41%), Gaps = 9/218 (4%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
++ +G+ + A + M R G ++ +AG + A F+++ G
Sbjct: 159 LVESWGRLGLARYAHEVFVQMPRLGLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADG 218
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
D+ +Y S+V R G++D L+R+M+ + + Y L+ G+ G E A
Sbjct: 219 CRPDRFTYNSLVHGVCRRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAF 278
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM--RKAGLEPSDKCVALILS 353
R+ + ++ G+ P L++ + KAY + + L PS +L
Sbjct: 279 RMLDKMKEKGVAPSEATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLHPS--ACHTMLY 336
Query: 354 ACEKENQLNRALEFLIDLERDGFMVGKEA-----SCTL 386
K++ A+EF + G+++ A SC+L
Sbjct: 337 CLSKKDMAKEAVEFAKRMSARGYLLDSTAFGIVMSCSL 374
>gi|449477323|ref|XP_004154991.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g18900-like [Cucumis sativus]
Length = 874
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 96/204 (47%), Gaps = 5/204 (2%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
+Y ++ + L ++F Y+ +I+ GK + A M G + + VT +M
Sbjct: 471 MYEKMQDAGLTPDTFT-----YSVMINCLGKAGHLNAAHRLFCRMVDEGCVPNLVTYNIM 525
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ + +KA N ++A + + +++ G DK +Y ++ G L+ E + EM +
Sbjct: 526 IALQAKARNYEIALKLYRDMQQSGFEPDKVTYCIVMEVLGHCGFLEEAEGIFIEMQKKNW 585
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
VY L+ + +GN + A + A+ AG+ P+ C L++A+ Q AY
Sbjct: 586 VPDEPVYGLLVDLWGKSGNVQKAWEWYHAMLKAGLKPNVPTCNSLLSAFLRVHQLSDAYQ 645
Query: 332 AFQNMRKAGLEPSDKCVALILSAC 355
Q+M GL+PS + L+LS C
Sbjct: 646 LLQSMLTFGLKPSLQTYTLLLSCC 669
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 107/243 (44%), Gaps = 35/243 (14%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++++ + N+ Y +IIH YG+ +Q+A N M+ G D+VT ++ +++K+G
Sbjct: 405 MIKDGCQPNVVTYNRIIHSYGRANYLQDAVNVFKQMQEAGCEPDRVTYCTLIDIHAKSGF 464
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG-----------MLDRGEV-------- 261
L +A +E+++ G D +Y M+ +AG M+D G V
Sbjct: 465 LDVAMGMYEKMQDAGLTPDTFTYSVMINCLGKAGHLNAAHRLFCRMVDEGCVPNLVTYNI 524
Query: 262 ----------------LLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAG 305
L R+M Y ++ G E A+ +F +Q
Sbjct: 525 MIALQAKARNYEIALKLYRDMQQSGFEPDKVTYCIVMEVLGHCGFLEEAEGIFIEMQKKN 584
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
PD + LL++ + +G QKA+ + M KAGL+P+ +LSA + +QL+ A
Sbjct: 585 WVPDEPVYGLLVDLWGKSGNVQKAWEWYHAMLKAGLKPNVPTCNSLLSAFLRVHQLSDAY 644
Query: 366 EFL 368
+ L
Sbjct: 645 QLL 647
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 86/205 (41%)
Query: 201 FICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGE 260
F D T T M+ + +A + +++ G + +Y ++ +Y RA L
Sbjct: 375 FRHDGHTYTTMIGLLGRAKQFAAINKLLDQMIKDGCQPNVVTYNRIIHSYGRANYLQDAV 434
Query: 261 VLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAY 320
+ ++M Y L+ ++ +G + A ++E +Q AG+TPD +++IN
Sbjct: 435 NVFKQMQEAGCEPDRVTYCTLIDIHAKSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCL 494
Query: 321 QMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGK 380
AG A+ F M G P+ ++++ K AL+ D+++ GF K
Sbjct: 495 GKAGHLNAAHRLFCRMVDEGCVPNLVTYNIMIALQAKARNYEIALKLYRDMQQSGFEPDK 554
Query: 381 EASCTLAAWFKRLGVVEEVEHVLRE 405
C + G +EE E + E
Sbjct: 555 VTYCIVMEVLGHCGFLEEAEGIFIE 579
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 110/241 (45%), Gaps = 1/241 (0%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
E N+ Y ++ Y ++A L +++R+G + VT T++V Y K G ++ AE
Sbjct: 249 LEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAE 308
Query: 226 ETFEEIKLLGE-PLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
+E+K G+ +D+ +YG M+ Y + G +D + EM ++V VY ++ G
Sbjct: 309 RVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMING 368
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
G E Q+V + ++ G+ PD LI+ Y G +KA+ + M + GL +
Sbjct: 369 LCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAAT 428
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
+L + ++ AL + + G + + TL + G E+ ++ +
Sbjct: 429 TLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWK 488
Query: 405 E 405
E
Sbjct: 489 E 489
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 122/273 (44%), Gaps = 4/273 (1%)
Query: 134 RRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTL 193
R D A+L L PL+ +AE+ F + + ++ + Q+ +A N
Sbjct: 115 RFHDARALLSSLPPHAEPLFPHLAEVY---RDFTFSAVSFDLLLRAHADAGQLSSALNVF 171
Query: 194 LAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRA 253
M + G + ++ ++G+ MA + ++++ G D+ + M AY R
Sbjct: 172 DGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRD 231
Query: 254 GMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
G + + + EM+ + V Y A++ Y G +E A+R+ E++Q G++P+
Sbjct: 232 GRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTY 291
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV-ALILSACEKENQLNRALEFLIDLE 372
LL+ Y G+ ++A + M++ G D+ ++++ + +++ A ++
Sbjct: 292 TLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMR 351
Query: 373 RDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
G V T+ +LG +EEV+ VL+E
Sbjct: 352 DAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQE 384
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 93/245 (37%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ A Y ++ G+ I +A M +RG ++++ + ++ KAG
Sbjct: 420 MVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGK 479
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A ++E G + ++ +++ + G + E LL M S Y+
Sbjct: 480 TEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRT 539
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L GY G A + ++ G P M I + +A Q K M G
Sbjct: 540 LFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARG 599
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
L P+ +++ KE L+ A ++ +G L + F + G V+E
Sbjct: 600 LSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEAN 659
Query: 401 HVLRE 405
VL++
Sbjct: 660 LVLQK 664
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 89/205 (43%)
Query: 205 QVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLR 264
V V++ K+G + A+ FE ++ D +Y S++ +G +D L
Sbjct: 700 NVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRD 759
Query: 265 EMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAG 324
M + + Y +L+ G +G A +F +Q GI+P+ LI+ Y G
Sbjct: 760 VMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEG 819
Query: 325 QSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASC 384
++ +A+ Q M + G++P+ ++++ + + A++ L + + C
Sbjct: 820 KTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYC 879
Query: 385 TLAAWFKRLGVVEEVEHVLREYGLR 409
TL + + G +EE+ + E +R
Sbjct: 880 TLIHGYIKSGNMEEISKLYDEMHIR 904
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 89/196 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+GY ++ ++ +A M+ G + M+ K G ++ ++ +E++
Sbjct: 327 YGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEME 386
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+G DK SY +++ Y R G + + + R M + + Y LL+G+ +
Sbjct: 387 DVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAID 446
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A R++ + G+ P+ C+ L++ AG++++A ++ GL + ++
Sbjct: 447 DALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVI 506
Query: 353 SACEKENQLNRALEFL 368
+ K ++ A E L
Sbjct: 507 NGLCKIGRMAEAEELL 522
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 73/182 (40%)
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL 221
L N+ + +I+G K ++ AE L MK D +T + Y K G L
Sbjct: 491 LARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQL 550
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
A +++ LG + S + + A + + EM A+ + Y AL
Sbjct: 551 GTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGAL 610
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+ G+ GN A ++ + G+ P+ +C+ L++ + G+ +A Q + +
Sbjct: 611 IAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDM 670
Query: 342 EP 343
P
Sbjct: 671 IP 672
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 61/156 (39%), Gaps = 16/156 (10%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L NI Y +I+G K ++ A N ++ +G + +T ++ Y K G
Sbjct: 761 MLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGK 820
Query: 221 L--------KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY 272
KM EE + + +Y ++ G ++ LL +M V
Sbjct: 821 TTEAFKLKQKMVEEGIQPTVI--------TYSILIYGLCTQGYMEEAIKLLDQMIENNVD 872
Query: 273 VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITP 308
Y L+ GY +GN E ++++ + G+ P
Sbjct: 873 PNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLP 908
>gi|302782654|ref|XP_002973100.1| hypothetical protein SELMODRAFT_442013 [Selaginella moellendorffii]
gi|300158853|gb|EFJ25474.1| hypothetical protein SELMODRAFT_442013 [Selaginella moellendorffii]
Length = 674
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 142/329 (43%), Gaps = 37/329 (11%)
Query: 82 PNITEEQKQAISQFPRKMTKRCKAF--VKQIICVSPETGNLSDLLAAWVRFMKPRRA--- 136
P T E + PR TK F V +++ + +TGN+ L +W + + +
Sbjct: 57 PEETGESSASAKTIPR-YTKWTPQFARVDEVLKILQKTGNVEAALESWDKSLSAKNIVTV 115
Query: 137 --------------DWLAVLKQL------------KLMEHPLYLQVAELALLEE----SF 166
+WL +L K++ + L+++E L+EE
Sbjct: 116 LNNINRWEKALAFFEWLKARPELYEINRYTYNVMLKILRNGRQLELSE-KLVEEMTGRGI 174
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
+ + ++ +I+ + Q + A MK G + D+VT ++ MY + G + A E
Sbjct: 175 QPDNYTFSTLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVE 234
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
+E++K + LD +YG++ Y RAG L++EM + + L+ S
Sbjct: 235 LYEKLKSVNWKLDTVTYGAIANVYARAGDYQSIIQLVQEMRDSGSSPNAVIMNTLMGTLS 294
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G A++VF ++ +G++P ++L+ Y G +A+ ++ ++ G +
Sbjct: 295 KAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTEGWKCDVA 354
Query: 347 CVALILSACEKENQLNRALEFLIDLERDG 375
++ AC + ++ +A + L +++R G
Sbjct: 355 VYNSLMKACVEGGRVEQAEDILKEMKRAG 383
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 86/174 (49%)
Query: 182 KKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKR 241
K ++ A+ M+ G VTL+++V MY++ G A E +E +K G D
Sbjct: 295 KAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTEGWKCDVA 354
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI 301
Y S++ A V G +++ E +L+EM Y+ + Y+ G + A+R+F+ +
Sbjct: 355 VYNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGMVDPARRMFDKV 414
Query: 302 QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
PD + ++I A ++AG+ ++A F M ++G D+ V+ +L +C
Sbjct: 415 VALNGKPDTPLFTVMIRACKLAGEIEQASKIFDEMMESGCCSPDERVSGMLLSC 468
>gi|449440748|ref|XP_004138146.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Cucumis sativus]
Length = 874
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 96/204 (47%), Gaps = 5/204 (2%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
+Y ++ + L ++F Y+ +I+ GK + A M G + + VT +M
Sbjct: 471 MYEKMQDAGLTPDTFT-----YSVMINCLGKAGHLNAAHRLFCRMVDEGCVPNLVTYNIM 525
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ + +KA N ++A + + +++ G DK +Y ++ G L+ E + EM +
Sbjct: 526 IALQAKARNYEIALKLYRDMQQSGFEPDKVTYCIVMEVLGHCGFLEEAEGIFIEMQKKNW 585
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
VY L+ + +GN + A + A+ AG+ P+ C L++A+ Q AY
Sbjct: 586 VPDEPVYGLLVDLWGKSGNVQKAWEWYHAMLKAGLKPNVPTCNSLLSAFLRVHQLSDAYQ 645
Query: 332 AFQNMRKAGLEPSDKCVALILSAC 355
Q+M GL+PS + L+LS C
Sbjct: 646 LLQSMLTFGLKPSLQTYTLLLSCC 669
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 107/243 (44%), Gaps = 35/243 (14%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++++ + N+ Y +IIH YG+ +Q+A N M+ G D+VT ++ +++K+G
Sbjct: 405 MIKDGCQPNVVTYNRIIHSYGRANYLQDAVNVFKQMQEAGCEPDRVTYCTLIDIHAKSGF 464
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG-----------MLDRGEV-------- 261
L +A +E+++ G D +Y M+ +AG M+D G V
Sbjct: 465 LDVAMGMYEKMQDAGLTPDTFTYSVMINCLGKAGHLNAAHRLFCRMVDEGCVPNLVTYNI 524
Query: 262 ----------------LLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAG 305
L R+M Y ++ G E A+ +F +Q
Sbjct: 525 MIALQAKARNYEIALKLYRDMQQSGFEPDKVTYCIVMEVLGHCGFLEEAEGIFIEMQKKN 584
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
PD + LL++ + +G QKA+ + M KAGL+P+ +LSA + +QL+ A
Sbjct: 585 WVPDEPVYGLLVDLWGKSGNVQKAWEWYHAMLKAGLKPNVPTCNSLLSAFLRVHQLSDAY 644
Query: 366 EFL 368
+ L
Sbjct: 645 QLL 647
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 86/205 (41%)
Query: 201 FICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGE 260
F D T T M+ + +A + +++ G + +Y ++ +Y RA L
Sbjct: 375 FRHDGHTYTTMIGLLGRAKQFAAINKLLDQMIKDGCQPNVVTYNRIIHSYGRANYLQDAV 434
Query: 261 VLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAY 320
+ ++M Y L+ ++ +G + A ++E +Q AG+TPD +++IN
Sbjct: 435 NVFKQMQEAGCEPDRVTYCTLIDIHAKSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCL 494
Query: 321 QMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGK 380
AG A+ F M G P+ ++++ K AL+ D+++ GF K
Sbjct: 495 GKAGHLNAAHRLFCRMVDEGCVPNLVTYNIMIALQAKARNYEIALKLYRDMQQSGFEPDK 554
Query: 381 EASCTLAAWFKRLGVVEEVEHVLRE 405
C + G +EE E + E
Sbjct: 555 VTYCIVMEVLGHCGFLEEAEGIFIE 579
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 103/224 (45%), Gaps = 8/224 (3%)
Query: 153 YLQVAELALLEESFEA--------NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICD 204
YL V E+ + F A ++ YT +I+G+ K + A N M ++ + D
Sbjct: 562 YLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPD 621
Query: 205 QVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLR 264
VT + +V K+G + + +E++ G+P D +Y S++ + G LD+ L
Sbjct: 622 TVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFN 681
Query: 265 EMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAG 324
+M Q + + + LL G G + AQ VF+ + G D + ++I + G
Sbjct: 682 KMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQG 741
Query: 325 QSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFL 368
++A T M + G P+ +I++A K+++ ++A + L
Sbjct: 742 LLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLL 785
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 91/213 (42%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ ++R YT ++ GK+ +++ A++ L M + D T ++ Y +K
Sbjct: 511 KTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKK 570
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A+ F + L+G D +Y ++ + ++ M+D L +EM + + + Y +L+
Sbjct: 571 AQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVD 630
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G +G + + ++ G D LI+ G KA F M+ G+ P
Sbjct: 631 GLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRP 690
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+ ++L K +L A E DL G+
Sbjct: 691 NTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGY 723
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 104/248 (41%), Gaps = 1/248 (0%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ N+ Y ++ K+ +++ A++ L M + + +T + ++ Y +K
Sbjct: 197 KTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKK 256
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A+ F + L+G D SY M+ + + +D+ L +EM + + +L
Sbjct: 257 AQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSR-FPPIIQFNKILD 315
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
++ + A + ++ GI PD +LIN + GQ ++ + K G P
Sbjct: 316 SFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPP 375
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
S + ++ + Q+ +AL F L GF + + + TL ++G +L
Sbjct: 376 STVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLL 435
Query: 404 REYGLRET 411
R+ R T
Sbjct: 436 RKIDGRLT 443
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 70/177 (39%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
+ N+ Y II K + A M +G + VT + ++ + G LK A
Sbjct: 130 KPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALG 189
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
+ L + +Y +V A + G + + +L M V Y L+ GY
Sbjct: 190 LLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYF 249
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
+ + AQ VF A+ G+TPD ++IN + + KA F+ M + P
Sbjct: 250 LVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPP 306
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 83/213 (38%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
LL + F+ N Y +I+G K + A L + R + + ++ K
Sbjct: 403 LLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQL 462
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A F E+ + G D +Y +++ + G L LL EM + + Y
Sbjct: 463 VSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTI 522
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G + A+ V + A + PD L+N Y + + +KA F M G
Sbjct: 523 LVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMG 582
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLER 373
+ P ++++ K ++ AL ++ +
Sbjct: 583 VTPDVHTYTILINGFCKSKMVDEALNLFKEMHQ 615
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 82/190 (43%), Gaps = 2/190 (1%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
+I+ + QI + L + +RG+ VTL ++ G +K A +++ G
Sbjct: 348 LINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 407
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEV-LLREMDAQEVYVGSEVYKALLRGYSMNGNSEGA 294
L++ SY +++ + G RG + LLR++D + E+Y ++ A
Sbjct: 408 FQLNQVSYATLINGVCKIGD-TRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEA 466
Query: 295 QRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSA 354
+F + GI+ D + LI + + G+ ++A M + P + +++ A
Sbjct: 467 YGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDA 526
Query: 355 CEKENQLNRA 364
KE ++ A
Sbjct: 527 LGKEGKVKEA 536
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 77/184 (41%), Gaps = 5/184 (2%)
Query: 186 IQNAEN-----TLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDK 240
IQN ++ L + +RG+ D VTL ++ G +K A +++ G L++
Sbjct: 39 IQNVDDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQ 98
Query: 241 RSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEA 300
SY +++ R G LR++D + E+Y ++ A +F
Sbjct: 99 VSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSE 158
Query: 301 IQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQ 360
+ GI+ + + LI + + G+ ++A M + P+ +++ A KE +
Sbjct: 159 MTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGK 218
Query: 361 LNRA 364
+ A
Sbjct: 219 VKEA 222
>gi|8778269|gb|AAF79278.1|AC068602_1 F14D16.2 [Arabidopsis thaliana]
Length = 977
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ II+ GK + A M +G + VT +M+ +++KA N + A + + +++
Sbjct: 589 YSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQ 648
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G DK +Y ++ G L+ E + EM + VY L+ + GN E
Sbjct: 649 NAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVE 708
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + ++A+ AG+ P+ C L++ + + +AY QNM GL PS + L+L
Sbjct: 709 KAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 768
Query: 353 SAC 355
S C
Sbjct: 769 SCC 771
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 113/259 (43%), Gaps = 6/259 (2%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + + N Y ++IH YG+ + A N M+ G D+VT ++ +++KAG
Sbjct: 507 MVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGF 566
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L +A + ++ ++ G D +Y ++ +AG L L EM Q Y
Sbjct: 567 LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNI 626
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ ++ N + A +++ +Q AG PD ++++ G ++A F M++
Sbjct: 627 MMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKN 686
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
P + L++ K + +A ++ + G +L + F R+ + E
Sbjct: 687 WIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAY 746
Query: 401 HVLRE---YGLR---ETYS 413
+L+ GLR +TY+
Sbjct: 747 ELLQNMLALGLRPSLQTYT 765
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/236 (19%), Positives = 100/236 (42%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+ F+ + YT ++ G+ Q L M R G + VT ++ Y +A L
Sbjct: 474 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 533
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A F +++ G D+ +Y +++ + +AG LD + + M A + + Y ++
Sbjct: 534 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 593
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G+ A ++F + G TP+ ++++ + A Q A +++M+ AG E
Sbjct: 594 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 653
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
P ++++ L A ++++ ++ + L + + G VE+
Sbjct: 654 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEK 709
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 100/249 (40%), Gaps = 9/249 (3%)
Query: 158 ELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR-GFICDQVTLTVMVVMYS 216
L L ++++AN K ++ YG NA +KR+ GF D T T MV
Sbjct: 441 NLGLRIDAYQAN--QVLKQMNDYG------NALGFFYWLKRQPGFKHDGHTYTTMVGNLG 492
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
+A + +E+ G + +Y ++ +Y RA L+ + +M
Sbjct: 493 RAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRV 552
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
Y L+ ++ G + A +++ +Q G++PD +++IN AG A+ F M
Sbjct: 553 TYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEM 612
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVV 396
G P+ +++ K AL+ D++ GF K + G +
Sbjct: 613 VDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 672
Query: 397 EEVEHVLRE 405
EE E V E
Sbjct: 673 EEAEAVFTE 681
>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
Length = 543
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 97/201 (48%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
A+ + E ++ Y + G + ++ A+ L M +G + VT T ++ ++ K G
Sbjct: 332 AMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEG 391
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A F E+ G +Y M+ Y++ G + E +EM+ + + Y
Sbjct: 392 DMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYA 451
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
+L+ G+ +NG + A ++FE ++ G P+ LI+ G+S++A+ + +M KA
Sbjct: 452 SLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDMLKA 511
Query: 340 GLEPSDKCVALILSACEKENQ 360
GL P D + ++ + +N+
Sbjct: 512 GLTPDDSLYSALVGSLHTDNR 532
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 110/272 (40%), Gaps = 13/272 (4%)
Query: 134 RRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTL 193
RR D V + L++ME+ EA + YT ++ I E +
Sbjct: 179 RRKDDARVQELLEIMEN-------------GGIEATVGTYTILVDSLSTAGDISKVEAVV 225
Query: 194 LAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRA 253
MK + D T ++ Y +AGN++ A E F+E G ++R+YG ++ + +
Sbjct: 226 DEMKAKNVAGDVYLYTAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKI 285
Query: 254 GMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
G ++ E+LL +M + V ++ ++ GY G + A +V A++ GI D
Sbjct: 286 GQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTY 345
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
L + +A T M + G+ P+ ++S KE + A ++
Sbjct: 346 NTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAG 405
Query: 374 DGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
G M + + + G + E E +E
Sbjct: 406 KGAMPSVVTYNVMMDGYIKKGSIREAERFRKE 437
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 98/248 (39%), Gaps = 35/248 (14%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
E N R Y +I+G+ K Q++ AE L M+ RG +Q+ M+ Y + G +
Sbjct: 266 NGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDN 325
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAG-----------MLDRG------------- 259
A + ++ +G LD +Y ++ R M+++G
Sbjct: 326 ALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLIS 385
Query: 260 -----------EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITP 308
L REM + Y ++ GY G+ A+R + ++ G+ P
Sbjct: 386 IHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVP 445
Query: 309 DARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFL 368
D A L++ + + G+ A F+ M+ G EP+ ++S KE + A +
Sbjct: 446 DVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQLY 505
Query: 369 IDLERDGF 376
D+ + G
Sbjct: 506 DDMLKAGL 513
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 104/240 (43%), Gaps = 3/240 (1%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
++ G+ K ++ +A L M R G + + ++ Y + + +E E ++ G
Sbjct: 138 VVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMENGG 197
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
+Y +V + AG + + E ++ EM A+ V +Y A++ Y GN A
Sbjct: 198 IEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRAS 257
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
VF+ GI P+ R +LIN + GQ + A +M+ G+ + ++
Sbjct: 258 EVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGY 317
Query: 356 EKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE---HVLREYGLRETY 412
++ ++ AL+ +E+ G + TLA R+ + E + H++ E G+ Y
Sbjct: 318 CRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNY 377
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 84/190 (44%)
Query: 209 TVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
+V+V + K+G + A +E+ G L+ Y S++ YVR R + LL M+
Sbjct: 136 SVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMEN 195
Query: 269 QEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
+ Y L+ S G+ + V + ++ + D + +INAY AG ++
Sbjct: 196 GGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRR 255
Query: 329 AYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAA 388
A F G+EP+++ ++++ K Q+ A L D++ G + T+
Sbjct: 256 ASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMID 315
Query: 389 WFKRLGVVEE 398
+ R G+V+
Sbjct: 316 GYCRQGMVDN 325
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 75/187 (40%), Gaps = 4/187 (2%)
Query: 160 ALLEESFEANIR----DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
ALL+E +R Y ++ Y ++ + L M+ G T T++V
Sbjct: 153 ALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMENGGIEATVGTYTILVDSL 212
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
S AG++ E +E+K D Y +++ AY RAG + R + E +
Sbjct: 213 STAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRASEVFDECVGNGIEPNE 272
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
Y L+ G+ G E A+ + +Q G+ + + +I+ Y G A
Sbjct: 273 RTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAA 332
Query: 336 MRKAGLE 342
M K G+E
Sbjct: 333 MEKMGIE 339
>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 108/243 (44%), Gaps = 4/243 (1%)
Query: 160 ALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
A+ EE F + R Y+ +IHG K +MK +G + D +++ +
Sbjct: 538 AMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGF 597
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
K G + A + EE+K G +YGS++ + LD +L E ++ + +
Sbjct: 598 CKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNV 657
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
+Y +L+ G+ G + A + E + G+TP+ L++A A + +A FQ+
Sbjct: 658 VIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQS 717
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGV 395
M++ P+ ++++ K + N+A F ++++ G + T+ + + G
Sbjct: 718 MKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGN 777
Query: 396 VEE 398
+ E
Sbjct: 778 IAE 780
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 108/252 (42%), Gaps = 8/252 (3%)
Query: 159 LALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
L+LL+E S +A+I Y I +GK ++ A ++ G D+VT T M+ +
Sbjct: 223 LSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGV 282
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
KA L A E FE ++ +Y +M+M Y AG D LL A+
Sbjct: 283 LCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPS 342
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
Y +L G + A RVFE ++ P+ +LI+ AG+ A+
Sbjct: 343 VIAYNCILTCLRKMGKVDEALRVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDCAFELRD 401
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
+M+KAGL P+ + V +++ K +L+ A E+ + V T + LG
Sbjct: 402 SMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAI---FEQMDYKVCTPDEITFCSLIDGLG 458
Query: 395 VVEEVEHVLREY 406
V V+ + Y
Sbjct: 459 KVGRVDDAYKIY 470
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 96/226 (42%), Gaps = 6/226 (2%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
L+ Q+ EL +E + +T +I G+ K+ ++ +A + L MK D V V
Sbjct: 190 LFQQMQELG-----YEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVC 244
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ + K G + MA + F EI+ G D+ +Y SM+ +A LD + ++
Sbjct: 245 IDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRR 304
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
+ Y ++ GY G + A + E + G P ++ + G+ +A
Sbjct: 305 VPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALR 364
Query: 332 AFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
F+ M+K P+ +++ + +L+ A E +++ G
Sbjct: 365 VFEEMKKDA-APNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLF 409
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 92/208 (44%), Gaps = 4/208 (1%)
Query: 161 LLEES----FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS 216
L EE+ E N+ Y+ +I G+GK +I A L + ++G + T ++
Sbjct: 644 LFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALV 703
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
KA + A F+ +K L ++ +YG ++ + ++ V +EM Q + +
Sbjct: 704 KAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTI 763
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
Y ++ G + GN A +F+ + G PD+ +I ++ A++ F+
Sbjct: 764 SYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEET 823
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRA 364
R+ GL +K ++L K + L +A
Sbjct: 824 RRRGLHIHNKTCVVLLDTLHKNDCLEQA 851
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 8/200 (4%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+ R Y +I G+ K ++ A L MK +GF VT ++ +K L A F
Sbjct: 586 DTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLF 645
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQ----EVYVGSEVYKALLRG 284
EE K L+ Y S++ + + G +D ++L E+ + VY + + AL++
Sbjct: 646 EEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKA 705
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
+N A F++++ TP+ +LIN + KA+ +Q M+K G++PS
Sbjct: 706 EEIN----EALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPS 761
Query: 345 DKCVALILSACEKENQLNRA 364
++S K + A
Sbjct: 762 TISYTTMISGLAKAGNIAEA 781
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/237 (17%), Positives = 99/237 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I + ++ A +M++ G + T+ +MV K+ L A F
Sbjct: 376 NLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIF 435
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++ D+ ++ S++ + G +D + +M + S VY +L++ + +
Sbjct: 436 EQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNH 495
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G E ++++ + +PD ++ ++ AG+ +K F+ ++ P +
Sbjct: 496 GRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSY 555
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++++ K N E ++ G ++ A + F + G V + +L E
Sbjct: 556 SILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEE 612
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 89/210 (42%), Gaps = 4/210 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+R ++ K ++ A M + D++T ++ K G + A + +
Sbjct: 411 NVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIY 470
Query: 229 EEIKLLGEPLDKRS--YGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
E K+L S Y S++ + G + G + ++M Q ++ +
Sbjct: 471 E--KMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMF 528
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G E + +FE I+ PDAR ++LI+ AG + + Y F +M++ G +
Sbjct: 529 KAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTR 588
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGF 376
+++ K ++N+A + L +++ GF
Sbjct: 589 AYNIVIDGFCKCGKVNKAYQLLEEMKTKGF 618
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 50/262 (19%), Positives = 104/262 (39%), Gaps = 17/262 (6%)
Query: 131 MKPRRADWLAVLKQLKLMEHPL-----YLQVAELALLEESFEANIRDYTKIIHGYGKKMQ 185
KP+ + VL++LK + + Y + EL ES Y ++ +
Sbjct: 61 FKPQPEFVIGVLRRLKDVNRAIEYFRWYERRTELPHCPES-------YNSLLLVMARCRN 113
Query: 186 IQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGS 245
+ L M GF T MV+ KA L+ + + ++ +Y +
Sbjct: 114 FDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTT 173
Query: 246 MVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAG 305
++ A+ D L ++M ++ L+RG++ G + A + + ++ +
Sbjct: 174 LIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSS 233
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
+ D + + I+++ G+ A+ F + GL+P + ++ K N+L+ A+
Sbjct: 234 LDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAV 293
Query: 366 EFLIDLERDGFMVGKEASCTLA 387
E LE++ + CT A
Sbjct: 294 EMFEHLEKN-----RRVPCTYA 310
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 86/217 (39%), Gaps = 2/217 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICD-QVTLTVMVVMYSKAG 219
+L+ N YT +I + + ++ M + D Q+ T M M+ KAG
Sbjct: 473 MLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMF-KAG 531
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ FEEIK D RSY ++ ++AG + L M Q + + Y
Sbjct: 532 EPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYN 591
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
++ G+ G A ++ E ++ G P +I+ + +AY F+ +
Sbjct: 592 IVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK 651
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+E + + ++ K +++ A L +L + G
Sbjct: 652 RIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 688
>gi|125572530|gb|EAZ14045.1| hypothetical protein OsJ_03970 [Oryza sativa Japonica Group]
Length = 665
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 97/199 (48%), Gaps = 4/199 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
+ N+ Y +I YGK ++ + A + + M+ G + +T + ++ ++ KAG L A
Sbjct: 382 IKPNVVTYNTMIAIYGKSLEDEKAGSLVQDMQANGIQPNAITYSTILSIWVKAGKLDRAG 441
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+ FE+++ G +D Y +MV+AY RAG++ + + LL ++ E K L
Sbjct: 442 KLFEKLREAGTEIDPVLYQTMVVAYERAGLVSQSKRLLHDLKDSEDVPKETAIKILANA- 500
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
G E A +F AG D + ++I+ + + + + F MRKAG P
Sbjct: 501 ---GRVEEAAWLFRRAADAGDVRDTSVYRMMIDLFAKSRRHRSVIEVFDEMRKAGSLPDS 557
Query: 346 KCVALILSACEKENQLNRA 364
+ +A+ ++A K + ++A
Sbjct: 558 ETIAITMNAHGKLKEFDKA 576
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 128/325 (39%), Gaps = 34/325 (10%)
Query: 113 VSPETGNLSDLLAAWVR---------FMKPRRADWLAVLKQLKLMEHPLYLQV------A 157
V+P+ + S LLAA R F+ D AV L L + ++L +
Sbjct: 159 VAPDAFSYSTLLAALTRAGHLDHALTFLPLMEDD--AVAPDLVLFSNLIHLALRGGDAPK 216
Query: 158 ELALLEE-----SFEANIRDYTKIIHGYGKKMQIQNAENTLLA-MKRRGFICDQVTLTVM 211
LAL + +++ Y I Y K +++A LL M G D + + +
Sbjct: 217 ALALFSRLRGAAGIKPDLKAYNAAIAAYCKSDLLRDANRLLLHDMPSDGVAPDAESYSPI 276
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVM-AYVRAGMLDRGEVLLREMDAQE 270
+ ++ G A F ++ + S ++V+ AY + + + L M
Sbjct: 277 LAALARRGRHLAAVSLFTHMRAVARVKPDLSVFNIVLNAYGQLDLAREADRLFWSMRRAG 336
Query: 271 VYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAG----------ITPDARMCALLINAY 320
V Y +LR Y G A +F ++ A I P+ +I Y
Sbjct: 337 VAPSVVTYNTMLRVYGDAGLFGEAVHLFGLMRSAASDGSDRGGSVIKPNVVTYNTMIAIY 396
Query: 321 QMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGK 380
+ + +KA + Q+M+ G++P+ + ILS K +L+RA + L G +
Sbjct: 397 GKSLEDEKAGSLVQDMQANGIQPNAITYSTILSIWVKAGKLDRAGKLFEKLREAGTEIDP 456
Query: 381 EASCTLAAWFKRLGVVEEVEHVLRE 405
T+ ++R G+V + + +L +
Sbjct: 457 VLYQTMVVAYERAGLVSQSKRLLHD 481
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 2/146 (1%)
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
+ G L++A E++ G D SY +++ A RAG LD L M+ V
Sbjct: 140 RPGMLRLASGLLLEMRDRGVAPDAFSYSTLLAALTRAGHLDHALTFLPLMEDDAVAPDLV 199
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQ-FAGITPDARMCALLINAYQMAGQSQKAY-TAFQ 334
++ L+ G++ A +F ++ AGI PD + I AY + + A
Sbjct: 200 LFSNLIHLALRGGDAPKALALFSRLRGAAGIKPDLKAYNAAIAAYCKSDLLRDANRLLLH 259
Query: 335 NMRKAGLEPSDKCVALILSACEKENQ 360
+M G+ P + + IL+A + +
Sbjct: 260 DMPSDGVAPDAESYSPILAALARRGR 285
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 110/241 (45%), Gaps = 1/241 (0%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
E N+ Y ++ Y ++A L +++R+G + VT T++V Y K G ++ AE
Sbjct: 249 LEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAE 308
Query: 226 ETFEEIKLLGE-PLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
+E+K G+ +D+ +YG M+ Y + G +D + EM ++V VY ++ G
Sbjct: 309 RVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMING 368
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
G E Q+V + ++ G+ PD LI+ Y G +KA+ + M + GL +
Sbjct: 369 LCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAAT 428
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
+L + ++ AL + + G + + TL + G E+ ++ +
Sbjct: 429 TLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWK 488
Query: 405 E 405
E
Sbjct: 489 E 489
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 122/273 (44%), Gaps = 4/273 (1%)
Query: 134 RRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTL 193
R D A+L L PL+ +AE+ F + + ++ + Q+ +A N
Sbjct: 115 RFHDARALLSSLPPHAEPLFPHLAEVY---RDFTFSAVSFDLLLRAHADAGQLSSALNVF 171
Query: 194 LAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRA 253
M + G + ++ ++G+ MA + ++++ G D+ + M AY R
Sbjct: 172 DGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRD 231
Query: 254 GMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
G + + + EM+ + V Y A++ Y G +E A+R+ E++Q G++P+
Sbjct: 232 GRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTY 291
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV-ALILSACEKENQLNRALEFLIDLE 372
LL+ Y G+ ++A + M++ G D+ ++++ + +++ A ++
Sbjct: 292 TLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMR 351
Query: 373 RDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
G V T+ +LG +EEV+ VL+E
Sbjct: 352 DAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQE 384
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 93/245 (37%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ A Y ++ G+ I +A M +RG ++++ + ++ KAG
Sbjct: 420 MVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGK 479
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A ++E G + ++ +++ + G + E LL M S Y+
Sbjct: 480 TEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRT 539
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L GY G A + ++ G P M I + +A Q K M G
Sbjct: 540 LFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARG 599
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
L P+ +++ KE L+ A ++ +G L + F + G V+E
Sbjct: 600 LSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEAN 659
Query: 401 HVLRE 405
VL++
Sbjct: 660 LVLQK 664
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 89/196 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+GY ++ ++ +A M+ G + M+ K G ++ ++ +E++
Sbjct: 327 YGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEME 386
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+G DK SY +++ Y R G + + + R M + + Y LL+G+ +
Sbjct: 387 DVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAID 446
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A R++ + G+ P+ C+ L++ AG++++A ++ GL + ++
Sbjct: 447 DALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVI 506
Query: 353 SACEKENQLNRALEFL 368
+ K ++ A E L
Sbjct: 507 NGLCKIGRMAEAEELL 522
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 73/182 (40%)
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL 221
L N+ + +I+G K ++ AE L MK D +T + Y K G L
Sbjct: 491 LARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQL 550
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
A +++ LG + S + + A + + EM A+ + Y AL
Sbjct: 551 GTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGAL 610
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+ G+ GN A ++ + G+ P+ +C+ L++ + G+ +A Q + +
Sbjct: 611 IAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDM 670
Query: 342 EP 343
P
Sbjct: 671 IP 672
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 62/152 (40%), Gaps = 16/152 (10%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +IHG I A + M G + +T ++ K+G L A F +++
Sbjct: 738 YSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQ 797
Query: 233 LLGEPLDKRSYGSMVMAYVRAG-----------MLDRGEV-----LLREMDAQEVYVGSE 276
G + +Y +++ Y + G M++ G + LL +M V
Sbjct: 798 SKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYI 857
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITP 308
Y L+ GY +GN E ++++ + G+ P
Sbjct: 858 TYCTLIHGYIKSGNMEEISKLYDEMHIRGLLP 889
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 49/285 (17%), Positives = 106/285 (37%), Gaps = 46/285 (16%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I G+ K+ + A N M G + + ++ + K G + A
Sbjct: 603 NLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVL 662
Query: 229 E----------------EIKLLGEPLDKRSYGS----------MVMAYVRAGMLDRGEVL 262
+ EI + +D + G+ ++ ++G + + L
Sbjct: 663 QKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSL 722
Query: 263 LREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQM 322
+ + + Y +L+ G + +G+ + A + + + AG+TP+ LI
Sbjct: 723 FESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCK 782
Query: 323 AGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEA 382
+G+ +A F ++ G+ P+ ++ KE + A + + +G+M +EA
Sbjct: 783 SGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYM--EEA 840
Query: 383 ------------------SCTLAAWFKRLGVVEEVEHVLREYGLR 409
CTL + + G +EE+ + E +R
Sbjct: 841 IKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIR 885
>gi|125528270|gb|EAY76384.1| hypothetical protein OsI_04314 [Oryza sativa Indica Group]
Length = 665
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 96/196 (48%), Gaps = 4/196 (2%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I YGK ++ + A + + M+ G + +T + ++ ++ KAG L A + F
Sbjct: 385 NVVTYNTMIAIYGKSLEDEKAGSLVQDMQANGIQPNAITYSTILSIWVKAGKLDRAGKLF 444
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E+++ G +D Y +MV+AY RAG++ + + LL ++ E K L
Sbjct: 445 EKLREAGTEIDPVLYQTMVVAYERAGLVSQSKRLLHDLKDSEDVPKETAIKILANA---- 500
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G E A +F AG D + ++I+ + + + + F MRKAG P + +
Sbjct: 501 GRVEEAAWLFRRAADAGDVRDTSVYRMMIDLFAKSRRHRSVIEVFDEMRKAGSLPDSETI 560
Query: 349 ALILSACEKENQLNRA 364
A+ ++A K + ++A
Sbjct: 561 AITMNAHGKLKEFDKA 576
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 128/325 (39%), Gaps = 34/325 (10%)
Query: 113 VSPETGNLSDLLAAWVR---------FMKPRRADWLAVLKQLKLMEHPLYLQV------A 157
V+P+ + S LLAA R F+ D AV L L + ++L +
Sbjct: 159 VAPDAFSYSTLLAALTRAGHLDHALTFLPLMEDD--AVAPDLVLFSNLIHLALRGGDAPK 216
Query: 158 ELALLEE-----SFEANIRDYTKIIHGYGKKMQIQNAENTLLA-MKRRGFICDQVTLTVM 211
LAL + +++ Y I Y K +++A LL M G D + + +
Sbjct: 217 ALALFSRLRGAAGIKPDLKAYNAAIAAYCKSDLLRDANRLLLHDMPSDGVAPDAESYSPI 276
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVM-AYVRAGMLDRGEVLLREMDAQE 270
+ ++ G A F ++ + S ++V+ AY + + + L M
Sbjct: 277 LAALARRGRHLAAVSLFTHMRTVARVKPDLSVFNIVLNAYGQLDLAREADRLFWSMRRAG 336
Query: 271 VYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAG----------ITPDARMCALLINAY 320
V Y +LR Y G A +F ++ A I P+ +I Y
Sbjct: 337 VAPSVVTYNTMLRVYGDAGLFGEAVHLFGLMRSAASDGSDRGGSVIKPNVVTYNTMIAIY 396
Query: 321 QMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGK 380
+ + +KA + Q+M+ G++P+ + ILS K +L+RA + L G +
Sbjct: 397 GKSLEDEKAGSLVQDMQANGIQPNAITYSTILSIWVKAGKLDRAGKLFEKLREAGTEIDP 456
Query: 381 EASCTLAAWFKRLGVVEEVEHVLRE 405
T+ ++R G+V + + +L +
Sbjct: 457 VLYQTMVVAYERAGLVSQSKRLLHD 481
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 2/146 (1%)
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
+AG L++A E++ G D SY +++ A RAG LD L M+ V
Sbjct: 140 RAGMLRLASGLLLEMRDRGVAPDAFSYSTLLAALTRAGHLDHALTFLPLMEDDAVAPDLV 199
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQ-FAGITPDARMCALLINAYQMAGQSQKAY-TAFQ 334
++ L+ G++ A +F ++ AGI PD + I AY + + A
Sbjct: 200 LFSNLIHLALRGGDAPKALALFSRLRGAAGIKPDLKAYNAAIAAYCKSDLLRDANRLLLH 259
Query: 335 NMRKAGLEPSDKCVALILSACEKENQ 360
+M G+ P + + IL+A + +
Sbjct: 260 DMPSDGVAPDAESYSPILAALARRGR 285
>gi|414887034|tpg|DAA63048.1| TPA: crs2 associated factor1 [Zea mays]
Length = 617
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 1/196 (0%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQV-TLTVMVVMYSKAGNLKMAEETFEEIK 232
T +I G ++ AE L G I + ++ Y + +LK AE+ +E+
Sbjct: 267 TALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMS 326
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D+ +Y +V AY RAG + +LL+EM+A V S V+ +L G+ G+ +
Sbjct: 327 QCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQ 386
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A V +Q +G+ PD ++I+ + A AF MR+ G+EP ++
Sbjct: 387 KAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLI 446
Query: 353 SACEKENQLNRALEFL 368
A K + +RA E
Sbjct: 447 DAHCKGGRHDRAAELF 462
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 99/233 (42%), Gaps = 10/233 (4%)
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
R Y ++ GY + ++NAE L M + G D+ T +++V Y++AG + A +E
Sbjct: 300 RAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKE 359
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGE-----VLLREMDAQEVYVGSEVYKALLRGY 285
++ D S V + + AG DRG+ +LREM A V Y ++ +
Sbjct: 360 MEA-----DGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTF 414
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
A F ++ GI PD LI+A+ G+ +A F+ MR++ P
Sbjct: 415 GKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGT 474
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
++++ ++ L +++ G + TL + R G +E
Sbjct: 475 TTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKE 527
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 78/172 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+++I+ G+ + Q A L M+ G D+ VM+ + K L A + F +++
Sbjct: 372 FSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMR 431
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D ++ +++ A+ + G DR L EM G+ Y ++ + E
Sbjct: 432 EEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWE 491
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
G + + ++ G+ P+ L++ Y +G+ ++A + M+ GL+PS
Sbjct: 492 GVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPS 543
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 66/171 (38%), Gaps = 2/171 (1%)
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
EP D + ++ A+ RA + D LL A + S AL+ G A+
Sbjct: 225 EP-DAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAE 283
Query: 296 RVFEAIQFAG-ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSA 354
+F AG I P R L+ Y + A M + G+ P + +L++ A
Sbjct: 284 ALFLEFFLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDA 343
Query: 355 CEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ + A L ++E DG + A F+ G ++ VLRE
Sbjct: 344 YTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLRE 394
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 90/205 (43%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+S +I Y +I+G K +++ A LL M+ G + VT T ++ K G +
Sbjct: 173 KSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDE 232
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A E E +K G D YG+++ + G LDRG+ L EM + + Y L+
Sbjct: 233 AMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVH 292
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G + A V A+ GI PD LI+ G++ A M + G EP
Sbjct: 293 GLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEP 352
Query: 344 SDKCVALILSACEKENQLNRALEFL 368
S+ ++LS KE + A + L
Sbjct: 353 SNVTYNVLLSGLCKEGLVIDAFKIL 377
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 90/214 (42%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E E N+ + +I G K+ ++ A M ++G + VT +++ KAG +K
Sbjct: 419 ENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIK 478
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A E ++++ LG + +Y ++ + + ML+ + L EM + Y L+
Sbjct: 479 EAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLM 538
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G+ E A+ +F+ + A PD +I+ AG Q M + GL
Sbjct: 539 ASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLR 598
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
P + +++ K +L+ A L + GF
Sbjct: 599 PDALTFSTLINRLSKLGELDEAKSALERMVASGF 632
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 84/209 (40%), Gaps = 2/209 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + AN+ Y+ ++HG + Q + A L AM G D VT T ++ K G
Sbjct: 275 MLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGR 334
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A + + GE +Y ++ + G++ +LR M + Y
Sbjct: 335 ATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNT 394
Query: 281 LLRGYSMNGNSEGAQRVFEAI--QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
L++G G + A ++F ++ + P+ +LI G+ KA + M K
Sbjct: 395 LMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVK 454
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEF 367
G + ++L C K ++ A+E
Sbjct: 455 KGSCGNLVTYNMLLGGCLKAGKIKEAMEL 483
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 66/167 (39%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKL 233
T ++ G K ++ A L AMK++GF D V ++ + GNL +E F+E+
Sbjct: 218 TTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLG 277
Query: 234 LGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEG 293
G + +Y +V R G +L M ++ Y L+ G +G +
Sbjct: 278 KGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATH 337
Query: 294 AQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
A + + G P +L++ G A+ + M + G
Sbjct: 338 AMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKG 384
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 84/207 (40%), Gaps = 13/207 (6%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
L+ QV +L + SF Y+ +I G+ K + A+ M+ G +
Sbjct: 483 LWKQVLDLGFVPNSFT-----YSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTL 537
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ K G+L+ A+ F+E+ D S+ +M+ ++AG ++E+ + V
Sbjct: 538 MASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQ----FVKELQMKMV 593
Query: 272 YVG----SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQ 327
+G + + L+ S G + A+ E + +G TPDA + L+ G +
Sbjct: 594 EMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTT 653
Query: 328 KAYTAFQNMRKAGLEPSDKCVALILSA 354
+ M G K V+ IL+
Sbjct: 654 EIINLLHQMAAKGTVLDRKIVSTILTC 680
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 77/176 (43%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
N+ Y ++ G K +I+ A + GF+ + T ++++ + K L +A+
Sbjct: 459 GNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGL 518
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
F E++ G Y +++ + + G L++ + L +EM + ++ G
Sbjct: 519 FCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLK 578
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G+ + + + + G+ PDA + LIN G+ +A +A + M +G P
Sbjct: 579 AGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTP 634
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 58/147 (39%)
Query: 198 RRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLD 257
+RGF + + +++ + G + A E+ D SY +++ +A L
Sbjct: 137 KRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLK 196
Query: 258 RGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
LL EM+A + S L+ G +G + A + EA++ G D + LI
Sbjct: 197 EAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLI 256
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPS 344
+ + G + F M G+ +
Sbjct: 257 SGFCNNGNLDRGKELFDEMLGKGISAN 283
>gi|115440859|ref|NP_001044709.1| Os01g0833000 [Oryza sativa Japonica Group]
gi|20805252|dbj|BAB92918.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113534240|dbj|BAF06623.1| Os01g0833000 [Oryza sativa Japonica Group]
Length = 665
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 96/196 (48%), Gaps = 4/196 (2%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I YGK ++ + A + + M+ G + +T + ++ ++ KAG L A + F
Sbjct: 385 NVVTYNTMIAIYGKSLEDEKAGSLVQDMQANGIQPNAITYSTILSIWVKAGKLDRAGKLF 444
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E+++ G +D Y +MV+AY RAG++ + + LL ++ E K L
Sbjct: 445 EKLREAGTEIDPVLYQTMVVAYERAGLVSQSKRLLHDLKDSEDVPKETAIKILANA---- 500
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G E A +F AG D + ++I+ + + + + F MRKAG P + +
Sbjct: 501 GRVEEAAWLFRRAADAGDVRDTSVYRMMIDLFAKSRRHRSVIEVFDEMRKAGSLPDSETI 560
Query: 349 ALILSACEKENQLNRA 364
A+ ++A K + ++A
Sbjct: 561 AITMNAHGKLKEFDKA 576
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 128/325 (39%), Gaps = 34/325 (10%)
Query: 113 VSPETGNLSDLLAAWVR---------FMKPRRADWLAVLKQLKLMEHPLYLQV------A 157
V+P+ + S LLAA R F+ D AV L L + ++L +
Sbjct: 159 VAPDAFSYSTLLAALTRAGHLDHALTFLPLMEDD--AVAPDLVLFSNLIHLALRGGDAPK 216
Query: 158 ELALLEE-----SFEANIRDYTKIIHGYGKKMQIQNAENTLLA-MKRRGFICDQVTLTVM 211
LAL + +++ Y I Y K +++A LL M G D + + +
Sbjct: 217 ALALFSRLRGAAGIKPDLKAYNAAIAAYCKSDLLRDANRLLLHDMPSDGVAPDAESYSPI 276
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVM-AYVRAGMLDRGEVLLREMDAQE 270
+ ++ G A F ++ + S ++V+ AY + + + L M
Sbjct: 277 LAALARRGRHLAAVSLFTHMRAVARVKPDLSVFNIVLNAYGQLDLAREADRLFWSMRRAG 336
Query: 271 VYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAG----------ITPDARMCALLINAY 320
V Y +LR Y G A +F ++ A I P+ +I Y
Sbjct: 337 VAPSVVTYNTMLRVYGDAGLFGEAVHLFGLMRSAASDGSDRGGSVIKPNVVTYNTMIAIY 396
Query: 321 QMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGK 380
+ + +KA + Q+M+ G++P+ + ILS K +L+RA + L G +
Sbjct: 397 GKSLEDEKAGSLVQDMQANGIQPNAITYSTILSIWVKAGKLDRAGKLFEKLREAGTEIDP 456
Query: 381 EASCTLAAWFKRLGVVEEVEHVLRE 405
T+ ++R G+V + + +L +
Sbjct: 457 VLYQTMVVAYERAGLVSQSKRLLHD 481
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 2/146 (1%)
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
+AG L++A E++ G D SY +++ A RAG LD L M+ V
Sbjct: 140 RAGMLRLASGLLLEMRDRGVAPDAFSYSTLLAALTRAGHLDHALTFLPLMEDDAVAPDLV 199
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQ-FAGITPDARMCALLINAYQMAGQSQKAY-TAFQ 334
++ L+ G++ A +F ++ AGI PD + I AY + + A
Sbjct: 200 LFSNLIHLALRGGDAPKALALFSRLRGAAGIKPDLKAYNAAIAAYCKSDLLRDANRLLLH 259
Query: 335 NMRKAGLEPSDKCVALILSACEKENQ 360
+M G+ P + + IL+A + +
Sbjct: 260 DMPSDGVAPDAESYSPILAALARRGR 285
>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
Length = 1098
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 110/255 (43%), Gaps = 5/255 (1%)
Query: 156 VAELALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
V L +EE E N+ Y +++GY + Q +A L ++ RGF + VT T++
Sbjct: 260 VHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLL 319
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGE-PLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE 270
V Y N++ AE +EI+ + +D+ +G+++ Y + G ++ LL EM
Sbjct: 320 VKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSR 379
Query: 271 VYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAY 330
+ V VY ++ GY G A + + G+ PD L++ Y G KA+
Sbjct: 380 LQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAF 439
Query: 331 TAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWF 390
+ M + G + +L ++ AL + + G + + TL F
Sbjct: 440 ETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGF 499
Query: 391 KRLGVVEEVEHVLRE 405
+ G E+ ++ +E
Sbjct: 500 FKSGKTEKALNLWKE 514
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 90/198 (45%), Gaps = 1/198 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+ +I+GY + ++++A L M + +M+ Y K G + A E+
Sbjct: 352 FGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMT 411
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+G D SY S+V Y + G++++ M + Y ALL+G+ G+ +
Sbjct: 412 GVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSID 471
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A R++ + GI P+ C+ L++ + +G+++KA ++ GL + ++
Sbjct: 472 DALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVI 531
Query: 353 SACEKENQLNRALEFLID 370
+ K ++ A E L+D
Sbjct: 532 NGLCKIERMPEAEE-LVD 548
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 81/169 (47%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
+I G K +I++A+N L +K +GF+ D T + ++ S +G + +A + + + +G
Sbjct: 731 VIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVG 790
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
+ +Y S++ ++G L R L +++ + + + Y L+ + +G A
Sbjct: 791 LTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAF 850
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
++ + + GI P ++LIN G ++A M + ++P+
Sbjct: 851 KLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPN 899
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 77/182 (42%)
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL 221
L N + +I+G K ++ AE + MK+ D +T + Y K G++
Sbjct: 516 LARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDM 575
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
A E++ LG + S++ + A + +L EM + + + Y AL
Sbjct: 576 DRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGAL 635
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+ G+ G+ A ++ + G+ P+ +C+ L++ + G+ +A QN+ +
Sbjct: 636 IAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDM 695
Query: 342 EP 343
P
Sbjct: 696 IP 697
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/204 (19%), Positives = 84/204 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L++ N + ++ G+ K + + A N RG + T ++ K
Sbjct: 480 MLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIER 539
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ AEE +++K P D +Y ++ Y + G +DR +L E++ E + +
Sbjct: 540 MPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNS 599
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G+ + + + G++P+ LI + G AY + M + G
Sbjct: 600 LITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKG 659
Query: 341 LEPSDKCVALILSACEKENQLNRA 364
L P+ + ++S ++ + + A
Sbjct: 660 LVPNLFICSSLVSCFYRKGKFDEA 683
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 108/269 (40%), Gaps = 10/269 (3%)
Query: 151 PLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTV 210
PL+ + E+ + F + + ++ Q+ A M+ G +
Sbjct: 157 PLFPHLVEV---YKEFSFSAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNS 213
Query: 211 MVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE 270
++ ++ G+L FE+++ G DK + M AY + + + EM
Sbjct: 214 ILNRLAQTGDLGATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMG 273
Query: 271 VYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAY 330
V V Y A++ GY G + A+R+ +++ G +P+ LL+ Y ++A
Sbjct: 274 VEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAE 333
Query: 331 TAFQNMRKAGLEPSDKCV--ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAA 388
Q +RK D+ V A+I C+ ++ A L ++ V +
Sbjct: 334 GVVQEIRKNKQLVVDEAVFGAVINGYCQM-GRMEDAARLLNEMVDSRLQVNLFVYNIMIN 392
Query: 389 WFKRLGVVEEVEHVLRE---YGLR-ETYS 413
+ +LG + E ++L E G+R +TYS
Sbjct: 393 GYCKLGRMVEAHNILHEMTGVGVRPDTYS 421
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 85/216 (39%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ + N+ Y +I+GY K ++ A N L M G D + +V Y K G
Sbjct: 375 MVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGL 434
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A ET+ + G +Y +++ + G +D L M + +
Sbjct: 435 MNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCST 494
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL G+ +G +E A +++ G+ + +IN + +A M++
Sbjct: 495 LLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWR 554
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
P + S K ++RA L +LE GF
Sbjct: 555 CPPDIITYRTLFSGYCKIGDMDRASRILNELENLGF 590
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 88/174 (50%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I + +K Q+++A L M +G + + +T ++ Y ++GN+ ++ +++
Sbjct: 474 YSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMM 533
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ D +Y +++ Y++ + LL M+ ++V Y L+ G+S++GN +
Sbjct: 534 VNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQ 593
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
A +FE + GI PD +IN + AG S++A+ M + G P DK
Sbjct: 594 EAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDDK 647
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 83/185 (44%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+L + +I Y +I G ++ + A + M R + VT ++++ + + G
Sbjct: 426 TMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKG 485
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A +E+ G + +Y S++ Y R+G + +G+ L++M +V Y
Sbjct: 486 QVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYN 545
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ GY A ++ ++ + PD +LIN + + G Q+A F+ M
Sbjct: 546 TLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAK 605
Query: 340 GLEPS 344
G+EP
Sbjct: 606 GIEPD 610
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 86/199 (43%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E N ++H Y K ++ + + M++R D VT VMV +AG+ + A
Sbjct: 153 EVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMA 212
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
+ + G +Y S++ R+GM D+ + +EMD V + L+ G+
Sbjct: 213 LVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFC 272
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G E A ++++ ++ GI PD + LI + G+ A + MR GL P
Sbjct: 273 RVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGV 332
Query: 347 CVALILSACEKENQLNRAL 365
+++ + ++ AL
Sbjct: 333 IYTMVIGGFCRAGLMSDAL 351
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 92/208 (44%), Gaps = 4/208 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y +++G K+ ++ +AE L M+ RG D T T ++ Y G L A + F
Sbjct: 365 DVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLF 424
Query: 229 EEIKLLGEPL--DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
+ +L + L D +Y +++ R G LD+ L +M ++E++ Y L+ +
Sbjct: 425 D--TMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHC 482
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G E A + + GI P+ +I Y +G K Q M + P
Sbjct: 483 EKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLI 542
Query: 347 CVALILSACEKENQLNRALEFLIDLERD 374
++ KE++++ A + L +E++
Sbjct: 543 TYNTLIHGYIKEDKMHDAFKLLNMMEKE 570
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 89/199 (44%)
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
TL +MV Y KA + E++ D ++ MV A RAG + L+ M
Sbjct: 158 TLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSM 217
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
++ + G Y ++L+G +G + A VF+ + G+ PD R +LI + G+
Sbjct: 218 VSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEI 277
Query: 327 QKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
++A ++ MR G++P + ++ + +++ A+ +L ++ G + +
Sbjct: 278 EEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMV 337
Query: 387 AAWFKRLGVVEEVEHVLRE 405
F R G++ + V E
Sbjct: 338 IGGFCRAGLMSDALRVRDE 356
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/273 (19%), Positives = 109/273 (39%), Gaps = 37/273 (13%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++R +T +I G+ + +I+ A M+ RG D V+ + ++ ++++ G + A
Sbjct: 260 DVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYL 319
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG----------------------------- 259
E++ G D Y ++ + RAG++
Sbjct: 320 REMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKE 379
Query: 260 ------EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
E LL EM + V + L+ GY + G + A ++F+ + + PD
Sbjct: 380 RRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTY 439
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL-SACEKENQLNRALEFLIDLE 372
LI+ G KA + +M + P+ ++++ S CEK Q+ A FL ++
Sbjct: 440 NTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEK-GQVEDAFGFLDEMI 498
Query: 373 RDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
G + ++ + R G V + + L++
Sbjct: 499 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQK 531
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 87/211 (41%), Gaps = 4/211 (1%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+++ + + I Y ++ G + A M G D + T+++ + + G
Sbjct: 216 SMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVG 275
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A + ++E++ G D S+ ++ + R G +D LREM + +Y
Sbjct: 276 EIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYT 335
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
++ G+ G A RV + + G PD L+N + A MR+
Sbjct: 336 MVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRER 395
Query: 340 GLEPSDKC--VALILSACEKENQLNRALEFL 368
G+ P D C LI C E +L++AL+
Sbjct: 396 GV-PPDLCTFTTLIHGYC-IEGKLDKALQLF 424
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 114/253 (45%), Gaps = 6/253 (2%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRG-FIC--DQVTLTVMVVMYSKAG 219
E + ++ Y +I G + + Q A LL M G + C + V+ + ++ + K G
Sbjct: 158 ELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEG 217
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ A F+E+ G P D +Y S++ +A +++ E +L+ M + V + Y
Sbjct: 218 EVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYN 277
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
++RGY G E A R+ + + +G+ PD LLI Y G+ +A + F +M +
Sbjct: 278 IMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRK 337
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEV 399
G +P+ ++L + L + L + RDG A L + + G V++
Sbjct: 338 GQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKA 397
Query: 400 EHV---LREYGLR 409
+R+ GLR
Sbjct: 398 MTAFTEMRQNGLR 410
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 79/183 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + F ++ Y+ +I G K + AE L M +G + + T +M+ Y G
Sbjct: 229 MIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQ 288
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ A +++ G D +Y ++ Y + G + M + S +Y
Sbjct: 289 LEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHI 348
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL GY+ G + + + + GI + R +LI AY G KA TAF MR+ G
Sbjct: 349 LLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNG 408
Query: 341 LEP 343
L P
Sbjct: 409 LRP 411
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 76/189 (40%), Gaps = 4/189 (2%)
Query: 160 ALLEESFE----ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
A+L+ F+ N R Y +I GY Q++ A L M G D VT +++ Y
Sbjct: 259 AILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYY 318
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
K G A F+ + G+ + Y ++ Y G L LL M +
Sbjct: 319 CKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEH 378
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
+ L+ Y+ +G + A F ++ G+ PD + +I+ G+ + A F
Sbjct: 379 RAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQ 438
Query: 336 MRKAGLEPS 344
M GL P+
Sbjct: 439 MVSEGLSPN 447
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 106/269 (39%), Gaps = 14/269 (5%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ E NI +T +IHG + + E M RG D + + ++ K G
Sbjct: 439 MVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGR 498
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A++ F+ + +G + SY +++ Y G +D M + + S Y A
Sbjct: 499 VVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNA 558
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA----LLINAYQMAGQSQKAYTAFQNM 336
LL GY NG E A ++ + D + CA ++++ AG+ A + M
Sbjct: 559 LLNGYFKNGRVEDALALYREM----FRKDVKFCAITSNIILHGLFQAGRIVAARELYMKM 614
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVV 396
G + + +L + + ++ AL DL F + + ++G +
Sbjct: 615 VDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRI 674
Query: 397 EEVEHVLREYGLRE------TYSKIPGSR 419
+E + + LR TYS + SR
Sbjct: 675 DEAKSLFSAMVLRGPVPHVITYSLMIKSR 703
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 96/228 (42%), Gaps = 14/228 (6%)
Query: 128 VRFMKPRRADWLA--VLKQLKLMEHPLYLQVAELALLEESFEANIRD--------YTKII 177
VR +K L V+ + L+++ Y ++ A F++ +R Y ++
Sbjct: 293 VRLLKKMSGSGLQPDVVTYILLIQY--YCKIGRCAEARSVFDSMVRKGQKPNSTIYHILL 350
Query: 178 HGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEP 237
HGY K + + + L M R G + +++ Y+K G + A F E++ G
Sbjct: 351 HGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLR 410
Query: 238 LDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRV 297
D SY +++ + G ++ +M ++ + + +L+ G G + + +
Sbjct: 411 PDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEEL 470
Query: 298 -FEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
FE I GI PDA +++ G+ +A F + G++P+
Sbjct: 471 AFEMIN-RGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPN 517
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 90/211 (42%), Gaps = 2/211 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +++GY K ++++A M R+ +T +++ +AG + A E + ++
Sbjct: 556 YNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMV 615
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G L +Y +++ +D + ++ ++E + + ++ G +
Sbjct: 616 DRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRID 675
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ +F A+ G P +L+I + G +++ F +M K G + +I+
Sbjct: 676 EAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVII 735
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEAS 383
++ + RA +L ++ F V EAS
Sbjct: 736 RRLLEKGDVRRAGTYLTKIDEKNFSV--EAS 764
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 52/273 (19%), Positives = 103/273 (37%), Gaps = 23/273 (8%)
Query: 66 TQVKDDTSMFTWIQIGPNITEEQKQAISQ-FPRKMTKRCKAFVKQI-ICVSPETGNLSDL 123
+ +D M I + PN+ F KM + K F + + I + P++ + L
Sbjct: 500 VEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNAL 559
Query: 124 LAAWVRFMKPRRADWLAVLKQL------------KLMEHPLY-----LQVAEL--ALLEE 164
L + F R D LA+ +++ ++ H L+ + EL +++
Sbjct: 560 LNGY--FKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDR 617
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA 224
+ I Y ++ G + + A ++ + F D T +++ K G + A
Sbjct: 618 GTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEA 677
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
+ F + L G +Y M+ + + G+L+ + L M+ S + ++R
Sbjct: 678 KSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRR 737
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
G+ A I + +A ALLI
Sbjct: 738 LLEKGDVRRAGTYLTKIDEKNFSVEASTAALLI 770
>gi|224098475|ref|XP_002334555.1| predicted protein [Populus trichocarpa]
gi|222873072|gb|EEF10203.1| predicted protein [Populus trichocarpa]
Length = 244
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%)
Query: 177 IHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGE 236
++GY M++ A M +G+ D +++ Y KA + A++ + E+ L G
Sbjct: 1 MYGYSLCMEVVEARKLFDVMITKGYKPDVFCYNILINGYCKATRIDKAKQLYNEMILQGL 60
Query: 237 PLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQR 296
DK +Y +++ + G L + L + M Y LL G G A R
Sbjct: 61 TPDKVTYNTLIHGLCQLGRLREAQDLFKNMHKNGNLPDLFAYSILLDGLCKQGYLGKAFR 120
Query: 297 VFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACE 356
+F A+Q + + PD M +L++A +G + A F + GL+P+ + I++
Sbjct: 121 LFRAMQSSSLKPDLVMYNILVDAMCKSGNLKDARELFSELFVKGLQPNVQIYTTIINGLC 180
Query: 357 KENQLNRALEFLIDLERDG 375
KE L+ ALE ++E DG
Sbjct: 181 KEGLLDEALEAFRNMEEDG 199
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 100/218 (45%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
++ + ++ ++ Y +I+GY K +I A+ M +G D+VT ++ + G
Sbjct: 19 VMITKGYKPDVFCYNILINGYCKATRIDKAKQLYNEMILQGLTPDKVTYNTLIHGLCQLG 78
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
L+ A++ F+ + G D +Y ++ + G L + L R M + + +Y
Sbjct: 79 RLREAQDLFKNMHKNGNLPDLFAYSILLDGLCKQGYLGKAFRLFRAMQSSSLKPDLVMYN 138
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ +GN + A+ +F + G+ P+ ++ +IN G +A AF+NM +
Sbjct: 139 ILVDAMCKSGNLKDARELFSELFVKGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEED 198
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
G P + +I+ + +RA+ + ++ GF+
Sbjct: 199 GCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFI 236
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 77/191 (40%)
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
YS + A + F+ + G D Y ++ Y +A +D+ + L EM Q +
Sbjct: 4 YSLCMEVVEARKLFDVMITKGYKPDVFCYNILINGYCKATRIDKAKQLYNEMILQGLTPD 63
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
Y L+ G G AQ +F+ + G PD ++L++ G KA+ F+
Sbjct: 64 KVTYNTLIHGLCQLGRLREAQDLFKNMHKNGNLPDLFAYSILLDGLCKQGYLGKAFRLFR 123
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
M+ + L+P +++ A K L A E +L G + T+ + G
Sbjct: 124 AMQSSSLKPDLVMYNILVDAMCKSGNLKDARELFSELFVKGLQPNVQIYTTIINGLCKEG 183
Query: 395 VVEEVEHVLRE 405
+++E R
Sbjct: 184 LLDEALEAFRN 194
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 58/138 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ ++ G K+ + A AM+ D V ++V K+GNLK A E F E+
Sbjct: 102 YSILLDGLCKQGYLGKAFRLFRAMQSSSLKPDLVMYNILVDAMCKSGNLKDARELFSELF 161
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ G + + Y +++ + G+LD R M+ Y ++RG+ + +
Sbjct: 162 VKGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEFSYNVIIRGFLQHKDES 221
Query: 293 GAQRVFEAIQFAGITPDA 310
A + ++ G D
Sbjct: 222 RAVHLIGEMRDRGFIADV 239
>gi|224065693|ref|XP_002301924.1| predicted protein [Populus trichocarpa]
gi|222843650|gb|EEE81197.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 95/202 (47%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ E +++ + II G+ K + A L ++ G TL ++ G +
Sbjct: 265 DKLEVDVQLWNDIIVGFAKAGDLDKALEFLGVVQGSGLSVKTATLVTVIWGLGNCGRTEE 324
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
AE FEE++ G R+Y +++ YV+AG+L E ++ EM+ V + Y L+
Sbjct: 325 AEAIFEEMRDNGLQPRTRAYNALLRGYVKAGLLRDAEFVVSEMERSGVLPNEQTYSLLID 384
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
Y E A+ V + ++ + + P+A + + ++ +Y+ G+ QK + + M +G+ P
Sbjct: 385 AYGNAERWESARIVLKEMEASNVQPNAYVFSRILASYRDKGEWQKTFQVLREMEDSGVRP 444
Query: 344 SDKCVALILSACEKENQLNRAL 365
+++ K N L+ A+
Sbjct: 445 DRIFYNVLIDTFGKFNCLDHAM 466
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 3/234 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I +GK + +A T M G D +T +V + KAG AEE FEE+
Sbjct: 449 YNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRAEELFEEMM 508
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G ++ M+ ++ D + LL M +Q + + Y L+ Y +G +
Sbjct: 509 EKGYLPCNTTFNIMINSFGDQERWDDVKNLLTNMRSQGLLPNAVTYTTLIDIYGKSGRFD 568
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + ++ AG+ P + M L+NAY G S +A +AF MR GL+PS + ++
Sbjct: 569 DAIECLDDMKAAGLKPSSTMYNALLNAYAQRGLSDQAVSAFWAMRDDGLKPSLLALNSLI 628
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREY 406
+A K+ + A L ++ + K T K L +VE+ + V Y
Sbjct: 629 NAFGKDRRDVEAFVVLQYMKENDL---KPDVVTYTTLMKALILVEKFDKVPSVY 679
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 92/212 (43%)
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA 224
+ + N +++I+ Y K + Q L M+ G D++ V++ + K L A
Sbjct: 406 NVQPNAYVFSRILASYRDKGEWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKFNCLDHA 465
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
TF+ + G D ++ ++V + +AG DR E L EM + + + ++
Sbjct: 466 MATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRAEELFEEMMEKGYLPCNTTFNIMINS 525
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
+ + + + ++ G+ P+A LI+ Y +G+ A +M+ AGL+PS
Sbjct: 526 FGDQERWDDVKNLLTNMRSQGLLPNAVTYTTLIDIYGKSGRFDDAIECLDDMKAAGLKPS 585
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDGF 376
+L+A + ++A+ + DG
Sbjct: 586 STMYNALLNAYAQRGLSDQAVSAFWAMRDDGL 617
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 103/235 (43%), Gaps = 2/235 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMV--VMYSKAGNLKMAEETFEE 230
Y +I + I+ A N + M+ G+ D V ++++ +M + N + ++ + E
Sbjct: 202 YNALISACARNNDIEKALNLICRMREDGYPSDLVNYSLIIRSLMKNNRANSSILQKIYRE 261
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
I +D + + +++ + +AG LD+ L + + V + ++ G G
Sbjct: 262 IDRDKLEVDVQLWNDIIVGFAKAGDLDKALEFLGVVQGSGLSVKTATLVTVIWGLGNCGR 321
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
+E A+ +FE ++ G+ P R L+ Y AG + A M ++G+ P+++ +L
Sbjct: 322 TEEAEAIFEEMRDNGLQPRTRAYNALLRGYVKAGLLRDAEFVVSEMERSGVLPNEQTYSL 381
Query: 351 ILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A + A L ++E + A ++ G ++ VLRE
Sbjct: 382 LIDAYGNAERWESARIVLKEMEASNVQPNAYVFSRILASYRDKGEWQKTFQVLRE 436
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 103/218 (47%), Gaps = 8/218 (3%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTV-----MVVMYSK 217
E+ + +++ +Y+ II M+ A +++L R D++ + V ++V ++K
Sbjct: 227 EDGYPSDLVNYSLIIRSL---MKNNRANSSILQKIYREIDRDKLEVDVQLWNDIIVGFAK 283
Query: 218 AGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
AG+L A E ++ G + + +++ G + E + EM + +
Sbjct: 284 AGDLDKALEFLGVVQGSGLSVKTATLVTVIWGLGNCGRTEEAEAIFEEMRDNGLQPRTRA 343
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y ALLRGY G A+ V ++ +G+ P+ + +LLI+AY A + + A + M
Sbjct: 344 YNALLRGYVKAGLLRDAEFVVSEMERSGVLPNEQTYSLLIDAYGNAERWESARIVLKEME 403
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+ ++P+ + IL++ + + + + L ++E G
Sbjct: 404 ASNVQPNAYVFSRILASYRDKGEWQKTFQVLREMEDSG 441
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/236 (18%), Positives = 99/236 (41%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+ + R Y ++ GY K +++AE + M+R G + ++ T ++++ Y A +
Sbjct: 334 DNGLQPRTRAYNALLRGYVKAGLLRDAEFVVSEMERSGVLPNEQTYSLLIDAYGNAERWE 393
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A +E++ + + ++ +Y G + +LREM+ V Y L+
Sbjct: 394 SARIVLKEMEASNVQPNAYVFSRILASYRDKGEWQKTFQVLREMEDSGVRPDRIFYNVLI 453
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
+ + A F+ + GI PD L++ + AG+ +A F+ M + G
Sbjct: 454 DTFGKFNCLDHAMATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRAEELFEEMMEKGYL 513
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
P + +++++ + + + L ++ G + TL + + G ++
Sbjct: 514 PCNTTFNIMINSFGDQERWDDVKNLLTNMRSQGLLPNAVTYTTLIDIYGKSGRFDD 569
>gi|255557939|ref|XP_002519998.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540762|gb|EEF42322.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 498
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 101/220 (45%)
Query: 185 QIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYG 244
++++ + + MK++GF + + ++ +Y G K A EEI+ +G PLDK Y
Sbjct: 141 RLEDTWSVINEMKQKGFQLNSFVYSKVIGLYRDNGMWKKAIGIIEEIREMGMPLDKHIYN 200
Query: 245 SMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFA 304
S++ + + G LD +L M Q + + +L+R + GN A +F +Q
Sbjct: 201 SIIDTFGKYGELDEALEVLSNMQQQGITPDIVTWNSLIRWHCKAGNLSKALELFSKMQAQ 260
Query: 305 GITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
G+ PD ++ +I+ G+ F M+ G + S A+++ + + A
Sbjct: 261 GLYPDPKILVTIISRLAEQGKWNIIRENFDIMKSWGYKKSGAIYAILVDIYGQYGRFQDA 320
Query: 365 LEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
E + L+ +G + C LA + + G+ E+ VL+
Sbjct: 321 EECISALKSEGILPSASMFCVLANAYAQQGLCEQTVKVLQ 360
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 110/257 (42%), Gaps = 35/257 (13%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y II +GK ++ A L M+++G D VT ++ + KAGNL A E F +++
Sbjct: 199 YNSIIDTFGKYGELDEALEVLSNMQQQGITPDIVTWNSLIRWHCKAGNLSKALELFSKMQ 258
Query: 233 LLG-------------------------EPLD-------KRS---YGSMVMAYVRAGMLD 257
G E D K+S Y +V Y + G
Sbjct: 259 AQGLYPDPKILVTIISRLAEQGKWNIIRENFDIMKSWGYKKSGAIYAILVDIYGQYGRFQ 318
Query: 258 RGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
E + + ++ + + ++ L Y+ G E +V + ++ GI P+ M +LI
Sbjct: 319 DAEECISALKSEGILPSASMFCVLANAYAQQGLCEQTVKVLQLMEAEGIEPNLIMLNVLI 378
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
NA+ +AG+ ++A + + +M+++G+ P + ++ A + + + E ++E G
Sbjct: 379 NAFGIAGRHREALSIYHHMKESGISPDVVTYSTLMKAYIRARKFDEVPEIYSEMESSGCT 438
Query: 378 VGKEASCTLAAWFKRLG 394
K+A L A LG
Sbjct: 439 PDKKAREILQAALMVLG 455
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 82/190 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ G+ KK ++ AE L + G +Q T +++ AG L+ E+K
Sbjct: 94 YNIMLRGFLKKGLLRVAERVLRILDDLGLHRNQETYEILLDYNVNAGRLEDTWSVINEMK 153
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G L+ Y ++ Y GM + ++ E+ + + +Y +++ + G +
Sbjct: 154 QKGFQLNSFVYSKVIGLYRDNGMWKKAIGIIEEIREMGMPLDKHIYNSIIDTFGKYGELD 213
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A V +Q GITPD LI + AG KA F M+ GL P K + I+
Sbjct: 214 EALEVLSNMQQQGITPDIVTWNSLIRWHCKAGNLSKALELFSKMQAQGLYPDPKILVTII 273
Query: 353 SACEKENQLN 362
S ++ + N
Sbjct: 274 SRLAEQGKWN 283
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 103/233 (44%), Gaps = 11/233 (4%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
ES+ + I D K+ + A L M+ GF ++ T ++ G
Sbjct: 22 ESYNSCICDCCKV-------GDVDKAMTLLADMQSLGFHPSSLSYTCLIETLLSVGRTLE 74
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
AE ++E+ G + Y M+ +++ G+L E +LR +D ++ E Y+ LL
Sbjct: 75 AEALYQEMMCFGLKPRLKLYNIMLRGFLKKGLLRVAERVLRILDDLGLHRNQETYEILL- 133
Query: 284 GYSMN-GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
Y++N G E V ++ G ++ + + +I Y+ G +KA + +R+ G+
Sbjct: 134 DYNVNAGRLEDTWSVINEMKQKGFQLNSFVYSKVIGLYRDNGMWKKAIGIIEEIREMGM- 192
Query: 343 PSDKCV-ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
P DK + I+ K +L+ ALE L ++++ G +L W + G
Sbjct: 193 PLDKHIYNSIIDTFGKYGELDEALEVLSNMQQQGITPDIVTWNSLIRWHCKAG 245
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/187 (18%), Positives = 77/187 (41%)
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
K G++ A +++ LG SY ++ + G E L +EM + +
Sbjct: 33 KVGDVDKAMTLLADMQSLGFHPSSLSYTCLIETLLSVGRTLEAEALYQEMMCFGLKPRLK 92
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
+Y +LRG+ G A+RV + G+ + +L++ AG+ + ++ M
Sbjct: 93 LYNIMLRGFLKKGLLRVAERVLRILDDLGLHRNQETYEILLDYNVNAGRLEDTWSVINEM 152
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVV 396
++ G + + + ++ +A+ + ++ G + K ++ F + G +
Sbjct: 153 KQKGFQLNSFVYSKVIGLYRDNGMWKKAIGIIEEIREMGMPLDKHIYNSIIDTFGKYGEL 212
Query: 397 EEVEHVL 403
+E VL
Sbjct: 213 DEALEVL 219
>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
Length = 713
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 109/243 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + +I Y ++H + K ++ A L ++ + T T ++ Y K G+
Sbjct: 367 MVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGH 426
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ A E F+ IK G SY S++ +A ++ ++L EM A V Y A
Sbjct: 427 IQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPNERSYTA 486
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L GY+ G+ E A +F+ ++ + D L+ A +G Q+A FQ + AG
Sbjct: 487 LTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITDAG 546
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
L+ + +L ++ +L++A + L D+++ GF + + R G EEV
Sbjct: 547 LKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDTICYTSFIKACFRSGDTEEVT 606
Query: 401 HVL 403
L
Sbjct: 607 ETL 609
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 109/268 (40%), Gaps = 35/268 (13%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y I+ + K + A + L M + G +++ +++ Y++ G+ A + +E++
Sbjct: 309 YGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMV 368
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +V A+ +AG +D+ +L + A + E Y ++L GY G+ +
Sbjct: 369 SAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQ 428
Query: 293 GAQRVFEAIQFAG-----------------------------------ITPDARMCALLI 317
A VF+ I+ AG + P+ R L
Sbjct: 429 KALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPNERSYTALT 488
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
Y AG +KA+ FQ M+K L +L AC K + RA+E + G
Sbjct: 489 EGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITDAGLK 548
Query: 378 VGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ CT+ + R G + + +L++
Sbjct: 549 HNRITYCTMLDGWARKGELSKARDLLKD 576
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 94/207 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y I+ Y + ++ E L M+ GF + T ++ +++ + + F +K
Sbjct: 239 YNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLK 298
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G +YG +V + +AG + + +L EMD V +Y ++ GY+ G+
Sbjct: 299 ACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFT 358
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +V+E + AG+ PD +L++A+ AG+ KA +N++ L P+ + IL
Sbjct: 359 AAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSIL 418
Query: 353 SACEKENQLNRALEFLIDLERDGFMVG 379
K + +ALE ++ G G
Sbjct: 419 DGYVKGGHIQKALEVFDRIKTAGLRPG 445
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 99/236 (41%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
EE F+ N+ YT +++G+ + + + +K G T +V +++KAGN+
Sbjct: 264 EEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMA 323
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A + EE+ G +K Y ++ Y R G + +M + + Y L+
Sbjct: 324 KALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILV 383
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
+ G + A V E IQ + P +++ Y G QKA F ++ AGL
Sbjct: 384 HAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLR 443
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
P +LS K Q+ A L ++ +G + + + L + R G VE+
Sbjct: 444 PGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEK 499
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 87/194 (44%), Gaps = 3/194 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N R YT + GY + ++ A MK+ D V ++ K+G ++ A E F
Sbjct: 480 NERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVF 539
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++I G ++ +Y +M+ + R G L + LL++M ++ + Y + ++ +
Sbjct: 540 QQITDAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDTICYTSFIKACFRS 599
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS---D 345
G++E ++ + +AR LI+ + A +A + ++ + +GL+
Sbjct: 600 GDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKASGLQLDSALS 659
Query: 346 KCVALILSACEKEN 359
C+ L +C +N
Sbjct: 660 NCLLSGLISCASQN 673
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/263 (19%), Positives = 112/263 (42%), Gaps = 21/263 (7%)
Query: 116 ETGNLSDLLAAWVRF---MKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRD 172
E G+ SD AA RF M+ +W ++ ++++ P+ +R+
Sbjct: 92 EYGDCSDEPAAQ-RFRETMEIDAGNWHKIVNAFQVIDKPV-----------------LRE 133
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ Y + A T AM+ + T ++ Y++A +++ A EE+
Sbjct: 134 YGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEML 193
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G L++ + S++ Y AG + E + A+ + G VY ++++ Y GN E
Sbjct: 194 SQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNME 253
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
+ + ++ G + + ++N + +K + F ++ GL P+ I+
Sbjct: 254 TVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIV 313
Query: 353 SACEKENQLNRALEFLIDLERDG 375
K + +AL+ L ++++ G
Sbjct: 314 KLFTKAGNMAKALDILEEMDKHG 336
>gi|255661204|gb|ACU25771.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 426
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 102/212 (48%), Gaps = 4/212 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M G + +T + ++ ++ K G L
Sbjct: 213 KNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHNXGIEPNAITYSTIISIWGKVGKLDR 272
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ Y +M++AY RAG++ + LL E+ + + + +L
Sbjct: 273 AAXLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDTAXHILA 331
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + + +I+ + + F MR G P
Sbjct: 332 G---AGRIEEATWVFRQAIDAGEVKDITVFSRMIDLFSKYKKYANVVEVFDKMRGLGYFP 388
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDG 375
+AL+L+A K ++ ++A ++++ +G
Sbjct: 389 DSNVIALVLNAYGKLHEFDKAHXVYMNMQDEG 420
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 76/172 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ +A + L M++ D V + ++ + K + A F +K
Sbjct: 12 YSTLITHFGKEGLFDDALSWLQXMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 71
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y SM+ + +A + L+ EM V + Y LL Y N
Sbjct: 72 RSGITPDXVAYNSMINVFGKAKLFKEARSLISEMKTAGVXPDTVSYSTLLTMYVENQKFL 131
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF ++ + D C ++I+ Y +++A F +MRK G+EP+
Sbjct: 132 EALSVFAEMREIKCSLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKIGIEPN 183
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 96/233 (41%), Gaps = 4/233 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ ++ Y + + A + M+ D T +M+ +Y + K A++ F ++
Sbjct: 117 YSTLLTMYVENQKFLEALSVFAEMREIKCSLDLTTCNIMIDVYGQLDMAKEADKLFWSMR 176
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+G + SY +++ Y A + L R M + + Y ++ Y E
Sbjct: 177 KIGIEPNVISYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHE 236
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + + GI P+A + +I+ + G+ +A FQ +R +G+E ++
Sbjct: 237 KANNLIQEMHNXGIEPNAITYSTIISIWGKVGKLDRAAXLFQKLRSSGVEIDQVLYQTMI 296
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
A E+ + A L +L+R + A LA G +EE V R+
Sbjct: 297 VAYERAGLVAHAKRLLHELKRPDNIPRDTAXHILAG----AGRIEEATWVFRQ 345
Score = 38.1 bits (87), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 29/148 (19%), Positives = 63/148 (42%), Gaps = 8/148 (5%)
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
++ +Y +++ + + G+ D L+ M+ V +Y L+ + A +F
Sbjct: 8 ERYTYSTLITHFGKEGLFDDALSWLQXMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
++ +GITPD +IN + A ++A + M+ AG+ P + +L+ +
Sbjct: 68 SRLKRSGITPDXVAYNSMINVFGKAKLFKEARSLISEMKTAGVXPDTVSYSTLLTMYVEN 127
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTL 386
+ AL ++ +E C+L
Sbjct: 128 QKFLEALSVFAEM--------REIKCSL 147
>gi|224097576|ref|XP_002310993.1| predicted protein [Populus trichocarpa]
gi|222850813|gb|EEE88360.1| predicted protein [Populus trichocarpa]
Length = 877
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 107/241 (44%), Gaps = 6/241 (2%)
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
R++ ++ Y ++ + A T +M+ RG T ++ Y+ +++ A +
Sbjct: 303 REFGLMVGYYARRGDMHRARQTFESMRVRGIYPSSHVYTSLIHAYAVGRDMEEALSCVRK 362
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGM------LDRGEVLLREMDAQEVYVGSEVYKALLRG 284
+K G + +Y +V + + G +DR E L+REM+ + + ++Y ++ G
Sbjct: 363 MKEEGVEMSLVTYSIVVGGFAKIGNADQSCNMDRAESLVREMEEEGIDAPIDIYHTMMNG 422
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
Y+M GN E VF+ ++ G P LIN Y G+ KA + M AG++ +
Sbjct: 423 YTMIGNEEKCLIVFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSKMMESAGIKHN 482
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
K +++++ K A D+ +DG + F +G ++ H+++
Sbjct: 483 MKTYSMLINGFLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVK 542
Query: 405 E 405
E
Sbjct: 543 E 543
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 101/230 (43%), Gaps = 1/230 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+ + ++ G +K Q++ A L M G D+ T T ++ Y+ G+ A E F
Sbjct: 587 TVHTFNALVLGLVEKRQMEKAVEILDEMALAGVSPDEHTYTTIMNGYAALGDTGKAFEYF 646
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+++ G LD +Y +++ A ++G + + REM AQ + + VY L+ G++
Sbjct: 647 TKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTREMSAQNIPRNTFVYNILIDGWARR 706
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G+ A + + ++ G+ PD INA AG +A Q M G++P+ K
Sbjct: 707 GDVWEAADLMQQMKQEGVQPDIHTYTSFINACCKAGDMLRATKTIQEMEALGVKPNVKTY 766
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEA-SCTLAAWFKRLGVVE 397
++ + +AL +++ G K C + + R V E
Sbjct: 767 TTLIHGWACASLPEKALRCFEEMKLAGLKPDKAVYHCLMTSLLSRATVAE 816
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 82/197 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N++ Y+ +I+G+ K NA + + G D V ++ + GN+ A
Sbjct: 482 NMKTYSMLINGFLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMV 541
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E++ R++ ++ + RAG + R + M + AL+ G
Sbjct: 542 KEMQKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEK 601
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + + AG++PD ++N Y G + KA+ F +R GLE
Sbjct: 602 RQMEKAVEILDEMALAGVSPDEHTYTTIMNGYAALGDTGKAFEYFTKLRNEGLELDVFTY 661
Query: 349 ALILSACEKENQLNRAL 365
+L AC K ++ AL
Sbjct: 662 EALLKACCKSGRMQSAL 678
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 106/236 (44%), Gaps = 8/236 (3%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR---GFICDQVTLTVMVVMYSKAG 219
EE +A I Y +++GY I N E L+ KR GF ++ ++ MY+K G
Sbjct: 406 EEGIDAPIDIYHTMMNGY---TMIGNEEKCLIVFKRLKECGFAPSVISYGCLINMYTKMG 462
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ A E + ++ G + ++Y ++ +++ + ++ + +Y
Sbjct: 463 KVSKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWTNAFTVFEDVIKDGLKPDVVLYN 522
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
+++ + GN + A + + +Q P +R +I+ + AG+ ++A F MR++
Sbjct: 523 NIIKAFCGMGNMDRAIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRS 582
Query: 340 GLEPSDKCV-ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
G P+ AL+L EK Q+ +A+E L ++ G + T+ + LG
Sbjct: 583 GCIPTVHTFNALVLGLVEKR-QMEKAVEILDEMALAGVSPDEHTYTTIMNGYAALG 637
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 91/219 (41%), Gaps = 6/219 (2%)
Query: 163 EESFEANIRDYTKIIHGYGK------KMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS 216
EE E ++ Y+ ++ G+ K + AE+ + M+ G M+ Y+
Sbjct: 365 EEGVEMSLVTYSIVVGGFAKIGNADQSCNMDRAESLVREMEEEGIDAPIDIYHTMMNGYT 424
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
GN + F+ +K G SYG ++ Y + G + + + + M++ + +
Sbjct: 425 MIGNEEKCLIVFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSKMMESAGIKHNMK 484
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
Y L+ G+ + A VFE + G+ PD + +I A+ G +A + M
Sbjct: 485 TYSMLINGFLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEM 544
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+K P+ + I+ + ++ RALE + R G
Sbjct: 545 QKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSG 583
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 77/170 (45%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E E ++ Y ++ K ++Q+A M + + +++ +++ G+
Sbjct: 649 LRNEGLELDVFTYEALLKACCKSGRMQSALAVTREMSAQNIPRNTFVYNILIDGWARRGD 708
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + +++K G D +Y S + A +AG + R ++EM+A V + Y
Sbjct: 709 VWEAADLMQQMKQEGVQPDIHTYTSFINACCKAGDMLRATKTIQEMEALGVKPNVKTYTT 768
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAY 330
L+ G++ E A R FE ++ AG+ PD + L+ + +AY
Sbjct: 769 LIHGWACASLPEKALRCFEEMKLAGLKPDKAVYHCLMTSLLSRATVAEAY 818
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 78/205 (38%), Gaps = 45/205 (21%)
Query: 213 VMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY 272
V+ ++ N + FE IK +P +R +G MV Y R G + R M + +Y
Sbjct: 279 VLDTQPENWQAVVSAFERIK---KPA-RREFGLMVGYYARRGDMHRARQTFESMRVRGIY 334
Query: 273 VGSEVYKALLRGYSMN-----------------------------------GNSEG---- 293
S VY +L+ Y++ GN++
Sbjct: 335 PSSHVYTSLIHAYAVGRDMEEALSCVRKMKEEGVEMSLVTYSIVVGGFAKIGNADQSCNM 394
Query: 294 --AQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALI 351
A+ + ++ GI + ++N Y M G +K F+ +++ G PS +
Sbjct: 395 DRAESLVREMEEEGIDAPIDIYHTMMNGYTMIGNEEKCLIVFKRLKECGFAPSVISYGCL 454
Query: 352 LSACEKENQLNRALEFLIDLERDGF 376
++ K ++++ALE +E G
Sbjct: 455 INMYTKMGKVSKALEVSKMMESAGI 479
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 92/199 (46%), Gaps = 1/199 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+LE+ + Y ++ G+ +K + ++ M R+G + + T ++ + K G+
Sbjct: 183 MLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGD 242
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A F E++ LG P D SY +++ G + LLREM V Y
Sbjct: 243 MVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNI 302
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ GYS +G + A ++F I +G+ PDA + +I+ AG+ A+ F++M G
Sbjct: 303 LIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANG 362
Query: 341 LEPSDKCV-ALILSACEKE 358
P V L++ C E
Sbjct: 363 SAPDAAVVIPLVIGLCRGE 381
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 97/224 (43%), Gaps = 2/224 (0%)
Query: 155 QVAEL--ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMV 212
+ AEL +++ + N+ Y ++ G K +++ A + M RG D V V++
Sbjct: 105 EAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLI 164
Query: 213 VMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY 272
+SK G++ A FEE+ G +Y S++ + R G R + L ++M Q
Sbjct: 165 DGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCV 224
Query: 273 VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTA 332
+ LL G+ G+ A R+F ++ G PD LI G+ +A
Sbjct: 225 PNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRL 284
Query: 333 FQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+ M ++G+ P +++ K L+ A++ ++ + G
Sbjct: 285 LREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGL 328
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/176 (19%), Positives = 71/176 (40%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y ++ + + + A + M +G + + ++++ + + A E
Sbjct: 51 NTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELL 110
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E+ G + +YGS++ + G L L M + VY L+ G+S
Sbjct: 111 NEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKK 170
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
G+ A R+FE + G P L++ + G+ + + F++M + G P+
Sbjct: 171 GDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPN 226
>gi|255539196|ref|XP_002510663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551364|gb|EEF52850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 695
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 96/203 (47%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ E +++ II G+ K A L ++ G TL ++ +G +
Sbjct: 250 DKLELDVQLSNDIIVGFAKAGDPNKAMEFLGMVQASGLSPRTATLIAVISALGDSGRIIE 309
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
AE FEE+K G R+Y ++ YV+AGML E ++ EM+ V Y L+
Sbjct: 310 AEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDAEFIVSEMERSGVSPDECTYSLLID 369
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
YS G E A+ V + ++ I P++ + + ++ +Y+ G+ QK++ + M+ +G+ P
Sbjct: 370 AYSNAGRWESARIVLKEMEANNIMPNSYVFSRILASYRDRGEWQKSFQVLKEMKNSGVRP 429
Query: 344 SDKCVALILSACEKENQLNRALE 366
+++ K + L+ A++
Sbjct: 430 DRHFYNVMIDTFGKFSCLDHAMD 452
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 89/202 (44%), Gaps = 2/202 (0%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
+I G +I AE MK G ++ Y KAG LK AE E++ G
Sbjct: 297 VISALGDSGRIIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDAEFIVSEMERSG 356
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
D+ +Y ++ AY AG + ++L+EM+A + S V+ +L Y G + +
Sbjct: 357 VSPDECTYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRILASYRDRGEWQKSF 416
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
+V + ++ +G+ PD ++I+ + A F M G++P D L C
Sbjct: 417 QVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQP-DTVTWNTLIDC 475
Query: 356 EKENQLN-RALEFLIDLERDGF 376
+ +L+ RA E ++ GF
Sbjct: 476 HCKAELHERAEELFEEMMEKGF 497
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 78/172 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I +GK + +A +T M G D VT ++ + KA + AEE FEE+
Sbjct: 434 YNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAELHERAEELFEEMM 493
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G ++ M+ ++ D + L+ M + + Y L+ Y +G
Sbjct: 494 EKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNVVTYTTLIDIYGKSGRFS 553
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A E ++ AG+ P + M LINAY G S++A AF+ MR L+PS
Sbjct: 554 DAIECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRLMRADSLKPS 605
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 13/224 (5%)
Query: 131 MKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAE 190
+ PR A +AV+ L + + + + + R Y ++ GY K +++AE
Sbjct: 287 LSPRTATLIAVISALGDSGRIIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDAE 346
Query: 191 NTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAY 250
+ M+R G D+ T ++++ YS AG + A +E++ + SY V +
Sbjct: 347 FIVSEMERSGVSPDECTYSLLIDAYSNAGRWESARIVLKEME--ANNIMPNSY---VFSR 401
Query: 251 VRAGMLDRGE-----VLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAG 305
+ A DRGE +L+EM V Y ++ + + A F+ + G
Sbjct: 402 ILASYRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEG 461
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
I PD LI+ + A ++A F+ M + G P CV
Sbjct: 462 IQPDTVTWNTLIDCHCKAELHERAEELFEEMMEKGFSP---CVT 502
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 86/194 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E+ F + + +I+ +G++ + + + + M+ G + + VT T ++ +Y K+G
Sbjct: 492 MMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNVVTYTTLIDIYGKSGR 551
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A E E++K G Y +++ AY + G+ ++ R M A + +
Sbjct: 552 FSDAIECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRLMRADSLKPSLLALNS 611
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ + + A V + ++ + PD L+ A + K + ++ M AG
Sbjct: 612 LINAFGEDRRDAEAFSVLKYMKENDLKPDVVTYTTLMKALIRVDKFNKVPSVYEEMILAG 671
Query: 341 LEPSDKCVALILSA 354
P K A++ SA
Sbjct: 672 CTPDRKARAMLRSA 685
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 105/236 (44%), Gaps = 9/236 (3%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +IH G+ ++ A LL+ ++ +T ++ ++ +L+ A ++
Sbjct: 157 YSILIHALGRSEKLYEA--FLLSQQQ---ALSPLTYNALINACARNNDLEKAINLISRMR 211
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRG--EVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
G P D +Y ++ + VR+ +D + L E+ ++ + ++ ++ G++ G+
Sbjct: 212 QDGYPSDFVNYSLIIQSLVRSNRIDSPILQKLYSEIQCDKLELDVQLSNDIIVGFAKAGD 271
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
A +Q +G++P +I+A +G+ +A F+ M+ GL+P +
Sbjct: 272 PNKAMEFLGMVQASGLSPRTATLIAVISALGDSGRIIEAEAIFEEMKDNGLKPKTRAYNG 331
Query: 351 ILSACEKENQLNRALEFLI-DLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+L K L A EF++ ++ER G + L + G E VL+E
Sbjct: 332 LLKGYVKAGMLKDA-EFIVSEMERSGVSPDECTYSLLIDAYSNAGRWESARIVLKE 386
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 91/208 (43%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I+G+ + Q+ A N L M RG + VT T ++ KA + AE F
Sbjct: 202 NVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVF 261
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+++ G D +Y ++ Y+ G +L EM A + Y +LL N
Sbjct: 262 QQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNN 321
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G A+ F+++ GI P+ + +LI+ Y G + + M + GL P
Sbjct: 322 GRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIF 381
Query: 349 ALILSACEKENQLNRALEFLIDLERDGF 376
+I +A K+ ++ A+ +++ G
Sbjct: 382 NIIFTAYAKKAMIDEAMHIFNKMKQQGL 409
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 70/185 (37%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
L +++ + N+ YT +I G K + AE M +G D T ++ Y
Sbjct: 227 LEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSI 286
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
G K EE+ G D +YGS++ G M + + +Y
Sbjct: 287 GKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIY 346
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
L+ GY+ G + + G++PD + ++ AY +A F M++
Sbjct: 347 GILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQ 406
Query: 339 AGLEP 343
GL P
Sbjct: 407 QGLSP 411
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 96/246 (39%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+++ + + N+ Y +IHGY K + + L M G D ++ Y+K
Sbjct: 333 SMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKA 392
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ A F ++K G D ++G+++ A + G +D + +M + V V+
Sbjct: 393 MIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFN 452
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
+L+ G E A+ + + GI PD ++ GQ KA M +
Sbjct: 453 SLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERV 512
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEV 399
G P ++ +++ A + L + G + TL + R G +++
Sbjct: 513 GTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDA 572
Query: 400 EHVLRE 405
V RE
Sbjct: 573 YGVFRE 578
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 83/219 (37%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E + + I Y KK I A + MK++G D V ++ K G
Sbjct: 369 MVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGR 428
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A F ++ G + + S+V ++ + EM Q + +
Sbjct: 429 VDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNT 488
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+L G AQR+ + ++ G PD LI + + G+ +A + M G
Sbjct: 489 ILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVG 548
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
L+P + +L + +++ A ++ R+G G
Sbjct: 549 LKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPG 587
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 100/252 (39%), Gaps = 5/252 (1%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ E NI + +++G + + A+ M +G D V ++ G
Sbjct: 439 MMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQ 498
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A+ + ++ +G D SY +++ + G +D L M + + Y
Sbjct: 499 VMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNT 558
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL GY G + A VF + GITP + +++ + +A + NM +G
Sbjct: 559 LLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSG 618
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEA-SCTLAAWFKRLGVVEEV 399
+ + +IL+ K N ++ A + L F + + + A FK G E+
Sbjct: 619 KQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKS-GRNEDA 677
Query: 400 EHV---LREYGL 408
H+ + YGL
Sbjct: 678 MHLFATISSYGL 689
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/229 (17%), Positives = 87/229 (37%), Gaps = 4/229 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++HGY + +I +A M R G VT + ++ A+E + +
Sbjct: 556 YNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMI 615
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G+ + Y ++ + +D L + + +++ + + ++ +G +E
Sbjct: 616 TSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNE 675
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +F I G+ PD L+ G ++ F M K+G P+ + + ++
Sbjct: 676 DAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALV 735
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEH 401
+ RA +L L+ F + + L + R +E H
Sbjct: 736 RRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLISLLSR----DEYHH 780
>gi|449461223|ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
gi|449507064|ref|XP_004162923.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
Length = 844
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 105/234 (44%), Gaps = 1/234 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLL-AMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEI 231
Y ++ YGK + + LL M+ G D+ T + ++ + G + A+E F E+
Sbjct: 270 YNVMLDVYGKMGRSWDKILDLLDEMRNEGLQFDEFTCSTVISACGREGLINEAKEFFVEL 329
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
K G +Y +++ + +AG+ +L+EM+ + S Y L+ Y G
Sbjct: 330 KSSGYEPGTVTYNALLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNELVAAYVRAGFY 389
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALI 351
E V + + G+ P+A +INAY AG+ KA F M+K+G P+ I
Sbjct: 390 EEGATVIDTMTRKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSI 449
Query: 352 LSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
L+ K+++ ++ L D+ +G + TL A G + V HV RE
Sbjct: 450 LALLGKKSRSEEMIKILSDMRINGCPPNRITWNTLLAMCGDKGKHKFVNHVFRE 503
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 95/221 (42%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKL 233
+ +I G++ I A+ + +K G+ VT ++ ++ KAG A +E++
Sbjct: 307 STVISACGREGLINEAKEFFVELKSSGYEPGTVTYNALLQVFGKAGIYSEALNILKEMED 366
Query: 234 LGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEG 293
LD +Y +V AYVRAG + G ++ M + V + Y ++ Y G
Sbjct: 367 NNCTLDSVTYNELVAAYVRAGFYEEGATVIDTMTRKGVMPNAVTYTTVINAYGRAGKEVK 426
Query: 294 AQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILS 353
A ++F ++ +G P+ ++ +S++ +MR G P+ +L+
Sbjct: 427 ALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRINGCPPNRITWNTLLA 486
Query: 354 ACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
C + + +++ GF GK+ TL + + R G
Sbjct: 487 MCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAYGRCG 527
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS-QKAYTAFQNMRK 338
+L YS NG + A +FE ++ G++P ++++ Y G+S K MR
Sbjct: 237 TILHAYSRNGKYKQAIAMFERMKDCGLSPSLVTYNVMLDVYGKMGRSWDKILDLLDEMRN 296
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
GL+ + + ++SAC +E +N A EF ++L+ G+ G L F + G+ E
Sbjct: 297 EGLQFDEFTCSTVISACGREGLINEAKEFFVELKSSGYEPGTVTYNALLQVFGKAGIYSE 356
Query: 399 VEHVLRE 405
++L+E
Sbjct: 357 ALNILKE 363
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 86/198 (43%), Gaps = 1/198 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N YT +I+ YG+ + A MK+ G + + T ++ + K + +
Sbjct: 407 NAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKIL 466
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++++ G P ++ ++ +++ G + REM G + + L+ Y
Sbjct: 467 SDMRINGCPPNRITWNTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAYGRC 526
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G+ A ++++ + AG TP A L+NA G + A + +MR G +P++
Sbjct: 527 GSELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSF 586
Query: 349 ALILSACEKENQLNRALE 366
+L+L K + R LE
Sbjct: 587 SLMLHCYAKGGNV-RGLE 603
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/249 (18%), Positives = 108/249 (43%), Gaps = 12/249 (4%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ F Y +++ ++ + AE+ LL M+ +GF ++ + ++M+ Y+K GN
Sbjct: 539 MMKAGFTPCATTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGN 598
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGS------MVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
++ E ++I D + + S +++A + + E E+
Sbjct: 599 VRGLERIGKDI------YDGQIFPSWVLLRTLILANFKCRAVRGMERAFEELMKNGYKPD 652
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
++ ++L ++ N E AQ++ + I+ +G+ PD L+N Y G+ KA +
Sbjct: 653 MVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYARRGECWKAEEILK 712
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
+ K+G P I+ ++ + A+ + ++ G T + + G
Sbjct: 713 GLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTRGICPCIFTYNTFVSGYAGRG 772
Query: 395 VVEEVEHVL 403
+ EV+ V+
Sbjct: 773 MFAEVDEVI 781
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 90/233 (38%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +++ Y + + + M R+G + + VT T ++ Y +AG A + F ++K
Sbjct: 376 YNELVAAYVRAGFYEEGATVIDTMTRKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQMK 435
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +Y S++ + + +L +M + LL G +
Sbjct: 436 KSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRINGCPPNRITWNTLLAMCGDKGKHK 495
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
VF ++ G P LI+AY G A + M KAG P +L
Sbjct: 496 FVNHVFREMKNCGFEPGKDTFNTLISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALL 555
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+A + A L+D+ GF + + + + + G V +E + ++
Sbjct: 556 NALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRGLERIGKD 608
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/169 (19%), Positives = 72/169 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L++ ++ ++ + ++ + K + A+ L ++ G D VT ++ MY++ G
Sbjct: 644 LMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYARRGE 703
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
AEE + + GE D SY +++ + R G++ ++ EM + + Y
Sbjct: 704 CWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTRGICPCIFTYNT 763
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
+ GY+ G V + P+ ++++ Y A + Q A
Sbjct: 764 FVSGYAGRGMFAEVDEVISYMIQKNCKPNELTYKIIVDGYCKARKYQDA 812
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 46/244 (18%), Positives = 101/244 (41%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
FE + +I YG+ +A M + GF T ++ ++ G+ K AE
Sbjct: 509 FEPGKDTFNTLISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAAE 568
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+++ G ++ S+ M+ Y + G + E + +++ +++ + + L+
Sbjct: 569 SVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRGLERIGKDIYDGQIFPSWVLLRTLILAN 628
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
G +R FE + G PD + +++ + ++A +R++GL+P
Sbjct: 629 FKCRAVRGMERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDL 688
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+++ + + +A E L L + G + T+ F R G+++E V+ E
Sbjct: 689 VTYNSLMNMYARRGECWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSE 748
Query: 406 YGLR 409
R
Sbjct: 749 MTTR 752
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I+G+ + Q+ A N L M RG + VT T ++ KA + AE F
Sbjct: 202 NVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVF 261
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+++ G D +Y ++ Y+ G +L EM A + Y +LL N
Sbjct: 262 QQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNN 321
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G A+ +F+++ GI P+ + +LI+ Y G + + M + GL P
Sbjct: 322 GRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIF 381
Query: 349 ALILSACEKENQLNRALEFLIDLERDGF 376
+I +A K+ ++ A+ +++ G
Sbjct: 382 NIIFTAYAKKAMIDEAMHIFNKMKQQGL 409
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 71/185 (38%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
L +++ + N+ YT +I G K + AE M +G D T ++ Y
Sbjct: 227 LEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSI 286
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
G K EE+ G D +YGS++ G L M + + +Y
Sbjct: 287 GKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIY 346
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
L+ GY+ G + + G++PD + ++ AY +A F M++
Sbjct: 347 GILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQ 406
Query: 339 AGLEP 343
GL P
Sbjct: 407 QGLSP 411
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 96/246 (39%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+++ + + N+ Y +IHGY K + + L M G D ++ Y+K
Sbjct: 333 SMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKA 392
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ A F ++K G D +YG+++ A + G +D + +M + V V+
Sbjct: 393 MIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFN 452
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
+L+ G E A+ + + GI PD ++ GQ KA M +
Sbjct: 453 SLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERV 512
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEV 399
G P ++ +++ A + L + G + TL + R G +++
Sbjct: 513 GTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDA 572
Query: 400 EHVLRE 405
V RE
Sbjct: 573 YGVFRE 578
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/240 (17%), Positives = 104/240 (43%), Gaps = 3/240 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAM-KRRGFIC--DQVTLTVMVVMYSKAGNLKMAE 225
++ Y ++ G+ + + + A L M +G C + V+ +++ + G + A
Sbjct: 164 DVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAY 223
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E+ G + +Y +++ +A ++DR E + ++M + V ++ Y L+ GY
Sbjct: 224 NLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGY 283
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
G + R+ E + G+ PD L+N G+ ++A F +M + G++P+
Sbjct: 284 LSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNV 343
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+++ + L+ + L + +G + + + +++E H+ +
Sbjct: 344 AIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNK 403
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/229 (17%), Positives = 87/229 (37%), Gaps = 4/229 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++HGY + +I +A M R G VT + ++ A+E + +
Sbjct: 556 YNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMI 615
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G+ + Y ++ + +D L + + +++ + + ++ +G +E
Sbjct: 616 TSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNE 675
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +F I G+ PD L+ G ++ F M K+G P+ + + ++
Sbjct: 676 DAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALV 735
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEH 401
+ RA +L L+ F + + L + R +E H
Sbjct: 736 RRLLHRGDITRAGAYLCKLDEKNFSLEASTTAMLISLLSR----DEYHH 780
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 42/219 (19%), Positives = 82/219 (37%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E + + I Y KK I A + MK++G D V ++ K G
Sbjct: 369 MVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGR 428
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A F ++ G + + S+V ++ + EM Q + +
Sbjct: 429 VDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNT 488
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+L G AQR+ + ++ G P LI + + G+ +A + M G
Sbjct: 489 ILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVG 548
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
L+P + +L + +++ A ++ R+G G
Sbjct: 549 LKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPG 587
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 99/252 (39%), Gaps = 5/252 (1%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ E NI + +++G + + A+ M +G D V ++ G
Sbjct: 439 MMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQ 498
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A+ + ++ +G SY +++ + G +D L M + + Y
Sbjct: 499 VMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNT 558
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL GY G + A VF + GITP + +++ + +A + NM +G
Sbjct: 559 LLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSG 618
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEA-SCTLAAWFKRLGVVEEV 399
+ + +IL+ K N ++ A + L F + + + A FK G E+
Sbjct: 619 KQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKS-GRNEDA 677
Query: 400 EHV---LREYGL 408
H+ + YGL
Sbjct: 678 MHLFATISSYGL 689
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 39/213 (18%), Positives = 83/213 (38%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
++ ++ +Y +I K ++ +A M G + +V +
Sbjct: 406 QQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWE 465
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A+E + E+ G D + +++ G + + + L+ M+ G Y L+
Sbjct: 466 KAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLI 525
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G+ + G + A + + + G+ PD L++ Y AG+ AY F+ M + G+
Sbjct: 526 GGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGIT 585
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDG 375
P + IL + + A E +++ G
Sbjct: 586 PGVVTYSTILHGLFTTRRFSEAKELYLNMITSG 618
>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
Length = 687
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 110/252 (43%), Gaps = 3/252 (1%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
A+ E AN+ ++ + + K+ ++ A M+ RG ++ T T ++ KAG
Sbjct: 283 AMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAG 342
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
L A +E+ G PL+ +Y +V + + E +LR M+ V +Y
Sbjct: 343 RLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYT 402
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ G+ MN NSE A + ++ G+ D + LI + +A + M ++
Sbjct: 403 TLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDES 462
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE- 398
GLEP+ ++ AC K ++ A+ L + GF C L + G ++E
Sbjct: 463 GLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEA 522
Query: 399 VEHV--LREYGL 408
+ H +R+ GL
Sbjct: 523 ISHFNKMRDLGL 534
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 93/212 (43%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ YT ++ G K+ ++ AE+ L M++ G +++ T ++ + N + A
Sbjct: 362 NVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLL 421
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E+K G LD YG+++ LD + LL +MD + +Y ++ +
Sbjct: 422 SEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKS 481
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G A + + I +G P+ LI+ AG +A + F MR GL+P+ +
Sbjct: 482 GKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAY 541
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGK 380
++ K LN A++ ++ G + K
Sbjct: 542 TALVDGLCKNGCLNEAVQLFNEMVHKGMSLDK 573
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 74/178 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L+ F+ N+ Y +I G K I A + M+ G + T +V K G
Sbjct: 494 ILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGC 553
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A + F E+ G LDK Y +++ Y++ G L L +M + + Y
Sbjct: 554 LNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTC 613
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
+ G+ A+ VF + GI PD + LI+ YQ G ++A + M +
Sbjct: 614 FISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEMER 671
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 87/211 (41%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E E N YT ++ K ++ A L + GF + +T ++ KAG++
Sbjct: 461 ESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSID 520
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A F +++ LG + ++Y ++V + G L+ L EM + + + VY ALL
Sbjct: 521 EAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALL 580
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
GY GN A + + +G+ D I+ + +A F M G+
Sbjct: 581 DGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIA 640
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLER 373
P ++S +K L A+ ++ER
Sbjct: 641 PDRAVYNCLISKYQKLGNLEEAISLQDEMER 671
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 98/244 (40%), Gaps = 4/244 (1%)
Query: 159 LALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
L LL E E +I Y +I G ++ A++ L M G + + T M+
Sbjct: 418 LGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDA 477
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
K+G + A ++I G + +Y +++ +AG +D +M +
Sbjct: 478 CFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPN 537
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+ Y AL+ G NG A ++F + G++ D + L++ Y G A+
Sbjct: 538 VQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKA 597
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
M +GL+ C +S N + A E ++ G + L + +++LG
Sbjct: 598 KMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLG 657
Query: 395 VVEE 398
+EE
Sbjct: 658 NLEE 661
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/215 (19%), Positives = 87/215 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E+ N+ + +I K+ ++ A + MK G + D VT ++ Y K G
Sbjct: 179 LFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGE 238
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L E+ EE++ G D +Y +++ + + G ++ M + V +
Sbjct: 239 LDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFST 298
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+ + G A ++F ++ G+ + LI+ AG+ A M + G
Sbjct: 299 FVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQG 358
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+ + +++ KE ++ A + L +E+ G
Sbjct: 359 VPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAG 393
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 45/233 (19%), Positives = 98/233 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I G K ++ +A L M R+G + VT TV+V K + AE+ ++
Sbjct: 331 YTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMME 390
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G ++ Y +++ + ++ LL EM + + + +Y AL++G +
Sbjct: 391 KAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLD 450
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ + + +G+ P+ + +++A +G+ +A Q + +G +P+ ++
Sbjct: 451 EAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALI 510
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
K ++ A+ + G +A L + G + E + E
Sbjct: 511 DGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNE 563
>gi|356562783|ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 859
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 97/210 (46%), Gaps = 1/210 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++EE+ E N+ Y +I GK ++A+ LL M +G + T ++ + +A
Sbjct: 408 MVEENVEPNMETYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAAL 467
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A F + +G +Y S + A+ R G+ E +L M+ + +
Sbjct: 468 YEEALVVFNTMNEVGSNPTVETYNSFIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNG 527
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+++ + G E A + + ++ A P+ ++++ Y AG ++ FQ ++ +G
Sbjct: 528 VIKAFRQGGQYEEAVKSYVEMEKANCEPNELTLEVVLSVYCSAGLVDESEEQFQEIKASG 587
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLID 370
+ PS C L+L+ K ++LN A LID
Sbjct: 588 ILPSVMCYCLMLALYAKNDRLNDAYN-LID 616
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 110/285 (38%), Gaps = 19/285 (6%)
Query: 137 DWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAM 196
DW +L M H E + ++ Y ++ + AE M
Sbjct: 222 DWEGLLGLFAEMRH-------------EGIQPDVITYNTLLGACAHRGLGDEAEMVFRTM 268
Query: 197 KRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGML 256
G + D T + +V + K L+ E E++ G D SY ++ AY G +
Sbjct: 269 NESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVLLEAYAELGSI 328
Query: 257 DRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALL 316
+ R+M A + Y LL Y +G + + +F ++ + PDA +L
Sbjct: 329 KEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGTYNIL 388
Query: 317 INAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
I + G ++ T F +M + +EP+ + ++ AC K A + L+ + G
Sbjct: 389 IQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLYEDAKKILLHMNEKGI 448
Query: 377 MVGKEASCTLAAWFKRLGVVEE---VEHVLREYGLR---ETYSKI 415
+ +A + F + + EE V + + E G ETY+
Sbjct: 449 VPSSKAYTGVIEAFGQAALYEEALVVFNTMNEVGSNPTVETYNSF 493
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/287 (19%), Positives = 113/287 (39%), Gaps = 28/287 (9%)
Query: 112 CVSPETGNLS--DLLAAWVRFMKPRRADWLAVLKQLKLM---------EHPLYLQVAELA 160
C+ P LS D + F + R DW L+ K M EH + + L
Sbjct: 90 CLDPFKNKLSLNDFALVFKEFAQ--RGDWQRSLRLFKYMQRQIWCKPNEHIYTIMITLLG 147
Query: 161 ---LLEESFEA-----------NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQV 206
LL++ E + YT +I+ YG+ Q + L MK+ +
Sbjct: 148 REGLLDKCREVFDEMPSNGVARTVYVYTAVINAYGRNGQFHASLELLNGMKQERVSPSIL 207
Query: 207 TLTVMVVMYSKAG-NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLRE 265
T ++ ++ G + + F E++ G D +Y +++ A G+ D E++ R
Sbjct: 208 TYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRT 267
Query: 266 MDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQ 325
M+ + Y L++ + E + ++ G PD +L+ AY G
Sbjct: 268 MNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVLLEAYAELGS 327
Query: 326 SQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLE 372
++A F+ M+ AG + +++L+ K + + + ++++
Sbjct: 328 IKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMK 374
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 77/182 (42%), Gaps = 1/182 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E + ++ + +I + + Q + A + + M++ +++TL V++ +Y AG +
Sbjct: 515 ESGLKRDVHSFNGVIKAFRQGGQYEEAVKSYVEMEKANCEPNELTLEVVLSVYCSAGLVD 574
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
+EE F+EIK G Y M+ Y + L+ L+ EM V + ++
Sbjct: 575 ESEEQFQEIKASGILPSVMCYCLMLALYAKNDRLNDAYNLIDEMITMRVSDIHQGIGQMI 634
Query: 283 RG-YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+G + N + + VF+ + G R L+ A Q ++A K GL
Sbjct: 635 KGDFDDESNWQIVEYVFDKLNSEGCGLGMRFYNALLEALWWMFQRERAARVLNEASKRGL 694
Query: 342 EP 343
P
Sbjct: 695 FP 696
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 114/258 (44%), Gaps = 13/258 (5%)
Query: 153 YLQVAELALLEESFEA----NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTL 208
Y+Q + E FEA N+ + +I GY + I A N M +R D ++
Sbjct: 307 YVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQR----DSISW 362
Query: 209 TVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
++ Y+++G + A F E+K GE L++ ++ S + L+ G+ + +
Sbjct: 363 AAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVK 422
Query: 269 QEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
+ G V ALL Y GN + A VFE I+ + M A Y G ++
Sbjct: 423 AGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIA----GYARHGFGKE 478
Query: 329 AYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD-GFMVGKEASCTLA 387
A F++M+K G+ P D + +LSAC +++ E+ + +D G + +
Sbjct: 479 ALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMI 538
Query: 388 AWFKRLGVVEEVEHVLRE 405
R G +++ +++++
Sbjct: 539 DLLGRAGRLDDAQNLMKN 556
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 92/218 (42%), Gaps = 26/218 (11%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E + + + ++ GY K+ ++ +A M R D+V+ M+ Y++ G
Sbjct: 195 LFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPER----DEVSWNTMISGYAQNGE 250
Query: 221 LKMAEETFEEIKLLGEPL-DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
L A+ FEE P+ D ++ +MV YV+ GMLD + M + S +
Sbjct: 251 LLEAQRLFEE-----SPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKN----SVSWN 301
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
A++ GY + A+ +FEA+ ++ M I Y G +A F M
Sbjct: 302 AIIAGYVQCKRMDQARELFEAMPCQNVSSWNTM----ITGYAQNGDIAQARNFFDRM--- 354
Query: 340 GLEPSDKCV--ALILSACEKENQLNRALEFLIDLERDG 375
P + A I++ + AL ++++RDG
Sbjct: 355 ---PQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDG 389
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 83/213 (38%), Gaps = 16/213 (7%)
Query: 209 TVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
++VMY K GN+ A FE I E + S+ +M+ Y R G +L M
Sbjct: 433 NALLVMYCKCGNIDDAYIVFEGI----EEKEVVSWNTMIAGYARHGFGKEALMLFESMKK 488
Query: 269 QEVYVGSEVYKALLRGYSMNG-NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQ 327
+ +L S G +G + + Q GIT +++ +I+ AG+
Sbjct: 489 TGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLD 548
Query: 328 KAYTAFQNMRKAGLEPSDKCVALILSACEKENQL---NRALEFLIDLERDGFMVGKEASC 384
A +NM EP +L A +A + + ++E D + S
Sbjct: 549 DAQNLMKNMP---FEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSN 605
Query: 385 TLAAWFKRLGVVEEVEHVLREYGLRETYSKIPG 417
AA R G V + +R+ G++ K+PG
Sbjct: 606 LYAA-SGRWGDVGRMRLRMRDRGVK----KVPG 633
>gi|242050480|ref|XP_002462984.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
gi|241926361|gb|EER99505.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
Length = 668
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 1/196 (0%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQV-TLTVMVVMYSKAGNLKMAEETFEEIK 232
T +I G ++ AE L G I + ++ Y + G+LK AE+ +E+
Sbjct: 267 TALISALGSAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMS 326
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D+ +Y +V AY RAG + +LL+EM+A V S V+ +L G+ G+ +
Sbjct: 327 QCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQ 386
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A V +Q +G+ PD ++I+ + A AF MR+ +EP ++
Sbjct: 387 KAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEEIEPDVVTWNTLI 446
Query: 353 SACEKENQLNRALEFL 368
A K + +RA+E
Sbjct: 447 DAHCKGGRHDRAMELF 462
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 100/233 (42%), Gaps = 10/233 (4%)
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
R Y ++ GY + ++NAE L M + G D+ T +++V Y++AG + A +E
Sbjct: 300 RAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKE 359
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGE-----VLLREMDAQEVYVGSEVYKALLRGY 285
++ D S V + + AG DRG+ +LREM A V Y ++ +
Sbjct: 360 MEA-----DGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTF 414
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
A F+ ++ I PD LI+A+ G+ +A F+ MR++ P
Sbjct: 415 GKYNCLGHAMDAFDRMREEEIEPDVVTWNTLIDAHCKGGRHDRAMELFEEMRESNCPPGT 474
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
++++ ++ + L +++ G + TL + R G +E
Sbjct: 475 TTYNIMINLLGEQERWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKE 527
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 107/249 (42%), Gaps = 6/249 (2%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+++I+ G+ + Q A L M+ G D+ VM+ + K L A + F+ ++
Sbjct: 372 FSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMR 431
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
D ++ +++ A+ + G DR L EM G+ Y ++ E
Sbjct: 432 EEEIEPDVVTWNTLIDAHCKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWE 491
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
G + + ++ G+ P+ L++ Y +G+ ++A + M+ GL+PS ++
Sbjct: 492 GVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALV 551
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWF---KRLGVVEEVEHVLREYGLR 409
+A + + AL + ++ DG V +L F +R+ V ++E GLR
Sbjct: 552 NAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMKENGLR 611
Query: 410 E---TYSKI 415
TY+ +
Sbjct: 612 PDVITYTTL 620
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 83/201 (41%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
EE E ++ + +I + K + A M+ T +M+ + + +
Sbjct: 432 EEEIEPDVVTWNTLIDAHCKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWE 491
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
E E+K G + +Y ++V Y R+G + M A + +Y AL+
Sbjct: 492 GVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALV 551
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
Y+ G ++ A V +A++ G+ + LINA+ + +A++ Q M++ GL
Sbjct: 552 NAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMKENGLR 611
Query: 343 PSDKCVALILSACEKENQLNR 363
P ++ A + Q ++
Sbjct: 612 PDVITYTTLMKALIRVEQFDK 632
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 67/171 (39%), Gaps = 2/171 (1%)
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
EP D + ++ A+ RA + D LL A + S AL+ G A+
Sbjct: 225 EP-DAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGSAGRVAEAE 283
Query: 296 RVFEAIQFAG-ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSA 354
+F AG I P R L+ Y G + A M + G+ P + +L++ A
Sbjct: 284 ALFLEFFLAGEIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDA 343
Query: 355 CEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ + A L ++E DG + A F+ G ++ VLRE
Sbjct: 344 YTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLRE 394
>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 108/243 (44%), Gaps = 4/243 (1%)
Query: 160 ALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
A+ EE F + R Y+ +IHG K +MK +G + D +++ +
Sbjct: 538 AMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGF 597
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
K G + A + EE+K G +YGS++ + LD +L E ++ + +
Sbjct: 598 CKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNV 657
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
+Y +L+ G+ G + A + E + G+TP+ L++A A + +A FQ+
Sbjct: 658 VIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQS 717
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGV 395
M++ P+ ++++ K + N+A F ++++ G + T+ + + G
Sbjct: 718 MKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGN 777
Query: 396 VEE 398
+ E
Sbjct: 778 IAE 780
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 109/252 (43%), Gaps = 8/252 (3%)
Query: 159 LALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
L+LL+E S +A+I Y I +GK ++ A ++ G D+VT T M+ +
Sbjct: 223 LSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGV 282
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
KA L A E FE ++ +Y +M+M Y AG D LL A+
Sbjct: 283 LCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPS 342
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
Y +L G + A +VFE ++ P+ +LI+ AG+ A+
Sbjct: 343 VIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRD 401
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
+M+KAGL P+ + V +++ K +L+ A +++ + V T + LG
Sbjct: 402 SMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMD---YKVCTPDEITFCSLIDGLG 458
Query: 395 VVEEVEHVLREY 406
V V+ + Y
Sbjct: 459 KVGRVDDAYKVY 470
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 96/226 (42%), Gaps = 6/226 (2%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
L+ Q+ EL +E + +T +I G+ K+ ++ +A + L MK D V V
Sbjct: 190 LFQQMQELG-----YEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVC 244
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ + K G + MA + F EI+ G D+ +Y SM+ +A LD + ++
Sbjct: 245 IDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRR 304
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
+ Y ++ GY G + A + E + G P ++ + G+ +A
Sbjct: 305 VPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALK 364
Query: 332 AFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
F+ M+K P+ +++ + +L+ A E +++ G
Sbjct: 365 VFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLF 409
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 92/208 (44%), Gaps = 4/208 (1%)
Query: 161 LLEES----FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS 216
L EE+ E N+ Y+ +I G+GK +I A L + ++G + T ++
Sbjct: 644 LFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALV 703
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
KA + A F+ +K L ++ +YG ++ + ++ V +EM Q + +
Sbjct: 704 KAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTI 763
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
Y ++ G + GN A +F+ + G PD+ +I ++ A++ F+
Sbjct: 764 SYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEET 823
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRA 364
R+ GL +K ++L K + L +A
Sbjct: 824 RRRGLPIHNKTCVVLLDTLHKNDCLEQA 851
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 89/200 (44%), Gaps = 8/200 (4%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+ R Y +I G+ K ++ A L MK +GF VT ++ +K L A F
Sbjct: 586 DTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLF 645
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQ----EVYVGSEVYKALLRG 284
EE K L+ Y S++ + + G +D ++L E+ + +Y + + AL++
Sbjct: 646 EEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKA 705
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
+N A F++++ TP+ +LIN + KA+ +Q M+K G++PS
Sbjct: 706 EEIN----EALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPS 761
Query: 345 DKCVALILSACEKENQLNRA 364
++S K + A
Sbjct: 762 TISYTTMISGLAKAGNIAEA 781
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/237 (18%), Positives = 99/237 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I + ++ A +M++ G + T+ +MV K+ L A F
Sbjct: 376 NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMF 435
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
EE+ D+ ++ S++ + G +D + +M + S VY +L++ + +
Sbjct: 436 EEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNH 495
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G E ++++ + +PD ++ ++ AG+ +K F+ ++ P +
Sbjct: 496 GRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSY 555
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++++ K N E ++ G ++ A + F + G V + +L E
Sbjct: 556 SILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEE 612
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 89/210 (42%), Gaps = 4/210 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+R ++ K ++ A M + D++T ++ K G + A + +
Sbjct: 411 NVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVY 470
Query: 229 EEIKLLGEPLDKRS--YGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
E K+L S Y S++ + G + G + ++M Q ++ +
Sbjct: 471 E--KMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMF 528
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G E + +FE I+ PDAR ++LI+ AG + + Y F +M++ G +
Sbjct: 529 KAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTR 588
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGF 376
+++ K ++N+A + L +++ GF
Sbjct: 589 AYNIVIDGFCKCGKVNKAYQLLEEMKTKGF 618
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 86/217 (39%), Gaps = 2/217 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICD-QVTLTVMVVMYSKAG 219
+L+ N YT +I + + ++ M + D Q+ T M M+ KAG
Sbjct: 473 MLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMF-KAG 531
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ FEEIK D RSY ++ ++AG + L M Q + + Y
Sbjct: 532 EPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYN 591
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
++ G+ G A ++ E ++ G P +I+ + +AY F+ +
Sbjct: 592 IVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK 651
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+E + + ++ K +++ A L +L + G
Sbjct: 652 RIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 688
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 57/286 (19%), Positives = 114/286 (39%), Gaps = 23/286 (8%)
Query: 111 ICVSPETG----NLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPL-----YLQVAELAL 161
IC ETG + + L+A KP+ + VL++LK + + Y + EL
Sbjct: 39 ICNVLETGPWGPSAENTLSALS--FKPQPEFVIGVLRRLKDVNRAIEYFRWYERRTELPH 96
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL 221
ES Y ++ + + L M GF T MV+ KA L
Sbjct: 97 CPES-------YNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKL 149
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
+ + + ++ +Y +++ A+ D L ++M ++ L
Sbjct: 150 REGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTL 209
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+RG++ G + A + + ++ + + D + + I+++ G+ A+ F + GL
Sbjct: 210 IRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGL 269
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLA 387
+P + ++ K N+L+ A+E LE++ + CT A
Sbjct: 270 KPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKN-----RRVPCTYA 310
>gi|414887035|tpg|DAA63049.1| TPA: crs2 associated factor1 [Zea mays]
Length = 668
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 1/196 (0%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQV-TLTVMVVMYSKAGNLKMAEETFEEIK 232
T +I G ++ AE L G I + ++ Y + +LK AE+ +E+
Sbjct: 267 TALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMS 326
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D+ +Y +V AY RAG + +LL+EM+A V S V+ +L G+ G+ +
Sbjct: 327 QCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQ 386
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A V +Q +G+ PD ++I+ + A AF MR+ G+EP ++
Sbjct: 387 KAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLI 446
Query: 353 SACEKENQLNRALEFL 368
A K + +RA E
Sbjct: 447 DAHCKGGRHDRAAELF 462
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 99/233 (42%), Gaps = 10/233 (4%)
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
R Y ++ GY + ++NAE L M + G D+ T +++V Y++AG + A +E
Sbjct: 300 RAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKE 359
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGE-----VLLREMDAQEVYVGSEVYKALLRGY 285
++ D S V + + AG DRG+ +LREM A V Y ++ +
Sbjct: 360 MEA-----DGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTF 414
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
A F ++ GI PD LI+A+ G+ +A F+ MR++ P
Sbjct: 415 GKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGT 474
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
++++ ++ L +++ G + TL + R G +E
Sbjct: 475 TTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKE 527
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 109/249 (43%), Gaps = 6/249 (2%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+++I+ G+ + Q A L M+ G D+ VM+ + K L A + F +++
Sbjct: 372 FSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMR 431
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D ++ +++ A+ + G DR L EM G+ Y ++ + E
Sbjct: 432 EEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWE 491
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
G + + ++ G+ P+ L++ Y +G+ ++A + M+ GL+PS ++
Sbjct: 492 GVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALV 551
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWF---KRLGVVEEVEHVLREYGLR 409
+A + + AL + ++ DG V +L F +R+ V +RE GLR
Sbjct: 552 NAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLR 611
Query: 410 E---TYSKI 415
TY+ +
Sbjct: 612 PDVITYTTL 620
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 89/227 (39%), Gaps = 37/227 (16%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE-- 230
Y +I +GK + +A + M+ G D VT ++ + K G A E FEE
Sbjct: 407 YNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMR 466
Query: 231 --------------IKLLGE--------------------PLDKRSYGSMVMAYVRAGML 256
I LLGE P + +Y ++V Y R+G
Sbjct: 467 ESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVP-NIITYTTLVDVYGRSGRY 525
Query: 257 DRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALL 316
+ M A + +Y AL+ Y+ G ++ A V +A++ G+ + L
Sbjct: 526 KEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSL 585
Query: 317 INAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNR 363
INA+ + +A++ Q MR+ GL P ++ A + Q ++
Sbjct: 586 INAFGEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKALIRVEQFDK 632
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 66/171 (38%), Gaps = 2/171 (1%)
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
EP D + ++ A+ RA + D LL A + S AL+ G A+
Sbjct: 225 EP-DAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAE 283
Query: 296 RVFEAIQFAG-ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSA 354
+F AG I P R L+ Y + A M + G+ P + +L++ A
Sbjct: 284 ALFLEFFLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDA 343
Query: 355 CEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ + A L ++E DG + A F+ G ++ VLRE
Sbjct: 344 YTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLRE 394
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 94/201 (46%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
A+ + E +I Y + G + ++ A+ L M G + + VT T ++ ++ K G
Sbjct: 377 AMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDG 436
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A F E+ G +Y M+ Y + G + E +EM+ + Y
Sbjct: 437 DMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYA 496
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
+L+ G+ +NG + A ++FE ++ G P+ LI+ G+S+ A+ + +M KA
Sbjct: 497 SLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKA 556
Query: 340 GLEPSDKCVALILSACEKENQ 360
GL P D + ++ + +N+
Sbjct: 557 GLIPDDSLYSALVGSLHTDNR 577
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 99/246 (40%), Gaps = 35/246 (14%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E N R Y +I+G+ K Q++ AE L M+ +G +Q+ M+ Y + G + A +
Sbjct: 314 EPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALK 373
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL----------------------- 263
++ +G LD +Y ++ R LD + LL
Sbjct: 374 IKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHC 433
Query: 264 ------------REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDAR 311
REM + Y ++ GY+ G+ A+R + ++ G PD
Sbjct: 434 KDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVY 493
Query: 312 MCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDL 371
A L++ + + G+ A F+ M++ G EP+ ++S KE + A + D+
Sbjct: 494 TYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDM 553
Query: 372 ERDGFM 377
+ G +
Sbjct: 554 LKAGLI 559
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 100/250 (40%), Gaps = 35/250 (14%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E EA + YT ++ I E MK + D T ++ Y +AGN++
Sbjct: 240 NEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMR 299
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A + +E G ++R+YG ++ + + G ++ E+LL +M Q V + ++ ++
Sbjct: 300 RAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMI 359
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGI-----TPDARMCAL---------------------- 315
GY G + A ++ A++ G+ T + C L
Sbjct: 360 DGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVV 419
Query: 316 --------LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
LI+ + G +A F+ M + G PS +++ K+ + A F
Sbjct: 420 PNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERF 479
Query: 368 LIDLERDGFM 377
++E+ GF+
Sbjct: 480 RKEMEKKGFV 489
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 101/240 (42%), Gaps = 3/240 (1%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
++ G K ++ +A L M R G + + ++ Y + + +E E ++ G
Sbjct: 183 VVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEG 242
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
+Y +V + A + + E L EM A V +Y A++ Y GN A
Sbjct: 243 IEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAA 302
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
+V + G+ P+ R +LIN + GQ + A +M+ G+ + ++
Sbjct: 303 KVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGY 362
Query: 356 EKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE---HVLREYGLRETY 412
++ ++ AL+ +E+ G + TLA R+ ++E + H++ E G+ Y
Sbjct: 363 CRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNY 422
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 84/190 (44%)
Query: 209 TVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
+V+V K+G + A +++ G L+ Y S++ YVR R + +L M+
Sbjct: 181 SVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMEN 240
Query: 269 QEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
+ + Y L+ S + + +F ++ + D + +INAY AG ++
Sbjct: 241 EGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRR 300
Query: 329 AYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAA 388
A G+EP+++ ++++ K Q+ A L D++ G + + T+
Sbjct: 301 AAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMID 360
Query: 389 WFKRLGVVEE 398
+ R G+V++
Sbjct: 361 GYCRKGMVDD 370
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 89/233 (38%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ Y ++ + L M+ G T T++V S A ++ E F E+K
Sbjct: 215 YNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMK 274
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
D Y +++ AY RAG + R +L E V Y L+ G+ G E
Sbjct: 275 ANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQME 334
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ + +Q G+ + + +I+ Y G A M K G+E +
Sbjct: 335 AAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLA 394
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ N+L+ A L + G + TL + + G + E + RE
Sbjct: 395 CGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFRE 447
>gi|255661180|gb|ACU25759.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 426
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 105/218 (48%), Gaps = 4/218 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 213 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDR 272
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ Y +M++AY RAG++ + LL E+ + + ++ +L
Sbjct: 273 AAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDIAIHILA 331
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I + + F MR G P
Sbjct: 332 G---AGRIEEATWVFRQAIDAGEVKDITVFERMIYLFSKYKKYGNVVEVFDKMRGLGYFP 388
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKE 381
+AL+L+A K ++ ++A + ++++ G + E
Sbjct: 389 DSNVIALVLNAYGKLHEFDKANDVYMEMQEVGCVFSDE 426
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 104/248 (41%), Gaps = 6/248 (2%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L + F ++ Y +I+ +GK + A + + M+ G + + + + ++ MY +
Sbjct: 70 LKKSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENKK 129
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A F E++ + LD + M+ Y + GM + L M + Y
Sbjct: 130 FLEALSVFAEMREIKCFLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNT 189
Query: 281 LLRGYSMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
LLR Y G++E A +F +Q I + ++ Y + +KA Q M+
Sbjct: 190 LLRVY---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQ 246
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
G+EP+ + I+S K +L+RA L G + + T+ ++R G+V
Sbjct: 247 NRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVA 306
Query: 398 EVEHVLRE 405
+ +L E
Sbjct: 307 HAKRLLHE 314
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 100/237 (42%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ D T +M+ +Y + G K A++ F
Sbjct: 113 NTASYSTLLTMYVENKKFLEALSVFAEMREIKCFLDLTTCNIMIDVYGQLGMAKEADKLF 172
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 173 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 232
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G+E
Sbjct: 233 LEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLY 292
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE V R+
Sbjct: 293 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAG----AGRIEEATWVFRQ 345
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ A + L M++ D V + ++ + K + A F +K
Sbjct: 12 YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 71
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +M+ + +A + L+ EM V + Y LL Y N
Sbjct: 72 KSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENKKFL 131
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF ++ D C ++I+ Y G +++A F MRK G+EP+
Sbjct: 132 EALSVFAEMREIKCFLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
>gi|255661166|gb|ACU25752.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 426
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 105/218 (48%), Gaps = 4/218 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 213 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDR 272
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ Y +M++AY R G++ + LL E+ + + ++ +L
Sbjct: 273 AAMLFQKLRSSGVDIDQVLYQTMIVAYERVGLVAHAKRLLHELKRPD-NIPRDIAIHILA 331
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + + F MR G P
Sbjct: 332 G---AGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFP 388
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKE 381
+AL+L+A K ++ ++A + ++++ G + E
Sbjct: 389 DSXVIALVLNAYGKLHEFDKANDVYMEMQEVGCVFSDE 426
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + M+ G + + + ++ MY + A
Sbjct: 75 FTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEAL 134
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 135 SVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 194
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + ++ Y + +KA Q M+ G+E
Sbjct: 195 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIE 251
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R+G+V + +
Sbjct: 252 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERVGLVAHAKRL 311
Query: 403 LRE 405
L E
Sbjct: 312 LHE 314
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 101/237 (42%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 113 NTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 172
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 173 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 232
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G++
Sbjct: 233 LEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLY 292
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE V R+
Sbjct: 293 QTMIVAYERVGLVAHAKRLLHELKRPDNIPRDIAIHILAG----AGRIEEATWVFRQ 345
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ A + L M++ D V + ++ + K + A F +K
Sbjct: 12 YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 71
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +M+ + +A + L+ EM V + Y LL Y N
Sbjct: 72 RSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFL 131
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF ++ D C ++I+ Y G +++A F MRK G+EP+
Sbjct: 132 EALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 32/172 (18%), Positives = 76/172 (44%), Gaps = 2/172 (1%)
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
D+ +Y +++ + + G+ D L++M+ V +Y L+ + A +F
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
++ +G TPD +IN + A ++A + MR AG+ P+ + +L+ +
Sbjct: 68 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVEN 127
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRE 410
+ AL ++ ++ + + +LG+ +E + + +G+R+
Sbjct: 128 KKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF--WGMRK 177
>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
Length = 795
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 88/181 (48%), Gaps = 1/181 (0%)
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA 224
FE N Y ++ GY I+ A+ L M +G + ++VTLT+++ Y K ++ A
Sbjct: 96 GFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEA 155
Query: 225 EETFEEI-KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
E+ E+ K G +D+ +YG+++ Y + G + + EM + + V +L+
Sbjct: 156 EKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLIN 215
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
GY NG +R+ ++ + PD+ L++ Y G S KA+ M + G+EP
Sbjct: 216 GYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEP 275
Query: 344 S 344
+
Sbjct: 276 T 276
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 13/214 (6%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M+R + D T +MV Y KAG ++ A E E++ LG L+ SY S+V YV G
Sbjct: 57 MRRLDIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGD 116
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFA-GITPDARMCA 314
++ + +L+ M + V L++GY E A++V ++ G+ D
Sbjct: 117 IEGAKGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYG 176
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPS-DKCVALILSACEKENQLNRALEFL----- 368
LI+ Y G+ A M K GL+ + C +LI C K Q++ L
Sbjct: 177 ALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYC-KNGQVHEGERLLMCMRK 235
Query: 369 IDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
+DL+ D + + CTL + R G+ + +V
Sbjct: 236 LDLKPDSY-----SYCTLVDGYCRDGLSSKAFNV 264
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 1/199 (0%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAM-KRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
T +I GY K+ +++ AE L M K G + D+ ++ Y K G + A +E+
Sbjct: 140 TLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDEML 199
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+G ++ S++ Y + G + GE LL M ++ S Y L+ GY +G S
Sbjct: 200 KVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSS 259
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A V + + GI P L+ G + A + M + G+ P++ +L
Sbjct: 260 KAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLL 319
Query: 353 SACEKENQLNRALEFLIDL 371
K +RAL D+
Sbjct: 320 DGLFKMGDFSRALTLWDDI 338
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 74/165 (44%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
+ V + + K+G + A F + D +Y +++ + AG ++ L
Sbjct: 556 NNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLR 615
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
EM + + Y ALL G +G + A+R+F+ + G+ P+ +LI+ Y +
Sbjct: 616 DEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKS 675
Query: 324 GQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFL 368
G ++A M K G+ PS + +++ K++ + A++ L
Sbjct: 676 GSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLL 720
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 63/124 (50%)
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+L+ Y+ G + A VF+ + G P R C L++ G+S A + MR+
Sbjct: 2 ILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLD 61
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+ P A++++A K ++ RA+EF+ ++E+ GF + + +L + LG +E +
Sbjct: 62 IVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAK 121
Query: 401 HVLR 404
VL+
Sbjct: 122 GVLK 125
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 100/232 (43%), Gaps = 12/232 (5%)
Query: 173 YTKIIHGYGKKMQIQNA-----ENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
Y +I GY K ++ +A E + +K F+C+ ++ Y K G + E
Sbjct: 175 YGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNS-----LINGYCKNGQVHEGERL 229
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
++ L D SY ++V Y R G+ + + +M + + Y LL+G
Sbjct: 230 LMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCR 289
Query: 288 NGNSEGAQRVFEAIQFAGITPD-ARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G+ + A R++ + G+TP+ C LL ++M G +A T + ++ G+ S
Sbjct: 290 FGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKM-GDFSRALTLWDDILARGINKSIY 348
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
+++ K +++ A E +E G TL+ + ++G VEE
Sbjct: 349 AFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEE 400
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 35/191 (18%), Positives = 78/191 (40%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y + G K ++ +A L + F D T ++ +S AG + A +E+
Sbjct: 560 YNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMV 619
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +Y +++ ++G LDR L ++ + + Y L+ GY +G+
Sbjct: 620 NKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPR 679
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + GI+P + LIN + ++A M+ + ++ + + ++
Sbjct: 680 EALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLV 739
Query: 353 SACEKENQLNR 363
C + + +
Sbjct: 740 EGCIQHGDVKK 750
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 81/211 (38%), Gaps = 4/211 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I G+ + ++ A + M +GF + + + +V + G + A
Sbjct: 451 NVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLL 510
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEV--LLREMDAQEVYVGSEVYKALLRGYS 286
+++ LD R A +R LD ++ L E + + VY + G
Sbjct: 511 QKMVDFDLVLDHRCLEDFQNADIRK--LDCWKIADTLDESAIKFSLPNNVVYNIAMAGLC 568
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
+G A+R F + TPD LI+ + AG +A+ M GL P+
Sbjct: 569 KSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNIT 628
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGFM 377
+L+ K L+RA L G +
Sbjct: 629 TYNALLNGLCKSGYLDRARRLFDKLHLKGLI 659
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 62/321 (19%), Positives = 117/321 (36%), Gaps = 41/321 (12%)
Query: 118 GNLSDLLAAWV----RFMKPRRADWLAVLKQL-KLMEHPLYLQVAELALLEESFEANIRD 172
G+ D L W R + P + +L L K+ + L + + +L +I
Sbjct: 291 GDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWD-DILARGINKSIYA 349
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+ +I+G K ++ A+ T M+ G D +T + Y K GN++ A + E+++
Sbjct: 350 FNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKME 409
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
Y S+++ + + + LL EMD + + Y AL+ G+ G +
Sbjct: 410 KEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLD 469
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV---- 348
A + + G P+ +C+ ++++ G+ +A Q M L +C+
Sbjct: 470 KAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQ 529
Query: 349 -------------------------------ALILSACEKENQLNRALEFLIDLERDGFM 377
+ ++ K ++N A F + L F
Sbjct: 530 NADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFT 589
Query: 378 VGKEASCTLAAWFKRLGVVEE 398
CTL F G V E
Sbjct: 590 PDNFTYCTLIHGFSAAGYVNE 610
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 46/245 (18%), Positives = 96/245 (39%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + E + Y ++ G + ++A M +RG ++V ++ K G+
Sbjct: 268 MLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGD 327
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A +++I G ++ +M+ + G +D + + M+ Y+
Sbjct: 328 FSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRT 387
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L GY GN E A ++ E ++ I P M LI + + K M G
Sbjct: 388 LSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRG 447
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
L P+ +++ + +L++A ++ GF + + RLG ++E
Sbjct: 448 LSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEAN 507
Query: 401 HVLRE 405
+L++
Sbjct: 508 MLLQK 512
>gi|449477018|ref|XP_004154904.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 567
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 110/257 (42%), Gaps = 8/257 (3%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
+Y Q+ L +L + F YT +++ Y K+ ++ A N + M+R + VT +
Sbjct: 243 VYEQMIALGILPDIFS-----YTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSL 297
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ Y G++ A++ + G P + R+Y ++ Y + G +++ E L M + +
Sbjct: 298 IDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLFGCMMEKNL 357
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
+V VY L+ Y G + A R+ +A+ G+ + +C LIN Y G KA
Sbjct: 358 FVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAE 417
Query: 332 AFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFK 391
+M+ L+P +L K+ +A + ++ G T K
Sbjct: 418 VLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGV---NFTVVTYNTLLK 474
Query: 392 RLGVVEEVEHVLREYGL 408
L V VEH L + L
Sbjct: 475 NLFHVGHVEHALHIWNL 491
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 90/219 (41%), Gaps = 1/219 (0%)
Query: 159 LALL-EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSK 217
LAL+ E+ N R YT +I GY K+ Q++ AE M + D+ V++ Y
Sbjct: 314 LALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLFGCMMEKNLFVDEHVYGVLIHAYCT 373
Query: 218 AGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
AG + A + + +G ++ S++ Y + G +++ +L M + S
Sbjct: 374 AGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYG 433
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y LL G+ + A ++ + + G+ L+ G + A + M
Sbjct: 434 YNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMH 493
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
K G+ P++ +L A K +RA+ D GF
Sbjct: 494 KRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGF 532
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 128/349 (36%), Gaps = 68/349 (19%)
Query: 122 DLLAAWVRFMKPRRADWLA-------------VLKQLKLMEHPLYLQVAELALLEESFEA 168
DL+ R + RR D LA VL+ L+L L+ +LA + F
Sbjct: 72 DLVDRISRLLVLRRFDALANLSFSFSNELMDLVLRNLRLNPDA-SLEFFKLASKQPKFRP 130
Query: 169 NIRDYTKIIHGYGKKMQIQNAE---NTLLAMKRRGFICDQV----------------TLT 209
++ Y KI+H + + N L+ + + +I V
Sbjct: 131 DVSSYCKIVHILSRARMYKEVRVYLNELVVLCKNNYIASAVWDELVSVYREFSFSPTVFD 190
Query: 210 VMVVMYSKAGNLKMAEETF-----------------------------------EEIKLL 234
+++ +Y++ G K A F E++ L
Sbjct: 191 MILKVYAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIAL 250
Query: 235 GEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGA 294
G D SY MV AY + G +D ++EM+ Y +L+ GY G+ GA
Sbjct: 251 GILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGA 310
Query: 295 QRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSA 354
++V + GI ++R LLI Y GQ ++A F M + L + +++ A
Sbjct: 311 KKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLFGCMMEKNLFVDEHVYGVLIHA 370
Query: 355 CEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+++ AL + + G + +L + +LG V + VL
Sbjct: 371 YCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVL 419
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 36/185 (19%), Positives = 73/185 (39%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
++E++ + Y +IH Y ++ +A AM + G + V ++ Y K G
Sbjct: 351 CMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLG 410
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A E +K D Y +++ + + + L EM + V Y
Sbjct: 411 HVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYN 470
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
LL+ G+ E A ++ + G+ P+ L++A+ G +A +++
Sbjct: 471 TLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSK 530
Query: 340 GLEPS 344
G S
Sbjct: 531 GFTKS 535
>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 109/254 (42%), Gaps = 4/254 (1%)
Query: 159 LALLEE-SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSK 217
LA+LEE N+ YT +I G K + A+N M R G + + T +V++ + K
Sbjct: 181 LAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFK 240
Query: 218 AGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
G + + +E +K G + +Y ++ Y GM+D+ + EM + + G
Sbjct: 241 QGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMT 300
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y L+ G A ++ + G++P+ +LIN + G+ A F ++
Sbjct: 301 YNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLK 360
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
+GL P+ +++ K L AL+ + ++E K L F RL E
Sbjct: 361 SSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTE 420
Query: 398 ---EVEHVLREYGL 408
E+ ++ + GL
Sbjct: 421 KACEMHSLMEKSGL 434
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 97/239 (40%), Gaps = 4/239 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y I++ Y A L M G + T ++ + ++ A F E+K
Sbjct: 92 YDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNELK 151
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
LD S+G M+ AG +G LL ++ + +Y L+ G GN
Sbjct: 152 S-KVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVM 210
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ +F + G+ P+ ++L+N + G ++ + ++NM+++G+ P+ ++
Sbjct: 211 LAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLI 270
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWF---KRLGVVEEVEHVLREYGL 408
S +++A + ++ G G L K+ G ++ H + + GL
Sbjct: 271 SEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGL 329
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/234 (19%), Positives = 99/234 (42%), Gaps = 8/234 (3%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E+ + Y +I G + + A + + + G + VT +++ + G +
Sbjct: 291 EKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMD 350
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVR----AGMLDRGEVLLREMDAQEVYVGSEVY 278
A F ++K G +Y +++ Y + AG LD L++EM+ + + Y
Sbjct: 351 TAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALD----LVKEMEERCIAPSKVTY 406
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
L+ ++ +E A + ++ +G+ PD ++LI+ + G ++A F+++ +
Sbjct: 407 TILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGE 466
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKR 392
L+P+ ++ KE RAL L ++ G + + C+ R
Sbjct: 467 MHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCR 520
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 35/175 (20%), Positives = 69/175 (39%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y +I Y + A M+ +G C +T +++ + A +
Sbjct: 262 NAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLV 321
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + +Y ++ + G +D L ++ + + Y L+ GYS
Sbjct: 322 HKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKV 381
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
N GA + + ++ I P +LI+A+ ++KA M K+GL P
Sbjct: 382 ENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVP 436
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 71/172 (41%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I GY K + A + + M+ R +VT T+++ +++ + A E ++
Sbjct: 371 YNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLME 430
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y ++ G + L + + + S +Y ++ GY G+S
Sbjct: 431 KSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSY 490
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A R+ + +G+ P+ I + ++A M +GL+PS
Sbjct: 491 RALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPS 542
>gi|440793601|gb|ELR14780.1| PPR repeat/pentatricopeptide repeat domain containing protein,
partial [Acanthamoeba castellanii str. Neff]
Length = 610
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 115/254 (45%), Gaps = 10/254 (3%)
Query: 117 TGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQ-----VAELALLEE-SFEANI 170
TG++ DL+A VR + + AV L+ M+ L+ Q VA AL EE S
Sbjct: 24 TGSVEDLVA-EVRALDNAQPSMPAVASILRRMQS-LHDQGKDVGVALDALKEELSRAGQC 81
Query: 171 RDY--TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+ + +I GK + A + + M ++G++ D LT +V +AG + A+ F
Sbjct: 82 HPFICSALIALLGKLQRTDAALDLVTRMTQQGYVPDVFVLTALVSALGRAGEVGKAQYFF 141
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
EI+ LG SY SM+MA+ RAG +D+ +L M + + Y ++
Sbjct: 142 NEIQRLGMTPTLHSYNSMIMAFARAGRIDKVRDMLEVMKHKGIEPDVRTYTEIINNSCKA 201
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G A + F +Q G+ PD ++ + LI + G KA + M GLE S
Sbjct: 202 GRVAEAYQTFIEMQDVGVQPDLKVYSALIAGFSHVGDHLKAQQLKEEMEALGLEASMITY 261
Query: 349 ALILSACEKENQLN 362
+ +LS + QL
Sbjct: 262 SGMLSGLARNRQLT 275
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 99/230 (43%), Gaps = 3/230 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+ Y +I + + +I + L MK +G D T T ++ KAG + A +TF
Sbjct: 152 TLHSYNSMIMAFARAGRIDKVRDMLEVMKHKGIEPDVRTYTEIINNSCKAGRVAEAYQTF 211
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++ +G D + Y +++ + G + + L EM+A + Y +L G + N
Sbjct: 212 IEMQDVGVQPDLKVYSALIAGFSHVGDHLKAQQLKEEMEALGLEASMITYSGMLSGLARN 271
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
+RV EA++ + P+AR LIN +A+ Q + + +E +
Sbjct: 272 RQLTEMERVIEAMKKRNMVPNARALGDLINRMSDTMPMDQAFNMAQALVQKKVEANADVW 331
Query: 349 ALILSACEKENQLNRALEFLIDLERDGF--MVGKEASCTLAAWFKRLGVV 396
+L C K + + + + L D+ R +V + C L F + G V
Sbjct: 332 HALLRVCAKADDVEKGIRIL-DVMRSHSPELVSASSYCVLIDTFAKAGRV 380
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 100/255 (39%), Gaps = 37/255 (14%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS------KAG 219
EA++ Y+ ++ G + Q+ E + AMK+R + + L ++ S +A
Sbjct: 254 LEASMITYSGMLSGLARNRQLTEMERVIEAMKKRNMVPNARALGDLINRMSDTMPMDQAF 313
Query: 220 NLKMA-----------------------EETFEEIKLLG-------EPLDKRSYGSMVMA 249
N+ A ++ + I++L E + SY ++
Sbjct: 314 NMAQALVQKKVEANADVWHALLRVCAKADDVEKGIRILDVMRSHSPELVSASSYCVLIDT 373
Query: 250 YVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPD 309
+ +AG + RG LL M ++ +Y + G A +VFE ++ G+ P
Sbjct: 374 FAKAGRVSRGATLLAHMRKHKIKPDVSIYNVFIEGAMRETGYSKALQVFELMKAEGVRPS 433
Query: 310 ARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLI 369
++LI+A AG+ ++A F M + ++ +LI A + QL++A L
Sbjct: 434 HTTFSILIDAAGHAGRPEEAEAHFAAMGTSPRPDTNNYNSLI-EALARNGQLDKAERVLD 492
Query: 370 DLERDGFMVGKEASC 384
L R S
Sbjct: 493 SLLRHTHTTDNRGST 507
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 54/276 (19%), Positives = 107/276 (38%), Gaps = 40/276 (14%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+ E ++R YT+II+ K ++ A T + M+ G D + ++ +S G+
Sbjct: 181 HKGIEPDVRTYTEIINNSCKAGRVAEAYQTFIEMQDVGVQPDLKVYSALIAGFSHVGDHL 240
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDR--------------------GEVL 262
A++ EE++ LG +Y M+ R L G+++
Sbjct: 241 KAQQLKEEMEALGLEASMITYSGMLSGLARNRQLTEMERVIEAMKKRNMVPNARALGDLI 300
Query: 263 LREMDA---------------QEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGIT 307
R D ++V ++V+ ALLR + + E R+ + ++ +
Sbjct: 301 NRMSDTMPMDQAFNMAQALVQKKVEANADVWHALLRVCAKADDVEKGIRILDVMR--SHS 358
Query: 308 PD---ARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
P+ A +LI+ + AG+ + T +MRK ++P + + +E ++A
Sbjct: 359 PELVSASSYCVLIDTFAKAGRVSRGATLLAHMRKHKIKPDVSIYNVFIEGAMRETGYSKA 418
Query: 365 LEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
L+ ++ +G L G EE E
Sbjct: 419 LQVFELMKAEGVRPSHTTFSILIDAAGHAGRPEEAE 454
>gi|225445222|ref|XP_002280919.1| PREDICTED: pentatricopeptide repeat-containing protein At5g21222
[Vitis vinifera]
gi|297738818|emb|CBI28063.3| unnamed protein product [Vitis vinifera]
Length = 636
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 106/252 (42%), Gaps = 11/252 (4%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ + +I G+ + L M+ G D VT + ++ +S G + +E F
Sbjct: 316 NLVIFNSLIKGFLDITDTDGVDEALTLMEEFGVKPDVVTFSTIMNAWSSVGLMDKCQEIF 375
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+++ G D ++ + YVRAG ++ E LL M V ++ ++ G+
Sbjct: 376 DDMVKAGIEPDIHAFSILAKGYVRAGEPEKAESLLTAMGKSGVQPNVVIFTTIISGWCSA 435
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G E A RV+E + GI P+ + LI Y A + QKA Q M + G+ P +
Sbjct: 436 GKMEYASRVYEKMCEMGICPNLKTFETLIWGYGEAKEPQKAEELLQIMEQKGVAPVKSTI 495
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGL 408
L+ A N A D+E EA + + + E +E + ++ L
Sbjct: 496 QLVADAWHALGLANEAKRIKNDVE--------EAPKVMISTKEDDVAAESLERIYQKQNL 547
Query: 409 RETYSKI---PG 417
+ +YS I PG
Sbjct: 548 KASYSDIVQVPG 559
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 122/289 (42%), Gaps = 5/289 (1%)
Query: 92 ISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWV----RFMKPRRADWLAVLKQLKL 147
IS+ + K F +I E+GN+ + + + R KP + + ++K
Sbjct: 129 ISKLEKNGLKPDSVFFNAMINAFSESGNVKEAMKIFRKMKDRGCKPTTSTFNTLIKGYGN 188
Query: 148 MEHPL-YLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQV 206
P L++ +L EE+ + N R + +I + K +I A N + M G D V
Sbjct: 189 AGMPEECLKLLDLMSQEENVKPNDRTFNSLIRAWCNKKRITEAWNVVYKMAASGLQPDVV 248
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
T + Y++ G AE E++ ++R+ G ++ Y + G + L M
Sbjct: 249 TYNTLARAYAQNGETSRAEGMILEMQNNRVMPNERTCGIIINGYCKEGKMKDALRFLYRM 308
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
V+ ++ +L++G+ +++G ++ G+ PD + ++NA+ G
Sbjct: 309 RNYGVHPNLVIFNSLIKGFLDITDTDGVDEALTLMEEFGVKPDVVTFSTIMNAWSSVGLM 368
Query: 327 QKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
K F +M KAG+EP +++ + + +A L + + G
Sbjct: 369 DKCQEIFDDMVKAGIEPDIHAFSILAKGYVRAGEPEKAESLLTAMGKSG 417
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 118/272 (43%), Gaps = 7/272 (2%)
Query: 151 PLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTV 210
P Q+ +L EE + YT ++ ++ + ++ + + +++ G D V
Sbjct: 87 PQEAQLIFNSLTEEGHRPTLITYTTLLAALTRQKRFKSIPSLISKLEKNGLKPDSVFFNA 146
Query: 211 MVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE 270
M+ +S++GN+K A + F ++K G ++ +++ Y AGM + LL M +E
Sbjct: 147 MINAFSESGNVKEAMKIFRKMKDRGCKPTTSTFNTLIKGYGNAGMPEECLKLLDLMSQEE 206
Query: 271 -VYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
V + +L+R + A V + +G+ PD L AY G++ +A
Sbjct: 207 NVKPNDRTFNSLIRAWCNKKRITEAWNVVYKMAASGLQPDVVTYNTLARAYAQNGETSRA 266
Query: 330 YTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAW 389
M+ + P+++ +I++ KE ++ AL FL + G +L
Sbjct: 267 EGMILEMQNNRVMPNERTCGIIINGYCKEGKMKDALRFLYRMRNYGVHPNLVIFNSLIKG 326
Query: 390 FKRLGVVEEVEHVL---REYGLRE---TYSKI 415
F + + V+ L E+G++ T+S I
Sbjct: 327 FLDITDTDGVDEALTLMEEFGVKPDVVTFSTI 358
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 42/244 (17%), Positives = 102/244 (41%), Gaps = 4/244 (1%)
Query: 170 IRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFE 229
+R TK+++ +K + Q A+ ++ G +T T ++ ++ K
Sbjct: 71 VRSRTKLMNILIEKGKPQEAQLIFNSLTEEGHRPTLITYTTLLAALTRQKRFKSIPSLIS 130
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
+++ G D + +M+ A+ +G + + R+M + + + L++GY G
Sbjct: 131 KLEKNGLKPDSVFFNAMINAFSESGNVKEAMKIFRKMKDRGCKPTTSTFNTLIKGYGNAG 190
Query: 290 NSEGAQRVFEAI-QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E ++ + + Q + P+ R LI A+ + +A+ M +GL+P
Sbjct: 191 MPEECLKLLDLMSQEENVKPNDRTFNSLIRAWCNKKRITEAWNVVYKMAASGLQPDVVTY 250
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL---RE 405
+ A + + +RA +++++ + M + + + + G +++ L R
Sbjct: 251 NTLARAYAQNGETSRAEGMILEMQNNRVMPNERTCGIIINGYCKEGKMKDALRFLYRMRN 310
Query: 406 YGLR 409
YG+
Sbjct: 311 YGVH 314
>gi|326507498|dbj|BAK03142.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1043
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 87/192 (45%)
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
T +M+ +Y G L+ A E F + LG P+D++ Y +M+ Y +AG +L M
Sbjct: 788 TFNIMISVYGLGGKLEKATEMFTAAQELGLPIDEKLYTNMLNFYGKAGRHQDASLLFNRM 847
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
Q + G + +++ Y+ +G + A+ VF+ + G PD+ LI AY +
Sbjct: 848 KEQGIMPGKISFNSMINAYATSGLHDDAEIVFQEMHSHGQVPDSMTYLALIRAYSESRCY 907
Query: 327 QKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
KA QNM +G+ PS + ++ A E Q++ A ++ G V +
Sbjct: 908 SKAEETIQNMLGSGITPSCPHFSHLIFAFLTEGQIDEAQRICSQMQEIGVAVDLACCRAM 967
Query: 387 AAWFKRLGVVEE 398
+ G VEE
Sbjct: 968 MRAYLEHGRVEE 979
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 1/213 (0%)
Query: 180 YGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLD 239
Y K A + M+R + D+V +++ +Y K G A+ TFEEI G D
Sbjct: 362 YDKSEDYSKALSLFSEMERSRVVIDEVIYGILIRIYGKIGLYDDAQRTFEEIDNAGLLSD 421
Query: 240 KRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFE 299
+++Y +M ++ AG DR +++ M ++ V Y +LLR + + + A+ F
Sbjct: 422 EQTYVAMAQVHMNAGNYDRALLVMGSMRSRNVTPSLFSYSSLLRCHVVMEDIAAAEEAFR 481
Query: 300 AIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKEN 359
A+ G+ PD C L+ Y GQ +KA NMRK ++ + ++ C K
Sbjct: 482 ALCKYGL-PDVFCCNDLLRLYFKLGQLEKASAFILNMRKEDIQLDEALCMTVMEVCCKSG 540
Query: 360 QLNRALEFLIDLERDGFMVGKEASCTLAAWFKR 392
+ A + L ++ G + ++ + R
Sbjct: 541 MIADADKILKEMNNGGVTMKSSTMVSMIEMYAR 573
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 85/186 (45%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+++ + +I YG +++ A A + G D+ T M+ Y KAG + A F
Sbjct: 785 SLQTFNIMISVYGLGGKLEKATEMFTAAQELGLPIDEKLYTNMLNFYGKAGRHQDASLLF 844
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+K G K S+ SM+ AY +G+ D E++ +EM + S Y AL+R YS +
Sbjct: 845 NRMKEQGIMPGKISFNSMINAYATSGLHDDAEIVFQEMHSHGQVPDSMTYLALIRAYSES 904
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
A+ + + +GITP + LI A+ GQ +A M++ G+ C
Sbjct: 905 RCYSKAEETIQNMLGSGITPSCPHFSHLIFAFLTEGQIDEAQRICSQMQEIGVAVDLACC 964
Query: 349 ALILSA 354
++ A
Sbjct: 965 RAMMRA 970
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 85/182 (46%), Gaps = 5/182 (2%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +++ YGK + Q+A MK +G + +++ M+ Y+ +G AE F+E+
Sbjct: 824 YTNMLNFYGKAGRHQDASLLFNRMKEQGIMPGKISFNSMINAYATSGLHDDAEIVFQEMH 883
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G+ D +Y +++ AY + + E ++ M + + L+ + G +
Sbjct: 884 SHGQVPDSMTYLALIRAYSESRCYSKAEETIQNMLGSGITPSCPHFSHLIFAFLTEGQID 943
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
AQR+ +Q G+ D C ++ AY G+ ++ + F+ R L+P + IL
Sbjct: 944 EAQRICSQMQEIGVAVDLACCRAMMRAYLEHGRVEEGISLFETTR-GSLKPD----SFIL 998
Query: 353 SA 354
SA
Sbjct: 999 SA 1000
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 78/176 (44%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N YT +I + K+ ++ + L M+ + ++ T + ++ + ++ G + A +
Sbjct: 281 NHFTYTVVIGSFVKEGLLEESMQVLGKMRMSRLVPEEATYSSLISLSARHGRGEHAVMLY 340
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
EE++ G + S++ Y ++ + L EM+ V + +Y L+R Y
Sbjct: 341 EEMRAHGIVPSNYTCASLLALYDKSEDYSKALSLFSEMERSRVVIDEVIYGILIRIYGKI 400
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
G + AQR FE I AG+ D + + + AG +A +MR + PS
Sbjct: 401 GLYDDAQRTFEEIDNAGLLSDEQTYVAMAQVHMNAGNYDRALLVMGSMRSRNVTPS 456
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 94/210 (44%), Gaps = 1/210 (0%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M+ G + T ++ +Y K+ + A F E++ +D+ YG ++ Y + G+
Sbjct: 343 MRAHGIVPSNYTCASLLALYDKSEDYSKALSLFSEMERSRVVIDEVIYGILIRIYGKIGL 402
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
D + E+D + + Y A+ + + GN + A V +++ +TP +
Sbjct: 403 YDDAQRTFEEIDNAGLLSDEQTYVAMAQVHMNAGNYDRALLVMGSMRSRNVTPSLFSYSS 462
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
L+ + + A AF+ + K GL P C +L K QL +A F++++ ++
Sbjct: 463 LLRCHVVMEDIAAAEEAFRALCKYGL-PDVFCCNDLLRLYFKLGQLEKASAFILNMRKED 521
Query: 376 FMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ + T+ + G++ + + +L+E
Sbjct: 522 IQLDEALCMTVMEVCCKSGMIADADKILKE 551
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 99/239 (41%), Gaps = 39/239 (16%)
Query: 206 VTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG----------- 254
V T+++ Y AG +++AEE F E+ G D + G+++ AY R G
Sbjct: 174 VAYTILLRAYGNAGKIELAEEAFLEMLEAGVEPDAVACGTLLCAYARRGRHGDMMLFYKA 233
Query: 255 ---------------MLD-------RGEVL-----LREMD-AQEVYVGSEVYKALLRGYS 286
ML G+V+ + EM+ A V Y ++ +
Sbjct: 234 TCRRGVVPPMSAFNFMLSSLQKHRLHGKVIHLWKHMMEMEEANNVVPNHFTYTVVIGSFV 293
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G E + +V ++ + + P+ + LI+ G+ + A ++ MR G+ PS+
Sbjct: 294 KEGLLEESMQVLGKMRMSRLVPEEATYSSLISLSARHGRGEHAVMLYEEMRAHGIVPSNY 353
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
A +L+ +K ++AL ++ER ++ + L + ++G+ ++ + E
Sbjct: 354 TCASLLALYDKSEDYSKALSLFSEMERSRVVIDEVIYGILIRIYGKIGLYDDAQRTFEE 412
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 82/221 (37%)
Query: 182 KKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKR 241
K + Q AEN + D V + ++G L A ++ + G P +
Sbjct: 728 KHGKFQEAENIIHGCFNGEVELDTVVYNTFIKSMLESGKLYSAASIYDRMIFSGVPRSLQ 787
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI 301
++ M+ Y G L++ + + + ++Y +L Y G + A +F +
Sbjct: 788 TFNIMISVYGLGGKLEKATEMFTAAQELGLPIDEKLYTNMLNFYGKAGRHQDASLLFNRM 847
Query: 302 QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQL 361
+ GI P +INAY +G A FQ M G P ++ A +
Sbjct: 848 KEQGIMPGKISFNSMINAYATSGLHDDAEIVFQEMHSHGQVPDSMTYLALIRAYSESRCY 907
Query: 362 NRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
++A E + ++ G L F G ++E + +
Sbjct: 908 SKAEETIQNMLGSGITPSCPHFSHLIFAFLTEGQIDEAQRI 948
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/243 (19%), Positives = 100/243 (41%), Gaps = 4/243 (1%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
+I YG++ ++ AE L F MV K G ++ A F ++ G
Sbjct: 653 LIVQYGQEQKLDQAEE-LFESASTSFPKGGPVYNAMVDALCKCGKIEEAYHLFMKMADQG 711
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
D + +V + G E ++ EV + + VY ++ +G A
Sbjct: 712 HSRDVVTISILVTHLTKHGKFQEAENIIHGCFNGEVELDTVVYNTFIKSMLESGKLYSAA 771
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
+++ + F+G+ + ++I+ Y + G+ +KA F ++ GL +K +L+
Sbjct: 772 SIYDRMIFSGVPRSLQTFNIMISVYGLGGKLEKATEMFTAAQELGLPIDEKLYTNMLNFY 831
Query: 356 EKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRETYSKI 415
K + A ++ G M GK + ++ + G+ ++ E V +E ++ ++
Sbjct: 832 GKAGRHQDASLLFNRMKEQGIMPGKISFNSMINAYATSGLHDDAEIVFQEM---HSHGQV 888
Query: 416 PGS 418
P S
Sbjct: 889 PDS 891
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/217 (18%), Positives = 84/217 (38%), Gaps = 39/217 (17%)
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN- 220
L+ +E ++ YT ++ YG +I+ AE L M G D V ++ Y++ G
Sbjct: 165 LQLCYEPSVVAYTILLRAYGNAGKIELAEEAFLEMLEAGVEPDAVACGTLLCAYARRGRH 224
Query: 221 ---------------------LKMAEETFEEIKLLGEPL-----------------DKRS 242
+ ++ +L G+ + + +
Sbjct: 225 GDMMLFYKATCRRGVVPPMSAFNFMLSSLQKHRLHGKVIHLWKHMMEMEEANNVVPNHFT 284
Query: 243 YGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQ 302
Y ++ ++V+ G+L+ +L +M + Y +L+ + +G E A ++E ++
Sbjct: 285 YTVVIGSFVKEGLLEESMQVLGKMRMSRLVPEEATYSSLISLSARHGRGEHAVMLYEEMR 344
Query: 303 FAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
GI P CA L+ Y + KA + F M ++
Sbjct: 345 AHGIVPSNYTCASLLALYDKSEDYSKALSLFSEMERS 381
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 118/261 (45%), Gaps = 6/261 (2%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+LE+ ++ Y I++G K+ + +A+ M RG + D T T ++ + + GN
Sbjct: 319 MLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGN 378
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A F + D +Y +++ + + G +++ L M +++++ Y
Sbjct: 379 MTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGI 438
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ Y G+ A R+++ + GI P C +I Y +G S KA M G
Sbjct: 439 LINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKG 498
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+ P +++ +E+ +++A ++ +E++G + + F R G ++E E
Sbjct: 499 VAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAE 558
Query: 401 HVLR---EYGL---RETYSKI 415
VLR E G+ R TY+ +
Sbjct: 559 LVLRKMIEKGINPDRSTYTAL 579
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 99/250 (39%), Gaps = 11/250 (4%)
Query: 160 ALLEESFEA-----------NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTL 208
LLEE+FE ++ Y II+G KK + A+ L+ M G D T
Sbjct: 167 GLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTY 226
Query: 209 TVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
++V + N A+E F E+ G D S+ S++ + R LD+ V R+M
Sbjct: 227 NTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKK 286
Query: 269 QEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
+ + +Y L+ GY NGN A ++ + + G D ++N
Sbjct: 287 FGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTD 346
Query: 329 AYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAA 388
A F M + G P ++ ++ + +AL + + A TL
Sbjct: 347 ADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLID 406
Query: 389 WFKRLGVVEE 398
F ++G +E+
Sbjct: 407 GFCKVGEMEK 416
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 84/194 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + ++ ++ +I + + + A MK+ G + D V TV++ Y + GN
Sbjct: 249 MLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGN 308
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + +E+ G LD +Y +++ + ML + L EM + +
Sbjct: 309 MLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTT 368
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G+ +GN A +F + I PD LI+ + G+ +KA + M
Sbjct: 369 LIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRK 428
Query: 341 LEPSDKCVALILSA 354
+ P+ ++++A
Sbjct: 429 IFPNHITYGILINA 442
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 70/173 (40%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+ Y + A M +G VT ++ Y ++G+ A+E +
Sbjct: 436 YGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMI 495
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D SY +++ +VR +D+ + + +M+ + + Y ++ G+ G +
Sbjct: 496 AKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQ 555
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
A+ V + GI PD LIN + +A+ M + G P D
Sbjct: 556 EAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDD 608
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 81/202 (40%), Gaps = 1/202 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ E N+ +++ K + + ++ L M+ G D VT ++ Y + G
Sbjct: 109 VVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGL 168
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ A E + G +Y +++ + G R + +L EM + + Y
Sbjct: 169 LEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNT 228
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL N A+ +F + G+ PD + LI + +A F++M+K G
Sbjct: 229 LLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFG 288
Query: 341 LEPSDKCVALILSA-CEKENQL 361
L P + +++ C N L
Sbjct: 289 LVPDNVIYTVLMHGYCRNGNML 310
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 87/221 (39%), Gaps = 2/221 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+ +I Y + +++ ++ +G++ ++ K +++A E E+
Sbjct: 51 FDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVV 110
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G L+ + MV A + G D + L EM+ +Y Y L+ Y G E
Sbjct: 111 RSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLE 170
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV-ALI 351
A + ++ G+ P +IN G+ +A M GL P L+
Sbjct: 171 EAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLL 230
Query: 352 LSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKR 392
+ +C ++N + A E ++ R G + + +L A F R
Sbjct: 231 VESCRRDN-FSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSR 270
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 75/180 (41%)
Query: 198 RRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLD 257
R G + TL +MV K G + E++ G D +Y +++ AY R G+L+
Sbjct: 111 RSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLE 170
Query: 258 RGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
++ M + + Y A++ G G A+ + + G++PD L+
Sbjct: 171 EAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLL 230
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
+A F M + G+ P + +++ + L++AL + D+++ G +
Sbjct: 231 VESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLV 290
>gi|356508736|ref|XP_003523110.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 680
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 91/190 (47%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
II G+ K A L + G TL +++ +G AE FEEI+ G
Sbjct: 247 IIVGFSKAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENG 306
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
R+Y +++ YVR G L E ++ EM+ V + Y L+ Y+ G E A+
Sbjct: 307 LEPRTRAYNALLKGYVRTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDVYAHAGRWESAR 366
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
V + ++ + + P++ + + ++ Y+ G+ QK++ ++M+ +G++P +++
Sbjct: 367 IVLKEMEASNVQPNSYVFSRILANYRDKGEWQKSFQVLKDMKSSGVQPDRHFYNVMIDTF 426
Query: 356 EKENQLNRAL 365
K N L+ A+
Sbjct: 427 GKYNCLDHAM 436
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 75/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I +GK + +A T M G D VT ++ + K+G MAEE F E++
Sbjct: 419 YNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWNTLIDCHCKSGRHDMAEELFSEMQ 478
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G +Y M+ + ++ L +M +Q + S Y L+ Y +G
Sbjct: 479 QRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQPNSITYTTLVDVYGKSGRFS 538
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A E ++ G P + M LINAY G S+ A AF+ M GL PS
Sbjct: 539 DAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPS 590
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 129/317 (40%), Gaps = 30/317 (9%)
Query: 120 LSDLLAAWVRFMKPRRA-DWLAVLKQLKLMEHPLYLQVAELAL----------------L 162
++D++ + + P RA +LA+ + L P L LAL
Sbjct: 244 MNDIIVGFSKAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIR 303
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E E R Y ++ GY + +++AE + M++ G D+ T ++++ +Y+ AG +
Sbjct: 304 ENGLEPRTRAYNALLKGYVRTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDVYAHAGRWE 363
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGE-----VLLREMDAQEVYVGSEV 277
A +E++ + SY V + + A D+GE +L++M + V
Sbjct: 364 SARIVLKEME--ASNVQPNSY---VFSRILANYRDKGEWQKSFQVLKDMKSSGVQPDRHF 418
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y ++ + + A FE + GI PD LI+ + +G+ A F M+
Sbjct: 419 YNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWNTLIDCHCKSGRHDMAEELFSEMQ 478
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
+ G P +++++ ++ + + FL ++ G TL + + G
Sbjct: 479 QRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQPNSITYTTLVDVYGKSGRFS 538
Query: 398 ---EVEHVLREYGLRET 411
E VL+ G + T
Sbjct: 539 DAIECLEVLKSTGFKPT 555
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 77/185 (41%)
Query: 170 IRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFE 229
I Y +I+ G++ + + L M+ +G + +T T +V +Y K+G A E E
Sbjct: 486 ITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQPNSITYTTLVDVYGKSGRFSDAIECLE 545
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
+K G Y +++ AY + G+ + R M + + +L+ + +
Sbjct: 546 VLKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDR 605
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
A V + ++ I PD L+ A + QK ++ M +G P K A
Sbjct: 606 RDAEAFAVLQYMKENNIEPDVVTYTTLMKALIRVEKFQKVPAVYEEMVASGCTPDRKARA 665
Query: 350 LILSA 354
++ SA
Sbjct: 666 MLRSA 670
>gi|115477124|ref|NP_001062158.1| Os08g0500600 [Oryza sativa Japonica Group]
gi|42407356|dbj|BAD08817.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|42407750|dbj|BAD08896.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113624127|dbj|BAF24072.1| Os08g0500600 [Oryza sativa Japonica Group]
Length = 429
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 111/227 (48%), Gaps = 22/227 (9%)
Query: 152 LYLQVAELALLEESFE-----ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQV 206
+Y + + A + E F A++ + +I GY K ++++A+ M RR + V
Sbjct: 1 MYGALRDAASMREVFGSCAGVADVVSWNTVIGGYVKCGEMESAKRVFDEMPRR----NGV 56
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
+ + MV Y+ AG L +A E F+ + +G + ++ SMV + R G+L + EM
Sbjct: 57 SWSTMVGGYAAAGELDVAREMFDRMPAIGRNV--VTWNSMVTGFARHGLLPLARKMFDEM 114
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
+ + + A+LRGYS+N + +GA+ +F+ + D +I+ Y AG+
Sbjct: 115 PVRNLV----SWNAMLRGYSVNSDMDGARELFDVMP----EKDVVSWTCMISGYAQAGRY 166
Query: 327 QKAYTAFQNMR-KAGLEPSDKCVALILSACEKENQL--NRALEFLID 370
Q F+ M+ ++ ++P++ + +LSAC L R + ID
Sbjct: 167 QDTLELFRAMQTESNVQPNEVTMVSVLSACANLTALEEGRWVHAFID 213
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 107/250 (42%), Gaps = 32/250 (12%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ + ++ GY + A M + D V+ T M+ Y++AG + E F
Sbjct: 118 NLVSWNAMLRGYSVNSDMDGARELFDVMPEK----DVVSWTCMISGYAQAGRYQDTLELF 173
Query: 229 EEIKLLG--EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE--VYKALLRG 284
++ +P ++ + S++ A L+ G + +D ++ + +E + AL+
Sbjct: 174 RAMQTESNVQP-NEVTMVSVLSACANLTALEEGRWVHAFIDKHKMVLNNEYNLGAALIDM 232
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
Y+ G ++ A ++F ++ ++ LI M G ++ + AF+ M++ G +P+
Sbjct: 233 YAKCGRTDIAVKIFNSLDRKNVSA----WNALITRLAMNGNARDSVDAFEQMKRTGEKPN 288
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFK----------RLG 394
D +L+AC L+D R F ++C + K R G
Sbjct: 289 DITFVGVLTACSHGG--------LVDEGRRCFQ-SMASTCGVQPEVKHYGCMVDMLGRAG 339
Query: 395 VVEEVEHVLR 404
++EE E ++R
Sbjct: 340 LLEEAEELIR 349
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 76/176 (43%), Gaps = 7/176 (3%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ + +I +++ + MKR G + +T ++ S G + F
Sbjct: 253 NVSAWNALITRLAMNGNARDSVDAFEQMKRTGEKPNDITFVGVLTACSHGGLVDEGRRCF 312
Query: 229 EEI-KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMD-AQEVYVGSEVYKALLRGYS 286
+ + G + + YG MV RAG+L+ E L+R M A +V V+ ALL
Sbjct: 313 QSMASTCGVQPEVKHYGCMVDMLGRAGLLEEAEELIRSMPMAPDVM----VFGALLGACR 368
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLI-NAYQMAGQSQKAYTAFQNMRKAGL 341
M+ + A+RV I + C +LI + Y AG+ A Q ++++G+
Sbjct: 369 MHKRFDVAERVQSEIHSLNLNAQQSGCHVLISDIYAAAGKWFDVLEARQVVQRSGI 424
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 114/257 (44%), Gaps = 13/257 (5%)
Query: 153 YLQVAELALLEESFEA----NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTL 208
Y+Q + E FEA N+ + +I GY + I A N M +R D ++
Sbjct: 226 YVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQR----DSISW 281
Query: 209 TVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
++ Y+++G + A F E+K GE L++ ++ S + L+ G+ + +
Sbjct: 282 AAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVK 341
Query: 269 QEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
+ G V ALL Y GN + A VFE I+ + M A Y G ++
Sbjct: 342 AGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIA----GYARHGFGKE 397
Query: 329 AYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD-GFMVGKEASCTLA 387
A F++M+K G+ P D + +LSAC +++ E+ + +D G + +
Sbjct: 398 ALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMI 457
Query: 388 AWFKRLGVVEEVEHVLR 404
R G +++ +++++
Sbjct: 458 DLLGRAGRLDDAQNLMK 474
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 92/218 (42%), Gaps = 26/218 (11%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E + + + ++ GY K+ ++ +A M R D+V+ M+ Y++ G
Sbjct: 114 LFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPER----DEVSWNTMISGYAQNGE 169
Query: 221 LKMAEETFEEIKLLGEPL-DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
L A+ FEE P+ D ++ +MV YV+ GMLD + M + S +
Sbjct: 170 LLEAQRLFEE-----SPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKN----SVSWN 220
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
A++ GY + A+ +FEA+ ++ M I Y G +A F M
Sbjct: 221 AIIAGYVQCKRMDQARELFEAMPCQNVSSWNTM----ITGYAQNGDIAQARNFFDRM--- 273
Query: 340 GLEPSDKCV--ALILSACEKENQLNRALEFLIDLERDG 375
P + A I++ + AL ++++RDG
Sbjct: 274 ---PQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDG 308
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 83/213 (38%), Gaps = 16/213 (7%)
Query: 209 TVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
++VMY K GN+ A FE I E + S+ +M+ Y R G +L M
Sbjct: 352 NALLVMYCKCGNIDDAYIVFEGI----EEKEVVSWNTMIAGYARHGFGKEALMLFESMKK 407
Query: 269 QEVYVGSEVYKALLRGYSMNG-NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQ 327
+ +L S G +G + + Q GIT +++ +I+ AG+
Sbjct: 408 TGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLD 467
Query: 328 KAYTAFQNMRKAGLEPSDKCVALILSACEKENQL---NRALEFLIDLERDGFMVGKEASC 384
A +NM EP +L A +A + + ++E D + S
Sbjct: 468 DAQNLMKNMP---FEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSN 524
Query: 385 TLAAWFKRLGVVEEVEHVLREYGLRETYSKIPG 417
AA R G V + +R+ G++ K+PG
Sbjct: 525 LYAA-SGRWGDVGRMRLRMRDRGVK----KVPG 552
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 95/217 (43%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+L + + N+ Y +I+GY K +I A M+ +G VT ++ ++G
Sbjct: 1250 SLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSG 1309
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A++ F E++ G+ L +Y ++ + G L+ L + + E EV+
Sbjct: 1310 RVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFS 1369
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
LL G G E A + F+ I G+ PD +LIN G +A M +
Sbjct: 1370 ILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEK 1429
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
G P +I+ KEN+++ A++ L ++ F
Sbjct: 1430 GCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNF 1466
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 99/209 (47%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E +I Y +++G Q+++A ++ RG + + +++ Y K + A
Sbjct: 1222 EPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFR 1281
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
FEE++ G +Y +++ A ++G + + L EM ++ Y LL G
Sbjct: 1282 FFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLC 1341
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
NG+ E A +F++I+ P+ + ++L++ AG+ ++A+ F + K GLEP
Sbjct: 1342 KNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTI 1401
Query: 347 CVALILSACEKENQLNRALEFLIDLERDG 375
++++ + L+ A++ L +E G
Sbjct: 1402 AYNILINGLCNKGMLSEAVKLLWQMEEKG 1430
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 96/233 (41%), Gaps = 4/233 (1%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
A++ Y +IHG + + L M RGF D T T+++ K G + A++
Sbjct: 1153 ADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQI 1212
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
E ++ G+ D +Y +++ G L+ L + + + + Y L+ GY
Sbjct: 1213 LELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCK 1272
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG--LEPSD 345
+ + A R FE ++ G+ P LI A +G+ + A F M+ G L+ S
Sbjct: 1273 DQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLST 1332
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
CV +L K L A++ +++ E L R G +EE
Sbjct: 1333 YCV--LLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEE 1383
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/216 (19%), Positives = 95/216 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ F + +T +I G K+ ++ A+ L M+ +G D +T ++ G
Sbjct: 1181 MVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQ 1240
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ A + FE + G L+ SY ++ Y + +D EM + + + Y
Sbjct: 1241 LEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNT 1300
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ +G AQ++F +Q G +L++ G ++A FQ+++K
Sbjct: 1301 LIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTE 1360
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+P+ + +++L + +L A + ++ ++G
Sbjct: 1361 HKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGL 1396
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 84/207 (40%), Gaps = 1/207 (0%)
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL 221
L+ FE + T ++ G + I +A M ++G + D T +++ KA
Sbjct: 1008 LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKT 1067
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
+A + E++K + D +YG ++ A + GM + EM + VY +L
Sbjct: 1068 GLAIKLHEKMKGNCKG-DVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSL 1126
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+ G G + A F+ ++ GI+ D LI+ AG ++ M G
Sbjct: 1127 MDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGF 1186
Query: 342 EPSDKCVALILSACEKENQLNRALEFL 368
P +++ KE ++ A + L
Sbjct: 1187 SPDAFTFTILIDGLCKEGKVGEAQQIL 1213
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 31/169 (18%), Positives = 70/169 (41%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ G K ++ A + ++K+ + ++++ +AG L+ A + F+EI
Sbjct: 1333 YCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEIS 1392
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y ++ GML LL +M+ + S + +++
Sbjct: 1393 KNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIH 1452
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
A ++ E ++ +PD + ++L+ Q A + N + G+
Sbjct: 1453 EAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQWHAALVSLPNALQKGV 1501
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 80/177 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+G+GK + A M R G D + T +V +AG + A FE++K
Sbjct: 933 YNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLK 992
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G LD +Y M+ R+ ++ L EM ++ + Y +L+ + G E
Sbjct: 993 QTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVE 1052
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
A +++E +QF G+ P+ LI Y M+G S AY ++ M G P+ A
Sbjct: 1053 QAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFA 1109
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 80/179 (44%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M+ G+ D +T T++V KAGN+ A + ++ G + +Y +++ +R
Sbjct: 360 MEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNR 419
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
LD L M+ V + Y + Y +G S+ A FE ++ GI P+ C
Sbjct: 420 LDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNA 479
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
+ + G+ ++A F ++ GL P +++ K Q++ A+E L D+ +
Sbjct: 480 SLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSEN 538
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ YT +I ++ +A + MK D+VT M+ +S G+L +E +
Sbjct: 298 DVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFW 357
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++ G D ++ +V A +AG +D LL M Q V Y L+ G
Sbjct: 358 SEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRV 417
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
+ A +F ++ G+ P A L I+ Y +G+S KA F+ M+ G+ P+
Sbjct: 418 NRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPN 473
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 90/207 (43%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I G + ++ +A + M+ G + T + + Y K+G A ETF
Sbjct: 403 NLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETF 462
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++K+ G + + + + + G L +V+ + + + S Y +++ YS
Sbjct: 463 EKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKA 522
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A + + PD + LIN AG+ +A+ F ++ L P+
Sbjct: 523 GQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTY 582
Query: 349 ALILSACEKENQLNRALEFLIDLERDG 375
+++ KE Q+ RA+E + +G
Sbjct: 583 NTLIAGLGKEGQVQRAMELFASMTGNG 609
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 82/162 (50%), Gaps = 8/162 (4%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ E +++ YT ++ + ++ +A + +K+ G D + +M+ ++
Sbjct: 956 MVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHR 1015
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE---- 276
++ A ++E++ G D +Y S+++ AGM+++ L E+ ++G E
Sbjct: 1016 IEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQ----FIGLEPNVF 1071
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLIN 318
Y AL+RGYSM+GNS+ A V++ + G +P+ A L N
Sbjct: 1072 TYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQLPN 1113
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 88/211 (41%), Gaps = 4/211 (1%)
Query: 160 ALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
+LLEE + NI YT I G+ +I A + M+ G D VT TV++
Sbjct: 250 SLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDAL 309
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
AG L A E F ++K D+ +Y +M+ + G L R + EM+A
Sbjct: 310 CTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDV 369
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
+ L+ GN + A + + ++ G+ P+ LI+ + A F N
Sbjct: 370 ITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNN 429
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALE 366
M G+ P+ L + K + ++ALE
Sbjct: 430 METLGVVPTAYTYILFIDFYGKSGRSDKALE 460
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 94/212 (44%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
E + +++ ++ ++ GK+ + ++ L M+ G + T T+ + + +AG +
Sbjct: 223 EGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDE 282
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A + ++ G D +Y ++ A AG LD L +M A Y +L
Sbjct: 283 ACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLD 342
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
+S G+ + + ++ G PD +L+NA AG +A+ MRK G+ P
Sbjct: 343 KFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLP 402
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDG 375
+ ++S + N+L+ AL+ ++E G
Sbjct: 403 NLHTYNTLISGLLRVNRLDDALDLFNNMETLG 434
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 80/196 (40%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y I YGK + A T MK RG + V + ++ G L+ A+ F +K
Sbjct: 442 YILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLK 501
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y M+ Y +AG +D LL +M + V +L+ G +
Sbjct: 502 SNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVD 561
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A ++F ++ + P LI GQ Q+A F +M G P+ IL
Sbjct: 562 EAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTIL 621
Query: 353 SACEKENQLNRALEFL 368
K ++++ AL+ L
Sbjct: 622 DCLCKNDEVDLALKML 637
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 80/184 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L+ F Y ++ G K +++ A+ M G + +++ + K G+
Sbjct: 886 LVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGD 945
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A E F+ + G D +SY S+V AG +D ++ +Y+ S Y
Sbjct: 946 VNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNL 1005
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G + E A +++ +Q GI PD LI +AG ++A ++ ++ G
Sbjct: 1006 MIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIG 1065
Query: 341 LEPS 344
LEP+
Sbjct: 1066 LEPN 1069
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 63/140 (45%), Gaps = 9/140 (6%)
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
E Y L+ G+ N E A +F ++ AG PD LL++A+ +G+ + + ++
Sbjct: 791 ESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQ 850
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRL-- 393
M + +P+ +I++ K N L++AL+ DL F CT L
Sbjct: 851 MICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDF---SPTPCTYGPLLDGLLK 907
Query: 394 -GVVEEVEHVLRE---YGLR 409
G +EE + + E YG R
Sbjct: 908 SGRLEEAKELFEEMVDYGCR 927
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/243 (19%), Positives = 100/243 (41%), Gaps = 13/243 (5%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFIC-----DQVTLTVMVVMYSKAGNLKM 223
++ Y ++ +GK +I N L + + IC + +T +++ K+ +L
Sbjct: 824 DVFTYNLLLDAHGKSGKI----NELFELYEQ-MICSSCKPNTITHNIIIANLVKSNSLDK 878
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A + F ++ +YG ++ +++G L+ + L EM + +Y L+
Sbjct: 879 ALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILIN 938
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G+ G+ A +F+ + GI PD + L+ AG+ A F+ +++ GL
Sbjct: 939 GFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYL 998
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
L++ + +++ AL +++ G T + LGV VE
Sbjct: 999 DSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGI---NPDLFTYNSLILNLGVAGMVEQAG 1055
Query: 404 REY 406
+ Y
Sbjct: 1056 KLY 1058
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 87/208 (41%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M+ GF + + ++ + ++G + A E + + L G +++ ++++A +
Sbjct: 185 MREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRD 244
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
+ + LL EM++ + Y +R G + A R+ + ++ G PD +
Sbjct: 245 TETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTV 304
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
LI+A AG+ A F M+ + +P +L L R EF ++E DG
Sbjct: 305 LIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADG 364
Query: 376 FMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+ L + G ++E H+L
Sbjct: 365 YAPDVITFTILVNALCKAGNIDEAFHLL 392
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 101/237 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y I H + ++ A LL M+ RG I D ++ + ++ Y + G L+ +
Sbjct: 252 NTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLI 311
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
EE+++ G + +Y +++ + G + E +LREM ++ + +Y L+ G+
Sbjct: 312 EEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKL 371
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
GN A R+F+ +Q I+PD +I G+ +A F M LEP +
Sbjct: 372 GNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTY 431
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ KE ++ A + + G LA + G V+ +L E
Sbjct: 432 TALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHE 488
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 119/265 (44%), Gaps = 18/265 (6%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L+ NI YT + G K ++ A L M R+G + T +V KAGN
Sbjct: 454 MLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGN 513
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + +++++ G D +Y +++ AY ++ + R LLR+M +E+ +
Sbjct: 514 IDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNV 573
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G+ M+G E +++ + + GI P+A LI Y + + ++ M G
Sbjct: 574 LMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKG 633
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAW-------FKRL 393
+ P +++ K + A L RD MVGK + T++++ +KR
Sbjct: 634 VVPDGNTYNILIKGHCKARNMKEAWF----LHRD--MVGKGFNLTVSSYNALIKGFYKRK 687
Query: 394 GVVE--EVEHVLREYGL---RETYS 413
+E E+ +R GL RE Y+
Sbjct: 688 KFLEARELFEQMRREGLVADREIYN 712
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 96/232 (41%), Gaps = 8/232 (3%)
Query: 153 YLQVAEL----ALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICD 204
Y QV EL L+EE + N Y +I K ++ AE L M G D
Sbjct: 298 YCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPD 357
Query: 205 QVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLR 264
V T ++ + K GN+ A F+E++ D +Y +++ + G + + L
Sbjct: 358 GVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFH 417
Query: 265 EMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAG 324
EM + + Y AL+ GY G + A + + G+TP+ L + G
Sbjct: 418 EMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCG 477
Query: 325 QSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+ A M + GLE + +++ K +++A++ + D+E GF
Sbjct: 478 EVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGF 529
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 80/172 (46%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I G + ++ A+ M + D+VT T ++ Y K G +K A ++
Sbjct: 396 YTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQML 455
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+G + +Y ++ + G +D LL EM + + + Y +L+ G GN +
Sbjct: 456 QMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNID 515
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A ++ + ++ AG PDA L++AY + + +A+ + M L+P+
Sbjct: 516 QAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPT 567
>gi|255660904|gb|ACU25621.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 484
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 120/266 (45%), Gaps = 4/266 (1%)
Query: 141 VLKQLKLMEHPL-YLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR 199
VL K EH L + + E + L FE N + KII G+ ++ +A LL M ++
Sbjct: 18 VLHSAKTSEHALQFFRWVERSNL---FEHNRETHLKIIEILGRASKLNHARCILLDMPKK 74
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G D+ +M+ Y K G ++ + + F++++ LG +SY ++ A +R G
Sbjct: 75 GLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKAILRRGRYMMA 134
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+ +M ++ + + ++ G+ ++G E A R FE ++ I+PD +IN
Sbjct: 135 KRYFNKMLSEGIEPARHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMING 194
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
Y + ++A F M+ +EP+ ++ +Q++ AL + +++ G
Sbjct: 195 YYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPN 254
Query: 380 KEASCTLAAWFKRLGVVEEVEHVLRE 405
TL G + E +L+E
Sbjct: 255 AITYSTLLPGLCNAGKMIEARSILKE 280
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 83/199 (41%), Gaps = 2/199 (1%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E E I+ Y + ++ + A+ M G + T VM+ + +G ++
Sbjct: 108 ELGVERTIKSYNALFKAILRRGRYMMAKRYFNKMLSEGIEPARHTFNVMIWGFFLSGKVE 167
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A FE++K D +Y +M+ Y R ++ E EM + + Y L+
Sbjct: 168 TANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLI 227
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
+GY + A R+ E ++ GI P+A + L+ AG+ +A + + M L
Sbjct: 228 KGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAGKMIEARSILKEMMDKYLA 287
Query: 343 PSDKCV--ALILSACEKEN 359
P+D + LI S C N
Sbjct: 288 PTDNSIFMRLISSQCNSGN 306
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 72/162 (44%), Gaps = 1/162 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y +I+GY + +++ AE + MK R VT T ++ Y + A
Sbjct: 184 DVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLV 243
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM-DAQEVYVGSEVYKALLRGYSM 287
EE+K G + +Y +++ AG + +L+EM D + ++ L+
Sbjct: 244 EEMKGFGIKPNAITYSTLLPGLCNAGKMIEARSILKEMMDKYLAPTDNSIFMRLISSQCN 303
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
+GN + A V +A+ + +A +LI + AGQ +A
Sbjct: 304 SGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQYDQA 345
>gi|357124917|ref|XP_003564143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Brachypodium distachyon]
Length = 1285
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 95/212 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L+E+ F+ + Y +++ + K+ E + R GF D +T M+ MY K G
Sbjct: 196 LVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFKKDGITYNTMIHMYGKMGR 255
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L +A ++E++ LG D +Y ++ + + + +L EM + + A
Sbjct: 256 LDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRISDAGKVLEEMADAGLKPTLVTFSA 315
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ Y+ G E A R F + +G+ PD ++++ +G +K +Q M G
Sbjct: 316 LICAYAKGGRREEAVRTFSHMVASGVKPDRLAYLVMLDIIARSGDMRKLMALYQTMMNDG 375
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLE 372
P + ++L+A K N+ + + D+E
Sbjct: 376 YRPDNALYQVMLAALAKGNEYDEIEAVVQDME 407
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 105/251 (41%), Gaps = 4/251 (1%)
Query: 159 LALLEESFEANIR----DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
+A+ EE + R Y ++ +G+ + Q+AE + +GF D VT ++
Sbjct: 155 VAVFEEMMASECRPDLWTYNAMVSVHGRCGKAQDAERMFRELVEKGFKPDAVTYNSLLYA 214
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
++K G+ E EE+ G D +Y +M+ Y + G LD L EM A
Sbjct: 215 FAKEGDADTVERVCEELVRAGFKKDGITYNTMIHMYGKMGRLDLALGLYDEMRALGCTPD 274
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+ Y L+ A +V E + AG+ P + LI AY G+ ++A F
Sbjct: 275 AVTYTVLIDSLGKMDRISDAGKVLEEMADAGLKPTLVTFSALICAYAKGGRREEAVRTFS 334
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
+M +G++P ++L + + + + + DG+ + A +
Sbjct: 335 HMVASGVKPDRLAYLVMLDIIARSGDMRKLMALYQTMMNDGYRPDNALYQVMLAALAKGN 394
Query: 395 VVEEVEHVLRE 405
+E+E V+++
Sbjct: 395 EYDEIEAVVQD 405
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 92/192 (47%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E + N+ Y +I + + ++ E ++ M+R GF D L +++MY+ GN
Sbjct: 722 EAGYLPNMHIYRSMISLLCRNKRYRDVELMVVEMERAGFEPDLTILNTLLLMYTGNGNFD 781
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
E + I G ++ +Y ++++ Y R + G LL EM + + E YK+LL
Sbjct: 782 KTVEVYHSILEAGLEPNEDTYNTLIVMYSRNLRPEEGFTLLNEMGKKGLTPKLESYKSLL 841
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
E A+++FE I+ G + + +L+ Y+ A KA +M++ G+E
Sbjct: 842 AASGKAKLWEQAEQLFEEIRSKGYRLNRSLYHMLMKIYRDACNHSKAEQLLASMKEDGIE 901
Query: 343 PSDKCVALILSA 354
P+ + +++++
Sbjct: 902 PTIATMHILMTS 913
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 96/219 (43%), Gaps = 2/219 (0%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKK--MQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSK 217
A+ + E ++ + +I+ K + +A + LL +++ G D +T ++ S+
Sbjct: 88 AMRGQELEPDLVSFNTLINARAKSGCLAPGSAFDLLLEVRQVGLRPDVITYNTLISACSQ 147
Query: 218 AGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
NL A FEE+ D +Y +MV + R G E + RE+ + +
Sbjct: 148 GSNLDDAVAVFEEMMASECRPDLWTYNAMVSVHGRCGKAQDAERMFRELVEKGFKPDAVT 207
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y +LL ++ G+++ +RV E + AG D +I+ Y G+ A + MR
Sbjct: 208 YNSLLYAFAKEGDADTVERVCEELVRAGFKKDGITYNTMIHMYGKMGRLDLALGLYDEMR 267
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
G P +++ + K ++++ A + L ++ G
Sbjct: 268 ALGCTPDAVTYTVLIDSLGKMDRISDAGKVLEEMADAGL 306
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 87/218 (39%), Gaps = 3/218 (1%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
++LE E N Y +I Y + ++ + L M ++G + ++ KA
Sbjct: 789 SILEAGLEPNEDTYNTLIVMYSRNLRPEEGFTLLNEMGKKGLTPKLESYKSLLAASGKAK 848
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ AE+ FEEI+ G L++ Y ++ Y A + E LL M +
Sbjct: 849 LWEQAEQLFEEIRSKGYRLNRSLYHMLMKIYRDACNHSKAEQLLASMKEDGIEPTIATMH 908
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ Y G+ + A++V +++ + + + + NAY G T M+
Sbjct: 909 ILMTSYGTAGHPDEAEKVLNSLKSSSLEVSTLPYSTVFNAYLKNGDYNLGITKLLEMKAD 968
Query: 340 GLEPSDK---CVALILSACEKENQLNRALEFLIDLERD 374
G++P + C S CE+ L L D E D
Sbjct: 969 GVKPDHQVWTCFIRAASLCERTADAILLLNSLRDCEFD 1006
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 79/181 (43%)
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
GF + T+ +M+ ++KAG++ + + +K G + Y SM+ R
Sbjct: 689 GFKISKSTVILMLDAFTKAGDIFEVMKIYNGMKEAGYLPNMHIYRSMISLLCRNKRYRDV 748
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
E+++ EM+ + LL Y+ NGN + V+ +I AG+ P+ LI
Sbjct: 749 ELMVVEMERAGFEPDLTILNTLLLMYTGNGNFDKTVEVYHSILEAGLEPNEDTYNTLIVM 808
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
Y + ++ +T M K GL P + +L+A K +A + ++ G+ +
Sbjct: 809 YSRNLRPEEGFTLLNEMGKKGLTPKLESYKSLLAASGKAKLWEQAEQLFEEIRSKGYRLN 868
Query: 380 K 380
+
Sbjct: 869 R 869
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 48/246 (19%), Positives = 99/246 (40%), Gaps = 1/246 (0%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
+I YGK Q+AEN + +K+ I D+ ++ Y+++G + A F+ + G
Sbjct: 596 MIEAYGKIKLWQHAENFVKGLKQEPSI-DRRIWNALIHAYAESGLYEHARAVFDIMIEKG 654
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
S M+ A + G LD V+++E+ + +L ++ G+
Sbjct: 655 PLPTIDSVNGMMRALIIDGRLDELYVIVQELQDMGFKISKSTVILMLDAFTKAGDIFEVM 714
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
+++ ++ AG P+ + +I+ + + M +AG EP + +L
Sbjct: 715 KIYNGMKEAGYLPNMHIYRSMISLLCRNKRYRDVELMVVEMERAGFEPDLTILNTLLLMY 774
Query: 356 EKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRETYSKI 415
++ +E + G ++ TL + R EE +L E G + K+
Sbjct: 775 TGNGNFDKTVEVYHSILEAGLEPNEDTYNTLIVMYSRNLRPEEGFTLLNEMGKKGLTPKL 834
Query: 416 PGSRSI 421
+S+
Sbjct: 835 ESYKSL 840
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 82/192 (42%), Gaps = 6/192 (3%)
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPL--DKRSYGSMVMAYVRAGMLDRGEVLLR 264
M+ +Y+++G + + ++ G+ L D S+ +++ A ++G L G
Sbjct: 65 VFNAMMGVYARSGRFDDVRQLLDAMR--GQELEPDLVSFNTLINARAKSGCLAPGSAFDL 122
Query: 265 EMDAQEVYVGSEV--YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQM 322
++ ++V + +V Y L+ S N + A VFE + + PD +++ +
Sbjct: 123 LLEVRQVGLRPDVITYNTLISACSQGSNLDDAVAVFEEMMASECRPDLWTYNAMVSVHGR 182
Query: 323 AGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEA 382
G++Q A F+ + + G +P +L A KE + +L R GF
Sbjct: 183 CGKAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFKKDGIT 242
Query: 383 SCTLAAWFKRLG 394
T+ + ++G
Sbjct: 243 YNTMIHMYGKMG 254
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 95/217 (43%), Gaps = 10/217 (4%)
Query: 208 LTVMVVMYSKAGNLKMAEETFEEIK-LLGEP-LDKRSYGSMVMAYVRAGMLDRGEVLLRE 265
L+ V M G +K+ + +K L EP +D+R + +++ AY +G+ + +
Sbjct: 590 LSSRVTMIEAYGKIKLWQHAENFVKGLKQEPSIDRRIWNALIHAYAESGLYEHARAVFDI 649
Query: 266 MDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQ 325
M + + ++R ++G + + + +Q G L+++A+ AG
Sbjct: 650 MIEKGPLPTIDSVNGMMRALIIDGRLDELYVIVQELQDMGFKISKSTVILMLDAFTKAGD 709
Query: 326 SQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLI-DLERDGFMVGKEASC 384
+ + M++AG P+ ++S + N+ R +E ++ ++ER GF
Sbjct: 710 IFEVMKIYNGMKEAGYLPNMHIYRSMISLLCR-NKRYRDVELMVVEMERAGFEPDLTILN 768
Query: 385 TLAAWFKRLGVVE---EVEHVLREYGL---RETYSKI 415
TL + G + EV H + E GL +TY+ +
Sbjct: 769 TLLLMYTGNGNFDKTVEVYHSILEAGLEPNEDTYNTL 805
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 80/199 (40%), Gaps = 10/199 (5%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I GK +I +A L M G VT + ++ Y+K G + A TF +
Sbjct: 278 YTVLIDSLGKMDRISDAGKVLEEMADAGLKPTLVTFSALICAYAKGGRREEAVRTFSHMV 337
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D+ +Y M+ R+G + + L + M + +Y+ +L + +
Sbjct: 338 ASGVKPDRLAYLVMLDIIARSGDMRKLMALYQTMMNDGYRPDNALYQVMLAALAKGNEYD 397
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA---GLEPSDKCVA 349
+ V + ++ + ++LI A + Q K ++KA G EP K +
Sbjct: 398 EIEAVVQDMEVVCQMNPQLVSSILIKA-ECISQGAKL------LKKACLQGHEPDSKSLL 450
Query: 350 LILSACEKENQLNRALEFL 368
IL A E + L L
Sbjct: 451 SILDAYETTGKHEEGLSLL 469
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 41/235 (17%), Positives = 92/235 (39%)
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
R + +IH Y + ++A M +G + ++ M+ G L +E
Sbjct: 625 RIWNALIHAYAESGLYEHARAVFDIMIEKGPLPTIDSVNGMMRALIIDGRLDELYVIVQE 684
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
++ +G + K + M+ A+ +AG + + M +Y++++ N
Sbjct: 685 LQDMGFKISKSTVILMLDAFTKAGDIFEVMKIYNGMKEAGYLPNMHIYRSMISLLCRNKR 744
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
+ + ++ AG PD + L+ Y G K + ++ +AGLEP++
Sbjct: 745 YRDVELMVVEMERAGFEPDLTILNTLLLMYTGNGNFDKTVEVYHSILEAGLEPNEDTYNT 804
Query: 351 ILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ + + L ++ + G E+ +L A + + E+ E + E
Sbjct: 805 LIVMYSRNLRPEEGFTLLNEMGKKGLTPKLESYKSLLAASGKAKLWEQAEQLFEE 859
>gi|255661130|gb|ACU25734.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 426
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 105/218 (48%), Gaps = 4/218 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ + N+ Y ++ YGK ++ A N + M+ RG + +T + ++ ++ K G L
Sbjct: 213 KNIDQNVVTYNSMMMIYGKTLEHVKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDR 272
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ Y +M++AY RAG++ + LL E+ + + ++ +L
Sbjct: 273 AAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDIAIHILA 331
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + + F MR G P
Sbjct: 332 G---AGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFP 388
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKE 381
+ALIL+A K ++ ++A + ++++ G + E
Sbjct: 389 DSNVIALILNAYGKLHEFDKANDVYMEMQEVGCVFSDE 426
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 100/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + M+ G + + + ++ MY + A
Sbjct: 75 FTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEAL 134
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 135 SVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 194
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + ++ Y + KA Q M+ G+E
Sbjct: 195 ---GDAELFGEAIHLFRLMQRKNIDQNVVTYNSMMMIYGKTLEHVKANNLIQEMQNRGIE 251
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 252 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRL 311
Query: 403 LRE 405
L E
Sbjct: 312 LHE 314
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ A + L M++ D V + ++ + K + A F +K
Sbjct: 12 YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 71
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +M+ + +A + L+ EM V + Y LL Y N
Sbjct: 72 RSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFL 131
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF ++ D C ++I+ Y G +++A F MRK G+EP+
Sbjct: 132 EALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 100/237 (42%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 113 NTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 172
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 173 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIDQNVVTYNSMMMIYGKT 232
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
A + + +Q GI P++ + +I+ + G+ +A FQ +R +G++
Sbjct: 233 LEHVKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLY 292
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE V R+
Sbjct: 293 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAG----AGRIEEATWVFRQ 345
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 32/172 (18%), Positives = 76/172 (44%), Gaps = 2/172 (1%)
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
D+ +Y +++ + + G+ D L++M+ V +Y L+ + A +F
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
++ +G TPD +IN + A ++A + MR AG+ P+ + +L+ +
Sbjct: 68 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVEN 127
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRE 410
+ AL ++ ++ + + +LG+ +E + + +G+R+
Sbjct: 128 KKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF--WGMRK 177
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 90/205 (43%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+S +I Y +I+G K +++ A LL M+ G + VT T ++ K G +
Sbjct: 27 KSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDE 86
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A E E +K G D YG+++ + G LDRG+ L EM + + Y L+
Sbjct: 87 AMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVH 146
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G + A V A+ GI PD LI+ G++ A M + G EP
Sbjct: 147 GLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEP 206
Query: 344 SDKCVALILSACEKENQLNRALEFL 368
S+ ++LS KE + A + L
Sbjct: 207 SNVTYNVLLSGLCKEGLVIDAFKIL 231
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 90/214 (42%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E E N+ + +I G K+ ++ A M ++G + VT +++ KAG +K
Sbjct: 273 ENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIK 332
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A E ++++ LG + +Y ++ + + ML+ + L EM + Y L+
Sbjct: 333 EAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLM 392
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G+ E A+ +F+ + A PD +I+ AG Q M + GL
Sbjct: 393 ASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLR 452
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
P + +++ K +L+ A L + GF
Sbjct: 453 PDALTFSTLINRLSKLGELDEAKSALERMVASGF 486
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 84/209 (40%), Gaps = 2/209 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + AN+ Y+ ++HG + Q + A L AM G D VT T ++ K G
Sbjct: 129 MLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGR 188
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A + + GE +Y ++ + G++ +LR M + Y
Sbjct: 189 ATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNT 248
Query: 281 LLRGYSMNGNSEGAQRVFEAI--QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
L++G G + A ++F ++ + P+ +LI G+ KA + M K
Sbjct: 249 LMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVK 308
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEF 367
G + ++L C K ++ A+E
Sbjct: 309 KGSCGNLVTYNMLLGGCLKAGKIKEAMEL 337
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 66/167 (39%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKL 233
T ++ G K ++ A L AMK++GF D V ++ + GNL +E F+E+
Sbjct: 72 TTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLG 131
Query: 234 LGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEG 293
G + +Y +V R G +L M ++ Y L+ G +G +
Sbjct: 132 KGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATH 191
Query: 294 AQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
A + + G P +L++ G A+ + M + G
Sbjct: 192 AMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKG 238
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 84/207 (40%), Gaps = 13/207 (6%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
L+ QV +L + SF Y+ +I G+ K + A+ M+ G +
Sbjct: 337 LWKQVLDLGFVPNSFT-----YSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTL 391
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ K G+L+ A+ F+E+ D S+ +M+ ++AG ++E+ + V
Sbjct: 392 MASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQ----FVKELQMKMV 447
Query: 272 YVG----SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQ 327
+G + + L+ S G + A+ E + +G TPDA + L+ G +
Sbjct: 448 EMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTT 507
Query: 328 KAYTAFQNMRKAGLEPSDKCVALILSA 354
+ M G K V+ IL+
Sbjct: 508 EIINLLHQMAAKGTVLDRKIVSTILTC 534
>gi|30689969|ref|NP_197945.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|357528836|sp|Q8GZ63.2|PP397_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g25630
gi|332006092|gb|AED93475.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 574
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 126/289 (43%), Gaps = 9/289 (3%)
Query: 92 ISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRF----MKPRRADWLAVLKQLKL 147
+S+ + TK F +I E+GN+ D + A ++ + P + + ++K +
Sbjct: 103 VSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGI 162
Query: 148 MEHP-LYLQVAELALLEESFEA--NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICD 204
P ++ +L L E + + NIR + ++ + KK +++ A + M+ G D
Sbjct: 163 AGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPD 222
Query: 205 QVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPL--DKRSYGSMVMAYVRAGMLDRGEVL 262
VT + Y + G AE E ++ E + R+ G +V Y R G + G
Sbjct: 223 TVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRF 282
Query: 263 LREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQM 322
+R M V V+ +L+ G+ + +G V ++ + D + ++NA+
Sbjct: 283 VRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSS 342
Query: 323 AGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDL 371
AG +KA F+ M KAG++P +++ + + +A E L L
Sbjct: 343 AGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETL 391
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 1/192 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E EAN+ + +I+G+ + M + L MK D +T + ++ +S AG ++
Sbjct: 288 EMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYME 347
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A + F+E+ G D +Y + YVRA + E LL + E ++ ++
Sbjct: 348 KAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIV-ESRPNVVIFTTVI 406
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G+ NG+ + A RVF + G++P+ + L+ Y Q KA Q MR G++
Sbjct: 407 SGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVK 466
Query: 343 PSDKCVALILSA 354
P + L+ A
Sbjct: 467 PENSTFLLLAEA 478
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 130/313 (41%), Gaps = 13/313 (4%)
Query: 102 RCKAFVKQIICVSP-ETGNLSDLLAAW--VR---FMKPRRADWLAVLKQLKLMEHPLYLQ 155
RC FV + ++ ++G +SD + + VR F P + K + P+ +
Sbjct: 150 RCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMIN-SNSPVTIW 208
Query: 156 VAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
+LE F ++ Y +I+ + K+ I++A+ +++RG V+ ++
Sbjct: 209 TFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGL 268
Query: 216 SKAGNLKMA---EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY 272
K+ NL ++T EE ++ D +Y ++ + G LD E L EM + +
Sbjct: 269 CKSRNLDEGFRLKKTMEENRIYP---DVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLR 325
Query: 273 VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTA 332
+ AL+ G + + A + + G+ PD M L+N G KA
Sbjct: 326 PNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKL 385
Query: 333 FQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKR 392
MR G++P ++ KE L A+E + +G ++ A L + F R
Sbjct: 386 VDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCR 445
Query: 393 LGVVEEVEHVLRE 405
G V + E LRE
Sbjct: 446 DGRVRDAERTLRE 458
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 107/225 (47%), Gaps = 8/225 (3%)
Query: 154 LQVAELALLEESFEANIR----DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLT 209
L VAE L +E + +R +T +I G + +I +A NT M G D V
Sbjct: 309 LDVAE-QLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYN 367
Query: 210 VMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQ 269
++ K G++ A + +E++++G DK +Y +++ Y + G L+ + + M+ +
Sbjct: 368 TLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEE 427
Query: 270 EVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
V + + + AL+ G+ +G A+R + AG+ PD ++I+ Y G +
Sbjct: 428 GVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMG 487
Query: 330 YTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA---LEFLIDL 371
+ + M+ G +P ++++ K+ Q+ A LE +++L
Sbjct: 488 FKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNL 532
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 71/155 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I GY K+ +++A M G + D V T ++ + + G ++ AE T E+
Sbjct: 401 YTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMV 460
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y ++ Y + G + G LL+EM G Y L+ G G +
Sbjct: 461 EAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMK 520
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQ 327
A + EA+ G+TPD +L+ + G+++
Sbjct: 521 NANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAE 555
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 97/217 (44%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E ++ Y+ +IHG K+ ++ AE M++RG + +T T ++ ++ +
Sbjct: 286 ENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRID 345
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A T+ ++ +G D Y +++ + G +++ L+ EM + Y L+
Sbjct: 346 SAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLI 405
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
GY G+ E A + + + G+ D LI+ + G+ + A + M +AG++
Sbjct: 406 DGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMK 465
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
P D +++ K+ + + L +++ +G G
Sbjct: 466 PDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPG 502
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 79/180 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +++G K + A + M+ G D++T T ++ Y K G+L+ A E + +
Sbjct: 366 YNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMN 425
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G LD ++ +++ + R G + E LREM + Y ++ GY GN +
Sbjct: 426 EEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVK 485
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
++ + +Q G P +L+N GQ + A + M G+ P D ++L
Sbjct: 486 MGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILL 545
>gi|297839351|ref|XP_002887557.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333398|gb|EFH63816.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 845
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 86/183 (46%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ II+ GK + A M +G + VT +M+ +++KA N + A + + +++
Sbjct: 457 YSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQ 516
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G DK +Y ++ G L+ E + EM + VY L+ + GN E
Sbjct: 517 NAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVE 576
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + ++ + AG+ P+ C L++ + + +AY Q+M GL PS + L+L
Sbjct: 577 KAWQWYQEMLHAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 636
Query: 353 SAC 355
S C
Sbjct: 637 SCC 639
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 109/244 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++++ + N Y ++IH YG+ + A N M+ G D+VT ++ +++KAG
Sbjct: 375 MVKDGCKPNTVTYNRLIHSYGRANYLNEAMNVFKQMQEAGCEPDRVTYCTLIDIHAKAGF 434
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L +A + ++ ++ G D +Y ++ +AG L L EM Q +
Sbjct: 435 LDIAMDMYQRMQAAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNI 494
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ ++ N E A +++ +Q AG PD ++++ G ++A F M++
Sbjct: 495 MIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKN 554
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
P + L++ K + +A ++ ++ G +L + F R+ + E
Sbjct: 555 WVPDEPVYGLLVDLWGKAGNVEKAWQWYQEMLHAGLRPNVPTCNSLLSTFLRVHRMSEAY 614
Query: 401 HVLR 404
++L+
Sbjct: 615 NLLQ 618
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/236 (19%), Positives = 100/236 (42%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+ F+ + YT ++ G+ Q L M + G + VT ++ Y +A L
Sbjct: 342 QPGFKHDGHTYTTMVGNLGRAKQFGAINRLLDEMVKDGCKPNTVTYNRLIHSYGRANYLN 401
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A F++++ G D+ +Y +++ + +AG LD + + M A + + Y ++
Sbjct: 402 EAMNVFKQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAAGLSPDTFTYSVII 461
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G+ A R+F + G TP+ ++I + A + A +++M+ AG +
Sbjct: 462 NCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQ 521
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
P ++++ L A +++R ++ + L + + G VE+
Sbjct: 522 PDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVEK 577
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 98/243 (40%), Gaps = 14/243 (5%)
Query: 177 IHGYGKKM----------QIQNAENTL---LAMKRR-GFICDQVTLTVMVVMYSKAGNLK 222
+H +G +M Q+ N N L +KR+ GF D T T MV +A
Sbjct: 307 LHNFGFRMDAYQANQVLKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFG 366
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
+E+ G + +Y ++ +Y RA L+ + ++M Y L+
Sbjct: 367 AINRLLDEMVKDGCKPNTVTYNRLIHSYGRANYLNEAMNVFKQMQEAGCEPDRVTYCTLI 426
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
++ G + A +++ +Q AG++PD +++IN AG A+ F M G
Sbjct: 427 DIHAKAGFLDIAMDMYQRMQAAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCT 486
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ ++++ K AL+ D++ GF K + G +EE E V
Sbjct: 487 PNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGV 546
Query: 403 LRE 405
E
Sbjct: 547 FAE 549
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 58/117 (49%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F+ + Y+ ++ G ++ AE M+R+ ++ D+ ++V ++ KAGN++ A
Sbjct: 520 FQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVEKAW 579
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
+ ++E+ G + + S++ ++R + LL+ M A ++ + Y LL
Sbjct: 580 QWYQEMLHAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 636
>gi|359474892|ref|XP_002276432.2| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
chloroplastic-like [Vitis vinifera]
Length = 1115
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 94/214 (43%), Gaps = 2/214 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ E N+ Y +I G G+ Q+ A M+ + D+V ++ ++G
Sbjct: 553 MVNAEVEPNVHTYGALIDGCGRAGQVAKAFGAYGIMRSKKVEPDRVVFNALITACGQSGA 612
Query: 221 LKMAEETFEEIKLLGEPLDKR--SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
+ A + E++ +P+D + G+++ A AG +DR + + +D + EVY
Sbjct: 613 VDRAFDVLAEMRAETQPIDPDHITVGALIKACTNAGQVDRAREVYKMIDQYNIKGTPEVY 672
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
+ +S G+ E A V+ + G+ PD + LI+ AG+ A+ Q R
Sbjct: 673 TIAVSSHSQIGDWEFAYSVYTDMTRKGVVPDEMFLSALIDVAGHAGKLDAAFEVIQEARI 732
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDLE 372
G+ + ++ AC +ALE +D++
Sbjct: 733 QGIPLGIVSYSSLMGACSNAKNWQKALELYVDIK 766
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 76/166 (45%)
Query: 209 TVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
T+ V +S+ G+ + A + ++ G D+ +++ AG LD +++E
Sbjct: 673 TIAVSSHSQIGDWEFAYSVYTDMTRKGVVPDEMFLSALIDVAGHAGKLDAAFEVIQEARI 732
Query: 269 QEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
Q + +G Y +L+ S N + A ++ I+ + P LI A Q +K
Sbjct: 733 QGIPLGIVSYSSLMGACSNAKNWQKALELYVDIKSMKLNPTVSTMNALITALCEGEQLEK 792
Query: 329 AYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
A +M++AGL P+ +++L A EK++ ++ L L +D
Sbjct: 793 AMEVLSDMKRAGLCPNTITYSILLVASEKKDDIDVGLMILSQARKD 838
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 64/144 (44%), Gaps = 11/144 (7%)
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
++Y L+ + +G + VF + A + P+ LI+ AGQ KA+ A+
Sbjct: 528 KLYTTLISTCAKSGKVDAMFEVFHEMVNAEVEPNVHTYGALIDGCGRAGQVAKAFGAYGI 587
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLID-------LERDGFMVGKE-ASCTLA 387
MR +EP +++AC + ++RA + L + ++ D VG +CT A
Sbjct: 588 MRSKKVEPDRVVFNALITACGQSGAVDRAFDVLAEMRAETQPIDPDHITVGALIKACTNA 647
Query: 388 AWFKRLGVVEEVEHVLREYGLRET 411
R EV ++ +Y ++ T
Sbjct: 648 GQVDR---AREVYKMIDQYNIKGT 668
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 91/207 (43%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +IHGY + +++ A L MK RG D T ++ K G L+ A
Sbjct: 270 NVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGIL 329
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++K +G +Y +++ Y G L + EM + + Y L+ +
Sbjct: 330 EKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLE 389
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A + + + +GI PD+ +LIN Y G ++KA+ M G++P+
Sbjct: 390 GKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTY 449
Query: 349 ALILSACEKENQLNRALEFLIDLERDG 375
++ K N++ A + + R+G
Sbjct: 450 TSLIYVLSKRNRMKAADDLFEKIIREG 476
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 115/271 (42%), Gaps = 19/271 (7%)
Query: 119 NLSDLLAAW-VRFMKPRRADWLAVLKQLKLMEHPLYLQ------------VAELALLEES 165
N DL+ A+ R RRA L + L+ H L+L+ + + ++ +S
Sbjct: 353 NKGDLVKAFGYRDEMVRRA-ILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDS 411
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
NI +I+GY + + A N M +G VT T ++ + SK +K A+
Sbjct: 412 ITYNI-----LINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAAD 466
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+ FE+I G D + +++ + G LDR LL+EMD + + Y L++G
Sbjct: 467 DLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGR 526
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
G E A+ + + ++ GI PD LI+ Y G A+T M G P+
Sbjct: 527 CREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTL 586
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGF 376
++ K Q + A E L ++ G
Sbjct: 587 LTYNALIQGLCKNQQGDLAEELLKEMVSKGI 617
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 92/226 (40%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I GY K + A M RR + T +++ G + A+ +++
Sbjct: 344 YNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMG 403
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y ++ Y R G + L EM ++ + Y +L+ S +
Sbjct: 404 DSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMK 463
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +FE I G +PD M LI+ + G +A+ + M K + P + ++
Sbjct: 464 AADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLM 523
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
+E ++ A E L +++R G + TL + + + G + +
Sbjct: 524 QGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDIND 569
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 64/149 (42%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
MK +G + T M+ ++ K + + E+ L ++ M+ + G
Sbjct: 192 MKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGK 251
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
L + + + M+ V Y ++ GY G EGA+ V + ++ G+ PD+
Sbjct: 252 LKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGS 311
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
LI+ G+ ++A + M++ GL P+
Sbjct: 312 LISGMCKGGKLEEASGILEKMKEIGLLPT 340
>gi|356527777|ref|XP_003532484.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 583
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 106/245 (43%), Gaps = 1/245 (0%)
Query: 132 KPRRADWLAVLKQLKLMEHPL-YLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAE 190
KP + + ++K + P +++ E+ +E+ + N R Y +I + K +++ A
Sbjct: 124 KPTTSTYNTLIKGFGIAGRPYESMKLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAW 183
Query: 191 NTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAY 250
N L M G D VT M Y++ G + AE ++ ++R+ G ++ Y
Sbjct: 184 NVLHKMVASGIQPDVVTYNTMARAYAQNGETERAERLILKMPYNIVKPNERTCGIIISGY 243
Query: 251 VRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDA 310
+ G + L M V V+ +L++GY ++ G ++ GI PD
Sbjct: 244 CKEGNMPEALRFLYRMKELGVDPNPVVFNSLIKGYLDTTDTNGVDEALTLMEEFGIKPDV 303
Query: 311 RMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLID 370
+ ++NA+ AG + F +M KAG+EP +++ + Q +A L
Sbjct: 304 VTFSTIMNAWSSAGLMENCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAEALLTS 363
Query: 371 LERDG 375
+ + G
Sbjct: 364 MSKYG 368
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 77/182 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+ +I GY + L M+ G D VT + ++ +S AG ++ EE F ++
Sbjct: 271 FNSLIKGYLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMV 330
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y + YVRAG + E LL M V ++ ++ G+ G +
Sbjct: 331 KAGIEPDIHAYSILAKGYVRAGQPRKAEALLTSMSKYGVQPNVVIFTTIISGWCAAGKMD 390
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A R+ E + G +P+ + LI Y A Q KA M + G+ P + L+
Sbjct: 391 RAFRLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEELLTTMEERGVVPEMSTMQLVA 450
Query: 353 SA 354
A
Sbjct: 451 DA 452
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/281 (18%), Positives = 108/281 (38%), Gaps = 36/281 (12%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L EE + + YT ++ ++ + ++ L + G D + L M+ +S++G
Sbjct: 48 LTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNGMKPDSILLNAMINAFSESGK 107
Query: 221 LKMAEETFEEIK-------------------LLGEPL-----------------DKRSYG 244
+ A + F+++K + G P + R+Y
Sbjct: 108 VDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYESMKLLEMMGQDENVKPNDRTYN 167
Query: 245 SMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFA 304
++ A+ L+ +L +M A + Y + R Y+ NG +E A+R+ + +
Sbjct: 168 ILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETERAERLILKMPYN 227
Query: 305 GITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
+ P+ R C ++I+ Y G +A M++ G++P+ ++ N
Sbjct: 228 IVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVVFNSLIKGYLDTTDTNGV 287
Query: 365 LEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
E L +E G T+ + G++E E + +
Sbjct: 288 DEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFND 328
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 99/235 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N R II GY K+ + A L MK G + V ++ Y + +E
Sbjct: 232 NERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVVFNSLIKGYLDTTDTNGVDEAL 291
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ G D ++ +++ A+ AG+++ E + +M + Y L +GY
Sbjct: 292 TLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMVKAGIEPDIHAYSILAKGYVRA 351
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G A+ + ++ G+ P+ + +I+ + AG+ +A+ + M + G P+ K
Sbjct: 352 GQPRKAEALLTSMSKYGVQPNVVIFTTIISGWCAAGKMDRAFRLCEKMHEMGTSPNLKTY 411
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
++ + Q +A E L +E G + +A ++ +G+ +E +L
Sbjct: 412 ETLIWGYGEAKQPWKAEELLTTMEERGVVPEMSTMQLVADAWRAIGLFKEANRIL 466
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 34/181 (18%), Positives = 75/181 (41%), Gaps = 1/181 (0%)
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A+ F + G +Y ++V A R LL ++ + S + A++
Sbjct: 41 AQAVFNNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNGMKPDSILLNAMIN 100
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM-RKAGLE 342
+S +G + A ++F+ ++ G P LI + +AG+ ++ + M + ++
Sbjct: 101 AFSESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYESMKLLEMMGQDENVK 160
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+D+ +++ A + +L A L + G T+A + + G E E +
Sbjct: 161 PNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETERAERL 220
Query: 403 L 403
+
Sbjct: 221 I 221
>gi|168039319|ref|XP_001772145.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676476|gb|EDQ62958.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 313
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 98/218 (44%), Gaps = 3/218 (1%)
Query: 154 LQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVV 213
LQ+ E + + + Y +I Y + + + L F+ D+ T ++
Sbjct: 71 LQLFEYMKVTVDCQPTLVTYNTLISMYSRMGATEEMKKIFLDCTEAEFVPDRHTYNALIW 130
Query: 214 MYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYV 273
Y +AG L E TF E++ D +Y ++++ Y RA +D+ EV+L M A + +
Sbjct: 131 GYMRAGQLNEMEVTFNELQAKKFNADVITYNALIIGYARANAVDKMEVVLSSMQAVGIPI 190
Query: 274 GSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAF 333
+ AL+ YS G + + E ++ AG +LI+ Y G K AF
Sbjct: 191 NTMALHALIMAYSRAGTYDRLAKTMEVVKDAGWMLQPATYNILISEYGKVGYLDKMEQAF 250
Query: 334 QNMRKAGLEPSDKCVALILSACE---KENQLNRALEFL 368
+ M A ++PS + +++A E E Q++R L+ +
Sbjct: 251 REMMNASVKPSFETFQYMINAYEAADNETQVDRILDLM 288
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 81/190 (42%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
L E F + Y +I GY + Q+ E T ++ + F D +T +++ Y++A
Sbjct: 111 LDCTEAEFVPDRHTYNALIWGYMRAGQLNEMEVTFNELQAKKFNADVITYNALIIGYARA 170
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
+ E ++ +G P++ + +++MAY RAG DR + + + Y
Sbjct: 171 NAVDKMEVVLSSMQAVGIPINTMALHALIMAYSRAGTYDRLAKTMEVVKDAGWMLQPATY 230
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
L+ Y G + ++ F + A + P +INAY+ A + MRK
Sbjct: 231 NILISEYGKVGYLDKMEQAFREMMNASVKPSFETFQYMINAYEAADNETQVDRILDLMRK 290
Query: 339 AGLEPSDKCV 348
AG EP V
Sbjct: 291 AGCEPKSNAV 300
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%)
Query: 154 LQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVV 213
++V L + F A++ Y +I GY + + E L +M+ G + + L +++
Sbjct: 141 MEVTFNELQAKKFNADVITYNALIIGYARANAVDKMEVVLSSMQAVGIPINTMALHALIM 200
Query: 214 MYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYV 273
YS+AG +T E +K G L +Y ++ Y + G LD+ E REM V
Sbjct: 201 AYSRAGTYDRLAKTMEVVKDAGWMLQPATYNILISEYGKVGYLDKMEQAFREMMNASVKP 260
Query: 274 GSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITP 308
E ++ ++ Y N R+ + ++ AG P
Sbjct: 261 SFETFQYMINAYEAADNETQVDRILDLMRKAGCEP 295
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 99/241 (41%), Gaps = 1/241 (0%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
+E N ++Y K+I G+ Q Q A + M++RG V+ ++ Y + + A
Sbjct: 12 WEVNPKEYAKMISFAGRINQPQLAADLFDEMEKRGIKKTAVSYNALIHSYGRNNEPQKAL 71
Query: 226 ETFEEIKLLGEPLDKR-SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
+ FE +K+ + +Y +++ Y R G + + + + E Y AL+ G
Sbjct: 72 QLFEYMKVTVDCQPTLVTYNTLISMYSRMGATEEMKKIFLDCTEAEFVPDRHTYNALIWG 131
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
Y G + F +Q D LI Y A K +M+ G+ +
Sbjct: 132 YMRAGQLNEMEVTFNELQAKKFNADVITYNALIIGYARANAVDKMEVVLSSMQAVGIPIN 191
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
+ ++ A + +R + + ++ G+M+ L + + ++G ++++E R
Sbjct: 192 TMALHALIMAYSRAGTYDRLAKTMEVVKDAGWMLQPATYNILISEYGKVGYLDKMEQAFR 251
Query: 405 E 405
E
Sbjct: 252 E 252
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 101/238 (42%), Gaps = 3/238 (1%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ E +I YT +I G+ K + L + RRGF D VT + ++ KAG
Sbjct: 170 MVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGR 229
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ A + FEE+ + +Y S++ Y RAG +D LL +M + Y
Sbjct: 230 LRDAVDIFEEMSCAPTAI---TYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTT 286
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ + G + A +F+ + ++PD L++ G+ + A + + + G
Sbjct: 287 LMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRG 346
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
P+ ++ K NQ+ +A E + D GF+ L A R G ++
Sbjct: 347 CPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQ 404
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 72/177 (40%), Gaps = 6/177 (3%)
Query: 159 LALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
L LLEE I Y ++ GY K Q++ AE + + RGF+ + VT ++V
Sbjct: 336 LELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAG 395
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRS--YGSMVMAYVRAGMLDRGEVLLREMDAQEVY 272
+AG A + +++ G P Y ++ A R G D EM +
Sbjct: 396 CCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYV 455
Query: 273 VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
+ + ++ + A + E + G TP C +++AY AG QKA
Sbjct: 456 PAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKA 512
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 93/213 (43%), Gaps = 2/213 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ ++ +T ++ G + ++++A L + RRG T +V Y KA
Sbjct: 307 MVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQ 366
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV--Y 278
++ AEE + + G + +Y +V RAG D+ L +++++ + V Y
Sbjct: 367 VRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMY 426
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
+L +G ++ A + +E + G P A A ++ A A Q Q+A+ + M K
Sbjct: 427 AIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIK 486
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDL 371
G P ++SA + + +A E +L
Sbjct: 487 YGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 519
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/207 (19%), Positives = 78/207 (37%)
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL 221
+ ++ + YTK++HG K ++++A L M + D TLTV+V +
Sbjct: 31 MNDAHPPDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRV 90
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
A E EE+ G + +Y ++V + LD L+ M + Y ++
Sbjct: 91 DDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSI 150
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+ G+ + A E + G PD LI + + + + + G
Sbjct: 151 ITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGF 210
Query: 342 EPSDKCVALILSACEKENQLNRALEFL 368
P + ++ K +L A++
Sbjct: 211 TPDIVTYSTVIDGLCKAGRLRDAVDIF 237
>gi|326502598|dbj|BAJ98927.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 733
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 89/189 (47%), Gaps = 8/189 (4%)
Query: 157 AELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFIC-----DQVTLTVM 211
+E+ LL ++ N R YT ++ GY ++ + AM+R G D VT T +
Sbjct: 353 SEVPLLSRTYPPNSRVYTTLMKGYMNAGRVDDVVAMARAMRREGETMPASRPDHVTYTTV 412
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
V + AG+++ A +E+ G P + +Y ++ Y + + R LL EM +
Sbjct: 413 VSTLAAAGDMERAHAVLDEMARAGVPASRVTYNVLIKGYCQQLQMSRARELLEEM-TTDA 471
Query: 272 YVGSEV--YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
+ ++V Y L+ G + +S GA +F ++ G+ P L+ A+ +GQ + A
Sbjct: 472 GIEADVVTYNTLIDGCVLMDDSAGALALFNEMRARGVAPSTVSYTTLMKAFAASGQPKVA 531
Query: 330 YTAFQNMRK 338
+ F+ M K
Sbjct: 532 HNVFEEMEK 540
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 99/241 (41%), Gaps = 24/241 (9%)
Query: 160 ALLEESFEANIR----DYTKIIHGYGKKMQIQNAENTLLAMKRR-GFICDQVTLTVM--- 211
A+L+E A + Y +I GY +++Q+ A L M G D VT +
Sbjct: 427 AVLDEMARAGVPASRVTYNVLIKGYCQQLQMSRARELLEEMTTDAGIEADVVTYNTLIDG 486
Query: 212 -VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQ- 269
V+M AG L + F E++ G SY +++ A+ +G + EM+
Sbjct: 487 CVLMDDSAGALAL----FNEMRARGVAPSTVSYTTLMKAFAASGQPKVAHNVFEEMEKDP 542
Query: 270 EVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
V V + L+ GY G E A++ E ++ +G+ PD L +A + +A
Sbjct: 543 RVTVDRPAWNMLVEGYCQQGMLETAKQTVERMKESGVQPDVATYGSLAKGIAVARKPGEA 602
Query: 330 YTAFQNMR----------KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
+ ++ K GL P ++ + + C + +ALE + +E +G
Sbjct: 603 LLLWNEVKERCEAGSGNGKPGLRPDEELLDALADVCVRGAFFKKALEIVACMEENGIAPN 662
Query: 380 K 380
K
Sbjct: 663 K 663
>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
Length = 826
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 2/206 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E E ++ Y +I+G K +++ AE L RRG ++ + T ++ +SK G
Sbjct: 333 MIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGE 392
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A E E+ G LD +YG++V V AG +D + +M + + + +Y
Sbjct: 393 YVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNV 452
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G G A+++ + +TPDA + A L++ + G +A FQ + G
Sbjct: 453 LMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERG 512
Query: 341 LEPS-DKCVALILSACEKENQLNRAL 365
++ S +C A+I C K +N AL
Sbjct: 513 IDTSVVECNAMIKGYC-KYGMMNDAL 537
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 91/239 (38%), Gaps = 12/239 (5%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +IH + K + A L+ M RG D + +V AG + +A +++
Sbjct: 380 YTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMM 439
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D Y ++ + G + LL EM Q V + V L+ G+ +GN +
Sbjct: 440 ERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLD 499
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+++F+ GI C +I Y G A F+ M P + + I+
Sbjct: 500 EAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTII 559
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAW------FKRLGVVEEVEHVLRE 405
K+N L AL G M+ K + + F R G + E V E
Sbjct: 560 DGYVKQNDLRGALRMF------GLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEE 612
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 113/244 (46%), Gaps = 7/244 (2%)
Query: 137 DWLAVLKQLKLMEHPLYLQVAELALLEESFEAN--IRDYTKII--HGYGKKMQIQNAENT 192
D A L L+ H +++A + +E + N + +YT I G K+ +++ +
Sbjct: 166 DVFACNSLLNLLVHHGKVEIAR-KVYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHL 224
Query: 193 LLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVR 252
+ +G + + V ++ Y K G+++ A F+E+K+ G ++YG+M+ A+ +
Sbjct: 225 IEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCK 284
Query: 253 AGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG-NSEGAQRVFEAIQFAGITPDAR 311
G + + LL EM + + V +++ ++ +G E A V I+ +G PD
Sbjct: 285 KGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIE-SGCEPDMA 343
Query: 312 MCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDL 371
LIN G+ ++A ++ + GL P+ ++ A K + RA E LI++
Sbjct: 344 TYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEM 403
Query: 372 ERDG 375
G
Sbjct: 404 SERG 407
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 4/203 (1%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
+ANI Y ++ G KK + A+ L+ M + D +V + + GNL A++
Sbjct: 446 DANI--YNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKK 503
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE-VYKALLRGY 285
F+ G +M+ Y + GM++ + + M V+ E Y ++ GY
Sbjct: 504 LFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRM-FNGVHSPDEFTYSTIIDGY 562
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
+ GA R+F + P+ LIN + G +A F+ MR G EP+
Sbjct: 563 VKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNV 622
Query: 346 KCVALILSACEKENQLNRALEFL 368
+++ KE +L +A F
Sbjct: 623 VTYTILIGYFCKEGKLTKACFFF 645
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/242 (19%), Positives = 100/242 (41%), Gaps = 2/242 (0%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGF-ICDQVTLTVMVVMYSKAGNLK 222
+ F ++ Y +I+ + KK + + + L+ MK RG + Q+ ++ + ++
Sbjct: 266 KGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIE 325
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A+ I+ EP D +Y +++ G + E LL + ++ Y L+
Sbjct: 326 AADAVRWMIESGCEP-DMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLI 384
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
+S NG A + + G T D L++ +AG+ A T M + G+
Sbjct: 385 HAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGIL 444
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P +++S K+ + A + L+++ + TL F R G ++E + +
Sbjct: 445 PDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKL 504
Query: 403 LR 404
+
Sbjct: 505 FQ 506
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 82/212 (38%), Gaps = 11/212 (5%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
++ G+ + + A+ RG V M+ Y K G + A F+ +
Sbjct: 488 LVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGV 547
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
D+ +Y +++ YV+ L + M + + +L+ G+ NG+ A+
Sbjct: 548 HSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAE 607
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
+VFE ++ G P+ +LI + G+ KA F+ M P+D +++
Sbjct: 608 KVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGL 667
Query: 356 EKEN-----------QLNRALEFLIDLERDGF 376
N Q N LEF + DG+
Sbjct: 668 TNNNGIAISSKRSNSQPNLTLEFFGMMISDGW 699
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 98/246 (39%), Gaps = 6/246 (2%)
Query: 153 YLQVAELALLEESFEANIRD---YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLT 209
Y++ +EL L+E S + D Y ++HG ++ A M RG + D
Sbjct: 393 YVRASEL-LIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYN 451
Query: 210 VMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQ 269
V++ K G A++ E+ D ++V ++R G LD + L + +
Sbjct: 452 VLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIER 511
Query: 270 EVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGI-TPDARMCALLINAYQMAGQSQK 328
+ A+++GY G A F+ + F G+ +PD + +I+ Y +
Sbjct: 512 GIDTSVVECNAMIKGYCKYGMMNDALLCFKRM-FNGVHSPDEFTYSTIIDGYVKQNDLRG 570
Query: 329 AYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAA 388
A F M K +P+ +++ + LNRA + ++ GF L
Sbjct: 571 ALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIG 630
Query: 389 WFKRLG 394
+F + G
Sbjct: 631 YFCKEG 636
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 53/116 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ II GY K+ ++ A M ++ + VT T ++ + + G+L AE+ FEE++
Sbjct: 555 YSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMR 614
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
G + +Y ++ + + G L + +M + + L+ G + N
Sbjct: 615 SFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGLTNN 670
>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g31400, chloroplastic; Flags: Precursor
gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
Length = 918
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 90/199 (45%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y+ +I G+ K + A N M+ G D+V+ ++ +Y+K G + A +
Sbjct: 408 NVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDIL 467
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E+ +G D +Y +++ Y + G D + + EM + V Y L+ GYS
Sbjct: 468 REMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKG 527
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A +F + AG+ D + + LI+A G A + M K G+ P+
Sbjct: 528 GLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTY 587
Query: 349 ALILSACEKENQLNRALEF 367
I+ A + ++R+ ++
Sbjct: 588 NSIIDAFGRSATMDRSADY 606
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 97/209 (46%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E ++ Y ++ K Q+ A L M + + + V+ + ++ ++KAG A
Sbjct: 371 EQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALN 430
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
F E++ LG LD+ SY +++ Y + G + +LREM + + Y ALL GY
Sbjct: 431 LFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYG 490
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G + ++VF ++ + P+ + LI+ Y G ++A F+ + AGL
Sbjct: 491 KQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVV 550
Query: 347 CVALILSACEKENQLNRALEFLIDLERDG 375
+ ++ A K + A+ + ++ ++G
Sbjct: 551 LYSALIDALCKNGLVGSAVSLIDEMTKEG 579
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 110/254 (43%), Gaps = 4/254 (1%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKK-MQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
++ E N+ Y +I GK M+ + M+R G D++T ++ + S+
Sbjct: 293 SMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRG 352
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
G + A F+E+ D SY +++ A + G +D +L +M + + Y
Sbjct: 353 GLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSY 412
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
++ G++ G + A +F +++ GI D L++ Y G+S++A + M
Sbjct: 413 STVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMAS 472
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
G++ +L K+ + + + +++R+ + TL + + G+ +E
Sbjct: 473 VGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKE 532
Query: 399 VEHVLREY---GLR 409
+ RE+ GLR
Sbjct: 533 AMEIFREFKSAGLR 546
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Query: 294 AQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILS 353
A+R+FE G + LI+AY +G ++A + F +M++ GL P+ ++
Sbjct: 252 AKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVID 311
Query: 354 ACEKEN-QLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
AC K + + +F +++R+G + +L A R G+ E ++ E
Sbjct: 312 ACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDE 364
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 90/207 (43%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
NI YT I+ G K+ + + A L MK +G D +++ + KAG ++ +
Sbjct: 476 NIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYL 535
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E+ G + +YG+ + Y RAG + E EM + + L+ GY +
Sbjct: 536 VEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKD 595
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
GN+ A F + G+ PD + ++LI+ G+ Q+A F + GL P
Sbjct: 596 GNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTY 655
Query: 349 ALILSACEKENQLNRALEFLIDLERDG 375
++S KE L A E D+ + G
Sbjct: 656 TSLISNLCKEGDLKAAFELHDDMCKKG 682
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 102/244 (41%), Gaps = 35/244 (14%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I+ Y +I GY K ++ A L+ +K+ + +V G+L A E F
Sbjct: 406 DIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELF 465
Query: 229 EE-----------------------------IKLLGEPLDKR------SYGSMVMAYVRA 253
+E IK+LG D+ Y ++++ + +A
Sbjct: 466 QEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKA 525
Query: 254 GMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
G ++ G+ L EM A+ + Y A + GY G + A+R F + +GI P+ +C
Sbjct: 526 GKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVIC 585
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
LI+ Y G + KA+ F+ M G+ P + ++++ K +L A+ +L
Sbjct: 586 TDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLD 645
Query: 374 DGFM 377
G +
Sbjct: 646 KGLV 649
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 110/246 (44%), Gaps = 1/246 (0%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+L++ +++ ++ +IHG K ++Q A + +G + D T T ++ K G
Sbjct: 607 CMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEG 666
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+LK A E +++ G + +Y +++ + G + + L + + + S Y
Sbjct: 667 DLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYS 726
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
++ GY + N A ++F ++ G+ PD+ + LI+ AG ++KA + F M +
Sbjct: 727 TIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEE 786
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEV 399
G+ + ALI K +L A + + D+ + L + +G ++E
Sbjct: 787 GIASTPAFNALI-DGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEA 845
Query: 400 EHVLRE 405
E + E
Sbjct: 846 EQLFME 851
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 99/233 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G+ ++ + ++ L M G D V T ++ + K ++ A + EE+
Sbjct: 305 YATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMF 364
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
L+ +Y +++ + G L++ E L EM + + Y L+ GY N E
Sbjct: 365 ARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNME 424
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + I+ +T +A MC ++N G +A FQ M GL+P+ I+
Sbjct: 425 KAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIV 484
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
KE + A++ L ++ G T+ F + G +EE + L E
Sbjct: 485 KGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVE 537
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 102/275 (37%), Gaps = 34/275 (12%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN-- 220
E+ N Y+ II GY K + A MK G D ++ KAGN
Sbjct: 715 EKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTE 774
Query: 221 ------LKMAEE--------------------TFEEIKLLGEPLDKR------SYGSMVM 248
L M EE E +L+ + +D +Y ++
Sbjct: 775 KALSLFLGMVEEGIASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIE 834
Query: 249 AYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITP 308
+ G + E L EM + V Y +LL GY+ G +F+ + GI P
Sbjct: 835 YHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKP 894
Query: 309 DARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFL 368
D +++++A+ G KA +M G+ +++ A K N L+ L+ L
Sbjct: 895 DDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVL 954
Query: 369 IDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
++E+ G + TL F R G +E VL
Sbjct: 955 DEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVL 989
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/277 (19%), Positives = 103/277 (37%), Gaps = 35/277 (12%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + + N+ Y IHGY + ++Q AE + + M G + V T ++ Y K GN
Sbjct: 538 MIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGN 597
Query: 221 LKMAEETF-----------------------------EEIKLLGEPLDKR------SYGS 245
A F E + + E LDK +Y S
Sbjct: 598 TTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTS 657
Query: 246 MVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAG 305
++ + G L L +M + + Y AL+ G G A+ +F+ I G
Sbjct: 658 LISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKG 717
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
+ ++ + +I Y + +A+ F M+ G+ P ++ C K +AL
Sbjct: 718 LARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKAL 777
Query: 366 EFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
+ + +G + + +FK ++E + V
Sbjct: 778 SLFLGMVEEGIASTPAFNALIDGFFKLGKLIEAYQLV 814
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 90/204 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I+G+ K+ I A M R + T ++ K G+L+ AE+ F E+
Sbjct: 340 YTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMT 399
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
++G D ++Y ++ Y + +++ LL E+ + + + + A++ G G+
Sbjct: 400 MMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLT 459
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +F+ + G+ P+ + ++ G+ ++A M+ GL P C ++
Sbjct: 460 RANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVI 519
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
K ++ +L+++ G
Sbjct: 520 IGFCKAGKMEEGKSYLVEMIAKGL 543
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 93/217 (42%), Gaps = 6/217 (2%)
Query: 131 MKPRRADWLAVLKQ-LKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNA 189
+KP + A++ +K + QV E + + N Y +IHG K ++ A
Sbjct: 333 LKPDHVAYTALINGFVKQSDIGGAFQVKE-EMFARKIKLNTFTYYALIHGLCKIGDLEKA 391
Query: 190 ENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSY--GSMV 247
E+ M G D T ++ Y K N++ A E EIK E L +Y G++V
Sbjct: 392 EDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIK--KENLTANAYMCGAIV 449
Query: 248 MAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGIT 307
G L R L +EM + + +Y +++G G E A ++ ++ G++
Sbjct: 450 NGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLS 509
Query: 308 PDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
PD +I + AG+ ++ + M GL+P+
Sbjct: 510 PDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPN 546
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 82/200 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y+ +I G + + A +M +G + D ++ + + +
Sbjct: 266 NLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSML 325
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+ +G D +Y +++ +V+ + + EM A+++ + + Y AL+ G
Sbjct: 326 DEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKI 385
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G+ E A+ +F + GI PD + LI Y +KAY ++K L +
Sbjct: 386 GDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMC 445
Query: 349 ALILSACEKENQLNRALEFL 368
I++ L RA E
Sbjct: 446 GAIVNGLCHCGDLTRANELF 465
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/128 (20%), Positives = 59/128 (46%)
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
D +Y +++ AY R G ++ G+ +L +M+ + Y ++ G G+ + A +
Sbjct: 231 DVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELK 290
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
++ G+ PD + A LI+ + +S + + M GL+P +++ K+
Sbjct: 291 RSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQ 350
Query: 359 NQLNRALE 366
+ + A +
Sbjct: 351 SDIGGAFQ 358
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 95/216 (43%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+ E E ++ Y+ +++GY + ++ A AM +G D + +++ Y K
Sbjct: 333 TMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVK 392
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ A++ F E+ G + SY +++ + G L L + M Y
Sbjct: 393 RIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYS 452
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
LL G+ G A R+F A+Q P+ M +LI+A +G + A F +
Sbjct: 453 ILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVK 512
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
GL+P+ + I++ KE L+ ALE ++E DG
Sbjct: 513 GLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDG 548
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 101/230 (43%), Gaps = 4/230 (1%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
A++ + + ++ Y +I+GY K +I A+ M +G + V+ ++ + G
Sbjct: 368 AMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLG 427
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+L+ A F+ + G + +Y ++ + + G + L R M + +Y
Sbjct: 428 SLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYN 487
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ +GN A+++F + G+ P+A++ +IN G +A AF+NM +
Sbjct: 488 ILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEED 547
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAW 389
G P + +I+ +RA++ + ++ GF+ A AW
Sbjct: 548 GCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFI----ADVGTTAW 593
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 99/252 (39%), Gaps = 2/252 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E + N+ Y+ II + K ++ A + MK +G D T ++ K
Sbjct: 231 EAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWK 290
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A E++ L D ++ +V + G + + +L+ M V Y +L+
Sbjct: 291 EASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLM 350
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
GYS+ A+++F+A+ G PD +LIN Y + +A F M GL
Sbjct: 351 YGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLT 410
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P++ ++ + L A ++ +G + L F + G + +
Sbjct: 411 PNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRL 470
Query: 403 LREYGLRETYSK 414
R ++ TYSK
Sbjct: 471 FR--AMQSTYSK 480
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 93/237 (39%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ YT II+G K + A L M+ G + VT + ++ + K + A + F
Sbjct: 202 DVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIF 261
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+K+ G D +Y S++ LL EM + + + L+
Sbjct: 262 SYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKE 321
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G AQ V + + G+ PD + L+ Y + + +A F M G +P
Sbjct: 322 GKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSY 381
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++++ K +++ A + ++ G + TL +LG + E ++ +
Sbjct: 382 NILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKN 438
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 38/196 (19%), Positives = 77/196 (39%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
NI + +I+ + ++ A + L + + G VT T ++ K G A E F
Sbjct: 132 NIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELF 191
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+++ G D +Y +++ + G LL++M+ Y ++ + +
Sbjct: 192 DDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKD 251
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
A +F ++ GI+PD LI Q ++A MR + P
Sbjct: 252 RRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTF 311
Query: 349 ALILSACEKENQLNRA 364
+++ KE +++ A
Sbjct: 312 NVLVDTICKEGKVSEA 327
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 99/216 (45%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + E NI Y+ +I+ Y K ++ N + +G + D VT +V + ++G
Sbjct: 375 MVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGK 434
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L +A+E F+E+ G P +YG ++ G L + + +M + +G +Y
Sbjct: 435 LNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNI 494
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G + A +F ++ G+ PD ++I G +A F+ M++ G
Sbjct: 495 IIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDG 554
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
PSD +++ A + + ++E + +++ GF
Sbjct: 555 CAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGF 590
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 105/234 (44%), Gaps = 7/234 (2%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I G+ K+ ++ A L M +G + VT ++++ Y KA + F EI
Sbjct: 352 YSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEIS 411
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y ++V + ++G L+ + L +EM ++ V Y LL G NG +
Sbjct: 412 SKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQ 471
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +FE +Q + + + ++I+ A + A++ F ++ G++P +++
Sbjct: 472 KALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMI 531
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCT----LAAWFKRLGVVEEVEHV 402
K+ L+ A ++ DG + CT + A GV+ VE +
Sbjct: 532 GGLCKKGSLSEADMLFRKMKEDGC---APSDCTYNILIRAHLGGSGVISSVELI 582
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 89/216 (41%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ +A++ Y+ II G + + L M R I + VT + ++ ++ K G L
Sbjct: 273 KGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLE 332
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A+E + E+ G D +Y S++ + + L +L M ++ Y L+
Sbjct: 333 AKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILIN 392
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
Y + R+F I G+ D L+ + +G+ A FQ M G+ P
Sbjct: 393 SYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPP 452
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
S ++L +L +ALE +++ ++G
Sbjct: 453 SVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILG 488
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 98/239 (41%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
EAN Y +++ K A + M+ R V ++++ K GNL A
Sbjct: 206 EANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALS 265
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
F E+++ G D +Y S++ G D G +LREM + + + AL+ +
Sbjct: 266 LFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFV 325
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G A+ ++ + GI PD + LI+ + + +A M G EP+
Sbjct: 326 KEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIV 385
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++++++ K +++ + ++ G + TL F + G + + + +E
Sbjct: 386 TYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQE 444
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 107/229 (46%), Gaps = 8/229 (3%)
Query: 153 YLQVAEL----ALLEESFEANIR----DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICD 204
Y QV +L ++ E+ +IR Y +I+G K I AE+ ++ M++ G
Sbjct: 380 YCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPS 439
Query: 205 QVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLR 264
T ++ Y +AG L+ +++ G + S+GS+V A+ + G + +L
Sbjct: 440 VETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILD 499
Query: 265 EMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAG 324
+M ++V ++VY +++ Y +G +E A + E ++ +G++ LL+
Sbjct: 500 DMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNS 559
Query: 325 QSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
Q +A N+ GL P I+SAC + +RALE L ++ +
Sbjct: 560 QIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHK 608
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 98/204 (48%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+GY + +Q A + MK R D +T ++ K + AE+ E++
Sbjct: 373 YNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEME 432
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G ++ +++ AY RAG L++ +L +M + + + ++++ + NG
Sbjct: 433 KSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIP 492
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + + + P+A++ +I+AY +G +++A+ + M+ +G+ S L+L
Sbjct: 493 EAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLL 552
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
K +Q++ A E + +L G
Sbjct: 553 KGLCKNSQIDEAEELIYNLTNQGL 576
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 99/226 (43%)
Query: 129 RFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQN 188
R ++P + A++ L ME + + + + + ++ + +I YG+ Q++
Sbjct: 399 RHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEK 458
Query: 189 AENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVM 248
L M+ +G + ++ +V + K G + A +++ + + Y S++
Sbjct: 459 CFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIID 518
Query: 249 AYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITP 308
AY+ +G ++ +L+ +M + V Y LL+G N + A+ + + G+ P
Sbjct: 519 AYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRP 578
Query: 309 DARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSA 354
D +I+A G + +A Q M K + P+ + +LSA
Sbjct: 579 DVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSA 624
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/268 (20%), Positives = 102/268 (38%), Gaps = 35/268 (13%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G + + +A M RG +Q+T M+ + K G+L+ +++
Sbjct: 198 YNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQML 257
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA------------------------ 268
G + +Y ++ RAG +D L+ EM +
Sbjct: 258 QDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSR 317
Query: 269 -----------QEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
+ V +G+ LL G +G A++V E + G+ P + LI
Sbjct: 318 TMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLI 377
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
N Y Q A++ F+ M+ + P +++ K + A + ++++E+ G
Sbjct: 378 NGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVD 437
Query: 378 VGKEASCTLAAWFKRLGVVEEVEHVLRE 405
E TL + R G +E+ VL +
Sbjct: 438 PSVETFNTLIDAYGRAGQLEKCFTVLSD 465
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 77/175 (44%), Gaps = 2/175 (1%)
Query: 198 RRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLD 257
++G I T ++++ K G + AE+ E + G Y +++ Y + L
Sbjct: 328 KKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQ 387
Query: 258 RGEVLLREMDAQEVYVGSEVYKALLRGY-SMNGNSEGAQRVFEAIQFAGITPDARMCALL 316
+ +M ++ + Y AL+ G M +E V E ++ +G+ P L
Sbjct: 388 GAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVME-MEKSGVDPSVETFNTL 446
Query: 317 INAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDL 371
I+AY AGQ +K +T +M+ G++ + ++ A K ++ A+ L D+
Sbjct: 447 IDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDM 501
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/254 (19%), Positives = 103/254 (40%), Gaps = 18/254 (7%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L++ + N+ Y ++ G + ++ + M + D T +++ ++ G+
Sbjct: 256 MLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGD 315
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYV---------RAGMLDRGEVLLREMDAQEV 271
+ + L GE L K G ++ AY + G + + E +L + +
Sbjct: 316 SRTM------LSLFGESLKK---GVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGL 366
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
+ +Y L+ GY + +GA +FE ++ I PD LIN +A
Sbjct: 367 VPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAED 426
Query: 332 AFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFK 391
M K+G++PS + ++ A + QL + L D++ G + ++ F
Sbjct: 427 LVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFC 486
Query: 392 RLGVVEEVEHVLRE 405
+ G + E +L +
Sbjct: 487 KNGKIPEAVAILDD 500
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 103/216 (47%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + +I +T +I GY K ++ + +RG + + VT +++V + ++G
Sbjct: 336 MVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGK 395
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L++AEE F+E+ LG D +YG ++ G L++ + ++ ++ + +Y
Sbjct: 396 LEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTI 455
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G G E A +F ++ G+ P+ ++I+ G +A + M + G
Sbjct: 456 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 515
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
EP+D ++ A ++ L + + + +++ GF
Sbjct: 516 NEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 551
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 96/215 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + N Y ++ GY + ++ A N L M R D VT T ++ Y K
Sbjct: 301 MITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKR 360
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ + F +I G + +Y +V + ++G L+ E L +EM + V Y
Sbjct: 361 VDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGI 420
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL G NG E A +FE +Q + + D M ++I G+ + A+ F ++ G
Sbjct: 421 LLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKG 480
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
++P+ +++S K+ L+ A L +E DG
Sbjct: 481 VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 515
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 128/315 (40%), Gaps = 17/315 (5%)
Query: 71 DTSMFTWIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQI------ICVSPETGNLSDLL 124
DT+ F + G + + +A+ R + C+ V IC S +T DLL
Sbjct: 134 DTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLL 193
Query: 125 AAWVRFMKPR--RADWLAVLKQLKLMEHPLYLQVAELALLEE----SFEANIRDYTKIIH 178
R M R +AD + + + A ++L +E ++++ Y ++
Sbjct: 194 ----RKMDERNVKADVFTYSTIIDSLCRDGCIDAA-ISLFKEMETKGIKSSLVTYNSLVG 248
Query: 179 GYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPL 238
G K + + L M R I + +T V++ ++ K G L+ A E ++E+ G
Sbjct: 249 GLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISP 308
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
+ +Y S++ Y L +L M + +L++GY + ++F
Sbjct: 309 NTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLF 368
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
I G+ + ++L+ + +G+ + A FQ M G+ P ++L
Sbjct: 369 RKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDN 428
Query: 359 NQLNRALEFLIDLER 373
+L +ALE DL++
Sbjct: 429 GKLEKALEIFEDLQK 443
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/245 (18%), Positives = 100/245 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E + N+ Y I++G K A + L M R D T + ++ + G
Sbjct: 161 MVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGC 220
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A F+E++ G +Y S+V +AG + G LL++M ++++ +
Sbjct: 221 IDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNV 280
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ + G + A +++ + GI+P+ L++ Y M + +A M +
Sbjct: 281 LIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNN 340
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
P ++ K +++ ++ + + G + L F + G +E E
Sbjct: 341 CSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAE 400
Query: 401 HVLRE 405
+ +E
Sbjct: 401 ELFQE 405
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/179 (18%), Positives = 74/179 (41%), Gaps = 8/179 (4%)
Query: 153 YLQVAELALLEESFE--------ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICD 204
+ Q +L + EE F+ ++ Y ++ G +++ A +++ D
Sbjct: 390 FCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLD 449
Query: 205 QVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLR 264
V T+++ K G ++ A F + G + +Y M+ + G L +LLR
Sbjct: 450 IVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 509
Query: 265 EMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
+M+ Y L+R + +G+ + ++ E ++ G + DA ++I+ A
Sbjct: 510 KMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLSSA 568
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 80/172 (46%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +IHG + ++ A M +G D+VT T ++ Y KAG +K A ++
Sbjct: 395 YTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMV 454
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +Y ++V + G +D LL EM + + Y AL+ G GN E
Sbjct: 455 EKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIE 514
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A ++ E + AG PD +++AY G+ KA+ + M GL+P+
Sbjct: 515 QAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPT 566
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 107/244 (43%), Gaps = 3/244 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y I+H + +++ A + L+ M+ RG + D V+ +V+V Y + L +
Sbjct: 251 NTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLM 310
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
EE++ G ++ +Y S++ + G + E +LR M Q ++ + VY L+ G+ +
Sbjct: 311 EELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKS 370
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
GN ++F+ ++ I PD +I+ AG+ +A F M GL+P +
Sbjct: 371 GNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTY 430
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE---EVEHVLRE 405
++ K ++ A + G L + G V+ E+ H + E
Sbjct: 431 TALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSE 490
Query: 406 YGLR 409
GL+
Sbjct: 491 KGLQ 494
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 117/270 (43%), Gaps = 11/270 (4%)
Query: 153 YLQVAELA----LLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICD 204
Y QV +L L+EE + N Y II K ++ AE L MK + D
Sbjct: 297 YCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPD 356
Query: 205 QVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLR 264
V T ++ + K+GN+ + + F+E+K D +Y SM+ +AG + L
Sbjct: 357 NVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFS 416
Query: 265 EMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAG 324
EM ++ + Y AL+ GY G + A + + G+TP+ L++ G
Sbjct: 417 EMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCG 476
Query: 325 QSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASC 384
+ A M + GL+P+ +++ K + +A++ + +++ GF
Sbjct: 477 EVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYT 536
Query: 385 TLAAWFKRLGVVEEVEHVLR---EYGLRET 411
T+ + ++G + + +LR + GL+ T
Sbjct: 537 TIMDAYCKMGEMAKAHELLRIMLDKGLQPT 566
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 103/245 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E+ N+ YT ++ G K ++ A L M +G + T ++ K GN
Sbjct: 453 MVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGN 512
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ A + EE+ L G D +Y +++ AY + G + + LLR M + + +
Sbjct: 513 IEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNV 572
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G+ M+G E +R+ + + GI P+A L+ Y + + ++ M G
Sbjct: 573 LMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQG 632
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+ P +++ K + A ++ GF + + +L F + EE
Sbjct: 633 VVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEAR 692
Query: 401 HVLRE 405
+ E
Sbjct: 693 KLFEE 697
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 74/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I GY K +++ A + M +G + VT T +V K G + +A E E+
Sbjct: 430 YTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMS 489
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +Y +++ + G +++ L+ EMD + + Y ++ Y G
Sbjct: 490 EKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMA 549
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A + + G+ P +L+N + M+G + + M G+ P+
Sbjct: 550 KAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPN 601
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/159 (15%), Positives = 72/159 (45%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L++ + I + +++G+ +++ E + M +G + + T ++ Y N
Sbjct: 558 MLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNN 617
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ E ++ + G D +Y ++ + +A + L +EM + + + Y +
Sbjct: 618 MRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNS 677
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
L++G+ E A+++FE ++ G + + + ++
Sbjct: 678 LIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDV 716
>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 613
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 127/328 (38%), Gaps = 53/328 (16%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRD 172
+ P + L+ A+++ M D+ V + L+LME + N
Sbjct: 246 IKPNVVTYNTLVNAYIKIM-----DFEGVNEMLRLMEM-------------DKVVYNAAT 287
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I YG +I AE M RG D T ++ K GN+K A F+E+
Sbjct: 288 YTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRAFALFDELN 347
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +YG+++ +G LD E+L+ EM +Q + + ++ L+ GY G +
Sbjct: 348 ERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMID 407
Query: 293 GAQRV--------FEAIQFA---------------------------GITPDARMCALLI 317
A R+ FE F G+ P+A ++I
Sbjct: 408 EALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMI 467
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
+ + G +A FQ+M+K G +P+ ++ K+ +L A ++E G
Sbjct: 468 DIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMT 527
Query: 378 VGKEASCTLAAWFKRLGVVEEVEHVLRE 405
TL G VEE +L E
Sbjct: 528 SDIYTYTTLVHGECVFGKVEEALTLLNE 555
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 90/195 (46%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
++ FE +I Y I G K + + A+ L M +G + V+ T+M+ ++ K GNL
Sbjct: 418 KKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLV 477
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
AE F+++K GE + +Y +++ Y + G L L EM++ + Y L+
Sbjct: 478 EAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLV 537
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G + G E A + + G+ +I+ G+S++A+ + M AGL
Sbjct: 538 HGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAGLT 597
Query: 343 PSDKCVALILSACEK 357
P D+ +++ K
Sbjct: 598 PDDRVYTSLVANLHK 612
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 80/159 (50%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
++E+ + N +T +I + K+ + AE MK++G + VT ++ YSK
Sbjct: 449 FTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKK 508
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
G LK A +E++ +G D +Y ++V G ++ LL E+ + + + Y
Sbjct: 509 GKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTY 568
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
A++ G S G SE A R+++ + AG+TPD R+ L+
Sbjct: 569 TAIISGLSKEGRSEEAFRLYDEMMAAGLTPDDRVYTSLV 607
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 80/184 (43%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
L + + + N+ Y +++ Y K M + L M+ + + T T+++ Y +
Sbjct: 239 LEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRLMEMDKVVYNAATYTLLIEWYGSS 298
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
G + AE+ FE++ G D + S++ + G + R L E++ + + + Y
Sbjct: 299 GKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTY 358
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
AL+ G +G + A+ + +Q G+ + + LIN Y G +A M K
Sbjct: 359 GALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEK 418
Query: 339 AGLE 342
G E
Sbjct: 419 KGFE 422
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 143/337 (42%), Gaps = 41/337 (12%)
Query: 103 CKAFVKQIICVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALL 162
C A K + C + +L D RF +P+ + L + L+ + ++
Sbjct: 116 CYAMDKNLRCSVSDFVSLID-----NRFHEPKFVEKLCDM---------LFRVYVDNSMF 161
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR-------GFICDQVTLTVMVVMY 215
EE F+ + DY ++H G K+ ++ LLA+KR GF V V V +Y
Sbjct: 162 EEGFK--VFDY--MVHN-GLKIDDRSCIVCLLALKRSDQMVMSLGFFKKMVEFKVDVTVY 216
Query: 216 S---------KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
S K G ++ A++ E+ G + +Y ++V AY++ + +LR M
Sbjct: 217 SMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRLM 276
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
+ +V + Y L+ Y +G A++VFE + G+ D + +I+ G
Sbjct: 277 EMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNM 336
Query: 327 QKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
++A+ F + + GL + ++ QL+ A + +++ G + TL
Sbjct: 337 KRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTL 396
Query: 387 AAWFKRLGVVEE---VEHVLREYGLRE---TYSKIPG 417
+ + G+++E ++ V+ + G TY+ I G
Sbjct: 397 INGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAG 433
>gi|242082329|ref|XP_002445933.1| hypothetical protein SORBIDRAFT_07g028280 [Sorghum bicolor]
gi|241942283|gb|EES15428.1| hypothetical protein SORBIDRAFT_07g028280 [Sorghum bicolor]
Length = 498
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 152 LYLQVAELALLEESFE-----ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQV 206
+Y + A + FE A++ + ++ GY K +I NA M R + V
Sbjct: 137 MYAAFRDTASMRAVFESCAEVADVVSWNTVVFGYAKCGEIGNARRVFDEMPHR----NGV 192
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
+ +VMV Y+ AG L +A E F+ + +G + ++ MV + R G+L + EM
Sbjct: 193 SWSVMVGAYAAAGELDVAREMFDRMPAIGR--NIITWNLMVTGFGRHGLLPLARKMFDEM 250
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
+ + + A+LRGY+MNG + A+ +F+ + D +I+ Y AG+
Sbjct: 251 PIRNIVS----WNAMLRGYAMNGEMDVARELFDVMP----EKDVVSWTCMISGYAQAGRY 302
Query: 327 QKAYTAFQNMRKAG-LEPSDKCVALILSACEKENQL 361
+ F+ M+ G + P++ + +LSAC L
Sbjct: 303 AQTLELFRTMQSHGDIRPNEVTMVSVLSACAHLTAL 338
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 45/242 (18%), Positives = 105/242 (43%), Gaps = 16/242 (6%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
NI + ++ GY ++ A M + D V+ T M+ Y++AG E F
Sbjct: 254 NIVSWNAMLRGYAMNGEMDVARELFDVMPEK----DVVSWTCMISGYAQAGRYAQTLELF 309
Query: 229 EEIKLLGE--PLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE--VYKALLRG 284
++ G+ P ++ + S++ A L+ G +D ++ + +E + AL+
Sbjct: 310 RTMQSHGDIRP-NEVTMVSVLSACAHLTALEEGRWAHVFIDKHKMVLDNEFNLGAALIDM 368
Query: 285 YSMNGNSEGAQRVFEAIQFAGITP-DARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
Y+ G ++ A ++F ++ ++ +A + L +N+ +++ F+ M+ + +P
Sbjct: 369 YAKCGRTDLATKIFHSLDQKNVSAWNALITGLAVNS-----DARRCIDVFEQMKMSEEKP 423
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERD-GFMVGKEASCTLAAWFKRLGVVEEVEHV 402
D +L+AC ++ ++ + G + + R G+++E E +
Sbjct: 424 DDITFVSVLTACAHAGLVDEGRQYFQSMSSACGVQPELKHYGCMVDLLGRAGLLDEAEEL 483
Query: 403 LR 404
+R
Sbjct: 484 IR 485
>gi|225439751|ref|XP_002273172.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like [Vitis vinifera]
Length = 749
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 94/195 (48%), Gaps = 4/195 (2%)
Query: 146 KLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFIC-- 203
KL+ + + +E LL +++ + R YT ++ GY K+ ++ + L AM+ +
Sbjct: 357 KLLPNSVERNNSEPPLLPKAYAPDSRIYTTLMKGYMKEGRVTDTVRMLEAMRHQDDSTSQ 416
Query: 204 -DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVL 262
D VT T +V KAG++ A + E+ +G P ++ +Y ++ Y +D+ + L
Sbjct: 417 PDHVTYTTVVSALVKAGSMDRARQVLAEMTRIGVPANRVTYNILLKGYCEQLQIDKAKEL 476
Query: 263 LREMDAQEVYVGSEV-YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQ 321
+REM E V V Y L+ G + +S GA F ++ GI P L+ A+
Sbjct: 477 VREMVDDEGIVPDVVSYNTLIDGCILVDDSAGALAYFNEMRARGIAPTKISYTTLMKAFA 536
Query: 322 MAGQSQKAYTAFQNM 336
++GQ + A F M
Sbjct: 537 LSGQPKLANKVFDEM 551
>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
Length = 806
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 95/208 (45%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
E + +I Y II G+ K I+ A+ L + RG + ++ Y + G++
Sbjct: 566 EGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISG 625
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A + E +K G +YGS++ AG+++ + + + V +G Y +++
Sbjct: 626 AIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQ 685
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
GY G A FE ++ GI+P+ L+ AY +G S++A F M +G+ P
Sbjct: 686 GYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIP 745
Query: 344 SDKCVALILSACEKENQLNRALEFLIDL 371
+ +++ C + N L++ + +L
Sbjct: 746 DNITYGTLIARCSEVNSLDKDIGHTAEL 773
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 103/246 (41%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+L + E + Y +I G K +++ A M RRGF D T ++ Y G
Sbjct: 492 TMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLG 551
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ +++K G D SYG+++ + +A + + + L E+ + + +Y
Sbjct: 552 KMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYN 611
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
AL+ GY NG+ GA E ++ GI P L+ AG ++A T F R+
Sbjct: 612 ALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQAREN 671
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEV 399
++ +++ K ++ A+ + ++ G K TL + + G EE
Sbjct: 672 NVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEA 731
Query: 400 EHVLRE 405
+ E
Sbjct: 732 SKLFDE 737
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 67/149 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L++ + N+ Y +I GYG+ I A + + MK G VT ++ AG
Sbjct: 598 LMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGL 657
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ A+ F + + L Y M+ Y + G + EM ++ + Y
Sbjct: 658 VEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTT 717
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPD 309
L+ YS +GNSE A ++F+ + +G+ PD
Sbjct: 718 LMYAYSKSGNSEEASKLFDEMVGSGVIPD 746
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/245 (19%), Positives = 100/245 (40%), Gaps = 7/245 (2%)
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL 221
L + N+ +IHG + ++ A + M +G D +T +M+ K +
Sbjct: 459 LNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKM 518
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
+ A + ++ G D ++ +++ AY G ++ LL +M + + Y +
Sbjct: 519 EEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTI 578
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+ G+ + A+ + G+ P+ + LI Y G A A + M+ G+
Sbjct: 579 IDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGI 638
Query: 342 EPSDKCV-ALILSAC------EKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
+P++ +L+ C E + ++A E +DL G+ + + C L + +
Sbjct: 639 QPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVA 698
Query: 395 VVEEV 399
EE+
Sbjct: 699 YFEEM 703
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 1/130 (0%)
Query: 217 KAGNLKMAEETFEEIK-LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
+AG L A E F+E++ L++ SY +M+ A +AG +D G +L E+ +
Sbjct: 197 RAGQLDAAREVFDEMRESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTV 256
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
Y L+ +G E A R+ ++ G+TP +LIN + + Q
Sbjct: 257 VTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQE 316
Query: 336 MRKAGLEPSD 345
M + G+ P++
Sbjct: 317 MEQLGVSPNE 326
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 39/193 (20%), Positives = 82/193 (42%), Gaps = 1/193 (0%)
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM-DAQEVYVGSEV 277
G+L A + F + G P ++ + + A VRAG LD + EM +++ V +
Sbjct: 164 GSLCRAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYS 223
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y A+++ G + + + AG+ P +L++A +G+ ++A+ M
Sbjct: 224 YTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRME 283
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
+ G+ PS ++++ + + L ++E+ G + L W R G
Sbjct: 284 QGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCS 343
Query: 398 EVEHVLREYGLRE 410
+ + E L++
Sbjct: 344 QALRLFDEMVLKK 356
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 57/122 (46%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E + + + YT +I GY K ++ A M+ RG +++T T ++ YSK+GN +
Sbjct: 670 ENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSE 729
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A + F+E+ G D +YG+++ LD+ E+ + + +Y L
Sbjct: 730 EASKLFDEMVGSGVIPDNITYGTLIARCSEVNSLDKDIGHTAELSSGALTKDDRMYNILS 789
Query: 283 RG 284
G
Sbjct: 790 NG 791
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 92/199 (46%), Gaps = 1/199 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+LE+ + Y ++ G+ +K + ++ M R+G + + T ++ + K G+
Sbjct: 183 MLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGD 242
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A F E++ LG P D SY +++ G + LLREM V Y
Sbjct: 243 MVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNI 302
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ GYS +G + A ++F I +G+ PDA + +I+ AG+ A+ F++M G
Sbjct: 303 LIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANG 362
Query: 341 LEPSDKCV-ALILSACEKE 358
P V L++ C E
Sbjct: 363 SAPDAAVVIPLVIGLCRGE 381
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 97/224 (43%), Gaps = 2/224 (0%)
Query: 155 QVAEL--ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMV 212
+ AEL +++ + N+ Y ++ G K +++ A + M RG D V V++
Sbjct: 105 EAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLI 164
Query: 213 VMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY 272
+SK G++ A FEE+ G +Y S++ + R G R + L ++M Q
Sbjct: 165 DGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCV 224
Query: 273 VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTA 332
+ LL G+ G+ A R+F ++ G PD L+ G+ +A
Sbjct: 225 PNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRL 284
Query: 333 FQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+ M ++G+ P +++ K L+ A++ ++ + G
Sbjct: 285 LREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGL 328
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/176 (19%), Positives = 71/176 (40%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y ++ + + + A + M +G + + ++++ + + A E
Sbjct: 51 NTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELL 110
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E+ G + +YGS++ + G L L M + VY L+ G+S
Sbjct: 111 NEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKK 170
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
G+ A R+FE + G P L++ + G+ + + F++M + G P+
Sbjct: 171 GDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPN 226
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ F N+ Y ++HG+ K +++NA L M RG D V+ T ++ K
Sbjct: 256 MVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQ 315
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A +++ G + +YG++V + R G LD L+R+M + + Y
Sbjct: 316 VDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNN 375
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ + + E A +V + + G PDA + +I+ + AG+ ++A+ + M + G
Sbjct: 376 IMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRG 435
Query: 341 LEPSDKCVALILSACEKENQLNRALEFL 368
P C++ ++ A K ++ A E L
Sbjct: 436 CRPDVACLSTLIDALCKAAAIDSAQELL 463
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 87/204 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y ++ G K +I +A M+ G + D VT ++++ + K NL A +
Sbjct: 509 DVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKML 568
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E +K D +Y +++ +AG +D+ + +EM Y L+ G
Sbjct: 569 ERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKI 628
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + E ++ TPD+ LIN A + ++A+ + M+ G P
Sbjct: 629 NKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTY 688
Query: 349 ALILSACEKENQLNRALEFLIDLE 372
+L A +K N L + L ++E
Sbjct: 689 GTLLRALQKTNNLELVEQLLKEME 712
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 122/269 (45%), Gaps = 25/269 (9%)
Query: 154 LQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVV 213
L++ +L L + S+ ++ ++ I K+ +++ A L M R G + D VT ++
Sbjct: 1319 LEILQLLLSKGSY-PDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLK 1377
Query: 214 MYSKAGNLKMAEETFEEIK-------------LLGEPLDKRSYGSMVMAYVRAGMLDRGE 260
+ A + A + FE ++ L+G +DK+SY + +A V M+D G
Sbjct: 1378 GFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDL-LAEVSKSMVDTGF 1436
Query: 261 VLLREMDAQ-----EVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
L E+ ++ EV + A++ + G+ + A++VFE + + + +
Sbjct: 1437 KLNHELSSKLEASIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGMDQRNVV----LWSA 1492
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD- 374
++ Y Q ++A+ ++ M G+EP +L+ C L+ A++ + + RD
Sbjct: 1493 MLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDY 1552
Query: 375 GFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
G G + + RLG+V E E ++
Sbjct: 1553 GLEPGVDHFSCVIDLLGRLGLVNEAEDLM 1581
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 1/187 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ +T +IHG + I A L M R G + + V++ A L A E F
Sbjct: 876 NMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELF 935
Query: 229 EEIKLLGE-PLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
+E++ G P D +Y ++V + V++G +D L+ +M ++ Y +LL G
Sbjct: 936 KEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCK 995
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G + A + + + +G +P+ +I+ + G+ +AY + M G +P+
Sbjct: 996 AGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVT 1055
Query: 348 VALILSA 354
++L A
Sbjct: 1056 YTVLLDA 1062
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 90/221 (40%), Gaps = 1/221 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I Y +I G K ++ A L M G D VT ++++ K + A
Sbjct: 1228 DIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVL 1287
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E + G +YG+++ + + G LD+ +L+ + ++ Y + + S
Sbjct: 1288 ELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKR 1347
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC- 347
G A + E + AG+ PD L+ + A ++ A F+ MR+ G EP +
Sbjct: 1348 GRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATY 1407
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAA 388
L+ +K++ + E + GF + E S L A
Sbjct: 1408 TTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEA 1448
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 87/198 (43%), Gaps = 2/198 (1%)
Query: 172 DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFE-E 230
+Y+ II G+ K +++ A + L M RRG D L+ ++ KA + A+E
Sbjct: 407 NYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMS 466
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
I + P D +Y ++ A +A L E L M Y Y +++ G +
Sbjct: 467 IGMDCAP-DVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRR 525
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
A +F+ ++ AG+ PD +++I+++ A+ + M++A P +
Sbjct: 526 INDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSA 585
Query: 351 ILSACEKENQLNRALEFL 368
+++ K +++A +
Sbjct: 586 LINGLCKAGTVDKAFDVF 603
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 89/210 (42%), Gaps = 1/210 (0%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+++++ N+ Y +I G K ++ L M + D VT ++ K
Sbjct: 1113 SMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTY 1172
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV-Y 278
+ +A E F I+ G + +Y S+V ++ D+ E LLREM ++ + Y
Sbjct: 1173 RVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITY 1232
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
++ G + + A ++F + G+ PD +++I++ +A + M K
Sbjct: 1233 NTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLK 1292
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFL 368
G +P ++ K L++ALE L
Sbjct: 1293 NGFDPGAITYGTLIDGFCKTGNLDKALEIL 1322
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 95/233 (40%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +IH K ++ AE+ L M + D VT +V K+ + A F+ ++
Sbjct: 478 YSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMR 537
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y ++ ++ + LD +L M + Y AL+ G G +
Sbjct: 538 AAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVD 597
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A VF+ + G P+ LI+ + ++A + MRK P ++
Sbjct: 598 KAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLI 657
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ ++L A L +++ G + + TL ++ +E VE +L+E
Sbjct: 658 NGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKE 710
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 76/183 (41%), Gaps = 1/183 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR-GFICDQVTLTVMVVMYSKAGNL 221
E N+ Y ++HG K + AE L M R+ G D +T ++ K+ +
Sbjct: 1186 ESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRV 1245
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
A + F ++ G D +Y ++ + + +D +L M G+ Y L
Sbjct: 1246 DRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTL 1305
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+ G+ GN + A + + + G PD ++ I+ G+ ++A + M +AGL
Sbjct: 1306 IDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGL 1365
Query: 342 EPS 344
P
Sbjct: 1366 VPD 1368
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 88/209 (42%), Gaps = 3/209 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFIC--DQVTLTVMVVMYSKAGNLKMAEE 226
N+ + +I G ++ +A M+ G C D T + +V K+G + A
Sbjct: 911 NVILHNVVIKGLCSARKLDSALELFKEMEESGS-CPPDVFTYSTIVDSLVKSGKVDDACR 969
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
E++ G + +Y S++ +AG LD LL+ M Y ++ G+
Sbjct: 970 LVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHC 1029
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G + A + E + G P+ +L++A+ G+++ A + M + G P+
Sbjct: 1030 KLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLF 1089
Query: 347 CVALILSACEKENQLNRALEFLIDLERDG 375
+L K++++ RA + L + + G
Sbjct: 1090 TYNSLLDMFCKKDEVERACQLLSSMIQKG 1118
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/221 (19%), Positives = 92/221 (41%), Gaps = 5/221 (2%)
Query: 161 LLEESFEA----NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS 216
LLEE + N+ YT ++ + K + ++A + M +G++ + T ++ M+
Sbjct: 1040 LLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFC 1099
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
K ++ A + + G + SY +++ +A + G +LL +M +
Sbjct: 1100 KKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIV 1159
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
+ ++ + A +F IQ +G TP+ L++ + + +A + M
Sbjct: 1160 TFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREM 1219
Query: 337 -RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
RK G P ++ K +++RA + + + DG
Sbjct: 1220 TRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGL 1260
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 60/120 (50%), Gaps = 4/120 (3%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I G K +++ A L M+++ D +T T ++ A L+ A
Sbjct: 614 NLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVL 673
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE----VYVGSEVYKALLRG 284
E+K G D+ +YG+++ A + L+ E LL+EM+A E G+ +++ ++RG
Sbjct: 674 REMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEATEEGQWNANGARLHRFVIRG 733
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 62/151 (41%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
L +L + + Y+ +I K + A N L M + GF +T ++ + K
Sbjct: 1253 LQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKT 1312
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
GNL A E + + G D ++ + + G L + LL M + + Y
Sbjct: 1313 GNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTY 1372
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPD 309
LL+G+ +E A +FE ++ G PD
Sbjct: 1373 NTLLKGFCDASLTEDAVDLFEVMRQCGCEPD 1403
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 89/218 (40%), Gaps = 7/218 (3%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D VT + ++ + +AG + A E F+E+ G + S++ AG +
Sbjct: 160 DTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHF 219
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
REM ++ S Y ++ G S + + A R+ E + G P+ +++ + A
Sbjct: 220 REM-SKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKA 278
Query: 324 GQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEAS 383
+ + A + M G P +++ K +Q++ A + + + G
Sbjct: 279 NRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITY 338
Query: 384 CTLAAWFKRLGVVEEVEHVLR---EYGLRE---TYSKI 415
TL F R+G ++ ++R E G R TY+ I
Sbjct: 339 GTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNI 376
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 100/238 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ YT +I+GY K + A M ++G I D VT ++ G L+ A F
Sbjct: 333 SVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALF 392
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E+ + G+ D +Y + + L VLL+ ++ + +Y ++ G
Sbjct: 393 HEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRA 452
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G E A+ +F + G+ PD R ++IN G +A F M + G P+
Sbjct: 453 GELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTY 512
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREY 406
LI + N+ RA++ ++ GF + + L G+ + V+ +L E+
Sbjct: 513 NLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDGLDQSVKQILCEF 570
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 50/267 (18%), Positives = 107/267 (40%), Gaps = 15/267 (5%)
Query: 114 SPETGNLSDLLAAWVRFMK----PRRADWLAVLKQLKLMEH-----PLYLQVAELALLEE 164
S + D L+ + R ++ P D+ +L + M+H LY Q+ +
Sbjct: 29 SLNVNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHN 88
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA 224
++ NI +I+ + ++ A + L + + G+ T T ++ G + A
Sbjct: 89 TYTLNI-----LINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEA 143
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
+ F+++ G D +YG+++ + G LR M+ + VY ++
Sbjct: 144 LQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDS 203
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
+ A +F + GI+P+ + LI+ + G ++A F M + P
Sbjct: 204 LCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPD 263
Query: 345 DKCVALILSACEKENQLNRALEFLIDL 371
++ A KE + +A +++D+
Sbjct: 264 QLTFNTLVDALCKEGMVVKA-HYVVDV 289
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 67/171 (39%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ II K Q+ A + M +G + T + ++ G+ K A F +
Sbjct: 197 YSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMI 256
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
D+ ++ ++V A + GM+ + ++ M ++ Y +L+ G+ +
Sbjct: 257 HRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMG 316
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
VF+ + G P LIN Y KA F+ M + GL P
Sbjct: 317 KTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIP 367
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 42/101 (41%)
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+ + L+RG + G A ++F+ + G PD LIN G + A +
Sbjct: 124 TATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLR 183
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+M + P+ + I+ + K+ QL AL D+ G
Sbjct: 184 SMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKG 224
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 88/174 (50%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I + +K Q+++A L M +G + + +T ++ Y ++GN+ ++ +++
Sbjct: 159 YSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMM 218
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ D +Y +++ Y++ + LL M+ ++V Y L+ G+S++GN +
Sbjct: 219 VNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQ 278
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
A +FE + GI PD +IN + AG S++A+ M + G P DK
Sbjct: 279 EAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDDK 332
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 83/185 (44%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+L + +I Y +I G ++ + A + M R + VT ++++ + + G
Sbjct: 111 TMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKG 170
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A +E+ G + +Y S++ Y R+G + +G+ L++M +V Y
Sbjct: 171 QVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYN 230
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ GY A ++ ++ + PD +LIN + + G Q+A F+ M
Sbjct: 231 TLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAK 290
Query: 340 GLEPS 344
G+EP
Sbjct: 291 GIEPD 295
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 92/208 (44%), Gaps = 4/208 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y +++G K+ ++ +AE L M+ RG D T T ++ Y G L A + F
Sbjct: 50 DVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLF 109
Query: 229 EEIKLLGEPL--DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
+ +L + L D +Y +++ R G LD+ L +M ++E++ Y L+ +
Sbjct: 110 D--TMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHC 167
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G E A + + GI P+ +I Y +G K Q M + P
Sbjct: 168 EKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLI 227
Query: 347 CVALILSACEKENQLNRALEFLIDLERD 374
++ KE++++ A + L +E++
Sbjct: 228 TYNTLIHGYIKEDKMHDAFKLLNMMEKE 255
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 83/196 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I G+ + + +A M G + D VT ++ K L AE E++
Sbjct: 19 YTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMR 78
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G P D ++ +++ Y G LD+ L M Q + Y L+ G G+ +
Sbjct: 79 ERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLD 138
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +++ + I P+ ++LI+++ GQ + A+ M G+ P+ I+
Sbjct: 139 KANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSII 198
Query: 353 SACEKENQLNRALEFL 368
+ +++ +FL
Sbjct: 199 KGYCRSGNVSKGQKFL 214
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 93/214 (43%), Gaps = 2/214 (0%)
Query: 193 LLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVR 252
L M+ G + D V T+++ + +AG + A +E+ G D +Y +++ +
Sbjct: 4 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 63
Query: 253 AGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARM 312
L E LL EM + V + L+ GY + G + A ++F+ + + PD
Sbjct: 64 ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 123
Query: 313 CALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL-SACEKENQLNRALEFLIDL 371
LI+ G KA + +M + P+ ++++ S CEK Q+ A FL ++
Sbjct: 124 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEK-GQVEDAFGFLDEM 182
Query: 372 ERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
G + ++ + R G V + + L++
Sbjct: 183 INKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQK 216
>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
Length = 764
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 98/221 (44%), Gaps = 4/221 (1%)
Query: 160 ALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
AL EE F + R Y+ +IH K + AMK +G + D ++ +
Sbjct: 431 ALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGF 490
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
K+G + A + EE+K +G +YGS+V + LD +L E + + +
Sbjct: 491 CKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQ 550
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
+Y +L+ G+ G + A V E + G+TP+ L++ A + +A FQ+
Sbjct: 551 VIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQS 610
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
M+ P+ ++++ K + N+A F ++++ G
Sbjct: 611 MKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGL 651
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 81/190 (42%), Gaps = 5/190 (2%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
L+ Q+ EL +E N+ T +I + ++ ++ A + L MK F D V V
Sbjct: 83 LFNQMQELG-----YEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVC 137
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ + K G + MA + F E+K G D +Y SM+ +A LD + +M+
Sbjct: 138 IDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQ 197
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
+ Y ++ GY G + A + E + G P ++ G++ KA
Sbjct: 198 VPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALR 257
Query: 332 AFQNMRKAGL 341
F+ M++ +
Sbjct: 258 IFEEMKRDAM 267
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 4/208 (1%)
Query: 161 LLEES----FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS 216
L EE+ E N Y+ +I G+GK ++ A + M ++G + T ++
Sbjct: 537 LFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLV 596
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
KA + A F+ +K L ++ +Y ++ + ++ V +EM Q + +
Sbjct: 597 KAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTI 656
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
Y A++ G + +GN A +FE + +G PD+ +I +A ++ AY F+
Sbjct: 657 TYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEET 716
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRA 364
R G K +L A K L +A
Sbjct: 717 RLKGCSIHTKTCVALLDALHKAECLEQA 744
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 72/174 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ YT +I + K + ++ M R G D + L + KAG + F
Sbjct: 374 NVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALF 433
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
EEIK G D RSY ++ + V+AG L M Q + + Y ++ G+ +
Sbjct: 434 EEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKS 493
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G A ++ E ++ G P +++ + +AY F+ + G+E
Sbjct: 494 GKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIE 547
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 100/238 (42%), Gaps = 2/238 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y II K ++ A AMK G + T+ +M+ KA L A F
Sbjct: 269 NLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIF 328
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG-EVLLREMDAQEVYVGSEVYKALLRGYSM 287
E + D ++ S++ + G +D + R +DA ++ VY +L+R +
Sbjct: 329 EGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQI-PNVVVYTSLIRNFFK 387
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
E ++++ + +G +PD + ++ AG+++K F+ ++ G P +
Sbjct: 388 CDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRS 447
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++++ + K E ++ G ++ A T+ F + G V + +L E
Sbjct: 448 YSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEE 505
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/233 (19%), Positives = 97/233 (41%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+ +I G GK+ ++ +A M I + V T ++ + K + + ++E+
Sbjct: 343 FCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMM 402
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D + + +AG ++G L E+ A+ + Y L+ G +
Sbjct: 403 RSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFAR 462
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
++ A++ G D R +I+ + +G+ KAY + M+ G P+ ++
Sbjct: 463 ETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVV 522
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
K ++L+ A + + +G + + +L F ++G V+E V+ E
Sbjct: 523 DGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEE 575
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 57/133 (42%)
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI 301
+Y +++ A G DR L +M V + L+R +S G + A + + +
Sbjct: 63 AYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEM 122
Query: 302 QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQL 361
+ D + + I+ + G+ A+ F M+ GL P D ++ K N+L
Sbjct: 123 KSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRL 182
Query: 362 NRALEFLIDLERD 374
+ A+E +E++
Sbjct: 183 DEAVEIFEQMEQN 195
>gi|302763321|ref|XP_002965082.1| hypothetical protein SELMODRAFT_83088 [Selaginella moellendorffii]
gi|300167315|gb|EFJ33920.1| hypothetical protein SELMODRAFT_83088 [Selaginella moellendorffii]
Length = 731
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 90/184 (48%), Gaps = 2/184 (1%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L EA++ Y+ +++ Y + + A+ TL ++K GF+ D + T M+ +YS G
Sbjct: 534 MLASGVEADVICYSALLNAYAEAGFAREAQQTLDSLKAAGFVPDTIVYTSMMKLYSNLGL 593
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ AE+ +EEI L D + +M+ Y+++GM E L R M + +
Sbjct: 594 IAEAEKIYEEISRLSP--DVFAANTMLNLYIKSGMFTEAEQLFRAMQRGKPGLNEVACTM 651
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+L+ Y G E V + + DAR ++I Y AG ++A A + MR+AG
Sbjct: 652 MLKLYREAGKIEQGLDVARVMSRRFLITDARAFNVVIAMYVKAGLMREALEALKEMRRAG 711
Query: 341 LEPS 344
L PS
Sbjct: 712 LVPS 715
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 110/240 (45%), Gaps = 8/240 (3%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y +I Y K +++ L M+ G DQVT ++ Y+ + AE
Sbjct: 299 DVATYNSLIEMYVKNDKLELVSGCLERMRDSGVSADQVTFRTLISAYAANNVVWKAEALV 358
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV--YKALLRGYS 286
+E++ G +D+ Y M+ YVRA + + E + R + ++ G EV Y ++ Y+
Sbjct: 359 QEMEGSGFLIDQAMYTVMIAMYVRARDVPKAESVFRFLHSRG---GLEVSTYVGVMDVYA 415
Query: 287 MNGNSEGAQRVFEAIQFAGI-TPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
+ + A+ VFE + AG+ TP + +++ AY + A T F+ M K G P++
Sbjct: 416 EHKCLDQAREVFELAKNAGLKTPS--LYNVMMKAYGACDRFTDAVTVFEAMEKDGASPNE 473
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ K L L+ ++ GF + ++ +++ +G V E E V +E
Sbjct: 474 ASFNSLIQLLCKGRLLEILQRVLVLVKAAGFKPSLASCSSVVSFYGDMGRVREAERVFKE 533
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 103/232 (44%), Gaps = 6/232 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F+ ++ + ++ YG +++ AE M G D + + ++ Y++AG + A+
Sbjct: 504 FKPSLASCSSVVSFYGDMGRVREAERVFKEMLASGVEADVICYSALLNAYAEAGFAREAQ 563
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA--LLR 283
+T + +K G D Y SM+ Y G++ E + E+ + +V+ A +L
Sbjct: 564 QTLDSLKAAGFVPDTIVYTSMMKLYSNLGLIAEAEKIYEEISR----LSPDVFAANTMLN 619
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
Y +G A+++F A+Q + C +++ Y+ AG+ ++ + M + L
Sbjct: 620 LYIKSGMFTEAEQLFRAMQRGKPGLNEVACTMMLKLYREAGKIEQGLDVARVMSRRFLIT 679
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGV 395
+ ++++ K + ALE L ++ R G + + +R G+
Sbjct: 680 DARAFNVVIAMYVKAGLMREALEALKEMRRAGLVPSRSTFSCFEEILERAGM 731
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 103/237 (43%), Gaps = 2/237 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N + +I K ++ + L+ +K GF + + +V Y G ++ AE F
Sbjct: 472 NEASFNSLIQLLCKGRLLEILQRVLVLVKAAGFKPSLASCSSVVSFYGDMGRVREAERVF 531
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+ G D Y +++ AY AG + L + A + VY ++++ YS
Sbjct: 532 KEMLASGVEADVICYSALLNAYAEAGFAREAQQTLDSLKAAGFVPDTIVYTSMMKLYSNL 591
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G A++++E I + ++PD ++N Y +G +A F+ M++ ++
Sbjct: 592 GLIAEAEKIYEEI--SRLSPDVFAANTMLNLYIKSGMFTEAEQLFRAMQRGKPGLNEVAC 649
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++L + ++ + L+ + R + A + A + + G++ E L+E
Sbjct: 650 TMMLKLYREAGKIEQGLDVARVMSRRFLITDARAFNVVIAMYVKAGLMREALEALKE 706
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 73/178 (41%), Gaps = 2/178 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y +I YG+ + M + G VT M+ +Y KAG + AE
Sbjct: 228 NPETYNTMISFYGEHAKFAEGSKVFAEMMKAGVELTTVTFNAMIHVYGKAGRTREAELLV 287
Query: 229 EEIKLLGEPL-DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
+K + D +Y S++ YV+ L+ L M V ++ L+ Y+
Sbjct: 288 TNMKQRKDCCPDVATYNSLIEMYVKNDKLELVSGCLERMRDSGVSADQVTFRTLISAYAA 347
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR-KAGLEPS 344
N A+ + + ++ +G D M ++I Y A KA + F+ + + GLE S
Sbjct: 348 NNVVWKAEALVQEMEGSGFLIDQAMYTVMIAMYVRARDVPKAESVFRFLHSRGGLEVS 405
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 94/232 (40%), Gaps = 2/232 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ YG + +A AM++ G ++ + ++ + K L++ + +K
Sbjct: 441 YNVMMKAYGACDRFTDAVTVFEAMEKDGASPNEASFNSLIQLLCKGRLLEILQRVLVLVK 500
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G S S+V Y G + E + +EM A V Y ALL Y+ G +
Sbjct: 501 AAGFKPSLASCSSVVSFYGDMGRVREAERVFKEMLASGVEADVICYSALLNAYAEAGFAR 560
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
AQ+ ++++ AG PD + ++ Y G +A ++ + + L P +L
Sbjct: 561 EAQQTLDSLKAAGFVPDTIVYTSMMKLYSNLGLIAEAEKIYEEISR--LSPDVFAANTML 618
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
+ K A + ++R + + A + ++ G +E+ V R
Sbjct: 619 NLYIKSGMFTEAEQLFRAMQRGKPGLNEVACTMMLKLYREAGKIEQGLDVAR 670
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 99/252 (39%), Gaps = 8/252 (3%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L E I Y+ ++ +G+ A M G D+V ++ + + + G+
Sbjct: 143 MLGERVPPTIFTYSILVDVHGRAGMKDEAIRFYRHMIESGVEPDEVMVSTYMNLQRRFGD 202
Query: 221 LKMAEET----FEEIKLLG---EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYV 273
L+ AE+ F E + G P + +Y +M+ Y G + EM V +
Sbjct: 203 LEEAEKAFWGLFSENLVDGTTKRPENPETYNTMISFYGEHAKFAEGSKVFAEMMKAGVEL 262
Query: 274 GSEVYKALLRGYSMNGNSEGAQRVFEAI-QFAGITPDARMCALLINAYQMAGQSQKAYTA 332
+ + A++ Y G + A+ + + Q PD LI Y + +
Sbjct: 263 TTVTFNAMIHVYGKAGRTREAELLVTNMKQRKDCCPDVATYNSLIEMYVKNDKLELVSGC 322
Query: 333 FQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKR 392
+ MR +G+ ++SA N + +A + ++E GF++ + + A + R
Sbjct: 323 LERMRDSGVSADQVTFRTLISAYAANNVVWKAEALVQEMEGSGFLIDQAMYTVMIAMYVR 382
Query: 393 LGVVEEVEHVLR 404
V + E V R
Sbjct: 383 ARDVPKAESVFR 394
>gi|224138172|ref|XP_002326536.1| predicted protein [Populus trichocarpa]
gi|222833858|gb|EEE72335.1| predicted protein [Populus trichocarpa]
Length = 697
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 5/188 (2%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQN---AENTLLAMKRRGFICDQVTLTVMVVMYS 216
+ +++ ++ YT I+ GY K Q +N A M + G D VTLTV+V M+S
Sbjct: 495 VMFKDNIFPSVIHYTTIMDGYAK--QFKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFS 552
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
K G + A F+E+ G D+ ++ +++ Y R G + R + ++M V +
Sbjct: 553 KRGKMSKALNLFKEMAEEGLSRDEFAFTAIIDGYCRVGNVKRAWSMYKKMKRNNVTPNVK 612
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
Y L+ G+ + A + + ++ +TPD + LI YQ +AY F M
Sbjct: 613 TYTCLVDGFCKLKRLDMATMLIDDMKRNSVTPDVKTYTALIAGYQRIENIDRAYEVFDEM 672
Query: 337 RKAGLEPS 344
+K G P
Sbjct: 673 KKKGTLPD 680
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 95/225 (42%), Gaps = 8/225 (3%)
Query: 196 MKRRGFICDQVTLTVMVVMYSK---AGNLKMAEETF--EEIKLLGEPLDKRSYGSMVMAY 250
+K G + T T+M+ Y K N+ M + + EE++ GE +YG +
Sbjct: 176 LKNSGPSPNVYTYTIMINFYCKERHGQNIDMEQASLILEEMEEKGENPTVVTYGVYIHGL 235
Query: 251 VRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDA 310
R G ++ ++++ + + Y AL++G+ G + A ++ E ++ GI+PD
Sbjct: 236 CRVGSIEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQKGRPDEALKLLEEMKDEGISPDI 295
Query: 311 RMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLID 370
++L+NA+ G + Q M +P C +L + +N L F +
Sbjct: 296 YSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSVLMGLRTKGLVNDCLNFFHE 355
Query: 371 LERDGFMVGKEASCTLAAWFKRLGVVEEVE---HVLREYGLRETY 412
L G+ + TL F + V+ H +R+ GL Y
Sbjct: 356 LSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDY 400
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 94/236 (39%), Gaps = 2/236 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
NI Y +I G+ +K + A L MK G D + +++V + G+++
Sbjct: 259 NIYCYNALIQGFCQKGRPDEALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLI 318
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E++ + S++M G+++ E+ A+ Y L+ G+
Sbjct: 319 QEMEHCNKKPPLVCCTSVLMGLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKG 378
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS-DKC 347
N + A + ++ G+ PD + LI Y G ++A F M + GL+P C
Sbjct: 379 HNVKSANNLVHEMRKNGLVPDYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITC 438
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
++ C + Q AL ++ ++ + + W + VE+ VL
Sbjct: 439 NHIVDQYCSR-GQFEEALIYINQMKDQNILPNSYTYSVIINWLCKYQAVEKAWEVL 493
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/215 (19%), Positives = 90/215 (41%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+E +I Y+ +++ + + I++ N + M+ V T +++ G +
Sbjct: 288 DEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSVLMGLRTKGLVN 347
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
F E+ G D SY +++ +++ + L+ EM + +Y +L+
Sbjct: 348 DCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLI 407
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
R Y G + A + F + G+ PD C +++ Y GQ ++A M+ +
Sbjct: 408 REYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQNIL 467
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
P+ ++I++ K + +A E L + +D
Sbjct: 468 PNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIF 502
>gi|226505250|ref|NP_001147833.1| GTP binding protein [Zea mays]
gi|195614010|gb|ACG28835.1| GTP binding protein [Zea mays]
gi|413952711|gb|AFW85360.1| GTP binding protein [Zea mays]
Length = 547
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 103/215 (47%), Gaps = 2/215 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+E F + +I GK Q + + + M+ RG + + T ++V Y++A +K
Sbjct: 154 QEGFSYTAEGFHNLIEALGKIKQFRLVWSLVETMRCRGLL-SKDTFKLIVRRYARARKVK 212
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS-EVYKAL 281
A ETFE++ + G + Y ++ ++ + + + + +EM + +V + Y L
Sbjct: 213 EAVETFEKMSIFGLKTELSDYNWLIDTLSKSKQVKKAQAIYKEMKRKGKFVPDLKTYTVL 272
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+ G+ + + +++ + AGI PD +LI+A+ +G+ +A F M +G
Sbjct: 273 MEGWGHEKDLLMVKTMYQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGC 332
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
PS ++++ E +L+ AL++ ++ GF
Sbjct: 333 MPSPHVYCMLINGLGSEERLDEALKYFEHYKKSGF 367
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 1/212 (0%)
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRG-FICDQVTLTVMVVMYSKAGNLKM 223
+ + DY +I K Q++ A+ MKR+G F+ D T TV++ + +L M
Sbjct: 225 GLKTELSDYNWLIDTLSKSKQVKKAQAIYKEMKRKGKFVPDLKTYTVLMEGWGHEKDLLM 284
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
+ ++E+ G D +YG ++ A+ ++G D + EM+A VY L+
Sbjct: 285 VKTMYQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYCMLIN 344
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G + A + FE + +G + C ++ AY A + Q A+ MRK + P
Sbjct: 345 GLGSEERLDEALKYFEHYKKSGFPMEVPTCNAVVGAYCRASKFQHAFKMVDEMRKCKVGP 404
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDG 375
+ + +IL K + A + DG
Sbjct: 405 NSRTYDVILHYLIKSQKFEEAYNIFQRMGIDG 436
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/200 (19%), Positives = 85/200 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+G G + ++ A K+ GF + T +V Y +A + A + +E++
Sbjct: 339 YCMLINGLGSEERLDEALKYFEHYKKSGFPMEVPTCNAVVGAYCRASKFQHAFKMVDEMR 398
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ R+Y ++ +++ + + + M Y ++ + NG +
Sbjct: 399 KCKVGPNSRTYDVILHYLIKSQKFEEAYNIFQRMGIDGCEPQLNTYTMMVGMFCSNGRVD 458
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +V++ + G+ P M + LIN + ++A FQ M G+ P + + +
Sbjct: 459 MALKVWKQMGEKGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLK 518
Query: 353 SACEKENQLNRALEFLIDLE 372
A + +++ A E + L+
Sbjct: 519 EALVQGGRISLAQEVALKLD 538
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 43/220 (19%), Positives = 85/220 (38%), Gaps = 4/220 (1%)
Query: 160 ALLEESFEANIRD----YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
+ +E +A IR Y +I + K + A M+ G + +++
Sbjct: 287 TMYQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYCMLINGL 346
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
L A + FE K G P++ + ++V AY RA ++ EM +V S
Sbjct: 347 GSEERLDEALKYFEHYKKSGFPMEVPTCNAVVGAYCRASKFQHAFKMVDEMRKCKVGPNS 406
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
Y +L + E A +F+ + G P +++ + G+ A ++
Sbjct: 407 RTYDVILHYLIKSQKFEEAYNIFQRMGIDGCEPQLNTYTMMVGMFCSNGRVDMALKVWKQ 466
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
M + G+ P + +++ EN+L A + ++ G
Sbjct: 467 MGEKGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKG 506
>gi|414591641|tpg|DAA42212.1| TPA: hypothetical protein ZEAMMB73_141452 [Zea mays]
Length = 472
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 100/217 (46%), Gaps = 16/217 (7%)
Query: 130 FMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNA 189
F + +R D + L ++ H + EL + + F NI K + GK Q A
Sbjct: 122 FCEAKRTD-----EALDILLH----RTPELGCVPDVFSYNI--LLKSLCNQGKSGQ---A 167
Query: 190 ENTLLAMKRRGFIC--DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMV 247
+N L M G +C D V ++ + K G++ A + F+E+ G P D +Y S+V
Sbjct: 168 DNLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVV 227
Query: 248 MAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGIT 307
A +A +D+ E LR+M + V + Y L+ GYS G + A RVF+ ++ I
Sbjct: 228 HALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSIL 287
Query: 308 PDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
PD ++L+ + G+ ++A F M G P
Sbjct: 288 PDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPD 324
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 8/176 (4%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+GY Q + A M+R + D VTL++++ K G +K A + F+ +
Sbjct: 258 YNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMA 317
Query: 233 LLGEPLDKRSYGSMVMAYVRAG----MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ G+ D SY M+ Y G M D +++L + A + Y + ++ Y+
Sbjct: 318 MKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFY----TFNVQIKAYANC 373
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
G + A +F ++ G+ PD +I A G+ A F M G+ P
Sbjct: 374 GMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPD 429
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 117/261 (44%), Gaps = 7/261 (2%)
Query: 156 VAELALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
V+ L LL E FE N+ YT +I+G+ K+ +++ A + +M +G + V +
Sbjct: 394 VSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCL 453
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ K GN++ A + F E+ G D ++ S++ + ++ L +M + V
Sbjct: 454 ICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGV 513
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
+ Y L+ + M + + A ++ + + F G D LI A G +K
Sbjct: 514 IANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLG 573
Query: 332 AFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFK 391
F+ M G+ P+ +++S + ++N AL+FL D+ G +L
Sbjct: 574 LFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLC 633
Query: 392 RLGVVEEVEHV---LREYGLR 409
++G V+E ++ L+ G+R
Sbjct: 634 KMGHVQEASNLFNKLQSEGIR 654
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 87/209 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I + +I+G K +++ A + M G I + VT +V + +++ A +
Sbjct: 481 DIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLV 540
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+ G PLD +Y ++ A + G +++G L EM + ++ L+ G
Sbjct: 541 DEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRT 600
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G A + + + G+TPD LIN G Q+A F ++ G+ P
Sbjct: 601 GKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITY 660
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFM 377
++S E N A L GF+
Sbjct: 661 NTLISRHCHEGMFNDACLLLYKGVDSGFI 689
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 101/268 (37%), Gaps = 36/268 (13%)
Query: 159 LALLEESF----EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMV-- 212
L LLE+ F E +++ + +IHG + +I A L M RGF D +T ++
Sbjct: 260 LQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHG 319
Query: 213 ----------------------VMYSKAGNLKMAEETFEEIKLL--------GEPLDKRS 242
V+Y+ + +A FEE K L G D +
Sbjct: 320 LCRMGQVDEARALLNKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYT 379
Query: 243 YGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQ 302
+ M+ V+ G L LL EM A+ Y L+ G+ G E A + ++
Sbjct: 380 FNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMS 439
Query: 303 FAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLN 362
G++ + LI A G ++A F M G +P +++ K +++
Sbjct: 440 AKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKME 499
Query: 363 RALEFLIDLERDGFMVGKEASCTLAAWF 390
AL D+ +G + TL F
Sbjct: 500 EALSLYHDMFLEGVIANTVTYNTLVHAF 527
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 90/234 (38%), Gaps = 5/234 (2%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +IH + ++ A L M D T ++ +AG + A + + +
Sbjct: 243 YQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRML 302
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
L G D +YG ++ R G +D LL ++ + +Y L+ GY +G E
Sbjct: 303 LRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNPN----TVLYNTLISGYVASGRFE 358
Query: 293 GAQRV-FEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALI 351
A+ + + + AG PDA ++I+ G A M EP+ ++
Sbjct: 359 EAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTIL 418
Query: 352 LSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ K+ +L A E + + G + L + G +EE + E
Sbjct: 419 INGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGE 472
>gi|414591141|tpg|DAA41712.1| TPA: hypothetical protein ZEAMMB73_063178 [Zea mays]
Length = 374
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 94/201 (46%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
A+ + E +I Y + G + ++ A+ L M G + + VT T ++ ++ K G
Sbjct: 168 AMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDG 227
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A F E+ G +Y M+ Y + G + E +EM+ + Y
Sbjct: 228 DMVEARRLFREMAEKGATPSVVTYNVMIHGYAKKGSIREAERFRKEMEKKGFVPDVYTYA 287
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
+L+ G+ +NG + A ++FE ++ G P+ LI+ G+S+ A+ + +M KA
Sbjct: 288 SLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKA 347
Query: 340 GLEPSDKCVALILSACEKENQ 360
GL P D + ++ + +N+
Sbjct: 348 GLIPDDSLYSALVGSLHTDNR 368
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 99/248 (39%), Gaps = 35/248 (14%)
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA 224
E N R Y +I+G+ K Q++ AE L M+ +G +Q+ M+ Y + G + A
Sbjct: 103 GVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDA 162
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL--------------------- 263
+ ++ +G LD +Y ++ R LD + LL
Sbjct: 163 LKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISI 222
Query: 264 --------------REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPD 309
REM + Y ++ GY+ G+ A+R + ++ G PD
Sbjct: 223 HCKDGDMVEARRLFREMAEKGATPSVVTYNVMIHGYAKKGSIREAERFRKEMEKKGFVPD 282
Query: 310 ARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLI 369
A L++ + + G+ A F+ M++ G EP+ ++S KE + A +
Sbjct: 283 VYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYD 342
Query: 370 DLERDGFM 377
D+ + G +
Sbjct: 343 DMLKAGLI 350
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 88/209 (42%), Gaps = 18/209 (8%)
Query: 209 TVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
+V+V K+G + A +++ G L+ Y S++ YVR R + +L M+
Sbjct: 18 SVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMEN 77
Query: 269 Q--EVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
+ E VG +G G +V + G+ P+ R +LIN + GQ
Sbjct: 78 EGIEATVG-------------DGTCGGPPKVLDECVGNGVEPNERTYGVLINGFCKIGQM 124
Query: 327 QKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
+ A +M+ G+ + ++ ++ ++ AL+ +E+ G + TL
Sbjct: 125 EAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTL 184
Query: 387 AAWFKRLGVVEEVE---HVLREYGLRETY 412
A R+ ++E + H++ E G+ Y
Sbjct: 185 ACGLCRVNRLDEAKTLLHIMIEMGVVPNY 213
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 90/178 (50%), Gaps = 2/178 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y+ +I+GY K ++++ M +RG + + VT TV++ Y +AG L +AEE F
Sbjct: 325 DVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIF 384
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ + G P + +Y ++ G +++ V+L +M + Y ++RG
Sbjct: 385 KWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKA 444
Query: 289 GNSEGAQRVFEAIQFAGITPDA-RMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
G A ++ ++ G+TPD A+++ Y+ G +A F+ M++ G+ P++
Sbjct: 445 GEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYK-KGLRGEADALFRKMKEDGILPNE 501
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 81/184 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ S + +I Y+ +I+G ++ AE M +G D VT ++++ Y K+
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKK 341
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ + F E+ G + +Y ++ Y RAG L+ E + + M V Y
Sbjct: 342 VEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNV 401
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL G NG E A + +Q +G+ D ++I AG+ A+ + ++ G
Sbjct: 402 LLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKG 461
Query: 341 LEPS 344
L P
Sbjct: 462 LTPD 465
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 94/211 (44%), Gaps = 6/211 (2%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMV---VMYSKAGNLKMAE 225
++ + +I K+ +I AE M RR D VT ++++ MYS+ L AE
Sbjct: 255 DVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSR---LDEAE 311
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+ F + G D +Y ++ Y ++ ++ G L EM + V + Y L++GY
Sbjct: 312 QMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGY 371
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
G A+ +F+ + F G+ P+ +L++ G+ +KA +M+K+G++
Sbjct: 372 CRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADI 431
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGF 376
+I+ K ++ A + L G
Sbjct: 432 VTYNIIIRGMCKAGEVADAWDLYCSLNLKGL 462
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 81/203 (39%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G + +A + M +R D T ++ K G + AEE +EE+
Sbjct: 224 YNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMI 283
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
D +Y ++ LD E + M ++ + Y L+ GY + E
Sbjct: 284 RRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVE 343
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
++F + G+ + +LI Y AG+ A F+ M G+ P+ ++L
Sbjct: 344 HGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLL 403
Query: 353 SACEKENQLNRALEFLIDLERDG 375
++ +AL L D+++ G
Sbjct: 404 HGLCDNGKIEKALVILADMQKSG 426
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 53/307 (17%), Positives = 120/307 (39%), Gaps = 17/307 (5%)
Query: 115 PETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPL---------YLQVAELAL---- 161
P + S LL+A + K +L Q+ + H L + + ++L+L
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 162 ----LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSK 217
++ E +I + +++G+ + +I +A M G+ + V ++ K
Sbjct: 139 LGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCK 198
Query: 218 AGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
+ + A + +++ G D +Y S++ +G D ++ M +E+Y
Sbjct: 199 SKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFT 258
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
+ AL+ G A+ ++E + + PD +LLI M + +A F M
Sbjct: 259 FNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMV 318
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
G P +++++ K ++ ++ ++ + G + L + R G +
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLN 378
Query: 398 EVEHVLR 404
E + +
Sbjct: 379 VAEEIFK 385
>gi|242092396|ref|XP_002436688.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
gi|241914911|gb|EER88055.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
Length = 551
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 103/215 (47%), Gaps = 2/215 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+E F + +I GK Q + + + M+ RG + + T ++V Y++A +K
Sbjct: 158 QEGFSYTAEGFHNLIEALGKIKQFKLVWSLVETMRCRGLL-SKDTFKLIVRRYARARKVK 216
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS-EVYKAL 281
A ETFE++ + G + Y ++ ++ + + + + +EM + +V + Y L
Sbjct: 217 EAVETFEKMSIFGLKTELSDYNWLIDTLSKSKQVKKAQAIYKEMKRKGKFVPDLKTYTVL 276
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+ G+ + + +++ + AGI PD +LI+A+ +G+ +A F M +G
Sbjct: 277 MEGWGHEKDLLMVKTMYQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGC 336
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
PS ++++ E +L+ AL++ ++ GF
Sbjct: 337 MPSPHVYCMLINGLGSEERLDEALKYFEQYKKSGF 371
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 103/245 (42%), Gaps = 1/245 (0%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRG-FICDQVTLTVMVVMYSKAGNLKMA 224
+ + DY +I K Q++ A+ MKR+G F+ D T TV++ + +L M
Sbjct: 230 LKTELSDYNWLIDTLSKSKQVKKAQAIYKEMKRKGKFVPDLKTYTVLMEGWGHEKDLLMV 289
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
+ ++E+ G D +YG ++ A+ ++G D + EM+A VY L+ G
Sbjct: 290 KTMYQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYCMLING 349
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
+ A + FE + +G + C ++ AY A + + A+ MR+ + P+
Sbjct: 350 LGSEERLDEALKYFEQYKKSGFPMEVPTCNAVVGAYCRASKFEHAFKMVDEMRECKIGPN 409
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
+ +IL K + A + DG + F G V+ +V +
Sbjct: 410 SRTYDVILHYLIKSQKFEEAYNVFQRMGMDGCEPQLNTYTMMVGMFCSNGRVDMALNVWK 469
Query: 405 EYGLR 409
+ G R
Sbjct: 470 QMGER 474
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/220 (19%), Positives = 87/220 (39%), Gaps = 4/220 (1%)
Query: 160 ALLEESFEANIRD----YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
+ +E +A IR Y +I + K + A M+ G + +++
Sbjct: 291 TMYQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYCMLINGL 350
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
L A + FE+ K G P++ + ++V AY RA + ++ EM ++ S
Sbjct: 351 GSEERLDEALKYFEQYKKSGFPMEVPTCNAVVGAYCRASKFEHAFKMVDEMRECKIGPNS 410
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
Y +L + E A VF+ + G P +++ + G+ A ++
Sbjct: 411 RTYDVILHYLIKSQKFEEAYNVFQRMGMDGCEPQLNTYTMMVGMFCSNGRVDMALNVWKQ 470
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
M + G+ P + +++ EN+L A + ++ G
Sbjct: 471 MGERGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKG 510
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 34/171 (19%), Positives = 71/171 (41%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+G G + ++ A K+ GF + T +V Y +A + A + +E++
Sbjct: 343 YCMLINGLGSEERLDEALKYFEQYKKSGFPMEVPTCNAVVGAYCRASKFEHAFKMVDEMR 402
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ R+Y ++ +++ + + + M Y ++ + NG +
Sbjct: 403 ECKIGPNSRTYDVILHYLIKSQKFEEAYNVFQRMGMDGCEPQLNTYTMMVGMFCSNGRVD 462
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
A V++ + G+ P M + LIN + ++A FQ M G+ P
Sbjct: 463 MALNVWKQMGERGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRP 513
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 102/243 (41%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E F + Y +I+GY K + A T+ M R+ D VTL ++ + L+
Sbjct: 411 ESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLE 470
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A + + G +D+ SYG++++ Y + G +DR L EM +E+ + Y ++
Sbjct: 471 EAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCII 530
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G G +E A + +G+ PD +++ Y G +KA+ M + +
Sbjct: 531 GGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFK 590
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P ++L E L +AL+ G + TL + G +++ ++
Sbjct: 591 PDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNL 650
Query: 403 LRE 405
L E
Sbjct: 651 LSE 653
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 103/263 (39%), Gaps = 41/263 (15%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA-------- 224
Y I+ KK ++ +A + L+ MK RG + ++ T ++V Y K G LK A
Sbjct: 246 YNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMT 305
Query: 225 ------------------------EETF------EEIKLLGEPLDKRSYGSMVMAYVRAG 254
EE F E +KLL D SY +++ +
Sbjct: 306 QNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLP---DVVSYNTLINGCLEWS 362
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
+ LL EM + V + + +++ Y G + A ++ +G +PD
Sbjct: 363 KISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYN 422
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
LIN Y AG +A+ M + ++ + IL +E +L A + L +
Sbjct: 423 TLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKR 482
Query: 375 GFMVGKEASCTLAAWFKRLGVVE 397
G+ + + + TL + + G V+
Sbjct: 483 GYFIDEVSYGTLIVGYFKDGNVD 505
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/315 (20%), Positives = 123/315 (39%), Gaps = 20/315 (6%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRA-DWLAVLKQLKLMEHPL-----------YLQVAELA 160
SP L + A+V+ +P A +K+L+L + L Y ++
Sbjct: 131 TSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVS 190
Query: 161 LLEESFE--------ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMV 212
E+F N+ + +I+GY + + ++A L M + D VT ++
Sbjct: 191 FSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTIL 250
Query: 213 VMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY 272
K G L A + ++K G ++ +Y +V Y + G L ++ M +
Sbjct: 251 DALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLL 310
Query: 273 VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTA 332
Y L+ G G E A ++ + ++ + PD LIN + +A+
Sbjct: 311 PDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKL 370
Query: 333 FQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKR 392
+ M + G++P+ +++ KE +++ A + +E GF TL + +
Sbjct: 371 LEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCK 430
Query: 393 LGVVEEVEHVLREYG 407
G + E + E G
Sbjct: 431 AGNMGEAFRTMDEMG 445
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 95/243 (39%), Gaps = 35/243 (14%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y +I+G + +I A L M +G + VT +MV Y K G + A T
Sbjct: 347 DVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTI 406
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG-----------------------EVLLRE 265
+++ G D +Y +++ Y +AG + L RE
Sbjct: 407 TKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCRE 466
Query: 266 MDAQEVY------------VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
+E Y + Y L+ GY +GN + A ++++ ++ I P
Sbjct: 467 KKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTY 526
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
+I G++++A + + ++GL P + IL +E + +A +F +
Sbjct: 527 NCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVE 586
Query: 374 DGF 376
+ F
Sbjct: 587 NSF 589
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 75/205 (36%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I GY K + A MK + I VT ++ + G + A E+
Sbjct: 491 YGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELL 550
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D+ +Y +++ Y R G +++ +M LLRG M G E
Sbjct: 551 ESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLE 610
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A ++F G D LI + G+ A+ M + L P I+
Sbjct: 611 KALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAII 670
Query: 353 SACEKENQLNRALEFLIDLERDGFM 377
+A ++ A EF+ + G +
Sbjct: 671 TALTDSGRIREAEEFMSKMLEKGXL 695
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 62/148 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
LLE + Y I+HGY ++ ++ A M F D T +++ G
Sbjct: 549 LLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGM 608
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ A + F G+ +D +Y +++ + + G LD LL EM+ +E+ Y A
Sbjct: 609 LEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNA 668
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITP 308
++ + +G A+ + G P
Sbjct: 669 IITALTDSGRIREAEEFMSKMLEKGXLP 696
>gi|357162065|ref|XP_003579293.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Brachypodium distachyon]
Length = 858
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 106/245 (43%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I Y I K I+ A LL M+ + + VT + ++ YSK A + +
Sbjct: 338 DIYTYNTFIDAICKCGNIELAMQVLLDMEAKNVKPNVVTYSTLIDGYSKLEKYDEALKLY 397
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++K LG LD+ Y +++ YV+AG ++ EM+ + + Y +L+ GY
Sbjct: 398 EKMKSLGIQLDRVCYNTVLAIYVKAGKYGEIAIVCDEMEDSGIEKDTVTYNSLINGYGKQ 457
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + + + ++ G+ P + LI+ Y AG A+ + + +++GL+P
Sbjct: 458 GRLDIVSFLVQDMRRRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLF 517
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGL 408
+ + K + AL L D+ G T+ F + V+ E + E G+
Sbjct: 518 SSFIDTLAKNGLVEWALSLLNDMTEMGIKPNVVTYNTIIDAFGKSKVLSEEDPEAGEMGI 577
Query: 409 RETYS 413
Y+
Sbjct: 578 VGVYN 582
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 87/199 (43%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ + N+ Y+ +I GY K + A MK G D+V ++ +Y KAG
Sbjct: 368 KNVKPNVVTYSTLIDGYSKLEKYDEALKLYEKMKSLGIQLDRVCYNTVLAIYVKAGKYGE 427
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
+E++ G D +Y S++ Y + G LD L+++M + V Y L+
Sbjct: 428 IAIVCDEMEDSGIEKDTVTYNSLINGYGKQGRLDIVSFLVQDMRRRGVAPSVLTYSTLID 487
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
YS G A V+ + +G+ PD + + I+ G + A + +M + G++P
Sbjct: 488 IYSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGLVEWALSLLNDMTEMGIKP 547
Query: 344 SDKCVALILSACEKENQLN 362
+ I+ A K L+
Sbjct: 548 NVVTYNTIIDAFGKSKVLS 566
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 109/243 (44%), Gaps = 8/243 (3%)
Query: 173 YTKIIHGYGKK-MQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEI 231
Y +I GK + ++ M R D+ T ++ S+AG+L+ A F+E+
Sbjct: 271 YNAVIDACGKGGVDLRFTLGYFRQMLRDRLCPDRKTFNSLLSACSRAGHLEDARALFDEM 330
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
LG D +Y + + A + G ++ +L +M+A+ V Y L+ GYS
Sbjct: 331 IHLGIGRDIYTYNTFIDAICKCGNIELAMQVLLDMEAKNVKPNVVTYSTLIDGYSKLEKY 390
Query: 292 EGAQRVFEAIQFAGITPDARMC-ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
+ A +++E ++ GI D R+C ++ Y AG+ + M +G+E
Sbjct: 391 DEALKLYEKMKSLGIQLD-RVCYNTVLAIYVKAGKYGEIAIVCDEMEDSGIEKDTVTYNS 449
Query: 351 ILSACEKENQLNRALEFLI-DLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV---LREY 406
+++ K+ +L+ + FL+ D+ R G TL + + G+ + +V +E
Sbjct: 450 LINGYGKQGRLD-IVSFLVQDMRRRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKES 508
Query: 407 GLR 409
GL+
Sbjct: 509 GLK 511
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 88/227 (38%), Gaps = 10/227 (4%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+ E + Y +I+GYGK+ ++ + M+RRG +T + ++ +YSKAG
Sbjct: 437 DSGIEKDTVTYNSLINGYGKQGRLDIVSFLVQDMRRRGVAPSVLTYSTLIDIYSKAGMHG 496
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A + + K G D + S + + G+++ LL +M + Y ++
Sbjct: 497 DAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGLVEWALSLLNDMTEMGIKPNVVTYNTII 556
Query: 283 RGYSMN---------GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAF 333
+ + G V+ P R + + + + + F
Sbjct: 557 DAFGKSKVLSEEDPEAGEMGIVGVYNGQIIRAANPVTRGRSAIDVRMRRSQELYFILELF 616
Query: 334 QNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER-DGFMVG 379
Q M + G+ P+ + IL+AC + N A L L D F+ G
Sbjct: 617 QKMVQQGVRPNVVTFSAILNACSRCNNFEDAALLLEQLRLFDNFVYG 663
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%)
Query: 170 IRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFE 229
I Y ++ G ++ +++ A+ + M G D VT T++V K G+L MA+E F+
Sbjct: 409 IVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFD 468
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
E+ G LD +Y + ++ ++ G R L EM A+ +Y ++ G G
Sbjct: 469 EMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLG 528
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
N E A + + + G+ PD +I+A+ G+ +K F M GL PS
Sbjct: 529 NLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYT 588
Query: 350 LILSACEKENQLNRALEFLIDLERDGFM 377
+++ + +L RA + +++ G +
Sbjct: 589 VLIHGHAGKGRLERAFIYFSEMQEKGIL 616
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 106/252 (42%), Gaps = 7/252 (2%)
Query: 155 QVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
Q ++ ++ E +I YT +++G K + A+ M G D +V
Sbjct: 429 QQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVG 488
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
K G+ A EE+ G P D Y +V + G L+ LL++M + V
Sbjct: 489 ELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPD 548
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
Y +++ + NG + +F + G+TP +LI+ + G+ ++A+ F
Sbjct: 549 YVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFS 608
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEA-------SCTLA 387
M++ G+ P+ +++ K ++++A F ++ G K + +C +
Sbjct: 609 EMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMG 668
Query: 388 AWFKRLGVVEEV 399
W + L + +++
Sbjct: 669 NWQEALSLYKQM 680
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 83/214 (38%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E + I Y ++ Y K ++Q + L M+RRG + VT V++ SK G +
Sbjct: 227 EFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFE 286
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A+ E+ G + +Y ++ Y GML L EM + Y + +
Sbjct: 287 QAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFI 346
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G G A + + + PD LI Y G KA+ F +R L
Sbjct: 347 YGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLF 406
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
P+ +L ++ +L A + +++ +G
Sbjct: 407 PTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGI 440
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 92/245 (37%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L+ + + Y +I+GY K + A + M +G T + K G
Sbjct: 295 MLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGR 354
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + ++ D SY +++ Y R G L + +L E+ + ++ Y
Sbjct: 355 MSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNT 414
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL G G E AQ++ + GI PD +L+N G A F M G
Sbjct: 415 LLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEG 474
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
LE A + K +RA ++ GF + +LG +EE
Sbjct: 475 LELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEAS 534
Query: 401 HVLRE 405
+L++
Sbjct: 535 ELLQK 539
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 85/222 (38%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+G KK + + A+ + M + G T ++ Y G L A EE+
Sbjct: 272 YNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMV 331
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
L G +Y S + + G + L +M A + Y L+ GY GN
Sbjct: 332 LKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLM 391
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +F+ ++ + P L++ G+ + A M G+ P +++
Sbjct: 392 KAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILV 451
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
+ K L+ A EF ++ +G + A T +LG
Sbjct: 452 NGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLG 493
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 61/138 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT IIH + + +++ M +G VT TV++ ++ G L+ A F E++
Sbjct: 552 YTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQ 611
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +Y S++ + +D+ EM + ++ Y L+ GN +
Sbjct: 612 EKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQ 671
Query: 293 GAQRVFEAIQFAGITPDA 310
A +++ + G+ PD+
Sbjct: 672 EALSLYKQMLDRGVQPDS 689
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 98/228 (42%), Gaps = 11/228 (4%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+LE N+ Y+ +I+ Y K+ + AE M RG I + +T M+ + K
Sbjct: 310 MLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNR 369
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L AE F + G D ++ +++ Y A +D G LL EM + + Y
Sbjct: 370 LDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNT 429
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA- 339
L+ G+ + G+ A + + + +G+ PD C L++ G+ + A F+ M+K+
Sbjct: 430 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 489
Query: 340 ----------GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
G+EP + +++S E + A E ++ G +
Sbjct: 490 MDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIV 537
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E +++ Y +I G + + AE M RG + + +T + M+ K L A +
Sbjct: 502 EPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQ 561
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
F+ + D ++ ++V Y +AG +D G L EM + + + Y L+ G+
Sbjct: 562 MFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFR 621
Query: 287 MNGNSEGAQRVFEAIQFAGITPDA 310
GN GA +F+ + +G+ PD
Sbjct: 622 KVGNINGALDIFQEMISSGVYPDT 645
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/283 (19%), Positives = 106/283 (37%), Gaps = 46/283 (16%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y +I G+ K+ ++ AE+ M +G D T ++ Y A + E
Sbjct: 353 NTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELL 412
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E+ G D +Y +++ + G L+ L ++M + V LL G N
Sbjct: 413 HEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDN 472
Query: 289 GNSEGAQRVFEAIQ-----------FAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
G + A +F+A+Q F G+ PD + +LI+ G+ +A ++ M
Sbjct: 473 GKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMP 532
Query: 338 KAGLEPSDKCVALILSACEKENQLNRA--------------------------------- 364
G+ P+ + +++ K+++L+ A
Sbjct: 533 HRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVD 592
Query: 365 --LEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
LE ++ R G + TL F+++G + + +E
Sbjct: 593 DGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQE 635
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 69/169 (40%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D T +++ G AEE ++E+ G + +Y SM+ + LD +
Sbjct: 504 DVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMF 563
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
M ++ + L+ GY G + +F + GI DA LI+ ++
Sbjct: 564 DSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKV 623
Query: 324 GQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLE 372
G A FQ M +G+ P + +L+ + +L RA+ L DL+
Sbjct: 624 GNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDLQ 672
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/226 (19%), Positives = 85/226 (37%), Gaps = 11/226 (4%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+ E A+ Y +IHG+ + A + M G D VT ++ G
Sbjct: 415 MTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGK 474
Query: 221 LKMAEETFEEIK-----------LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQ 269
LK A E F+ ++ G D ++Y ++ + G E L +EM +
Sbjct: 475 LKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHR 534
Query: 270 EVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
+ + Y +++ G + A ++F+++ +PD L++ Y AG+
Sbjct: 535 GIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDG 594
Query: 330 YTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
F M + G+ ++ K +N AL+ ++ G
Sbjct: 595 LELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSG 640
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 45/239 (18%), Positives = 102/239 (42%), Gaps = 5/239 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F+ ++ ++ ++HG + ++ A + M R + VT T ++ + G + A
Sbjct: 143 FQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCRP----NVVTFTTLMNGLCREGRVVEAV 198
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMD-AQEVYVGSEVYKALLRG 284
+ + G ++ +YG++V + G LLR+M+ + +Y A++ G
Sbjct: 199 ALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDG 258
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
+G A ++ +Q GI PD +I+ + +G+ +A Q M + + P+
Sbjct: 259 LWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPN 318
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+ +++A KE + A E ++ G + ++ F + ++ EH+
Sbjct: 319 VVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMF 377
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 54/114 (47%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ +I+G K+ ++ A +M + F D VT +V Y KAG + E F
Sbjct: 539 NTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELF 598
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
E+ G D +Y +++ + + G ++ + +EM + VY + +++L
Sbjct: 599 CEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSML 652
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 47/103 (45%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+SF ++ + ++ GY K ++ + M RRG + D +T ++ + K GN+
Sbjct: 569 KSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNING 628
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
A + F+E+ G D + SM+ L R +L ++
Sbjct: 629 ALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDL 671
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 89/235 (37%), Gaps = 1/235 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTL-TVMVVMYSKAG 219
++E+ + N Y I+ G K +A N L M+ I V + + ++ K G
Sbjct: 204 MVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDG 263
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
A + E++ G D +Y M+ + +G + LL+EM +++ Y
Sbjct: 264 RHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYS 323
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
AL+ Y A+ +++ + GI P+ +I+ + + A F M
Sbjct: 324 ALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATK 383
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
G P ++ +++ E L ++ G + TL F +G
Sbjct: 384 GCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVG 438
>gi|159464329|ref|XP_001690394.1| hypothetical protein CHLREDRAFT_114572 [Chlamydomonas reinhardtii]
gi|158279894|gb|EDP05653.1| predicted protein [Chlamydomonas reinhardtii]
Length = 287
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 82/185 (44%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
+AL+ +A +R Y +I K Q + A M G T T ++ Y K
Sbjct: 94 VALVRSGIQAEVRTYNTVISACNKSGQPEQALKVYEKMLAAGVKPSATTYTALISAYGKK 153
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
G ++ A + F ++ G + +Y S++ A +AG + L +M + Y
Sbjct: 154 GQVEKALDIFRDMIRRGCERNVITYSSLISACEKAGRWEMALELFSKMHKENCKPNVVTY 213
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
+L+ S G+ E A +FE +Q G PD+ LI AY+ GQ ++A AF+ M+
Sbjct: 214 NSLIAACSHGGHWEKASELFEQMQTQGCKPDSITYCGLITAYERGGQWRRALKAFEQMQS 273
Query: 339 AGLEP 343
G P
Sbjct: 274 QGCHP 278
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 12/208 (5%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I G Q++ A + M+ RG C+ T + ++ + KA L +A++ ++++
Sbjct: 3 YTTMISQCGSHQQLRRALELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQML 62
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGE------VLLREMDAQEVYVGSEVYKALLRGYS 286
G + +Y ++ V A E L+R EV Y ++ +
Sbjct: 63 EEGCSPNLVTYN--ILIDVEASKRKTTERRRLAVALVRSGIQAEV----RTYNTVISACN 116
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
+G E A +V+E + AG+ P A LI+AY GQ +KA F++M + G E +
Sbjct: 117 KSGQPEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALDIFRDMIRRGCERNVI 176
Query: 347 CVALILSACEKENQLNRALEFLIDLERD 374
+ ++SACEK + ALE + ++
Sbjct: 177 TYSSLISACEKAGRWEMALELFSKMHKE 204
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 63/138 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I YGKK Q++ A + M RRG + +T + ++ KAG +MA E F ++
Sbjct: 143 YTALISAYGKKGQVEKALDIFRDMIRRGCERNVITYSSLISACEKAGRWEMALELFSKMH 202
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ +Y S++ A G ++ L +M Q S Y L+ Y G
Sbjct: 203 KENCKPNVVTYNSLIAACSHGGHWEKASELFEQMQTQGCKPDSITYCGLITAYERGGQWR 262
Query: 293 GAQRVFEAIQFAGITPDA 310
A + FE +Q G PDA
Sbjct: 263 RALKAFEQMQSQGCHPDA 280
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 89/215 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+LEE N+ Y +I K + +A+ R G + T ++ +K+G
Sbjct: 61 MLEEGCSPNLVTYNILIDVEASKRKTTERRRLAVALVRSGIQAEVRTYNTVISACNKSGQ 120
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + +E++ G +Y +++ AY + G +++ + R+M + Y +
Sbjct: 121 PEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALDIFRDMIRRGCERNVITYSS 180
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G E A +F + P+ LI A G +KA F+ M+ G
Sbjct: 181 LISACEKAGRWEMALELFSKMHKENCKPNVVTYNSLIAACSHGGHWEKASELFEQMQTQG 240
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+P +++A E+ Q RAL+ ++ G
Sbjct: 241 CKPDSITYCGLITAYERGGQWRRALKAFEQMQSQG 275
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 79/169 (46%)
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
T T M+ L+ A E E++ G + +Y +++ ++A LD + + ++M
Sbjct: 2 TYTTMISQCGSHQQLRRALELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQM 61
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
+ Y L+ + + +R+ A+ +GI + R +I+A +GQ
Sbjct: 62 LEEGCSPNLVTYNILIDVEASKRKTTERRRLAVALVRSGIQAEVRTYNTVISACNKSGQP 121
Query: 327 QKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
++A ++ M AG++PS ++SA K+ Q+ +AL+ D+ R G
Sbjct: 122 EQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALDIFRDMIRRG 170
>gi|255546465|ref|XP_002514292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546748|gb|EEF48246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 608
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 115/287 (40%), Gaps = 27/287 (9%)
Query: 89 KQAISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLM 148
K+A+ F + CK P T + L+ + KP LK L LM
Sbjct: 145 KEAMKIFQKMKDTGCK----------PTTSTFNTLIKGYGNAGKPEEG-----LKMLHLM 189
Query: 149 EHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTL 208
L+ S + N R Y ++ + K I+ A N L M G D VT
Sbjct: 190 S------------LDGSVKPNDRTYNILVRAWCSKKNIEEAWNVLHKMVASGIQPDVVTY 237
Query: 209 TVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
++ Y++ G AE+ E++ ++R+ G +V Y + G + + M
Sbjct: 238 NILARAYAQKGETLRAEDLILEMQYEKVAPNERTCGIIVNGYCKEGNMIEALRFVYRMKE 297
Query: 269 QEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
V+ ++ +L++G+ +++G ++ G+ PD + ++NA+ AG K
Sbjct: 298 LGVHPNLVIFNSLIKGFLDITDTDGVDEALTLMEEYGVKPDVITFSTIMNAWSSAGLMDK 357
Query: 329 AYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
F +M KAG+EP +++ + + A L + + G
Sbjct: 358 CQEIFNDMAKAGIEPDIHAFSILAKGYVRAGETENAESVLTSMAKSG 404
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 114/251 (45%), Gaps = 3/251 (1%)
Query: 157 AELALLEESFE---ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVV 213
AE +LE +E N R I++GY K+ + A + MK G + V ++
Sbjct: 253 AEDLILEMQYEKVAPNERTCGIIVNGYCKEGNMIEALRFVYRMKELGVHPNLVIFNSLIK 312
Query: 214 MYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYV 273
+ + +E ++ G D ++ +++ A+ AG++D+ + + +M +
Sbjct: 313 GFLDITDTDGVDEALTLMEEYGVKPDVITFSTIMNAWSSAGLMDKCQEIFNDMAKAGIEP 372
Query: 274 GSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAF 333
+ L +GY G +E A+ V ++ +G+ P+ +C +I+ + AG+ + A +
Sbjct: 373 DIHAFSILAKGYVRAGETENAESVLTSMAKSGVRPNVVICTTIISGWCSAGKMENAKMVY 432
Query: 334 QNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRL 393
+ M + G+ P+ K ++ + Q +A E L +E G K +A ++ +
Sbjct: 433 EKMCEIGISPNLKTFETLIWGYAEARQPGKAEELLQLMEEKGVFPEKSTIQLVADAWRNI 492
Query: 394 GVVEEVEHVLR 404
G++ E + + +
Sbjct: 493 GLLCEAKRITK 503
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 91/232 (39%), Gaps = 1/232 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFI-CDQVTLTVMVVMYSKAGNLKMAEETFEEI 231
+ +I GYG + + L M G + + T ++V + N++ A ++
Sbjct: 166 FNTLIKGYGNAGKPEEGLKMLHLMSLDGSVKPNDRTYNILVRAWCSKKNIEEAWNVLHKM 225
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
G D +Y + AY + G R E L+ EM ++V ++ GY GN
Sbjct: 226 VASGIQPDVVTYNILARAYAQKGETLRAEDLILEMQYEKVAPNERTCGIIVNGYCKEGNM 285
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALI 351
A R ++ G+ P+ + LI + + A M + G++P + I
Sbjct: 286 IEALRFVYRMKELGVHPNLVIFNSLIKGFLDITDTDGVDEALTLMEEYGVKPDVITFSTI 345
Query: 352 LSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
++A +++ E D+ + G A LA + R G E E VL
Sbjct: 346 MNAWSSAGLMDKCQEIFNDMAKAGIEPDIHAFSILAKGYVRAGETENAESVL 397
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI 301
+Y ++V A + + +L+ +++ + S +Y A++ +S +GN + A ++F+ +
Sbjct: 95 TYTTLVAALTKLKHFESIFLLISKVEENGMKPDSILYNAMINAFSESGNVKEAMKIFQKM 154
Query: 302 QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG-LEPSDKCVALILSA-CEKEN 359
+ G P LI Y AG+ ++ M G ++P+D+ +++ A C K+N
Sbjct: 155 KDTGCKPTTSTFNTLIKGYGNAGKPEEGLKMLHLMSLDGSVKPNDRTYNILVRAWCSKKN 214
>gi|255661136|gb|ACU25737.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 426
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 106/218 (48%), Gaps = 4/218 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++SK G L
Sbjct: 213 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWSKVGKLDR 272
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ Y +M++AY +AG++ + LL E+ + + ++ +L
Sbjct: 273 AAMLFQKLRSSGVDIDQVLYQTMIVAYEKAGLVAHAKRLLHELKRPD-NIPRDIAIHILV 331
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + + F M G P
Sbjct: 332 G---AGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMCGLGYFP 388
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKE 381
+ALIL+A K ++ ++A + ++++ G + E
Sbjct: 389 DSNVIALILNAYGKLHEFDKANDVYMEMQEVGCVFSDE 426
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 90/205 (43%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 113 NTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 172
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 173 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 232
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G++
Sbjct: 233 LEHEKANNLIQEMQNRGIEPNSITYSTIISIWSKVGKLDRAAMLFQKLRSSGVDIDQVLY 292
Query: 349 ALILSACEKENQLNRALEFLIDLER 373
++ A EK + A L +L+R
Sbjct: 293 QTMIVAYEKAGLVAHAKRLLHELKR 317
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 101/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F +I Y +I+ +GK + A + + M+ G + + + ++ MY + A
Sbjct: 75 FTPDIVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEAL 134
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 135 SVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 194
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + ++ Y + +KA Q M+ G+E
Sbjct: 195 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIE 251
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ +++ G+V + +
Sbjct: 252 PNSITYSTIISIWSKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYEKAGLVAHAKRL 311
Query: 403 LRE 405
L E
Sbjct: 312 LHE 314
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ A + L M++ D V + ++ + K + A F +K
Sbjct: 12 YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 71
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +M+ + +A + L+ EM V + Y LL Y N
Sbjct: 72 RSGFTPDIVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFL 131
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF ++ D C ++I+ Y G +++A F MRK G+EP+
Sbjct: 132 EALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 32/172 (18%), Positives = 76/172 (44%), Gaps = 2/172 (1%)
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
D+ +Y +++ + + G+ D L++M+ V +Y L+ + A +F
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
++ +G TPD +IN + A ++A + MR AG+ P+ + +L+ +
Sbjct: 68 SRLKRSGFTPDIVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVEN 127
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRE 410
+ AL ++ ++ + + +LG+ +E + + +G+R+
Sbjct: 128 KKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF--WGMRK 177
>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 827
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 86/208 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N + +I+G+ K+ ++ A L MK G + D + ++++ + G++ +
Sbjct: 390 NSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLM 449
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
EE++ SY S++ + ML + + A S VY+ L+ G+ M
Sbjct: 450 EEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQ 509
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G+ + A ++ E + + P A C LI Y G +A F M + G+ P
Sbjct: 510 GDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIAC 569
Query: 349 ALILSACEKENQLNRALEFLIDLERDGF 376
IL + AL L D + GF
Sbjct: 570 NYILDGSCRAGYFKEALTLLEDFQEHGF 597
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 86/185 (46%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L+ + ++ +Y+ +I G+ K+ + A N M + G + T T+++ ++S +
Sbjct: 627 MLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHK 686
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A F+E+K G LD+ SY ++++ + + + L EM + Y
Sbjct: 687 MHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTC 746
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G+ + + A VF+ + + PD +LI+ Y G +A+ + M+ G
Sbjct: 747 IIDGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKG 806
Query: 341 LEPSD 345
+ P D
Sbjct: 807 VLPDD 811
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 85/200 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y+ +I+ + K + + + M+ V+ T ++ K L+ A + F
Sbjct: 425 DVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIF 484
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
I D Y +++ + G +D LL EM E+ + ++L+RGY
Sbjct: 485 HSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKL 544
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A VF A+ GI PD C +++ AG ++A T ++ ++ G +
Sbjct: 545 GLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSY 604
Query: 349 ALILSACEKENQLNRALEFL 368
I+ KE RALE L
Sbjct: 605 NAIIYKLCKEGYPERALELL 624
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 85/201 (42%), Gaps = 2/201 (0%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
+I GY K A AM R G D + ++ +AG K A E+ + G
Sbjct: 537 LIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHG 596
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
L+ SY +++ + G +R LL M + V Y L+ G++ N + A
Sbjct: 597 FNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAV 656
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD-KCVALILSA 354
+F + GIT + +L++ + + + +AY F+ M++ GL LI+
Sbjct: 657 NLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGF 716
Query: 355 CEKENQLNRALEFLIDLERDG 375
C ++ +A ++ R+G
Sbjct: 717 CNNR-EMKKAWALFEEMSREG 736
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 87/206 (42%), Gaps = 4/206 (1%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY-SKAG---NLK 222
E +IR ++ + +++ +K RG + T T+M+ Y S G ++
Sbjct: 279 EPDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMR 338
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A +I GE +Y + + + G ++ +L+R + + S + ++
Sbjct: 339 QAAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVI 398
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G+ G A +V E ++ +GI PD ++LINA+ G K + M + ++
Sbjct: 399 YGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIK 458
Query: 343 PSDKCVALILSACEKENQLNRALEFL 368
PS ++ K+N L A++
Sbjct: 459 PSIVSYTSLIHGLCKKNMLQNAVDIF 484
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/212 (18%), Positives = 86/212 (40%), Gaps = 1/212 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E F N Y II+ K+ + A L M +R + V + ++ ++K N K
Sbjct: 594 EHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFK 653
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A F + +G + +Y ++ + + + + +EM + + + Y L+
Sbjct: 654 RAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLI 713
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G+ N + A +FE + G +P+ +I+ + + + A F M + +
Sbjct: 714 VGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSVI 773
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERD 374
P +++ K ++A + L D+ +D
Sbjct: 774 PDVVTYTVLIDWYHKHGYFDQAHK-LYDVMKD 804
>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g11690-like [Glycine max]
Length = 556
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 109/254 (42%), Gaps = 4/254 (1%)
Query: 159 LALLEE-SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSK 217
LA+LEE N+ YT +I G K + A+N M R G + +Q T +V++ + K
Sbjct: 181 LAVLEEFGLSPNVVIYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFK 240
Query: 218 AGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
G + + +E + G + +Y ++ Y GM+D+ + EM + + G
Sbjct: 241 QGLQREGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMT 300
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y L+ G A ++ + G++P+ +LIN + G+ A F ++
Sbjct: 301 YNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLK 360
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
+GL P+ +++ K L AL+ + ++E K L F RL +
Sbjct: 361 SSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTD 420
Query: 398 ---EVEHVLREYGL 408
E+ ++ + GL
Sbjct: 421 KACEMHSLMEKSGL 434
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 77/176 (43%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
NI Y +I+G+ ++ A +K G VT ++ YSK NL A +
Sbjct: 332 NIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLV 391
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E++ K +Y ++ A+ R D+ + M+ + Y L+ G +N
Sbjct: 392 KEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVN 451
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
GN + A + F+++ + P++ + +I+ Y G S +A M +G+ P+
Sbjct: 452 GNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPN 507
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/234 (18%), Positives = 99/234 (42%), Gaps = 8/234 (3%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E+ + Y +I G + + A + + + G + VT +++ + G +
Sbjct: 291 EKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMD 350
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVR----AGMLDRGEVLLREMDAQEVYVGSEVY 278
A F ++K G +Y +++ Y + AG LD L++EM+ + + Y
Sbjct: 351 TAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALD----LVKEMEERCIARSKVTY 406
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
L+ ++ ++ A + ++ +G+ PD ++LI+ + G ++A F+++ +
Sbjct: 407 TILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGE 466
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKR 392
L+P+ ++ KE RAL L ++ G + + C+ R
Sbjct: 467 MHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTMGLLCR 520
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/174 (20%), Positives = 76/174 (43%), Gaps = 3/174 (1%)
Query: 238 LDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRV 297
L+ S+G M+ AG R LL ++ + +Y L+ G NG+ A+ +
Sbjct: 156 LNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDVMLAKNL 215
Query: 298 FEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEK 357
F + G+ P+ ++L+N + G ++ + ++NM ++G+ P+ ++S
Sbjct: 216 FCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLISEYCN 275
Query: 358 ENQLNRALEFLIDLERDGFMVGKEASCTLAAWF---KRLGVVEEVEHVLREYGL 408
+ +++A + ++ G G L K+ G ++ H + + GL
Sbjct: 276 DGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGL 329
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 108/251 (43%), Gaps = 4/251 (1%)
Query: 160 ALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
AL EE ++R Y+ +IHG K + MK +G D + ++ +
Sbjct: 573 ALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGF 632
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
K+G + A + EE+K G +YGS+V + LD +L E + V +
Sbjct: 633 CKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNV 692
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
+Y +L+ G+ G + A + E + G+TP++ L++A A + +A FQN
Sbjct: 693 VIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQN 752
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGV 395
M+ P+ +++++ + N+A F ++++ G T+ A + G
Sbjct: 753 MKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGN 812
Query: 396 VEEVEHVLREY 406
V E + +
Sbjct: 813 VMEARGLFDRF 823
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 105/246 (42%), Gaps = 5/246 (2%)
Query: 157 AELALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMV 212
A L+LL+E SF A++ Y I +GK ++ A MK +G + D VT T ++
Sbjct: 256 AALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLI 315
Query: 213 VMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY 272
+ KA L A E FEE+ L +Y +M+M Y AG D LL +
Sbjct: 316 GVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCI 375
Query: 273 VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTA 332
Y +L G E A R+ + ++ P+ +LI+ AG+ + A
Sbjct: 376 PSVIAYNCILTCLGRKGKVEEALRIHDEMR-QDAAPNLTTYNILIDMLCKAGELEAALKV 434
Query: 333 FQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKR 392
M++AGL P+ V +++ K +L+ A + L+ C+L R
Sbjct: 435 QDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGR 494
Query: 393 LGVVEE 398
G V++
Sbjct: 495 RGRVDD 500
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 102/235 (43%)
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
R + +I G G++ ++ +A + M I + V T ++ + K G + + ++E
Sbjct: 483 RTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKE 542
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
+ G D S + +AG +++G L E+ AQ + Y L+ G G
Sbjct: 543 MVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGF 602
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
S ++F ++ G+ D +I+ + +G+ KAY + M+ GL+P+
Sbjct: 603 SRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGS 662
Query: 351 ILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ K ++L+ A + + G + +L F ++G ++E +L E
Sbjct: 663 VVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEE 717
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 95/224 (42%), Gaps = 1/224 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ YT +I + K + ++ M RG D + L + KAG ++ F
Sbjct: 516 NVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALF 575
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
EEIK G D RSY ++ V+AG L EM Q +++ Y ++ G+ +
Sbjct: 576 EEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKS 635
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A ++ E ++ G+ P +++ + +AY F+ + G++ +
Sbjct: 636 GKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIY 695
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEA-SCTLAAWFK 391
+ ++ K +++ A L +L + G +C L A K
Sbjct: 696 SSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVK 739
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 98/237 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I K +++ A MK G + +T+ +M+ KA L A F
Sbjct: 411 NLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIF 470
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ D R++ S++ R G +D L +M + VY +L++ +
Sbjct: 471 LGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKC 530
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G E ++++ + G +PD + ++ AG+ +K F+ ++ GL P +
Sbjct: 531 GRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSY 590
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++++ K + +++ G + A T+ F + G V++ +L E
Sbjct: 591 SILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEE 647
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 82/213 (38%), Gaps = 35/213 (16%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E +EAN+ +T ++ + ++ +I A + L MK F D V V + + K G +
Sbjct: 231 EIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVD 290
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
MA + F E+K G D +Y +++ +A LD L E+D Y ++
Sbjct: 291 MAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMI 350
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
GY AG+ +AY+ + ++ G
Sbjct: 351 MGYGS-----------------------------------AGKFDEAYSLLERQKRKGCI 375
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDG 375
PS IL+ ++ ++ AL ++ +D
Sbjct: 376 PSVIAYNCILTCLGRKGKVEEALRIHDEMRQDA 408
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 56/292 (19%), Positives = 100/292 (34%), Gaps = 38/292 (13%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E+ ++ Y +I G+ K ++ A L MK +G VT +V +K L
Sbjct: 615 EQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLD 674
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAY-------------------------------- 250
A FEE K +G L+ Y S++ +
Sbjct: 675 EAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLL 734
Query: 251 ---VRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGIT 307
V+A +D +V + M + + Y ++ G M A ++ +Q G+
Sbjct: 735 DALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLK 794
Query: 308 PDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
P+ +I AG +A F + +G P C ++ N+ A
Sbjct: 795 PNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIV 854
Query: 368 LIDLERDGFMVGKEASCTLAAWFKRLGVVEE---VEHVLREYGLRETYSKIP 416
+ G V + L + +E+ V VLRE + +++P
Sbjct: 855 FEETRLKGCRVNSKTCVVLLDALHKADCLEQAAIVGAVLREMAKSQHATRLP 906
>gi|299473436|emb|CBN77833.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1139
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 88/168 (52%), Gaps = 3/168 (1%)
Query: 207 TLTVMVVMYSKAG---NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
T+ + S+AG +++AE F E+ G D ++ S++ A+ +AG D+ +
Sbjct: 128 TIVTFSTLISRAGACRRVRLAERFFREMLEAGITPDVQAINSLINAFAKAGSPDQALKVF 187
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
+M V + L+ G+ + A++VF + AG++P+ R + LI+++ +
Sbjct: 188 DQMSRYGVTPSVITFNTLIDACGRAGDIDRARQVFSRLSQAGLSPNDRTFSALIHSHAVQ 247
Query: 324 GQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDL 371
GQ +A++ Q MR GLEP+ + +++AC + QL RA + L ++
Sbjct: 248 GQVDEAFSWLQEMRARGLEPNRVTYSALINACGRAGQLARAFQTLDEM 295
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 106/252 (42%), Gaps = 6/252 (2%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+LE +++ +I+ + K A M R G +T ++ +AG+
Sbjct: 155 MLEAGITPDVQAINSLINAFAKAGSPDQALKVFDQMSRYGVTPSVITFNTLIDACGRAGD 214
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + F + G + R++ +++ ++ G +D L+EM A+ + Y A
Sbjct: 215 IDRARQVFSRLSQAGLSPNDRTFSALIHSHAVQGQVDEAFSWLQEMRARGLEPNRVTYSA 274
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G A + + + GI P+ LI+A + + ++ F+ MR+ G
Sbjct: 275 LINACGRAGQLARAFQTLDEMFGTGIEPNVVTWTTLIDACGKGKELEWSFKLFKEMRERG 334
Query: 341 LEPSDKCVALILSACEKENQLNRA---LEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
P+ + ++ AC K ++L+ A LE ++D+ G + +L RLG +
Sbjct: 335 TVPNGVTCSALMDACLKADELDLAFAVLEHMLDV---GIEPTEVTYTSLLTQCARLGQAD 391
Query: 398 EVEHVLREYGLR 409
VL E R
Sbjct: 392 RAGIVLDELNKR 403
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 94/216 (43%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
A+L I ++ +I G +++ AE M G D + ++ ++KAG
Sbjct: 119 AMLACQLRPTIVTFSTLISRAGACRRVRLAERFFREMLEAGITPDVQAINSLINAFAKAG 178
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ A + F+++ G ++ +++ A RAG +DR + + + +
Sbjct: 179 SPDQALKVFDQMSRYGVTPSVITFNTLIDACGRAGDIDRARQVFSRLSQAGLSPNDRTFS 238
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
AL+ +++ G + A + ++ G+ P+ + LINA AGQ +A+ M
Sbjct: 239 ALIHSHAVQGQVDEAFSWLQEMRARGLEPNRVTYSALINACGRAGQLARAFQTLDEMFGT 298
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
G+EP+ ++ AC K +L + + ++ G
Sbjct: 299 GIEPNVVTWTTLIDACGKGKELEWSFKLFKEMRERG 334
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 114/280 (40%), Gaps = 35/280 (12%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
LL + YT +IHG +A M RRG VT VM+ K G
Sbjct: 36 LLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGM 95
Query: 221 L--------KMAEET---------------------------FEEIKLLGEPLDKRSYGS 245
L KM E+ F E++ LG ++RS+ +
Sbjct: 96 LEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNT 155
Query: 246 MVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAG 305
+++ + +D+ + EM+A+++ S Y L+ G + G A ++F+ + +G
Sbjct: 156 IILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSG 215
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
ITP A ++I+ +A +A F++MR G PS +++ A K +L+ A
Sbjct: 216 ITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAF 275
Query: 366 EFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
L + DG + TL + + V++ H+L +
Sbjct: 276 RLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLED 315
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 88/208 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+ ++ ++ Y+ +I G ++ +A + L M +R VT ++ KAG
Sbjct: 281 MTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGR 340
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+K A E + + G+ D +Y ++V + RAG +R LL +M A+ + Y A
Sbjct: 341 IKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTA 400
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G A VF ++ +G P+ LI + AGQ F M AG
Sbjct: 401 LVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAG 460
Query: 341 LEPSDKCVALILSACEKENQLNRALEFL 368
+ P + + K + RALE L
Sbjct: 461 ISPDHVVYGTLAAELCKSGRSARALEIL 488
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 98/232 (42%), Gaps = 2/232 (0%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
+IHG K +I+ A L AM G D VT +V + +AG + A E ++ G
Sbjct: 331 LIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARG 390
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
+ +Y ++V +A L + +M + Y AL+ G+ G +G
Sbjct: 391 LAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGL 450
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS--DKCVALILS 353
++F + AGI+PD + L +G+S +A + R++ + D+ +
Sbjct: 451 KLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVD 510
Query: 354 ACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ ++ AL F+ D+ R G + E +L A + G E VL E
Sbjct: 511 GLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEE 562
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 87/215 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L+ + Y +IHG + A +M+ +G + T +++ + K G
Sbjct: 211 MLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGK 270
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A + + G D +Y +++ +D LL +M ++
Sbjct: 271 LDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNT 330
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G G + A+ V +A+ +G +PD L++ + AGQ+++A +M G
Sbjct: 331 LIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARG 390
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
L P+ ++S K N+L A ++ G
Sbjct: 391 LAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSG 425
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 99/230 (43%), Gaps = 9/230 (3%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
A++ ++ Y ++HG+ + Q + A L M RG + VT T +V KA
Sbjct: 350 AMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKAN 409
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
L A F ++K G + +Y ++++ + AG +D G L EM + VY
Sbjct: 410 RLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYG 469
Query: 280 ALLRGYSMNGNSEGAQRVF----EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
L +G S A + E+++ + A ++ AG+ + A ++
Sbjct: 470 TLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFA--VDGLLEAGKMEMALGFVRD 527
Query: 336 MRKAGLEPS-DKCVALILSACE--KENQLNRALEFLIDLERDGFMVGKEA 382
M + G P+ ++C +L+ C+ + + LE ++DL G GK A
Sbjct: 528 MVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMDLAYGGKARGKAA 577
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/167 (19%), Positives = 69/167 (41%)
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
D SYG ++ +AG L+ L +++ V + Y +L+ G M + + A+ +F
Sbjct: 9 DSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELF 68
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
+ G P ++I+A G ++A + M + G P ++ K
Sbjct: 69 ADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKS 128
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+++ AL ++ER G + + T+ + +++ V E
Sbjct: 129 SRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHE 175
>gi|168056841|ref|XP_001780426.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695174|dbj|BAD67152.1| PpPPR_38 [Physcomitrella patens]
gi|162668102|gb|EDQ54716.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 513
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 88/193 (45%), Gaps = 17/193 (8%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
EA+ Y +I+ + K + A L M+ G CD++T T ++ YS+ MAE
Sbjct: 315 VEASTTLYNTLINIHSKAEAPEKARAVLQLMQADGCQCDEITYTSVMEAYSRNKQPLMAE 374
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
E+K G SYG ++ AY RAG L E +LR M + E+Y ++ GY
Sbjct: 375 SMMGEMKRAGIQPGPVSYGVLISAYCRAGRLGDAERILRAMQNAKCKPTVEIYNMMISGY 434
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDA------RM----C-------ALLINAYQMAGQSQK 328
+ A+R+F+ +Q G+ PDA RM C +L+ AY S
Sbjct: 435 ASAKMRSQAERMFQTMQDCGLRPDAAEDCYIRMQQLGCKPNAVTYKILLKAYTDYNNSID 494
Query: 329 AYTAFQNMRKAGL 341
A +MRKAG+
Sbjct: 495 AERIRLDMRKAGI 507
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 102/239 (42%), Gaps = 1/239 (0%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
+ ++ YT +I G+GK + M+R D TV++ Y G +AE
Sbjct: 176 LKPDVVSYTALIQGFGKLKSYNKVTDVFSRMQRNRCPPDLKLCTVLISTYGNGGLPVLAE 235
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+ + G D +Y ++V AY + G+ + E L +M + V Y AL+ Y
Sbjct: 236 SAMQYAQAQGLQPDAIAYTALVHAYAQEGLWEEAEKTLSDMLDVGI-VDDRPYAALVAAY 294
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
G ++ ++ E ++ +G+ + LIN + A +KA Q M+ G + +
Sbjct: 295 GKAGLTDNVNKILETMKASGVEASTTLYNTLINIHSKAEAPEKARAVLQLMQADGCQCDE 354
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
++ A + Q A + +++R G G + L + + R G + + E +LR
Sbjct: 355 ITYTSVMEAYSRNKQPLMAESMMGEMKRAGIQPGPVSYGVLISAYCRAGRLGDAERILR 413
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 119/263 (45%), Gaps = 11/263 (4%)
Query: 112 CVSPETGNLSDLLAAWVRF----MKPRRADWLAVLKQLKLMEHPLYLQVAEL--ALLEES 165
CV + G + D + + RF +KP + A+++ ++ Y +V ++ +
Sbjct: 155 CV--KDGRMRDAMTIFKRFEGAGLKPDVVSYTALIQGFGKLKS--YNKVTDVFSRMQRNR 210
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
+++ T +I YG AE+ + + +G D + T +V Y++ G + AE
Sbjct: 211 CPPDLKLCTVLISTYGNGGLPVLAESAMQYAQAQGLQPDAIAYTALVHAYAQEGLWEEAE 270
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+T ++ +G +D R Y ++V AY +AG+ D +L M A V + +Y L+ +
Sbjct: 271 KTLSDMLDVGI-VDDRPYAALVAAYGKAGLTDNVNKILETMKASGVEASTTLYNTLINIH 329
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
S E A+ V + +Q G D ++ AY Q A + M++AG++P
Sbjct: 330 SKAEAPEKARAVLQLMQADGCQCDEITYTSVMEAYSRNKQPLMAESMMGEMKRAGIQPGP 389
Query: 346 KCVALILSACEKENQLNRALEFL 368
+++SA + +L A L
Sbjct: 390 VSYGVLISAYCRAGRLGDAERIL 412
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 72/173 (41%)
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
R Y ++ YGK N L MK G ++ ++SKA + A +
Sbjct: 285 RPYAALVAAYGKAGLTDNVNKILETMKASGVEASTTLYNTLINIHSKAEAPEKARAVLQL 344
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
++ G D+ +Y S++ AY R E ++ EM + G Y L+ Y G
Sbjct: 345 MQADGCQCDEITYTSVMEAYSRNKQPLMAESMMGEMKRAGIQPGPVSYGVLISAYCRAGR 404
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
A+R+ A+Q A P + ++I+ Y A +A FQ M+ GL P
Sbjct: 405 LGDAERILRAMQNAKCKPTVEIYNMMISGYASAKMRSQAERMFQTMQDCGLRP 457
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 80/182 (43%), Gaps = 1/182 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT ++H Y ++ + AE TL M G + D +V Y KAG + E +K
Sbjct: 253 YTALVHAYAQEGLWEEAEKTLSDMLDVGIV-DDRPYAALVAAYGKAGLTDNVNKILETMK 311
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G Y +++ + +A ++ +L+ M A Y +++ YS N
Sbjct: 312 ASGVEASTTLYNTLINIHSKAEAPEKARAVLQLMQADGCQCDEITYTSVMEAYSRNKQPL 371
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ + ++ AGI P +LI+AY AG+ A + M+ A +P+ + +++
Sbjct: 372 MAESMMGEMKRAGIQPGPVSYGVLISAYCRAGRLGDAERILRAMQNAKCKPTVEIYNMMI 431
Query: 353 SA 354
S
Sbjct: 432 SG 433
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 68/163 (41%), Gaps = 1/163 (0%)
Query: 241 RSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEA 300
+ Y S ++ V+ G + + + + + Y AL++G+ + VF
Sbjct: 146 KDYNSALLNCVKDGRMRDAMTIFKRFEGAGLKPDVVSYTALIQGFGKLKSYNKVTDVFSR 205
Query: 301 IQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQ 360
+Q PD ++C +LI+ Y G A +A Q + GL+P ++ A +E
Sbjct: 206 MQRNRCPPDLKLCTVLISTYGNGGLPVLAESAMQYAQAQGLQPDAIAYTALVHAYAQEGL 265
Query: 361 LNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
A + L D+ D +V L A + + G+ + V +L
Sbjct: 266 WEEAEKTLSDM-LDVGIVDDRPYAALVAAYGKAGLTDNVNKIL 307
>gi|168030898|ref|XP_001767959.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680801|gb|EDQ67234.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 957
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 149/341 (43%), Gaps = 15/341 (4%)
Query: 77 WIQIGPNITEEQKQAIS------QFPRKMTKRCKAF---VKQIICVSPETGNLSDLLAAW 127
WI P E+ KQ +S ++ R+ T+ +A V+Q + PE ++
Sbjct: 5 WISRTP---EQMKQYLSDNKWQWRWKRRYTRPVEAAIAAVRQTSSLPPEDVDMRQAQRPD 61
Query: 128 VRFMKPRRADWLAVLKQLKLMEHPLYLQVAEL---ALLEESFEANIRDYTKIIHGYGKKM 184
+R MKP D + L E + Q E L+ + ++ YT ++ YG+
Sbjct: 62 LRVMKPFVKDLGFRDMCIVLKEQRGWRQAREFFEWMKLQIPYSPSVIAYTTLLGIYGQAG 121
Query: 185 QIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYG 244
++ AE TL M G D+V M+ Y++ E +E ++ G Y
Sbjct: 122 KLTLAEETLSEMLDAGVEPDEVAGGCMLEAYARWERYDTLLEFYEAMRQRGLVPSAHVYR 181
Query: 245 SMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFA 304
+M++ +A +L ++ +++ +Y ++ + G +E A F+ ++ A
Sbjct: 182 TMIVTLYKAERHSDALMLWEDLLVEKLEPNFVLYAIIIHILNKEGRTEDAVHTFKDMRAA 241
Query: 305 GITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
G PD + +I A G+ Q++ + +M+K G+ PS ++++ K + A
Sbjct: 242 GHLPDELLYNTIICALGKLGRYQESEALYLDMKKQGIVPSKFTYTIMINVWSKAGRFASA 301
Query: 365 LEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
E L +++R G + + C++ + + G+ EE E + +E
Sbjct: 302 AETLAEMQRSGCIADEVVYCSIINMYGKAGLYEEAEKIFKE 342
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 83/168 (49%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y II GK + Q +E L MK++G + + T T+M+ ++SKAG A ET E++
Sbjct: 250 YNTIICALGKLGRYQESEALYLDMKKQGIVPSKFTYTIMINVWSKAGRFASAAETLAEMQ 309
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D+ Y S++ Y +AG+ + E + +EMD + + Y ++ + + G
Sbjct: 310 RSGCIADEVVYCSIINMYGKAGLYEEAEKIFKEMDTLGLLSHEKSYTSMAKVRAEAGRHA 369
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
A ++F+ + G+ L++ + G ++A + +M +AG
Sbjct: 370 EALKLFDVMAEKGLLTTRMTWNTLLHCFVRIGDVEQATKVYNDMVEAG 417
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 85/180 (47%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M+ G + D VT++++V Y+K G K A + K +G +D +Y + + A +++G
Sbjct: 605 MEENGRMFDAVTVSILVHAYTKEGRFKDAAGLMKRAKKVGVAMDTVAYNTSLKANLKSGN 664
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
L + EM ++ ++ Y L+ +S G+ A + FE + + + D +
Sbjct: 665 LKGALEVYGEMQEADIEPSAKTYTILISLFSKLGDLGRAVQAFEVLNSSEVGADEIAYSQ 724
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+I+ Y AG+ ++A FQ M G +P++ +L A + A L D+ R G
Sbjct: 725 MIHCYGCAGRPKEAADLFQEMETKGFKPNEVIYNNLLDAFARAGLFAEARLLLSDMRRKG 784
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 86/211 (40%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E E + + YT +I + K + A + D++ + M+ Y AG K
Sbjct: 677 EADIEPSAKTYTILISLFSKLGDLGRAVQAFEVLNSSEVGADEIAYSQMIHCYGCAGRPK 736
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A + F+E++ G ++ Y +++ A+ RAG+ +LL +M + S Y L+
Sbjct: 737 EAADLFQEMETKGFKPNEVIYNNLLDAFARAGLFAEARLLLSDMRRKGCPPSSVTYLLLM 796
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
Y G A+ + +Q G+ PD R +I AY G+ A F ++ G+
Sbjct: 797 SAYGSKGKPADAESLLHLMQDRGLYPDCRHYNEVIRAYGNVGKLSDACRIFYELKTVGIG 856
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLER 373
C ++ Q + + DL +
Sbjct: 857 LELGCFRTLVKIHLDHGQFEQGWQIYKDLSQ 887
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 81/179 (45%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
++H Y K+ + ++A + K+ G D V + K+GNLK A E + E++
Sbjct: 620 LVHAYTKEGRFKDAAGLMKRAKKVGVAMDTVAYNTSLKANLKSGNLKGALEVYGEMQEAD 679
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
++Y ++ + + G L R +++ EV Y ++ Y G + A
Sbjct: 680 IEPSAKTYTILISLFSKLGDLGRAVQAFEVLNSSEVGADEIAYSQMIHCYGCAGRPKEAA 739
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSA 354
+F+ ++ G P+ + L++A+ AG +A +MR+ G PS L++SA
Sbjct: 740 DLFQEMETKGFKPNEVIYNNLLDAFARAGLFAEARLLLSDMRRKGCPPSSVTYLLLMSA 798
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 77/181 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
LL E E N Y IIH K+ + ++A +T M+ G + D++ ++ K G
Sbjct: 203 LLVEKLEPNFVLYAIIIHILNKEGRTEDAVHTFKDMRAAGHLPDELLYNTIICALGKLGR 262
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ +E + ++K G K +Y M+ + +AG L EM VY +
Sbjct: 263 YQESEALYLDMKKQGIVPSKFTYTIMINVWSKAGRFASAAETLAEMQRSGCIADEVVYCS 322
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ Y G E A+++F+ + G+ + + AG+ +A F M + G
Sbjct: 323 IINMYGKAGLYEEAEKIFKEMDTLGLLSHEKSYTSMAKVRAEAGRHAEALKLFDVMAEKG 382
Query: 341 L 341
L
Sbjct: 383 L 383
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 2/178 (1%)
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
T T+++ ++SK G+L A + FE + D+ +Y M+ Y AG L +EM
Sbjct: 686 TYTILISLFSKLGDLGRAVQAFEVLNSSEVGADEIAYSQMIHCYGCAGRPKEAADLFQEM 745
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
+ + +Y LL ++ G A+ + ++ G P + LL++AY G+
Sbjct: 746 ETKGFKPNEVIYNNLLDAFARAGLFAEARLLLSDMRRKGCPPSSVTYLLLMSAYGSKGKP 805
Query: 327 QKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASC 384
A + M+ GL P + ++ A +L+ A +L+ G +G E C
Sbjct: 806 ADAESLLHLMQDRGLYPDCRHYNEVIRAYGNVGKLSDACRIFYELKTVG--IGLELGC 861
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 88/204 (43%), Gaps = 1/204 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+++IH YG + + A + M+ +GF ++V ++ +++AG A +++
Sbjct: 722 YSQMIHCYGCAGRPKEAADLFQEMETKGFKPNEVIYNNLLDAFARAGLFAEARLLLSDMR 781
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G P +Y ++ AY G E LL M + +Y Y ++R Y G
Sbjct: 782 RKGCPPSSVTYLLLMSAYGSKGKPADAESLLHLMQDRGLYPDCRHYNEVIRAYGNVGKLS 841
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A R+F ++ GI + L+ + GQ ++ + ++++ ++ + +
Sbjct: 842 DACRIFYELKTVGIGLELGCFRTLVKIHLDHGQFEQGWQIYKDLSQS-FTVDQNLYGIAV 900
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
C + A + ++L+ GF
Sbjct: 901 ELCIGAGRRTEADQLKVELKGKGF 924
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 96/230 (41%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
+I+ YG++ Q A++ +++++ M+ + + L+ A F+ ++ G
Sbjct: 550 MINLYGRRGLFQKAKSLFNSLQKKDHPPSLYVYNTMIKLCAVCKELEEAIFVFDRMEENG 609
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
D + +V AY + G L++ V + + Y L+ +GN +GA
Sbjct: 610 RMFDAVTVSILVHAYTKEGRFKDAAGLMKRAKKVGVAMDTVAYNTSLKANLKSGNLKGAL 669
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
V+ +Q A I P A+ +LI+ + G +A AF+ + + + + + ++
Sbjct: 670 EVYGEMQEADIEPSAKTYTILISLFSKLGDLGRAVQAFEVLNSSEVGADEIAYSQMIHCY 729
Query: 356 EKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ A + ++E GF + L F R G+ E +L +
Sbjct: 730 GCAGRPKEAADLFQEMETKGFKPNEVIYNNLLDAFARAGLFAEARLLLSD 779
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 95/223 (42%), Gaps = 19/223 (8%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+ ++H + + ++ A M G + VT M+ +YSK ++ AE E++
Sbjct: 390 WNTLLHCFVRIGDVEQATKVYNDMVEAG-SANVVTYGNMINLYSKFQMVEDAENLLAEMR 448
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM---------DAQEVY---------VG 274
G D+ YGS V Y + M+D+ ++++EM + +E++ +
Sbjct: 449 ESGVKPDEYIYGSFVKLYCNSDMIDKATMVVQEMKDDGLESVCNEREMFPLGQALQSPID 508
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+++ LL + G A+ + + + AG L+IN Y G QKA + F
Sbjct: 509 TQILNQLLIKRAEAGELREAELLLDKLVEAGGCIVDTAAVLMINLYGRRGLFQKAKSLFN 568
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
+++K PS ++ C +L A+ +E +G M
Sbjct: 569 SLQKKDHPPSLYVYNTMIKLCAVCKELEEAIFVFDRMEENGRM 611
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 86/219 (39%), Gaps = 18/219 (8%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
E+ AN+ Y +I+ Y K +++AEN L M+ G D+ V +Y + +
Sbjct: 415 EAGSANVVTYGNMINLYSKFQMVEDAENLLAEMRESGVKPDEYIYGSFVKLYCNSDMIDK 474
Query: 224 AEETFEEIK------------------LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLRE 265
A +E+K L P+D + +++ AG L E+LL +
Sbjct: 475 ATMVVQEMKDDGLESVCNEREMFPLGQALQSPIDTQILNQLLIKRAEAGELREAELLLDK 534
Query: 266 MDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQ 325
+ + ++ Y G + A+ +F ++Q P + +I + +
Sbjct: 535 LVEAGGCIVDTAAVLMINLYGRRGLFQKAKSLFNSLQKKDHPPSLYVYNTMIKLCAVCKE 594
Query: 326 SQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
++A F M + G V++++ A KE + A
Sbjct: 595 LEEAIFVFDRMEENGRMFDAVTVSILVHAYTKEGRFKDA 633
>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
Length = 675
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 108/237 (45%), Gaps = 16/237 (6%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ YTK+I GY + ++ +A L + R + D V+ M+ GNL MA F
Sbjct: 42 NLHLYTKMIAGYTRNDRLCDA----LKLFDRMSVRDVVSWNSMIKGCLDCGNLGMATRLF 97
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+ + S+ +MV Y++ G ++ + L +M ++V + A++ GY N
Sbjct: 98 DEMP----EKNVISWTTMVNGYLKFGRVELAQRLFLDMHVKDV----AAWNAMVHGYFEN 149
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G E R+FE + + M I + G+S++A F+ M ++G+EP+
Sbjct: 150 GRVEEGVRLFEEMPVRDVISWTSM----IGGLDLNGKSEEALFVFKKMLRSGVEPTWSTF 205
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
A +LSAC + N ++ + + G + S +L ++ +E + E
Sbjct: 206 ACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNE 262
>gi|115465970|ref|NP_001056584.1| Os06g0111300 [Oryza sativa Japonica Group]
gi|113594624|dbj|BAF18498.1| Os06g0111300 [Oryza sativa Japonica Group]
Length = 978
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%)
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
T +M+ +Y + G L+ A E F + LG P+D+++Y +M+ Y +AG +L M
Sbjct: 718 TFNIMISVYGQGGKLEKAVEMFSAAQELGLPIDEKTYTNMLSFYGKAGKHHEASLLFSRM 777
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
+ G + ++ Y+ +G A+ +F+ +Q PD+ LI AY
Sbjct: 778 KEDGIRPGKISFNTMINAYATSGLHNEAEIIFQEMQKNNHVPDSHTYLALIRAYTEGKCY 837
Query: 327 QKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
KA A Q M ++ + PS ++SA KE Q++ A +E G
Sbjct: 838 SKAEEAIQMMLRSNMTPSCTHFNHLISAFLKEGQIDEAQRMYNQMEEAG 886
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 105/242 (43%), Gaps = 10/242 (4%)
Query: 110 IICVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAE---LALLEESF 166
++C G L+D+L + RR D + + M L Q + L E+
Sbjct: 211 LLCAYARWGKLNDMLMFYAAV---RRRDIVPSISVFNFMVSSLQKQKLHGKVIHLWEQML 267
Query: 167 EANIR----DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
EAN+ YT +I Y K+ ++ A + MKRR F+ ++ T ++++ + +K G +
Sbjct: 268 EANVAPNQFTYTVVIGSYAKEGMLEEAMDAFGEMKRRRFVPEEATYSLLISLCAKHGKGE 327
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A ++E+K+ + S++ Y + + L EM+ ++ +Y L+
Sbjct: 328 EALGLYDEMKVKSIVPSNYTCASVLTLYYKNEDYSKALSLFSEMEQNKIVPDEVIYGILV 387
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
R Y G E AQR+FE I AG+ D + + + +A MR ++
Sbjct: 388 RIYGKLGLYEDAQRMFEEIDKAGLLSDEQTYVAMAQVHMNVQNYDRALQVLDAMRARNVK 447
Query: 343 PS 344
PS
Sbjct: 448 PS 449
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 83/177 (46%), Gaps = 1/177 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+++ + +I YG+ +++ A A + G D+ T T M+ Y KAG A F
Sbjct: 715 SMQTFNIMISVYGQGGKLEKAVEMFSAAQELGLPIDEKTYTNMLSFYGKAGKHHEASLLF 774
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+K G K S+ +M+ AY +G+ + E++ +EM S Y AL+R Y+
Sbjct: 775 SRMKEDGIRPGKISFNTMINAYATSGLHNEAEIIFQEMQKNNHVPDSHTYLALIRAYTEG 834
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
A+ + + + +TP LI+A+ GQ +A + M +AG+ P+D
Sbjct: 835 KCYSKAEEAIQMMLRSNMTPSCTHFNHLISAFLKEGQIDEAQRMYNQMEEAGI-PAD 890
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 2/178 (1%)
Query: 180 YGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLD 239
Y K A + M++ + D+V ++V +Y K G + A+ FEEI G D
Sbjct: 355 YYKNEDYSKALSLFSEMEQNKIVPDEVIYGILVRIYGKLGLYEDAQRMFEEIDKAGLLSD 414
Query: 240 KRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFE 299
+++Y +M ++ DR +L M A+ V Y ALLR + + + A+ F
Sbjct: 415 EQTYVAMAQVHMNVQNYDRALQVLDAMRARNVKPSQFSYSALLRCHVAKEDVDAAEDTFR 474
Query: 300 AIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE-PSDKCVALILSACE 356
A+ G PD C L+ Y G KA MRK L+ D CV ++ C+
Sbjct: 475 ALSNYG-PPDVFCCNDLLRLYMRLGHLDKARALILKMRKEALQFDEDLCVTVLEVCCK 531
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 81/193 (41%), Gaps = 1/193 (0%)
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA 224
SF Y ++ + + + A + + +G D VT++++V +K G L A
Sbjct: 641 SFPVGGSVYNAMVDALCRCGKTEEAYRLFMELIDQGHNGDAVTISILVTHLTKQGKLYSA 700
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
++ + G P +++ M+ Y + G L++ + + + + Y +L
Sbjct: 701 VSIYDRMISSGIPRSMQTFNIMISVYGQGGKLEKAVEMFSAAQELGLPIDEKTYTNMLSF 760
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP- 343
Y G A +F ++ GI P +INAY +G +A FQ M+K P
Sbjct: 761 YGKAGKHHEASLLFSRMKEDGIRPGKISFNTMINAYATSGLHNEAEIIFQEMQKNNHVPD 820
Query: 344 SDKCVALILSACE 356
S +ALI + E
Sbjct: 821 SHTYLALIRAYTE 833
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/297 (19%), Positives = 126/297 (42%), Gaps = 10/297 (3%)
Query: 112 CVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELAL---LEESFEA 168
C SP + ++ + +A++V + R + VL +L+ + Q + L+ +E
Sbjct: 116 CSSPSSADMREAMASFVAKLTFR--EMCFVLHELRG-----WRQARDFFAWMKLQLCYEP 168
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ YT ++ YG+ +++ AE T L M + G D V ++ Y++ G L +
Sbjct: 169 SVVAYTILLRLYGQVGKVKLAEVTFLEMLQAGCEPDAVACGTLLCAYARWGKLNDMLMFY 228
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ + MV + + + + L +M V Y ++ Y+
Sbjct: 229 AAVRRRDIVPSISVFNFMVSSLQKQKLHGKVIHLWEQMLEANVAPNQFTYTVVIGSYAKE 288
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G E A F ++ P+ +LLI+ G+ ++A + M+ + PS+
Sbjct: 289 GMLEEAMDAFGEMKRRRFVPEEATYSLLISLCAKHGKGEEALGLYDEMKVKSIVPSNYTC 348
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
A +L+ K ++AL ++E++ + + L + +LG+ E+ + + E
Sbjct: 349 ASVLTLYYKNEDYSKALSLFSEMEQNKIVPDEVIYGILVRIYGKLGLYEDAQRMFEE 405
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 61/143 (42%)
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
+ YT ++ YGK + A MK G +++ M+ Y+ +G AE F+E
Sbjct: 752 KTYTNMLSFYGKAGKHHEASLLFSRMKEDGIRPGKISFNTMINAYATSGLHNEAEIIFQE 811
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
++ D +Y +++ AY + E ++ M + + L+ + G
Sbjct: 812 MQKNNHVPDSHTYLALIRAYTEGKCYSKAEEAIQMMLRSNMTPSCTHFNHLISAFLKEGQ 871
Query: 291 SEGAQRVFEAIQFAGITPDARMC 313
+ AQR++ ++ AGI D C
Sbjct: 872 IDEAQRMYNQMEEAGIPADLACC 894
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 97/248 (39%), Gaps = 28/248 (11%)
Query: 184 MQIQN---AENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDK 240
M +QN A L AM+ R Q + + ++ + ++ AE+TF + G P D
Sbjct: 426 MNVQNYDRALQVLDAMRARNVKPSQFSYSALLRCHVAKEDVDAAEDTFRALSNYGPP-DV 484
Query: 241 RSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEA 300
++ Y+R G LD+ L+ +M + + ++ +L ++ + E
Sbjct: 485 FCCNDLLRLYMRLGHLDKARALILKMRKEALQFDEDLCVTVLEVCCKTSINKDTDNLTEV 544
Query: 301 IQFAG-----ITP-DARMCAL-----------------LINAYQMAGQSQKAYTAFQNMR 337
IQ G + P D+ ++ LI + G + +A ++++
Sbjct: 545 IQNEGSSSKVLNPTDSSTLSMMLKSLLDKPGGLSSVSQLIMKFAREGSTDEAKFLYEHLT 604
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
+ G +P D +A ++ + QL +A + L + F VG + R G E
Sbjct: 605 ELGAKPDDTAIATLIVQYGQAQQLEQA-QKLFETASTSFPVGGSVYNAMVDALCRCGKTE 663
Query: 398 EVEHVLRE 405
E + E
Sbjct: 664 EAYRLFME 671
>gi|410110059|gb|AFV61109.1| pentatricopeptide repeat-containing protein 123, partial
[Acantholippia salsoloides]
Length = 433
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 105/219 (47%), Gaps = 4/219 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 216 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQGRGIEPNSITYSTIISIWGKVGKLDR 275
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ + +M++AY RAG++ + LL E+ + + + + +L
Sbjct: 276 AAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKSPD-NIPRDTAIHILA 334
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + + F MR G P
Sbjct: 335 G---AGRIEEATYVFRRAIDAGEVKDITVFERMIHLFSKYKKYANVVEVFDKMRGLGYFP 391
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEA 382
+AL+L+A K ++ ++A ++++ G + E
Sbjct: 392 DSNVIALVLNAYGKLHEFDKANSVYMEMQEVGCVFSDEV 430
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 101/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y I+ +GK + A + + M+ G + + + + ++ MY + A
Sbjct: 78 FTPDLVAYNAXINVFGKAKLFREARSLISEMRIAGVMPNTASYSTLLTMYVENKKFLEAL 137
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 138 SVFSELREMKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 197
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + ++ Y + +KA Q M+ G+E
Sbjct: 198 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQGRGIE 254
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 255 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRL 314
Query: 403 LRE 405
L E
Sbjct: 315 LHE 317
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 100/236 (42%), Gaps = 4/236 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + ++ + D T +M+ +Y + G K A++ F
Sbjct: 116 NTASYSTLLTMYVENKKFLEALSVFSELREMKCLLDLTTCNIMIDVYGQLGMAKEADKLF 175
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 176 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 235
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G+E
Sbjct: 236 LEHEKANNLIQEMQGRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILF 295
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
++ A E+ + A L +L+ + A LA G +EE +V R
Sbjct: 296 QTMIVAYERAGLVAHAKRLLHELKSPDNIPRDTAIHILAG----AGRIEEATYVFR 347
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 73/172 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ A + L M++ D V + ++ + K + A F +K
Sbjct: 15 YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 74
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y + + + +A + L+ EM V + Y LL Y N
Sbjct: 75 RSGFTPDLVAYNAXINVFGKAKLFREARSLISEMRIAGVMPNTASYSTLLTMYVENKKFL 134
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF ++ D C ++I+ Y G +++A F MRK G+EP+
Sbjct: 135 EALSVFSELREMKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 186
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 33/172 (19%), Positives = 75/172 (43%), Gaps = 2/172 (1%)
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
D+ +Y +++ + + G+ D L++M+ V +Y L+ + A +F
Sbjct: 11 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 70
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
++ +G TPD IN + A ++A + MR AG+ P+ + +L+ +
Sbjct: 71 SRLKRSGFTPDLVAYNAXINVFGKAKLFREARSLISEMRIAGVMPNTASYSTLLTMYVEN 130
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRE 410
+ AL +L ++ + + +LG+ +E + + +G+R+
Sbjct: 131 KKFLEALSVFSELREMKCLLDLTTCNIMIDVYGQLGMAKEADKLF--WGMRK 180
>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Vitis vinifera]
Length = 913
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 103/241 (42%), Gaps = 4/241 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
E F+ N T ++ + + + T + R GF CD T ++ MY K +L
Sbjct: 364 EGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTS 423
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A+ F+ +K + ++ S+V Y GM + LL +M+ + + + ++
Sbjct: 424 AQAVFDNMK----NRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMIS 479
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
GY+M G + A V + G+TP+ LI+ AG ++ + F M++ G+ P
Sbjct: 480 GYAMWGCGKEALAVLHQTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMP 539
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+ + +L AC + L + E R+GF+ + L + + ++ V
Sbjct: 540 NSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVF 599
Query: 404 R 404
R
Sbjct: 600 R 600
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 94/214 (43%), Gaps = 10/214 (4%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
+HGY +++ N L M+ GF + ++T ++ S+ G L M +ET + G
Sbjct: 346 FLHGYKEEVL-----NILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNG 400
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
D S++ YV+ L + + M + ++ + +L+ GYS G E A
Sbjct: 401 FDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIF----AWNSLVSGYSFKGMFEDAL 456
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
R+ ++ GI PD +I+ Y M G ++A + GL P+ ++S
Sbjct: 457 RLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAVLHQTKSLGLTPNVVSWTALISGS 516
Query: 356 EKENQLNRALEFLIDLERDGFMVGKEA-SCTLAA 388
+ +L+F ++++G M + +C L A
Sbjct: 517 SQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRA 550
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 112/252 (44%), Gaps = 13/252 (5%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+E + ++ + +I GY + A L K G + V+ T ++ S+AGN +
Sbjct: 464 KEGIKPDLVTWNGMISGYAMWGCGKEALAVLHQTKSLGLTPNVVSWTALISGSSQAGNNR 523
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVL----LREMDAQEVYVGSEVY 278
+ + F +++ G + S ++ A +L +G+ + +R ++V+V +
Sbjct: 524 DSLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVAT--- 580
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
AL+ YS + + + A +VF IQ T + C +I + + G ++A + F M+K
Sbjct: 581 -ALIDMYSKSSSLKNAHKVFRRIQ--NKTLASWNC--MIMGFAIFGLGKEAISVFNEMQK 635
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGK-EASCTLAAWFKRLGVVE 397
G+ P +LSAC+ + ++ + D +V + E C + R G ++
Sbjct: 636 VGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLD 695
Query: 398 EVEHVLREYGLR 409
E ++ L+
Sbjct: 696 EAWDLIHTMPLK 707
>gi|55295905|dbj|BAD67773.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 1013
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%)
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
T +M+ +Y + G L+ A E F + LG P+D+++Y +M+ Y +AG +L M
Sbjct: 753 TFNIMISVYGQGGKLEKAVEMFSAAQELGLPIDEKTYTNMLSFYGKAGKHHEASLLFSRM 812
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
+ G + ++ Y+ +G A+ +F+ +Q PD+ LI AY
Sbjct: 813 KEDGIRPGKISFNTMINAYATSGLHNEAEIIFQEMQKNNHVPDSHTYLALIRAYTEGKCY 872
Query: 327 QKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
KA A Q M ++ + PS ++SA KE Q++ A +E G
Sbjct: 873 SKAEEAIQMMLRSNMTPSCTHFNHLISAFLKEGQIDEAQRMYNQMEEAG 921
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 105/242 (43%), Gaps = 10/242 (4%)
Query: 110 IICVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAE---LALLEESF 166
++C G L+D+L + RR D + + M L Q + L E+
Sbjct: 211 LLCAYARWGKLNDMLMFYAAV---RRRDIVPSISVFNFMVSSLQKQKLHGKVIHLWEQML 267
Query: 167 EANIR----DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
EAN+ YT +I Y K+ ++ A + MKRR F+ ++ T ++++ + +K G +
Sbjct: 268 EANVAPNQFTYTVVIGSYAKEGMLEEAMDAFGEMKRRRFVPEEATYSLLISLCAKHGKGE 327
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A ++E+K+ + S++ Y + + L EM+ ++ +Y L+
Sbjct: 328 EALGLYDEMKVKSIVPSNYTCASVLTLYYKNEDYSKALSLFSEMEQNKIVPDEVIYGILV 387
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
R Y G E AQR+FE I AG+ D + + + +A MR ++
Sbjct: 388 RIYGKLGLYEDAQRMFEEIDKAGLLSDEQTYVAMAQVHMNVQNYDRALQVLDAMRARNVK 447
Query: 343 PS 344
PS
Sbjct: 448 PS 449
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 83/177 (46%), Gaps = 1/177 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+++ + +I YG+ +++ A A + G D+ T T M+ Y KAG A F
Sbjct: 750 SMQTFNIMISVYGQGGKLEKAVEMFSAAQELGLPIDEKTYTNMLSFYGKAGKHHEASLLF 809
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+K G K S+ +M+ AY +G+ + E++ +EM S Y AL+R Y+
Sbjct: 810 SRMKEDGIRPGKISFNTMINAYATSGLHNEAEIIFQEMQKNNHVPDSHTYLALIRAYTEG 869
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
A+ + + + +TP LI+A+ GQ +A + M +AG+ P+D
Sbjct: 870 KCYSKAEEAIQMMLRSNMTPSCTHFNHLISAFLKEGQIDEAQRMYNQMEEAGI-PAD 925
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 2/178 (1%)
Query: 180 YGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLD 239
Y K A + M++ + D+V ++V +Y K G + A+ FEEI G D
Sbjct: 355 YYKNEDYSKALSLFSEMEQNKIVPDEVIYGILVRIYGKLGLYEDAQRMFEEIDKAGLLSD 414
Query: 240 KRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFE 299
+++Y +M ++ DR +L M A+ V Y ALLR + + + A+ F
Sbjct: 415 EQTYVAMAQVHMNVQNYDRALQVLDAMRARNVKPSQFSYSALLRCHVAKEDVDAAEDTFR 474
Query: 300 AIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE-PSDKCVALILSACE 356
A+ G PD C L+ Y G KA MRK L+ D CV ++ C+
Sbjct: 475 ALSNYG-PPDVFCCNDLLRLYMRLGHLDKARALILKMRKEALQFDEDLCVTVLEVCCK 531
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/297 (19%), Positives = 126/297 (42%), Gaps = 10/297 (3%)
Query: 112 CVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELAL---LEESFEA 168
C SP + ++ + +A++V + R + VL +L+ + Q + L+ +E
Sbjct: 116 CSSPSSADMREAMASFVAKLTFR--EMCFVLHELRG-----WRQARDFFAWMKLQLCYEP 168
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ YT ++ YG+ +++ AE T L M + G D V ++ Y++ G L +
Sbjct: 169 SVVAYTILLRLYGQVGKVKLAEVTFLEMLQAGCEPDAVACGTLLCAYARWGKLNDMLMFY 228
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ + MV + + + + L +M V Y ++ Y+
Sbjct: 229 AAVRRRDIVPSISVFNFMVSSLQKQKLHGKVIHLWEQMLEANVAPNQFTYTVVIGSYAKE 288
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G E A F ++ P+ +LLI+ G+ ++A + M+ + PS+
Sbjct: 289 GMLEEAMDAFGEMKRRRFVPEEATYSLLISLCAKHGKGEEALGLYDEMKVKSIVPSNYTC 348
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
A +L+ K ++AL ++E++ + + L + +LG+ E+ + + E
Sbjct: 349 ASVLTLYYKNEDYSKALSLFSEMEQNKIVPDEVIYGILVRIYGKLGLYEDAQRMFEE 405
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 61/143 (42%)
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
+ YT ++ YGK + A MK G +++ M+ Y+ +G AE F+E
Sbjct: 787 KTYTNMLSFYGKAGKHHEASLLFSRMKEDGIRPGKISFNTMINAYATSGLHNEAEIIFQE 846
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
++ D +Y +++ AY + E ++ M + + L+ + G
Sbjct: 847 MQKNNHVPDSHTYLALIRAYTEGKCYSKAEEAIQMMLRSNMTPSCTHFNHLISAFLKEGQ 906
Query: 291 SEGAQRVFEAIQFAGITPDARMC 313
+ AQR++ ++ AGI D C
Sbjct: 907 IDEAQRMYNQMEEAGIPADLACC 929
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 80/199 (40%), Gaps = 1/199 (0%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
+ L+++ + + ++ K+ + Q AEN + D V + ++
Sbjct: 670 MELIDQGHNGDAVTISILVTHLTKQEKFQEAENIIYRCLHDEAELDTVVYNTFIKSMLES 729
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
G L A ++ + G P +++ M+ Y + G L++ + + + + Y
Sbjct: 730 GKLYSAVSIYDRMISSGIPRSMQTFNIMISVYGQGGKLEKAVEMFSAAQELGLPIDEKTY 789
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
+L Y G A +F ++ GI P +INAY +G +A FQ M+K
Sbjct: 790 TNMLSFYGKAGKHHEASLLFSRMKEDGIRPGKISFNTMINAYATSGLHNEAEIIFQEMQK 849
Query: 339 AGLEP-SDKCVALILSACE 356
P S +ALI + E
Sbjct: 850 NNHVPDSHTYLALIRAYTE 868
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 94/237 (39%), Gaps = 36/237 (15%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG--------- 254
D + ++V Y +A L+ A++ FE P+ Y +MV A R G
Sbjct: 611 DDTAIATLIVQYGQAQQLEQAQKLFETAST-SFPVGGSVYNAMVDALCRCGKTEEAYRLF 669
Query: 255 --MLDRGE--------VLLREMDAQEVYVGSE----------------VYKALLRGYSMN 288
++D+G +L+ + QE + +E VY ++ +
Sbjct: 670 MELIDQGHNGDAVTISILVTHLTKQEKFQEAENIIYRCLHDEAELDTVVYNTFIKSMLES 729
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G A +++ + +GI + ++I+ Y G+ +KA F ++ GL +K
Sbjct: 730 GKLYSAVSIYDRMISSGIPRSMQTFNIMISVYGQGGKLEKAVEMFSAAQELGLPIDEKTY 789
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+LS K + + A ++ DG GK + T+ + G+ E E + +E
Sbjct: 790 TNMLSFYGKAGKHHEASLLFSRMKEDGIRPGKISFNTMINAYATSGLHNEAEIIFQE 846
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 97/248 (39%), Gaps = 28/248 (11%)
Query: 184 MQIQN---AENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDK 240
M +QN A L AM+ R Q + + ++ + ++ AE+TF + G P D
Sbjct: 426 MNVQNYDRALQVLDAMRARNVKPSQFSYSALLRCHVAKEDVDAAEDTFRALSNYGPP-DV 484
Query: 241 RSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEA 300
++ Y+R G LD+ L+ +M + + ++ +L ++ + E
Sbjct: 485 FCCNDLLRLYMRLGHLDKARALILKMRKEALQFDEDLCVTVLEVCCKTSINKDTDNLTEV 544
Query: 301 IQFAG-----ITP-DARMCAL-----------------LINAYQMAGQSQKAYTAFQNMR 337
IQ G + P D+ ++ LI + G + +A ++++
Sbjct: 545 IQNEGSSSKVLNPTDSSTLSMMLKSLLDKPGGLSSVSQLIMKFAREGSTDEAKFLYEHLT 604
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
+ G +P D +A ++ + QL +A + L + F VG + R G E
Sbjct: 605 ELGAKPDDTAIATLIVQYGQAQQLEQA-QKLFETASTSFPVGGSVYNAMVDALCRCGKTE 663
Query: 398 EVEHVLRE 405
E + E
Sbjct: 664 EAYRLFME 671
>gi|302817236|ref|XP_002990294.1| hypothetical protein SELMODRAFT_131439 [Selaginella moellendorffii]
gi|300141856|gb|EFJ08563.1| hypothetical protein SELMODRAFT_131439 [Selaginella moellendorffii]
Length = 1139
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 86/175 (49%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+++ Y +I + K + ++AE +K GF D+ + M+ Y+K+G + A + F
Sbjct: 895 SLQTYDTMISVFAKSGRTRDAEKMFKDLKSAGFQPDEKVYSQMMNCYAKSGMYEHAADLF 954
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E +KL G + SY +++ AY RAG + E LL EM S + L+ Y+
Sbjct: 955 EAMKLRGLRPHEVSYNNLIDAYARAGQFAKAEQLLVEMAKAGCPPSSVTFLLLISAYAHR 1014
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G A+ E +Q A I P R ++ A+ A ++A ++ M ++G++P
Sbjct: 1015 GKCNEAENALERMQTAAIRPTVRHYNEVMLAFSRARLPRQAMESYLKMERSGIQP 1069
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 97/208 (46%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I Y II + +++ A +T ++ G T M+ +++K+G + AE+ F
Sbjct: 860 HIVAYNTIIKADLRPGRLKKAIDTYSSLTNLGLRPSLQTYDTMISVFAKSGRTRDAEKMF 919
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+++K G D++ Y M+ Y ++GM + L M + + Y L+ Y+
Sbjct: 920 KDLKSAGFQPDEKVYSQMMNCYAKSGMYEHAADLFEAMKLRGLRPHEVSYNNLIDAYARA 979
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G A+++ + AG P + LLI+AY G+ +A A + M+ A + P+ +
Sbjct: 980 GQFAKAEQLLVEMAKAGCPPSSVTFLLLISAYAHRGKCNEAENALERMQTAAIRPTVRHY 1039
Query: 349 ALILSACEKENQLNRALEFLIDLERDGF 376
++ A + +A+E + +ER G
Sbjct: 1040 NEVMLAFSRARLPRQAMESYLKMERSGI 1067
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 113/251 (45%), Gaps = 14/251 (5%)
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL 221
L+ S+ ++ Y+ ++ YG+ QI AE M + D+V + M++ Y+ A
Sbjct: 264 LQLSYIPSVIVYSMLLKVYGRDKQIGLAEAAFQEMLDQKLDPDEVAFSTMILNYANA--- 320
Query: 222 KMAEETFEEIKLLGEPLDKR-------SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
E F+E+ + E + R +Y +M++ +A L +L ++ + V +
Sbjct: 321 ----EMFDEMLTMYEAMMSRGIVPSSVTYTTMLIHLNKAERLADAALLWEDLVEESVELS 376
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
Y ++ Y G E A VFEA+ AG PD+ + ++++ G+ +A F
Sbjct: 377 PLAYALMITIYRKLGRFEEALEVFEAMLGAGYYPDSLIYNMVLHMLGKLGRYDEAVDVFT 436
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
M++ L S A +L CEK ++ A D++ V + ++ + + + G
Sbjct: 437 AMQRQELCTSKYSYATMLHICEKADKFELAASIFSDMQMKRCPVDEVVYTSVISIYGKAG 496
Query: 395 VVEEVEHVLRE 405
+ +E E + +E
Sbjct: 497 LYDEAEKLFQE 507
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/234 (19%), Positives = 106/234 (45%), Gaps = 3/234 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET---FE 229
Y+ ++ Q++ A + M++ G CD V +++++ YSKAG K+ + +
Sbjct: 791 YSSMVGALINCNQLEEAAGLVEKMRQIGLKCDSVLVSILLNAYSKAGEQKIFSFSGRWYP 850
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
+ +Y +++ A +R G L + + + + Y ++ ++ +G
Sbjct: 851 AGYCCLQHDHIVAYNTIIKADLRPGRLKKAIDTYSSLTNLGLRPSLQTYDTMISVFAKSG 910
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
+ A+++F+ ++ AG PD ++ + ++N Y +G + A F+ M+ GL P +
Sbjct: 911 RTRDAEKMFKDLKSAGFQPDEKVYSQMMNCYAKSGMYEHAADLFEAMKLRGLRPHEVSYN 970
Query: 350 LILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
++ A + Q +A + L+++ + G L + + G E E+ L
Sbjct: 971 NLIDAYARAGQFAKAEQLLVEMAKAGCPPSSVTFLLLISAYAHRGKCNEAENAL 1024
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 88/188 (46%), Gaps = 1/188 (0%)
Query: 154 LQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVV 213
L+V E A+L + + Y ++H GK + A + AM+R+ + + M+
Sbjct: 397 LEVFE-AMLGAGYYPDSLIYNMVLHMLGKLGRYDEAVDVFTAMQRQELCTSKYSYATMLH 455
Query: 214 MYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYV 273
+ KA ++A F ++++ P+D+ Y S++ Y +AG+ D E L +EM+ + V
Sbjct: 456 ICEKADKFELAASIFSDMQMKRCPVDEVVYTSVISIYGKAGLYDEAEKLFQEMNELRLLV 515
Query: 274 GSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAF 333
+ + + G A +V E + G+ D L++ Y AG ++A F
Sbjct: 516 DVKTFSVMANVRLKAGKYNEAVQVMEELLAKGLNLDDMAWKTLLHCYVKAGNVERATKTF 575
Query: 334 QNMRKAGL 341
+ + ++G+
Sbjct: 576 KTLVESGI 583
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 102/256 (39%), Gaps = 22/256 (8%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
ESF + Y ++ + K Q+ AE M+ +GF + TL ++ Y KAG ++
Sbjct: 717 ESFTLDSAAYNQLTINFLKAGQVLPAEMLHSRMQDKGFDVEDSTLGHLIAAYGKAGRYEV 776
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
E+ P + Y SMV A + L+ L+ +M + S + LL
Sbjct: 777 LTRLKPEL-----PRNNFVYSSMVGALINCNQLEEAAGLVEKMRQIGLKCDSVLVSILLN 831
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCAL----------LINAYQMAGQSQKAYTAF 333
YS G Q++F F+G A C L +I A G+ +KA +
Sbjct: 832 AYS----KAGEQKIF---SFSGRWYPAGYCCLQHDHIVAYNTIIKADLRPGRLKKAIDTY 884
Query: 334 QNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRL 393
++ GL PS + ++S K + A + DL+ GF ++ + + +
Sbjct: 885 SSLTNLGLRPSLQTYDTMISVFAKSGRTRDAEKMFKDLKSAGFQPDEKVYSQMMNCYAKS 944
Query: 394 GVVEEVEHVLREYGLR 409
G+ E + LR
Sbjct: 945 GMYEHAADLFEAMKLR 960
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 64/144 (44%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F+ + + Y+++++ Y K ++A + AMK RG +V+ ++ Y++AG AE
Sbjct: 927 FQPDEKVYSQMMNCYAKSGMYEHAADLFEAMKLRGLRPHEVSYNNLIDAYARAGQFAKAE 986
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+ E+ G P ++ ++ AY G + E L M + Y ++ +
Sbjct: 987 QLLVEMAKAGCPPSSVTFLLLISAYAHRGKCNEAENALERMQTAAIRPTVRHYNEVMLAF 1046
Query: 286 SMNGNSEGAQRVFEAIQFAGITPD 309
S A + ++ +GI PD
Sbjct: 1047 SRARLPRQAMESYLKMERSGIQPD 1070
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 75/195 (38%)
Query: 210 VMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQ 269
+M+ +Y K G + A E FE + G D Y ++ + G D + M Q
Sbjct: 382 LMITIYRKLGRFEEALEVFEAMLGAGYYPDSLIYNMVLHMLGKLGRYDEAVDVFTAMQRQ 441
Query: 270 EVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
E+ Y +L E A +F +Q D + +I+ Y AG +A
Sbjct: 442 ELCTSKYSYATMLHICEKADKFELAASIFSDMQMKRCPVDEVVYTSVISIYGKAGLYDEA 501
Query: 330 YTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAW 389
FQ M + L K +++ + K + N A++ + +L G + A TL
Sbjct: 502 EKLFQEMNELRLLVDVKTFSVMANVRLKAGKYNEAVQVMEELLAKGLNLDDMAWKTLLHC 561
Query: 390 FKRLGVVEEVEHVLR 404
+ + G VE +
Sbjct: 562 YVKAGNVERATKTFK 576
Score = 41.2 bits (95), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 91/231 (39%), Gaps = 13/231 (5%)
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL 221
L ES A++ Y ++ Y + +++A+ +K DQV MV +Y A +
Sbjct: 578 LVESGIADLMAYNDVLSLYAEFDMLEDAKLLFQQLKSSSIQPDQVWFGTMVKLYCNANMV 637
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLR---EMDAQEVYVGSEVY 278
AEE +++ G D + G ++ AY A ++ LL + D E S +Y
Sbjct: 638 AAAEEVLRQMREKGFTPDHITQGILINAYGEANRIEEAAGLLEASAKEDESEAAAISRIY 697
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
L+ + + RV E+ T D+ L + AGQ A M+
Sbjct: 698 -LCLKFRLFDKATLLLHRVLES-----FTLDSAAYNQLTINFLKAGQVLPAEMLHSRMQD 751
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF----MVGKEASCT 385
G + D + +++A K + +L R+ F MVG +C
Sbjct: 752 KGFDVEDSTLGHLIAAYGKAGRYEVLTRLKPELPRNNFVYSSMVGALINCN 802
>gi|218197431|gb|EEC79858.1| hypothetical protein OsI_21342 [Oryza sativa Indica Group]
Length = 1013
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%)
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
T +M+ +Y + G L+ A E F + LG P+D+++Y +M+ Y +AG +L M
Sbjct: 753 TFNIMISVYGQGGKLEKAVEMFSAAQELGLPIDEKTYTNMLSFYGKAGKHHEASLLFSRM 812
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
+ G + ++ Y+ +G A+ +F+ +Q PD+ LI AY
Sbjct: 813 KEDGIRPGKISFNTMINAYATSGLHNEAEIIFQEMQKNNHVPDSHTYLALIRAYTEGKCY 872
Query: 327 QKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
KA A Q M ++ + PS ++SA KE Q++ A +E G
Sbjct: 873 SKAEEAIQMMLRSNMTPSCTHFNHLISAFLKEGQIDEAQRMYNQMEEAG 921
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 105/242 (43%), Gaps = 10/242 (4%)
Query: 110 IICVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAE---LALLEESF 166
++C G L+D+L + RR D + + M L Q + L E+
Sbjct: 211 LLCAYARWGKLNDMLMFYAAV---RRRDIVPSISVFNFMVSSLQKQKLHGKVIHLWEQML 267
Query: 167 EANIR----DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
EAN+ YT +I Y K+ ++ A + MKRR F+ ++ T ++++ + +K G +
Sbjct: 268 EANVAPNQFTYTVVIGSYAKEGMLEEAMDAFGEMKRRRFVPEEATYSLLISLCAKHGKGE 327
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A ++E+K+ + S++ Y + + L EM+ ++ +Y L+
Sbjct: 328 EALGLYDEMKVKSIVPSNYTCASVLTLYYKNEDYSKALSLFSEMEQNKIVPDEVIYGILV 387
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
R Y G E AQR+FE I AG+ D + + + +A MR ++
Sbjct: 388 RIYGKLGLYEDAQRMFEEIDKAGLLSDEQTYVAMAQVHMNVQNYDRALQVLDAMRARNVK 447
Query: 343 PS 344
PS
Sbjct: 448 PS 449
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 83/177 (46%), Gaps = 1/177 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+++ + +I YG+ +++ A A + G D+ T T M+ Y KAG A F
Sbjct: 750 SMQTFNIMISVYGQGGKLEKAVEMFSAAQELGLPIDEKTYTNMLSFYGKAGKHHEASLLF 809
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+K G K S+ +M+ AY +G+ + E++ +EM S Y AL+R Y+
Sbjct: 810 SRMKEDGIRPGKISFNTMINAYATSGLHNEAEIIFQEMQKNNHVPDSHTYLALIRAYTEG 869
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
A+ + + + +TP LI+A+ GQ +A + M +AG+ P+D
Sbjct: 870 KCYSKAEEAIQMMLRSNMTPSCTHFNHLISAFLKEGQIDEAQRMYNQMEEAGI-PAD 925
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 2/178 (1%)
Query: 180 YGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLD 239
Y K A + M++ + D+V ++V +Y K G + A+ FEEI G D
Sbjct: 355 YYKNEDYSKALSLFSEMEQNKIVPDEVIYGILVRIYGKLGLYEDAQRMFEEIDKAGLLSD 414
Query: 240 KRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFE 299
+++Y +M ++ DR +L M A+ V Y ALLR + + + A+ F
Sbjct: 415 EQTYVAMAQVHMNVQNYDRALQVLDAMRARNVKPSQFSYSALLRCHVAKEDVDAAEDTFR 474
Query: 300 AIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE-PSDKCVALILSACE 356
A+ G PD C L+ Y G KA MRK L+ D CV ++ C+
Sbjct: 475 ALSNYG-PPDVFCCNDLLRLYMRLGHLDKARALILKMRKEALQFDEDLCVTVLEVCCK 531
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/297 (19%), Positives = 126/297 (42%), Gaps = 10/297 (3%)
Query: 112 CVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELAL---LEESFEA 168
C SP + ++ + +A++V + R + VL +L+ + Q + L+ +E
Sbjct: 116 CSSPSSADMREAMASFVAKLTFR--EMCFVLHELRG-----WRQARDFFAWMKLQLCYEP 168
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ YT ++ YG+ +I+ AE T L M + G D V ++ Y++ G L +
Sbjct: 169 SVVAYTILLRLYGQVGKIKLAEVTFLEMLQAGCEPDAVACGTLLCAYARWGKLNDMLMFY 228
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ + MV + + + + L +M V Y ++ Y+
Sbjct: 229 AAVRRRDIVPSISVFNFMVSSLQKQKLHGKVIHLWEQMLEANVAPNQFTYTVVIGSYAKE 288
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G E A F ++ P+ +LLI+ G+ ++A + M+ + PS+
Sbjct: 289 GMLEEAMDAFGEMKRRRFVPEEATYSLLISLCAKHGKGEEALGLYDEMKVKSIVPSNYTC 348
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
A +L+ K ++AL ++E++ + + L + +LG+ E+ + + E
Sbjct: 349 ASVLTLYYKNEDYSKALSLFSEMEQNKIVPDEVIYGILVRIYGKLGLYEDAQRMFEE 405
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 61/143 (42%)
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
+ YT ++ YGK + A MK G +++ M+ Y+ +G AE F+E
Sbjct: 787 KTYTNMLSFYGKAGKHHEASLLFSRMKEDGIRPGKISFNTMINAYATSGLHNEAEIIFQE 846
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
++ D +Y +++ AY + E ++ M + + L+ + G
Sbjct: 847 MQKNNHVPDSHTYLALIRAYTEGKCYSKAEEAIQMMLRSNMTPSCTHFNHLISAFLKEGQ 906
Query: 291 SEGAQRVFEAIQFAGITPDARMC 313
+ AQR++ ++ AGI D C
Sbjct: 907 IDEAQRMYNQMEEAGIPADLACC 929
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 80/199 (40%), Gaps = 1/199 (0%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
+ L+++ + + ++ K+ + Q AEN + D V + ++
Sbjct: 670 MELIDQGHNGDAVTISILVTHLTKQEKFQEAENIIYRCLHDEAELDTVVYNTFIKSMLES 729
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
G L A ++ + G P +++ M+ Y + G L++ + + + + Y
Sbjct: 730 GKLYSAVSIYDRMISSGIPRSMQTFNIMISVYGQGGKLEKAVEMFSAAQELGLPIDEKTY 789
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
+L Y G A +F ++ GI P +INAY +G +A FQ M+K
Sbjct: 790 TNMLSFYGKAGKHHEASLLFSRMKEDGIRPGKISFNTMINAYATSGLHNEAEIIFQEMQK 849
Query: 339 AGLEP-SDKCVALILSACE 356
P S +ALI + E
Sbjct: 850 NNHVPDSHTYLALIRAYTE 868
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 94/237 (39%), Gaps = 36/237 (15%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG--------- 254
D + ++V Y +A L+ A++ FE P+ Y +MV A R G
Sbjct: 611 DDTAIATLIVQYGQAQQLEQAQKLFETAST-SFPVGGSVYNAMVDALCRCGKTEEAYRLF 669
Query: 255 --MLDRGE--------VLLREMDAQEVYVGSE----------------VYKALLRGYSMN 288
++D+G +L+ + QE + +E VY ++ +
Sbjct: 670 MELIDQGHNGDAVTISILVTHLTKQEKFQEAENIIYRCLHDEAELDTVVYNTFIKSMLES 729
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G A +++ + +GI + ++I+ Y G+ +KA F ++ GL +K
Sbjct: 730 GKLYSAVSIYDRMISSGIPRSMQTFNIMISVYGQGGKLEKAVEMFSAAQELGLPIDEKTY 789
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+LS K + + A ++ DG GK + T+ + G+ E E + +E
Sbjct: 790 TNMLSFYGKAGKHHEASLLFSRMKEDGIRPGKISFNTMINAYATSGLHNEAEIIFQE 846
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 97/248 (39%), Gaps = 28/248 (11%)
Query: 184 MQIQN---AENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDK 240
M +QN A L AM+ R Q + + ++ + ++ AE+TF + G P D
Sbjct: 426 MNVQNYDRALQVLDAMRARNVKPSQFSYSALLRCHVAKEDVDAAEDTFRALSNYGPP-DV 484
Query: 241 RSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEA 300
++ Y+R G LD+ L+ +M + + ++ +L ++ + E
Sbjct: 485 FCCNDLLRLYMRLGHLDKARALILKMRKEALQFDEDLCVTVLEVCCKTSINKDTDNLTEV 544
Query: 301 IQFAG-----ITP-DARMCAL-----------------LINAYQMAGQSQKAYTAFQNMR 337
IQ G + P D+ ++ LI + G + +A ++++
Sbjct: 545 IQNEGSSSKVLNPTDSSTLSMMLKSLLDKPEGLSSVSQLIMKFAREGSTDEAKFLYEHLT 604
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
+ G +P D +A ++ + QL +A + L + F VG + R G E
Sbjct: 605 ELGAKPDDTAIATLIVQYGQAQQLEQA-QKLFETASTSFPVGGSVYNAMVDALCRCGKTE 663
Query: 398 EVEHVLRE 405
E + E
Sbjct: 664 EAYRLFME 671
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 102/243 (41%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E F + Y +I+GY K + A T+ M R+ D VTL ++ + L+
Sbjct: 411 ESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLE 470
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A + + G +D+ SYG++++ Y + G +DR L EM +E+ + Y ++
Sbjct: 471 EAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCII 530
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G G +E A + +G+ PD +++ Y G +KA+ M + +
Sbjct: 531 GGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFK 590
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P ++L E L +AL+ G + TL + G +++ ++
Sbjct: 591 PDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNL 650
Query: 403 LRE 405
L E
Sbjct: 651 LSE 653
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 97/229 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y +++GY K ++ A N + M + + D T +++ G ++ A +
Sbjct: 277 NRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLR 336
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E++ L D SY +++ + + LL EM + V + + +++ Y
Sbjct: 337 DEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKE 396
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A ++ +G +PD LIN Y AG +A+ M + ++ +
Sbjct: 397 GKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTL 456
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
IL +E +L A + L + G+ + + + TL + + G V+
Sbjct: 457 NTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVD 505
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/315 (20%), Positives = 123/315 (39%), Gaps = 20/315 (6%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRA-DWLAVLKQLKLMEHPL-----------YLQVAELA 160
SP L + A+V+ +P A +K+L+L + L Y ++
Sbjct: 131 TSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVS 190
Query: 161 LLEESFE--------ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMV 212
E+F N+ + +I+GY + + ++A L M + D VT ++
Sbjct: 191 FSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTIL 250
Query: 213 VMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY 272
K G L A + ++K G ++ +Y +V Y + G L ++ M +
Sbjct: 251 DTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLL 310
Query: 273 VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTA 332
Y L+ G G E A ++ + ++ + PD LIN + +A+
Sbjct: 311 PDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKL 370
Query: 333 FQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKR 392
+ M + G++P+ +++ KE +++ A + +E GF TL + +
Sbjct: 371 LEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCK 430
Query: 393 LGVVEEVEHVLREYG 407
G + E + E G
Sbjct: 431 AGNMGEAFRTMDEMG 445
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 95/243 (39%), Gaps = 35/243 (14%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y +I+G + +I A L M +G + VT +MV Y K G + A T
Sbjct: 347 DVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTI 406
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG-----------------------EVLLRE 265
+++ G D +Y +++ Y +AG + L RE
Sbjct: 407 TKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCRE 466
Query: 266 MDAQEVY------------VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
+E Y + Y L+ GY +GN + A ++++ ++ I P
Sbjct: 467 KKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTY 526
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
+I G++++A + + ++GL P + IL +E + +A +F +
Sbjct: 527 NCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVE 586
Query: 374 DGF 376
+ F
Sbjct: 587 NSF 589
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 63/149 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
LLE + Y I+HGY ++ ++ A M F D T +++ G
Sbjct: 549 LLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGV 608
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ A + F G+ +D +Y +++ + + G LD LL EM+ +E+ Y A
Sbjct: 609 LEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNA 668
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPD 309
++ + +G A+ + G PD
Sbjct: 669 IITALTDSGRIREAEEFMSKMLEKGNLPD 697
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 72/196 (36%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I GY K + A MK + I VT ++ + G + A E+
Sbjct: 491 YGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELL 550
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D+ +Y +++ Y R G +++ +M LLRG M G E
Sbjct: 551 ESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLE 610
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A ++F G D LI + G+ A+ M + L P I+
Sbjct: 611 KALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAII 670
Query: 353 SACEKENQLNRALEFL 368
+A ++ A EF+
Sbjct: 671 TALTDSGRIREAEEFM 686
>gi|26449475|dbj|BAC41864.1| unknown protein [Arabidopsis thaliana]
gi|29028966|gb|AAO64862.1| At5g25630 [Arabidopsis thaliana]
Length = 574
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 116/261 (44%), Gaps = 9/261 (3%)
Query: 92 ISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRF----MKPRRADWLAVLKQLKL 147
+S+ + TK F +I E+GN+ D + A ++ + P + + ++K +
Sbjct: 103 VSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGI 162
Query: 148 MEHP-LYLQVAELALLEESFEA--NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICD 204
P ++ +L L E + + NIR + ++ + KK +++ A + M+ G D
Sbjct: 163 AGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPD 222
Query: 205 QVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPL--DKRSYGSMVMAYVRAGMLDRGEVL 262
VT + Y + G AE E ++ E + R+ G +V Y R G + G
Sbjct: 223 TVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRF 282
Query: 263 LREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQM 322
+R M V V+ +L+ G+ + +G V ++ + D + ++NA+
Sbjct: 283 VRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSS 342
Query: 323 AGQSQKAYTAFQNMRKAGLEP 343
AG +KA F+ M KAG++P
Sbjct: 343 AGYMEKAAQVFKEMVKAGVKP 363
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 1/192 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E EAN+ + +I+G+ + M + L MK D +T + ++ +S AG ++
Sbjct: 288 EMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYME 347
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A + F+E+ G D +Y + YVRA + E LL + E ++ ++
Sbjct: 348 KAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKGPKKAEELLETLIV-ESRPNVVIFTTVI 406
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G+ NG+ + A RVF + G++P+ + L+ Y Q KA Q MR G++
Sbjct: 407 SGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVK 466
Query: 343 PSDKCVALILSA 354
P + L+ A
Sbjct: 467 PENSTFLLLAEA 478
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 116/283 (40%), Gaps = 38/283 (13%)
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA 224
F N YT +IHG+ K +++ A + M G+ D +T TVM+ K+GN + A
Sbjct: 325 GFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQA 384
Query: 225 EETFEEIKLLG-EP----------------------------------LDKRSYGSMVMA 249
++FEE+ G +P D +Y ++
Sbjct: 385 AKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDG 444
Query: 250 YVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGA-QRVFEAIQFAGITP 308
+ + G LD LL E+D ++Y +L+ G G+ E +FE + A T
Sbjct: 445 FCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETL 504
Query: 309 DARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSA-C-EKENQLNRALE 366
D +C +I G+ +A FQ M G +P ++++ C +EN++ RA
Sbjct: 505 DPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFA 564
Query: 367 FLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLR 409
L DLE+ G++ L ++G V+ +L E R
Sbjct: 565 LLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSR 607
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 105/233 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+T ++ K +++ A M++ GF D + M+ +KAG+ + A + + +
Sbjct: 228 HTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNML 287
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ +YG +V + +AG L+R E L R M A S +Y +L+ G++ +G +
Sbjct: 288 AKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMK 347
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +F+ + AG PD ++I+ +G ++A +F+ M + G +P+ I+
Sbjct: 348 EACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTII 407
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
K ++ A + + G L F +LG ++E +L E
Sbjct: 408 QGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDE 460
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 128/318 (40%), Gaps = 30/318 (9%)
Query: 71 DTSMFTWIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRF 130
D + I +G T +A F R +++ CK P+ + L+ R
Sbjct: 505 DPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCK----------PDATTYNILINGLCRS 554
Query: 131 MKPRRADWLAVLKQLKLMEH--------PLYLQVAELA-------LLEES----FEANIR 171
+ R A+L L+ + + PL + + ++ +LEE+ + A++
Sbjct: 555 RENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVV 614
Query: 172 DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEI 231
YT + G + Q+ A + M R+G D ++ K L+ A + F+E+
Sbjct: 615 AYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEM 674
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE-VYKALLRGYSMNGN 290
G+ +Y ++V A AG +D M A+ VGS +Y AL+ G+
Sbjct: 675 IGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALK 734
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
+ A ++FE + G P A A L + +G+++KA Q M G P
Sbjct: 735 VDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTA 794
Query: 351 ILSACEKENQLNRALEFL 368
IL K ++ + L+ +
Sbjct: 795 ILDGLRKSDESGKLLKLV 812
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 88/210 (41%), Gaps = 1/210 (0%)
Query: 196 MKRRGFIC-DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG 254
M GF+ D+ T MV KA +K A E F +++ G P D +Y +M+ +AG
Sbjct: 215 MMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAG 274
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
+L M A+ Y L+ G E A+ +F + +G P++ +
Sbjct: 275 HAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYT 334
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
LI+ + +G+ ++A + F M +AG P +++ K +A + ++ R
Sbjct: 335 SLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRG 394
Query: 375 GFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
G T+ ++G V +++
Sbjct: 395 GCKPNVVTYTTIIQGLSKIGRVANAFRIMK 424
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 105/249 (42%), Gaps = 5/249 (2%)
Query: 161 LLEESFEANIRDYTKIIHGY--GKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
++ E + + Y +I+G ++ +++ A L +++ G++ D VT T + + K
Sbjct: 532 MVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKI 591
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
G + A + EE G D +Y ++ G +DR L +EM Q + Y
Sbjct: 592 GEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAY 651
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
++ G E A + F+ + G P L+ A AG +A+ F++M
Sbjct: 652 CCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLA 711
Query: 339 AGLEPSDKCV--ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVV 396
G + ALI C K +++ AL+ D+ G + S +L R G
Sbjct: 712 RGELVGSVMIYDALIHGFC-KALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKT 770
Query: 397 EEVEHVLRE 405
E+ + +L+E
Sbjct: 771 EKAQELLQE 779
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/217 (19%), Positives = 90/217 (41%), Gaps = 1/217 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L+ N + +I + + + +A MKR+ D T ++V KAG
Sbjct: 145 MLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGM 204
Query: 221 LKMAEETFEEIKLLG-EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ A E F E+ +G P D+ + +MV ++A + + +M+ + Y
Sbjct: 205 DEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYN 264
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
++ G + G+++ A +V + + P +L+N+ AG ++A F+ M +
Sbjct: 265 TMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAAS 324
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
G P+ ++ K ++ A ++ G+
Sbjct: 325 GFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGY 361
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 53/127 (41%), Gaps = 1/127 (0%)
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
+ L+R ++ ++ A FE ++ PD +L++ AG +KA+ F M
Sbjct: 157 FNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMM 216
Query: 338 KAGLEPSDKCV-ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVV 396
G P D+ + ++ K ++ A E +E+ GF A T+ + G
Sbjct: 217 AMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHA 276
Query: 397 EEVEHVL 403
+E VL
Sbjct: 277 QEALKVL 283
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 107/246 (43%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
A+LE NI Y ++ + K Q+ A MKRRGF VT +++ AG
Sbjct: 160 AMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAG 219
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ A + F ++ G D +Y ++V ++G ++ + REM + V V Y
Sbjct: 220 RVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYN 279
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
+LL + GN + ++ + + G PDA +++A A + A F M ++
Sbjct: 280 SLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVES 339
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEV 399
G +P +++ + + +A + L ++ GF+ + +L W G V+E
Sbjct: 340 GCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEA 399
Query: 400 EHVLRE 405
VL E
Sbjct: 400 FAVLEE 405
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 101/234 (43%), Gaps = 4/234 (1%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVT--LTVMVVMYSKAGNLKMAEETFEEI 231
K+I YG+ + +A + L + F C T ++ + +G + AE ++++
Sbjct: 34 VKLITAYGRGNKSGDAFD--LFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKL 91
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
G LD+ +Y ++ + R+G LD + REM + Y L+ G
Sbjct: 92 VQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRV 151
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALI 351
+ A+ F+A+ G+TP+ LL++A++ GQ A F M++ G +PS ++
Sbjct: 152 QEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNIL 211
Query: 352 LSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
L A ++ A + + DG TL + G VEE V RE
Sbjct: 212 LDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFRE 265
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 94/220 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ ++ +Y ++ K + + M R+GF D + ++ KA
Sbjct: 266 MVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANK 325
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A E F + G D SY ++ +Y R G + +L EM ++ Y +
Sbjct: 326 PDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNS 385
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ + +G + A V E ++ AG PD L++ G++Q+A FQ M+ G
Sbjct: 386 LIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKG 445
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGK 380
+EP A+ + +++L+ AL D++ G V K
Sbjct: 446 VEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDK 485
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 78/170 (45%)
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
TL ++ Y + A + F + + ++ ++ V +G +R E++ +++
Sbjct: 32 TLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKL 91
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
+ + Y L+R + +G + A +F ++ G PD L+NA AG+
Sbjct: 92 VQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRV 151
Query: 327 QKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
Q+A + F M + GL P+ L++ A K QL+ AL +++R GF
Sbjct: 152 QEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGF 201
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 89/233 (38%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +++ GK ++Q A + AM RG + T +++ + K G L MA F E+K
Sbjct: 138 YGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMK 197
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G +Y ++ A AG + L +M S Y L+ G +G E
Sbjct: 198 RRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVE 257
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +VF + G+ D L+ AG + + + M + G P I+
Sbjct: 258 EAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIM 317
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
A K N+ + A E + G + L + R G + +L E
Sbjct: 318 DALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEE 370
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 87/212 (41%), Gaps = 8/212 (3%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ F + + I+ GK + A M G D ++ +++ Y++ G+
Sbjct: 304 KGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQ 363
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A + EE+ G + ++Y S++ G +D +L EM+ Y L+
Sbjct: 364 ARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMD 423
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G ++ A R+F+ ++ G+ PD A+ I+ + +A F++M+ G P
Sbjct: 424 MLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGC-P 482
Query: 344 SDKCVALIL-------SACEKENQLNRALEFL 368
DK + IL E E QL +F+
Sbjct: 483 VDKAMYRILIRAAHRAGDTELEAQLKHESQFM 514
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 55/132 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E F + Y +IH Q+ A L M+ G D VT ++ M K G
Sbjct: 371 MVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGE 430
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A F+++K G D SY + LD VL ++M A V +Y+
Sbjct: 431 NQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRI 490
Query: 281 LLRGYSMNGNSE 292
L+R G++E
Sbjct: 491 LIRAAHRAGDTE 502
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 99/239 (41%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
AN+ Y +I+GY K + A M R+ + VT ++ G L+ A
Sbjct: 348 ANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISL 407
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
F E+ G+ D +Y ++ + LD+ LL+ ++ ++Y +L G
Sbjct: 408 FHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCR 467
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G E A+ +F + G+ P+ ++I+ G +A F M K G P+D
Sbjct: 468 AGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCT 527
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREY 406
LI + N+ R +E L ++ GF V + L G+ + V+ +L +Y
Sbjct: 528 YNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKY 586
>gi|224138602|ref|XP_002322855.1| predicted protein [Populus trichocarpa]
gi|222867485|gb|EEF04616.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 100/199 (50%), Gaps = 8/199 (4%)
Query: 146 KLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMK----RRGF 201
KL+ + + + +E LL + F + R +T ++ GY K+ ++ + L AM+ +G
Sbjct: 363 KLLPNLVEVSNSEPPLLPKVFAPDSRIFTTLMKGYMKQGRVTDTVRMLEAMRCQDDSKG- 421
Query: 202 ICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEV 261
D +T T ++ KAG++ A + E+ +G P ++ +Y ++ Y + +D+ +
Sbjct: 422 QPDHITYTTVISALVKAGSMDPARQVLAEMTRIGVPANRITYNILLKGYCQQLQIDKAKE 481
Query: 262 LLREMDAQEVYVGSEV--YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
LL+EM A +V + +V Y L+ G + +S GA F ++ GI P L+ A
Sbjct: 482 LLKEM-ADDVNIEPDVVSYNTLIDGCILVDDSAGALAFFNEMRTKGIMPTKISYTTLMKA 540
Query: 320 YQMAGQSQKAYTAFQNMRK 338
+ ++GQ + A F M K
Sbjct: 541 FALSGQPKLANKVFDEMLK 559
Score = 41.2 bits (95), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 93/242 (38%), Gaps = 39/242 (16%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS----------- 216
AN Y ++ GY +++QI A+ L M D V + VV Y+
Sbjct: 458 ANRITYNILLKGYCQQLQIDKAKELLKEM------ADDVNIEPDVVSYNTLIDGCILVDD 511
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM-DAQEVYVGS 275
AG L F E++ G K SY +++ A+ +G + EM V
Sbjct: 512 SAGALAF----FNEMRTKGIMPTKISYTTLMKAFALSGQPKLANKVFDEMLKDPRVKADL 567
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
+ LL GY G + A+ V + ++ G PD L N +A + +A ++
Sbjct: 568 VAWNMLLEGYCRLGLVDEAKTVIQRMKENGFHPDVATYGSLANGISLARKPGEALLLWKE 627
Query: 336 MRK-----------------AGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMV 378
+++ L+P ++ +A + C + +ALE + +E +G
Sbjct: 628 VKERWEVKGEGESSNSDSPLLPLKPDEELLATLADICVRAAFFQKALEIVACMEENGIPP 687
Query: 379 GK 380
K
Sbjct: 688 NK 689
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 95/217 (43%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+L + + N+ Y +I+GY K +I A M+ +G VT ++ ++G
Sbjct: 311 SLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSG 370
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A++ F E++ G+ L +Y ++ + G L+ L + + E EV+
Sbjct: 371 RVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFS 430
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
LL G G E A + F+ I G+ PD +LIN G +A M +
Sbjct: 431 ILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEK 490
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
G P +I+ KEN+++ A++ L ++ F
Sbjct: 491 GCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNF 527
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 99/209 (47%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E +I Y +++G Q+++A ++ RG + + +++ Y K + A
Sbjct: 283 EPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFR 342
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
FEE++ G +Y +++ A ++G + + L EM ++ Y LL G
Sbjct: 343 LFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLC 402
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
NG+ E A +F++I+ P+ + ++L++ AG+ ++A+ F + K GLEP
Sbjct: 403 KNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTI 462
Query: 347 CVALILSACEKENQLNRALEFLIDLERDG 375
++++ + L+ A++ L +E G
Sbjct: 463 AYNILINGLCNKGMLSEAVKLLWQMEEKG 491
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 96/233 (41%), Gaps = 4/233 (1%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
A++ Y +IHG + + L M RGF D T T+++ K G + A++
Sbjct: 214 ADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQI 273
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
E + G+ D +Y +++ G L+ L + + + + Y L+ GY
Sbjct: 274 LELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCK 333
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG--LEPSD 345
+ + A R+FE ++ G+ P LI A +G+ + A F M+ G L+ S
Sbjct: 334 DQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLST 393
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
CV +L K L A++ +++ E L R G +EE
Sbjct: 394 YCV--LLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEE 444
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 95/216 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ F + +T +I G K+ ++ A+ L M +G D +T ++ G
Sbjct: 242 MVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQ 301
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ A + FE + G L+ SY ++ Y + +D L EM + + + Y
Sbjct: 302 LEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNT 361
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ +G AQ++F +Q G +L++ G ++A FQ+++K
Sbjct: 362 LIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTE 421
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+P+ + +++L + +L A + ++ ++G
Sbjct: 422 HKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGL 457
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 84/208 (40%), Gaps = 3/208 (1%)
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL 221
L+ FE + T ++ G + I +A M +G D T +++ KA
Sbjct: 69 LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKT 128
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
+A + E++K + D +YG ++ + + GM + EM + VY +L
Sbjct: 129 GLAIKLHEKMKGNCKG-DVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSL 187
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN-MRKAG 340
+ G G + A F+ ++ GI+ D LI+ AG K T F N M G
Sbjct: 188 MDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGL-WKEVTWFLNLMVDRG 246
Query: 341 LEPSDKCVALILSACEKENQLNRALEFL 368
P +++ KE ++ A + L
Sbjct: 247 FSPDAFTFTILIDGLCKEGKVGEAQQIL 274
>gi|297792331|ref|XP_002864050.1| EMB1006 [Arabidopsis lyrata subsp. lyrata]
gi|297309885|gb|EFH40309.1| EMB1006 [Arabidopsis lyrata subsp. lyrata]
Length = 723
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 98/213 (46%), Gaps = 1/213 (0%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M+++G + + ++ Y+K+ +++ E F EIK G +Y ++ AY R
Sbjct: 370 MEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFAEIKAKGLKPTAATYNILMDAYARRMQ 429
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN-SEGAQRVFEAIQFAGITPDARMCA 314
D E LLREM+ + + + L+ Y S+ A F ++ G+ P +
Sbjct: 430 PDIVETLLREMEDLGLEPNVKSFTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYT 489
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
LI+AY ++G +KAY +F+ M G++PS + +L A + + +E + R+
Sbjct: 490 ALIHAYSVSGWHEKAYASFEEMWMEGIKPSVETYTSLLDAFRRSGDTEKLMEIWKLMLRE 549
Query: 375 GFMVGKEASCTLAAWFKRLGVVEEVEHVLREYG 407
+ TL F + G+ E V+ E+G
Sbjct: 550 KIKGTRITYNTLLDGFAKQGLYIEARDVVSEFG 582
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 94/210 (44%), Gaps = 8/210 (3%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG-NLKMAEET 227
++R Y I G + +A AM + D VT +M+ KAG + K E
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAMNKINVFPDNVTCAIMITTMRKAGRSAKEVWEI 331
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
FE++ G + +G +V ++ G+ + V+ EM+ + + + VY L+ Y+
Sbjct: 332 FEKMSDKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNK 391
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
+ + E + +F I+ G+ P A +L++AY Q T + M GLEP+ K
Sbjct: 392 SNHIEEVEGLFAEIKAKGLKPTAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKS 451
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFM 377
++SA + +++ D+ D F+
Sbjct: 452 FTCLISAYGRTKKMS-------DMAADAFL 474
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 110/254 (43%), Gaps = 19/254 (7%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRD 172
+ P + L+ A+ R M+P + L L+ ME +L L E N++
Sbjct: 410 LKPTAATYNILMDAYARRMQPDIVETL-----LREME--------DLGL-----EPNVKS 451
Query: 173 YTKIIHGYGKKMQIQN-AENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEI 231
+T +I YG+ ++ + A + L MK+ G + T ++ YS +G + A +FEE+
Sbjct: 452 FTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEM 511
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
+ G +Y S++ A+ R+G ++ + + M +++ Y LL G++ G
Sbjct: 512 WMEGIKPSVETYTSLLDAFRRSGDTEKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLY 571
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALI 351
A+ V G+ P +L+NAY GQ K + M L+P + +
Sbjct: 572 IEARDVVSEFGKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTM 631
Query: 352 LSACEKENQLNRAL 365
+ A + RA
Sbjct: 632 IYAFVRVRDFKRAF 645
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 116/258 (44%), Gaps = 8/258 (3%)
Query: 123 LLAAWVRFMKPRRADWLAVL----KQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIH 178
LL R +KP + A + K K+ E Y +L+ N YT +I+
Sbjct: 531 LLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFD----EMLDHGLMPNNPLYTVLIN 586
Query: 179 GYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPL 238
G+ K + A + + G + D T + + K G ++ A + F E+K G
Sbjct: 587 GHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVP 646
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
D +Y S++ + + G +++ L EM + + +Y AL+ G +G+ + A+++F
Sbjct: 647 DVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLF 706
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
+ + G+ PD+ + +I+ Y + +A++ F M G++P ++ C KE
Sbjct: 707 DGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKE 766
Query: 359 NQLNRALEFLIDLERDGF 376
+ +A+ ++ + GF
Sbjct: 767 GDMEKAMNLFREMLQKGF 784
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I Y II K +++ A LL ++ RG D VT ++ YSK G + A + F
Sbjct: 507 DIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYF 566
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+ G + Y ++ + +AG L + R + A V + A + G N
Sbjct: 567 DEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKN 626
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A +VF ++ G+ PD + LI+ + G+ +KA+ M G+ P+
Sbjct: 627 GRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIY 686
Query: 349 ALILSACEKENQLNRA 364
++ K + RA
Sbjct: 687 NALVDGLCKSGDIQRA 702
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 98/216 (45%), Gaps = 3/216 (1%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKL 233
+ +I G+ ++ I M G + +T V++ K G ++ A E + +
Sbjct: 337 SALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVT 396
Query: 234 LGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEG 293
LG + R++ ++ Y R + R LL EM+ + + + Y A++ G +
Sbjct: 397 LGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSL 456
Query: 294 AQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILS 353
A ++ E + F+G+ P+ + ++LI AY G+ ++A M +G+ P C I+S
Sbjct: 457 ANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIIS 516
Query: 354 ACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAW 389
K ++ A +L++++ G K + T A+
Sbjct: 517 CLSKAGKMEEASTYLLEIQGRGL---KPDAVTFGAF 549
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 99/253 (39%), Gaps = 6/253 (2%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N R + +I GY ++ + A L M++R + V+ M+ +L +A +
Sbjct: 402 NSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLL 461
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++ G + Y ++MAY G ++ LL M V Y A++ S
Sbjct: 462 EKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKA 521
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G E A IQ G+ PDA I Y G+ +A F M GL P++
Sbjct: 522 GKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLY 581
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV---LRE 405
++++ K L AL L G + + + G V+E V L+E
Sbjct: 582 TVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKE 641
Query: 406 YGLRE---TYSKI 415
GL TYS +
Sbjct: 642 KGLVPDVFTYSSL 654
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 110/255 (43%), Gaps = 4/255 (1%)
Query: 159 LALLEESFEANIR----DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
L LL+E + N+ Y +I+G + A L M G + V +++++
Sbjct: 423 LELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMA 482
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
Y+ G ++ A + + G D Y +++ +AG ++ L E+ + +
Sbjct: 483 YASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPD 542
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+ + A + GYS G A + F+ + G+ P+ + +LIN + AG +A + F+
Sbjct: 543 AVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFR 602
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
+ G+ P + + + K ++ AL+ +L+ G + +L + F + G
Sbjct: 603 RLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQG 662
Query: 395 VVEEVEHVLREYGLR 409
VE+ + E L+
Sbjct: 663 EVEKAFELHDEMCLK 677
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 89/233 (38%), Gaps = 34/233 (14%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
NI Y ++ G K IQ A M +G D VT + M+ Y K+ N+ A F
Sbjct: 682 NIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLF 741
Query: 229 EEI-----------------------------KLLGEPLDKR-----SYGSMVMAYVRAG 254
E+ L E L K S+ +++ Y ++
Sbjct: 742 HEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSC 801
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
+ L +EM A+++ Y ++ + G E A +F+ +Q + D
Sbjct: 802 KIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYT 861
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
L+ Y GQS + + F+ M G++P + L++ A KE+ L A +
Sbjct: 862 SLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKL 914
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 75/171 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I + K +++ A M+ R I D VT T ++ Y+K G FE++
Sbjct: 825 YTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMV 884
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D+ +YG ++ A+ + L L E+ + + ++ L+ +
Sbjct: 885 AKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLT 944
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
A ++ + + G+ P C L+ ++ AG+ +A F+ ++ GL P
Sbjct: 945 EASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVP 995
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/255 (18%), Positives = 111/255 (43%), Gaps = 6/255 (2%)
Query: 125 AAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAEL------ALLEESFEANIRDYTKIIH 178
AA V F+ + +++++ L++ L + EL +L+ ++ YT ++
Sbjct: 177 AANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVG 236
Query: 179 GYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPL 238
K ++ A+ L+ M +G ++ ++++ + G++ A E + G
Sbjct: 237 ALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVP 296
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
+ +Y + RA ++ ++ EM + AL+ G+ G+ + R+
Sbjct: 297 NTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIK 356
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
+ + GI + +LI+ G+ +KA + M G +P+ + L++ +E
Sbjct: 357 DVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCRE 416
Query: 359 NQLNRALEFLIDLER 373
+ + RALE L ++E+
Sbjct: 417 HNMGRALELLDEMEK 431
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 87/206 (42%), Gaps = 11/206 (5%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L++ F A + +I GY K +IQ A M + + D VT T ++ + KAG
Sbjct: 779 MLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGK 837
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ A F+E++ +D +Y S++ Y + G L +M A+ V Y
Sbjct: 838 MEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGL 897
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ + N A ++ + + G+ + LLI A +A M + G
Sbjct: 898 VIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELG 957
Query: 341 LEPSDKCVALILSACEKENQLNRALE 366
L+PS L+AC N L R+
Sbjct: 958 LKPS-------LAAC---NTLVRSFH 973
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 63/157 (40%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +++GY K Q M +G D+VT +++ + K NL A + +E+
Sbjct: 860 YTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVV 919
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + ++ A + L LL EM + L+R + G +
Sbjct: 920 GKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMD 979
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
A RVFE ++ G+ PD L+N S+ A
Sbjct: 980 EATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDA 1016
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 108/280 (38%), Gaps = 39/280 (13%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E+ N Y+ +I G + I A +M +G + + T T++ +A +
Sbjct: 256 EKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMN 315
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A+ TFEE++ G D + +++ ++R G +D + M + + + Y L+
Sbjct: 316 EAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLI 375
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAY----------QMAGQSQK---- 328
G G E A + + + G P++R LLI Y ++ + +K
Sbjct: 376 HGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLV 435
Query: 329 ----AYTAFQN-----------------MRKAGLEPSDKCVALILSACEKENQLNRALEF 367
+Y A N M +GL+P+ ++++ A E ++ A
Sbjct: 436 PSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRL 495
Query: 368 LIDLERDGFMVGKEASC--TLAAWFKRLGVVEEVEHVLRE 405
L + G V + C + + + G +EE L E
Sbjct: 496 LDGMSCSG--VAPDIFCYNAIISCLSKAGKMEEASTYLLE 533
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/180 (19%), Positives = 74/180 (41%), Gaps = 1/180 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+ +I Y + + A N K + + ++ K G +++ + + +
Sbjct: 161 FDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNGML 220
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
D +Y +V A + G L + +L EMD + + +Y ++ G G+ +
Sbjct: 221 DAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDID 280
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS-DKCVALI 351
A + ++ G+ P+ ++ A + +A F+ M+K GL+P + C ALI
Sbjct: 281 EAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALI 340
>gi|168047776|ref|XP_001776345.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672305|gb|EDQ58844.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 503
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 104/234 (44%), Gaps = 3/234 (1%)
Query: 163 EESFEANIRDYTKIIHGY---GKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
E + N+ Y +I GY K Q AE + M+ G D VT T+++ Y G
Sbjct: 237 ERGIQPNVGTYNALITGYLEAKPKRQFVVAEGLIEEMEASGLYPDVVTFTMLLGAYGHEG 296
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ AE+ F +K G + SY +++ AY ++ + Q V E Y
Sbjct: 297 LTEQAEQVFNRMKARGVQPNSYSYTALINAYAERRCPEKAARAFEMIRKQGVNPTVETYT 356
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
ALL Y G+ E Q V+++++ G +++A+Q G+ ++A + +
Sbjct: 357 ALLDAYRRAGDLEMVQAVWKSMKVEGCVATRVTYMTILDAFQKQGRYKEARDLIEEFKNQ 416
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRL 393
G +P ++L++ + + +A + L++++ GF+ CTL F R+
Sbjct: 417 GHKPDLMVYNMLLNSYMRGGRHVKASDILLEMKTAGFLPDSFTYCTLIYGFLRV 470
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 96/210 (45%), Gaps = 3/210 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG---NLKMAE 225
N+ Y +I YG+ Q++ AE + M+ RG + T ++ Y +A +AE
Sbjct: 208 NVVIYNILIDAYGRVGQLEEAEGLMTEMRERGIQPNVGTYNALITGYLEAKPKRQFVVAE 267
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
EE++ G D ++ ++ AY G+ ++ E + M A+ V S Y AL+ Y
Sbjct: 268 GLIEEMEASGLYPDVVTFTMLLGAYGHEGLTEQAEQVFNRMKARGVQPNSYSYTALINAY 327
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
+ E A R FE I+ G+ P L++AY+ AG + +++M+ G +
Sbjct: 328 AERRCPEKAARAFEMIRKQGVNPTVETYTALLDAYRRAGDLEMVQAVWKSMKVEGCVATR 387
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDG 375
IL A +K+ + A + + + + G
Sbjct: 388 VTYMTILDAFQKQGRYKEARDLIEEFKNQG 417
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 94/204 (46%), Gaps = 3/204 (1%)
Query: 206 VTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG---MLDRGEVL 262
V +++ Y + G L+ AE E++ G + +Y +++ Y+ A E L
Sbjct: 210 VIYNILIDAYGRVGQLEEAEGLMTEMRERGIQPNVGTYNALITGYLEAKPKRQFVVAEGL 269
Query: 263 LREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQM 322
+ EM+A +Y + LL Y G +E A++VF ++ G+ P++ LINAY
Sbjct: 270 IEEMEASGLYPDVVTFTMLLGAYGHEGLTEQAEQVFNRMKARGVQPNSYSYTALINAYAE 329
Query: 323 AGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEA 382
+KA AF+ +RK G+ P+ + +L A + L ++ +G + +
Sbjct: 330 RRCPEKAARAFEMIRKQGVNPTVETYTALLDAYRRAGDLEMVQAVWKSMKVEGCVATRVT 389
Query: 383 SCTLAAWFKRLGVVEEVEHVLREY 406
T+ F++ G +E ++ E+
Sbjct: 390 YMTILDAFQKQGRYKEARDLIEEF 413
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 105/259 (40%), Gaps = 23/259 (8%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEE----SFEA 168
+ P G + L+ ++ KP+R VAE L+EE
Sbjct: 240 IQPNVGTYNALITGYLE-AKPKRQ-----------------FVVAE-GLIEEMEASGLYP 280
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ +T ++ YG + + AE MK RG + + T ++ Y++ + A F
Sbjct: 281 DVVTFTMLLGAYGHEGLTEQAEQVFNRMKARGVQPNSYSYTALINAYAERRCPEKAARAF 340
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E I+ G +Y +++ AY RAG L+ + + + M + Y +L +
Sbjct: 341 EMIRKQGVNPTVETYTALLDAYRRAGDLEMVQAVWKSMKVEGCVATRVTYMTILDAFQKQ 400
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A+ + E + G PD + +L+N+Y G+ KA M+ AG P
Sbjct: 401 GRYKEARDLIEEFKNQGHKPDLMVYNMLLNSYMRGGRHVKASDILLEMKTAGFLPDSFTY 460
Query: 349 ALILSACEKENQLNRALEF 367
++ + +AL++
Sbjct: 461 CTLIYGFLRVRDQTKALKY 479
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 89/210 (42%), Gaps = 3/210 (1%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M +RG + + AG LK A E++ L P + Y ++ AY R G
Sbjct: 165 MVQRGISPSVSVFGTFIKAFCDAGRLKEALLITTEMEKLNVPFNVVIYNILIDAYGRVGQ 224
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEG---AQRVFEAIQFAGITPDARM 312
L+ E L+ EM + + Y AL+ GY A+ + E ++ +G+ PD
Sbjct: 225 LEEAEGLMTEMRERGIQPNVGTYNALITGYLEAKPKRQFVVAEGLIEEMEASGLYPDVVT 284
Query: 313 CALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLE 372
+L+ AY G +++A F M+ G++P+ +++A + +A +
Sbjct: 285 FTMLLGAYGHEGLTEQAEQVFNRMKARGVQPNSYSYTALINAYAERRCPEKAARAFEMIR 344
Query: 373 RDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
+ G E L ++R G +E V+ V
Sbjct: 345 KQGVNPTVETYTALLDAYRRAGDLEMVQAV 374
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 76/183 (41%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
+ N YT +I+ Y ++ + A ++++G T T ++ Y +AG+L+M +
Sbjct: 314 QPNSYSYTALINAYAERRCPEKAARAFEMIRKQGVNPTVETYTALLDAYRRAGDLEMVQA 373
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
++ +K+ G + +Y +++ A+ + G L+ E Q VY LL Y
Sbjct: 374 VWKSMKVEGCVATRVTYMTILDAFQKQGRYKEARDLIEEFKNQGHKPDLMVYNMLLNSYM 433
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G A + ++ AG PD+ LI + KA + M G P K
Sbjct: 434 RGGRHVKASDILLEMKTAGFLPDSFTYCTLIYGFLRVRDQTKALKYHREMMNRGQLPDPK 493
Query: 347 CVA 349
A
Sbjct: 494 TYA 496
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 62/154 (40%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
++ + YT ++ Y + ++ + +MK G + +VT ++ + K G K
Sbjct: 345 KQGVNPTVETYTALLDAYRRAGDLEMVQAVWKSMKVEGCVATRVTYMTILDAFQKQGRYK 404
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A + EE K G D Y ++ +Y+R G + +L EM S Y L+
Sbjct: 405 EARDLIEEFKNQGHKPDLMVYNMLLNSYMRGGRHVKASDILLEMKTAGFLPDSFTYCTLI 464
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALL 316
G+ + A + + G PD + A L
Sbjct: 465 YGFLRVRDQTKALKYHREMMNRGQLPDPKTYAKL 498
>gi|410110071|gb|AFV61115.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
macrostachya]
Length = 437
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 102/214 (47%), Gaps = 4/214 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L A F
Sbjct: 221 NVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLF 280
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++++ G +D+ Y +M++AY RAG++ + LL E+ + + + + +L G
Sbjct: 281 QKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKSPD-NIPRDTAIHILAG---A 336
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G E A VF AG D + +I+ + + F MR G P +
Sbjct: 337 GRIEEATYVFRQAIDAGEVKDIMVFERMIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVI 396
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEA 382
AL+L+A K ++ ++A ++++ G + E
Sbjct: 397 ALVLNAYGKLHEFDKANGVYMEMQEVGCVFSDEV 430
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + M+ G + + + + ++ MY + A
Sbjct: 78 FTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENKKFLEAL 137
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 138 SVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 197
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + ++ Y + +KA Q M+ G+E
Sbjct: 198 ---GDAELFGEAIHLFXLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIE 254
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 255 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRL 314
Query: 403 LRE 405
L E
Sbjct: 315 LHE 317
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 100/237 (42%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 116 NTASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 175
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L M + + Y +++ Y
Sbjct: 176 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFXLMQRKNIVQNVVTYNSMMMIYGKT 235
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G+E
Sbjct: 236 LEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLY 295
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+ + A LA G +EE +V R+
Sbjct: 296 QTMIVAYERAGLVAHAKRLLHELKSPDNIPRDTAIHILAG----AGRIEEATYVFRQ 348
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ A + L M++ D V + ++ + K + A F +K
Sbjct: 15 YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 74
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +M+ + +A + L+ EM V + Y LL Y N
Sbjct: 75 RSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENKKFL 134
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF ++ D C ++I+ Y G +++A F MRK G+EP+
Sbjct: 135 EALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 186
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/172 (18%), Positives = 76/172 (44%), Gaps = 2/172 (1%)
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
D+ +Y +++ + + G+ D L++M+ V +Y L+ + A +F
Sbjct: 11 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 70
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
++ +G TPD +IN + A ++A + MR AG+ P+ + +L+ +
Sbjct: 71 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVEN 130
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRE 410
+ AL ++ ++ + + +LG+ +E + + +G+R+
Sbjct: 131 KKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF--WGMRK 180
>gi|242032435|ref|XP_002463612.1| hypothetical protein SORBIDRAFT_01g002930 [Sorghum bicolor]
gi|241917466|gb|EER90610.1| hypothetical protein SORBIDRAFT_01g002930 [Sorghum bicolor]
Length = 638
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 97/234 (41%), Gaps = 1/234 (0%)
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA 224
S ++ Y ++ + +E L M G D V+ +V ++ AGNL
Sbjct: 16 SVRPDLTTYNTLLAAAAVRSLADQSEMLLRTMLEAGVSPDTVSYRYIVDAFASAGNLSRV 75
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
E F E+ ++G D +Y ++ A+ R G +LR+M A + Y+ LL
Sbjct: 76 AELFSEMAVMGNTADASAYLGLMEAHTRVGATAEAVAVLRQMQADGCAPTAATYRVLLDL 135
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
Y G +G + +F ++ A + PD +L Y G ++ F +M + G+EP
Sbjct: 136 YGRQGRFDGVRELFREMRTA-VPPDTATYNVLFRVYGDGGFFKEVVELFHDMLETGVEPD 194
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
+++AC + A E L + R+G + +A L + EE
Sbjct: 195 MVTCENVMAACGRGGLHEDAREVLEYMTREGMVPTADAYTGLVEALGHAAMYEE 248
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 89/220 (40%), Gaps = 3/220 (1%)
Query: 152 LYLQVAEL--ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLT 209
+ +V EL +LE E ++ ++ G+ ++A L M R G + T
Sbjct: 175 FFKEVVELFHDMLETGVEPDMVTCENVMAACGRGGLHEDAREVLEYMTREGMVPTADAYT 234
Query: 210 VMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQ 269
+V A + A F + +G +Y ++ AY R G+ E + M
Sbjct: 235 GLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETYNTLAFAYARGGLFQEAEAIFSRMSNN 294
Query: 270 E-VYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
+ + + AL+ Y + A + + ++ + PD R ++NAY +AG +
Sbjct: 295 AGIQKNKDSFDALIEAYCQGAQLDDAVKAYMEMRKSRFNPDERSLEGVLNAYCIAGVIDE 354
Query: 329 AYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFL 368
+ F+ ++ + PS ++LS + ++ A + L
Sbjct: 355 SKEQFEELQSSVTLPSIIAYCMMLSLYARNDRWADAYDML 394
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 66/183 (36%), Gaps = 1/183 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y + YG + M G D VT ++ + G + A E E +
Sbjct: 163 YNVLFRVYGDGGFFKEVVELFHDMLETGVEPDMVTCENVMAACGRGGLHEDAREVLEYMT 222
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G +Y +V A A M + V M E Y L Y+ G +
Sbjct: 223 REGMVPTADAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETYNTLAFAYARGGLFQ 282
Query: 293 GAQRVFEAI-QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALI 351
A+ +F + AGI + LI AY Q A A+ MRK+ P ++ + +
Sbjct: 283 EAEAIFSRMSNNAGIQKNKDSFDALIEAYCQGAQLDDAVKAYMEMRKSRFNPDERSLEGV 342
Query: 352 LSA 354
L+A
Sbjct: 343 LNA 345
>gi|302819136|ref|XP_002991239.1| hypothetical protein SELMODRAFT_448344 [Selaginella moellendorffii]
gi|300140950|gb|EFJ07667.1| hypothetical protein SELMODRAFT_448344 [Selaginella moellendorffii]
Length = 561
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 117/257 (45%), Gaps = 12/257 (4%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
++ ++AEL ++ ANI YT I GYG++ AE + G T M
Sbjct: 176 IFQRMAELGVV-----ANIEMYTLQIEGYGRRRSFDKAEAVFQRLLTTGPSPTAQTYQTM 230
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPL---DKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
+ YS+AG L + F+ + P D R Y M+ Y + G +++ + + M
Sbjct: 231 MKSYSEAGRLDDVQRIFKLVTDSPSPTVKPDARMYNLMIHTYGKQGKVEQAMSVYQSMKR 290
Query: 269 QEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
+ V + + +LL + + A+ VF +Q A + PD L+NAY A +++
Sbjct: 291 ERVALTIVTFNSLL---ACQKTWKDAEDVFRKLQAAKLDPDVFSYTALVNAYAKARRAEC 347
Query: 329 AYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAA 388
A+ AF +M AG+ P+ +++A K A L ++++G E+ +L +
Sbjct: 348 AHAAFDDMIAAGIRPTQVAYNALINAYAKCKDPEGARAVLKQMKQNGCTPTVESYTSLIS 407
Query: 389 WFKRLGVVEEVEH-VLR 404
+ + ++ + E VLR
Sbjct: 408 AYVSVNLMAKAEQTVLR 424
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 88/204 (43%), Gaps = 2/204 (0%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
+ ++ YT +++ Y K + + A M G QV ++ Y+K + + A
Sbjct: 325 LDPDVFSYTALVNAYAKARRAECAHAAFDDMIAAGIRPTQVAYNALINAYAKCKDPEGAR 384
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+++K G SY S++ AYV ++ + E + M ++ + + L+ GY
Sbjct: 385 AVLKQMKQNGCTPTVESYTSLISAYVSVNLMAKAEQTVLRMKEADLQPNLQTFCVLMTGY 444
Query: 286 SMNGNS-EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
+ NGN + R FE ++ AG+ P+ + +L+NAY A ++ M G +P
Sbjct: 445 A-NGNKLDNMMRSFETMKLAGLEPNRHVYTVLVNAYGSNDDFDSAIIWYKQMLGTGYKPD 503
Query: 345 DKCVALILSACEKENQLNRALEFL 368
++L + Q E L
Sbjct: 504 PILRTVLLKIAKSHEQTEEIHELL 527
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 96/203 (47%), Gaps = 7/203 (3%)
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVV--MYSKAGNLK 222
+ + + R Y +IH YGK+ +++ A + +MKR ++V LT++ + + K
Sbjct: 257 TVKPDARMYNLMIHTYGKQGKVEQAMSVYQSMKR-----ERVALTIVTFNSLLACQKTWK 311
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
AE+ F +++ D SY ++V AY +A + +M A + Y AL+
Sbjct: 312 DAEDVFRKLQAAKLDPDVFSYTALVNAYAKARRAECAHAAFDDMIAAGIRPTQVAYNALI 371
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
Y+ + EGA+ V + ++ G TP LI+AY KA M++A L+
Sbjct: 372 NAYAKCKDPEGARAVLKQMKQNGCTPTVESYTSLISAYVSVNLMAKAEQTVLRMKEADLQ 431
Query: 343 PSDKCVALILSACEKENQLNRAL 365
P+ + ++++ N+L+ +
Sbjct: 432 PNLQTFCVLMTGYANGNKLDNMM 454
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 72/146 (49%), Gaps = 3/146 (2%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M++ + +Q ++++ Y K G + E F+ + LG + Y + Y R
Sbjct: 145 MEQGWYNFNQKDYFLVLLAYCKDGQVDKTEGIFQRMAELGVVANIEMYTLQIEGYGRRRS 204
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFA---GITPDARM 312
D+ E + + + ++ Y+ +++ YS G + QR+F+ + + + PDARM
Sbjct: 205 FDKAEAVFQRLLTTGPSPTAQTYQTMMKSYSEAGRLDDVQRIFKLVTDSPSPTVKPDARM 264
Query: 313 CALLINAYQMAGQSQKAYTAFQNMRK 338
L+I+ Y G+ ++A + +Q+M++
Sbjct: 265 YNLMIHTYGKQGKVEQAMSVYQSMKR 290
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/140 (19%), Positives = 67/140 (47%), Gaps = 3/140 (2%)
Query: 238 LDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRV 297
+++ Y +++AY + G +D+ E + + M V E+Y + GY + + A+ V
Sbjct: 152 FNQKDYFLVLLAYCKDGQVDKTEGIFQRMAELGVVANIEMYTLQIEGYGRRRSFDKAEAV 211
Query: 298 FEAIQFAGITPDARMCALLINAYQMAGQ---SQKAYTAFQNMRKAGLEPSDKCVALILSA 354
F+ + G +P A+ ++ +Y AG+ Q+ + + ++P + L++
Sbjct: 212 FQRLLTTGPSPTAQTYQTMMKSYSEAGRLDDVQRIFKLVTDSPSPTVKPDARMYNLMIHT 271
Query: 355 CEKENQLNRALEFLIDLERD 374
K+ ++ +A+ ++R+
Sbjct: 272 YGKQGKVEQAMSVYQSMKRE 291
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 91/207 (43%), Gaps = 4/207 (1%)
Query: 159 LALLEESFEANIR----DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
L+L +E E NIR YT +I +GK+ ++ AE + G + D + ++
Sbjct: 412 LSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDG 471
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
+ GN+ A + +E+ D+ ++ +++ Y R ++ + LL EM + +
Sbjct: 472 HCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPD 531
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
Y L+ GYS G+ + A VF+ + G P LI Y G++ A +
Sbjct: 532 HISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLR 591
Query: 335 NMRKAGLEPSDKCVALILSACEKENQL 361
M+ G+ P D ++ A + + L
Sbjct: 592 EMQSKGITPDDSTYLYVIEAMKTNDDL 618
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 105/238 (44%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
A++ Y +IH + +I+ AE+ + M+ +G D VT + + Y + GN K A
Sbjct: 355 ASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSL 414
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
F+E+ +Y S++ + + + E ++ + + ++ AL+ G+ +
Sbjct: 415 FDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCV 474
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
NGN + A ++ + + A + PD L+ Y + ++A M++ G++P
Sbjct: 475 NGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHIS 534
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++S K + ALE ++ GF L + ++G + E +LRE
Sbjct: 535 YNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLRE 592
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 97/245 (39%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
LLE N Y +I G K + A M RG + T +++
Sbjct: 313 LLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKR 372
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ AE+ +E++ G D +Y + Y R G + L EM + + E Y +
Sbjct: 373 IEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTS 432
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ + A+ F+ G+ PD M LI+ + + G +A+ + M A
Sbjct: 433 LIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAK 492
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+ P + ++ +E ++ A + L +++ G + TL + + + G +++
Sbjct: 493 VVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDAL 552
Query: 401 HVLRE 405
V E
Sbjct: 553 EVFDE 557
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/198 (19%), Positives = 80/198 (40%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I+GY + + + A MK + D T + K ++ A
Sbjct: 251 NVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVL 310
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ G + +Y +++ G LD+ EM + + Y L+ +
Sbjct: 311 CKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLE 370
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A+ + + ++ G+ PD + IN Y G ++KA + F M + + P+ +
Sbjct: 371 KRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETY 430
Query: 349 ALILSACEKENQLNRALE 366
++ K N+++ A E
Sbjct: 431 TSLIDVFGKRNRMSEAEE 448
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 100/244 (40%), Gaps = 2/244 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+++ + + Y I K+ +I+ A L + G + + VT ++ G+L
Sbjct: 280 DKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLD 339
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A +E+ G +Y ++ A ++ E +++EM + V Y +
Sbjct: 340 KAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQI 399
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
GY GN++ A +F+ + I P LI+ + + +A F+ K G+
Sbjct: 400 NGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGML 459
Query: 343 PSDKCV-ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEH 401
P ALI C N ++RA + L +++ + + TL + R VEE +
Sbjct: 460 PDIIMFNALIDGHCVNGN-IDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKK 518
Query: 402 VLRE 405
+L E
Sbjct: 519 LLDE 522
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 36/191 (18%), Positives = 80/191 (41%), Gaps = 3/191 (1%)
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+KMA +EE+ + ++ M+ R G + + + M+ V Y
Sbjct: 198 IKMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNT 257
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ GY + G E A ++F+ ++ + PD I+ + ++A + ++G
Sbjct: 258 VINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESG 317
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGK-EASCTLAAWF--KRLGVVE 397
L P+ ++ C + L++A + ++ G + + + A F KR+ E
Sbjct: 318 LVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAE 377
Query: 398 EVEHVLREYGL 408
++ +RE G+
Sbjct: 378 DMIKEMREKGV 388
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 130/313 (41%), Gaps = 13/313 (4%)
Query: 102 RCKAFVKQIICVSP-ETGNLSDLLAAW--VR---FMKPRRADWLAVLKQLKLMEHPLYLQ 155
RC FV + ++ ++G +SD + + VR F P + K + P+ +
Sbjct: 150 RCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMIN-SNSPVTIW 208
Query: 156 VAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
+LE F ++ Y +I+ + K+ I++A+ +++RG V+ ++
Sbjct: 209 TFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGL 268
Query: 216 SKAGNLKMA---EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY 272
K+ NL ++T EE ++ D +Y ++ + G LD E L EM + +
Sbjct: 269 CKSRNLDEGFRLKKTMEENRIYP---DVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLR 325
Query: 273 VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTA 332
+ AL+ G + + A + + G+ PD M L+N G KA
Sbjct: 326 PNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKL 385
Query: 333 FQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKR 392
M+ G++P ++ KE L A+E + +G ++ A L + F R
Sbjct: 386 VDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCR 445
Query: 393 LGVVEEVEHVLRE 405
G V + E LRE
Sbjct: 446 DGRVRDAERTLRE 458
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 107/225 (47%), Gaps = 8/225 (3%)
Query: 154 LQVAELALLEESFEANIR----DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLT 209
L VAE L +E + +R +T +I G + ++ +A NT M G D V
Sbjct: 309 LDVAE-QLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYN 367
Query: 210 VMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQ 269
++ K G++ A + +E+K++G DK +Y +++ Y + G L+ + + M+ +
Sbjct: 368 TLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEE 427
Query: 270 EVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
V + + + AL+ G+ +G A+R + AG+ PD ++I+ Y G +
Sbjct: 428 GVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMG 487
Query: 330 YTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA---LEFLIDL 371
+ + M+ G +P ++++ K+ Q+ A LE +++L
Sbjct: 488 FKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNL 532
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 71/155 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I GY K+ +++A M G + D V T ++ + + G ++ AE T E+
Sbjct: 401 YTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMV 460
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y ++ Y + G + G LL+EM G Y L+ G G +
Sbjct: 461 EAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMK 520
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQ 327
A + EA+ G+TPD +L+ + G+++
Sbjct: 521 NANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAE 555
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 97/217 (44%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E ++ Y+ +IHG K+ ++ AE M++RG + +T T ++ ++ +
Sbjct: 286 ENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMD 345
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A T+ ++ +G D Y +++ + G +++ L+ EM + Y L+
Sbjct: 346 SAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLI 405
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
GY G+ E A + + + G+ D LI+ + G+ + A + M +AG++
Sbjct: 406 DGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMK 465
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
P D +++ K+ + + L +++ +G G
Sbjct: 466 PDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPG 502
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 79/180 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +++G K + A + MK G D++T T ++ Y K G+L+ A E + +
Sbjct: 366 YNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMN 425
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G LD ++ +++ + R G + E LREM + Y ++ GY GN +
Sbjct: 426 EEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVK 485
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
++ + +Q G P +L+N GQ + A + M G+ P D ++L
Sbjct: 486 MGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILL 545
>gi|224093190|ref|XP_002309826.1| predicted protein [Populus trichocarpa]
gi|222852729|gb|EEE90276.1| predicted protein [Populus trichocarpa]
Length = 1480
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 103/233 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I YG+ AE ++ RGF D V+ ++ +++ GN++ +E +EE+
Sbjct: 364 YNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSLLYAFAREGNVEKVKEIWEEMV 423
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+G D+ +Y +M+ Y + G + L R+M + + Y L+
Sbjct: 424 KIGFGKDEMTYNTMIHMYGKQGQNELALQLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIA 483
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A V + G+ P + + LI Y AG+ +A F M ++G+ P +++L
Sbjct: 484 EAAGVMSEMLNTGVKPTLKTYSALICGYAKAGKPVEAEETFDCMLRSGIRPDHLAYSVML 543
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ N+ RA+ ++ DG + + +++ VE++ V+R+
Sbjct: 544 DIHLRFNEPKRAMTLYKEMLHDGITLDHSLYELMLRTLRKVNKVEDIGRVIRD 596
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 84/169 (49%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
++R G D +T ++ S+A NL+ A + F++++ D +Y +M+ Y R G+
Sbjct: 317 VRRSGLRPDTITYNTLISACSRASNLEEAAKVFDDMEAHHCQPDLWTYNAMISVYGRCGL 376
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
+ E L +++++ + + Y +LL ++ GN E + ++E + G D
Sbjct: 377 SGKAEQLFNDLESRGFFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIGFGKDEMTYNT 436
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
+I+ Y GQ++ A +++M+ +G P +++ + K N++ A
Sbjct: 437 MIHMYGKQGQNELALQLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIAEA 485
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 120/283 (42%), Gaps = 25/283 (8%)
Query: 114 SPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFE--ANIR 171
SP ++ LL A + R D L V+ Q +L + + + + L+ ++F NI
Sbjct: 845 SPTVDTINGLLQA---LIVDGRLDELYVVVQ-ELQDMGFKISKSSILLMLDAFARAGNIF 900
Query: 172 DYTKIIHG-------------------YGKKMQIQNAENTLLAMKRRGFICDQVTLTVMV 212
+ KI HG + Q+++ E L M+ GF D ++
Sbjct: 901 EVKKIYHGMKAAGYFPTMHLYRVMARLLSRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVL 960
Query: 213 VMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY 272
MY + + + ++ IK G D+ +Y ++++ Y R + G L+ EM +
Sbjct: 961 KMYVAIEDFRKTIQVYQRIKEDGLEPDEDTYNTLIVMYCRDHRPEEGFSLMHEMRVAGLE 1020
Query: 273 VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTA 332
+ YK+L+ + E A+ +FE +Q G D ++ Y+ +G KA
Sbjct: 1021 PKLDTYKSLVASFGKQQLVEQAEELFEELQSKGCKLDRSFYHTMMKIYRNSGSHSKAERL 1080
Query: 333 FQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
F M+ AG+EP+ + L++ + Q A + L +L+ G
Sbjct: 1081 FSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETG 1123
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 95/207 (45%), Gaps = 13/207 (6%)
Query: 170 IRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFE 229
I D+ K I Y + +K G D+ T ++VMY + +
Sbjct: 966 IEDFRKTIQVYQR-------------IKEDGLEPDEDTYNTLIVMYCRDHRPEEGFSLMH 1012
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
E+++ G +Y S+V ++ + ++++ E L E+ ++ + Y +++ Y +G
Sbjct: 1013 EMRVAGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSKGCKLDRSFYHTMMKIYRNSG 1072
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
+ A+R+F ++ AG+ P LL+ +Y +GQ Q+A N+++ G S +
Sbjct: 1073 SHSKAERLFSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETGSNLSTLPYS 1132
Query: 350 LILSACEKENQLNRALEFLIDLERDGF 376
++ A + N ++ LI ++++G
Sbjct: 1133 SVIDAYLRNGDYNIGIQKLIQMKKEGL 1159
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 92/200 (46%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +++ + ++ ++ + M + GF D++T M+ MY K G ++A + + +++
Sbjct: 399 YNSLLYAFAREGNVEKVKEIWEEMVKIGFGKDEMTYNTMIHMYGKQGQNELALQLYRDMQ 458
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y ++ + + + ++ EM V + Y AL+ GY+ G
Sbjct: 459 SSGRNPDAVTYTVLIDSLGKTNKIAEAAGVMSEMLNTGVKPTLKTYSALICGYAKAGKPV 518
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ F+ + +GI PD +++++ + + ++A T ++ M G+ L+L
Sbjct: 519 EAEETFDCMLRSGIRPDHLAYSVMLDIHLRFNEPKRAMTLYKEMLHDGITLDHSLYELML 578
Query: 353 SACEKENQLNRALEFLIDLE 372
K N++ + D+E
Sbjct: 579 RTLRKVNKVEDIGRVIRDME 598
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 92/215 (42%), Gaps = 2/215 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL- 221
E S ++ Y ++ Y ++ + + L M+ RG D V+ ++ KAG +
Sbjct: 247 EPSAGNTVQVYNAMMGVYARRGRFNKVQELLDLMRERGCKPDLVSFNTLINARLKAGAMM 306
Query: 222 -KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+A E E++ G D +Y +++ A RA L+ + +M+A Y A
Sbjct: 307 PNLAIELLNEVRRSGLRPDTITYNTLISACSRASNLEEAAKVFDDMEAHHCQPDLWTYNA 366
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ Y G S A+++F ++ G PDA L+ A+ G +K ++ M K G
Sbjct: 367 MISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIG 426
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+ ++ K+ Q AL+ D++ G
Sbjct: 427 FGKDEMTYNTMIHMYGKQGQNELALQLYRDMQSSG 461
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 101/247 (40%), Gaps = 2/247 (0%)
Query: 131 MKPRRADWLAVLKQLKLMEH-PLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNA 189
KP + W +VLK +E +QV + + E+ E + Y +I Y + + +
Sbjct: 949 FKPDLSIWNSVLKMYVAIEDFRKTIQVYQ-RIKEDGLEPDEDTYNTLIVMYCRDHRPEEG 1007
Query: 190 ENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMA 249
+ + M+ G T +V + K ++ AEE FEE++ G LD+ Y +M+
Sbjct: 1008 FSLMHEMRVAGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSKGCKLDRSFYHTMMKI 1067
Query: 250 YVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPD 309
Y +G + E L M V L+ Y +G + A++V ++ G
Sbjct: 1068 YRNSGSHSKAERLFSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETGSNLS 1127
Query: 310 ARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLI 369
+ +I+AY G M+K GLEP + + A + + A+ L
Sbjct: 1128 TLPYSSVIDAYLRNGDYNIGIQKLIQMKKEGLEPDHRIWTCFIRAASLSRRTSEAIVLLN 1187
Query: 370 DLERDGF 376
L+ GF
Sbjct: 1188 ALQDAGF 1194
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 94/210 (44%), Gaps = 12/210 (5%)
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
GF + ++ +M+ +++AGN+ ++ + +K G + +M + V A +L RG
Sbjct: 878 GFKISKSSILLMLDAFARAGNIFEVKKIYHGMKAAG------YFPTMHLYRVMARLLSRG 931
Query: 260 ------EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
E +L EM+ ++ ++L+ Y + +V++ I+ G+ PD
Sbjct: 932 KQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTY 991
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
LI Y + ++ ++ MR AGLEP ++++ K+ + +A E +L+
Sbjct: 992 NTLIVMYCRDHRPEEGFSLMHEMRVAGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQS 1051
Query: 374 DGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
G + + T+ ++ G + E +
Sbjct: 1052 KGCKLDRSFYHTMMKIYRNSGSHSKAERLF 1081
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/273 (19%), Positives = 104/273 (38%), Gaps = 37/273 (13%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
NI Y +I YG+ Q AE+ +++R D+ ++ Y+ +G + A F
Sbjct: 777 NISLYVNVIEAYGRLKLWQKAESVAGNLRQRCITVDRKVWNALIEAYAASGCYERARAIF 836
Query: 229 -----------------------------------EEIKLLGEPLDKRSYGSMVMAYVRA 253
+E++ +G + K S M+ A+ RA
Sbjct: 837 NTMMRDGPSPTVDTINGLLQALIVDGRLDELYVVVQELQDMGFKISKSSILLMLDAFARA 896
Query: 254 GMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
G + + + M A + +Y+ + R S + + ++ AG PD +
Sbjct: 897 GNIFEVKKIYHGMKAAGYFPTMHLYRVMARLLSRGKQVRDVEAMLSEMEEAGFKPDLSIW 956
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPS-DKCVALILSACEKENQLNRALEFLIDLE 372
++ Y +K +Q +++ GLEP D LI+ C ++++ + ++
Sbjct: 957 NSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTYNTLIVMYC-RDHRPEEGFSLMHEMR 1015
Query: 373 RDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
G + +L A F + +VE+ E + E
Sbjct: 1016 VAGLEPKLDTYKSLVASFGKQQLVEQAEELFEE 1048
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 92/225 (40%), Gaps = 3/225 (1%)
Query: 154 LQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVV 213
L+V E L + N R + I+ GK Q A + + QV M+
Sbjct: 204 LEVYEWLNLRHWYSPNARMLSTILSVLGKANQEALAVEVFMRAEPSAGNTVQV-YNAMMG 262
Query: 214 MYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG--MLDRGEVLLREMDAQEV 271
+Y++ G +E + ++ G D S+ +++ A ++AG M + LL E+ +
Sbjct: 263 VYARRGRFNKVQELLDLMRERGCKPDLVSFNTLINARLKAGAMMPNLAIELLNEVRRSGL 322
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
+ Y L+ S N E A +VF+ ++ PD +I+ Y G S KA
Sbjct: 323 RPDTITYNTLISACSRASNLEEAAKVFDDMEAHHCQPDLWTYNAMISVYGRCGLSGKAEQ 382
Query: 332 AFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
F ++ G P +L A +E + + E ++ + GF
Sbjct: 383 LFNDLESRGFFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIGF 427
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 59/140 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ Y AE MK G T+ +++V Y +G + AE+ +K
Sbjct: 1061 YHTMMKIYRNSGSHSKAERLFSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLK 1120
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G L Y S++ AY+R G + G L +M + + ++ +R S++ +
Sbjct: 1121 ETGSNLSTLPYSSVIDAYLRNGDYNIGIQKLIQMKKEGLEPDHRIWTCFIRAASLSRRTS 1180
Query: 293 GAQRVFEAIQFAGITPDARM 312
A + A+Q AG R+
Sbjct: 1181 EAIVLLNALQDAGFDLPIRL 1200
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 86/205 (41%), Gaps = 13/205 (6%)
Query: 208 LTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRS---YGSMVMAYVRAGMLDRGEVLL- 263
L+ ++ + KA +A E F + EP + Y +M+ Y R G ++ + LL
Sbjct: 223 LSTILSVLGKANQEALAVEVF----MRAEPSAGNTVQVYNAMMGVYARRGRFNKVQELLD 278
Query: 264 --REMDAQEVYVG-SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAY 320
RE + V + + A L+ +M N A + ++ +G+ PD LI+A
Sbjct: 279 LMRERGCKPDLVSFNTLINARLKAGAMMPNL--AIELLNEVRRSGLRPDTITYNTLISAC 336
Query: 321 QMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGK 380
A ++A F +M +P ++S + +A + DLE GF
Sbjct: 337 SRASNLEEAAKVFDDMEAHHCQPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDA 396
Query: 381 EASCTLAAWFKRLGVVEEVEHVLRE 405
+ +L F R G VE+V+ + E
Sbjct: 397 VSYNSLLYAFAREGNVEKVKEIWEE 421
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 117/263 (44%), Gaps = 8/263 (3%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L++ ++ Y I+HG K+ + A+ M RG D TLT+++ + K GN
Sbjct: 426 MLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGN 485
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ A E F+++K LD +Y +++ + + G +D + + +M ++E+ +
Sbjct: 486 LQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSI 545
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G+ A RV++ + I P +C +I Y +G + + M G
Sbjct: 546 LVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEG 605
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLE--RDGFMVGKEASCTLAAWFKRLGVVEE 398
P ++ KE +++A + +E + G + ++ F R ++E
Sbjct: 606 FVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKE 665
Query: 399 VEHVLR---EYGL---RETYSKI 415
E VLR E G+ R TY+ +
Sbjct: 666 AEAVLRKMIERGVNPDRSTYTSL 688
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 91/210 (43%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
+ R G + TL +MV K G ++ E++ G D +Y +++ AY G+
Sbjct: 216 ISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGL 275
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
++ L+ M ++ G Y ++ G +G E A+ VF + +G++PD+
Sbjct: 276 MEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 335
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
L+ G + + F +MR + P C + ++S + L++AL + ++ G
Sbjct: 336 LLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 395
Query: 376 FMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ L + R G++ E ++ E
Sbjct: 396 LIPDNVIYTILIQGYCRKGMISEAMNLRNE 425
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 91/227 (40%), Gaps = 2/227 (0%)
Query: 147 LMEHPLYLQVAEL--ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICD 204
L +H Y + E+ +L + Y ++ KK EN M+ R + D
Sbjct: 305 LCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPD 364
Query: 205 QVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLR 264
V + M+ +++++GNL A F +K G D Y ++ Y R GM+ L
Sbjct: 365 LVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRN 424
Query: 265 EMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAG 324
EM Q + Y +L G A ++F + G+ PD+ +LI+ + G
Sbjct: 425 EMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLG 484
Query: 325 QSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDL 371
Q A F+ M++ ++ +L K ++ A E D+
Sbjct: 485 NLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADM 531
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 79/178 (44%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E+ +I Y +I Y + ++ A + AM +GF T ++ K G +
Sbjct: 253 EKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYE 312
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A+E F E+ G D +Y S++M + G E + +M +++V + +++
Sbjct: 313 RAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMM 372
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ +GN + A F +++ AG+ PD + +LI Y G +A M + G
Sbjct: 373 SLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQG 430
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 83/191 (43%), Gaps = 1/191 (0%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
+N + +I + + +++ A ++ +G+ ++ + G +++A
Sbjct: 153 SNDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRI 212
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
++EI G ++ + MV A + G +++ L E+ + VY Y L+ YS
Sbjct: 213 YQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSS 272
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G E A + A+ G +P +IN G+ ++A F M ++GL P
Sbjct: 273 QGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTT 332
Query: 348 V-ALILSACEK 357
+L++ AC+K
Sbjct: 333 YRSLLMEACKK 343
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 116/291 (39%), Gaps = 27/291 (9%)
Query: 106 FVKQIICVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQ---VAELALL 162
F+ + IC S + GN S++ +R + P LAV++ L + L L V +L
Sbjct: 43 FLVEKICFSLKQGN-SNVRNHLIR-LNP-----LAVVEVLYRCRNDLSLGQRFVDQLGFN 95
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN-- 220
+F+ + +IH + ++ +A++ +L M RR + + +V YS G+
Sbjct: 96 FPNFKHTSLSLSAMIHILVRSGRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGSND 155
Query: 221 ---------------LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLRE 265
L+ A E F ++ G + + +++ + VR G ++ + +E
Sbjct: 156 SVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQE 215
Query: 266 MDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQ 325
+ V V ++ +G E +Q G+ PD LI+AY G
Sbjct: 216 ISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGL 275
Query: 326 SQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
++A+ M G P +++ K + RA E ++ R G
Sbjct: 276 MEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGL 326
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/246 (19%), Positives = 97/246 (39%), Gaps = 6/246 (2%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
A+ + F + Y +I+G K + + A+ M R G D T +++ K G
Sbjct: 285 AMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG 344
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ E F +++ D + SM+ + R+G LD+ + + + + +Y
Sbjct: 345 DAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYT 404
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAY---QMAGQSQKAYTAFQNM 336
L++GY G A + + G D +++ +M G++ K F M
Sbjct: 405 ILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADK---LFNEM 461
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVV 396
+ GL P + +++ K L A+E ++ + TL F ++G +
Sbjct: 462 TERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDI 521
Query: 397 EEVEHV 402
+ + +
Sbjct: 522 DTAKEI 527
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/200 (17%), Positives = 87/200 (43%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
N+ +++ K +++ L ++ +G D VT ++ YS G ++ A E
Sbjct: 223 VNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFEL 282
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
+ G +Y +++ + G +R + + EM + S Y++LL
Sbjct: 283 MHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACK 342
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G++ + +F ++ + PD + +++ + +G KA F ++++AGL P +
Sbjct: 343 KGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVI 402
Query: 348 VALILSACEKENQLNRALEF 367
+++ ++ ++ A+
Sbjct: 403 YTILIQGYCRKGMISEAMNL 422
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 62/138 (44%), Gaps = 2/138 (1%)
Query: 211 MVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE 270
M+ Y ++GN E E++ G D SY +++ +V+ + + L+++M+ ++
Sbjct: 581 MIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQ 640
Query: 271 VYVGSEV--YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
+ +V Y ++L G+ + A+ V + G+ PD LIN + +
Sbjct: 641 GGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTE 700
Query: 329 AYTAFQNMRKAGLEPSDK 346
A+ M + G P DK
Sbjct: 701 AFRFHDEMLQRGFSPDDK 718
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 5/210 (2%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
MK GF D +T V++ K GN A E ++++L G D +Y S++ A++ +G+
Sbjct: 478 MKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGL 537
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
L + E + +M + ++ Y L+ Y++ G + A++ F+ +Q G++P+
Sbjct: 538 LRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNA 597
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLID-LERD 374
LI AY F M G+ P+ ++++ AL+ D L+R+
Sbjct: 598 LIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDRE 657
Query: 375 GFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
K SCT +A K L ++ VLR
Sbjct: 658 ----IKPDSCTHSALMKHLSKDYKLLAVLR 683
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 96/203 (47%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G + + A+ M + G D VT T++V + + GNL MA+E F+E+
Sbjct: 385 YNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEML 444
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y + ++ ++ G + + EM A+ Y L+ G GN +
Sbjct: 445 SRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFD 504
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + ++ GI PD +I+A+ ++G +KA F +M K G+ PS +++
Sbjct: 505 DANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLI 564
Query: 353 SACEKENQLNRALEFLIDLERDG 375
+ +L+ A ++ +++ G
Sbjct: 565 HSYAVRGRLDFAKKYFDEMQDKG 587
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 2/208 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ +T ++ G+ + + A+ M RG D + T +V K GN A
Sbjct: 416 DVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMK 475
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
EE+K G P D +Y ++ + G D L+++M + + Y +++ + ++
Sbjct: 476 EEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLIS 535
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G A+ VF + GI P +LI++Y + G+ A F M+ G+ P+
Sbjct: 536 GLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITY 595
Query: 349 -ALILSACEKENQLNRALEFLIDLERDG 375
ALI C KEN ++ A ++E G
Sbjct: 596 NALIYGLC-KENMMDVAYNLFAEMESKG 622
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 58/148 (39%), Gaps = 2/148 (1%)
Query: 199 RGFICD--QVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGML 256
R F CD V+ V+V S G A+E E++ +LG + +Y ++ + + M
Sbjct: 234 RMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMF 293
Query: 257 DRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALL 316
+ L REM + Y ++ G A+R + + + PD L
Sbjct: 294 EEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTL 353
Query: 317 INAYQMAGQSQKAYTAFQNMRKAGLEPS 344
I Y G +A F +R L PS
Sbjct: 354 IYGYSRLGNFAEALLLFSELRSKNLVPS 381
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/205 (20%), Positives = 82/205 (40%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y I++ + ++ +A L M + D V+ ++ YS+ GN A F E++
Sbjct: 315 YNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELR 374
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+Y +++ R G LD + + +M + + L+RG+ GN
Sbjct: 375 SKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLP 434
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ +F+ + G+ PD I G KA+ + M+ G P +++
Sbjct: 435 MAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLI 494
Query: 353 SACEKENQLNRALEFLIDLERDGFM 377
+ K + A E + + +G +
Sbjct: 495 NGLCKLGNFDDANELVQKMRLEGIV 519
>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
Length = 834
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 127/303 (41%), Gaps = 53/303 (17%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E E ++ Y +I+ + + +++ AE L RRG +++T T +V Y K G
Sbjct: 341 ENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYT 400
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG-----------MLDRG------------ 259
A + E+ G +D SYG+++ V AG M++RG
Sbjct: 401 KATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLM 460
Query: 260 ------------EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGIT 307
+V+L EM Q + + VY L+ G+ +GN + A+++F+ I G+
Sbjct: 461 NGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLD 520
Query: 308 PDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
P ++I + +G A MR+A P + I+ K++ +N L+
Sbjct: 521 PGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKI 580
Query: 368 LIDLERDGFMVGKEASCTLAAW------FKRLG---VVEEVEHVLREYGLRE---TYSKI 415
G MV + + + + R G + E++ ++R +GL+ TYS +
Sbjct: 581 F------GLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSIL 634
Query: 416 PGS 418
GS
Sbjct: 635 IGS 637
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 89/202 (44%), Gaps = 2/202 (0%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
+ANI Y +++G KK ++ A+ L M + D +V + + GNL A++
Sbjct: 452 DANI--YNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKK 509
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
F+ I G Y M+ + ++GM+D + + +M + ++ GY
Sbjct: 510 LFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYV 569
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
N ++F + P+ LIN Y G+++ A F MR GL+PS
Sbjct: 570 KQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVV 629
Query: 347 CVALILSACEKENQLNRALEFL 368
++++ + KE +L +A+ +
Sbjct: 630 TYSILIGSFCKEAKLGKAVSYF 651
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 76/174 (43%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
NI Y +I GY KK ++++A +K +GFI T +V + K G + +
Sbjct: 242 NIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLL 301
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E+K G ++ + Y +++ A + G + + L+EM Y L+ +
Sbjct: 302 LEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSR 361
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G E A+++ E G+ P+ L++ Y G+ KA M +GLE
Sbjct: 362 GEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLE 415
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 98/211 (46%), Gaps = 2/211 (0%)
Query: 170 IRDYTK--IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
+ +YT ++ G K +I++ + + +G + + V ++ Y K G ++ A +
Sbjct: 206 VDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKL 265
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
F+++K+ G +++GS+V + + GM + ++LL EM + + V ++Y ++
Sbjct: 266 FKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYK 325
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G A+ + + PD LIN + G+ ++A + + GL P+
Sbjct: 326 LGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLT 385
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMV 378
++ K+ + +A ++LI++ G V
Sbjct: 386 YTPLVHGYCKQGEYTKATDYLIEMSTSGLEV 416
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 92/232 (39%), Gaps = 6/232 (2%)
Query: 154 LQVAELALLE---ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTV 210
+ +L LLE N++ Y II K A++TL M D VT
Sbjct: 294 FEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNT 353
Query: 211 MVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE 270
++ + G ++ AE+ E+ G +K +Y +V Y + G + L EM
Sbjct: 354 LINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSG 413
Query: 271 VYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAY 330
+ V Y AL+ G + G + A + + + GI PDA + +L+N G+ A
Sbjct: 414 LEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAK 473
Query: 331 TAFQNMRKAGLEPSDKCVALILSACEKENQLNRA---LEFLIDLERDGFMVG 379
M + P A ++ + L+ A + +I+ D +VG
Sbjct: 474 VMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVG 525
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 103/249 (41%), Gaps = 16/249 (6%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS------- 216
+ F ++ + +++G+ K + + LL MK RG L+V V MY+
Sbjct: 272 KGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRG-------LSVNVQMYNNIIDARY 324
Query: 217 KAGNLKMAEETFEEI-KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
K G A++T +E+ + EP D +Y +++ + G ++ E LL + + +
Sbjct: 325 KLGFDIKAKDTLKEMSENCCEP-DLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNK 383
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
Y L+ GY G A + +G+ D LI+ +AG+ A T
Sbjct: 384 LTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDR 443
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGV 395
M G+ P ++++ K+ +L+ A L ++ TL F R G
Sbjct: 444 MMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGN 503
Query: 396 VEEVEHVLR 404
++E + + +
Sbjct: 504 LDEAKKLFQ 512
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/185 (18%), Positives = 82/185 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L+++ + Y ++ G+ + + A+ + +G V VM+ +SK+G
Sbjct: 479 MLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGM 538
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A ++++ D ++ +++ YV+ ++ + M Q Y +
Sbjct: 539 MDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTS 598
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ GY G ++ A+++F ++ G+ P ++LI ++ + KA + F+ M
Sbjct: 599 LINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLINK 658
Query: 341 LEPSD 345
P+D
Sbjct: 659 CTPND 663
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 61/160 (38%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E+ + + Y +I G+ K + NA + M+R + D T + ++ Y K N
Sbjct: 514 IIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHN 573
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ + F + + +Y S++ Y R G E L M + + Y
Sbjct: 574 MNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSI 633
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAY 320
L+ + A FE + TP+ L+N +
Sbjct: 634 LIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGF 673
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 68/160 (42%), Gaps = 5/160 (3%)
Query: 190 ENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPL-DKRSYGSMVM 248
E TL MK + I + L+ ++ Y+ G + A E + + L L + S++
Sbjct: 118 EFTLEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLN 177
Query: 249 AYVRAGMLDRGEVLLREM----DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFA 304
V+ ++ L EM + ++ V + +++G + G E ++ E+
Sbjct: 178 LLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGK 237
Query: 305 GITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
G P+ LI+ Y G+ + AY F+ ++ G P+
Sbjct: 238 GCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPT 277
>gi|297736961|emb|CBI26162.3| unnamed protein product [Vitis vinifera]
Length = 636
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 120/277 (43%), Gaps = 7/277 (2%)
Query: 102 RCKAFVKQI--ICVSPETGNLSDLLAAWV-RFMKPRRADWLAVLKQL-KLMEHPLYLQVA 157
R AF K I C G +SDLL + + R P + V+ L K + P +V
Sbjct: 296 RNAAFNKLISGFCKDKAYGRVSDLLHSMIARNRAPDIFTYQEVVNGLCKGGKGPEGFRVF 355
Query: 158 ELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSK 217
+ L + + + YT +IHG + + +A M ++GF+ ++ T M+ Y K
Sbjct: 356 K-DLKDRGYAPDRVMYTTMIHGLCRMKWLGDARKLWFEMIQKGFLPNEYTYNAMIHGYFK 414
Query: 218 AGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
GNL+ A + + E+ G SY M+ G + L EM + +
Sbjct: 415 IGNLEEAWKMYREMCDKGYGEKTVSYNVMIKGLCSHGKIKEAHDLFEEMSHKGILRNHIT 474
Query: 278 YKALLRGYSMNGN-SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
Y AL+RG+ G EGA ++E + GI P A A LI+ G Q A + +M
Sbjct: 475 YNALVRGFCKEGKIVEGANLLYELLD-QGIQPSAASYAPLIDKLCQEGDMQNAKILWDDM 533
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
+ G+EP+ +++ K+ +E+L + R
Sbjct: 534 QNRGMEPAVCTHDFMITGFCKQGCAMEGMEWLTTMLR 570
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 95/216 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++++ F N Y +IHGY K ++ A M +G+ V+ VM+ G
Sbjct: 393 MIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYNVMIKGLCSHGK 452
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+K A + FEE+ G + +Y ++V + + G + G LL E+ Q + + Y
Sbjct: 453 IKEAHDLFEEMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYELLDQGIQPSAASYAP 512
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G+ + A+ +++ +Q G+ P +I + G + + M ++
Sbjct: 513 LIDKLCQEGDMQNAKILWDDMQNRGMEPAVCTHDFMITGFCKQGCAMEGMEWLTTMLRSK 572
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
L P K ++ + ++L+ AL L + + GF
Sbjct: 573 LRPQKKSFESLIQCLSQIDRLDDALLVLDSMLKIGF 608
>gi|357132372|ref|XP_003567804.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Brachypodium distachyon]
Length = 851
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 88/195 (45%), Gaps = 4/195 (2%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+LE+ + + ++ +++ R G + D T T +V MY+K G
Sbjct: 298 MLEQGLWPDATTVSSLLKSVANAGMVRHGMEVHCFFLRHGLVPDAYTGTALVDMYAKCGR 357
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A F+ + E + ++ S+V + AG + L+ M + +
Sbjct: 358 LDCARRVFDTL----EHRNLATWNSLVAGHAYAGQFEAALELVERMKRNRLDPNVTTWNG 413
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ GYS+NG S A + I+ AG+TP+ LI+ G+ + ++ F+ M+K G
Sbjct: 414 LITGYSLNGLSSQAMLLLRQIKAAGLTPNVVSWTSLISGSCHNGEYEDSFNFFKEMQKDG 473
Query: 341 LEPSDKCVALILSAC 355
++PS + ++L AC
Sbjct: 474 VQPSLVTMLVLLRAC 488
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 100/238 (42%), Gaps = 13/238 (5%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
+ N+ + +I GY A L +K G + V+ T ++ G + +
Sbjct: 404 LDPNVTTWNGLITGYSLNGLSSQAMLLLRQIKAAGLTPNVVSWTSLISGSCHNGEYEDSF 463
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVL----LREMDAQEVYVGSEVYKAL 281
F+E++ G + ++ A +L +G+ L LR ++ VG+ AL
Sbjct: 464 NFFKEMQKDGVQPSLVTMLVLLRACAGLALLKKGKELHCFALRRAYDCDMVVGT----AL 519
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+ YS G+ A+R+F IQ + C ++ + GQS +A T F ++ ++GL
Sbjct: 520 IDMYSKAGSLTSAKRIFGRIQNKNLV----CCNAMLTGLAVHGQSHEAITLFHDLWRSGL 575
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLE-RDGFMVGKEASCTLAAWFKRLGVVEE 398
+P +L+AC + E+ ++E + G + E + R G ++E
Sbjct: 576 KPDSITFTALLTACRSMGLITEGWEYFDNMETKYGVVPTAENYACMVDLLARSGYLDE 633
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 104/248 (41%), Gaps = 14/248 (5%)
Query: 133 PRRADWLAVLK---QLKLMEHPLYLQVAELA--LLEESFEANIRDYTKIIHGYGKKMQIQ 187
PR W AV+ +L L++ + ELA + + E + + ++ G + + +
Sbjct: 235 PRSVAWDAVVACCVRLGLVDDAM-----ELAGRMARDGPEPTLATWNAVLSGCARHGRDR 289
Query: 188 NAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMV 247
A L M +G D T++ ++ + AG ++ E G D + ++V
Sbjct: 290 EALAVLRRMLEQGLWPDATTVSSLLKSVANAGMVRHGMEVHCFFLRHGLVPDAYTGTALV 349
Query: 248 MAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGIT 307
Y + G LD + ++ + + + +L+ G++ G E A + E ++ +
Sbjct: 350 DMYAKCGRLDCARRVFDTLEHRNL----ATWNSLVAGHAYAGQFEAALELVERMKRNRLD 405
Query: 308 PDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
P+ LI Y + G S +A + ++ AGL P+ ++S + + F
Sbjct: 406 PNVTTWNGLITGYSLNGLSSQAMLLLRQIKAAGLTPNVVSWTSLISGSCHNGEYEDSFNF 465
Query: 368 LIDLERDG 375
++++DG
Sbjct: 466 FKEMQKDG 473
>gi|449530367|ref|XP_004172167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like, partial [Cucumis sativus]
Length = 564
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%)
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A+ F+E K L+ YG+++ AY + +D+ E L+REM+ + + ++Y ++
Sbjct: 2 ADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMD 61
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
GY+M G+ + VFE + G+ P LIN Y G+ KA + M AG++
Sbjct: 62 GYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKH 121
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+ K +++++ K A DL +DG
Sbjct: 122 NMKTYSMLINGFLKLKDWANAFAIFEDLIKDGI 154
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 98/207 (47%)
Query: 170 IRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFE 229
+ Y +I G +K +++ AE L M G ++ T T ++ Y+ G+ A F
Sbjct: 228 VHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFAYFT 287
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
+++ G LD +Y +++ A ++G + + +EM AQ + + +Y L+ G++ G
Sbjct: 288 KLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRG 347
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
+ A + + ++ G+ PD INA AG Q+A + M+ G++P+ K
Sbjct: 348 DVWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYT 407
Query: 350 LILSACEKENQLNRALEFLIDLERDGF 376
+++ + + +AL +++ G
Sbjct: 408 TLINGWARASLPEKALSCFEEMKLSGL 434
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 76/176 (43%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N YT I+HGY A ++ G D T ++ K+G ++ A
Sbjct: 262 NEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVT 321
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+ P + Y ++ + R G + L+++M + V Y + + S
Sbjct: 322 KEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSKA 381
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
G+ + A + E ++ G+ P+ + LIN + A +KA + F+ M+ +GL+P
Sbjct: 382 GDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPD 437
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 87/201 (43%), Gaps = 1/201 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y II+ Y ++ + AE + M+ G M+ Y+ G+ FE K
Sbjct: 21 YGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFK 80
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G +YG ++ Y + G + + + +EM+ + + Y L+ G+ +
Sbjct: 81 ECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWA 140
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +FE + GI PD + +I A+ G+ +A + M+K +P+ + I+
Sbjct: 141 NAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPII 200
Query: 353 SACEKENQLNRALEFLIDLER 373
++ ++ +AL+ + D+ R
Sbjct: 201 HGFARKGEMKKALD-VFDMMR 220
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/214 (19%), Positives = 85/214 (39%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E ++ Y +I+ Y K ++ A M+ G + T ++++ + K +
Sbjct: 81 ECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWA 140
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A FE++ G D Y +++ A+ G +DR ++EM Q + + ++
Sbjct: 141 NAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPII 200
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++ G + A VF+ ++ +G P LI + +KA M AG+
Sbjct: 201 HGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVS 260
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
P++ I+ +A + L +G
Sbjct: 261 PNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGL 294
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 55/110 (50%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G+ ++ + A + + MKR G D T T + SKAG+++ A +T EE+K
Sbjct: 336 YNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMK 395
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
+G + ++Y +++ + RA + ++ EM + VY L+
Sbjct: 396 SVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYHCLM 445
>gi|357473771|ref|XP_003607170.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508225|gb|AES89367.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1173
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 96/209 (45%), Gaps = 2/209 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ E N+ Y +I G + Q+ A M+ + D+V ++ +++G
Sbjct: 611 MVNSGVEPNVHTYGALIDGCARAGQVAKAFGAYGIMRSKNVKADRVVFNALIAACAQSGA 670
Query: 221 LKMAEETFEEIKLLGEPL--DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
+ A + E++ +P+ D ++G+++ A +AG ++R + + + + SEVY
Sbjct: 671 MARAFDVIAEMEAEIQPIVPDHVTFGTLMKACAKAGQVERAREVYKMIQQYNIKGSSEVY 730
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
+ S G+ E A+ V++ + G+ PD + LI+ A + + A+ Q RK
Sbjct: 731 TIAINSCSQTGDWEFARSVYDDMTQKGVLPDEMFMSALIDVAGHAKKLEAAFDILQQARK 790
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEF 367
G++ + ++ AC K RALE
Sbjct: 791 EGVQIGIMTYSSLMGACSKAKNWQRALEL 819
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 96/225 (42%), Gaps = 14/225 (6%)
Query: 209 TVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
T ++ K G + + E F ++ G + +YG+++ RAG + + M +
Sbjct: 589 TTLISTCGKCGKVDLMFEVFHKMVNSGVEPNVHTYGALIDGCARAGQVAKAFGAYGIMRS 648
Query: 269 QEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI-----QFAGITPDARMCALLINAYQMA 323
+ V V+ AL+ + +G R F+ I + I PD L+ A A
Sbjct: 649 KNVKADRVVFNALIAACAQSG---AMARAFDVIAEMEAEIQPIVPDHVTFGTLMKACAKA 705
Query: 324 GQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGK--- 380
GQ ++A ++ +++ ++ S + + +++C + A D+ + G + +
Sbjct: 706 GQVERAREVYKMIQQYNIKGSSEVYTIAINSCSQTGDWEFARSVYDDMTQKGVLPDEMFM 765
Query: 381 EASCTLAAWFKRLGVVEEVEHVLREYGLR---ETYSKIPGSRSIA 422
A +A K+L ++ R+ G++ TYS + G+ S A
Sbjct: 766 SALIDVAGHAKKLEAAFDILQQARKEGVQIGIMTYSSLMGACSKA 810
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 73/167 (43%)
Query: 209 TVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
T+ + S+ G+ + A ++++ G D+ +++ A L+ +L++
Sbjct: 731 TIAINSCSQTGDWEFARSVYDDMTQKGVLPDEMFMSALIDVAGHAKKLEAAFDILQQARK 790
Query: 269 QEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
+ V +G Y +L+ S N + A ++E ++ + L+ A Q QK
Sbjct: 791 EGVQIGIMTYSSLMGACSKAKNWQRALELYEYLKSLKLVQTVSTVNALLTALCDGDQFQK 850
Query: 329 AYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
A M+ GL P+ ++++ A EK++ + A L ++DG
Sbjct: 851 ALEVLSEMKGLGLCPNSITFSILIVASEKKDDMEAAQMLLSQAKKDG 897
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 66/152 (43%), Gaps = 3/152 (1%)
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEV-LLREMDAQEVYVGSEVYKA 280
K E F+ ++L+ P S +M+M+ + G +++ + + ++Y
Sbjct: 533 KAVNEAFDYVRLIPNP--TLSTFNMLMSVCASSQDSEGAFQVIQLLKDARLDPDCKLYTT 590
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G + VF + +G+ P+ LI+ AGQ KA+ A+ MR
Sbjct: 591 LISTCGKCGKVDLMFEVFHKMVNSGVEPNVHTYGALIDGCARAGQVAKAFGAYGIMRSKN 650
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLE 372
++ +++AC + + RA + + ++E
Sbjct: 651 VKADRVVFNALIAACAQSGAMARAFDVIAEME 682
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 93/217 (42%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+++ N+ YT + G K+ +Q A L M +G + T ++ KAG
Sbjct: 459 TMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAG 518
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
L A T ++ G D +Y +++ A ++G LDR LL+EM + Y
Sbjct: 519 YLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYN 578
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ G+ M+G EG +++ E + I P+A L+ Y + + ++ M
Sbjct: 579 VLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSR 638
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+EP++ +++ K + A F ++ GF
Sbjct: 639 NVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGF 675
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 90/204 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT ++ G+ K + +A M+R+G D VT T ++ +AG LK AE+ +E+
Sbjct: 367 YTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEML 426
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+D+ +Y +V Y + G + + M + V Y AL G G+ +
Sbjct: 427 ARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQ 486
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + G+ +A LIN AG +A +M AGL+P ++
Sbjct: 487 AANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLI 546
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
A K +L+RA + L ++ +G
Sbjct: 547 DALCKSGELDRAHDLLQEMLDNGI 570
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 100/245 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ E N YT ++ K ++ +A + M I D+ T ++ + G+
Sbjct: 320 MVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGD 379
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A F+E++ G D +Y +++ RAG L E +L+EM A+ + V Y
Sbjct: 380 LVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTV 439
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ GY G A +V + G+ P+ L + G Q A M G
Sbjct: 440 LVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKG 499
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
LE + +++ K L++A+ + D++ G TL + G ++
Sbjct: 500 LELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAH 559
Query: 401 HVLRE 405
+L+E
Sbjct: 560 DLLQE 564
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 79/172 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I+G + +++ AE L M R D+VT TV+V Y K G + A + +
Sbjct: 402 YTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMV 461
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +Y ++ + G + LL EM + + + + Y +L+ G G +
Sbjct: 462 QRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLD 521
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A R + AG+ PD LI+A +G+ +A+ Q M G++P+
Sbjct: 522 QAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPT 573
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 82/202 (40%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D VT +++ Y G L+ A + +++ G + Y S+V G + ++
Sbjct: 293 DVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVV 352
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
+M +V + VY +L G+ G+ A+R F+ +Q G+ D LIN A
Sbjct: 353 EDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRA 412
Query: 324 GQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEAS 383
G+ ++A Q M L+ + +++ K ++ A + + + G
Sbjct: 413 GELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTY 472
Query: 384 CTLAAWFKRLGVVEEVEHVLRE 405
L+ + G V+ +L E
Sbjct: 473 TALSDGLCKQGDVQAANELLHE 494
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 7/206 (3%)
Query: 146 KLMEHPLYLQ---VAELALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKR 198
L+ H L++ L+EE ++ Y +I+G+ K+ ++ A M R
Sbjct: 630 NLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSR 689
Query: 199 RGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDR 258
RG VT T ++ SK G ++ ++ F+E G D Y +++ ++ +G +DR
Sbjct: 690 RGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDR 749
Query: 259 GEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLIN 318
++ EM+ + + Y L+RG + G + A+++ + + GI PD LI+
Sbjct: 750 AFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLIS 809
Query: 319 AYQMAGQSQKAYTAFQNMRKAGLEPS 344
Y M G + A M G P+
Sbjct: 810 GYSMKGDVKDALRIRNEMMNKGFNPT 835
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 2/199 (1%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
A + YT +I+ KK Q+Q + RRG D V ++ +S +GN+ A E
Sbjct: 694 ATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEI 753
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
E++ D +Y +++ G +D L+ EM + + Y L+ GYSM
Sbjct: 754 MGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSM 813
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G+ + A R+ + G P LI GQ A + M + G+ P D
Sbjct: 814 KGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDST 873
Query: 348 VALILSACEKENQLNRALE 366
++ E++ RA++
Sbjct: 874 YISLIEGLTTEDE--RAID 890
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 95/220 (43%), Gaps = 2/220 (0%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFIC-DQVTLTVMVVMYSK 217
L LL + N Y +I G+ + ++Q A + + M+ RG I +Q T ++ + K
Sbjct: 508 LELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCK 567
Query: 218 AGNLKMAEETFEEIKLLGE-PLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
G + A + F+E+ GE + Y +++ Y G LD + M + V +
Sbjct: 568 VGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVA 627
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
Y L+ M+G A + E + G+ PD +LIN + G +KA F+NM
Sbjct: 628 TYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENM 687
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+ G+ + ++ A K+ Q+ + + R G
Sbjct: 688 SRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGI 727
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 68/173 (39%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I GY + ++ A M RG T ++V G A E EE+
Sbjct: 594 YNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMG 653
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y ++ + + G + + + M + V Y AL+ S G +
Sbjct: 654 GKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQ 713
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
++F+ GI PD + LIN++ +G +A+ M K + P D
Sbjct: 714 ETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDD 766
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I G+ K+ + A + M +G + T +++ Y KA + E F ++
Sbjct: 371 YTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMS 430
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
L G D +Y +++ + G L+ + L +EM +++V YK LL G NG SE
Sbjct: 431 LRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESE 490
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +FE I+ + + D + ++I+ A + A+ F ++ G++P K +++
Sbjct: 491 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMI 550
Query: 353 SACEKENQLNRALEFLIDLERDG 375
K+ L+ A +E DG
Sbjct: 551 GGLCKKGPLSEAELLFRKMEEDG 573
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 109/245 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ N+ ++ +I + K+ +++ AE M RG D +T T ++ + K +
Sbjct: 324 MIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENH 383
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A + + + G + R++ ++ Y +A +D G L R+M + V + Y
Sbjct: 384 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 443
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L++G+ G A+ +F+ + + P+ +L++ G+S+KA F+ + K+
Sbjct: 444 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 503
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+E +I+ ++++ A + L G G + + + G + E E
Sbjct: 504 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 563
Query: 401 HVLRE 405
+ R+
Sbjct: 564 LLFRK 568
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 101/245 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E + N Y +++ K Q A L M+ R D V ++++ K G+
Sbjct: 219 MVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 278
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A F E+++ G + +Y ++ + AG D G LLR+M +++ +
Sbjct: 279 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 338
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ + G A+ + + + GI PD LI+ + KA M G
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+P+ + ++++ K N+++ LE + G + TL F LG + +
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458
Query: 401 HVLRE 405
+ +E
Sbjct: 459 ELFQE 463
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/224 (19%), Positives = 102/224 (45%), Gaps = 1/224 (0%)
Query: 155 QVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
Q+ +L ++ + + NIR + +I+GY K +I + M RG + D VT ++
Sbjct: 389 QMVDL-MVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQG 447
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
+ + G L +A+E F+E+ P + +Y ++ G ++ + +++ ++ +
Sbjct: 448 FCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELD 507
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+Y ++ G + A +F ++ G+ P + ++I G +A F+
Sbjct: 508 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFR 567
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMV 378
M + G P +++ A + ++++ + +L+R GF V
Sbjct: 568 KMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSV 611
>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 90/212 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + ++ +T +I G K + A M RG+ + VT T ++ Y GN
Sbjct: 246 MIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGN 305
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ MA E F+ I G D +Y + Y + G + + EM + V Y +
Sbjct: 306 VDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNS 365
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G GA + + + +G+TPD C +L++ + + +A F + ++G
Sbjct: 366 LIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESG 425
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLE 372
L P +++ C ++ A+ L D+
Sbjct: 426 LTPDVWSYTILIHGCCTSRRMGEAMNLLRDMH 457
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 81/208 (38%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+ E NI Y +I K ++ A + M R G D VT +++ K+
Sbjct: 351 MCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKR 410
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A F ++ G D SY ++ + + LLR+M + + Y
Sbjct: 411 LDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSC 470
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G +G A R+ + G PD ++L++A +A F M K G
Sbjct: 471 LIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRG 530
Query: 341 LEPSDKCVALILSACEKENQLNRALEFL 368
LEP C +++ K +++ A+
Sbjct: 531 LEPDVMCYTIMIDGYCKSERIDEAINLF 558
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 71/181 (39%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M RRG TV++ K G L A E F+E+ G + + +++ Y G
Sbjct: 246 MIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGN 305
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
+D L + Y + GY G A RVF+ + G+ P+
Sbjct: 306 VDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNS 365
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
LI+ AG+ A+ + M ++GL P ++L K +L++A+ L G
Sbjct: 366 LIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESG 425
Query: 376 F 376
Sbjct: 426 L 426
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/199 (19%), Positives = 81/199 (40%), Gaps = 2/199 (1%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L+E ++ YT +IHG ++ A N L M + + VT + ++ ++G
Sbjct: 421 LVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGR 480
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A E+ + G D +Y ++ A + LD L +M + + Y
Sbjct: 481 ISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTI 540
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ GY + + A +F + + PD +L NA +G + + +R
Sbjct: 541 MIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVNVIRD-- 598
Query: 341 LEPSDKCVALILSACEKEN 359
+ P + + + + C+ E+
Sbjct: 599 INPPPRVLKYLAALCKSEH 617
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 88/215 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ +E NI T ++ GY K + A A+ GF D T V + Y K G
Sbjct: 281 MVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGR 340
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ A F+E+ G + +Y S++ +AG + +++ M +
Sbjct: 341 VRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCI 400
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL G + + A +F + +G+TPD +LI+ + + +A ++M
Sbjct: 401 LLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKN 460
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
L P + ++ + +++ A L ++ G
Sbjct: 461 LVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKG 495
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 103/269 (38%), Gaps = 43/269 (15%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTL-LAMKRRGFICDQVTLTVMVVMYS--- 216
++ F N Y +I+G + ++ A N L + K + D + VVMYS
Sbjct: 133 IVNNGFSLNEVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVI 192
Query: 217 ----KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG-----------MLDRG-- 259
+ G + E + E+ G ++ +YGS++ G M+ RG
Sbjct: 193 DCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLD 252
Query: 260 ------EVLL------------REMDAQEVYVGSE----VYKALLRGYSMNGNSEGAQRV 297
VL+ REM + V G E AL+ GY + GN + A+ +
Sbjct: 253 VSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMAREL 312
Query: 298 FEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEK 357
F+AI G D + I+ Y G+ + A F M + G+ P+ ++ K
Sbjct: 313 FDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCK 372
Query: 358 ENQLNRALEFLIDLERDGFMVGKEASCTL 386
+++ A E + + R G C L
Sbjct: 373 AGEVSGAWEIVKTMHRSGLTPDIVTCCIL 401
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 112/253 (44%), Gaps = 6/253 (2%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRG-FIC--DQVTLTVMVVMYSKAG 219
E + ++ Y +I G + + Q A L+ M G + C + V+ ++ + K G
Sbjct: 155 ELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEG 214
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ A F E+ G P D +Y S++ +A +D+ +L+ M + V + Y
Sbjct: 215 EVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYN 274
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
++RGY G E A R+ + + +G+ PD +LLI Y G+ +A + F +M +
Sbjct: 275 IMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRK 334
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEV 399
G +P+ ++L + L + L + RDG A L + + G V++
Sbjct: 335 GQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKA 394
Query: 400 EHV---LREYGLR 409
+R+ GLR
Sbjct: 395 MTAFTEMRQNGLR 407
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 76/183 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + ++ Y +I G K + A L M +G + D T +M+ Y G
Sbjct: 226 MMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQ 285
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ A +++ G D +Y ++ Y + G + M + S +Y
Sbjct: 286 LEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHI 345
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL GY+ G + + + + GI + R +LI AY G KA TAF MR+ G
Sbjct: 346 LLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNG 405
Query: 341 LEP 343
L P
Sbjct: 406 LRP 408
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 101/253 (39%), Gaps = 8/253 (3%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ E NI +T +IHG + + E M RG D + + ++ K G
Sbjct: 436 MVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGR 495
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A++ F+ + +G D SY +++ Y G +D L M + + S Y +
Sbjct: 496 VVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNS 555
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA----LLINAYQMAGQSQKAYTAFQNM 336
LL GY NG E A ++ + D + CA ++++ AG+ A + M
Sbjct: 556 LLNGYFKNGRVEDALALYREM----FRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKM 611
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVV 396
G + + +L + + ++ AL DL F + + ++G +
Sbjct: 612 VDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRI 671
Query: 397 EEVEHVLREYGLR 409
+E + + LR
Sbjct: 672 DEAKSLFSAMVLR 684
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 76/195 (38%)
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
R + +I Y K + A M++ G D V+ + ++ + K G ++ A F +
Sbjct: 376 RAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQ 435
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
+ G + S+ S++ G + E L EM + ++ + ++ G
Sbjct: 436 MVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGR 495
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
AQ F+ + G+ PD LI+ Y G+ ++ M GL P
Sbjct: 496 VVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNS 555
Query: 351 ILSACEKENQLNRAL 365
+L+ K ++ AL
Sbjct: 556 LLNGYFKNGRVEDAL 570
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/204 (18%), Positives = 88/204 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +++GY K ++++A M R+ +T +M+ +AG + A E + ++
Sbjct: 553 YNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMV 612
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G L +Y +++ +D + ++ ++E + + ++ G +
Sbjct: 613 DRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRID 672
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ +F A+ G PD +L+I ++ G +++ F +M K G + +I+
Sbjct: 673 EAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIV 732
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
++ + RA +L ++ F
Sbjct: 733 RRLLEKGDVRRAGTYLTKIDEKNF 756
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 83/200 (41%), Gaps = 10/200 (5%)
Query: 153 YLQVAELALLEESFEANIRD--------YTKIIHGYGKKMQIQNAENTLLAMKRRGFICD 204
Y ++ A F++ +R Y ++HGY K + + + L M R G +
Sbjct: 315 YCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFE 374
Query: 205 QVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLR 264
+++ Y+K G + A F E++ G D SY +++ + G ++
Sbjct: 375 HRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFN 434
Query: 265 EMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRV-FEAIQFAGITPDARMCALLINAYQMA 323
+M ++ + + +L+ G G + + + FE I GI PDA +++
Sbjct: 435 QMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMIN-RGIHPDAIFMNTIMDNLCKE 493
Query: 324 GQSQKAYTAFQNMRKAGLEP 343
G+ +A F + G++P
Sbjct: 494 GRVVEAQDFFDMVIHIGVKP 513
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 56/288 (19%), Positives = 110/288 (38%), Gaps = 32/288 (11%)
Query: 50 RSGPALEAIKAEDMG-KTQVKDDTSMFTWIQIGPNITEEQKQAISQFPRKMTKRCKAFVK 108
+ G +EA DM VK D + + G + ++I Q R ++
Sbjct: 492 KEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVS-------- 543
Query: 109 QIICVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQL------------KLMEHPLY--- 153
I + P++ + LL + F R D LA+ +++ +M H L+
Sbjct: 544 --IGLRPDSWTYNSLLNGY--FKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAG 599
Query: 154 --LQVAEL--ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLT 209
+ EL +++ + I Y ++ G + + A ++ + F D T +
Sbjct: 600 RIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFS 659
Query: 210 VMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQ 269
+++ K G + A+ F + L G D +Y M+ +++ G+L+ + L M+
Sbjct: 660 IVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKN 719
Query: 270 EVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
S + ++R G+ A I + +A ALLI
Sbjct: 720 GCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKNFSLEASTAALLI 767
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 6/205 (2%)
Query: 155 QVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
+++E L+ +S NI +I+GY + ++ A M +G +VT T ++ +
Sbjct: 356 EMSEKGLVPDSVTYNI-----LINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYV 410
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
SK G +K A++ FE+I G D + +++ + G +DR +L+EMD +V
Sbjct: 411 LSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPD 470
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+ L++G G E A+ + E ++ GI PD LI+ Y G + A+
Sbjct: 471 EVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRD 530
Query: 335 NMRKAGLEPSDKCV-ALILSACEKE 358
M G P+ ALI C+ E
Sbjct: 531 EMLSIGFNPTLLTYNALIQGLCKNE 555
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 106/254 (41%), Gaps = 5/254 (1%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ E + Y +IH ++ A+ + M +G + D VT +++ Y + GN
Sbjct: 322 MVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGN 381
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+K A +E+ G + +Y S++ + G + + + L ++ + ++ ++ A
Sbjct: 382 VKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNA 441
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G+ NGN + A + + + + PD L+ G+ + A + M+ G
Sbjct: 442 LIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRG 501
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
++P ++S K + A ++ GF T A + L EE +
Sbjct: 502 IKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGF---NPTLLTYNALIQGLCKNEEGD 558
Query: 401 HVLREYGLRETYSK 414
H E L+E SK
Sbjct: 559 HA--EQLLKEMISK 570
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 104/250 (41%), Gaps = 4/250 (1%)
Query: 160 ALLEESFEANIR----DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
+LE+ E +R Y +I GY K ++ A + M R G + T +++
Sbjct: 282 GMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHAL 341
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
+ A+ +E+ G D +Y ++ Y R G + + L EM ++ +
Sbjct: 342 FLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTR 401
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
Y +L+ S G + A +FE I GI PD M LI+ + G +A+ +
Sbjct: 402 VTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKE 461
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGV 395
M + + P + ++ +E ++ A E + +++ G + TL + + + G
Sbjct: 462 MDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGD 521
Query: 396 VEEVEHVLRE 405
+++ V E
Sbjct: 522 MKDAFRVRDE 531
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 99/234 (42%), Gaps = 2/234 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y I G K+ +++ A L MK G VT ++ Y GNL+MA + +++
Sbjct: 264 YGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMV 323
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G +Y ++ A +D + +++EM + + S Y L+ GY GN +
Sbjct: 324 REGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVK 383
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV-ALI 351
A + + + GI P LI G+ ++A F+ + + G+ P ALI
Sbjct: 384 KAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALI 443
Query: 352 LSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
C N ++RA L ++++ + + TL R G VE ++ E
Sbjct: 444 DGHCANGN-MDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEE 496
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 75/173 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I+ K+ +++ A++ + R+G D + ++ + GN+ A +E+
Sbjct: 404 YTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMD 463
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ D+ ++ +++ R G ++ L+ EM ++ + Y L+ GYS G+ +
Sbjct: 464 QMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMK 523
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
A RV + + G P LI + A + M G+ P+D
Sbjct: 524 DAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPND 576
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/246 (19%), Positives = 95/246 (38%), Gaps = 35/246 (14%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
++++ + +I+ K+ +++ A+ + M+ G + VT ++ Y G ++ A
Sbjct: 187 IKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGAR 246
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F+ +K G D +YGS + + G L+ +L +M + + Y L+ GY
Sbjct: 247 MIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGY 306
Query: 286 SMNGNSE-----------------------------------GAQRVFEAIQFAGITPDA 310
GN E A + + + G+ PD+
Sbjct: 307 CNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDS 366
Query: 311 RMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLID 370
+LIN Y G +KA+T M G++P+ ++ K ++ +A +
Sbjct: 367 VTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEK 426
Query: 371 LERDGF 376
+ R G
Sbjct: 427 IVRKGI 432
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 63/137 (45%), Gaps = 2/137 (1%)
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI 301
++ M+ + G L + + + M+A + Y ++ GY G EGA+ +F+ +
Sbjct: 193 TFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLM 252
Query: 302 QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV-ALILSACEKENQ 360
+ G+ PD+ I+ G+ ++A + M++ GL P+ LI C K N
Sbjct: 253 KCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGN- 311
Query: 361 LNRALEFLIDLERDGFM 377
L A ++ + R+G M
Sbjct: 312 LEMAFDYRDKMVREGLM 328
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 57/120 (47%), Gaps = 3/120 (2%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+ ++ G ++ +++ A + MK RG D ++ ++ YSK G++K A +E+
Sbjct: 474 FNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEML 533
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+G +Y +++ + D E LL+EM ++ + Y +L+ G GN E
Sbjct: 534 SIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGI---GNVE 590
>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
Length = 1202
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 103/215 (47%), Gaps = 2/215 (0%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E ++ + ++ G K +++AEN L MK +GF+ D T +++ YS
Sbjct: 651 DNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADA 710
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG-EVLLREMDAQEVYVGSEVYKALL 282
A +E G ++ + ++ A + G +++ E+L REM A+ + +Y ++
Sbjct: 711 ALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREM-AKGLVPNEVLYNTMI 769
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
GYS G+ GA+ +A++ G+ PD LI + G + A M+ G+
Sbjct: 770 DGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVS 829
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
PS + +++ ++ + ++ + L ++E +G M
Sbjct: 830 PSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTM 864
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 86/190 (45%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y +I GYG+K + + L M+ G + + V+ ++ K L A+
Sbjct: 831 SVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVK 890
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+++ G + R Y ++ G ++ EM + + + Y L+ G SMN
Sbjct: 891 RDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMN 950
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G A+ + I G+ PD LI+ Y+ AG Q+ ++ M+ +G++P+ K
Sbjct: 951 GKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTY 1010
Query: 349 ALILSACEKE 358
L++S C KE
Sbjct: 1011 HLLISLCTKE 1020
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 109/251 (43%), Gaps = 6/251 (2%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G K Q+++AE M R + +T ++ Y K GN + + + E +K
Sbjct: 590 YNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMK 649
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
++ +++ +AGM++ E +L EM Q + + L GYS N ++
Sbjct: 650 ADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKAD 709
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A V+E +G+ +A C++L+NA GQ +KA GL P++ ++
Sbjct: 710 AALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMI 769
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLR--- 409
++ L A + +E+ G A L F LG +E E + + L+
Sbjct: 770 DGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVS 829
Query: 410 ---ETYSKIPG 417
ETY+ + G
Sbjct: 830 PSVETYNILIG 840
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 91/204 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I GY +K + A + AM+++G D + ++ + + G+++ AE+ ++K
Sbjct: 765 YNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMK 824
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
L G +Y ++ Y R D+ LL+EM+ Y L+
Sbjct: 825 LKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLL 884
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
AQ V ++ G++P+ R+ +LI+ G+ + A+ + M K G+E + ++
Sbjct: 885 EAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLI 944
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
+L A + L+++ R G
Sbjct: 945 DGLSMNGKLAEAEDMLLEISRKGL 968
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 96/230 (41%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
+++ K+ QI+ AE L +G + ++V M+ YS+ G+L A + ++ G
Sbjct: 733 LLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQG 792
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
D +Y ++ + G ++ E + +M + V E Y L+ GY +
Sbjct: 793 MKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCF 852
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
+ + ++ G P+ LIN + +A ++M G+ P+ + +++ C
Sbjct: 853 DLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGC 912
Query: 356 EKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ ++ A F ++ + G + TL G + E E +L E
Sbjct: 913 CSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLE 962
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 8/190 (4%)
Query: 155 QVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
Q+ + + + N+R Y +I G K +I++A M ++G + VT ++
Sbjct: 887 QIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDG 946
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
S G L AE+ EI G D +Y S++ Y AG + R L EM +
Sbjct: 947 LSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPT 1006
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+ Y L+ + G E +++F + + PD + +++ Y + G KA+
Sbjct: 1007 LKTYHLLISLCTKEG-IELTKKIFGEMS---LQPDLLVYNGVLHCYAVHGDMDKAF---- 1058
Query: 335 NMRKAGLEPS 344
N++K +E S
Sbjct: 1059 NLQKQMIEKS 1068
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/192 (19%), Positives = 74/192 (38%)
Query: 186 IQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGS 245
I A + A++ G +LT+++ K ++ F I K YG
Sbjct: 498 ISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 557
Query: 246 MVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAG 305
+ A V+ + +G L M + +Y L+ G + A+++F+ +
Sbjct: 558 AIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARR 617
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
+ P LI+ Y G +K++ + M+ +EPS +L K + A
Sbjct: 618 LLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAE 677
Query: 366 EFLIDLERDGFM 377
L +++ GF+
Sbjct: 678 NVLTEMKDQGFV 689
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 61/125 (48%), Gaps = 4/125 (3%)
Query: 238 LDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRV 297
LDK +Y S+++ ++ G L L+ EM A+E+ ++ Y +++G+ + GA
Sbjct: 1071 LDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMGAYVW 1130
Query: 298 FEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEK 357
+ +Q G+ D + L++ + +S++A M G + D V LSA E+
Sbjct: 1131 YREMQEKGLLLDVCIGDELVSGLKEEWRSKEAENVISEMN--GRKLGDVIVDEDLSATER 1188
Query: 358 --ENQ 360
ENQ
Sbjct: 1189 SFENQ 1193
>gi|413934035|gb|AFW68586.1| hypothetical protein ZEAMMB73_127077 [Zea mays]
Length = 800
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 101/237 (42%), Gaps = 2/237 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y +IHG K+ +A M RG + T T+++ AG LK AE
Sbjct: 210 NRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTILLSSMCNAGQLKEAENLL 269
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYV-GSEVYKALLRGYSM 287
++ G P D+ +Y + + +AG +D L + +V G + Y L+ G +
Sbjct: 270 HSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLKGYSCLIDGLFL 329
Query: 288 NGN-SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G EG Q E ++ A ++PD + ++I AG++ A+ F M++ G P
Sbjct: 330 AGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTF 389
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
C +L A L+ A + ++ R+ ++ T+ + +V+E V
Sbjct: 390 CYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQVF 446
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 86/215 (40%), Gaps = 13/215 (6%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I YT +I G K+ + A M G +T V++ +A L+ A F
Sbjct: 422 DIHTYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLF 481
Query: 229 EEIKLLGEPL-------------DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
++++ P D + +V + ++G + + LLR + V
Sbjct: 482 YKMEVGNNPSLFLRLTLGANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDV 541
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
Y LL G N +GA R+F +Q G D LI++ A + A T FQ+
Sbjct: 542 VTYNTLLNGLCKVRNLDGALRLFRELQVKGFPLDEITYGTLIDSLLRAHRYNDALTLFQD 601
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLID 370
+ +G PS ++ + + +L++A+ D
Sbjct: 602 ILHSGGTPSMPIYNSMMRSLCRMQKLSQAINLWFD 636
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 1/141 (0%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D V T+M+ ++AG A F+E+K G D Y +++ A AG LD L+
Sbjct: 352 DIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARSLM 411
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
EM V + Y ++ G + A +VF+ + G P +LI+ A
Sbjct: 412 SEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRA 471
Query: 324 GQSQKAYTAFQNMRKAGLEPS 344
+ ++A F M + G PS
Sbjct: 472 HRLEEARMLFYKM-EVGNNPS 491
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 90/238 (37%), Gaps = 19/238 (7%)
Query: 153 YLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMV 212
Y++V E + +I YT +I G + + +A MK +GF D ++
Sbjct: 340 YMEVLE----QADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLL 395
Query: 213 VMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY 272
AG+L A E+ LD +Y +M++ + ++D + M +
Sbjct: 396 KALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGMVEVGCH 455
Query: 273 VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITP--------------DARMCALLIN 318
Y L+ G E A+ +F ++ G P D+ L+
Sbjct: 456 PSVMTYNVLIDGLYRAHRLEEARMLFYKME-VGNNPSLFLRLTLGANQVRDSETLQKLVE 514
Query: 319 AYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+ +GQ KAY + + +G+ P +L+ K L+ AL +L+ GF
Sbjct: 515 SMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGF 572
>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Brachypodium distachyon]
Length = 676
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 88/196 (44%), Gaps = 1/196 (0%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
E F+ NI Y +I G KK +IQ A L +G D+VT TVM+ + K G++
Sbjct: 390 EGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITY 449
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A + F + G D +Y +++ Y + ++ + L + A E+ + Y +++
Sbjct: 450 ALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIA 509
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
GY G S A RVFE + G D+ LI+ + ++A ++ M L P
Sbjct: 510 GYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVP 569
Query: 344 SDKC-VALILSACEKE 358
+ V L C +E
Sbjct: 570 CEVTPVTLAFEYCRRE 585
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 104/237 (43%), Gaps = 1/237 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+ R + +I G + +++ + L M+ +GF D T TV+V ++ + G + E F
Sbjct: 184 DARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSELF 243
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ +G P + +Y + + + + + +L EM A+ + + +L+ G
Sbjct: 244 RRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKI 303
Query: 289 GNSEGAQRVF-EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G +E A R+F + I+ + P+ ++I Y G+ +A M + GL P+
Sbjct: 304 GWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNT 363
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
++S KE N A E + + R+GF L + G ++E VLR
Sbjct: 364 YTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLR 420
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 81/204 (39%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E+ N YT +I G+ K+ A + M+R GF + T ++ K G
Sbjct: 352 MVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGK 411
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ A + G LDK +Y M+ + + G + L M + Y
Sbjct: 412 IQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTT 471
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ Y E +Q++F+ + P + +I Y G+S A F+ M + G
Sbjct: 472 LIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNG 531
Query: 341 LEPSDKCVALILSACEKENQLNRA 364
+ ++S KE++L A
Sbjct: 532 CQADSITYGALISGLCKESRLEEA 555
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 105/254 (41%), Gaps = 3/254 (1%)
Query: 153 YLQVAEL--ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTV 210
+ V+EL +LE N+ +YT I G K+ ++ A L M +G + T T
Sbjct: 236 FRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTS 295
Query: 211 MVVMYSKAGNLKMAEETFEE-IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQ 269
++ K G + A F + IK + +Y M+ Y + G L R E+LL M Q
Sbjct: 296 LINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQ 355
Query: 270 EVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
+ + Y L+ G+ G+ A + ++ G P+ LI+ G+ Q+A
Sbjct: 356 GLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEA 415
Query: 330 YTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAW 389
Y + GL+ ++++ K+ + AL+ + +G TL A
Sbjct: 416 YKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIAR 475
Query: 390 FKRLGVVEEVEHVL 403
+ + +EE + +
Sbjct: 476 YCQQRQMEESQKLF 489
>gi|302805861|ref|XP_002984681.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
gi|300147663|gb|EFJ14326.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
Length = 651
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 115/296 (38%), Gaps = 55/296 (18%)
Query: 163 EESFEANIRDYTKIIHGYG-------------------KKMQIQNAENTLLAMKRRGFIC 203
EE F+ N+ YT +++G+ + + A + L M + G
Sbjct: 264 EEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKVSPQAGNMAKALDILEEMDKHGVSP 323
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
+++ +++ Y++ G+ A + +E++ G D Y +V A+ +AG +D+ +L
Sbjct: 324 NKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVL 383
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFA------------------- 304
++A + E Y ++L GY GN + A VF+ I+ A
Sbjct: 384 ENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKA 443
Query: 305 ----------------GITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G+ P R+ L Y G +KA+ FQ M+K L
Sbjct: 444 RQMENARLMLNEMLANGVVPSERIYTALTEGYARTGDVEKAFGVFQRMKKENLAIDIVAY 503
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCT-LAAWFKRLGVVEEVEHVL 403
+L AC ++ A E + G + CT L + R G VEE E ++
Sbjct: 504 GALLKACCNSGAMHGAAEVFQQITDAGLKHNQITYCTMLDGAYARAGRVEEAEELV 559
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 127/281 (45%), Gaps = 8/281 (2%)
Query: 101 KRCKAFVKQIICVSPETGNLS---DLLAAWVRF-MKPRRADWLAVLKQL-KLMEHPLYLQ 155
++C +F ++ VSP+ GN++ D+L + + P + + ++ + + +
Sbjct: 288 EKCLSFFHRLK-VSPQAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFK 346
Query: 156 VAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
V E ++ + +I Y ++H + K ++ A L ++ + T T ++ Y
Sbjct: 347 VWE-DMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGY 405
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
K GN++ A E F+ IK G SY S++ +A ++ ++L EM A V
Sbjct: 406 VKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPSE 465
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
+Y AL GY+ G+ E A VF+ ++ + D L+ A +G A FQ
Sbjct: 466 RIYTALTEGYARTGDVEKAFGVFQRMKKENLAIDIVAYGALLKACCNSGAMHGAAEVFQQ 525
Query: 336 MRKAGLEPSDKCVALIL-SACEKENQLNRALEFLIDLERDG 375
+ AGL+ + +L A + ++ A E + +ERDG
Sbjct: 526 ITDAGLKHNQITYCTMLDGAYARAGRVEEAEELVSAMERDG 566
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 99/238 (41%), Gaps = 19/238 (7%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + + N + II GY + AE+ K + + +V Y +AGN
Sbjct: 192 MLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGN 251
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYV-------------------RAGMLDRGEV 261
++ E +++ G + Y +++ + +AG + +
Sbjct: 252 METVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKVSPQAGNMAKALD 311
Query: 262 LLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQ 321
+L EMD V +Y ++ GY+ G+ A +V+E + AG+ PD + +L++A+
Sbjct: 312 ILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFC 371
Query: 322 MAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
AG+ KA +N+ L P+ + IL K + +ALE ++ G G
Sbjct: 372 KAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPG 429
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 82/187 (43%), Gaps = 6/187 (3%)
Query: 164 ESFEAN-----IRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
E+ EAN I YT I+ GY K IQ A +K G V+ ++ +KA
Sbjct: 384 ENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKA 443
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
++ A E+ G +R Y ++ Y R G +++ + + M + + + Y
Sbjct: 444 RQMENARLMLNEMLANGVVPSERIYTALTEGYARTGDVEKAFGVFQRMKKENLAIDIVAY 503
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDA-RMCALLINAYQMAGQSQKAYTAFQNMR 337
ALL+ +G GA VF+ I AG+ + C +L AY AG+ ++A M
Sbjct: 504 GALLKACCNSGAMHGAAEVFQQITDAGLKHNQITYCTMLDGAYARAGRVEEAEELVSAME 563
Query: 338 KAGLEPS 344
+ G +P
Sbjct: 564 RDGTKPD 570
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 76/178 (42%), Gaps = 4/178 (2%)
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
R YT + GY + ++ A MK+ D V ++ +G + A E F++
Sbjct: 466 RIYTALTEGYARTGDVEKAFGVFQRMKKENLAIDIVAYGALLKACCNSGAMHGAAEVFQQ 525
Query: 231 IKLLGEPLDKRSYGSMV-MAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
I G ++ +Y +M+ AY RAG ++ E L+ M+ + +Y +L+ Y ++G
Sbjct: 526 ITDAGLKHNQITYCTMLDGAYARAGRVEEAEELVSAMERDGTKPDTLIYNSLINAYGVSG 585
Query: 290 NSEGAQRVFEAIQFAG---ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
E + + + + PD LI Y AG +A FQ + + L P
Sbjct: 586 RHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPRAEELFQGLARLKLVPD 643
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 127/329 (38%), Gaps = 48/329 (14%)
Query: 116 ETGNLSDLLAAWVRF---MKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRD 172
E G+ SD AA RF M+ +W ++ ++++ P+ +R+
Sbjct: 92 EYGDCSDEPAAQ-RFRETMEIDAGNWHKIVNAFQVIDKPV-----------------LRE 133
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ Y + A T AM+ + T ++ Y++A +++ A EE+
Sbjct: 134 YGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEML 193
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G L++ + S++ Y AG + E + A+ + G VY ++++ Y GN E
Sbjct: 194 SQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNME 253
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQ-------------------MAGQSQKAYTAF 333
+ + ++ G + + ++N + AG KA
Sbjct: 254 TVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKVSPQAGNMAKALDIL 313
Query: 334 QNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG-------FMVGKEASCTL 386
+ M K G+ P+ A+I+ + A + D+ G + + A C
Sbjct: 314 EEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKA 373
Query: 387 AAWFKRLGVVEEVEHVLREYGLRETYSKI 415
K LGV+E +E R ETY+ I
Sbjct: 374 GRMDKALGVLENIE-ANRLLPTIETYTSI 401
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 78/171 (45%), Gaps = 1/171 (0%)
Query: 170 IRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFE 229
+ Y ++ G K Q++NA L M G + + T + Y++ G+++ A F+
Sbjct: 430 VVSYNSLLSGLAKARQMENARLMLNEMLANGVVPSERIYTALTEGYARTGDVEKAFGVFQ 489
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG-YSMN 288
+K +D +YG+++ A +G + + +++ + Y +L G Y+
Sbjct: 490 RMKKENLAIDIVAYGALLKACCNSGAMHGAAEVFQQITDAGLKHNQITYCTMLDGAYARA 549
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
G E A+ + A++ G PD + LINAY ++G+ + M K+
Sbjct: 550 GRVEEAEELVSAMERDGTKPDTLIYNSLINAYGVSGRHEDMEALLAKMVKS 600
>gi|115489794|ref|NP_001067384.1| Os12g0638900 [Oryza sativa Japonica Group]
gi|77556813|gb|ABA99609.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113649891|dbj|BAF30403.1| Os12g0638900 [Oryza sativa Japonica Group]
gi|125580213|gb|EAZ21359.1| hypothetical protein OsJ_37016 [Oryza sativa Japonica Group]
Length = 859
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 6/204 (2%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
LY ++ E+ L ++F Y+ +++ GK + A M G + VT +M
Sbjct: 458 LYTRMQEVGLSPDTFT-----YSAMVNCLGKGGHLAAAYKLFCEMVENGCTPNLVTYNIM 512
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ + +KA N + + ++++++ G DK +Y ++ G LD E + EM +
Sbjct: 513 IALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMR-HDW 571
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
VY L+ + GN + A + A+ G+ P+ C L++A+ + Q AY+
Sbjct: 572 APDEPVYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAYS 631
Query: 332 AFQNMRKAGLEPSDKCVALILSAC 355
QNM GL PS + L+LS C
Sbjct: 632 VLQNMLAQGLVPSLQTYTLLLSCC 655
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 101/233 (43%), Gaps = 1/233 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +IIH YG+ ++ A M++ G+ D+VT ++ +++K G L+ A + + ++
Sbjct: 404 YNRIIHAYGRANYLREAVKVFEEMQKAGYEPDRVTYCTLIDIHAKGGYLEFAMDLYTRMQ 463
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+G D +Y +MV + G L L EM Y ++ + N E
Sbjct: 464 EVGLSPDTFTYSAMVNCLGKGGHLAAAYKLFCEMVENGCTPNLVTYNIMIALQAKARNYE 523
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
++++ +Q AG PD ++++ G +A F MR P + L++
Sbjct: 524 NVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRH-DWAPDEPVYGLLV 582
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
K +++AL + + +DG +L + F ++ ++ VL+
Sbjct: 583 DLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAYSVLQN 635
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/228 (19%), Positives = 91/228 (39%)
Query: 147 LMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQV 206
L +H + L + + F+ + YT +I G+ Q L M V
Sbjct: 343 LHDHTIALGFFQWLKRQPGFKHDGHSYTTMIGILGQARQFGTMRKLLDEMNSVHCKPTVV 402
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
T ++ Y +A L+ A + FEE++ G D+ +Y +++ + + G L+ L M
Sbjct: 403 TYNRIIHAYGRANYLREAVKVFEEMQKAGYEPDRVTYCTLIDIHAKGGYLEFAMDLYTRM 462
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
+ + Y A++ G+ A ++F + G TP+ ++I A
Sbjct: 463 QEVGLSPDTFTYSAMVNCLGKGGHLAAAYKLFCEMVENGCTPNLVTYNIMIALQAKARNY 522
Query: 327 QKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
+ +++M+ AG P ++++ L+ A I++ D
Sbjct: 523 ENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRHD 570
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 82/211 (38%), Gaps = 1/211 (0%)
Query: 196 MKRR-GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG 254
+KR+ GF D + T M+ + +A + +E+ + +Y ++ AY RA
Sbjct: 356 LKRQPGFKHDGHSYTTMIGILGQARQFGTMRKLLDEMNSVHCKPTVVTYNRIIHAYGRAN 415
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
L + EM Y L+ ++ G E A ++ +Q G++PD +
Sbjct: 416 YLREAVKVFEEMQKAGYEPDRVTYCTLIDIHAKGGYLEFAMDLYTRMQEVGLSPDTFTYS 475
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
++N G AY F M + G P+ ++++ K ++ D++
Sbjct: 476 AMVNCLGKGGHLAAAYKLFCEMVENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVA 535
Query: 375 GFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
GF K + G ++E E V E
Sbjct: 536 GFRPDKITYSIVMEVLGHCGHLDEAEAVFIE 566
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 2/200 (1%)
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
T +++ + G L+ F E++ G + +Y +++ AY + G +D LL+ M
Sbjct: 216 TYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSM 275
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
++ + Y ++ G G+ + A + E + + G TPD L+N Y G
Sbjct: 276 SSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNF 335
Query: 327 QKAYTAFQNMRKAGLEPSDKC-VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCT 385
+A M + G+ PS ALI S C+ N LNRA+EF + G + T
Sbjct: 336 HQALVIHAEMVRNGVSPSVVTYTALINSMCKARN-LNRAMEFFDQMRIRGLRPNERTYTT 394
Query: 386 LAAWFKRLGVVEEVEHVLRE 405
L F R G++ E +L E
Sbjct: 395 LIDGFSRQGLLNEAYRILNE 414
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 96/238 (40%), Gaps = 7/238 (2%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I G+ ++Q M+R G + + VT ++ Y K G + A
Sbjct: 213 NVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLL 272
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ + G + SY ++ R G + +L EM + Y LL GY
Sbjct: 273 KSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKE 332
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
GN A + + G++P LIN+ A +A F MR GL P+++
Sbjct: 333 GNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTY 392
Query: 349 ALILSACEKENQLNRALEFLIDLERDGF---MVGKEA----SCTLAAWFKRLGVVEEV 399
++ ++ LN A L ++ GF +V A C L + LGVV+E+
Sbjct: 393 TTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEM 450
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 1/185 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +++GY K+ A M R G VT T ++ KA NL A E F++++
Sbjct: 322 YNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMR 381
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ G ++R+Y +++ + R G+L+ +L EM Y A + G+ + E
Sbjct: 382 IRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERME 441
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV-ALI 351
A V + + G+ PD + +I+ + G+ +A+ Q M + G+ P +LI
Sbjct: 442 EALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLI 501
Query: 352 LSACE 356
CE
Sbjct: 502 QGLCE 506
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 88/200 (44%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
+ N+ Y II+G ++ ++ A L M +GF D+VT ++ Y K GN A
Sbjct: 281 QPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALV 340
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
E+ G +Y +++ + +A L+R +M + + Y L+ G+S
Sbjct: 341 IHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFS 400
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G A R+ + +G +P I+ + + + ++A Q M + GL P
Sbjct: 401 RQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVV 460
Query: 347 CVALILSACEKENQLNRALE 366
+ I+S ++ +L+RA +
Sbjct: 461 SYSTIISGFCRKGELDRAFQ 480
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 117/295 (39%), Gaps = 50/295 (16%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E+ ++ Y+ II G+ +K ++ A M +G D VT + ++ +
Sbjct: 450 MVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRR 509
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG-------------------EV 261
L A + +E+ +G P D+ +Y +++ AY G L++ V
Sbjct: 510 LTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSV 569
Query: 262 LLREMDAQ---------------EVYVGSEV-------------YK---ALLRGYSMNGN 290
L+ ++ Q E V S+V +K AL++G+ M G
Sbjct: 570 LINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGL 629
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
A RVFE++ P + ++I+ + G KA+ ++ M +G P V
Sbjct: 630 MHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVIT 689
Query: 351 ILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A KE E + D R + E + L + G +E V +VL +
Sbjct: 690 LIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEINHKEGNMEAVLNVLTD 744
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 94/222 (42%), Gaps = 3/222 (1%)
Query: 157 AELALLEESFEANIRD---YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVV 213
AEL L + + + D Y+ +IHGY +++ A MK+RG I + VT +
Sbjct: 319 AELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLA 378
Query: 214 MYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYV 273
K G K A E F+ + G D SY +++ Y G L M + +
Sbjct: 379 SLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAA 438
Query: 274 GSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAF 333
V+ L+ Y+ G + A +F +Q G++PD + +I+ + G+ A F
Sbjct: 439 NCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKF 498
Query: 334 QNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
M G++P+ + I+ L +A E + ++ G
Sbjct: 499 NQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKG 540
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 1/209 (0%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
AN +T +IH Y K+ + +A M+++G D VT + ++ +S+ G L A E
Sbjct: 438 ANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEK 497
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY-KALLRGYS 286
F ++ G + Y S++ + G L + + L+ EM + + V+ +++
Sbjct: 498 FNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLC 557
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
+G A +F+ G P LI+ Y + G+ KA+ M G+EP
Sbjct: 558 KDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIV 617
Query: 347 CVALILSACEKENQLNRALEFLIDLERDG 375
+L K ++N L +++R G
Sbjct: 618 TYNTLLDGYFKNGRINDGLTLFREMQRKG 646
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 90/222 (40%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +IHG+ + + A + M R+G D VT +++ KA + AE ++
Sbjct: 268 YSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMT 327
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y M+ Y G L + REM + + + L +G S+
Sbjct: 328 TDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSK 387
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A F+++ G PD L++ Y G F +M+ G+ + +++
Sbjct: 388 EAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILI 447
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
A K ++ A+ ++++ G T+ + F R+G
Sbjct: 448 HAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMG 489
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 100/234 (42%), Gaps = 4/234 (1%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E +I Y ++ GY K +I + M+R+G + VT +M+ +AG A +
Sbjct: 613 EPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARK 672
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
F E+ G + YG ++ R D +L +++ V + ++
Sbjct: 673 KFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMY 732
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
E A+ +F I +G+ P+ ++I G + A F +M K+G+ P +
Sbjct: 733 KVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSR 792
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCT--LAAWFKRLGVVEE 398
+ I+ ++ ++ +A +L + DG + EAS T + + F R G +E
Sbjct: 793 LLNRIIRMLLEKGEIAKAGNYLSKV--DGKRILLEASTTSLMLSLFSRKGKYQE 844
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 96/239 (40%), Gaps = 2/239 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFIC--DQVTLTVMVVMYSKAGNLKMAEE 226
N Y+ ++ Q A + L M ++G C D V + ++ + G A
Sbjct: 227 NAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACS 286
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
F E+ G D +Y ++ A +A +D+ E++LR+M + Y ++ GY+
Sbjct: 287 LFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYA 346
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G + A ++F ++ G+ P+ C + + G+S++A F +M G +P
Sbjct: 347 TLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIF 406
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+L E + ++ +G L + + G+V++ + E
Sbjct: 407 SYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTE 465
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 88/210 (41%), Gaps = 9/210 (4%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFI-CDQVTLTVMVVMYSKAG 219
++ + N Y+ II G+ + A+ + M +G D V + ++ K G
Sbjct: 501 MVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDG 560
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE--- 276
+ A + F+ +GE ++ S++ Y G +D+ + +DA EV VG E
Sbjct: 561 RVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKA---FKILDAMEV-VGVEPDI 616
Query: 277 -VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
Y LL GY NG +F +Q G+ P+ +++ AG++ A F
Sbjct: 617 VTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHE 676
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRAL 365
M ++G + +IL + N + A+
Sbjct: 677 MIESGTTVTVSIYGIILGGLCRNNCADEAI 706
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 83/207 (40%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+ +I GY ++ A L AM+ G D VT ++ Y K G + F E++
Sbjct: 584 FNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQ 643
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +YG M+ RAG EM V +Y +L G N ++
Sbjct: 644 RKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCAD 703
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +F+ + + + +INA + ++A F + +GL P++ +++
Sbjct: 704 EAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMI 763
Query: 353 SACEKENQLNRALEFLIDLERDGFMVG 379
K+ + A +E+ G + G
Sbjct: 764 INLLKDGGVEDANNMFSSMEKSGIVPG 790
>gi|449436321|ref|XP_004135941.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Cucumis sativus]
gi|449514880|ref|XP_004164505.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Cucumis sativus]
Length = 477
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 107/236 (45%), Gaps = 1/236 (0%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAM-KRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
N Y II+G+GK + E+ LL M + D +T + Y + ++ E+
Sbjct: 231 CNTVTYNTIINGFGKAKMFEQMESLLLEMIESDSCPPDLITFNTFIRAYGNSEQIEKMEK 290
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
++E +L+G D +Y SM+ +Y +AGM D+ + +L M+ + ++ +
Sbjct: 291 WYKEFQLMGIEPDIWTYNSMISSYGKAGMYDKMKSVLNFMEKRFFSPTIVTMNTIIDSFG 350
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
GN E + F+ ++F G+ P++ L+NAY +G +K + + + + + P
Sbjct: 351 RAGNIEEMEEYFKNMKFQGMKPNSVTYCSLVNAYGKSGDLEKVDSILRQIENSDVVPDTP 410
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
+++ + + + E ++++ + + T+ K G+ E+ + +
Sbjct: 411 LFNCLINVYGQAGNVRKMGELFLEMKENKCVPDGITFATMIRALKAQGMTEDAQRL 466
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 82/163 (50%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E +I Y +I YGK ++ L M++R F VT+ ++ + +AGN++ EE
Sbjct: 301 EPDIWTYNSMISSYGKAGMYDKMKSVLNFMEKRFFSPTIVTMNTIIDSFGRAGNIEEMEE 360
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
F+ +K G + +Y S+V AY ++G L++ + +LR+++ +V + ++ L+ Y
Sbjct: 361 YFKNMKFQGMKPNSVTYCSLVNAYGKSGDLEKVDSILRQIENSDVVPDTPLFNCLINVYG 420
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
GN +F ++ PD A +I A + G ++ A
Sbjct: 421 QAGNVRKMGELFLEMKENKCVPDGITFATMIRALKAQGMTEDA 463
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 124/283 (43%), Gaps = 10/283 (3%)
Query: 129 RFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQN 188
++ +PR + +L L + P + + E + +I YT ++ YG+ +
Sbjct: 121 QWYEPRCQTYTKLLMLLGKCKQPEQASLLFEIMFSEGLKPSIDVYTALVSAYGQSGLLHK 180
Query: 189 AENTLLAMKRRGFIC--DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSM 246
A +T+ MK C D T ++++ ++ + ++ ++ LG + +Y ++
Sbjct: 181 AISTVDEMKSIS-DCKPDVHTYSILIDCCTRLRRFDLLKKILADMSCLGITCNTVTYNTI 239
Query: 247 VMAYVRAGMLDRGEVLLREM-DAQEVYVGSEVYKALLRGYSMNGNSEGAQRV---FEAIQ 302
+ + +A M ++ E LL EM ++ + +R Y GNSE +++ ++ Q
Sbjct: 240 INGFGKAKMFEQMESLLLEMIESDSCPPDLITFNTFIRAY---GNSEQIEKMEKWYKEFQ 296
Query: 303 FAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLN 362
GI PD +I++Y AG K + M K P+ + I+ + + +
Sbjct: 297 LMGIEPDIWTYNSMISSYGKAGMYDKMKSVLNFMEKRFFSPTIVTMNTIIDSFGRAGNIE 356
Query: 363 RALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
E+ +++ G C+L + + G +E+V+ +LR+
Sbjct: 357 EMEEYFKNMKFQGMKPNSVTYCSLVNAYGKSGDLEKVDSILRQ 399
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 55/132 (41%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F I II +G+ I+ E MK +G + VT +V Y K+G+L+ +
Sbjct: 335 FSPTIVTMNTIIDSFGRAGNIEEMEEYFKNMKFQGMKPNSVTYCSLVNAYGKSGDLEKVD 394
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+I+ D + ++ Y +AG + + L EM + + ++R
Sbjct: 395 SILRQIENSDVVPDTPLFNCLINVYGQAGNVRKMGELFLEMKENKCVPDGITFATMIRAL 454
Query: 286 SMNGNSEGAQRV 297
G +E AQR+
Sbjct: 455 KAQGMTEDAQRL 466
>gi|255661182|gb|ACU25760.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 426
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 104/218 (47%), Gaps = 4/218 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y +I YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 213 KNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDR 272
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ + +M++AY RAG++ + LL E+ + + + +L
Sbjct: 273 AAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDTAIHILA 331
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + F MR G P
Sbjct: 332 G---AGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYANVVEVFDKMRGLGYFP 388
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKE 381
+A++L+A K ++ ++A + ++++ G + E
Sbjct: 389 DSNVIAIVLNAYGKLHEFDKANDVYMEMQEVGCVFSDE 426
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 102/237 (43%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 113 NTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 172
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 173 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKT 232
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G+E
Sbjct: 233 LEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILF 292
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE +V R+
Sbjct: 293 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAG----AGRIEEATYVFRQ 345
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 98/236 (41%), Gaps = 6/236 (2%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I +GK + A + + MK G I + + + ++ MY + A F E++
Sbjct: 82 YNAMIIVFGKAKLFREARSLISEMKTAGVIPNTTSYSTLLTMYVENKKFLEALSVFSEMR 141
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ LD + M+ Y + GM + L M + Y LLR Y G++E
Sbjct: 142 EIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY---GDAE 198
Query: 293 ---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
A +F +Q I + +I Y + +KA Q M+ G+EP+ +
Sbjct: 199 LFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYS 258
Query: 350 LILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
I+S K +L+RA L G + + T+ ++R G+V + +L E
Sbjct: 259 TIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHE 314
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ A + L M++ D V + ++ + K + A F +K
Sbjct: 12 YSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 71
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +M++ + +A + L+ EM V + Y LL Y N
Sbjct: 72 NSGYTPDLVAYNAMIIVFGKAKLFREARSLISEMKTAGVIPNTTSYSTLLTMYVENKKFL 131
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF ++ D C ++I+ Y G +++A F MRK G+EP+
Sbjct: 132 EALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%)
Query: 170 IRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFE 229
I Y ++ G ++ +++ A+ + M G D VT T++V K G+L MA+E F+
Sbjct: 409 IVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFD 468
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
E+ G LD +Y + ++ ++ G R L EM A+ +Y ++ G G
Sbjct: 469 EMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLG 528
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
N E A + + + G+ PD +I+A+ G+ +K F M GL PS
Sbjct: 529 NLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYT 588
Query: 350 LILSACEKENQLNRALEFLIDLERDGFM 377
+++ + +L RA + +++ G +
Sbjct: 589 VLIHGHAGKGRLERAFIYFSEMQEKGIL 616
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 83/213 (38%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E + I Y ++ Y K ++Q + L M+RRG + VT V++ SK G +
Sbjct: 227 EFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFE 286
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A+ E+ G + +Y ++ Y GML L EM + Y + +
Sbjct: 287 QAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFI 346
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G G A + + + PD LI Y G KA+ F +R L
Sbjct: 347 YGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLF 406
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDG 375
P+ +L ++ +L A + +++ +G
Sbjct: 407 PTIVTYNTLLDGLCRQGELEVAQQLKVEMINEG 439
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 92/245 (37%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L+ + + Y +I+GY K + A + M +G T + K G
Sbjct: 295 MLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGR 354
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + ++ D SY +++ Y R G L + +L E+ + ++ Y
Sbjct: 355 MSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNT 414
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL G G E AQ++ + GI PD +L+N G A F M G
Sbjct: 415 LLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEG 474
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
LE A + K +RA ++ GF + +LG +EE
Sbjct: 475 LELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEAS 534
Query: 401 HVLRE 405
+L++
Sbjct: 535 ELLQK 539
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 85/222 (38%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+G KK + + A+ + M + G T ++ Y G L A EE+
Sbjct: 272 YNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMV 331
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
L G +Y S + + G + L +M A + Y L+ GY GN
Sbjct: 332 LKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLM 391
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +F+ ++ + P L++ G+ + A M G+ P +++
Sbjct: 392 KAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILV 451
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
+ K L+ A EF ++ +G + A T +LG
Sbjct: 452 NGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLG 493
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 61/138 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT IIH + + +++ M +G VT TV++ ++ G L+ A F E++
Sbjct: 552 YTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQ 611
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +Y S++ + +D+ EM + ++ Y L+ GN +
Sbjct: 612 EKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQ 671
Query: 293 GAQRVFEAIQFAGITPDA 310
A +++ + G+ PD+
Sbjct: 672 EALSLYKQMLDRGVQPDS 689
>gi|297823043|ref|XP_002879404.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325243|gb|EFH55663.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 100/239 (41%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y II+ Y K E L MK+ G + ++VT T+++ + K G + E+ F+E++
Sbjct: 243 YNTIINAYLKHRDFSGVEKILKVMKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEMR 302
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D Y S++ R G + R +L E+ + + S Y AL+ G G
Sbjct: 303 ERGIESDIHVYTSLISWNCRKGNIKRAFLLFDELTEKGLLPSSHTYGALIDGVCKVGEMG 362
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ + +Q G+ + LIN Y G +A + M K G + I
Sbjct: 363 AAEILMNEMQSKGVNITQVVFNTLINGYCRKGMIDEASMIYDVMEKKGFQADVFTCNTIA 422
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRET 411
S + + + A ++L + G + + L + + G VEE + + E +E
Sbjct: 423 SCFNRLKRYDEAKQWLFRMMEGGVRLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEV 481
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 95/214 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+ +I+GY +K I A M+++GF D T + +++ A++ +
Sbjct: 383 FNTLINGYCRKGMIDEASMIYDVMEKKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMM 442
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G L SY +++ Y + G ++ + L EM ++EV + Y ++ Y G +
Sbjct: 443 EGGVRLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQGKVK 502
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A++++ ++ G+ PD+ LI+ +A +A F M GL+ + +++
Sbjct: 503 EARKLWANMKANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMI 562
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
S K + + A +++R G+ + + L
Sbjct: 563 SGLSKAGKSDEAFGLYDEIKRKGYTIDNKVYTAL 596
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 86/192 (44%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
++ F+A++ I + + + A+ L M G V+ T ++ +Y K GN++
Sbjct: 408 KKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVRLSTVSYTNLIDVYCKEGNVE 467
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A+ F E+ + +Y M+ AY + G + L M A + S Y +L+
Sbjct: 468 EAKRLFVEMSSKEVQPNAITYNVMIYAYCKQGKVKEARKLWANMKANGMDPDSYTYTSLI 527
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G + N + A R+F + G+ ++ ++I+ AG+S +A+ + +++ G
Sbjct: 528 HGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEIKRKGYT 587
Query: 343 PSDKCVALILSA 354
+K ++ +
Sbjct: 588 IDNKVYTALIGS 599
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 6/209 (2%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
L+ ++ E LL S Y +I G K ++ AE + M+ +G QV +
Sbjct: 332 LFDELTEKGLLPSS-----HTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTL 386
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ Y + G + A ++ ++ G D + ++ + R D + L M V
Sbjct: 387 INGYCRKGMIDEASMIYDVMEKKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGV 446
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
+ + Y L+ Y GN E A+R+F + + P+A ++I AY G+ ++A
Sbjct: 447 RLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQGKVKEARK 506
Query: 332 AFQNMRKAGLEP-SDKCVALILSACEKEN 359
+ NM+ G++P S +LI C +N
Sbjct: 507 LWANMKANGMDPDSYTYTSLIHGECIADN 535
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/215 (17%), Positives = 83/215 (38%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
EE FE + + + Y + M ++G D+ + V +V K +
Sbjct: 128 EEKFEFWEKFFDLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRID 187
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
+ E F + G + S +V R G +++ + L++E + + + Y ++
Sbjct: 188 LCLEFFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSGKGIKPEAYTYNTII 247
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
Y + + G +++ + ++ G+ + LLI G+ F MR+ G+E
Sbjct: 248 NAYLKHRDFSGVEKILKVMKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEMRERGIE 307
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
++S ++ + RA +L G +
Sbjct: 308 SDIHVYTSLISWNCRKGNIKRAFLLFDELTEKGLL 342
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 2/200 (1%)
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
T +++ + G L+ F E++ G + +Y +++ AY + G +D LL+ M
Sbjct: 12 TYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSM 71
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
++ + Y ++ G G+ + A + E + + G TPD L+N Y G
Sbjct: 72 SSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNF 131
Query: 327 QKAYTAFQNMRKAGLEPSDKC-VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCT 385
+A M + G+ PS ALI S C+ N LNRA+EF + G + T
Sbjct: 132 HQALVIHAEMVRNGVSPSVVTYTALINSMCKARN-LNRAMEFFDQMRIRGLRPNERTYTT 190
Query: 386 LAAWFKRLGVVEEVEHVLRE 405
L F R G++ E +L E
Sbjct: 191 LIDGFSRQGLLNEAYRILNE 210
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 93/238 (39%), Gaps = 7/238 (2%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I G+ ++Q M+R G + + VT ++ Y K G + A
Sbjct: 9 NVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLL 68
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ + G + SY ++ R G + +L EM + Y LL GY
Sbjct: 69 KSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKE 128
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
GN A + + G++P LIN+ A +A F MR GL P+++
Sbjct: 129 GNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTY 188
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGK-------EASCTLAAWFKRLGVVEEV 399
++ ++ LN A L ++ GF C L + LGVV+E+
Sbjct: 189 TTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEM 246
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 1/185 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +++GY K+ A M R G VT T ++ KA NL A E F++++
Sbjct: 118 YNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMR 177
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ G ++R+Y +++ + R G+L+ +L EM Y A + G+ + E
Sbjct: 178 IRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERME 237
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV-ALI 351
A V + + G+ PD + +I+ + G+ +A+ Q M + G+ P +LI
Sbjct: 238 EALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLI 297
Query: 352 LSACE 356
CE
Sbjct: 298 QGLCE 302
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 91/207 (43%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
++ + + N+ Y II+G ++ ++ A L M +GF D+VT ++ Y K G
Sbjct: 70 SMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEG 129
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
N A E+ G +Y +++ + +A L+R +M + + Y
Sbjct: 130 NFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYT 189
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ G+S G A R+ + +G +P I+ + + + ++A Q M +
Sbjct: 190 TLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEK 249
Query: 340 GLEPSDKCVALILSACEKENQLNRALE 366
GL P + I+S ++ +L+RA +
Sbjct: 250 GLAPDVVSYSTIISGFCRKGELDRAFQ 276
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 122/309 (39%), Gaps = 53/309 (17%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E+ ++ Y+ II G+ +K ++ A M +G D VT + ++ +
Sbjct: 246 MVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRR 305
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG-------------------EV 261
L A + +E+ +G P D+ +Y +++ AY G L++ V
Sbjct: 306 LTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSV 365
Query: 262 LLREMDAQ---------------EVYVGSEV-------------YK---ALLRGYSMNGN 290
L+ ++ Q E V S+V +K AL++G+ M G
Sbjct: 366 LINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGL 425
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
A RVFE++ P + ++I+ + G KA+ ++ M +G P V
Sbjct: 426 MHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVIT 485
Query: 351 ILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYG--- 407
++ A KE E + D R + E + L + G +E V +V R Y
Sbjct: 486 LIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEINHKEGNMEAVLNVSRLYNKLS 545
Query: 408 LRETYSKIP 416
L+ S +P
Sbjct: 546 LKCVASSVP 554
>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+T +I + K+ + + M+ RG + D V +V +A NLK AE EE+K
Sbjct: 293 FTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMK 352
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G DK +Y +++ + G LD + ++M +EV + Y AL+ G S G
Sbjct: 353 NAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPV 412
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+RV + A + PD ++I+A+ G + + + M+ G +P +I+
Sbjct: 413 DAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIM 472
Query: 353 SACEKENQLNRA 364
+ K Q+ A
Sbjct: 473 NGLCKLGQMKNA 484
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 109/256 (42%), Gaps = 10/256 (3%)
Query: 152 LYLQVAELALLEES--FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLT 209
YLQ+ + + E+ F +RD+ ++ ++ +A M RR VT
Sbjct: 173 FYLQLLDAGMAPETRLFNVLMRDFVRL-------GELVSARKVFDEM-RRSVQPTVVTFN 224
Query: 210 VMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQ 269
++ +A +L + ++E+ +G D +YG+++ + R G ++ + EM
Sbjct: 225 TLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDT 284
Query: 270 EVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
V + V+ L+ + GN +++ ++ G+ PD L+N A + A
Sbjct: 285 GVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAA 344
Query: 330 YTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAW 389
+ + M+ AGL+P ++ C K+ +L+ A++ + + + L +
Sbjct: 345 ESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISG 404
Query: 390 FKRLGVVEEVEHVLRE 405
+ G + E VLRE
Sbjct: 405 LSKAGRPVDAERVLRE 420
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/236 (19%), Positives = 101/236 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y +I G+ + +++NA M+ G + V T ++ + K GN+ + +
Sbjct: 254 DVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLY 313
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+++++ G D +Y ++V RA L E ++ EM + Y L+ G +
Sbjct: 314 QDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKD 373
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A + + + ++ D LI+ AG+ A + M +A LEP +
Sbjct: 374 GKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTY 433
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
+++ A ++ + + L +++ G G + +LG ++ + +L
Sbjct: 434 TMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLH 489
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 85/195 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +++G + ++ AE+ + MK G D+VT T ++ K G L MA + +++
Sbjct: 328 YNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMA 387
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
LD+ +Y +++ +AG E +LREM + + Y ++ + G+ +
Sbjct: 388 EKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVK 447
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
++ + +Q G P +++N GQ + A M G+ P D ++L
Sbjct: 448 TGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILL 507
Query: 353 SACEKENQLNRALEF 367
K ++ + E
Sbjct: 508 DGQCKHGKVANSEEL 522
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 7/206 (3%)
Query: 146 KLMEHPLYLQ---VAELALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKR 198
L+ H L++ L+EE ++ Y +I+G+ K+ ++ A M R
Sbjct: 625 NLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSR 684
Query: 199 RGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDR 258
RG VT T ++ SK G ++ ++ F+E G D Y +++ ++ +G +DR
Sbjct: 685 RGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDR 744
Query: 259 GEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLIN 318
++ EM+ + + Y L+RG + G + A+++ + + GI PD LI+
Sbjct: 745 AFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLIS 804
Query: 319 AYQMAGQSQKAYTAFQNMRKAGLEPS 344
Y M G + A M G P+
Sbjct: 805 GYSMKGDVKDALRIRNEMMNKGFNPT 830
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 2/199 (1%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
A + YT +I+ KK Q+Q + RRG D V ++ +S +GN+ A E
Sbjct: 689 ATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEI 748
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
E++ D +Y +++ G +D L+ EM + + Y L+ GYSM
Sbjct: 749 MGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSM 808
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G+ + A R+ + G P LI GQ A + M + G+ P D
Sbjct: 809 KGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDST 868
Query: 348 VALILSACEKENQLNRALE 366
++ E++ RA++
Sbjct: 869 YISLIEGLTTEDE--RAID 885
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 95/220 (43%), Gaps = 2/220 (0%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFIC-DQVTLTVMVVMYSK 217
L LL + N Y +I G+ + ++Q A + + M+ RG I +Q T ++ + K
Sbjct: 503 LELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCK 562
Query: 218 AGNLKMAEETFEEIKLLGE-PLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
G + A + F+E+ GE + Y +++ Y G LD + M + V +
Sbjct: 563 VGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVA 622
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
Y L+ M+G A + E + G+ PD +LIN + G +KA F+NM
Sbjct: 623 TYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENM 682
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+ G+ + ++ A K+ Q+ + + R G
Sbjct: 683 SRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGI 722
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 68/173 (39%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I GY + ++ A M RG T ++V G A E EE+
Sbjct: 589 YNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMG 648
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y ++ + + G + + + M + V Y AL+ S G +
Sbjct: 649 GKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQ 708
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
++F+ GI PD + LIN++ +G +A+ M K + P D
Sbjct: 709 ETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDD 761
>gi|297834714|ref|XP_002885239.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
gi|297331079|gb|EFH61498.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
Length = 1429
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 99/208 (47%), Gaps = 1/208 (0%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F + Y +++ + ++ + + M++ GF D++T ++ MY K G L +A
Sbjct: 363 FSPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLAL 422
Query: 226 ETFEEIK-LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
+ ++++K L G D +Y ++ + +A L+ EM + + Y AL+ G
Sbjct: 423 QLYKDMKGLSGRNPDAITYTVLIDSLGKANRSVEAAALMSEMLDVGIKPTLQTYSALICG 482
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
Y+ G E A+ F + +G PD +++++ +++KA+ +++M G PS
Sbjct: 483 YAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWVLYRDMISDGHTPS 542
Query: 345 DKCVALILSACEKENQLNRALEFLIDLE 372
L++ KEN+ + + + D+E
Sbjct: 543 HSLYELMILGLMKENRSDDVQKTIRDME 570
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 94/205 (45%), Gaps = 2/205 (0%)
Query: 170 IRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL--KMAEET 227
++ Y ++ Y + + A+ L AM++RG + D ++ ++ K+G L + E
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELLDAMRQRGCVPDLISFNTLINARLKSGGLTPNLVVEL 284
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
+ ++ G D +Y +++ A R L+ + +M+A Y A++ Y
Sbjct: 285 LDMVRNSGLRPDAITYNTLLSACSRDSNLEGAVKVFEDMEAHRCQPDLWTYNAMISVYGR 344
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G + A+R+F ++ G +PDA L+ A+ ++K +Q M+K G +
Sbjct: 345 CGLAAEAERLFIELELKGFSPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMT 404
Query: 348 VALILSACEKENQLNRALEFLIDLE 372
I+ K+ QL+ AL+ D++
Sbjct: 405 YNTIIHMYGKQGQLDLALQLYKDMK 429
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/236 (19%), Positives = 106/236 (44%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+ K++H +++ + ++ GF + ++ +M+ +++AGN+ + +
Sbjct: 821 TVESINKLLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVNKIY 880
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+K G R Y M+ + + E+++ EM+ V ++ ++L+ Y++
Sbjct: 881 SSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTVI 940
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
+ + +V++ I+ +G+ PD LI Y + ++ Y+ Q MR GL+P
Sbjct: 941 EDYKKTVQVYQRIKESGLEPDETTYNTLIIMYCRDRRPEEGYSLMQQMRNLGLDPKLDTY 1000
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
++SA K+ L +A + +L G + + T+ + G + E +L+
Sbjct: 1001 KSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQ 1056
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 91/213 (42%), Gaps = 2/213 (0%)
Query: 193 LLAMKRR-GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYV 251
LL M R G D +T ++ S+ NL+ A + FE+++ D +Y +M+ Y
Sbjct: 284 LLDMVRNSGLRPDAITYNTLLSACSRDSNLEGAVKVFEDMEAHRCQPDLWTYNAMISVYG 343
Query: 252 RAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDAR 311
R G+ E L E++ + + Y +LL ++ N+E + V++ +Q G D
Sbjct: 344 RCGLAAEAERLFIELELKGFSPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEM 403
Query: 312 MCALLINAYQMAGQSQKAYTAFQNMRK-AGLEPSDKCVALILSACEKENQLNRALEFLID 370
+I+ Y GQ A +++M+ +G P +++ + K N+ A + +
Sbjct: 404 TYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRSVEAAALMSE 463
Query: 371 LERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+ G + L + + G EE E
Sbjct: 464 MLDVGIKPTLQTYSALICGYAKAGKREEAEDTF 496
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 103/244 (42%), Gaps = 2/244 (0%)
Query: 136 ADWLAVLKQLKLME-HPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLL 194
A W ++LK ++E + +QV + + E E + Y +I Y + + + + +
Sbjct: 928 AIWNSMLKMYTVIEDYKKTVQVYQ-RIKESGLEPDETTYNTLIIMYCRDRRPEEGYSLMQ 986
Query: 195 AMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG 254
M+ G T ++ + K L+ AE+ FEE+ G LD+ Y +M+ +G
Sbjct: 987 QMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSG 1046
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
+ E LL+ M + L+ YS +GN + A++V ++ + +
Sbjct: 1047 SDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKNTEVELTTLPYS 1106
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
+I+AY + + M+K GLEP + + A + + + L L+
Sbjct: 1107 SVIDAYLRSKDYKSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKEKSEVMLLLKALQDI 1166
Query: 375 GFMV 378
GF +
Sbjct: 1167 GFDI 1170
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 81/180 (45%), Gaps = 1/180 (0%)
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG-SEVYKALL 282
A + F E++L G + SMV+ Y + G + ++ + + + + S +Y ++
Sbjct: 700 ASQVFSELRLSGCEPSESVCKSMVVVYCKLGFPETAYQVVNQAETKGFHFACSPMYTDII 759
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
Y + A+ V ++ +G TPD + L++AY G ++A F M + G
Sbjct: 760 EAYGKLKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAECGCYERARAIFNTMMRDGPS 819
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + + +L A + +L + +L+ GF + K + + F R G + EV +
Sbjct: 820 PTVESINKLLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVNKI 879
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 53/124 (42%)
Query: 189 AENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVM 248
AE L MK G T+ +++V YS +GN + AE+ +K L Y S++
Sbjct: 1051 AEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKNTEVELTTLPYSSVID 1110
Query: 249 AYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITP 308
AY+R+ G L EM + + ++ +R S + + +A+Q G
Sbjct: 1111 AYLRSKDYKSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKEKSEVMLLLKALQDIGFDI 1170
Query: 309 DARM 312
R+
Sbjct: 1171 PIRL 1174
>gi|449444598|ref|XP_004140061.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27270-like [Cucumis sativus]
Length = 1062
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 82/179 (45%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I+ Y +I YG+ ++ A A + G D+ T ++ Y KAG A F
Sbjct: 807 SIQTYNTMISVYGRGRKLDKAVEMFNAARSSGLSPDEKAYTNLISCYGKAGKTHEASLLF 866
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+ G SY MV Y AG+ + E LL+ M+ + S Y +L+R Y+ +
Sbjct: 867 KEMLEEGVKPGMVSYNIMVNVYANAGLHEETENLLKAMEQDAIVPDSFTYFSLIRAYTQS 926
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
A+++ ++Q GI LL++A AG +KA + ++ AGL P C
Sbjct: 927 CKYSEAEKIINSMQEKGIPTTCAHYDLLLSALAKAGMIRKAERVYDELQTAGLSPDVTC 985
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 100/200 (50%), Gaps = 3/200 (1%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M+ + + D+V +++ +Y K G + A +TFEE++ LG D++SY +M ++ +
Sbjct: 390 MESKKVVVDEVIYGLLIRIYGKLGLYEDAHKTFEEMEQLGLLTDEKSYLAMAQVHLNSRN 449
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
++ ++ M ++ +++ Y L+ Y M + A+ F+A+ G+ PDAR C
Sbjct: 450 FEKALDIIELMKSRNIWLSRFAYIVSLQCYVMKEDIRSAESTFQALSKTGL-PDARSCIY 508
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDL-ERD 374
++N Y KA ++RK G+ ++ L+L KE L+ E LI+L ++D
Sbjct: 509 ILNLYLKLDLVNKAKDFIAHIRKDGVVFDEELYKLVLRVYCKEG-LSEDAEILIELMKKD 567
Query: 375 GFMVGKEASCTLAAWFKRLG 394
V + T + FK G
Sbjct: 568 ELFVDNKFMETFSFMFKLDG 587
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 105/244 (43%)
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL 221
L+ S+ ++ YT ++ YG+ +I+ AE T L M G D+V M+ Y++ G+
Sbjct: 181 LQLSYRPSVIVYTIVLRAYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH 240
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
K + +K G + M+ + + G+ + + L +M V Y +
Sbjct: 241 KTMLSFYSAVKDRGIVPPIAVFNFMLSSLQKKGLHAKVKELWMQMVEIGVTFSDFTYTVV 300
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+ G+SE A +VF ++ G P+ LLI+ S + +++MR +
Sbjct: 301 INSLVKEGHSEEAFKVFNEMKNCGFIPEEVTYNLLISLSIKRENSDEVLRLYKDMRDKDI 360
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEH 401
PS+ + +L+ K ++AL ++E +V + L + +LG+ E+
Sbjct: 361 VPSNYTCSSLLTLFYKNGDYSKALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAHK 420
Query: 402 VLRE 405
E
Sbjct: 421 TFEE 424
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 86/199 (43%)
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G + T M+ +Y + L A E F + G D+++Y +++ Y +AG
Sbjct: 803 GIVPSIQTYNTMISVYGRGRKLDKAVEMFNAARSSGLSPDEKAYTNLISCYGKAGKTHEA 862
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+L +EM + V G Y ++ Y+ G E + + +A++ I PD+ LI A
Sbjct: 863 SLLFKEMLEEGVKPGMVSYNIMVNVYANAGLHEETENLLKAMEQDAIVPDSFTYFSLIRA 922
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
Y + + +A +M++ G+ + L+LSA K + +A +L+ G
Sbjct: 923 YTQSCKYSEAEKIINSMQEKGIPTTCAHYDLLLSALAKAGMIRKAERVYDELQTAGLSPD 982
Query: 380 KEASCTLAAWFKRLGVVEE 398
+ TL + G V E
Sbjct: 983 VTCNRTLMRGYLDYGYVRE 1001
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 119/284 (41%), Gaps = 41/284 (14%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
L++Q+ E+ + F YT +I+ K+ + A MK GFI ++VT ++
Sbjct: 281 LWMQMVEIGVTFSDFT-----YTVVINSLVKEGHSEEAFKVFNEMKNCGFIPEEVTYNLL 335
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ + K N +++++ + S++ + + G + L EM++++V
Sbjct: 336 ISLSIKRENSDEVLRLYKDMRDKDIVPSNYTCSSLLTLFYKNGDYSKALSLFSEMESKKV 395
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDAR----MCALLINA-------- 319
V +Y L+R Y G E A + FE ++ G+ D + M + +N+
Sbjct: 396 VVDEVIYGLLIRIYGKLGLYEDAHKTFEEMEQLGLLTDEKSYLAMAQVHLNSRNFEKALD 455
Query: 320 -----------------------YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACE 356
Y M + A + FQ + K GL + C+ IL+
Sbjct: 456 IIELMKSRNIWLSRFAYIVSLQCYVMKEDIRSAESTFQALSKTGLPDARSCI-YILNLYL 514
Query: 357 KENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
K + +N+A +F+ + +DG + +E + + + G+ E+ E
Sbjct: 515 KLDLVNKAKDFIAHIRKDGVVFDEELYKLVLRVYCKEGLSEDAE 558
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 81/182 (44%), Gaps = 4/182 (2%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+LEE + + Y +++ Y + EN L AM++ + D T ++ Y+++
Sbjct: 869 MLEEGVKPGMVSYNIMVNVYANAGLHEETENLLKAMEQDAIVPDSFTYFSLIRAYTQSCK 928
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
AE+ ++ G P Y ++ A +AGM+ + E + E+ + +
Sbjct: 929 YSEAEKIINSMQEKGIPTTCAHYDLLLSALAKAGMIRKAERVYDELQTAGLSPDVTCNRT 988
Query: 281 LLRGYSMNGNSEGAQRVFEAI-QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+RGY G + FE+ ++AG D + + ++ Y+ G+ +A +M+
Sbjct: 989 LMRGYLDYGYVREGIKFFESTCKYAG---DRFIMSAAVHFYKAEGKEDEALNILDSMKTL 1045
Query: 340 GL 341
GL
Sbjct: 1046 GL 1047
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 74/171 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+ +I Y K + + A + +G+ V ++ +V + G ++AE
Sbjct: 706 FGSMIDAYIKCDKAEEASTLYKELIEKGYDLGAVAVSRIVNTLTVGGKHRVAENVVRASL 765
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G LD ++ + + A + G L + M A + + Y ++ Y +
Sbjct: 766 NCGLELDTVAFNTFIKAMLEGGKLHFASRIYEHMIALGIVPSIQTYNTMISVYGRGRKLD 825
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
A +F A + +G++PD + LI+ Y AG++ +A F+ M + G++P
Sbjct: 826 KAVEMFNAARSSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEMLEEGVKP 876
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 46/229 (20%), Positives = 89/229 (38%), Gaps = 2/229 (0%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
+I YGK+ +I A L A+ + M+ Y K + A ++E+ G
Sbjct: 676 LISLYGKERKINQAAEVLAAVANS--CTSTLIFGSMIDAYIKCDKAEEASTLYKELIEKG 733
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
L + +V G E ++R + + + + ++ G A
Sbjct: 734 YDLGAVAVSRIVNTLTVGGKHRVAENVVRASLNCGLELDTVAFNTFIKAMLEGGKLHFAS 793
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
R++E + GI P + +I+ Y + KA F R +GL P +K ++S
Sbjct: 794 RIYEHMIALGIVPSIQTYNTMISVYGRGRKLDKAVEMFNAARSSGLSPDEKAYTNLISCY 853
Query: 356 EKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
K + + A ++ +G G + + + G+ EE E++L+
Sbjct: 854 GKAGKTHEASLLFKEMLEEGVKPGMVSYNIMVNVYANAGLHEETENLLK 902
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/202 (18%), Positives = 79/202 (39%), Gaps = 2/202 (0%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D + ++ +Y K + A E + +GSM+ AY++ + L
Sbjct: 669 DDAIIASLISLYGKERKINQAAEVLAAVA--NSCTSTLIFGSMIDAYIKCDKAEEASTLY 726
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
+E+ + +G+ ++ ++ G A+ V A G+ D I A
Sbjct: 727 KELIEKGYDLGAVAVSRIVNTLTVGGKHRVAENVVRASLNCGLELDTVAFNTFIKAMLEG 786
Query: 324 GQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEAS 383
G+ A +++M G+ PS + ++S + +L++A+E G ++A
Sbjct: 787 GKLHFASRIYEHMIALGIVPSIQTYNTMISVYGRGRKLDKAVEMFNAARSSGLSPDEKAY 846
Query: 384 CTLAAWFKRLGVVEEVEHVLRE 405
L + + + G E + +E
Sbjct: 847 TNLISCYGKAGKTHEASLLFKE 868
>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
Length = 619
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 97/210 (46%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
+A++ Y +I+ + K +++ A AMKR G + + VT + V + K G ++ A +
Sbjct: 255 KADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMK 314
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
F ++++ G L++ +Y ++ +AG LD VLL EM Q V + Y L+ G
Sbjct: 315 LFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLC 374
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
A+ V ++ AG+ + + LI+ + M S+KA M+ GLE
Sbjct: 375 KERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDIS 434
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGF 376
++ ++L+ A L ++ G
Sbjct: 435 LYGALIQGLCNVHKLDEAKSLLTKMDESGL 464
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 96/217 (44%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
A+ E AN+ ++ + + K+ ++ A M+ RG ++ T T ++ KAG
Sbjct: 283 AMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAG 342
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
L A +E+ G PL+ +Y +V + + E +LR M+ V +Y
Sbjct: 343 RLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYT 402
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ G+ MN NSE A + ++ G+ D + LI + +A + M ++
Sbjct: 403 TLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDES 462
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
GLEP+ ++ AC K ++ A+ L + GF
Sbjct: 463 GLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGF 499
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/215 (19%), Positives = 87/215 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E+ N+ + +I K+ ++ A + MK G + D VT ++ Y K G
Sbjct: 179 LFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGE 238
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L E+ EE++ G D +Y +++ + + G ++ M + V +
Sbjct: 239 LDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFST 298
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+ + G A ++F ++ G+ + LI+ AG+ A M + G
Sbjct: 299 FVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQG 358
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+ + +++ KE ++ A + L +E+ G
Sbjct: 359 VPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAG 393
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 89/230 (38%), Gaps = 22/230 (9%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ YT ++ G K+ ++ AE+ L M++ G +++ T ++ + N + A
Sbjct: 362 NVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLL 421
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY---------- 278
E+K G LD YG+++ LD + LL +MD + +Y
Sbjct: 422 SEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKS 481
Query: 279 -----------KALLRGYS-MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
K L G+ NG A ++F + G++ D + L++ Y G
Sbjct: 482 GKVPEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNL 541
Query: 327 QKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
A+ M +GL+ C +S N + A E ++ G
Sbjct: 542 HDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGI 591
>gi|302762967|ref|XP_002964905.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
gi|300167138|gb|EFJ33743.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
Length = 773
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 85/219 (38%), Gaps = 13/219 (5%)
Query: 137 DWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAM 196
DW +L M H E + ++ Y ++ + ++ A M
Sbjct: 168 DWEGLLNLFAQMRH-------------EGIQPDLITYNTLLSACSSRGLVEQAAMVFKTM 214
Query: 197 KRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGML 256
G + D VT +V ++ + L EE E++ G P D Y S++ AY AG +
Sbjct: 215 NESGVVADAVTYKSLVDTFAGSNQLGRVEELLREMEDEGNPPDIAGYNSLIEAYADAGNV 274
Query: 257 DRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALL 316
+ ++M E Y LLR Y G E + +F ++ P L
Sbjct: 275 HGAAGVFKQMQRGGCAPDVETYSTLLRIYGNQGCFEQVRSLFSDMKDLSTPPTVATYNSL 334
Query: 317 INAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
I + G Q++ F +M +G++P D + +LS C
Sbjct: 335 IQVFGEGGYFQESINLFHDMVDSGVKPDDATYSALLSVC 373
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 111/297 (37%), Gaps = 39/297 (13%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+E +I Y +I Y + A M+R G D T + ++ +Y G +
Sbjct: 251 DEGNPPDIAGYNSLIEAYADAGNVHGAAGVFKQMQRGGCAPDVETYSTLLRIYGNQGCFE 310
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
F ++K L P +Y S++ + G L +M V Y ALL
Sbjct: 311 QVRSLFSDMKDLSTPPTVATYNSLIQVFGEGGYFQESINLFHDMVDSGVKPDDATYSALL 370
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G + A ++ + + TP A LI++Y + A ++ +R+AGL+
Sbjct: 371 SVCGRGGLTREAAKIHQHMLTNESTPSLEASAGLISSYGKMAMYKDALVSYYRIREAGLD 430
Query: 343 PSDKC-----------------------------------VALILSACEKENQLNRALEF 367
P V ++ A K + ALEF
Sbjct: 431 PQVSAYDALIQGYAKGGLYVEAGSTLYAMNKAGFQAPVSSVNSVMEAYSKVGLHDEALEF 490
Query: 368 LIDL-ERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRETYSKIPGSRSIAL 423
+L +++G V + TL + +G++EE + E+ + + SK+PG+R L
Sbjct: 491 FSELQQKEGSEVDERTHETLLGVYCDMGLLEEAK---EEFVIIKETSKVPGARVYCL 544
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 103/269 (38%), Gaps = 59/269 (21%)
Query: 135 RADWLAVLKQLKLM---------EHPLYLQVAELA---LLE---ESFEA--------NIR 171
R+DW L+ K M EH + + + LLE E FE N+
Sbjct: 59 RSDWHRALRLFKYMQRQQWCKPTEHIYTIMIGIMGREGLLEKCSEIFEDMPENDVKWNVY 118
Query: 172 DYTKIIHGYGKKMQIQNA------------------ENTLL------------------A 195
+T +I+ YG+ Q + + NT+L
Sbjct: 119 AFTALINAYGRNGQYEASLHLLARMKKEQVEPNLITYNTVLNACSKGGLDWEGLLNLFAQ 178
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M+ G D +T ++ S G ++ A F+ + G D +Y S+V + +
Sbjct: 179 MRHEGIQPDLITYNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVTYKSLVDTFAGSNQ 238
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
L R E LLREM+ + Y +L+ Y+ GN GA VF+ +Q G PD +
Sbjct: 239 LGRVEELLREMEDEGNPPDIAGYNSLIEAYADAGNVHGAAGVFKQMQRGGCAPDVETYST 298
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
L+ Y G ++ + F +M+ P+
Sbjct: 299 LLRIYGNQGCFEQVRSLFSDMKDLSTPPT 327
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 7/124 (5%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E + + Y +I GY K A +TL AM + GF ++ ++ YSK G
Sbjct: 426 EAGLDPQVSAYDALIQGYAKGGLYVEAGSTLYAMNKAGFQAPVSSVNSVMEAYSKVGLHD 485
Query: 223 MAEETFEEIKLL-GEPLDKRSYGSMVMAYVRAGMLDRGE---VLLREMDAQEVYVGSEVY 278
A E F E++ G +D+R++ +++ Y G+L+ + V+++E G+ VY
Sbjct: 486 EALEFFSELQQKEGSEVDERTHETLLGVYCDMGLLEEAKEEFVIIKETSKVP---GARVY 542
Query: 279 KALL 282
LL
Sbjct: 543 CLLL 546
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 63/164 (38%), Gaps = 1/164 (0%)
Query: 243 YGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQ 302
Y M+ R G+L++ + +M +V + AL+ Y NG E + + ++
Sbjct: 85 YTIMIGIMGREGLLEKCSEIFEDMPENDVKWNVYAFTALINAYGRNGQYEASLHLLARMK 144
Query: 303 FAGITPDARMCALLINAYQMAGQSQKA-YTAFQNMRKAGLEPSDKCVALILSACEKENQL 361
+ P+ ++NA G + F MR G++P +LSAC +
Sbjct: 145 KEQVEPNLITYNTVLNACSKGGLDWEGLLNLFAQMRHEGIQPDLITYNTLLSACSSRGLV 204
Query: 362 NRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+A + G + +L F + VE +LRE
Sbjct: 205 EQAAMVFKTMNESGVVADAVTYKSLVDTFAGSNQLGRVEELLRE 248
>gi|302768589|ref|XP_002967714.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
gi|300164452|gb|EFJ31061.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
Length = 384
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 97/226 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +++G +++ AE L MKR + VT T ++ Y+ G L+ + F+E+K
Sbjct: 56 YNCLVNGLVNSGRLEAAEKILDDMKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMK 115
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
GE + +Y +++ Y R G+ L EMD Y + Y G E
Sbjct: 116 DKGESPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLE 175
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
+R+ + + G+ PD L++ Y KA+ + M +AG P+ ++L
Sbjct: 176 DMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIML 235
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
S+ KE + A + +L+ G + + + + R G+ E
Sbjct: 236 SSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTE 281
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 93/209 (44%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y I YGK+ +++ E L M +G DQVT ++ +Y+K A E
Sbjct: 157 DVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEIL 216
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E+ G + +Y M+ + + + L + ++ V Y A+L Y +
Sbjct: 217 REMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRH 276
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G A ++++ + AG P + LI +Y G Q+A FQ+MRK+G+ P K
Sbjct: 277 GLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIY 336
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFM 377
++ A K + A ++ ++GF+
Sbjct: 337 TALMDAYGKAGRCREAELLYFEMTKEGFV 365
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 78/182 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ Y KK A L M G+ + T +M+ K ++ A + FE +K
Sbjct: 196 YNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLK 255
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +Y +M+ Y R G+ L EM Y L+ Y +G +
Sbjct: 256 SKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQ 315
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A F+ ++ +GI PD ++ L++AY AG+ ++A + M K G P +++
Sbjct: 316 EALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFEMTKEGFVPDGITYGILV 375
Query: 353 SA 354
A
Sbjct: 376 RA 377
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 6/111 (5%)
Query: 150 HPLYLQVAELALLEESFEAN----IRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQ 205
H LY + A+L +E EA I Y+ +I YG Q A M++ G + D
Sbjct: 276 HGLYTEAAKL--WDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDT 333
Query: 206 VTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGML 256
T ++ Y KAG + AE + E+ G D +YG +V A+ AG L
Sbjct: 334 KIYTALMDAYGKAGRCREAELLYFEMTKEGFVPDGITYGILVRAFANAGRL 384
>gi|224133034|ref|XP_002327945.1| predicted protein [Populus trichocarpa]
gi|222837354|gb|EEE75733.1| predicted protein [Populus trichocarpa]
Length = 1450
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 101/239 (42%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E ++ Y +I YG+ AE ++ RGF D V+ + +++ GN++ ++
Sbjct: 360 EPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSFLYAFAREGNVEKVKD 419
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
EE+ +G D+ +Y +M+ Y + G D L R+M + Y L+
Sbjct: 420 ICEEMVKIGFGKDEMTYNTMIHMYGKQGQNDLALQLYRDMKSSGRNPDVITYTVLIDSLG 479
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
E A + + G+ P R + LI Y AG+ +A F M ++G P
Sbjct: 480 KTNKIEEAAGMMSEMLNTGVKPTLRTYSALICGYAKAGKPVEAEETFDCMLRSGTRPDQL 539
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+++L + N+ RA+ F ++ DG M + VE++ V+R+
Sbjct: 540 AYSVMLDIHLRFNEPKRAMTFYKEMIHDGIMPEHSLYELMLRTLGNANKVEDIGRVVRD 598
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 121/280 (43%), Gaps = 25/280 (8%)
Query: 114 SPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFE--ANIR 171
SP +++ LL A + + R + V+++L+ + + + + L+ ++F NI
Sbjct: 847 SPTVDSINGLLQALI--VDGRLEELYVVVQELQ--DIGFKISKSSILLMLDAFARAGNIF 902
Query: 172 DYTKIIHG-----YGKKM--------------QIQNAENTLLAMKRRGFICDQVTLTVMV 212
+ KI HG Y M Q+++ E L M+ GF D ++
Sbjct: 903 EVKKIYHGMKAAGYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVL 962
Query: 213 VMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY 272
MY + + + ++ IK G D+ +Y +++ Y R G VL+ EM +
Sbjct: 963 KMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYNILIVMYCRDHRPKEGLVLMDEMRTVGLE 1022
Query: 273 VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTA 332
+ YK+L+ + E A+ +FE +Q G D +++ Y+ +G KA
Sbjct: 1023 PKLDTYKSLVASFGKQQLVEQAEELFEELQSTGCKLDRSFYHIMMKIYRNSGSHSKAQRL 1082
Query: 333 FQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLE 372
F M+ G+EP+ + L++ + Q A + L +L+
Sbjct: 1083 FSMMKDEGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLK 1122
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 90/200 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ + ++ ++ ++ M + GF D++T M+ MY K G +A + + ++K
Sbjct: 401 YNSFLYAFAREGNVEKVKDICEEMVKIGFGKDEMTYNTMIHMYGKQGQNDLALQLYRDMK 460
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y ++ + + ++ ++ EM V Y AL+ GY+ G
Sbjct: 461 SSGRNPDVITYTVLIDSLGKTNKIEEAAGMMSEMLNTGVKPTLRTYSALICGYAKAGKPV 520
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ F+ + +G PD +++++ + + ++A T ++ M G+ P L+L
Sbjct: 521 EAEETFDCMLRSGTRPDQLAYSVMLDIHLRFNEPKRAMTFYKEMIHDGIMPEHSLYELML 580
Query: 353 SACEKENQLNRALEFLIDLE 372
N++ + D+E
Sbjct: 581 RTLGNANKVEDIGRVVRDME 600
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 101/221 (45%), Gaps = 1/221 (0%)
Query: 157 AELALLEES-FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
A L+ +EE+ F+ ++ + ++ Y + +K G D+ T +++VMY
Sbjct: 941 AMLSEMEEAGFKPDLSIWNSVLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYNILIVMY 1000
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
+ K +E++ +G +Y S+V ++ + ++++ E L E+ + +
Sbjct: 1001 CRDHRPKEGLVLMDEMRTVGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSTGCKLDR 1060
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
Y +++ Y +G+ AQR+F ++ G+ P LL+ +Y +GQ Q+A N
Sbjct: 1061 SFYHIMMKIYRNSGSHSKAQRLFSMMKDEGVEPTIATMHLLMVSYGSSGQPQEAEKVLSN 1120
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+++ S + ++ A + N ++ L ++ +G
Sbjct: 1121 LKETDANLSTLPYSSVIDAYVRNGDYNAGIQKLKQVKEEGL 1161
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 101/239 (42%), Gaps = 6/239 (2%)
Query: 139 LAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKR 198
LAVL K + PL ++V A E S E ++ Y ++ Y + + + M+
Sbjct: 229 LAVLG--KANQEPLAVEVFTRA--EPSVENTVKVYNAMMGVYARSGKFNKVQELFDLMRE 284
Query: 199 RGFICDQVTLTVMVVMYSKAGNL--KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGML 256
RG D V+ ++ KAG + +A E E++ G D +Y +++ A RA L
Sbjct: 285 RGCEPDLVSFNTLINARLKAGEMTPNLAIELLTEVRRSGLRPDIITYNTLISACSRASNL 344
Query: 257 DRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALL 316
+ + +M A Y A++ Y G S A+++F ++ G PDA
Sbjct: 345 EEAVNVFDDMVAHHCEPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSF 404
Query: 317 INAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+ A+ G +K + M K G + ++ K+ Q + AL+ D++ G
Sbjct: 405 LYAFAREGNVEKVKDICEEMVKIGFGKDEMTYNTMIHMYGKQGQNDLALQLYRDMKSSG 463
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/188 (18%), Positives = 81/188 (43%), Gaps = 4/188 (2%)
Query: 159 LALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
L L++E E + Y ++ +GK+ ++ AE ++ G D+ +M+ +
Sbjct: 1010 LVLMDEMRTVGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSTGCKLDRSFYHIMMKI 1069
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
Y +G+ A+ F +K G + ++++Y +G E +L + + +
Sbjct: 1070 YRNSGSHSKAQRLFSMMKDEGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETDANLS 1129
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+ Y +++ Y NG+ + + ++ G+ PD R+ I A ++ + +A
Sbjct: 1130 TLPYSSVIDAYVRNGDYNAGIQKLKQVKEEGLEPDHRIWTCFIRAASLSQHTSEAILLLN 1189
Query: 335 NMRKAGLE 342
+R G +
Sbjct: 1190 ALRDTGFD 1197
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 118/304 (38%), Gaps = 17/304 (5%)
Query: 83 NITEEQK-----QAISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRF-MKPRRA 136
NI E +K +A FP R A Q++C + ++ +L+ KP +
Sbjct: 900 NIFEVKKIYHGMKAAGYFPSMHLYRVMA---QLLCRGKQVRDVEAMLSEMEEAGFKPDLS 956
Query: 137 DWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAM 196
W +VLK ++ + E+ E + Y +I Y + + + + M
Sbjct: 957 IWNSVLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYNILIVMYCRDHRPKEGLVLMDEM 1016
Query: 197 KRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGML 256
+ G T +V + K ++ AEE FEE++ G LD+ Y M+ Y +G
Sbjct: 1017 RTVGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSTGCKLDRSFYHIMMKIYRNSGSH 1076
Query: 257 DRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL- 315
+ + L M + V L+ Y +G + A++V ++ DA + L
Sbjct: 1077 SKAQRLFSMMKDEGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLK----ETDANLSTLP 1132
Query: 316 ---LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLE 372
+I+AY G + +++ GLEP + + A + A+ L L
Sbjct: 1133 YSSVIDAYVRNGDYNAGIQKLKQVKEEGLEPDHRIWTCFIRAASLSQHTSEAILLLNALR 1192
Query: 373 RDGF 376
GF
Sbjct: 1193 DTGF 1196
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 82/182 (45%), Gaps = 12/182 (6%)
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
GF + ++ +M+ +++AGN+ ++ + +K G + SM + V A +L RG
Sbjct: 880 GFKISKSSILLMLDAFARAGNIFEVKKIYHGMKAAG------YFPSMHLYRVMAQLLCRG 933
Query: 260 ------EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
E +L EM+ ++ ++L+ Y + ++++ I+ G+ PD
Sbjct: 934 KQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTY 993
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
+LI Y + ++ MR GLEP ++++ K+ + +A E +L+
Sbjct: 994 NILIVMYCRDHRPKEGLVLMDEMRTVGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQS 1053
Query: 374 DG 375
G
Sbjct: 1054 TG 1055
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 46/272 (16%), Positives = 102/272 (37%), Gaps = 35/272 (12%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
NI Y +I YG+ Q AE+ M++ ++ ++ Y+ +G + A F
Sbjct: 779 NISVYVDVIEAYGRLKLWQKAESVAGNMRQSCITVNRKVWNALIEAYAASGCYERARAVF 838
Query: 229 -----------------------------------EEIKLLGEPLDKRSYGSMVMAYVRA 253
+E++ +G + K S M+ A+ RA
Sbjct: 839 NTMMKDGPSPTVDSINGLLQALIVDGRLEELYVVVQELQDIGFKISKSSILLMLDAFARA 898
Query: 254 GMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
G + + + M A + +Y+ + + + + ++ AG PD +
Sbjct: 899 GNIFEVKKIYHGMKAAGYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEMEEAGFKPDLSIW 958
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
++ Y +K +Q +++ GLEP + +++ ++++ L + ++
Sbjct: 959 NSVLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYNILIVMYCRDHRPKEGLVLMDEMRT 1018
Query: 374 DGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
G + +L A F + +VE+ E + E
Sbjct: 1019 VGLEPKLDTYKSLVASFGKQQLVEQAEELFEE 1050
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 70/170 (41%), Gaps = 2/170 (1%)
Query: 209 TVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEV--LLREM 266
M+ +Y+++G +E F+ ++ G D S+ +++ A ++AG + LL E+
Sbjct: 260 NAMMGVYARSGKFNKVQELFDLMRERGCEPDLVSFNTLINARLKAGEMTPNLAIELLTEV 319
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
+ Y L+ S N E A VF+ + PD +I+ Y G S
Sbjct: 320 RRSGLRPDIITYNTLISACSRASNLEEAVNVFDDMVAHHCEPDLWTYNAMISVYGRCGLS 379
Query: 327 QKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
KA F ++ G P L A +E + + + ++ + GF
Sbjct: 380 GKAEQLFNDLESRGFFPDAVSYNSFLYAFAREGNVEKVKDICEEMVKIGF 429
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 85/205 (41%), Gaps = 13/205 (6%)
Query: 208 LTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRS---YGSMVMAYVRAGMLDRGEVL-- 262
L+ ++ + KA +A E F EP + + Y +M+ Y R+G ++ + L
Sbjct: 225 LSTILAVLGKANQEPLAVEVFTR----AEPSVENTVKVYNAMMGVYARSGKFNKVQELFD 280
Query: 263 -LREMDAQEVYVG-SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAY 320
+RE + V + + A L+ M N A + ++ +G+ PD LI+A
Sbjct: 281 LMRERGCEPDLVSFNTLINARLKAGEMTPNL--AIELLTEVRRSGLRPDIITYNTLISAC 338
Query: 321 QMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGK 380
A ++A F +M EP ++S + +A + DLE GF
Sbjct: 339 SRASNLEEAVNVFDDMVAHHCEPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDA 398
Query: 381 EASCTLAAWFKRLGVVEEVEHVLRE 405
+ + F R G VE+V+ + E
Sbjct: 399 VSYNSFLYAFAREGNVEKVKDICEE 423
Score = 38.1 bits (87), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 53/117 (45%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
MK G T+ +++V Y +G + AE+ +K L Y S++ AYVR G
Sbjct: 1086 MKDEGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETDANLSTLPYSSVIDAYVRNGD 1145
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARM 312
+ G L+++ + + ++ +R S++ ++ A + A++ G R+
Sbjct: 1146 YNAGIQKLKQVKEEGLEPDHRIWTCFIRAASLSQHTSEAILLLNALRDTGFDLPIRL 1202
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 115/263 (43%), Gaps = 18/263 (6%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRD 172
++P+ S L+ +V+ K R A+ L H +++ +
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEEL----------HK--------EMIQRGISPDTVT 354
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I G+ K+ Q+ A + L M +G + T +++ Y KA + E F ++
Sbjct: 355 YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS 414
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
L G D +Y +++ + G L+ + L +EM ++ V YK LL G NG E
Sbjct: 415 LRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPE 474
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +FE I+ + + D + ++I+ A + A+ F ++ G++P K +++
Sbjct: 475 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMI 534
Query: 353 SACEKENQLNRALEFLIDLERDG 375
K+ L+ A +E DG
Sbjct: 535 GGLCKKGSLSEADLLFRKMEEDG 557
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 103/245 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E F+ N Y ++ K Q A L M+ R D V ++++ K G+
Sbjct: 203 MVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGS 262
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A F E+++ G D Y +++ + AG D G LLR+M +++ + A
Sbjct: 263 LDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSA 322
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ + G A+ + + + GI+PD LI+ + Q KA M G
Sbjct: 323 LIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
P+ + ++++ K N ++ LE + G + TL F LG +E +
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAK 442
Query: 401 HVLRE 405
+ +E
Sbjct: 443 ELFQE 447
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/317 (19%), Positives = 132/317 (41%), Gaps = 28/317 (8%)
Query: 62 DMGKTQVKDDTSMFTWIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETGNLS 121
DM K ++ D F+ + I + E + + + ++M +R +SP+T +
Sbjct: 307 DMIKRKITPDVVAFSAL-IDCFVKEGKLREAEELHKEMIQRG---------ISPDTVTYT 356
Query: 122 DLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYG 181
L+ + + QL H L L V++ NIR + +I+GY
Sbjct: 357 SLIDGFCKE------------NQLDKANHMLDLMVSK------GCGPNIRTFNILINGYC 398
Query: 182 KKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKR 241
K I + M RG + D VT ++ + + G L++A+E F+E+ D
Sbjct: 399 KANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIV 458
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI 301
SY ++ G ++ + +++ ++ + +Y ++ G + A +F ++
Sbjct: 459 SYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL 518
Query: 302 QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQL 361
G+ PD + ++I G +A F+ M + G P+ +++ A E
Sbjct: 519 PLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDA 578
Query: 362 NRALEFLIDLERDGFMV 378
++ + + +++R GF V
Sbjct: 579 TKSAKLIEEIKRCGFSV 595
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 86/210 (40%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ F+A+I YT +I G+ + + L M +R D V + ++ + K G L+
Sbjct: 276 KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
AEE +E+ G D +Y S++ + + LD+ +L M ++ + L+
Sbjct: 336 AEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
GY + +F + G+ D LI + G+ + A FQ M + P
Sbjct: 396 GYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRP 455
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLER 373
++L + +ALE +E+
Sbjct: 456 DIVSYKILLDGLCDNGEPEKALEIFEKIEK 485
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 88/196 (44%), Gaps = 1/196 (0%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
+++G ++ +A + M GF ++VT ++ + K+G +A E +++
Sbjct: 183 LVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERK 242
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
LD Y ++ + G LD L EM+ + +Y L+RG+ G +
Sbjct: 243 IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGA 302
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
++ + ITPD + LI+ + G+ ++A + M + G+ P ++
Sbjct: 303 KLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGF 362
Query: 356 EKENQLNRALEFLIDL 371
KENQL++A ++DL
Sbjct: 363 CKENQLDKA-NHMLDL 377
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/243 (17%), Positives = 102/243 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ +E + ++ +I+G + ++ A + M G +TL +V G
Sbjct: 133 IIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGK 192
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + + G ++ +YG ++ ++G LLR+M+ +++ + + Y
Sbjct: 193 VSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSI 252
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G +G+ + A +F ++ G D + LI + AG+ ++M K
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+ P + ++ KE +L A E ++ + G +L F + +++
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372
Query: 401 HVL 403
H+L
Sbjct: 373 HML 375
>gi|449480434|ref|XP_004155892.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18950-like [Cucumis sativus]
Length = 638
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 97/223 (43%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
AL + + ++ YT +IHG+ K Q+++A M +GF+ ++ + ++ + K G
Sbjct: 358 ALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIG 417
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
NL A + ++++ G S ++++ G D REM + + Y
Sbjct: 418 NLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIVCDVITYN 477
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L++G+ G + + + +Q G+ P A LI G Q+A + +M
Sbjct: 478 TLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWNDMHNR 537
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEA 382
GL+P I+S ++ + +E+LI + + KE
Sbjct: 538 GLQPMVCTRDHIISGLCEQGYVVEGMEWLITMLKSNLKPQKET 580
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 88/207 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I Y +II+G+ K A A+K RG+ D V T ++ + K G L+ A + +
Sbjct: 332 DIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLW 391
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E+ G ++ SY +++ + + G LD L ++M + L+ G ++
Sbjct: 392 FEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLH 451
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G ++ A F + I D LI + G+ ++ + ++ GL+PS
Sbjct: 452 GRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSY 511
Query: 349 ALILSACEKENQLNRALEFLIDLERDG 375
A ++ + + A E D+ G
Sbjct: 512 AHLIQKLCQLGSVQEAKEMWNDMHNRG 538
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 31/177 (17%), Positives = 70/177 (39%), Gaps = 3/177 (1%)
Query: 238 LDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRV 297
+D + G ++ A+ + R +LR+ + ++ + L+ G+ N +
Sbjct: 261 VDIETVGYLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLEL 320
Query: 298 FEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEK 357
+ PD +IN + + +A+ F ++ G P ++ K
Sbjct: 321 VHTMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCK 380
Query: 358 ENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR---EYGLRET 411
QL A + ++ GF+ + + TL F ++G ++E + + + G +ET
Sbjct: 381 MGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKET 437
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 101/226 (44%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ + +IHG+ K+ ++ A N M ++G + D T +V KA + AE
Sbjct: 231 DVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVL 290
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ G D +Y +++ Y +G + R+M ++ + + + + + +
Sbjct: 291 RQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKH 350
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G S+ A+ +F+ + G PD ++L++ Y G+ F +M G+ + C+
Sbjct: 351 GRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCI 410
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
+++SA K ++ A+ +++ G TL + F R+G
Sbjct: 411 NILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMG 456
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 111/280 (39%), Gaps = 19/280 (6%)
Query: 98 KMTKRCKAFVKQI-ICVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQV 156
+++K C F + + V P+ G + ++ A + +A++ VL+Q+
Sbjct: 247 EVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEF--VLRQM----------- 293
Query: 157 AELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS 216
+++ E + Y IIHGY + + M +G I D VT + +
Sbjct: 294 -----VDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLC 348
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
K G K AEE F+ + G D SY ++ Y G L M + +
Sbjct: 349 KHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCH 408
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
L+ ++ G + A VF +Q G+ P+ + LI+A+ G+ A F M
Sbjct: 409 CINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQM 468
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
G+EP+ ++ L +A EF+ ++ G
Sbjct: 469 ISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGL 508
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 87/211 (41%), Gaps = 36/211 (17%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I Y+ ++HGY + + + N +M +G + + + +++ ++K G + A F
Sbjct: 371 DIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVF 430
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++ G + +Y +++ A+ R G L +M + + + VY +L+ G+ M+
Sbjct: 431 TEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMH 490
Query: 289 GN------------SEG------------------------AQRVFEAIQFAGITPDARM 312
G+ S+G AQ VF + G P
Sbjct: 491 GDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVT 550
Query: 313 CALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
LI+ Y + G+ +KA+ M G+EP
Sbjct: 551 FNSLIDGYCLVGKMEKAFGVLDAMVSVGIEP 581
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 99/237 (41%), Gaps = 4/237 (1%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
A++ E ++ ++ GY K +I + M + VT +++ +AG
Sbjct: 573 AMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAG 632
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
A++ F E+ G +D +Y ++ R + D L ++ A + +
Sbjct: 633 RTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILN 692
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
++ E A +F AI +G+ P+ ++I G ++A T F +M K+
Sbjct: 693 TMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKS 752
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCT--LAAWFKRLG 394
G PS + + I+ ++ + +A ++ + DG ++ EAS T L + F G
Sbjct: 753 GCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKV--DGTIISLEASTTSLLMSLFSSKG 807
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 93/239 (38%), Gaps = 41/239 (17%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
L+ +A+ ++ NI +I + K+ + A M+ +G + VT + +
Sbjct: 394 LFHSMADKGIVSNCHCINI-----LISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTL 448
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM----- 266
+ + + G L A E F ++ +G + Y S++ + G L + + + EM
Sbjct: 449 ISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGL 508
Query: 267 ----------------------DAQEVY-----VGSE----VYKALLRGYSMNGNSEGAQ 295
DAQ+V+ +G + +L+ GY + G E A
Sbjct: 509 HRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAF 568
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSA 354
V +A+ GI PD L++ Y +G+ F+ M ++P+ ++L
Sbjct: 569 GVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDG 627
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 91/208 (43%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ YT +I G+ KK Q++ A L M +GF + V ++ K G + A + F
Sbjct: 416 NLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMF 475
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E+ G D ++ S++ R ++ L R+M + V S + L+ +
Sbjct: 476 GEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRR 535
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A ++ + F G D LI A G +K F+ M + GL PS
Sbjct: 536 GEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITC 595
Query: 349 ALILSACEKENQLNRALEFLIDLERDGF 376
++++ +++ ALEF+ D+ GF
Sbjct: 596 NILINGFCTAGKVHNALEFMRDMIHRGF 623
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 97/243 (39%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + F N Y +I K +I A + M +G D T ++ +
Sbjct: 443 MLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDE 502
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ A + ++ L G + ++ +++ A++R G + L+ +M + + Y
Sbjct: 503 MEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNG 562
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L++ G E +FE + G+TP C +LIN + AG+ A ++M G
Sbjct: 563 LIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRG 622
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
P +++ K ++ AL L+ +G TL W R G ++
Sbjct: 623 FSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDAC 682
Query: 401 HVL 403
+L
Sbjct: 683 FLL 685
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 88/209 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I + +I G + ++++A M G I + VT ++ + + G ++ A +
Sbjct: 486 DIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLV 545
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ G PLD+ +Y ++ A + G +++G L EM + + L+ G+
Sbjct: 546 NDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTA 605
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G A + G +PD LIN G+ Q+A F+ ++ G++P
Sbjct: 606 GKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITY 665
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFM 377
++ +E + A L +GF+
Sbjct: 666 NTLICWLCREGAFDDACFLLYRGVENGFV 694
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 103/248 (41%), Gaps = 8/248 (3%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLL-AMKRRGFICDQVTLTVMVVMYSKA 218
ALL + N+ + +++G+ + ++ A + M G++ D T + +V K
Sbjct: 336 ALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKK 395
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
G A E ++ G + +Y ++ + + G L+ ++LREM + + + Y
Sbjct: 396 GLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGY 455
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
AL+ +G A +F + G PD LI + + A +++M
Sbjct: 456 NALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVL 515
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGK-------EASCTLAAWFK 391
G+ + ++ A + ++ AL+ + D+ G + + +A C A K
Sbjct: 516 EGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEK 575
Query: 392 RLGVVEEV 399
LG+ EE+
Sbjct: 576 GLGLFEEM 583
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 89/223 (39%), Gaps = 7/223 (3%)
Query: 185 QIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYG 244
++ NA L M + G + + + ++ SK + A + EE+ L+G P D ++
Sbjct: 225 EVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFN 284
Query: 245 SMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFA 304
+++ + R + G L+ M + Y L+ G + AQ + +
Sbjct: 285 TVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVP-- 342
Query: 305 GITPDARMCALLINAYQMAGQSQKAYTAF--QNMRKAGLEPSDKCVALILSACEKENQLN 362
P+ L+N + G+ +A TAF M G P + +++ K+
Sbjct: 343 --GPNVVHFNTLVNGFVRNGRLNEA-TAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFG 399
Query: 363 RALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
ALE + D++ G L F + G +EE +LRE
Sbjct: 400 SALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILRE 442
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
+I+G+ ++ NA + M RGF D VT ++ K G ++ A FE+++ G
Sbjct: 598 LINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEG 657
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV-YKALLRGYSMNGNSEG 293
D +Y +++ R G D LL + +V ++V + L+ + NSEG
Sbjct: 658 IQPDSITYNTLICWLCREGAFDDACFLLYR-GVENGFVPNDVTWNILVYNFGKQSNSEG 715
>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
Length = 859
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 104/237 (43%), Gaps = 5/237 (2%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++E E N+ Y +++GY + + E L M RG + VT T+++ Y K G
Sbjct: 252 MVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGK 311
Query: 221 LKMAEETFEEIK---LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
+ AE+ E++ LL +D+R YG +V Y + G ++ + EM + V +
Sbjct: 312 MDEAEKLLREVEEDELL--VVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVI 369
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
L++GY G A+RVF + + PD L++ Y G+ KA+ + M
Sbjct: 370 CNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEML 429
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
G+ P+ ++ + AL + G + + CT+ F ++G
Sbjct: 430 GDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMG 486
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 84/202 (41%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+E + R Y ++ GY + ++++A M R G + V ++ Y K G +
Sbjct: 325 DELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVC 384
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
AE F + D SY +++ Y R G + + +L EM + Y ++
Sbjct: 385 EAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVI 444
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
+G G+ + A ++ + G+TP+ C +++ + G S +A ++ + G
Sbjct: 445 KGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFT 504
Query: 343 PSDKCVALILSACEKENQLNRA 364
S ++S K +L A
Sbjct: 505 KSTVAFNTMISGLCKMGKLMEA 526
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 43/102 (42%)
Query: 243 YGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQ 302
+ ++ A+ GM + EM G LL G A VF+ I
Sbjct: 159 FDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQIV 218
Query: 303 FAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
GI PD MC++++NA+ G+ A + M K GLEP+
Sbjct: 219 GTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPN 260
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 55/125 (44%)
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
K+G L A + G D +Y +++ A +G +D L EM + +
Sbjct: 729 KSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNIT 788
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
+Y AL+ G GN + AQR+F + G+ P+A +LI Y G KA + M
Sbjct: 789 IYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKM 848
Query: 337 RKAGL 341
+ G+
Sbjct: 849 TEEGI 853
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 81/189 (42%), Gaps = 3/189 (1%)
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
+ G ++A F++I G D +V A+ + G +D +L +M + +
Sbjct: 203 QKGEGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVV 262
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
Y L+ GY G+ EG +RV + G++ + C +L+ Y G+ +A + +
Sbjct: 263 TYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREV 322
Query: 337 RKAGLEPSDKCV--ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
+ L D+ V L+ C+ ++ A+ ++ R G V TL + +LG
Sbjct: 323 EEDELLVVDERVYGVLVDGYCQM-GRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLG 381
Query: 395 VVEEVEHVL 403
V E E V
Sbjct: 382 QVCEAERVF 390
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%)
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
S V+ L++ ++ G ++ A VF+ + G P R C+ L+ G+ + A F
Sbjct: 156 SGVFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFD 215
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
+ G+ P +++++A + +++ A+E L + ++G L + G
Sbjct: 216 QIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRG 275
Query: 395 VVEEVEHVLR 404
E VE VLR
Sbjct: 276 DFEGVERVLR 285
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/216 (18%), Positives = 81/216 (37%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + + Y +I G +A + M RG ++++ M+ + K G+
Sbjct: 428 MLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGD 487
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A ++EI G ++ +M+ + G L + M + Y+
Sbjct: 488 SDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRT 547
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L GY NGN + A ++ ++ ++ M LI+ + M+ G
Sbjct: 548 LSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRG 607
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
L P+ ++S E +L++A ++ GF
Sbjct: 608 LSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGF 643
Score = 38.5 bits (88), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 38/218 (17%), Positives = 89/218 (40%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
+ +++ + + + Y ++ GY ++ ++ A M G VT ++
Sbjct: 391 VGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDV 450
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
G+ A + + G ++ S +M+ + + G DR +L +E+ + + +
Sbjct: 451 GSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAF 510
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
++ G G A VF+ ++ G++PD L + Y G Q+A+ M +
Sbjct: 511 NTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMER 570
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+ S + ++ K +LN + L++++ G
Sbjct: 571 QAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGL 608
Score = 38.1 bits (87), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 98/246 (39%), Gaps = 19/246 (7%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET- 227
N+ Y +I G+ + ++ A + M RGF + V + +V S + +++E T
Sbjct: 611 NVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIV--SSLYRDDRISEATV 668
Query: 228 -------FEEIKLLGEPLDKRSYGSMVM-AYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
F+ + + + DK + + A A LD+ ++ + VY
Sbjct: 669 ILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDIC-------NSLSNNIVYN 721
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
+ G +G + A+ V + G PD LI+A ++G +A+ M +
Sbjct: 722 IAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEK 781
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEV 399
GL P+ +++ K ++RA L + G + L + R+G +++
Sbjct: 782 GLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKA 841
Query: 400 EHVLRE 405
LRE
Sbjct: 842 SR-LRE 846
>gi|255661194|gb|ACU25766.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 426
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 101/218 (46%), Gaps = 4/218 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 213 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWVKVGKLDR 272
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ Y +M++AY RAG++ + LL E+ + L
Sbjct: 273 AAMLFQKLRNSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHIL-- 330
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
+ G E A VF AG D + LI+ + + F MR+ P
Sbjct: 331 --AAAGRLEEATWVFRQAIDAGEVKDITVFERLIHLFSKYKKYSNVVEVFDKMRERRYFP 388
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKE 381
+AL+L+A K ++ +A ++++ +G + E
Sbjct: 389 DSNVIALVLNAYGKLHEFEKANSVYMEMQDEGCIFSDE 426
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 101/233 (43%), Gaps = 4/233 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT ++ + + + A + M+ + D T +M+ +Y + G K A++ F ++
Sbjct: 117 YTTLLTMHVENKRFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMR 176
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+G + SY +++ Y A + L R M + + Y +++ Y E
Sbjct: 177 KIGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 236
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + +Q GI P++ + +I+ + G+ +A FQ +R +G+E ++
Sbjct: 237 KANNLIQEMQNRGIEPNSITYSTIISIWVKVGKLDRAAMLFQKLRNSGVEIDQVLYQTMI 296
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
A E+ + A L +L+R + A LAA G +EE V R+
Sbjct: 297 VAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAA----AGRLEEATWVFRQ 345
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ A + L M++ D V + ++ + K + A F +K
Sbjct: 12 YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 71
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y SM+ + +A + L+ EM V + Y LL + N
Sbjct: 72 RSGFAPDLVAYNSMINVFXKAKLFREARSLINEMRTAGVMPDTVSYTTLLTMHVENKRFL 131
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF ++ D C ++I+ Y G +++A F MRK G+EP+
Sbjct: 132 EALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGIEPN 183
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 31/172 (18%), Positives = 73/172 (42%), Gaps = 2/172 (1%)
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
D+ +Y +++ + + G+ D L++M+ V +Y L+ + A +F
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
++ +G PD +IN + A ++A + MR AG+ P +L+ +
Sbjct: 68 SRLKRSGFAPDLVAYNSMINVFXKAKLFREARSLINEMRTAGVMPDTVSYTTLLTMHVEN 127
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRE 410
+ AL ++ ++ + + +LG+ +E + + +G+R+
Sbjct: 128 KRFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF--WGMRK 177
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 100/213 (46%), Gaps = 2/213 (0%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+L S ++R Y+ +IHG + ++Q A L +G + D T ++ + K G
Sbjct: 611 CMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQG 670
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ A + E + G + +Y +++ +AG ++R L + + + + Y
Sbjct: 671 GIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYA 730
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
++ GY +GN A R+F+ + G+ PD+ + + LI+ + G ++KA + F +
Sbjct: 731 TIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQK 790
Query: 340 GLEPSDKCVALILSACE--KENQLNRALEFLID 370
G + AL+ C+ K + N+ LE ++D
Sbjct: 791 GFASTSSLNALMDGFCKSGKVIEANQLLEDMVD 823
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 101/220 (45%), Gaps = 4/220 (1%)
Query: 161 LLEESFEANIRD----YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS 216
+LEE F ++ YT +I G+ ++ A M RG + T +V
Sbjct: 328 MLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVC 387
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
K G+++ A+ E+ ++G D ++Y +M+ Y++ R + LL EM + +
Sbjct: 388 KFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAY 447
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
++ G +G+ E A RVFE + G+ P+A + LI + G+ Q+A + M
Sbjct: 448 TCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVM 507
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
K G++P C ++ K ++ A ++L+++ G
Sbjct: 508 DKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGL 547
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 117/296 (39%), Gaps = 43/296 (14%)
Query: 139 LAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKR 198
+ + K K+ E YL + ++E + N+ Y +IHGY K ++Q A+ M
Sbjct: 524 IGLCKSRKMEEAKDYL----VEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLG 579
Query: 199 RGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPL--DKRSYGSMVMAYVRAGML 256
G + V T ++ Y K G+ A F +LG + D R+Y +++ +R G L
Sbjct: 580 CGIAPNDVVCTALIDGYCKEGSTTEATSIFR--CMLGRSVHPDVRTYSALIHGLLRNGKL 637
Query: 257 DRGEVLLREMDAQ----EVYVGSEV-------------------------------YKAL 281
LL E + +V+ + + Y AL
Sbjct: 638 QGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNAL 697
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+ G G E A+ +F+ I G+ +A A +I+ Y +G KA+ F M G+
Sbjct: 698 INGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGV 757
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
P + ++ C KE +AL ++ + GF + + + K V+E
Sbjct: 758 PPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVIE 813
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 95/208 (45%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
A++ Y+ +I G+GK+ + A+ L M +G V T ++ + + G+ A
Sbjct: 304 ADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRV 363
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
EE+ G L+ +Y ++V + G +++ + LL EM + ++ Y ++ GY
Sbjct: 364 KEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLK 423
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
N+ + + ++ + + P A C ++IN G + A F+ M G++P+
Sbjct: 424 EQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVI 483
Query: 348 VALILSACEKENQLNRALEFLIDLERDG 375
++ +E + A+ L +++ G
Sbjct: 484 YTTLIKGHVQEGRFQEAVRILKVMDKKG 511
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 109/279 (39%), Gaps = 34/279 (12%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+ ++ NI Y +I+G K +I+ A + +G + VT ++ Y K+GN
Sbjct: 682 MCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGN 741
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMA------------------------------- 249
L A F+E+ L G P D Y +++
Sbjct: 742 LSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNAL 801
Query: 250 ---YVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGI 306
+ ++G + LL +M + V Y L+ + G + A++ F +Q +
Sbjct: 802 MDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNL 861
Query: 307 TPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALE 366
P+A L++ Y MAG+ + + F M +EP ++++ A KE + L+
Sbjct: 862 MPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLK 921
Query: 367 FLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ D+ + G V K L R V EV VL +
Sbjct: 922 LVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEK 960
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 86/196 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G K +++ A++ L+ M RG + T ++ Y K+G +++A+ F+E+
Sbjct: 519 YNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEML 578
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +++ Y + G + R M + V+ Y AL+ G NG +
Sbjct: 579 GCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQ 638
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
GA + G+ PD +I+ + G KA+ + M + G+ P+ ++
Sbjct: 639 GAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALI 698
Query: 353 SACEKENQLNRALEFL 368
+ K ++ RA E
Sbjct: 699 NGLCKAGEIERARELF 714
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 100/233 (42%), Gaps = 3/233 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I G K+ + A + L ++GF +L ++ + K+G + A + E++
Sbjct: 764 YSALIDGCRKEGNTEKALSLFLESVQKGF-ASTSSLNALMDGFCKSGKVIEANQLLEDMV 822
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
D +Y ++ + + G L E +M + + + Y ALL GY+M G
Sbjct: 823 DKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRS 882
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM-RKAGLEPSDKCVALI 351
+F+ + I PD +++I+A+ G K +M +K G + C LI
Sbjct: 883 EMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLI 942
Query: 352 LSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
C KE ++ L+ L +E G + TL F + G ++ VL+
Sbjct: 943 DPLCRKE-HVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLK 994
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 101/257 (39%), Gaps = 39/257 (15%)
Query: 160 ALLEESFEANIR----DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
ALL E I+ Y +I GY K+ ++ L MK+ + T +++
Sbjct: 397 ALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGL 456
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQ------ 269
+ G+++ A FE + LG + Y +++ +V+ G +L+ MD +
Sbjct: 457 CRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDV 516
Query: 270 ----EVYVG-------------------------SEVYKALLRGYSMNGNSEGAQRVFEA 300
V +G Y AL+ GY +G + A R F+
Sbjct: 517 LCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKE 576
Query: 301 IQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQ 360
+ GI P+ +C LI+ Y G + +A + F+ M + P + + ++ + +
Sbjct: 577 MLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGK 636
Query: 361 LNRALEFLIDLERDGFM 377
L A+E L + G +
Sbjct: 637 LQGAMELLSEFLEKGLV 653
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 102/248 (41%), Gaps = 15/248 (6%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I G+ ++ + Q A L M ++G D + +++ K+ ++ A++ E+
Sbjct: 484 YTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMI 543
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +YG+++ Y ++G + + +EM + V AL+ GY G++
Sbjct: 544 ERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTT 603
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +F + + PD R + LI+ G+ Q A + GL P I+
Sbjct: 604 EATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSII 663
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEAS---CTLAAWFKRLGVVEEVEHVLREYGLR 409
S K+ + +A + +M K S T A L E+E R
Sbjct: 664 SGFCKQGGIGKAFQL------HEYMCQKGISPNIITYNALINGLCKAGEIERA------R 711
Query: 410 ETYSKIPG 417
E + IPG
Sbjct: 712 ELFDGIPG 719
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 103/247 (41%), Gaps = 6/247 (2%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+LE + ++ YT +I+ + + + + L M+ +G VT V++ +AG
Sbjct: 226 GMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAG 285
Query: 220 NLKMAEETFEEIKLL---GEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
+ +E FE KL+ G D +Y ++ + + +++L EM ++ + G
Sbjct: 286 EV---DEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHV 342
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
Y AL+ G+ G+S A RV E + G+ + L+ G +KA M
Sbjct: 343 AYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEM 402
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVV 396
G++P + ++ KE +R + L ++++ + + R G +
Sbjct: 403 IMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSI 462
Query: 397 EEVEHVL 403
E+ V
Sbjct: 463 EDASRVF 469
>gi|357153691|ref|XP_003576535.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
chloroplastic-like [Brachypodium distachyon]
Length = 936
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 91/199 (45%), Gaps = 1/199 (0%)
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
T+ +++ +Y K GNL AE TF +++ +Y +M+ Y R+G+ D+ E ++ M
Sbjct: 272 TVGMLMGLYQKTGNLSEAEFTFAKMRECNVKC-INAYSAMITLYTRSGLFDKSEEVIVLM 330
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
+ +V E + L YS G E A+ + +++ G++P+ LI Y
Sbjct: 331 NDDKVIANLENWLVQLNAYSQQGKMEEAKLILQSMVDEGVSPNVVAFNTLITGYGKVSDM 390
Query: 327 QKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
QKA F ++ KAGL P + ++ + ++ + AL + L+ GF T+
Sbjct: 391 QKAKEVFNSLEKAGLAPDETTYRSMIEGFGRADKYDEALLYYRKLKESGFQPNASNFYTM 450
Query: 387 AAWFKRLGVVEEVEHVLRE 405
R E +L++
Sbjct: 451 INLIARHDENESAAEILKD 469
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 87/196 (44%), Gaps = 1/196 (0%)
Query: 180 YGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLD 239
YGK A+ + M R+ D ++ ++ Y+ +G+ + ++++ G P+
Sbjct: 734 YGKAGLFNRAQK-VFNMARKQGQADIISYNTIIAAYAHSGDFRSMTYFVQKMQDAGFPVS 792
Query: 240 KRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFE 299
+Y M+ AY +AG L+ +L++M + Y +L Y G EG V
Sbjct: 793 LEAYNCMLNAYGKAGQLEEFAAVLQKMRRAKCDFDHYTYNIMLNIYGRKGWIEGVAYVLS 852
Query: 300 AIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKEN 359
++ G+ PD LI AY +AG + A Q MR G+ +++A ++
Sbjct: 853 ELKSRGVEPDLYSYNTLIKAYGIAGMPEDAVKLMQEMRLKGINADRITYTNLIAALQRNE 912
Query: 360 QLNRALEFLIDLERDG 375
A+++ + +++ G
Sbjct: 913 NFLEAVKWSLWMKQTG 928
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 95/211 (45%), Gaps = 1/211 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L+ + N+ ++ Y K + AE T M+ C + M+ +Y+++G
Sbjct: 261 MLDREVQPNVSTVGMLMGLYQKTGNLSEAEFTFAKMRECNVKCIN-AYSAMITLYTRSGL 319
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+EE + + ++ + AY + G ++ +++L+ M + V +
Sbjct: 320 FDKSEEVIVLMNDDKVIANLENWLVQLNAYSQQGKMEEAKLILQSMVDEGVSPNVVAFNT 379
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ GY + + A+ VF +++ AG+ PD +I + A + +A ++ ++++G
Sbjct: 380 LITGYGKVSDMQKAKEVFNSLEKAGLAPDETTYRSMIEGFGRADKYDEALLYYRKLKESG 439
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDL 371
+P+ +++ + ++ A E L D+
Sbjct: 440 FQPNASNFYTMINLIARHDENESAAEILKDM 470
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/273 (18%), Positives = 114/273 (41%), Gaps = 9/273 (3%)
Query: 137 DWLAVL----KQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENT 192
+WL L +Q K+ E L LQ ++++E N+ + +I GYGK +Q A+
Sbjct: 341 NWLVQLNAYSQQGKMEEAKLILQ----SMVDEGVSPNVVAFNTLITGYGKVSDMQKAKEV 396
Query: 193 LLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVR 252
++++ G D+ T M+ + +A A + ++K G + ++ +M+ R
Sbjct: 397 FNSLEKAGLAPDETTYRSMIEGFGRADKYDEALLYYRKLKESGFQPNASNFYTMINLIAR 456
Query: 253 AGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARM 312
+ +L++M A S + L+R Y+ G + ++ + I DA
Sbjct: 457 HDENESAAEILKDMMAAGCQC-SSIITILVRAYAQVGGMNKVLPILQSCFYKKILFDATS 515
Query: 313 CALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLE 372
C++L+ + ++A + + + D +++ +C++ + A+ ++
Sbjct: 516 CSILVTLFVQNSLLEEALCVLREKKWKDSDFEDNLYHILVCSCKEAGSYDAAVSIYNEMP 575
Query: 373 RDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ SC++ F + + E + E
Sbjct: 576 KSKLHPNLRISCSMIDVFSTMERFTDAETLYLE 608
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 65/155 (41%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
+A+I Y II Y ++ + M+ GF M+ Y KAG L+
Sbjct: 755 QADIISYNTIIAAYAHSGDFRSMTYFVQKMQDAGFPVSLEAYNCMLNAYGKAGQLEEFAA 814
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
++++ D +Y M+ Y R G ++ +L E+ ++ V Y L++ Y
Sbjct: 815 VLQKMRRAKCDFDHYTYNIMLNIYGRKGWIEGVAYVLSELKSRGVEPDLYSYNTLIKAYG 874
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQ 321
+ G E A ++ + ++ GI D LI A Q
Sbjct: 875 IAGMPEDAVKLMQEMRLKGINADRITYTNLIAALQ 909
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 57/128 (44%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+ F ++ Y +++ YGK Q++ L M+R D T +M+ +Y + G ++
Sbjct: 786 DAGFPVSLEAYNCMLNAYGKAGQLEEFAAVLQKMRRAKCDFDHYTYNIMLNIYGRKGWIE 845
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
E+K G D SY +++ AY AGM + L++EM + + Y L+
Sbjct: 846 GVAYVLSELKSRGVEPDLYSYNTLIKAYGIAGMPEDAVKLMQEMRLKGINADRITYTNLI 905
Query: 283 RGYSMNGN 290
N N
Sbjct: 906 AALQRNEN 913
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/168 (19%), Positives = 75/168 (44%), Gaps = 1/168 (0%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
AN+ ++ ++ Y ++ +++ A+ L +M G + V ++ Y K +++ A+E
Sbjct: 337 ANLENWLVQLNAYSQQGKMEEAKLILQSMVDEGVSPNVVAFNTLITGYGKVSDMQKAKEV 396
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
F ++ G D+ +Y SM+ + RA D + R++ + + ++ +
Sbjct: 397 FNSLEKAGLAPDETTYRSMIEGFGRADKYDEALLYYRKLKESGFQPNASNFYTMINLIAR 456
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
+ +E A + + + AG + + +L+ AY G K Q+
Sbjct: 457 HDENESAAEILKDMMAAGCQCSS-IITILVRAYAQVGGMNKVLPILQS 503
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 4/239 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+R +I + + +AE L +K + D + +V+V MY+KAG + A
Sbjct: 582 NLRISCSMIDVFSTMERFTDAETLYLELKTSACVLDMIAYSVIVRMYTKAGRPEDACSVL 641
Query: 229 EEIKLLGEPL-DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
E+++ E + DK + M+ Y + G+L++ + +V + ++
Sbjct: 642 EDMEKQKEIVPDKYLFLDMLRTYQKCGLLEKLTDTYYWILKSQVECDEAMNNCIINCCGP 701
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
+ R+F+ + G +L++ Y AG +A F RK G +
Sbjct: 702 AIPVDELTRIFDEMIQLGHMASTITLNVLLDIYGKAGLFNRAQKVFNMARKQG-QADIIS 760
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEA-SCTLAAWFKRLGVVEEVEHVLRE 405
I++A F+ ++ GF V EA +C L A + + G +EE VL++
Sbjct: 761 YNTIIAAYAHSGDFRSMTYFVQKMQDAGFPVSLEAYNCMLNA-YGKAGQLEEFAAVLQK 818
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/261 (17%), Positives = 108/261 (41%), Gaps = 8/261 (3%)
Query: 152 LYLQVAELALLEESF----EANIR---DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICD 204
LY + L+ E +F E N++ Y+ +I Y + +E ++ M I +
Sbjct: 279 LYQKTGNLSEAEFTFAKMRECNVKCINAYSAMITLYTRSGLFDKSEEVIVLMNDDKVIAN 338
Query: 205 QVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLR 264
V + YS+ G ++ A+ + + G + ++ +++ Y + + + + +
Sbjct: 339 LENWLVQLNAYSQQGKMEEAKLILQSMVDEGVSPNVVAFNTLITGYGKVSDMQKAKEVFN 398
Query: 265 EMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAG 324
++ + Y++++ G+ + A + ++ +G P+A +IN
Sbjct: 399 SLEKAGLAPDETTYRSMIEGFGRADKYDEALLYYRKLKESGFQPNASNFYTMINLIARHD 458
Query: 325 QSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASC 384
+++ A ++M AG + S + +++ A + +N+ L L + +
Sbjct: 459 ENESAAEILKDMMAAGCQCS-SIITILVRAYAQVGGMNKVLPILQSCFYKKILFDATSCS 517
Query: 385 TLAAWFKRLGVVEEVEHVLRE 405
L F + ++EE VLRE
Sbjct: 518 ILVTLFVQNSLLEEALCVLRE 538
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 104/232 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+GY K + NA L MK G D+ T +V +SK G L+ A F+E+
Sbjct: 446 YNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMV 505
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + SY +++ + + G +D LL+ M+ E Y A++ G S
Sbjct: 506 ECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFS 565
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+++ + + G+ P+ LI+ G++Q A+ F +M K P+ + ++
Sbjct: 566 EAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLI 625
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
+E + + A L ++ER G + +L F LG ++ +LR
Sbjct: 626 YGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLR 677
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 71/153 (46%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I+G K+ + AE M +G + + +T T ++ + G + A + F
Sbjct: 547 NVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIF 606
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+++ + +Y S++ + G D E+LL+EM+ + + + +L+ G+ +
Sbjct: 607 HDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVL 666
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQ 321
G + A + + G P+ R ++L+ Q
Sbjct: 667 GRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQ 699
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/183 (19%), Positives = 79/183 (43%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E E + Y +++ G+ K ++++A M G + V+ T ++ +SK G +
Sbjct: 471 ENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVD 530
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
+A + ++ +G + SY +++ + E + +M Q + Y L+
Sbjct: 531 IALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLI 590
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G NG ++ A ++F ++ P+ + LI G++ +A + M + GL
Sbjct: 591 DGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLA 650
Query: 343 PSD 345
P +
Sbjct: 651 PDE 653
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 46/245 (18%), Positives = 100/245 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++E + N Y+ +I+G + ++ A + L M +G T T+ + +
Sbjct: 259 MVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEH 318
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A E +K G + ++Y +++ R G L+ L +M + + + Y A
Sbjct: 319 EEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNA 378
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ + G A ++F ++ G + + +I + G +KA F+ M K G
Sbjct: 379 LINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMG 438
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
P+ +++ + +N A L ++ +G + L + F + G +E
Sbjct: 439 PLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESAS 498
Query: 401 HVLRE 405
+E
Sbjct: 499 FYFQE 503
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 56/124 (45%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E+ N+ YT +I G + + Q A M++R + + T + ++ + G
Sbjct: 574 MVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGK 633
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
AE +E++ G D+ ++ S++ +V G +D +LLR M Y
Sbjct: 634 ADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSV 693
Query: 281 LLRG 284
LL+G
Sbjct: 694 LLKG 697
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 70/156 (44%)
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI 301
++ +++ + G + E++L ++ ++ Y +L+ G+ N N + A VF+ +
Sbjct: 200 TFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRM 259
Query: 302 QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQL 361
G P++ + LIN G+ +A + M + G+EP+ L ++A
Sbjct: 260 VKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHE 319
Query: 362 NRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
A+E + +++ G + L + RLG +E
Sbjct: 320 EEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLE 355
>gi|242086476|ref|XP_002443663.1| hypothetical protein SORBIDRAFT_08g023090 [Sorghum bicolor]
gi|241944356|gb|EES17501.1| hypothetical protein SORBIDRAFT_08g023090 [Sorghum bicolor]
Length = 853
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 6/204 (2%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
LY ++ E+ L ++F Y+ +++ GK Q+ A M G + VT +M
Sbjct: 452 LYGRMQEVGLSPDTFT-----YSAMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIM 506
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ + +KA N + + ++++++ G DK +Y ++ G LD E + EM ++
Sbjct: 507 IALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEM-RRDW 565
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
VY L+ + GN + A ++A+ G+ P+ C L++A+ + Q AY
Sbjct: 566 APDEPVYGLLVDLWGKAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAFLKMNRFQDAYI 625
Query: 332 AFQNMRKAGLEPSDKCVALILSAC 355
QNM GL PS + L+LS C
Sbjct: 626 VLQNMLAQGLVPSVQTYTLLLSCC 649
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 109/249 (43%), Gaps = 5/249 (2%)
Query: 161 LLEESFEANIR----DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS 216
LL+E A+ + Y +IIH YG+ ++ A M+ G+ D+VT ++ +++
Sbjct: 382 LLDEMSRAHCKPTVVTYNRIIHAYGRANYLKEAVKVFEEMQEAGYEPDRVTYCTLIDIHA 441
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
KAG L +A + + ++ +G D +Y +MV + G L L EM
Sbjct: 442 KAGYLDIAMDLYGRMQEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIENGCTPNLV 501
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
Y ++ + N E ++++ +Q AG PD ++++ G +A F M
Sbjct: 502 TYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEM 561
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVV 396
R+ P + L++ K +++AL + + +DG +L + F ++
Sbjct: 562 RR-DWAPDEPVYGLLVDLWGKAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAFLKMNRF 620
Query: 397 EEVEHVLRE 405
++ VL+
Sbjct: 621 QDAYIVLQN 629
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 94/228 (41%)
Query: 147 LMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQV 206
L +H + L + + F+ + YT +I G+ Q + L M R V
Sbjct: 337 LHDHTVALGFFQWLKRQPGFKHDGHTYTTMIGILGQARQFGVLKKLLDEMSRAHCKPTVV 396
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
T ++ Y +A LK A + FEE++ G D+ +Y +++ + +AG LD L M
Sbjct: 397 TYNRIIHAYGRANYLKEAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRM 456
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
+ + Y A++ G A ++F + G TP+ ++I A
Sbjct: 457 QEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIMIALQAKARNY 516
Query: 327 QKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
+ +++M+ AG P ++++ L+ A I++ RD
Sbjct: 517 ENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRRD 564
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 84/211 (39%), Gaps = 1/211 (0%)
Query: 196 MKRR-GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG 254
+KR+ GF D T T M+ + +A + ++ +E+ +Y ++ AY RA
Sbjct: 350 LKRQPGFKHDGHTYTTMIGILGQARQFGVLKKLLDEMSRAHCKPTVVTYNRIIHAYGRAN 409
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
L + EM Y L+ ++ G + A ++ +Q G++PD +
Sbjct: 410 YLKEAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQEVGLSPDTFTYS 469
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
++N GQ AY F M + G P+ ++++ K ++ D++
Sbjct: 470 AMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVA 529
Query: 375 GFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
GF K + G ++E E V E
Sbjct: 530 GFRPDKITYSIVMEVLGHCGHLDEAEAVFIE 560
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 106/245 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+ EE E ++ YT ++ GK ++ +A AM ++ + D VT + ++ K G
Sbjct: 764 MTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGR 823
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ A FE G + Y S++ ++ + GM+DR L EM ++ Y
Sbjct: 824 VEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNN 883
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL G + G A+++ E ++ G PD +LI+ G +A + F+ M++ G
Sbjct: 884 LLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKG 943
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+ P ++ + K ++L A E +E +G+ L R G V E
Sbjct: 944 IVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAA 1003
Query: 401 HVLRE 405
+ E
Sbjct: 1004 MIFHE 1008
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 141/331 (42%), Gaps = 17/331 (5%)
Query: 86 EEQKQAISQFPRKMTKRCKA------FVKQIICVSPETGNLSDLLAAWVR-FMKPRRADW 138
+++++++S F + K C A V +C S + D+ M+P ++
Sbjct: 612 DQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNY 671
Query: 139 LAVLKQLKLMEH-----PLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTL 193
+L L E ++ ++ E +L+ ++F NI +++G K ++ A +
Sbjct: 672 KTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNI-----MVNGLVKSNRVDEACKLV 726
Query: 194 LAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRA 253
+MK + + D T T ++ K+G L+ A F ++ G D +Y S++ +
Sbjct: 727 DSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKG 786
Query: 254 GMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
G L ++ R M + Y +L+ G E A FE G TP+ +
Sbjct: 787 GKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVY 846
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
+ LI+++ G +A F+ M++ P+ +LS K +LN A + L ++E+
Sbjct: 847 SSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEK 906
Query: 374 DGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
G + L ++G+V+E E +
Sbjct: 907 VGCVPDLVTYNILIDGVGKMGMVDEAESYFK 937
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 85/198 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y+ +I +GKK + A M+RR + VT ++ +KAG L +AE+
Sbjct: 842 NVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLL 901
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
EE++ +G D +Y ++ + GM+D E + M + + + +L+
Sbjct: 902 EEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKV 961
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
A +F++++ G P +LI+ AG+ +A F M+ G P +
Sbjct: 962 DKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITI 1021
Query: 349 ALILSACEKENQLNRALE 366
++ Q ALE
Sbjct: 1022 GIMKRILSVREQQFHALE 1039
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 93/212 (43%), Gaps = 6/212 (2%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
+H + + ++ A + M + G T TV++ K+GN+ A + F +K L
Sbjct: 293 FVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLR 352
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
+ +Y ++V +AG L+ + EM + Y L+ G G ++ A
Sbjct: 353 CSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMAC 412
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
+F+ ++ G+ P+ R ++I+ AG+ +A+ F ++++ G P ++
Sbjct: 413 GLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVL 472
Query: 356 EKENQLNRALEFLIDLERDGFMVGKEASCTLA 387
K Q+++ L + + MV K C ++
Sbjct: 473 GKGGQMDKVLAIIKE------MVEKGGECIIS 498
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 103/241 (42%), Gaps = 4/241 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y+ +I GK+ +++ A +G + + ++ + K G + A E F
Sbjct: 807 DVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELF 866
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
EE++ P + +Y +++ +AG L+ E LL EM+ Y L+ G
Sbjct: 867 EEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKM 926
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A+ F+ ++ GI PD LI + + +A F +M + G PS
Sbjct: 927 GMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTY 986
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGL 408
+++ + +++ A +++ G M T+ + L V E+ H L E GL
Sbjct: 987 NVLIDILGRAGKVHEAAMIFHEMKVKGCM---PDGITIGIMKRILSVREQQFHALEE-GL 1042
Query: 409 R 409
R
Sbjct: 1043 R 1043
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 86/202 (42%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D T + V ++++G L A E +E+ G ++ ++ A V++G +D
Sbjct: 286 DAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFF 345
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
M Y L+ G + G E A VF ++ +PDA LI+ A
Sbjct: 346 NGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKA 405
Query: 324 GQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEAS 383
G++ A F+ M+ GL P+ + +++S K + A + DL+ G +
Sbjct: 406 GEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTY 465
Query: 384 CTLAAWFKRLGVVEEVEHVLRE 405
TL + G +++V +++E
Sbjct: 466 NTLIDVLGKGGQMDKVLAIIKE 487
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 94/200 (47%), Gaps = 2/200 (1%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E ++ Y+ ++ + K+ Q + + + M R+G + D T ++++ K+ ++ A +
Sbjct: 595 EPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALD 654
Query: 227 TFEEIKLLG-EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F +K G EPL +Y +++ + V+ +D + E+ + + VY ++ G
Sbjct: 655 VFGRMKEEGMEPL-LGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGL 713
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
+ + A ++ ++++ I PD L++ +G+ ++A+ F M + G EP
Sbjct: 714 VKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDV 773
Query: 346 KCVALILSACEKENQLNRAL 365
++ K +L+ AL
Sbjct: 774 VAYTSLMDVLGKGGKLSHAL 793
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 86/196 (43%), Gaps = 8/196 (4%)
Query: 181 GKKMQIQNAENTL----LAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGE 236
G + I+ A+ T+ L K G ++T ++ + G++ A + E +K
Sbjct: 504 GHEGTIEGADRTVEYPSLGFKSLG----EITYNTLMSAFIHNGHVDEAVKLLEVMKKHEC 559
Query: 237 PLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQR 296
+Y ++V +AG LD LLREM+ Q Y +L+ + E +
Sbjct: 560 IPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLS 619
Query: 297 VFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACE 356
+F+ + G D +L+IN + +A F M++ G+EP +LS+
Sbjct: 620 LFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLV 679
Query: 357 KENQLNRALEFLIDLE 372
K+ +++ AL+ +L+
Sbjct: 680 KDEKIDFALQIFNELQ 695
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 72/182 (39%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ + + +T +I K I A MK + VT T +V +KAG
Sbjct: 313 MIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGR 372
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ A E F E+K D +Y +++ +AG D L +EM + + Y
Sbjct: 373 LEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNI 432
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G A ++F ++ G PD LI+ GQ K + M + G
Sbjct: 433 MISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKG 492
Query: 341 LE 342
E
Sbjct: 493 GE 494
>gi|224129154|ref|XP_002320514.1| predicted protein [Populus trichocarpa]
gi|222861287|gb|EEE98829.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 91/200 (45%), Gaps = 3/200 (1%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+ E N+ + +IHG+ K+ ++ A MK + VT ++ Y + GN
Sbjct: 262 KNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYNTLINGYGQVGNSN 321
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
MA + +EE+ G D +Y ++++ + G + L++E+D + + + Y AL+
Sbjct: 322 MAGKVYEEMMRNGVKADILTYNALILGLCKEGKTKKAAFLVKELDKENLVPNASTYSALI 381
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G NS+ A ++++++ +G P+ + +L +A+ + A+ +M +
Sbjct: 382 SGQCARKNSDRAFQLYKSMVRSGCHPNEQTFKMLTSAFVKNEDFEGAFNVLMDMFARSMA 441
Query: 343 PSDKCVALI---LSACEKEN 359
+ I L C KEN
Sbjct: 442 SDSNTLLEIYDGLCQCGKEN 461
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 88/203 (43%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I G+ K + A M + G + VT ++ + K G L A F
Sbjct: 233 NVVSYNTLIAGHCNKGLLSIATKLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFF 292
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E+K++ + +Y +++ Y + G + + EM V Y AL+ G
Sbjct: 293 SEMKVMNVTPNTVTYNTLINGYGQVGNSNMAGKVYEEMMRNGVKADILTYNALILGLCKE 352
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G ++ A + + + + P+A + LI+ S +A+ +++M ++G P+++
Sbjct: 353 GKTKKAAFLVKELDKENLVPNASTYSALISGQCARKNSDRAFQLYKSMVRSGCHPNEQTF 412
Query: 349 ALILSACEKENQLNRALEFLIDL 371
++ SA K A L+D+
Sbjct: 413 KMLTSAFVKNEDFEGAFNVLMDM 435
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 80/183 (43%), Gaps = 2/183 (1%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M+R + T +++ K+G L+ A E E++ +G + SY +++ + G+
Sbjct: 190 MRRCRISPNSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHCNKGL 249
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
L L M + + +L+ G+ G A R F ++ +TP+
Sbjct: 250 LSIATKLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYNT 309
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV-ALILSACEKENQLNRALEFLIDLERD 374
LIN Y G S A ++ M + G++ ALIL C KE + +A + +L+++
Sbjct: 310 LINGYGQVGNSNMAGKVYEEMMRNGVKADILTYNALILGLC-KEGKTKKAAFLVKELDKE 368
Query: 375 GFM 377
+
Sbjct: 369 NLV 371
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 85/208 (40%), Gaps = 2/208 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N + ++ K +++ A L M+ G + V+ ++ + G L +A +
Sbjct: 198 NSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHCNKGLLSIATKLK 257
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ G + ++ S++ + + G L EM V + Y L+ GY
Sbjct: 258 NLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYNTLINGYGQV 317
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
GNS A +V+E + G+ D LI G+++KA + + K L P+
Sbjct: 318 GNSNMAGKVYEEMMRNGVKADILTYNALILGLCKEGKTKKAAFLVKELDKENLVPNASTY 377
Query: 349 -ALILSACEKENQLNRALEFLIDLERDG 375
ALI C ++N +RA + + R G
Sbjct: 378 SALISGQCARKNS-DRAFQLYKSMVRSG 404
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 50/112 (44%)
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
V+ +L + Y+ A VF ++ G P C +++ + A T ++ M
Sbjct: 131 VFDSLFKTYAHMNKFRNATDVFSRMKDYGFLPTVESCNAYLSSLLDFHRVDIALTFYREM 190
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAA 388
R+ + P+ L+LSA K +L +A+E L ++E G + TL A
Sbjct: 191 RRCRISPNSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIA 242
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 115/263 (43%), Gaps = 18/263 (6%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRD 172
++P+ S L+ +V+ K R A+ L H +++ +
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEEL----------HK--------EMIQRGISPDTVT 354
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I G+ K+ Q+ A + L M +G + T +++ Y KA + E F ++
Sbjct: 355 YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS 414
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
L G D +Y +++ + G L+ + L +EM ++ V YK LL G NG E
Sbjct: 415 LRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPE 474
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +FE I+ + + D + ++I+ A + A+ F ++ G++P K +++
Sbjct: 475 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMI 534
Query: 353 SACEKENQLNRALEFLIDLERDG 375
K+ L+ A +E DG
Sbjct: 535 GGLCKKGSLSEADLLFRKMEEDG 557
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 103/245 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E F+ N Y ++ K Q A L M+ R D V ++++ K G+
Sbjct: 203 MVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGS 262
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A F E+++ G D Y +++ + AG D G LLR+M +++ + A
Sbjct: 263 LDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSA 322
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ + G A+ + + + GI+PD LI+ + Q KA M G
Sbjct: 323 LIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
P+ + ++++ K N ++ LE + G + TL F LG +E +
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAK 442
Query: 401 HVLRE 405
+ +E
Sbjct: 443 ELFQE 447
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/317 (19%), Positives = 132/317 (41%), Gaps = 28/317 (8%)
Query: 62 DMGKTQVKDDTSMFTWIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETGNLS 121
DM K ++ D F+ + I + E + + + ++M +R +SP+T +
Sbjct: 307 DMIKRKITPDVVAFSAL-IDCFVKEGKLREAEELHKEMIQRG---------ISPDTVTYT 356
Query: 122 DLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYG 181
L+ + + QL H L L V++ NIR + +I+GY
Sbjct: 357 SLIDGFCKE------------NQLDKANHMLDLMVSK------GCGPNIRTFNILINGYC 398
Query: 182 KKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKR 241
K I + M RG + D VT ++ + + G L++A+E F+E+ D
Sbjct: 399 KANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIV 458
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI 301
SY ++ G ++ + +++ ++ + +Y ++ G + A +F ++
Sbjct: 459 SYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL 518
Query: 302 QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQL 361
G+ PD + ++I G +A F+ M + G P+ +++ A E
Sbjct: 519 PLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDA 578
Query: 362 NRALEFLIDLERDGFMV 378
++ + + +++R GF V
Sbjct: 579 TKSAKLIEEIKRCGFSV 595
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 86/210 (40%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ F+A+I YT +I G+ + + L M +R D V + ++ + K G L+
Sbjct: 276 KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
AEE +E+ G D +Y S++ + + LD+ +L M ++ + L+
Sbjct: 336 AEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
GY + +F + G+ D LI + G+ + A FQ M + P
Sbjct: 396 GYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRP 455
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLER 373
++L + +ALE +E+
Sbjct: 456 DIVSYKILLDGLCDNGEPEKALEIFEKIEK 485
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 85/193 (44%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
+++G ++ +A + M GF ++VT ++ + K+G +A E +++
Sbjct: 183 LVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERK 242
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
LD Y ++ + G LD L EM+ + +Y L+RG+ G +
Sbjct: 243 IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGA 302
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
++ + ITPD + LI+ + G+ ++A + M + G+ P ++
Sbjct: 303 KLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGF 362
Query: 356 EKENQLNRALEFL 368
KENQL++A L
Sbjct: 363 CKENQLDKANHML 375
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/243 (17%), Positives = 102/243 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ +E + ++ +I+G + ++ A + M G +TL +V G
Sbjct: 133 IIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGK 192
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + + G ++ +YG ++ ++G LLR+M+ +++ + + Y
Sbjct: 193 VSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSI 252
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G +G+ + A +F ++ G D + LI + AG+ ++M K
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+ P + ++ KE +L A E ++ + G +L F + +++
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372
Query: 401 HVL 403
H+L
Sbjct: 373 HML 375
>gi|147825385|emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
Length = 821
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 117/293 (39%), Gaps = 37/293 (12%)
Query: 149 EHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTL 208
+H + L++ + +EE + ++R +T I+H Y + + + A M++ G VT
Sbjct: 189 QHSVALRLLDEISVEE-YSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTY 247
Query: 209 TVMVVMYSKAGN------------------------------------LKMAEETFEEIK 232
VM+ +Y K G L A + F +K
Sbjct: 248 NVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLK 307
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G +Y S++ + +AG+ +L+EM+ Y L+ Y G E
Sbjct: 308 SEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHE 367
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
+ + GI P+A +INAY AG+ KA + F+ M+++G P+ IL
Sbjct: 368 EGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAIL 427
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
K+++L ++ L D+ +G T+ A G+ + V V RE
Sbjct: 428 GMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFRE 480
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 83/204 (40%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +++ Y + + + + M R+G + + +T T ++ Y KAG A F ++K
Sbjct: 353 YNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMK 412
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +Y +++ + L+ +L +M + S + +L G +
Sbjct: 413 ESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHK 472
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
RVF ++ G P+ LI AY G ++ M KAG P +L
Sbjct: 473 YVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALL 532
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
+A + A ++D++ GF
Sbjct: 533 NALARRGDWEAAESVILDMKSKGF 556
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/246 (19%), Positives = 107/246 (43%), Gaps = 6/246 (2%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ F + Y +++ ++ + AE+ +L MK +GF ++ + ++M+ Y+K GN
Sbjct: 516 MIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGN 575
Query: 221 LKMAEETFEEI---KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
+ E+ EEI + + R ++V+A + L E +E +
Sbjct: 576 GRGIEKIEEEIYNGHIFPSWILLR---TLVLANFKRRALMGMERAFQEFCKHGYKPDLVL 632
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
+ ++L ++ N + A + I+ +G+ PD L++ Y G+ K + ++
Sbjct: 633 FNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQ 692
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
K+G +P ++ ++ + A+ L ++ G T A + G+
Sbjct: 693 KSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFS 752
Query: 398 EVEHVL 403
EVE V+
Sbjct: 753 EVEEVI 758
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/174 (18%), Positives = 68/174 (39%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+ ++ ++ + ++ + K A L ++ G D VT ++ MY++ G
Sbjct: 623 KHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECW 682
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
EE + I+ G D SY +++ + R G++ L EM + Y +
Sbjct: 683 KGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFV 742
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
GYS G + V + P+ ++++ Y + ++A N+
Sbjct: 743 AGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAMDFVSNI 796
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 35/190 (18%), Positives = 72/190 (37%)
Query: 182 KKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKR 241
K+ + E + G+ D V M+ +++K A E I+ G D
Sbjct: 607 KRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLV 666
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI 301
+Y S++ Y R G +GE +L+ + Y +++G+ G + A R +
Sbjct: 667 TYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEM 726
Query: 302 QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQL 361
+GI P + Y G + M + P++ +++ K +
Sbjct: 727 TISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKY 786
Query: 362 NRALEFLIDL 371
A++F+ ++
Sbjct: 787 KEAMDFVSNI 796
>gi|225445998|ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
[Vitis vinifera]
gi|297735424|emb|CBI17864.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 117/293 (39%), Gaps = 37/293 (12%)
Query: 149 EHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTL 208
+H + L++ + +EE + ++R +T I+H Y + + + A M++ G VT
Sbjct: 189 QHSVALRLLDEISVEE-YSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTY 247
Query: 209 TVMVVMYSKAGN------------------------------------LKMAEETFEEIK 232
VM+ +Y K G L A + F +K
Sbjct: 248 NVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLK 307
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G +Y S++ + +AG+ +L+EM+ Y L+ Y G E
Sbjct: 308 SEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHE 367
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
+ + GI P+A +INAY AG+ KA + F+ M+++G P+ IL
Sbjct: 368 EGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAIL 427
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
K+++L ++ L D+ +G T+ A G+ + V V RE
Sbjct: 428 GMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFRE 480
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 83/204 (40%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +++ Y + + + + M R+G + + +T T ++ Y KAG A F ++K
Sbjct: 353 YNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMK 412
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +Y +++ + L+ +L +M + S + +L G +
Sbjct: 413 ESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHK 472
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
RVF ++ G P+ LI AY G ++ M KAG P +L
Sbjct: 473 YVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALL 532
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
+A + A ++D++ GF
Sbjct: 533 NALARRGDWEAAESVILDMKSKGF 556
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/246 (19%), Positives = 107/246 (43%), Gaps = 6/246 (2%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ F + Y +++ ++ + AE+ +L MK +GF ++ + ++M+ Y+K GN
Sbjct: 516 MIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGN 575
Query: 221 LKMAEETFEEI---KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
+ E+ EEI + + R ++V+A + L E +E +
Sbjct: 576 GRGIEKIEEEIYNGHIFPSWILLR---TLVLANFKRRALMGMERAFQEFCKHGYKPDLVL 632
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
+ ++L ++ N + A + I+ +G+ PD L++ Y G+ K + ++
Sbjct: 633 FNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQ 692
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
K+G +P ++ ++ + A+ L ++ G T A + G+
Sbjct: 693 KSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFS 752
Query: 398 EVEHVL 403
EVE V+
Sbjct: 753 EVEEVI 758
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/174 (18%), Positives = 68/174 (39%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+ ++ ++ + ++ + K A L ++ G D VT ++ MY++ G
Sbjct: 623 KHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECW 682
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
EE + I+ G D SY +++ + R G++ L EM + Y +
Sbjct: 683 KGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFV 742
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
GYS G + V + P+ ++++ Y + ++A N+
Sbjct: 743 AGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAMDFVSNI 796
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 35/190 (18%), Positives = 72/190 (37%)
Query: 182 KKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKR 241
K+ + E + G+ D V M+ +++K A E I+ G D
Sbjct: 607 KRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLV 666
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI 301
+Y S++ Y R G +GE +L+ + Y +++G+ G + A R +
Sbjct: 667 TYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEM 726
Query: 302 QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQL 361
+GI P + Y G + M + P++ +++ K +
Sbjct: 727 TISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKY 786
Query: 362 NRALEFLIDL 371
A++F+ ++
Sbjct: 787 KEAMDFVSNI 796
>gi|449433055|ref|XP_004134313.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18950-like [Cucumis sativus]
Length = 602
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 97/223 (43%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
AL + + ++ YT +IHG+ K Q+++A M +GF+ ++ + ++ + K G
Sbjct: 322 ALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIG 381
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
NL A + ++++ G S ++++ G D REM + + Y
Sbjct: 382 NLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIVCDVITYN 441
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L++G+ G + + + +Q G+ P A LI G Q+A + +M
Sbjct: 442 TLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWNDMHNR 501
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEA 382
GL+P I+S ++ + +E+LI + + KE
Sbjct: 502 GLQPMVCTRDHIISGLCEQGYVVEGMEWLITMLKSNLKPQKET 544
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 88/207 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I Y +II+G+ K A A+K RG+ D V T ++ + K G L+ A + +
Sbjct: 296 DIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLW 355
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E+ G ++ SY +++ + + G LD L ++M + L+ G ++
Sbjct: 356 FEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLH 415
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G ++ A F + I D LI + G+ ++ + ++ GL+PS
Sbjct: 416 GRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSY 475
Query: 349 ALILSACEKENQLNRALEFLIDLERDG 375
A ++ + + A E D+ G
Sbjct: 476 AHLIQKLCQLGSVQEAKEMWNDMHNRG 502
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 31/177 (17%), Positives = 70/177 (39%), Gaps = 3/177 (1%)
Query: 238 LDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRV 297
+D + G ++ A+ + R +LR+ + ++ + L+ G+ N +
Sbjct: 225 VDIETVGYLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLEL 284
Query: 298 FEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEK 357
+ PD +IN + + +A+ F ++ G P ++ K
Sbjct: 285 VHTMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCK 344
Query: 358 ENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR---EYGLRET 411
QL A + ++ GF+ + + TL F ++G ++E + + + G +ET
Sbjct: 345 MGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKET 401
>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 108/241 (44%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E EAN+ Y +I G ++ ++ AE + MK+ + +T ++ + GNL
Sbjct: 295 ERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLD 354
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A +++K G +Y ++ Y +AG L REM+ + + L+
Sbjct: 355 KASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLI 414
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
Y E A +++ +++ G+ PD + +LI+ M G +++ F++M + +E
Sbjct: 415 DAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVE 474
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
PSD ++ KE+ RAL L ++E G + + ++ + G EE E +
Sbjct: 475 PSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVL 534
Query: 403 L 403
L
Sbjct: 535 L 535
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 88/192 (45%), Gaps = 1/192 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +++ Y + +I A + M+ RG + VT ++ + + AE+
Sbjct: 266 NLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLV 325
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+++K + +Y +++ + G LD+ LL ++ + + Y L+ GYS
Sbjct: 326 DQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKA 385
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
GN +G + ++ GI+P C +LI+AY + +KA+ + +M K GL P
Sbjct: 386 GNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVY 445
Query: 349 A-LILSACEKEN 359
LI C K N
Sbjct: 446 GVLIHGLCMKGN 457
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 104/259 (40%), Gaps = 4/259 (1%)
Query: 159 LALLEE-SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSK 217
L LL++ N+ YT +I G K I+ A M G + +Q T TV++ K
Sbjct: 185 LGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFK 244
Query: 218 AGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
G K + FE++K+ G + +Y ++ Y G + R L EM + V
Sbjct: 245 KGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVT 304
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y L+ G A+++ + ++ A ++P+ LI + G KA + ++
Sbjct: 305 YNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLK 364
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
GL PS +++ K + ++E G K L + RL +
Sbjct: 365 SNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRL---Q 421
Query: 398 EVEHVLREYGLRETYSKIP 416
E+E + Y E + +P
Sbjct: 422 EMEKAFQIYSSMEKFGLVP 440
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 75/182 (41%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I GY K + + M+ RG +VT TV++ Y + ++ A + + ++
Sbjct: 375 YNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSME 434
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D YG ++ G + L R M V +Y ++ GY NS
Sbjct: 435 KFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSY 494
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A R+ ++ G+ P+ + +I G+ ++A M + L+PS + +I
Sbjct: 495 RALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASILNMIS 554
Query: 353 SA 354
A
Sbjct: 555 KA 556
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 58/138 (42%)
Query: 238 LDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRV 297
D S+G M+ G LD+ LL + + +Y L+ G NG+ E A+
Sbjct: 160 FDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLF 219
Query: 298 FEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEK 357
F+ + G+ + +LIN G + + F+ M+ GL P+ +++
Sbjct: 220 FDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCG 279
Query: 358 ENQLNRALEFLIDLERDG 375
E ++ RA + ++ G
Sbjct: 280 EGKICRAFDLFDEMRERG 297
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/141 (19%), Positives = 61/141 (43%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D + +M+ + GNL + + ++ +G + Y +++ + G ++R +
Sbjct: 161 DVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFF 220
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
+M + + L+ G G + +FE ++ G+ P+ L+N Y
Sbjct: 221 DKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGE 280
Query: 324 GQSQKAYTAFQNMRKAGLEPS 344
G+ +A+ F MR+ G+E +
Sbjct: 281 GKICRAFDLFDEMRERGVEAN 301
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 89/191 (46%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
+ VT ++ Y KA ++ A E F+++ G P + + ++V + G ++
Sbjct: 415 NTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFF 474
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
EM + + + Y AL+R + N E A +F+ + AG +PDA + LI+ A
Sbjct: 475 NEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQA 534
Query: 324 GQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEAS 383
G+ +A M++AG P ++++ ++N+L+ A E L ++E G
Sbjct: 535 GKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTY 594
Query: 384 CTLAAWFKRLG 394
TL + F + G
Sbjct: 595 NTLISHFSKTG 605
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 91/197 (46%), Gaps = 1/197 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G + ++ A L MK GF D V+ V++ + + L A E +E++
Sbjct: 524 YYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEME 583
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +++ + + G L+++M + + Y AL+ Y +NGN +
Sbjct: 584 NAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLD 643
Query: 293 GAQRVFEAIQFAG-ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALI 351
A ++F + + P+ + +LIN+ Q A + +M+ G++P+ +
Sbjct: 644 EAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAM 703
Query: 352 LSACEKENQLNRALEFL 368
+++N L++A E +
Sbjct: 704 FKGLQEKNWLSKAFELM 720
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 105/253 (41%), Gaps = 3/253 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y +I GY K I+ A M + G + VTL +V K G + A E F
Sbjct: 415 NTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFF 474
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++ G + +Y +++ A+ +++ L EM + VY L+ G S
Sbjct: 475 NEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQA 534
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A V ++ AG +PD +LIN + + +AY + M AG++P
Sbjct: 535 GKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTY 594
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGL 408
++S K + A + + ++G + L + G ++E + R+
Sbjct: 595 NTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMS- 653
Query: 409 RETYSKIPGSRSI 421
+ SK+P + I
Sbjct: 654 --STSKVPPNTVI 664
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 101/226 (44%), Gaps = 1/226 (0%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
AN++ Y +I+G+ K ++ A N M + I D VT ++ K+G + A +
Sbjct: 334 ANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKL 393
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
+E+ G P DK +Y S++ A + +D+ LL +M + + Y L+ G
Sbjct: 394 VDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCK 453
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G + AQ +FE + G ++I + KA M G P+ K
Sbjct: 454 GGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKT 513
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVG-KEASCTLAAWFKR 392
+I+ + ++++ + A + L ++ G + G K+A C +F+R
Sbjct: 514 YEIIILSLFEKDENDMAEKLLREMIARGLLFGWKKAYCLFTRFFQR 559
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/218 (19%), Positives = 92/218 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ E ++ ++ ++ G+ K+ +++ A+N L M ++G D VT ++ Y
Sbjct: 257 MISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQ 316
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A+ F + G + +SY M+ + + +D L +EM + + Y +
Sbjct: 317 VNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNS 376
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G +G A ++ + + G+ D +++A Q KA M+ G
Sbjct: 377 LIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEG 436
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMV 378
++P +++ K +L A DL G+ +
Sbjct: 437 IQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNI 474
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/246 (19%), Positives = 103/246 (41%), Gaps = 2/246 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L++ +E N T +I G K QI A + + GF ++V ++ K G
Sbjct: 117 ILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQ 176
Query: 221 LKMAEETFEEIK-LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
A + + L +P + Y +++ + + +++ L EM ++ + Y
Sbjct: 177 TSAALQLLRRVDGKLVQP-NVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYS 235
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
AL+ G+ + G A +F + I PD ++L++ + G+ ++A M K
Sbjct: 236 ALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQ 295
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEV 399
G++P ++ Q+N+A + + G ++ + F ++ V+E
Sbjct: 296 GIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEA 355
Query: 400 EHVLRE 405
++ +E
Sbjct: 356 MNLFKE 361
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 48/104 (46%)
Query: 301 IQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQ 360
++F GI D +LIN + G + +++ F N+ K G EP+ + ++ + Q
Sbjct: 82 MEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQ 141
Query: 361 LNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
+++AL F + GF + K TL ++G +LR
Sbjct: 142 IHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLR 185
>gi|414888269|tpg|DAA64283.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 616
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 122/310 (39%), Gaps = 15/310 (4%)
Query: 92 ISQFPRK-MTKRCKAFVKQI--ICVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLM 148
I+ + R + + +A + Q+ V+P + +LAA R P + +L M
Sbjct: 181 IAAYARNALHEEARALLDQMKATGVAPTAATYNTVLAACARATDPP-VPFDMLLGLFAEM 239
Query: 149 EHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTL 208
H S ++ Y ++ + +E L M G D V+
Sbjct: 240 RHDA----------SPSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTMLEAGVSPDTVSY 289
Query: 209 TVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
+V ++ AGNL A E F E+ G D +Y ++ A+ R G +LR+M A
Sbjct: 290 RHIVDAFASAGNLSRAAELFSEMAATGHTADASAYLGLMEAHTRVGATADAVAVLRQMQA 349
Query: 269 QEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
+ Y+ LL Y G +G +++F ++ A + PD +L + G ++
Sbjct: 350 DGCAPTAATYRVLLDLYGRQGRFDGVRQLFREMRTA-VPPDTATYNVLFRVFGDGGFFKE 408
Query: 329 AYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAA 388
F +M K G++P +++AC A E L + R+G + +A L
Sbjct: 409 VVELFHDMLKTGVQPDMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTADAYTGLVE 468
Query: 389 WFKRLGVVEE 398
+ EE
Sbjct: 469 ALGHAAMYEE 478
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 67/167 (40%), Gaps = 1/167 (0%)
Query: 188 NAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMV 247
+A L M R G + T +V A + A F + +G +Y ++
Sbjct: 443 DAREVLEYMTREGMVPTADAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETYNALA 502
Query: 248 MAYVRAGMLDRGEVLLREMDAQE-VYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGI 306
AY R G+ E + M + + + AL+ Y + A + + ++ +
Sbjct: 503 FAYARGGLFQEAEAIFSRMSNNAGIQKSKDSFDALIEAYCQGSRLDDAVKAYMEMRKSRF 562
Query: 307 TPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILS 353
PD R ++NAY +AG ++ F+ ++ + PS ++LS
Sbjct: 563 NPDERSLEGVLNAYCIAGVIDESKEQFEELQSSVTMPSVIAYCMMLS 609
Score = 38.1 bits (87), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 74/198 (37%), Gaps = 1/198 (0%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M + G D VT ++ G A E E + G +Y +V A A M
Sbjct: 416 MLKTGVQPDMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTADAYTGLVEALGHAAM 475
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI-QFAGITPDARMCA 314
+ V M E Y AL Y+ G + A+ +F + AGI
Sbjct: 476 YEEAYVAFNMMTEIGSLPTLETYNALAFAYARGGLFQEAEAIFSRMSNNAGIQKSKDSFD 535
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
LI AY + A A+ MRK+ P ++ + +L+A ++ + E +L+
Sbjct: 536 ALIEAYCQGSRLDDAVKAYMEMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEELQSS 595
Query: 375 GFMVGKEASCTLAAWFKR 392
M A C + + + R
Sbjct: 596 VTMPSVIAYCMMLSLYAR 613
>gi|302819015|ref|XP_002991179.1| hypothetical protein SELMODRAFT_448320 [Selaginella moellendorffii]
gi|300141007|gb|EFJ07723.1| hypothetical protein SELMODRAFT_448320 [Selaginella moellendorffii]
Length = 561
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 116/257 (45%), Gaps = 12/257 (4%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
++ ++AEL + ANI YT I GYG++ AE + G T M
Sbjct: 176 IFQRMAELGV-----AANIEMYTLQIEGYGRRRSFDKAEAVFQRLLTTGPSPTAQTYQTM 230
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPL---DKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
+ YS+AG L + F+ + P D R Y M+ Y + G +++ + + M
Sbjct: 231 MKSYSEAGRLDDVQRIFKLVTDSPSPTVKPDARMYNLMIHTYGKQGKVEQAMSVYQSMKR 290
Query: 269 QEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
+ V + + +LL + + A+ VF +Q A + PD L+NAY A +++
Sbjct: 291 ERVALTIVTFNSLL---ACQKTWKDAEDVFRKLQAAKLDPDVFSYTALVNAYAKARRAEC 347
Query: 329 AYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAA 388
A+ AF +M AG+ P+ +++A K A L ++++G E+ +L +
Sbjct: 348 AHAAFDDMIAAGIRPTQVAYNALINAYAKCKDPEGARAVLKQMKQNGCTPTVESYTSLIS 407
Query: 389 WFKRLGVVEEVEH-VLR 404
+ + ++ + E VLR
Sbjct: 408 AYVSVNLMAKAEQTVLR 424
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 95/200 (47%), Gaps = 7/200 (3%)
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVV--MYSKAGNLK 222
+ + + R Y +IH YGK+ +++ A + +MKR ++V LT++ + + K
Sbjct: 257 TVKPDARMYNLMIHTYGKQGKVEQAMSVYQSMKR-----ERVALTIVTFNSLLACQKTWK 311
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
AE+ F +++ D SY ++V AY +A + +M A + Y AL+
Sbjct: 312 DAEDVFRKLQAAKLDPDVFSYTALVNAYAKARRAECAHAAFDDMIAAGIRPTQVAYNALI 371
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
Y+ + EGA+ V + ++ G TP LI+AY KA M++A L+
Sbjct: 372 NAYAKCKDPEGARAVLKQMKQNGCTPTVESYTSLISAYVSVNLMAKAEQTVLRMKEADLQ 431
Query: 343 PSDKCVALILSACEKENQLN 362
P+ + ++++ N+L+
Sbjct: 432 PNLQTFCILMTGYANGNKLD 451
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 88/204 (43%), Gaps = 2/204 (0%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
+ ++ YT +++ Y K + + A M G QV ++ Y+K + + A
Sbjct: 325 LDPDVFSYTALVNAYAKARRAECAHAAFDDMIAAGIRPTQVAYNALINAYAKCKDPEGAR 384
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+++K G SY S++ AYV ++ + E + M ++ + + L+ GY
Sbjct: 385 AVLKQMKQNGCTPTVESYTSLISAYVSVNLMAKAEQTVLRMKEADLQPNLQTFCILMTGY 444
Query: 286 SMNGNS-EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
+ NGN + R FE ++ AG+ P+ + +L+NAY A ++ M G +P
Sbjct: 445 A-NGNKLDNMMRSFETMKLAGLEPNRHVYTVLVNAYGSNDDFDSAIIWYKQMLGTGCKPD 503
Query: 345 DKCVALILSACEKENQLNRALEFL 368
++L + Q E L
Sbjct: 504 PILRTVLLKIAKSHEQTEEIHELL 527
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 68/138 (49%), Gaps = 3/138 (2%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
+Q ++++ Y K G + E F+ + LG + Y + Y R D+ E +
Sbjct: 153 NQKDYFLVLLAYCKDGQVDKTEGIFQRMAELGVAANIEMYTLQIEGYGRRRSFDKAEAVF 212
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFA---GITPDARMCALLINAY 320
+ + ++ Y+ +++ YS G + QR+F+ + + + PDARM L+I+ Y
Sbjct: 213 QRLLTTGPSPTAQTYQTMMKSYSEAGRLDDVQRIFKLVTDSPSPTVKPDARMYNLMIHTY 272
Query: 321 QMAGQSQKAYTAFQNMRK 338
G+ ++A + +Q+M++
Sbjct: 273 GKQGKVEQAMSVYQSMKR 290
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/140 (19%), Positives = 67/140 (47%), Gaps = 3/140 (2%)
Query: 238 LDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRV 297
+++ Y +++AY + G +D+ E + + M V E+Y + GY + + A+ V
Sbjct: 152 FNQKDYFLVLLAYCKDGQVDKTEGIFQRMAELGVAANIEMYTLQIEGYGRRRSFDKAEAV 211
Query: 298 FEAIQFAGITPDARMCALLINAYQMAGQ---SQKAYTAFQNMRKAGLEPSDKCVALILSA 354
F+ + G +P A+ ++ +Y AG+ Q+ + + ++P + L++
Sbjct: 212 FQRLLTTGPSPTAQTYQTMMKSYSEAGRLDDVQRIFKLVTDSPSPTVKPDARMYNLMIHT 271
Query: 355 CEKENQLNRALEFLIDLERD 374
K+ ++ +A+ ++R+
Sbjct: 272 YGKQGKVEQAMSVYQSMKRE 291
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 101/226 (44%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ + +IHG+ K+ ++ A N + M ++G D VT +V KA + AE
Sbjct: 263 DVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVL 322
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ G D +Y +++ Y +G + R+M ++ + G + + + +
Sbjct: 323 RQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKH 382
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G S+ A+ +F+ + G PD ++L++ Y G+ F +M G+ + C
Sbjct: 383 GRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCF 442
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
+++SA K ++ A+ +++ G TL + F R+G
Sbjct: 443 NILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMG 488
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 78/191 (40%), Gaps = 3/191 (1%)
Query: 157 AELAL---LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVV 213
AEL L +++ E + YT IIHGY + + M +G I VT +
Sbjct: 318 AELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMS 377
Query: 214 MYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYV 273
K G K AEE F+ + G D SY ++ Y G L M + +
Sbjct: 378 SLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVA 437
Query: 274 GSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAF 333
+ L+ ++ G + A VF +Q G+ PD + LI+A+ G+ A F
Sbjct: 438 NCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKF 497
Query: 334 QNMRKAGLEPS 344
M GLEP+
Sbjct: 498 SQMISIGLEPN 508
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 97/226 (42%), Gaps = 2/226 (0%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
A++ E ++ Y ++ GY K +I + M + VT ++++ AG
Sbjct: 605 AMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAG 664
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
A++ F E+ G +D +Y ++ R + D L ++ A + +
Sbjct: 665 RTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILN 724
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
++ E A +F AI +G+ P+ ++I+ G ++A T F +M K+
Sbjct: 725 TVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKS 784
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCT 385
G PS + + I+ ++ + +A ++ + DG ++ EAS T
Sbjct: 785 GCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKV--DGTIISLEASTT 828
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/233 (19%), Positives = 93/233 (39%), Gaps = 36/233 (15%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y+ ++HGY + + + N +M +G + + +++ ++K G + A F
Sbjct: 403 DLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVF 462
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++ G D +Y +++ A+ R G L +M + + + VY +L+ G+ M+
Sbjct: 463 TEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMH 522
Query: 289 GN--------------------------------SEG----AQRVFEAIQFAGITPDARM 312
G+ +EG A VF + G P
Sbjct: 523 GDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVT 582
Query: 313 CALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
LI+ Y + G+ +KA+ M G+EP ++S K +++ L
Sbjct: 583 FNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGL 635
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 103/232 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+GY K + NA L MK G D+ T +V +SK G L+ A F+E+
Sbjct: 488 YNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMV 547
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + SY +++ + + G +D LL M+ E Y A++ G S
Sbjct: 548 ECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFS 607
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+++ + + G+ P+ LI+ G++Q A+ F +M K P+ + ++
Sbjct: 608 EAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLI 667
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
+E + + A L ++ER G + +L F LG ++ +LR
Sbjct: 668 YGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLR 719
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 118/277 (42%), Gaps = 33/277 (11%)
Query: 159 LALLEESFE----ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
L+LLE E N+ Y +I+G K+ + AE M +G + + +T T ++
Sbjct: 575 LSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDG 634
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
+ G + A + F +++ + +Y S++ + G D E+LL+EM+ + +
Sbjct: 635 LCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPD 694
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQ---------MAGQ 325
+ +L+ G+ + G + A + + G P+ R ++L+ Q +A Q
Sbjct: 695 EVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQ 754
Query: 326 SQKAYT---------------AFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLID 370
+ Y+ M + G EP+ + ++S ++ + A + + D
Sbjct: 755 HEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKD 814
Query: 371 LERDGFMVGKEASCT-LAAWFKRLGVVEEVEHVLREY 406
++ GF +E + L A K L EV+H L+ +
Sbjct: 815 MKERGFCPDREIYYSLLIAHCKNL----EVDHALKIF 847
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 81/204 (39%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E+ E + YT I + A + MK+RG + T T ++ S+ G
Sbjct: 336 MIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGK 395
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L++A + ++ G + +Y +++ G + M+ ++ Y
Sbjct: 396 LEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNE 455
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+++G + G+ E A +FE + G P LIN Y G A M++ G
Sbjct: 456 IIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENG 515
Query: 341 LEPSDKCVALILSACEKENQLNRA 364
EP + ++S K +L A
Sbjct: 516 CEPDEWTYNELVSGFSKWGKLESA 539
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 65/153 (42%)
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI 301
+Y ++V R G E L+++M + E+Y +LL + N + A ++F +I
Sbjct: 791 TYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSI 850
Query: 302 QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQL 361
+ G + LI A AGQ ++A F NM + + +++ KE +L
Sbjct: 851 EAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGEL 910
Query: 362 NRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
+ ++ L +E F + L R+G
Sbjct: 911 DLCMKLLHIMESKNFTPNIQTYVILGRELSRIG 943
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 68/160 (42%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E + Y+ ++ G +K + AE + MK RGF D+ +++ + K + A +
Sbjct: 786 EPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALK 845
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
F I+ G L Y +++ A +AG ++ + L M +E V+ L+ G
Sbjct: 846 IFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLL 905
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
G + ++ ++ TP+ + +L G+S
Sbjct: 906 KEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKS 945
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 46/245 (18%), Positives = 100/245 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++E + N Y+ +I+G + ++ A + L M +G T T+ + +
Sbjct: 301 MVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEH 360
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A E +K G + ++Y +++ R G L+ L +M + + + Y A
Sbjct: 361 EEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNA 420
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ + G A ++F ++ G + + +I + G +KA F+ M K G
Sbjct: 421 LINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMG 480
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
P+ +++ + +N A L ++ +G + L + F + G +E
Sbjct: 481 PLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESAS 540
Query: 401 HVLRE 405
+E
Sbjct: 541 FYFQE 545
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 70/156 (44%)
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI 301
++ +++ + G + E++L ++ ++ Y +L+ G+ N N + A VF+ +
Sbjct: 242 TFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRM 301
Query: 302 QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQL 361
G P++ + LIN G+ +A + M + G+EP+ L ++A
Sbjct: 302 VKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHE 361
Query: 362 NRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
A+E + +++ G + L + RLG +E
Sbjct: 362 EEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLE 397
>gi|414888268|tpg|DAA64282.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 868
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 96/234 (41%), Gaps = 1/234 (0%)
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA 224
S ++ Y ++ + +E L M G D V+ +V ++ AGNL A
Sbjct: 246 SVRPDLTTYNTLLAAAAVRSLADQSEMLLHTMLEAGVSPDTVSYRHIVDAFASAGNLSRA 305
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
E F E+ G D +Y ++ A+ R G +LR+M A + Y+ LL
Sbjct: 306 AELFSEMAATGHTADASAYLGLMEAHTRVGATADAVAVLRQMQADGCAPTAATYRVLLDL 365
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
Y G +G +++F ++ A + PD +L + G ++ F +M K G++P
Sbjct: 366 YGRQGRFDGVRQLFREMRTA-VPPDTATYNVLFRVFGDGGFFKEVVELFHDMLKTGVQPD 424
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
+++AC A E L + R+G + +A L + EE
Sbjct: 425 MVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTADAYTGLVEALGHAAMYEE 478
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/188 (19%), Positives = 77/188 (40%), Gaps = 1/188 (0%)
Query: 188 NAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMV 247
+A L M R G + T +V A + A F + +G +Y ++
Sbjct: 443 DAREVLEYMTREGMVPTADAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETYNALA 502
Query: 248 MAYVRAGMLDRGEVLLREMDAQE-VYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGI 306
AY R G+ E + M + + + AL+ Y + A + + ++ +
Sbjct: 503 FAYARGGLFQEAEAIFSRMSNNAGIQKSKDSFDALIEAYCQGSRLDDAVKAYMEMRKSRF 562
Query: 307 TPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALE 366
PD R ++NAY +AG ++ F+ ++ + PS ++LS + ++ A +
Sbjct: 563 NPDERSLEGVLNAYCIAGVIDESKEQFEELQSSVTMPSVIAYCMMLSLYARNDRWTDAYD 622
Query: 367 FLIDLERD 374
L +++ +
Sbjct: 623 LLEEMKTN 630
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 74/198 (37%), Gaps = 1/198 (0%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M + G D VT ++ G A E E + G +Y +V A A M
Sbjct: 416 MLKTGVQPDMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTADAYTGLVEALGHAAM 475
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI-QFAGITPDARMCA 314
+ V M E Y AL Y+ G + A+ +F + AGI
Sbjct: 476 YEEAYVAFNMMTEIGSLPTLETYNALAFAYARGGLFQEAEAIFSRMSNNAGIQKSKDSFD 535
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
LI AY + A A+ MRK+ P ++ + +L+A ++ + E +L+
Sbjct: 536 ALIEAYCQGSRLDDAVKAYMEMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEELQSS 595
Query: 375 GFMVGKEASCTLAAWFKR 392
M A C + + + R
Sbjct: 596 VTMPSVIAYCMMLSLYAR 613
>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
Length = 951
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 112/243 (46%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E+S N+ ++ II+G K+ + A + + MK G + VT ++ + K +
Sbjct: 425 EKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQE 484
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A + + ++ G + S+V + G ++ E L ++MD + + + Y L+
Sbjct: 485 AALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLM 544
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G GN A +V + + ++PDA + + IN G+ +A + + MR GLE
Sbjct: 545 DGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLE 604
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P +++A +E + ++AL+ L +++R+ TL GVV++ + +
Sbjct: 605 PDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFL 664
Query: 403 LRE 405
L E
Sbjct: 665 LNE 667
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/304 (20%), Positives = 133/304 (43%), Gaps = 20/304 (6%)
Query: 104 KAFVKQI--ICVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELAL 161
K+F+K++ + P+ + ++AA R K +A L +LK++K
Sbjct: 592 KSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKA--LKLLKEMK--------------- 634
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL 221
S + N+ YT ++ G + ++ A+ L M GF +T ++ S +
Sbjct: 635 -RNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRP 693
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
+ E E + G D Y ++V GM V+L EM + + + + AL
Sbjct: 694 DVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNAL 753
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+ G+ + + + A ++ + G++P+ L+ + AG+ +A T +M+K GL
Sbjct: 754 ILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGL 813
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEH 401
EP++ ++++ K++ AL ++ GF+ +L + F + G++ + +
Sbjct: 814 EPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKE 873
Query: 402 VLRE 405
+ E
Sbjct: 874 LFSE 877
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 106/251 (42%), Gaps = 1/251 (0%)
Query: 154 LQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVV 213
L++ EL ++ A+I Y ++H +NA L M RG D +T +++
Sbjct: 697 LEIHEL-MMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALIL 755
Query: 214 MYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYV 273
+ K+ +L A + ++ G + ++ +++ AG + + +L +M +
Sbjct: 756 GHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEP 815
Query: 274 GSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAF 333
+ Y L+ GY+ N A R++ + G P A L++ + AG +A F
Sbjct: 816 NNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELF 875
Query: 334 QNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRL 393
M++ G+ + ++L+ K L D++ GF K +++ F R
Sbjct: 876 SEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRP 935
Query: 394 GVVEEVEHVLR 404
G+ E +L+
Sbjct: 936 GMTGEARRLLK 946
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 84/202 (41%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D V ++ Y K ++ A E + G LD Y S+V + +G D ++
Sbjct: 186 DVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVV 245
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
M A V Y AL+ Y + A ++E + +G+ PD + L++
Sbjct: 246 ERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRD 305
Query: 324 GQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEAS 383
GQ +AY F+ M K G+ P+ ++ + K + + +L L ++ G ++
Sbjct: 306 GQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMY 365
Query: 384 CTLAAWFKRLGVVEEVEHVLRE 405
L + G +EE + VLR
Sbjct: 366 TALMDRLGKEGKIEEAKDVLRH 387
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 92/213 (43%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ E N+ YT +I Y K + A + M R G + D VTL+ +V + G
Sbjct: 251 DGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSE 310
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F E+ +G + +Y +++ + +A LL EM ++ V + +Y AL+
Sbjct: 311 AYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMD 370
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G E A+ V Q ITP+ +L++A+ AG A M + + P
Sbjct: 371 RLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIP 430
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+ + I++ K L +A +++ ++ G
Sbjct: 431 NVVTFSSIINGLVKRGCLGKAADYMRKMKDSGI 463
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 77/207 (37%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L E EAN +++G K I+ AE M RG + D V T ++ K GN
Sbjct: 493 MLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGN 552
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + +E+ D Y + G + L+EM + Y
Sbjct: 553 MPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNT 612
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G + A ++ + ++ I P+ L+ AG +KA M AG
Sbjct: 613 MIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAG 672
Query: 341 LEPSDKCVALILSACEKENQLNRALEF 367
P+ +L AC + + LE
Sbjct: 673 FAPTSLTHQRVLQACSGSRRPDVILEI 699
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 78/178 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + NI + ++ G +I A+ L MK+ G + +T ++V Y+K N
Sbjct: 773 MLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSN 832
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A + E+ G +Y S++ + +AGM+++ + L EM + V S Y
Sbjct: 833 KVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDI 892
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
LL G+S N + + + ++ G P + + A+ G + +A + + K
Sbjct: 893 LLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRPGMTGEARRLLKTLFK 950
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 97/232 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y+ +I+G+ + Q+ N L M RG D VT T ++ KA AE F
Sbjct: 198 NVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVF 257
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+++ G + +Y ++ Y+ G +L EM A+ + Y +LL N
Sbjct: 258 QQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKN 317
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G A+ F+++ GI P +LI+ Y G + ++ M + GL P
Sbjct: 318 GRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIF 377
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+ SA K +++A++ + + G L +LG V++ E
Sbjct: 378 NIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAE 429
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 71/186 (38%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
L +++ ++ YT +I G K AE M GF + T ++ Y
Sbjct: 223 LEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSI 282
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
G K + EE+ G D +YGS++ + G M + + Y
Sbjct: 283 GKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTY 342
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
L+ GY+ G + + G++PD + + +AY G KA F MR+
Sbjct: 343 GILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQ 402
Query: 339 AGLEPS 344
GL P+
Sbjct: 403 HGLSPN 408
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 99/255 (38%), Gaps = 35/255 (13%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+++ + + + Y +IHGY K + + L M G D + Y+K G
Sbjct: 329 SMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCG 388
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ A + F +++ G + +YG+++ A + G +D EV +M + V V+
Sbjct: 389 MIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFN 448
Query: 280 ALLRG--------------YSM---------------------NGNSEGAQRVFEAIQFA 304
+L+ G Y M G +R+ + ++
Sbjct: 449 SLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHV 508
Query: 305 GITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
G+ PDA LI+ Y + G++ +A F M GL P++ +L ++++ A
Sbjct: 509 GVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDA 568
Query: 365 LEFLIDLERDGFMVG 379
++ R G G
Sbjct: 569 YCLFREMLRKGVTPG 583
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 86/213 (40%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+ N+ +Y +I K ++ +AE M G + V +V +
Sbjct: 402 QHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWE 461
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
AEE E+ G + + +++ G + G L+ M+ V + Y L+
Sbjct: 462 RAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLI 521
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
GY + G ++ A++VF+ + G++P L++ Y A + AY F+ M + G+
Sbjct: 522 SGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVT 581
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDG 375
P IL + + + A E +++ G
Sbjct: 582 PGVVTYNTILHGLFQTKRFSEAKELYLNMINSG 614
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 70/184 (38%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ F+ N Y +IHGY + + L M RG D T ++ K G
Sbjct: 260 MIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGR 319
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A F+ + G +YG ++ Y G L L M + ++
Sbjct: 320 CREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNI 379
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
Y+ G + A +F ++ G++P+ LI+A G+ A F M G
Sbjct: 380 FFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEG 439
Query: 341 LEPS 344
+ P+
Sbjct: 440 VTPN 443
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/182 (19%), Positives = 76/182 (41%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M+ G D + T ++ Y G AE+ F+ + +G + +Y +++ Y A
Sbjct: 505 MEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASR 564
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
+D L REM + V G Y +L G A+ ++ + +G D +
Sbjct: 565 IDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNI 624
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
++N + +A+ FQ++ GL+ + +++ A K + A++ + +G
Sbjct: 625 ILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANG 684
Query: 376 FM 377
+
Sbjct: 685 LV 686
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 48/251 (19%), Positives = 98/251 (39%), Gaps = 6/251 (2%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++HGY +I +A M R+G VT ++ + A+E + +
Sbjct: 552 YNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMI 611
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y ++ ++ +D + + + ++ + + + ++ G E
Sbjct: 612 NSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKE 671
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +F AI G+ P+ L+ G ++ + F M K G P+ + + ++
Sbjct: 672 DAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALV 731
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRETY 412
++RA +L L+ F V + L + F +E +H + L E Y
Sbjct: 732 RRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLMSIFTS----DEYQHHAKS--LPEKY 785
Query: 413 SKIPGSRSIAL 423
+ + S AL
Sbjct: 786 HFLNEANSSAL 796
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 40/216 (18%), Positives = 80/216 (37%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ E NI + +++G + + AE + M +G + V ++ G
Sbjct: 435 MINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGR 494
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ + ++ +G D SY ++ Y G D E + M + + Y
Sbjct: 495 VMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNT 554
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL GY + A +F + G+TP +++ + +A + NM +G
Sbjct: 555 LLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSG 614
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+ +IL+ K N ++ A + L G
Sbjct: 615 TKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGL 650
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 35/193 (18%), Positives = 75/193 (38%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + + Y I+HG + + A+ L M G CD T +++ K+
Sbjct: 575 MLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNC 634
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + F+ + G L+ ++ M+ A ++ G + L + A + Y+
Sbjct: 635 VDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRL 694
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+ G+ E +F A++ G P+++M L+ G +A + +
Sbjct: 695 VAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERN 754
Query: 341 LEPSDKCVALILS 353
+L++S
Sbjct: 755 FSVEASTTSLLMS 767
>gi|414888270|tpg|DAA64284.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 890
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 96/234 (41%), Gaps = 1/234 (0%)
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA 224
S ++ Y ++ + +E L M G D V+ +V ++ AGNL A
Sbjct: 268 SVRPDLTTYNTLLAAAAVRSLADQSEMLLHTMLEAGVSPDTVSYRHIVDAFASAGNLSRA 327
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
E F E+ G D +Y ++ A+ R G +LR+M A + Y+ LL
Sbjct: 328 AELFSEMAATGHTADASAYLGLMEAHTRVGATADAVAVLRQMQADGCAPTAATYRVLLDL 387
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
Y G +G +++F ++ A + PD +L + G ++ F +M K G++P
Sbjct: 388 YGRQGRFDGVRQLFREMRTA-VPPDTATYNVLFRVFGDGGFFKEVVELFHDMLKTGVQPD 446
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
+++AC A E L + R+G + +A L + EE
Sbjct: 447 MVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTADAYTGLVEALGHAAMYEE 500
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/188 (19%), Positives = 77/188 (40%), Gaps = 1/188 (0%)
Query: 188 NAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMV 247
+A L M R G + T +V A + A F + +G +Y ++
Sbjct: 465 DAREVLEYMTREGMVPTADAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETYNALA 524
Query: 248 MAYVRAGMLDRGEVLLREMDAQE-VYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGI 306
AY R G+ E + M + + + AL+ Y + A + + ++ +
Sbjct: 525 FAYARGGLFQEAEAIFSRMSNNAGIQKSKDSFDALIEAYCQGSRLDDAVKAYMEMRKSRF 584
Query: 307 TPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALE 366
PD R ++NAY +AG ++ F+ ++ + PS ++LS + ++ A +
Sbjct: 585 NPDERSLEGVLNAYCIAGVIDESKEQFEELQSSVTMPSVIAYCMMLSLYARNDRWTDAYD 644
Query: 367 FLIDLERD 374
L +++ +
Sbjct: 645 LLEEMKTN 652
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 74/198 (37%), Gaps = 1/198 (0%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M + G D VT ++ G A E E + G +Y +V A A M
Sbjct: 438 MLKTGVQPDMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTADAYTGLVEALGHAAM 497
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI-QFAGITPDARMCA 314
+ V M E Y AL Y+ G + A+ +F + AGI
Sbjct: 498 YEEAYVAFNMMTEIGSLPTLETYNALAFAYARGGLFQEAEAIFSRMSNNAGIQKSKDSFD 557
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
LI AY + A A+ MRK+ P ++ + +L+A ++ + E +L+
Sbjct: 558 ALIEAYCQGSRLDDAVKAYMEMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEELQSS 617
Query: 375 GFMVGKEASCTLAAWFKR 392
M A C + + + R
Sbjct: 618 VTMPSVIAYCMMLSLYAR 635
>gi|357458279|ref|XP_003599420.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488468|gb|AES69671.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 511
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 84/165 (50%)
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA 224
S + +I+ + +I YGK ++ + M+RR F VT ++ +Y KAG ++
Sbjct: 304 SIKPDIKTFNMMIKSYGKAGMYDKMKSVMDFMERRFFAPTIVTYNTVIEVYGKAGEIEKM 363
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
++ F+ +K +G + +Y S+V AY +AG++ + + +LR ++ +V + + + ++
Sbjct: 364 DKHFKNMKHIGMKPNSVTYCSLVNAYSKAGLIRKIDSILRHVENSDVILDTPFFNCIISA 423
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
Y G+ + +F A++ PD +I AY G ++ A
Sbjct: 424 YGQVGDLKKMGELFLAMRARKCEPDRTTFTCMIQAYNTQGITEAA 468
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 115/264 (43%), Gaps = 19/264 (7%)
Query: 107 VKQIICVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESF 166
+K ++ P+ S L++ +F RR D L+E L A+++
Sbjct: 193 MKSVVDCKPDVYTYSVLISCCAKF---RRFD---------LIERVL----ADMSY--SGI 234
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAM-KRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
E N Y II GYGK + EN+L M + D TL ++ Y G + E
Sbjct: 235 ECNSVTYNSIIDGYGKAGMFEQMENSLTDMIENENCQPDVFTLNSLIGSYGNGGKIDKME 294
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+ ++E +L+ D +++ M+ +Y +AGM D+ + ++ M+ + Y ++ Y
Sbjct: 295 KWYDEFQLMSIKPDIKTFNMMIKSYGKAGMYDKMKSVMDFMERRFFAPTIVTYNTVIEVY 354
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
G E + F+ ++ G+ P++ L+NAY AG +K + +++ + +
Sbjct: 355 GKAGEIEKMDKHFKNMKHIGMKPNSVTYCSLVNAYSKAGLIRKIDSILRHVENSDVILDT 414
Query: 346 KCVALILSACEKENQLNRALEFLI 369
I+SA + L + E +
Sbjct: 415 PFFNCIISAYGQVGDLKKMGELFL 438
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/278 (19%), Positives = 116/278 (41%), Gaps = 6/278 (2%)
Query: 132 KPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAEN 191
+PR + +L L + P +L E + + T ++ YG+ ++A +
Sbjct: 129 EPRCQTYTKLLMMLSKCKQPKEASQLYETMLFEGLKPTVDVLTALVSAYGQSGLFRHAFS 188
Query: 192 TLLAMKRRGFIC--DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMA 249
T+ MK C D T +V++ +K + E ++ G + +Y S++
Sbjct: 189 TIEDMKSV-VDCKPDVYTYSVLISCCAKFRRFDLIERVLADMSYSGIECNSVTYNSIIDG 247
Query: 250 YVRAGMLDRGEVLLREMDAQEVYVGSEVY--KALLRGYSMNGNSEGAQRVFEAIQFAGIT 307
Y +AGM ++ E L +M E +V+ +L+ Y G + ++ ++ Q I
Sbjct: 248 YGKAGMFEQMENSLTDMIENE-NCQPDVFTLNSLIGSYGNGGKIDKMEKWYDEFQLMSIK 306
Query: 308 PDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
PD + ++I +Y AG K + M + P+ ++ K ++ + +
Sbjct: 307 PDIKTFNMMIKSYGKAGMYDKMKSVMDFMERRFFAPTIVTYNTVIEVYGKAGEIEKMDKH 366
Query: 368 LIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+++ G C+L + + G++ +++ +LR
Sbjct: 367 FKNMKHIGMKPNSVTYCSLVNAYSKAGLIRKIDSILRH 404
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 58/132 (43%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F I Y +I YGK +I+ + MK G + VT +V YSKAG ++ +
Sbjct: 340 FAPTIVTYNTVIEVYGKAGEIEKMDKHFKNMKHIGMKPNSVTYCSLVNAYSKAGLIRKID 399
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
++ LD + ++ AY + G L + L M A++ + +++ Y
Sbjct: 400 SILRHVENSDVILDTPFFNCIISAYGQVGDLKKMGELFLAMRARKCEPDRTTFTCMIQAY 459
Query: 286 SMNGNSEGAQRV 297
+ G +E A+ +
Sbjct: 460 NTQGITEAAKNL 471
>gi|302761794|ref|XP_002964319.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
gi|300168048|gb|EFJ34652.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
Length = 384
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 98/226 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +++G +++ AE L MK+ + VT T ++ Y+ AG L+ + F+E+K
Sbjct: 56 YNCLVNGLVNSGRLEAAEKILDDMKQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMK 115
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
GE + +Y +++ Y R G+ L EMD Y + Y G E
Sbjct: 116 DKGESPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLE 175
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
+R+ + + G+ PD L++ Y KA+ + M +AG P+ ++L
Sbjct: 176 DMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIML 235
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
S+ KE + A + +L+ G + + + + R G+ E
Sbjct: 236 SSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTE 281
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 93/209 (44%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y I YGK+ +++ E L M +G DQVT ++ +Y+K A E
Sbjct: 157 DVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEIL 216
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E+ G + +Y M+ + + + L + ++ V Y A+L Y +
Sbjct: 217 REMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRH 276
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G A ++++ + AG P + LI +Y G Q+A FQ+MRK+G+ P K
Sbjct: 277 GLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIY 336
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFM 377
++ A K + A ++ ++GF+
Sbjct: 337 TALMDAYGKAGRCREAELLYFEMTKEGFV 365
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 78/182 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ Y KK A L M G+ + T +M+ K ++ A + FE +K
Sbjct: 196 YNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLK 255
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +Y +M+ Y R G+ L EM Y L+ Y +G +
Sbjct: 256 SKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQ 315
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A F+ ++ +GI PD ++ L++AY AG+ ++A + M K G P +++
Sbjct: 316 EALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFEMTKEGFVPDGITYGILV 375
Query: 353 SA 354
A
Sbjct: 376 RA 377
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 6/111 (5%)
Query: 150 HPLYLQVAELALLEESFEAN----IRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQ 205
H LY + A+L +E EA I Y+ +I YG Q A M++ G + D
Sbjct: 276 HGLYTEAAKL--WDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDT 333
Query: 206 VTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGML 256
T ++ Y KAG + AE + E+ G D +YG +V A+ AG L
Sbjct: 334 KIYTALMDAYGKAGRCREAELLYFEMTKEGFVPDGITYGILVRAFANAGRL 384
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 105/233 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+T ++ K +++ A M++ GF D + M+ +KAG+ + A + + +
Sbjct: 228 HTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNML 287
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ +YG +V + +AG L+R E L R M A S +Y +L+ G++ +G +
Sbjct: 288 AKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMK 347
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +F+ + AG PD ++I+ +G ++A +F+ M + G +P+ I+
Sbjct: 348 EACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTII 407
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
K ++ A + + G L F +LG ++E +L E
Sbjct: 408 QGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDE 460
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 115/283 (40%), Gaps = 38/283 (13%)
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA 224
F N YT +IHG+ K +++ A + M G+ D +T TVM+ K+GN + A
Sbjct: 325 GFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQA 384
Query: 225 EETFEEIKLLG-EP----------------------------------LDKRSYGSMVMA 249
++FEE+ G +P D +Y ++
Sbjct: 385 AKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDG 444
Query: 250 YVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGA-QRVFEAIQFAGITP 308
+ + G LD LL E+D ++Y +L++G G+ E +FE + A
Sbjct: 445 FCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENL 504
Query: 309 DARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSA-C-EKENQLNRALE 366
D +C +I G+ +A FQ M G +P ++++ C +EN++ RA
Sbjct: 505 DPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFA 564
Query: 367 FLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLR 409
L DLE G++ L ++G V+ +L E R
Sbjct: 565 LLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSR 607
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 129/318 (40%), Gaps = 30/318 (9%)
Query: 71 DTSMFTWIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRF 130
D + I +G T +A F R +++ CK P+ + L+ R
Sbjct: 505 DPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCK----------PDATTYNILINGLCRS 554
Query: 131 MKPRRADWLAVLKQLKLMEH--------PLYLQVAELA-------LLEES----FEANIR 171
+ R A+L L+++ + PL + + ++ +LEE+ + A++
Sbjct: 555 RENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVV 614
Query: 172 DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEI 231
YT + G + Q+ A + M R+G D ++ K L+ A + F+E+
Sbjct: 615 AYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEM 674
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE-VYKALLRGYSMNGN 290
G+ +Y ++V A AG +D M A+ VGS +Y AL+ G+
Sbjct: 675 IGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALK 734
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
+ A ++FE + G P A A L + +G+++KA Q M G P
Sbjct: 735 VDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTA 794
Query: 351 ILSACEKENQLNRALEFL 368
IL K ++ + L+ +
Sbjct: 795 ILDGLRKSDESGKLLKLV 812
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 88/210 (41%), Gaps = 1/210 (0%)
Query: 196 MKRRGFIC-DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG 254
M GF+ D+ T MV KA +K A E F +++ G P D +Y +M+ +AG
Sbjct: 215 MMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAG 274
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
+L M A+ Y L+ G E A+ +F + +G P++ +
Sbjct: 275 HAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYT 334
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
LI+ + +G+ ++A + F M +AG P +++ K +A + ++ R
Sbjct: 335 SLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRG 394
Query: 375 GFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
G T+ ++G V +++
Sbjct: 395 GCKPNVVTYTTIIQGLSKIGRVANAFRIMK 424
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 103/249 (41%), Gaps = 5/249 (2%)
Query: 161 LLEESFEANIRDYTKIIHGY--GKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
++ E + + Y +I+G ++ +++ A L ++ G++ D VT T + + K
Sbjct: 532 MVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKI 591
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
G + A + EE G D +Y ++ G +DR L +EM Q + Y
Sbjct: 592 GEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAY 651
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
++ G E A + F+ + G P L+ A AG +A+ F+ M
Sbjct: 652 CCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLA 711
Query: 339 AGLEPSDKCV--ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVV 396
G + ALI C K +++ AL+ D+ G + S +L R G
Sbjct: 712 RGELVGSVMIYDALIHGFC-KALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKT 770
Query: 397 EEVEHVLRE 405
E+ + +L+E
Sbjct: 771 EKAQELLQE 779
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/217 (19%), Positives = 90/217 (41%), Gaps = 1/217 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L+ N + +I + + + +A MKR+ D T ++V KAG
Sbjct: 145 MLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGM 204
Query: 221 LKMAEETFEEIKLLG-EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ A E F E+ +G P D+ + +MV ++A + + +M+ + Y
Sbjct: 205 DEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYN 264
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
++ G + G+++ A +V + + P +L+N+ AG ++A F+ M +
Sbjct: 265 TMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAAS 324
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
G P+ ++ K ++ A ++ G+
Sbjct: 325 GFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGY 361
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 53/127 (41%), Gaps = 1/127 (0%)
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
+ L+R ++ ++ A FE ++ PD +L++ AG +KA+ F M
Sbjct: 157 FNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMM 216
Query: 338 KAGLEPSDKCV-ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVV 396
G P D+ + ++ K ++ A E +E+ GF A T+ + G
Sbjct: 217 AMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHA 276
Query: 397 EEVEHVL 403
+E VL
Sbjct: 277 QEALKVL 283
>gi|414888267|tpg|DAA64281.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 873
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 96/234 (41%), Gaps = 1/234 (0%)
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA 224
S ++ Y ++ + +E L M G D V+ +V ++ AGNL A
Sbjct: 246 SVRPDLTTYNTLLAAAAVRSLADQSEMLLHTMLEAGVSPDTVSYRHIVDAFASAGNLSRA 305
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
E F E+ G D +Y ++ A+ R G +LR+M A + Y+ LL
Sbjct: 306 AELFSEMAATGHTADASAYLGLMEAHTRVGATADAVAVLRQMQADGCAPTAATYRVLLDL 365
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
Y G +G +++F ++ A + PD +L + G ++ F +M K G++P
Sbjct: 366 YGRQGRFDGVRQLFREMRTA-VPPDTATYNVLFRVFGDGGFFKEVVELFHDMLKTGVQPD 424
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
+++AC A E L + R+G + +A L + EE
Sbjct: 425 MVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTADAYTGLVEALGHAAMYEE 478
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/188 (19%), Positives = 77/188 (40%), Gaps = 1/188 (0%)
Query: 188 NAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMV 247
+A L M R G + T +V A + A F + +G +Y ++
Sbjct: 443 DAREVLEYMTREGMVPTADAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETYNALA 502
Query: 248 MAYVRAGMLDRGEVLLREMDAQE-VYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGI 306
AY R G+ E + M + + + AL+ Y + A + + ++ +
Sbjct: 503 FAYARGGLFQEAEAIFSRMSNNAGIQKSKDSFDALIEAYCQGSRLDDAVKAYMEMRKSRF 562
Query: 307 TPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALE 366
PD R ++NAY +AG ++ F+ ++ + PS ++LS + ++ A +
Sbjct: 563 NPDERSLEGVLNAYCIAGVIDESKEQFEELQSSVTMPSVIAYCMMLSLYARNDRWTDAYD 622
Query: 367 FLIDLERD 374
L +++ +
Sbjct: 623 LLEEMKTN 630
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 74/198 (37%), Gaps = 1/198 (0%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M + G D VT ++ G A E E + G +Y +V A A M
Sbjct: 416 MLKTGVQPDMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTADAYTGLVEALGHAAM 475
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI-QFAGITPDARMCA 314
+ V M E Y AL Y+ G + A+ +F + AGI
Sbjct: 476 YEEAYVAFNMMTEIGSLPTLETYNALAFAYARGGLFQEAEAIFSRMSNNAGIQKSKDSFD 535
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
LI AY + A A+ MRK+ P ++ + +L+A ++ + E +L+
Sbjct: 536 ALIEAYCQGSRLDDAVKAYMEMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEELQSS 595
Query: 375 GFMVGKEASCTLAAWFKR 392
M A C + + + R
Sbjct: 596 VTMPSVIAYCMMLSLYAR 613
>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
Length = 871
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 97/226 (42%), Gaps = 3/226 (1%)
Query: 153 YLQVAELAL---LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLT 209
+LQ A + L LE+ F N YT ++ GY K ++ A+ MK RG D V T
Sbjct: 507 WLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFT 566
Query: 210 VMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQ 269
++ SKAGN++ A E F E+ +G + +Y S++ G + L +EM +
Sbjct: 567 ALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQK 626
Query: 270 EVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
+ + + ++ G+ G + A F +Q G+ PD +LI Y A A
Sbjct: 627 GLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGA 686
Query: 330 YTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
M GL+P + + ++N+A+ L L G
Sbjct: 687 GEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAG 732
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 110/253 (43%), Gaps = 2/253 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ E ++ +T I+H ++ + A ++ G + ++ Y KA
Sbjct: 308 MVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKARE 367
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A +EE++ G D ++ +V + + G ++ + LL+++ +++ S +Y
Sbjct: 368 VAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDV 427
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G + A ++ + + G+T LI AY AG KA+ A++ M + G
Sbjct: 428 MVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCG 487
Query: 341 LEPSDK-CVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEV 399
PS C +L++ C K L A L + GF + K A L + ++ +E
Sbjct: 488 FTPSSSTCNSLLMGLCRK-GWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGA 546
Query: 400 EHVLREYGLRETY 412
+ + +E R Y
Sbjct: 547 QFLWKEMKERGIY 559
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 92/217 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
LLE+ ++ + +I Y + A M R GF T +++ + G
Sbjct: 448 LLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGW 507
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ A + G P++K +Y ++ Y + L+ + L +EM + +Y + + A
Sbjct: 508 LQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTA 567
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G S GN E A VF + G P+ LI G+ +A + MR+ G
Sbjct: 568 LIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKG 627
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
L +I+ + Q+ A+E +D++R G +
Sbjct: 628 LLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLL 664
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 69/161 (42%)
Query: 185 QIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYG 244
++ A L + +G V ++ YS+AG A E + + G +
Sbjct: 437 RLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCN 496
Query: 245 SMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFA 304
S++M R G L +LL M + + Y LL GY N EGAQ +++ ++
Sbjct: 497 SLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKER 556
Query: 305 GITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
GI PDA LI+ AG ++AY F M G P++
Sbjct: 557 GIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNN 597
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 94/233 (40%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ GY K ++ A M+ G D VT ++V + K G ++ ++ +++
Sbjct: 355 YNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLI 414
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ G LD Y MV + AG LD LL+E+ + + + + +L+ YS G +
Sbjct: 415 VSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLED 474
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + G TP + C L+ G Q+A M + G + ++L
Sbjct: 475 KAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLL 534
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
K N L A +++ G A L + G VEE V E
Sbjct: 535 DGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLE 587
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 95/213 (44%), Gaps = 10/213 (4%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKL 233
++ G +K +Q A L M +GF ++V TV++ Y K NL+ A+ ++E+K
Sbjct: 496 NSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKE 555
Query: 234 LGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEG 293
G D ++ +++ +AG ++ + EM A + Y +L+RG G
Sbjct: 556 RGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTE 615
Query: 294 AQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILS 353
A ++ + ++ G+ D ++I+ + GQ + A F +M++ GL P +++
Sbjct: 616 ALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIG 675
Query: 354 ACEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
K D+ G +V K SC L
Sbjct: 676 GYCKA----------FDMVGAGEIVNKMYSCGL 698
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 81/179 (45%), Gaps = 6/179 (3%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
LL ++F NI II G+ ++ Q++ A T L M+R G + D T +++ Y KA
Sbjct: 627 GLLSDTFTFNI-----IIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAF 681
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A E ++ G D +Y + + Y R +++ ++L ++ + + + Y
Sbjct: 682 DMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYN 741
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
+L G + + ++ G P+ +L++ + G +KA Q +R+
Sbjct: 742 TMLSGICSDILDRAMILTAKLLK-MGFIPNVITTNMLLSHFCKQGMPEKALIWGQKLRE 799
>gi|297737325|emb|CBI26526.3| unnamed protein product [Vitis vinifera]
Length = 1005
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 98/250 (39%), Gaps = 5/250 (2%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ E + +K++H + Q AEN + G D V + AG L
Sbjct: 672 KGIELGVVSISKVVHALANYGKHQEAENVIRRSFEDGLELDTVAYNTFINAMLGAGRLHF 731
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG--SEVYKAL 281
A ++ + LG ++Y +M+ Y R LD+ + + V V + Y L
Sbjct: 732 ANSIYDRMVSLGVAPSIQTYNTMISVYGRGRKLDKAVEMFNKARCSGVGVSLDEKTYTNL 791
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+ Y G S A +F +Q GI P ++IN Y AG +A FQ M + G
Sbjct: 792 ISYYGKAGKSHEASLLFREMQEEGIKPGKVSYNIMINVYATAGLHHEAQELFQAMLRDGC 851
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE- 400
P ++ A + + A E ++ ++ +G + L + F + G EE E
Sbjct: 852 SPDSLTYLALIRAYTQSFKFLEAEETIMSMQNEGVLPSCVHFNQLLSAFAKAGFTEEAER 911
Query: 401 --HVLREYGL 408
H L GL
Sbjct: 912 VYHTLLSAGL 921
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 82/173 (47%), Gaps = 1/173 (0%)
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
+ YT +I YGK + A M+ G +V+ +M+ +Y+ AG A+E F+
Sbjct: 786 KTYTNLISYYGKAGKSHEASLLFREMQEEGIKPGKVSYNIMINVYATAGLHHEAQELFQA 845
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
+ G D +Y +++ AY ++ E + M + V + LL ++ G
Sbjct: 846 MLRDGCSPDSLTYLALIRAYTQSFKFLEAEETIMSMQNEGVLPSCVHFNQLLSAFAKAGF 905
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
+E A+RV+ + AG++PD ++ Y G +K T F+ +R++ +EP
Sbjct: 906 TEEAERVYHTLLSAGLSPDVACYRTMLRGYLDYGCVEKGITFFEQIRES-VEP 957
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 106/231 (45%), Gaps = 5/231 (2%)
Query: 180 YGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLD 239
Y K A + M++ + D+V +++ +Y K G + AE+TF+E + LG +
Sbjct: 356 YYKNGDYSRAVSLFSEMEKNKIVADEVIYGLLIRIYGKLGLYEDAEKTFKETEQLGLLTN 415
Query: 240 KRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFE 299
+++Y +M ++ +G ++ ++ M ++ ++ Y LL+ Y M + A+ F+
Sbjct: 416 EKTYIAMAQVHLNSGNFEKALTIMELMRSRNIWFSRFSYIVLLQCYVMKEDLASAEATFQ 475
Query: 300 AIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKEN 359
A+ G+ PDA C ++N Y +KA +RK +E + ++ K+
Sbjct: 476 ALSKTGL-PDAGSCNDMLNLYIKLDLLEKAKDFIFQIRKDPVEFDMELCKTVMKVYCKKG 534
Query: 360 QLNRALEFLIDLERDGFMVGKEASCTLAAWFKRL----GVVEEVEHVLREY 406
L A + + ++ +G E TL+ K L G + H++ ++
Sbjct: 535 MLRDAKQLIQEMGTNGLFKDSEFIQTLSLILKMLLKTAGGLSVASHLISKF 585
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 80/186 (43%), Gaps = 2/186 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGF--ICDQVTLTVMVVMYSKAGNLKMAEE 226
+I+ Y +I YG+ ++ A + G D+ T T ++ Y KAG A
Sbjct: 747 SIQTYNTMISVYGRGRKLDKAVEMFNKARCSGVGVSLDEKTYTNLISYYGKAGKSHEASL 806
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
F E++ G K SY M+ Y AG+ + L + M S Y AL+R Y+
Sbjct: 807 LFREMQEEGIKPGKVSYNIMINVYATAGLHHEAQELFQAMLRDGCSPDSLTYLALIRAYT 866
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
+ A+ ++Q G+ P L++A+ AG +++A + + AGL P
Sbjct: 867 QSFKFLEAEETIMSMQNEGVLPSCVHFNQLLSAFAKAGFTEEAERVYHTLLSAGLSPDVA 926
Query: 347 CVALIL 352
C +L
Sbjct: 927 CYRTML 932
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/283 (19%), Positives = 117/283 (41%), Gaps = 41/283 (14%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+L ++S + D++ + G ++ + T MK GF+ ++VT ++++ + SK G
Sbjct: 271 SLQKKSLHGKVIDFSLVKDGL-----VEESFKTFYEMKNLGFVPEEVTYSLLISLSSKTG 325
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
N A + +E+++ + S++ Y + G R L EM+ ++ +Y
Sbjct: 326 NRDEAIKLYEDMRYRRIVPSNYTCASLLTLYYKNGDYSRAVSLFSEMEKNKIVADEVIYG 385
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT-------- 331
L+R Y G E A++ F+ + G+ + + + + +G +KA T
Sbjct: 386 LLIRIYGKLGLYEDAEKTFKETEQLGLLTNEKTYIAMAQVHLNSGNFEKALTIMELMRSR 445
Query: 332 ---------------------------AFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
FQ + K GL + C + L+ K + L +A
Sbjct: 446 NIWFSRFSYIVLLQCYVMKEDLASAEATFQALSKTGLPDAGSCNDM-LNLYIKLDLLEKA 504
Query: 365 LEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYG 407
+F+ + +D E T+ + + G++ + + +++E G
Sbjct: 505 KDFIFQIRKDPVEFDMELCKTVMKVYCKKGMLRDAKQLIQEMG 547
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 100/217 (46%), Gaps = 20/217 (9%)
Query: 206 VTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLRE 265
+ T+++ +Y + G +K+AE+ F E+ G D+ + G+M+ Y R G R + +L
Sbjct: 193 IVYTILLRVYGQVGKIKLAEQAFLEMLEAGCEPDEVACGTMLCTYARWG---RHKAMLSF 249
Query: 266 MDAQE-----------VYVGSEVYKALLRG----YSM--NGNSEGAQRVFEAIQFAGITP 308
A + ++ S + K L G +S+ +G E + + F ++ G P
Sbjct: 250 YSAVQERGIIPSIAVFNFMLSSLQKKSLHGKVIDFSLVKDGLVEESFKTFYEMKNLGFVP 309
Query: 309 DARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFL 368
+ +LLI+ G +A +++MR + PS+ A +L+ K +RA+
Sbjct: 310 EEVTYSLLISLSSKTGNRDEAIKLYEDMRYRRIVPSNYTCASLLTLYYKNGDYSRAVSLF 369
Query: 369 IDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++E++ + + L + +LG+ E+ E +E
Sbjct: 370 SEMEKNKIVADEVIYGLLIRIYGKLGLYEDAEKTFKE 406
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 97/234 (41%), Gaps = 4/234 (1%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKL 233
+ +I + ++ I A+N + + G + ++ ++ +Y K LK A E F I+
Sbjct: 579 SHLISKFTREGDISKAQNLNDQLVKLGRGAEDASIASLITLYGKQHKLKKAIEVFSAIE- 637
Query: 234 LGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEG 293
G K Y SM+ AY + G + L E+ + + +G ++ + G +
Sbjct: 638 -GCTSGKLIYISMIDAYAKCGKAEEAYHLYEEVTGKGIELGVVSISKVVHALANYGKHQE 696
Query: 294 AQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILS 353
A+ V G+ D INA AG+ A + + M G+ PS + ++S
Sbjct: 697 AENVIRRSFEDGLELDTVAYNTFINAMLGAGRLHFANSIYDRMVSLGVAPSIQTYNTMIS 756
Query: 354 ACEKENQLNRALEFLIDLERDGFMVG--KEASCTLAAWFKRLGVVEEVEHVLRE 405
+ +L++A+E G V ++ L +++ + G E + RE
Sbjct: 757 VYGRGRKLDKAVEMFNKARCSGVGVSLDEKTYTNLISYYGKAGKSHEASLLFRE 810
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 14/205 (6%)
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL 221
L+ S++ ++ YT ++ YG+ +I+ AE L M G D+V M+ Y++ G
Sbjct: 184 LQLSYQPSVIVYTILLRVYGQVGKIKLAEQAFLEMLEAGCEPDEVACGTMLCTYARWGRH 243
Query: 222 KMAEETFEEIKLLG------------EPLDKRSYGSMVMAY--VRAGMLDRGEVLLREMD 267
K + ++ G L K+S V+ + V+ G+++ EM
Sbjct: 244 KAMLSFYSAVQERGIIPSIAVFNFMLSSLQKKSLHGKVIDFSLVKDGLVEESFKTFYEMK 303
Query: 268 AQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQ 327
Y L+ S GN + A +++E +++ I P CA L+ Y G
Sbjct: 304 NLGFVPEEVTYSLLISLSSKTGNRDEAIKLYEDMRYRRIVPSNYTCASLLTLYYKNGDYS 363
Query: 328 KAYTAFQNMRKAGLEPSDKCVALIL 352
+A + F M K + + L++
Sbjct: 364 RAVSLFSEMEKNKIVADEVIYGLLI 388
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 77/179 (43%), Gaps = 1/179 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
EE + Y +I+ Y A+ AM R G D +T ++ Y+++
Sbjct: 813 EEGIKPGKVSYNIMINVYATAGLHHEAQELFQAMLRDGCSPDSLTYLALIRAYTQSFKFL 872
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
AEET ++ G + ++ A+ +AG + E + + + + Y+ +L
Sbjct: 873 EAEETIMSMQNEGVLPSCVHFNQLLSAFAKAGFTEEAERVYHTLLSAGLSPDVACYRTML 932
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
RGY G E FE I+ + PD + + ++ Y++AG+ +A +M+ G+
Sbjct: 933 RGYLDYGCVEKGITFFEQIR-ESVEPDRFIMSSAVHFYKLAGKELEAEGILDSMKSLGI 990
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 99/208 (47%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I +T +I GY ++ + + +RG + + VT +++V + ++G +K+AEE F
Sbjct: 357 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 416
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+ G D +YG ++ G L++ + ++ ++ +G +Y ++ G
Sbjct: 417 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 476
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G E A +F ++ G+ P+ ++I+ G +A + M + G P+D
Sbjct: 477 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 536
Query: 349 ALILSACEKENQLNRALEFLIDLERDGF 376
++ A ++ L + + + +++ GF
Sbjct: 537 NTLIRAHLRDGDLTASAKLIEEMKSCGF 564
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 91/215 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ NI Y ++ GY + ++ A N L M R D VT T ++ Y
Sbjct: 314 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 373
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ + F I G + +Y +V + ++G + E L +EM + V Y
Sbjct: 374 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 433
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL G NG E A +FE +Q + + M +I G+ + A+ F ++ G
Sbjct: 434 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKG 493
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
++P+ +++S K+ L+ A L +E DG
Sbjct: 494 VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 528
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 107/246 (43%), Gaps = 4/246 (1%)
Query: 157 AELALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMV 212
A ++L +E ++++ Y ++ G K + + L M R + + +T V++
Sbjct: 236 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 295
Query: 213 VMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY 272
++ K G L+ A E ++E+ G + +Y +++ Y L +L M +
Sbjct: 296 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 355
Query: 273 VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTA 332
+ +L++GY M + +VF I G+ +A ++L+ + +G+ + A
Sbjct: 356 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 415
Query: 333 FQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKR 392
FQ M G+ P ++L +L +ALE DL++ +G T+ +
Sbjct: 416 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 475
Query: 393 LGVVEE 398
G VE+
Sbjct: 476 GGKVED 481
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/245 (17%), Positives = 102/245 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E + ++ Y I++G + A + L M+ R D T + ++ + G
Sbjct: 174 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGC 233
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A F+E++ G +Y S+V +AG + G +LL++M ++E+ +
Sbjct: 234 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 293
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL + G + A +++ + GI+P+ L++ Y M + +A M +
Sbjct: 294 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 353
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
P ++ +++ ++ ++ + G + L F + G ++ E
Sbjct: 354 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 413
Query: 401 HVLRE 405
+ +E
Sbjct: 414 ELFQE 418
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/203 (18%), Positives = 86/203 (42%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
+E + + +I G + ++ A + M G D VT +V ++G+ +A
Sbjct: 144 YEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLAL 203
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+ +++ D +Y +++ + R G +D L +EM+ + + Y +L+RG
Sbjct: 204 DLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL 263
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
G + + + I P+ +L++ + G+ Q+A ++ M G+ P+
Sbjct: 264 CKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNI 323
Query: 346 KCVALILSACEKENQLNRALEFL 368
++ +N+L+ A L
Sbjct: 324 ITYNTLMDGYCMQNRLSEANNML 346
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/186 (19%), Positives = 72/186 (38%), Gaps = 35/186 (18%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM---------------- 211
AN Y+ ++ G+ + +I+ AE M G + D +T ++
Sbjct: 391 ANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEI 450
Query: 212 ------------VVMYS-------KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVR 252
+VMY+ K G ++ A F + G + +Y M+ +
Sbjct: 451 FEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCK 510
Query: 253 AGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARM 312
G L +LLR+M+ Y L+R + +G+ + ++ E ++ G + DA
Sbjct: 511 KGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASS 570
Query: 313 CALLIN 318
++I+
Sbjct: 571 IKMVID 576
>gi|15240649|ref|NP_199839.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170477|sp|Q9FGR7.1|PP426_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g50280, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 1006; Flags: Precursor
gi|9759030|dbj|BAB09399.1| unnamed protein product [Arabidopsis thaliana]
gi|332008538|gb|AED95921.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 723
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 98/213 (46%), Gaps = 1/213 (0%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M+++G + + ++ Y+K+ +++ E F E++ G +Y ++ AY R
Sbjct: 370 MEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQ 429
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN-SEGAQRVFEAIQFAGITPDARMCA 314
D E LLREM+ + + Y L+ Y S+ A F ++ G+ P +
Sbjct: 430 PDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYT 489
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
LI+AY ++G +KAY +F+ M K G++PS + +L A + + +E + R+
Sbjct: 490 ALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLRE 549
Query: 375 GFMVGKEASCTLAAWFKRLGVVEEVEHVLREYG 407
+ TL F + G+ E V+ E+
Sbjct: 550 KIKGTRITYNTLLDGFAKQGLYIEARDVVSEFS 582
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 94/210 (44%), Gaps = 8/210 (3%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG-NLKMAEET 227
++R Y I G + +A AM + D VT +++ KAG + K E
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEI 331
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
FE++ G + +G +V ++ G+ + V+ EM+ + + + VY L+ Y+
Sbjct: 332 FEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNK 391
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
+ + E + +F ++ G+ P A +L++AY Q T + M GLEP+ K
Sbjct: 392 SNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKS 451
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFM 377
++SA + +++ D+ D F+
Sbjct: 452 YTCLISAYGRTKKMS-------DMAADAFL 474
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 114/256 (44%), Gaps = 23/256 (8%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRD 172
+ P + L+ A+ R M+P + L L+ ME +L L E N++
Sbjct: 410 LKPSAATYNILMDAYARRMQPDIVETL-----LREME--------DLGL-----EPNVKS 451
Query: 173 YTKIIHGYGKKMQIQN-AENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEI 231
YT +I YG+ ++ + A + L MK+ G + T ++ YS +G + A +FEE+
Sbjct: 452 YTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEM 511
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVL-LREMDAQEVYVGSEV-YKALLRGYSMNG 289
G +Y S++ A+ R+G D G+++ + ++ +E G+ + Y LL G++ G
Sbjct: 512 CKEGIKPSVETYTSVLDAFRRSG--DTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQG 569
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
A+ V G+ P +L+NAY GQ K + M L+P +
Sbjct: 570 LYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYS 629
Query: 350 LILSACEKENQLNRAL 365
++ A + RA
Sbjct: 630 TMIYAFVRVRDFKRAF 645
>gi|358347154|ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 989
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 100/215 (46%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+ E + N Y II+ K ++ A N M RG D VT T ++ K G
Sbjct: 382 MYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGK 441
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
K AEE FE I L + +Y +++ Y + G ++ E++L++M+ + V + +
Sbjct: 442 TKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSS 501
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ GY+ G A V + + P+ + A+LI+ Y AG+ A + M+
Sbjct: 502 IINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRR 561
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
LE S+ ++L+ ++ +++ A +ID+ G
Sbjct: 562 LEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKG 596
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 93/205 (45%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ + + YT +I Y K + ++ + + M G + D VT + ++ + + G L
Sbjct: 315 KNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTE 374
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F E+ +G + SY +++ + ++G + L +M + + ++
Sbjct: 375 AAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMD 434
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G ++ A+ VFE I + P+ + L++ Y G+ + A Q M K + P
Sbjct: 435 GLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPP 494
Query: 344 SDKCVALILSACEKENQLNRALEFL 368
+ + I++ K+ L++A++ L
Sbjct: 495 NVITFSSIINGYAKKGMLSKAVDVL 519
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 103/263 (39%), Gaps = 24/263 (9%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
L +S NI ++ GY + +Q AE + + G D + L ++ Y +A
Sbjct: 192 GLCFDSITCNI-----LVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAV 246
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLRE----------MDAQ 269
+ A E E +D +Y +++ A+ + G L R E L E +
Sbjct: 247 LMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNN 306
Query: 270 EVYVGSEV---------YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAY 320
+V +E+ Y L+ Y E + +++ + GI PD C+ ++ +
Sbjct: 307 DVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGF 366
Query: 321 QMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGK 380
G+ +A F+ M + GL+P+ A I+++ K ++ A + G
Sbjct: 367 CRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDI 426
Query: 381 EASCTLAAWFKRLGVVEEVEHVL 403
T+ ++G +E E V
Sbjct: 427 VTCTTVMDGLFKVGKTKEAEEVF 449
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 88/189 (46%), Gaps = 1/189 (0%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKL 233
T ++ G K + + AE + + + VT + ++ Y K G +++AE ++++
Sbjct: 430 TTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEK 489
Query: 234 LGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEG 293
P + ++ S++ Y + GML + +LREM + V + VY L+ GY G +
Sbjct: 490 EHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDV 549
Query: 294 AQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILS 353
A + ++ + + +L+N + G+ +A + +M G++P A ++
Sbjct: 550 ADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLID 609
Query: 354 ACEKE-NQL 361
KE NQL
Sbjct: 610 GYFKEGNQL 618
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 80/182 (43%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+L+ + N Y+ ++ GY K +++ AE L M++ + +T + ++ Y+K G
Sbjct: 451 TILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKG 510
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
L A + E+ + Y ++ Y +AG D + +EM ++ + + ++
Sbjct: 511 MLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFD 570
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
LL G + A+ + + GI PD A LI+ Y G A + Q M++
Sbjct: 571 ILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEK 630
Query: 340 GL 341
+
Sbjct: 631 NI 632
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 2/165 (1%)
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G + D ++ V+V K G+L +A ++ +D +Y +++ + + G++D+G
Sbjct: 124 GVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVV--DIDNVTYNTVIWGFCQKGLVDQG 181
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
LL EM + + S L++GY G + A+ V + G+T D LI+
Sbjct: 182 FGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDG 241
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
Y A +A +N ++ ++ +L A K L RA
Sbjct: 242 YCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRA 286
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 108/267 (40%), Gaps = 16/267 (5%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E + Y II+ Y K + ++A + L MK G + + VT +++ K G
Sbjct: 661 MIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGF 720
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVM----AYVRAGM-LDRGEVLLREMDAQEVYVGS 275
+ T K L + + ++ V +G+ L R +V+L EM + +
Sbjct: 721 V----PTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELKRQKVVLDEMVKRGISADL 776
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTA--- 332
Y AL+RGY + E A + + + GI P+ L+ AG ++
Sbjct: 777 VTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEK 836
Query: 333 -FQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFK 391
M + GL P+ +++S + + + I++ GF+ + L + +
Sbjct: 837 LVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYA 896
Query: 392 RLGVVEEVEHVLREYGLRETYSKIPGS 418
+ G + E +L + T +IP S
Sbjct: 897 KSGKMIEARELLNDL---LTKGRIPNS 920
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 75/184 (40%), Gaps = 1/184 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ + N Y +I GY K + A++ MK R V +++ + G
Sbjct: 522 MVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGR 581
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A ++ G D +Y S++ Y + G +++EM + + Y A
Sbjct: 582 MDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNA 641
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L++G G + I+ G+ PD +IN Y + G+++ A M+ G
Sbjct: 642 LIKGLLRLGKYDPRYVCSRMIEL-GLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYG 700
Query: 341 LEPS 344
+ P+
Sbjct: 701 IMPN 704
>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Vitis vinifera]
Length = 708
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 110/248 (44%), Gaps = 5/248 (2%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E N+ ++T +I+G K+ I+ A L M RRG+ + T T ++ K G
Sbjct: 285 MVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGW 344
Query: 221 LKMAEETFEEIKLL---GEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
+ A F +KL+ G + +Y +M+ Y + L+R E+LL M Q + +
Sbjct: 345 TEKAFRLF--LKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNT 402
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y L+ G+ GN A + + + G +P+ +I+ G +AY +
Sbjct: 403 YTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVS 462
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
GL+ +++S ++ NR+L F + + GF + TL + F R ++
Sbjct: 463 VHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMK 522
Query: 398 EVEHVLRE 405
E E + E
Sbjct: 523 ESERLFEE 530
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 92/212 (43%), Gaps = 2/212 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+E F NI Y II G KK + A L + G D VT T+++ ++ + +
Sbjct: 428 KEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTN 487
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
+ F ++ +G D SY +++ + R + E L E + + + Y +++
Sbjct: 488 RSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMI 547
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
GY GN+ A ++F+ + G PD+ LI+ + A + M GL
Sbjct: 548 CGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLS 607
Query: 343 PSDKC-VALILSACEKENQLNRALEFLIDLER 373
P + + L C+K++ + A+ L LE+
Sbjct: 608 PCEVTRLTLAYEYCKKDDS-STAINVLDRLEK 638
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 1/197 (0%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ ++ N+ YT +I+GY K+ ++ AE L M+ +G + + T T ++ + K GN
Sbjct: 359 DGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVR 418
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A E + + G + +Y +++ + G LD LL ++ + Y L+
Sbjct: 419 AYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMS 478
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
+ ++ + F + G TPD LI+ + Q +++ F+ GL P
Sbjct: 479 VHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIP 538
Query: 344 SDKC-VALILSACEKEN 359
+ K ++I C N
Sbjct: 539 TKKTYTSMICGYCRYGN 555
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 90/210 (42%), Gaps = 1/210 (0%)
Query: 186 IQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGS 245
++ AEN + M +RG D V+ +MVV G + AE + G +D +
Sbjct: 205 VEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTL 264
Query: 246 MVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAG 305
++ A+ + G ++R +M + + AL+ G G+ + A + E + G
Sbjct: 265 IIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRG 324
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNM-RKAGLEPSDKCVALILSACEKENQLNRA 364
P+ LI+ G ++KA+ F + R G +P+ +++ KE++LNRA
Sbjct: 325 WKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRA 384
Query: 365 LEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
L ++ G + TL ++G
Sbjct: 385 EMLLSRMQEQGLVPNTNTYTTLIDGHCKVG 414
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 48/106 (45%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L+ F +I YT +I + ++ Q++ +E G I + T T M+ Y + GN
Sbjct: 496 MLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGN 555
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
+A + F+ + G D +YG+++ + LD L M
Sbjct: 556 TSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAM 601
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 72/166 (43%)
Query: 211 MVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE 270
MV+ +++ G LK A E++ G ++ ++ V G+++ E + EM +
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219
Query: 271 VYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAY 330
V +K ++ G A+R A+ G D C L+I+A+ G +
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV 279
Query: 331 TAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
F M + GL P+ +++ K+ + +A E L ++ R G+
Sbjct: 280 GYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGW 325
>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
Length = 708
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 110/248 (44%), Gaps = 5/248 (2%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E N+ ++T +I+G K+ I+ A L M RRG+ + T T ++ K G
Sbjct: 285 MVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGW 344
Query: 221 LKMAEETFEEIKLL---GEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
+ A F +KL+ G + +Y +M+ Y + L+R E+LL M Q + +
Sbjct: 345 TEKAFRLF--LKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNT 402
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y L+ G+ GN A + + + G +P+ +I+ G +AY +
Sbjct: 403 YTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVS 462
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
GL+ +++S ++ NR+L F + + GF + TL + F R ++
Sbjct: 463 VHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMK 522
Query: 398 EVEHVLRE 405
E E + E
Sbjct: 523 ESERLFEE 530
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 92/212 (43%), Gaps = 2/212 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+E F NI Y II G KK + A L + G D VT T+++ ++ + +
Sbjct: 428 KEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTN 487
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
+ F ++ +G D SY +++ + R + E L E + + + Y +++
Sbjct: 488 RSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMI 547
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
GY GN+ A ++F+ + G PD+ LI+ + A + M GL
Sbjct: 548 CGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLS 607
Query: 343 PSDKC-VALILSACEKENQLNRALEFLIDLER 373
P + + L C+K++ + A+ L LE+
Sbjct: 608 PCEVTRLTLAYEYCKKDDS-STAINVLDRLEK 638
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 1/197 (0%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ ++ N+ YT +I+GY K+ ++ AE L M+ +G + + T T ++ + K GN
Sbjct: 359 DGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVR 418
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A E + + G + +Y +++ + G LD LL ++ + Y L+
Sbjct: 419 AYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMS 478
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
+ ++ + F + G TPD LI+ + Q +++ F+ GL P
Sbjct: 479 VHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIP 538
Query: 344 SDKC-VALILSACEKEN 359
+ K ++I C N
Sbjct: 539 TKKTYTSMICGYCRYGN 555
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 91/210 (43%), Gaps = 1/210 (0%)
Query: 186 IQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGS 245
++ AEN + M +RG D V+ +MVV G + AE+ + G +D +
Sbjct: 205 VEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTL 264
Query: 246 MVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAG 305
++ A+ + G ++R +M + + AL+ G G+ + A + E + G
Sbjct: 265 IIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRG 324
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNM-RKAGLEPSDKCVALILSACEKENQLNRA 364
P+ LI+ G ++KA+ F + R G +P+ +++ KE++LNRA
Sbjct: 325 WKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRA 384
Query: 365 LEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
L ++ G + TL ++G
Sbjct: 385 EMLLSRMQEQGLVPNTNTYTTLIDGHCKVG 414
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 48/106 (45%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L+ F +I YT +I + ++ Q++ +E G I + T T M+ Y + GN
Sbjct: 496 MLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGN 555
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
+A + F+ + G D +YG+++ + LD L M
Sbjct: 556 TSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAM 601
>gi|473874|gb|AAA17740.1| a membrane-associated salt-inducible protein [Nicotiana tabacum]
Length = 435
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 106/230 (46%), Gaps = 2/230 (0%)
Query: 170 IRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFE 229
++ Y +I G +K Q+ A + M G ++ T T ++ Y+ G+ A E F
Sbjct: 101 VQTYNALILGLVEKRQMDKAVEVVDEMLLAGIRPNERTYTTIMDGYASLGDTGKAFEYFS 160
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
IK G LD +Y +++ A ++G ++ + +EM+A+ + + VY L+ G++
Sbjct: 161 RIKDEGLELDVYTYEALLKACCKSGRIESALAVTKEMNAKNIPRNTFVYNILIDGWARRS 220
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
+ A + + ++ G+ PD +NA AG QKA Q M++ GL P K +
Sbjct: 221 DVWEAADLMQQMRQEGVQPDIHTYTSFVNACCKAGDMQKAMNTIQEMKRVGLNPMLKPIP 280
Query: 350 LILSACEKENQLNRALEFLIDLERDGFMVGKEA-SCTLAAWFKRLGVVEE 398
L + + +AL+ ++++ G K C + + R V E+
Sbjct: 281 LSYTVGHA-SLPEKALKCFEEMKKSGLKPDKAVYHCLMTSLLSRATVAED 329
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 47/254 (18%), Positives = 96/254 (37%), Gaps = 43/254 (16%)
Query: 166 FEANIRD--------YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSK 217
FE IRD Y II + + A + MK+ T ++ ++K
Sbjct: 19 FEDVIRDGLKPDVVLYNNIIRAFCGMGNMDRALRIVEQMKKERHRPTSRTFMPIIHAFAK 78
Query: 218 AGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
AG ++ A + F+ ++ G ++Y ++++ V +D+ ++ EM +
Sbjct: 79 AGAIRKALDVFDMMRRSGCIPTVQTYNALILGLVEKRQMDKAVEVVDEMLLAGIRPNERT 138
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDA-------RMCA---------------- 314
Y ++ GY+ G++ A F I+ G+ D + C
Sbjct: 139 YTTIMDGYASLGDTGKAFEYFSRIKDEGLELDVYTYEALLKACCKSGRIESALAVTKEMN 198
Query: 315 ------------LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLN 362
+LI+ + +A Q MR+ G++P ++AC K +
Sbjct: 199 AKNIPRNTFVYNILIDGWARRSDVWEAADLMQQMRQEGVQPDIHTYTSFVNACCKAGDMQ 258
Query: 363 RALEFLIDLERDGF 376
+A+ + +++R G
Sbjct: 259 KAMNTIQEMKRVGL 272
>gi|302768873|ref|XP_002967856.1| hypothetical protein SELMODRAFT_169254 [Selaginella moellendorffii]
gi|300164594|gb|EFJ31203.1| hypothetical protein SELMODRAFT_169254 [Selaginella moellendorffii]
Length = 731
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 94/215 (43%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E N +I K +A M++RG T V S +GNL+
Sbjct: 215 ENPINPNHVTMCSLIDACSKAGDGDSAYEVYTMMRKRGIGGCPEPYTAAVHACSSSGNLE 274
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A ++++K G D+ + +++ A +D +L+E++ + G ++ +L+
Sbjct: 275 RAFSIYDDMKKDGVKPDEIFFSALIDVAGHASKIDCAFDVLQEVEKYSLVPGPVIFSSLM 334
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
S GN E A ++E IQ GI P L+ A Q Q A + + +++AG+
Sbjct: 335 GVCSNTGNWEKAIFLYENIQAVGIRPSVSTLNALMTALCRGKQFQNALQSLEELKEAGVS 394
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
P+ +++L ACEKEN+ AL DG +
Sbjct: 395 PNQLTYSILLEACEKENEAGIALNLYTHAIADGIV 429
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 98/246 (39%), Gaps = 38/246 (15%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
EAN+ Y II G + ++ A M + D+V ++ ++G +K A E
Sbjct: 148 EANLLTYGAIIDGCARTGELAKAFGIYRIMLSKKIKPDRVIFNSLINACGRSGAVKRAFE 207
Query: 227 TFEEIKLLGEPLDKR--SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
F E+K P++ + S++ A +AG D + M + + E Y A +
Sbjct: 208 VFTELKS-ENPINPNHVTMCSLIDACSKAGDGDSAYEVYTMMRKRGIGGCPEPYTAAVHA 266
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA--------------------- 323
S +GN E A +++ ++ G+ PD + LI+ A
Sbjct: 267 CSSSGNLERAFSIYDDMKKDGVKPDEIFFSALIDVAGHASKIDCAFDVLQEVEKYSLVPG 326
Query: 324 --------------GQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLI 369
G +KA ++N++ G+ PS + +++A + Q AL+ L
Sbjct: 327 PVIFSSLMGVCSNTGNWEKAIFLYENIQAVGIRPSVSTLNALMTALCRGKQFQNALQSLE 386
Query: 370 DLERDG 375
+L+ G
Sbjct: 387 ELKEAG 392
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 75/193 (38%), Gaps = 19/193 (9%)
Query: 185 QIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYG 244
+ A A+KR GF D + T ++ SKA + + +L +
Sbjct: 79 DMNGAFGAFAALKRAGFKPDCMIYTTLISTCSKALKTDLVFQARNPGPIL-------HWT 131
Query: 245 SMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFA 304
+ V+A V REM++ V Y A++ G + G A ++ +
Sbjct: 132 NSVLAQV-----------YREMESVGVEANLLTYGAIIDGCARTGELAKAFGIYRIMLSK 180
Query: 305 GITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG-LEPSDKCVALILSACEKENQLNR 363
I PD + LINA +G ++A+ F ++ + P+ + ++ AC K +
Sbjct: 181 KIKPDRVIFNSLINACGRSGAVKRAFEVFTELKSENPINPNHVTMCSLIDACSKAGDGDS 240
Query: 364 ALEFLIDLERDGF 376
A E + + G
Sbjct: 241 AYEVYTMMRKRGI 253
>gi|255661192|gb|ACU25765.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 426
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 99/212 (46%), Gaps = 4/212 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 213 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDR 272
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ Y +M++AY RAG++ + LL E+ + L
Sbjct: 273 AAMLFQKLRNSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHIL-- 330
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
+ G E A VF AG D + LI+ + + F MR+ P
Sbjct: 331 --AAAGRJEEATWVFRQAIDAGEVKDITVFERLIHLFSKYKKYXNVVEVFDKMRERRYFP 388
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDG 375
+AL+L+A K ++ +A ++++ +G
Sbjct: 389 DSNVIALVLNAYGKLHEFEKANSVYMEMQDEG 420
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 101/233 (43%), Gaps = 4/233 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT ++ + + + A + M+ + D T +M+ +Y + G K A++ F ++
Sbjct: 117 YTTLLTMHVENKRFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMR 176
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+G + SY +++ Y A + L R M + + Y +++ Y E
Sbjct: 177 KIGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 236
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + +Q GI P++ + +I+ + G+ +A FQ +R +G+E ++
Sbjct: 237 KANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRNSGVEIDQVLYQTMI 296
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
A E+ + A L +L+R + A LAA G +EE V R+
Sbjct: 297 VAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAA----AGRJEEATWVFRQ 345
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ A + L M++ D V + ++ + K + A F +K
Sbjct: 12 YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 71
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y SM+ + +A + L+ EM V + Y LL + N
Sbjct: 72 RSGFAPDLVAYNSMINVFGKAKLFREARSLINEMRTAGVMPDTVSYTTLLTMHVENKRFL 131
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF ++ D C ++I+ Y G +++A F MRK G+EP+
Sbjct: 132 EALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGIEPN 183
>gi|255661172|gb|ACU25755.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 426
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 105/218 (48%), Gaps = 4/218 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 213 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDR 272
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ Y +M++AY R+G++ + LL E+ + + ++ +L
Sbjct: 273 AAMLFQKLRSSGVDIDQVLYQTMIVAYERSGLVAHAKRLLHELKRPD-NIPRDIAIHILA 331
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + + F M G P
Sbjct: 332 G---AGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMCGLGYFP 388
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKE 381
+AL+L+A K ++ ++A + ++++ G + E
Sbjct: 389 DSNVIALVLNAYGKLHEFDKANDVYMEMQEVGCVFSDE 426
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 101/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + M+ G + + + ++ MY + A
Sbjct: 75 FTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEAL 134
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 135 SVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 194
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + ++ Y + +KA Q M+ G+E
Sbjct: 195 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIE 251
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 252 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERSGLVAHAKRL 311
Query: 403 LRE 405
L E
Sbjct: 312 LHE 314
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 101/237 (42%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 113 NTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 172
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 173 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 232
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G++
Sbjct: 233 LEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLY 292
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE V R+
Sbjct: 293 QTMIVAYERSGLVAHAKRLLHELKRPDNIPRDIAIHILAG----AGRIEEATWVFRQ 345
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 73/172 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ A + L M++ D V + ++ + K + A F +K
Sbjct: 12 YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 71
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
D +Y +M+ + +A + L+ EM V + Y LL Y N
Sbjct: 72 RSRFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFL 131
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF ++ D C ++I+ Y G +++A F MRK G+EP+
Sbjct: 132 EALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 31/172 (18%), Positives = 75/172 (43%), Gaps = 2/172 (1%)
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
D+ +Y +++ + + G+ D L++M+ V +Y L+ + A +F
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
++ + TPD +IN + A ++A + MR AG+ P+ + +L+ +
Sbjct: 68 SRLKRSRFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVEN 127
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRE 410
+ AL ++ ++ + + +LG+ +E + + +G+R+
Sbjct: 128 KKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF--WGMRK 177
>gi|242078465|ref|XP_002444001.1| hypothetical protein SORBIDRAFT_07g005650 [Sorghum bicolor]
gi|241940351|gb|EES13496.1| hypothetical protein SORBIDRAFT_07g005650 [Sorghum bicolor]
Length = 824
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 114/268 (42%), Gaps = 17/268 (6%)
Query: 153 YLQVAELALLEESFEANIR----DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTL 208
Y V+ A+L E + + Y +I G K+M+++ AE L R G D
Sbjct: 278 YNMVSRYAVLHEIIQERVAVESIAYNMVIDGLCKEMKLEEAEKVLEIKTRHGSTPDLYGY 337
Query: 209 TVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
+ ++ Y K GNL A E + G ++ G ++ + GM+ V ++
Sbjct: 338 SYLIRTYCKTGNLGKAWHHIEAMVSHGIEINCYIVGYLLQCLKKLGMVSEVIVYFQKFRD 397
Query: 269 QEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
+++ +Y + Y GN A ++ + G+ PD LIN Y + G+++
Sbjct: 398 LGLHLDGVLYNITMDAYCKLGNMNEAVKLLNEMMAGGLVPDKIHYTCLINGYCLKGETEN 457
Query: 329 AYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA---LEFLID--LERDGFMVGKEAS 383
A+ F+ M KA ++P ++ S + + + LE ++D LE + G +
Sbjct: 458 AWQVFEQMLKANIKPDVVTYNILASGYSRNGAVIKVYDLLEHMVDQGLEPNSLTYGVAIA 517
Query: 384 CTLAAWFKRLGVVEEVE---HVLREYGL 408
C F R G + E E ++L E G+
Sbjct: 518 C-----FCREGNLSEAEVLFNILEEKGI 540
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 88/199 (44%), Gaps = 17/199 (8%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+LE++ ++ Y+K+I Y +K + NA L M RG + D + TV++ Y K G
Sbjct: 605 MLEKNAVPDVISYSKLISAYCQKRDMHNAHLWFLDMVDRG-LSDVIVYTVLMNGYCKVGR 663
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLD----------------RGEVLLR 264
L+ A + F ++ LG D +Y ++ +++ + + + LL
Sbjct: 664 LQEACDLFVQMINLGIKPDVVAYTVLLDGHIKEALHQGWQGIAKEWRSFRLRTKHKTLLS 723
Query: 265 EMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAG 324
M E+ Y L+ G+ + A+ +F+ + G+TPD LIN Y G
Sbjct: 724 SMKDMEIEPDVTCYTVLIDGHCKTEYLDEARGLFDEMLAKGLTPDVYAYTALINGYCSQG 783
Query: 325 QSQKAYTAFQNMRKAGLEP 343
+ KA Q M G++P
Sbjct: 784 EIAKAEDLLQEMTDNGMKP 802
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 92/202 (45%), Gaps = 1/202 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I+GY K + +NA M + D VT ++ YS+ G + + E +
Sbjct: 442 YTCLINGYCLKGETENAWQVFEQMLKANIKPDVVTYNILASGYSRNGAVIKVYDLLEHMV 501
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +YG + + R G L EVL ++ + + +Y +++ GY +G ++
Sbjct: 502 DQGLEPNSLTYGVAIACFCREGNLSEAEVLFNILEEKGIDNIEVLYSSMVCGYLYSGWTD 561
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +F + G D C+ LIN+ + + ++A T M + P + ++
Sbjct: 562 HAYTLFLRVAKQGNMVDNLSCSKLINSLCIDKKVEEASTVCSMMLEKNAVPDVISYSKLI 621
Query: 353 SA-CEKENQLNRALEFLIDLER 373
SA C+K + N L FL ++R
Sbjct: 622 SAYCQKRDMHNAHLWFLDMVDR 643
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 78/196 (39%), Gaps = 6/196 (3%)
Query: 161 LLEESFEANIR----DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS 216
+ E+ +ANI+ Y + GY + + + L M +G + +T V + +
Sbjct: 461 VFEQMLKANIKPDVVTYNILASGYSRNGAVIKVYDLLEHMVDQGLEPNSLTYGVAIACFC 520
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
+ GNL AE F ++ G + Y SMV Y+ +G D L + Q V +
Sbjct: 521 REGNLSEAEVLFNILEEKGIDNIEVLYSSMVCGYLYSGWTDHAYTLFLRVAKQGNMVDNL 580
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
L+ ++ E A V + PD + LI+AY A+ F +M
Sbjct: 581 SCSKLINSLCIDKKVEEASTVCSMMLEKNAVPDVISYSKLISAYCQKRDMHNAHLWFLDM 640
Query: 337 RKAGLEPSDKCVALIL 352
GL SD V +L
Sbjct: 641 VDRGL--SDVIVYTVL 654
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 69/186 (37%), Gaps = 1/186 (0%)
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G D V + + Y K GN+ A + E+ G DK Y ++ Y G +
Sbjct: 399 GLHLDGVLYNITMDAYCKLGNMNEAVKLLNEMMAGGLVPDKIHYTCLINGYCLKGETENA 458
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+ +M + Y L GYS NG + E + G+ P++ + I
Sbjct: 459 WQVFEQMLKANIKPDVVTYNILASGYSRNGAVIKVYDLLEHMVDQGLEPNSLTYGVAIAC 518
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
+ G +A F + + G++ + + ++ + A + + + G MV
Sbjct: 519 FCREGNLSEAEVLFNILEEKGIDNIEVLYSSMVCGYLYSGWTDHAYTLFLRVAKQGNMV- 577
Query: 380 KEASCT 385
SC+
Sbjct: 578 DNLSCS 583
>gi|242089043|ref|XP_002440354.1| hypothetical protein SORBIDRAFT_09g030130 [Sorghum bicolor]
gi|241945639|gb|EES18784.1| hypothetical protein SORBIDRAFT_09g030130 [Sorghum bicolor]
Length = 866
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 28/200 (14%)
Query: 156 VAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
VA L LL EA HG+ + Q++ D T T V MY
Sbjct: 332 VASLGLLAHGMEA---------HGFFLRNQLEP---------------DVYTGTAFVDMY 367
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
+K G+L+ A++ F+ ++L + ++ S+V Y AG D L+ EM +
Sbjct: 368 AKCGHLEYAQKVFDTLELR----NITTWNSLVAGYANAGQFDHALDLVEEMKRNRLDPDV 423
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
+ L+ GYS+NG S A + I+ G+TP+ LI+ G + ++ F
Sbjct: 424 TTWNGLINGYSVNGKSSQAVLLLRQIKAIGLTPNVVSWTSLISGSCNNGDYEDSFYFFNE 483
Query: 336 MRKAGLEPSDKCVALILSAC 355
M+K ++PS ++++L AC
Sbjct: 484 MQKDHVQPSVVTMSVLLRAC 503
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 102/287 (35%), Gaps = 44/287 (15%)
Query: 152 LYLQVAELALLEESFEA----NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVT 207
+Y + L ++ F+ NI + ++ GY Q +A + + MKR D T
Sbjct: 366 MYAKCGHLEYAQKVFDTLELRNITTWNSLVAGYANAGQFDHALDLVEEMKRNRLDPDVTT 425
Query: 208 LTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMD 267
++ YS G A +IK +G + S+ S++ G + EM
Sbjct: 426 WNGLINGYSVNGKSSQAVLLLRQIKAIGLTPNVVSWTSLISGSCNNGDYEDSFYFFNEMQ 485
Query: 268 AQEVYV--------------------GSEVY---------------KALLRGYSMNGNSE 292
V G E++ AL+ YS +GN
Sbjct: 486 KDHVQPSVVTMSVLLRACAGLALLKKGKELHCFALRRAYDRDMVVGTALIDMYSKSGNLA 545
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
AQR+FE IQ + M + GQ +A F +M +GL+P +L
Sbjct: 546 SAQRIFERIQENNLVSSNAM----LTGLAAHGQGHEAIALFHDMCNSGLKPDSITFTALL 601
Query: 353 SACEKENQLNRALEFLIDLE-RDGFMVGKEASCTLAAWFKRLGVVEE 398
+AC + + E+ +E R G E + R G ++E
Sbjct: 602 TACRSMDLVTEGWEYFDTMESRYGVTPTVENYACMVDLLARCGYLDE 648
>gi|422294672|gb|EKU21972.1| putative udp-glucosyltransferase, partial [Nannochloropsis gaditana
CCMP526]
Length = 535
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 92/205 (44%), Gaps = 11/205 (5%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAM-KRRG----------FICDQVTLT 209
LL ++ YT ++H Y + + AE L M + G + + +T T
Sbjct: 233 LLARGLLPDVVTYTTLMHAYAGRGDTEGAEAVLRRMLEGEGGRVREEEVLRVLPNVMTYT 292
Query: 210 VMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQ 269
++ Y+ G+++ +E E ++ + +Y ++ AY G + E +LR M +
Sbjct: 293 TLMTAYAAGGDVEGSEAVLERMEEACIAPNVMTYTVLMTAYTLRGDVKGAEGVLRRMISA 352
Query: 270 EVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
V + Y LL Y++NGN+ GA+ V ++ AG+ P A A L+ Y G+ + A
Sbjct: 353 YVAPNANTYTTLLHAYTVNGNAAGAEEVLARMEAAGVLPTALTFATLMTVYAARGEVESA 412
Query: 330 YTAFQNMRKAGLEPSDKCVALILSA 354
M AG+ P+ +L+A
Sbjct: 413 KGVLARMEAAGVGPTAMAFDTLLNA 437
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 74/161 (45%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N YT ++H Y AE L M+ G + +T ++ +Y+ G ++ A+
Sbjct: 357 NANTYTTLLHAYTVNGNAAGAEEVLARMEAAGVLPTALTFATLMTVYAARGEVESAKGVL 416
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ G ++ +++ AYV AG + E +LR +A+ Y L+ GY+
Sbjct: 417 ARMEAAGVGPTAMAFDTLLNAYVVAGDVGGAEQVLRRREAEAYPDFPLTYNTLMNGYADK 476
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
G+ GA+ V ++ G+ PD + L++AY AG A
Sbjct: 477 GDVAGAEGVLARMRAKGVGPDETTLSTLLHAYAEAGDPLGA 517
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 104/248 (41%), Gaps = 13/248 (5%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ + ++ Y + + AE L + RG + D VT T ++ Y+ G+ + AE
Sbjct: 206 DLPTFHTVMKVYADERDPEGAEMVLGWLLARGLLPDVVTYTTLMHAYAGRGDTEGAEAVL 265
Query: 229 EEIKLLGEPLDKR------------SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
+ L GE R +Y +++ AY G ++ E +L M+ +
Sbjct: 266 RRM-LEGEGGRVREEEVLRVLPNVMTYTTLMTAYAAGGDVEGSEAVLERMEEACIAPNVM 324
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
Y L+ Y++ G+ +GA+ V + A + P+A L++AY + G + A M
Sbjct: 325 TYTVLMTAYTLRGDVKGAEGVLRRMISAYVAPNANTYTTLLHAYTVNGNAAGAEEVLARM 384
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVV 396
AG+ P+ A +++ ++ A L +E G A TL + G V
Sbjct: 385 EAAGVLPTALTFATLMTVYAARGEVESAKGVLARMEAAGVGPTAMAFDTLLNAYVVAGDV 444
Query: 397 EEVEHVLR 404
E VLR
Sbjct: 445 GGAEQVLR 452
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 97/218 (44%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
++ + + NI Y +I+GY K +I A M +G + V+ ++ + + G
Sbjct: 363 VMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLG 422
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
L+ A++ F + G D +Y ++ + + G L + L R M + + +Y
Sbjct: 423 KLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYT 482
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ +GN + A+++F + G+ P ++ +IN G +A AF+NM
Sbjct: 483 ILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEAD 542
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
G P + +I+ + +RAL + ++ GF+
Sbjct: 543 GCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFI 580
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 101/250 (40%), Gaps = 4/250 (1%)
Query: 160 ALLEESFEANIR----DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
ALL E NI + ++ + K+ ++ A L M G + VT + ++ Y
Sbjct: 289 ALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGY 348
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
S ++ A + F + G + SY ++ Y +A +D L EM Q + +
Sbjct: 349 SLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNN 408
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
Y L+ G+ G AQ +F + G PD ++L++ + G KA+ F+
Sbjct: 409 VSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRA 468
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGV 395
M+ L+P+ +++ A K A + +L G + T+ + G+
Sbjct: 469 MQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGL 528
Query: 396 VEEVEHVLRE 405
++E R
Sbjct: 529 LDEALEAFRN 538
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 75/183 (40%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E + N+ Y+ +I + + A + MK +G D T T ++ K K
Sbjct: 226 EAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWK 285
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A E+ L D ++ +V + + G + +L+ M V Y +L+
Sbjct: 286 EASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLM 345
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
GYS+ + A+++F + G P+ +LIN Y A + +A F M GL
Sbjct: 346 YGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLT 405
Query: 343 PSD 345
P++
Sbjct: 406 PNN 408
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 60/141 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ ++ G+ K+ + A AM+ + V T++V K+GN K A + F E+
Sbjct: 446 YSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELF 505
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ G + Y +++ + G+LD R M+A Y ++RG + +
Sbjct: 506 VQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDES 565
Query: 293 GAQRVFEAIQFAGITPDARMC 313
A + ++ G D R C
Sbjct: 566 RALLLVGEMRDRGFIADVRPC 586
>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1023
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 100/215 (46%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+ E + N Y II+ K ++ A N M RG D VT T ++ K G
Sbjct: 382 MYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGK 441
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
K AEE FE I L + +Y +++ Y + G ++ E++L++M+ + V + +
Sbjct: 442 TKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSS 501
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ GY+ G A V + + P+ + A+LI+ Y AG+ A + M+
Sbjct: 502 IINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRR 561
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
LE S+ ++L+ ++ +++ A +ID+ G
Sbjct: 562 LEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKG 596
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 104/254 (40%), Gaps = 7/254 (2%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y +I G K ++ AE+ L M F+ +T +V YS++ +
Sbjct: 704 NAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIH 763
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++ G L Y +++ + R GM + +V+L EM + + Y AL+RGY
Sbjct: 764 EKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTG 823
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTA----FQNMRKAGLEPS 344
+ E A + + + GI P+ L+ AG ++ M + GL P+
Sbjct: 824 SHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPN 883
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
+++S + + + I++ GF+ + L + + + G + E +L
Sbjct: 884 AATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLN 943
Query: 405 EYGLRETYSKIPGS 418
+ T +IP S
Sbjct: 944 DL---LTKGRIPNS 954
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 104/263 (39%), Gaps = 24/263 (9%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
L +S NI ++ GY + +Q AE + + G D + L ++ Y +AG
Sbjct: 192 GLCFDSITCNI-----LVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAG 246
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLRE----------MDAQ 269
+ A E E +D +Y +++ A+ + G L R E L E +
Sbjct: 247 LMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNN 306
Query: 270 EVYVGSEV---------YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAY 320
+V +E+ Y L+ Y E + +++ + GI PD C+ ++ +
Sbjct: 307 DVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGF 366
Query: 321 QMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGK 380
G+ +A F+ M + GL+P+ A I+++ K ++ A + G
Sbjct: 367 CRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDI 426
Query: 381 EASCTLAAWFKRLGVVEEVEHVL 403
T+ ++G +E E V
Sbjct: 427 VTCTTVMDGLFKVGKTKEAEEVF 449
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 93/205 (45%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ + + YT +I Y K + ++ + + M G + D VT + ++ + + G L
Sbjct: 315 KNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTE 374
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F E+ +G + SY +++ + ++G + L +M + + ++
Sbjct: 375 AAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMD 434
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G ++ A+ VFE I + P+ + L++ Y G+ + A Q M K + P
Sbjct: 435 GLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPP 494
Query: 344 SDKCVALILSACEKENQLNRALEFL 368
+ + I++ K+ L++A++ L
Sbjct: 495 NVITFSSIINGYAKKGMLSKAVDVL 519
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 120/324 (37%), Gaps = 72/324 (22%)
Query: 154 LQVAELALLE---ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTV 210
+++AEL L + E N+ ++ II+GY KK + A + L M +R + + + +
Sbjct: 477 MELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAI 536
Query: 211 MVVMYSKAGNLKMAEETFEEIK-------------LL----------------------G 235
++ Y KAG +A++ +E+K LL G
Sbjct: 537 LIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKG 596
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG----------- 284
D +Y S++ Y + G +++EM + + Y AL++G
Sbjct: 597 IDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRY 656
Query: 285 -----------------------YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQ 321
Y + G +E A + ++ GI P+A +LI
Sbjct: 657 VCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLC 716
Query: 322 MAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKE 381
G +KA +A M P+ ++ A + + ++ L+ L G +
Sbjct: 717 KTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLT 776
Query: 382 ASCTLAAWFKRLGVVEEVEHVLRE 405
TL F RLG+ + + VL E
Sbjct: 777 VYNTLITVFCRLGMTRKAKVVLDE 800
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 88/189 (46%), Gaps = 1/189 (0%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKL 233
T ++ G K + + AE + + + VT + ++ Y K G +++AE ++++
Sbjct: 430 TTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEK 489
Query: 234 LGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEG 293
P + ++ S++ Y + GML + +LREM + V + VY L+ GY G +
Sbjct: 490 EHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDV 549
Query: 294 AQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILS 353
A + ++ + + +L+N + G+ +A + +M G++P A ++
Sbjct: 550 ADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLID 609
Query: 354 ACEKE-NQL 361
KE NQL
Sbjct: 610 GYFKEGNQL 618
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 80/182 (43%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+L+ + N Y+ ++ GY K +++ AE L M++ + +T + ++ Y+K G
Sbjct: 451 TILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKG 510
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
L A + E+ + Y ++ Y +AG D + +EM ++ + + ++
Sbjct: 511 MLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFD 570
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
LL G + A+ + + GI PD A LI+ Y G A + Q M++
Sbjct: 571 ILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEK 630
Query: 340 GL 341
+
Sbjct: 631 NI 632
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 2/165 (1%)
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G + D ++ V+V K G+L +A ++ +D +Y +++ + + G++D+G
Sbjct: 124 GVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVV--DIDNVTYNTVIWGFCQKGLVDQG 181
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
LL EM + + S L++GY G + A+ V + G+T D LI+
Sbjct: 182 FGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDG 241
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
Y AG +A +N ++ ++ +L A K L RA
Sbjct: 242 YCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRA 286
>gi|255660916|gb|ACU25627.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 484
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 120/266 (45%), Gaps = 4/266 (1%)
Query: 141 VLKQLKLMEHPL-YLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR 199
VL K EH L + + E + L FE N + KII G+ +++ +A LL M ++
Sbjct: 18 VLHGAKTSEHALQFFRWVERSNL---FEHNRDTHLKIIEILGRALKLNHARCILLDMPKK 74
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G D+ +M+ Y KAG ++ + + F++++ LG +SY ++ +R G
Sbjct: 75 GLEWDEDMWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVIMRRGRFMMA 134
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+ +M ++ + + L+ G+ ++G + A R FE ++ I+PD +IN
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVLIWGFFLSGKVDTANRFFEDMKSREISPDVVTYNTMING 194
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
+ +A F M+ +EP+ ++ +Q++ AL + +++ G
Sbjct: 195 CYRVKKMDEAEKYFVEMKGRNIEPTVVSYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPN 254
Query: 380 KEASCTLAAWFKRLGVVEEVEHVLRE 405
TL G + E + +L+E
Sbjct: 255 AITYSTLLPGLCDAGKMSEAQSILKE 280
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 85/202 (42%), Gaps = 8/202 (3%)
Query: 163 EESFEANIRDYT---KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
E E I+ Y K+I G+ M + N +L+ G + T V++ + +G
Sbjct: 108 ELGVERTIKSYDALFKVIMRRGRFMMAKRYFNKMLS---EGIEPTRHTFNVLIWGFFLSG 164
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ A FE++K D +Y +M+ R +D E EM + + Y
Sbjct: 165 KVDTANRFFEDMKSREISPDVVTYNTMINGCYRVKKMDEAEKYFVEMKGRNIEPTVVSYT 224
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L++GY + A R+ E ++ GI P+A + L+ AG+ +A + + M
Sbjct: 225 TLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCDAGKMSEAQSILKEMVDK 284
Query: 340 GLEPSDKCV--ALILSACEKEN 359
+ P D + LI S CE N
Sbjct: 285 YIAPKDNSIFMRLISSQCEAGN 306
>gi|297739653|emb|CBI29835.3| unnamed protein product [Vitis vinifera]
Length = 852
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 105/249 (42%)
Query: 155 QVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
Q A +L E + NI Y +I Y + A + +K+ GF D V+ T ++
Sbjct: 359 QTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNA 418
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
Y K+G + A + FE ++ + SY +++ AY G+L +L EM+ V
Sbjct: 419 YGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPN 478
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
LL G + V A + GI + I +Y G+ KA + ++
Sbjct: 479 IVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYR 538
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
MR ++P +++S C K ++ AL FL ++ + KE ++ + + G
Sbjct: 539 AMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQG 598
Query: 395 VVEEVEHVL 403
V E E +
Sbjct: 599 QVTEAESMF 607
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 108/257 (42%), Gaps = 14/257 (5%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+ E ++ + ++ Y + Q + MK D TL +++ K G
Sbjct: 258 MTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQ 317
Query: 221 LKMAEETFEEIKLLGEPLDKRS--------YGSMVMAYVRAGMLDRGEVLLREMDAQEVY 272
A + F +K +KRS + +++ Y G ++ + M A+ +
Sbjct: 318 NGKAIDIFNSMK------EKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLK 371
Query: 273 VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTA 332
Y AL+ Y+ +G + A VF I+ G PD L+NAY +G+ +KA
Sbjct: 372 PNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKV 431
Query: 333 FQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKR 392
F+ MR+ +P+ ++ A + L A+E L ++ER+G + CTL A R
Sbjct: 432 FELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGR 491
Query: 393 LGVVEEVEHVLREYGLR 409
G +++ VL LR
Sbjct: 492 CGQKVKIKSVLSAAELR 508
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 122/328 (37%), Gaps = 60/328 (18%)
Query: 115 PETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYT 174
P+ + + LL A+ + KP +A +K +LM + N+ Y
Sbjct: 407 PDVVSYTSLLNAYGKSGKPEKA-----MKVFELMR-------------RNHCKPNLVSYN 448
Query: 175 KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLL 234
+I YG K + A L M+R G + V++ ++ + G + +L
Sbjct: 449 ALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELR 508
Query: 235 GEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY---------------------- 272
G L+ +Y S + +Y+ G D+ L R M ++V
Sbjct: 509 GIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEA 568
Query: 273 -------------VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+ EVY +++ YS G A+ +F ++ G PD +I+A
Sbjct: 569 LGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHA 628
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL---EFL----IDLE 372
Y +A +KA F M ++P + ++ A K Q + L EF+ I
Sbjct: 629 YDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFN 688
Query: 373 RDGFMVGKEASCTLAAWFKRLGVVEEVE 400
F A L W + +G+++ +E
Sbjct: 689 NSSFFEMVSACSLLREWREIIGLIKLME 716
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 55/126 (43%)
Query: 243 YGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQ 302
Y M+ + R ++D+ L EM +E Y AL+ + G A + + +
Sbjct: 165 YNMMIRLHARHNIVDQARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 224
Query: 303 FAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLN 362
A I P LINA +G ++A + M + G+ P ++LSA ++ NQ +
Sbjct: 225 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYS 284
Query: 363 RALEFL 368
+ L +
Sbjct: 285 KVLSYF 290
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 63/139 (45%), Gaps = 1/139 (0%)
Query: 238 LDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG-SEVYKALLRGYSMNGNSEGAQR 296
++++ ++ + G L+ + R M Q+ Y +++Y ++R ++ + + A+
Sbjct: 124 FSRKNFPLLIREITQIGSLEHSVQVFRWMKNQKNYCARNDIYNMMIRLHARHNIVDQARG 183
Query: 297 VFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACE 356
+F +Q PDA LINA+ AGQ + A +M +A + PS +++AC
Sbjct: 184 LFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACG 243
Query: 357 KENQLNRALEFLIDLERDG 375
AL + +G
Sbjct: 244 SSGNWKEALNVCKKMTENG 262
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 30/160 (18%), Positives = 70/160 (43%)
Query: 209 TVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
+M+ ++++ + A F E++ D +Y +++ A+ RAG ++ +M
Sbjct: 166 NMMIRLHARHNIVDQARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLR 225
Query: 269 QEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
+ Y L+ +GN + A V + + G+ PD ++++AY+ Q K
Sbjct: 226 AAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSK 285
Query: 329 AYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFL 368
+ F+ M+ + P + +++ K Q +A++
Sbjct: 286 VLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAIDIF 325
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 78/207 (37%), Gaps = 35/207 (16%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I Y K+ Q+ AE+ MK G D +T T M+ Y A N + A F E++
Sbjct: 587 YSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEME 646
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVL-------------------------LRE-- 265
D + S++ A+ + G + VL LRE
Sbjct: 647 TDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFFEMVSACSLLREWR 706
Query: 266 --------MDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
M+ V + LL +G E ++F I +G + ++L+
Sbjct: 707 EIIGLIKLMEPSISVVSIGLLNQLLHFLGKSGKIETMMKLFYKIVASGAEINFYTYSILL 766
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPS 344
AG +K Q M +AGL+PS
Sbjct: 767 KNLLAAGNWRKYIEVLQWMEEAGLQPS 793
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/221 (18%), Positives = 86/221 (38%), Gaps = 3/221 (1%)
Query: 119 NLSDLLAAWV-RFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKII 177
++ LL WV RF + + + Q+ +EH + QV ++++ A Y +I
Sbjct: 112 DVEGLLNRWVGRFSRKNFPLLIREITQIGSLEHSV--QVFRWMKNQKNYCARNDIYNMMI 169
Query: 178 HGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEP 237
+ + + A M++ D T ++ + +AG + A +++ P
Sbjct: 170 RLHARHNIVDQARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIP 229
Query: 238 LDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRV 297
+ +Y +++ A +G + ++M V + +L Y
Sbjct: 230 PSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSY 289
Query: 298 FEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
FE ++ I PD ++I GQ+ KA F +M++
Sbjct: 290 FELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKE 330
>gi|357444885|ref|XP_003592720.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481768|gb|AES62971.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 553
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 100/220 (45%), Gaps = 10/220 (4%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+ + N+ T ++ YGK + NAE M+ G T +++ + + K
Sbjct: 168 KNGYAPNVVSQTALMEAYGKGGRYNNAEAIFRRMQTFGPEPSAFTYQIILKTFVQGNKFK 227
Query: 223 MAEETFEEIKLLGE---PL--DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
AEE F+ KLL + PL D++ + M+ Y ++G ++ M + + +
Sbjct: 228 EAEEVFD--KLLNDEKSPLRPDQKMFNMMIYMYKKSGSHEKARQTFALMAERGIKKATVT 285
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y +L+ S N + +++ +Q A + PD ALLINAY A + ++A F+ M
Sbjct: 286 YNSLM---SFETNYKEVSNIYDQMQRADLRPDVVSYALLINAYGKARREEEALAVFEEML 342
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
AG+ P+ K ++L A + +A + RD +M
Sbjct: 343 DAGVRPTRKAYNILLDAFSISGMVEQARIVFKSMRRDKYM 382
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 85/191 (44%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M+R D V+ +++ Y KA + A FEE+ G +++Y ++ A+ +GM
Sbjct: 306 MQRADLRPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAFSISGM 365
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
+++ ++ + M + Y +L Y + EGA++ F+ + G P+
Sbjct: 366 VEQARIVFKSMRRDKYMPDLCSYTTMLSAYVNAPDMEGAEKFFKRLIQDGFEPNVVTYGT 425
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
LI Y A +K ++ M G++ + + I+ A K + A+ + ++ +G
Sbjct: 426 LIKGYAKANDIEKVMEKYEEMLGRGIKANQTILTTIMDAHGKNGDFDSAVNWFKEMALNG 485
Query: 376 FMVGKEASCTL 386
+ ++A L
Sbjct: 486 LLPDQKAKNIL 496
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 77/164 (46%), Gaps = 4/164 (2%)
Query: 159 LALLEESFEANIRD----YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
LA+ EE +A +R Y ++ + ++ A +M+R ++ D + T M+
Sbjct: 335 LAVFEEMLDAGVRPTRKAYNILLDAFSISGMVEQARIVFKSMRRDKYMPDLCSYTTMLSA 394
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
Y A +++ AE+ F+ + G + +YG+++ Y +A +++ EM + +
Sbjct: 395 YVNAPDMEGAEKFFKRLIQDGFEPNVVTYGTLIKGYAKANDIEKVMEKYEEMLGRGIKAN 454
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLIN 318
+ ++ + NG+ + A F+ + G+ PD + +L++
Sbjct: 455 QTILTTIMDAHGKNGDFDSAVNWFKEMALNGLLPDQKAKNILLS 498
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 85/201 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y +I+ YGK + + A M G + +++ +S +G ++ A F
Sbjct: 314 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAFSISGMVEQARIVF 373
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ ++ D SY +M+ AYV A ++ E + + Y L++GY+
Sbjct: 374 KSMRRDKYMPDLCSYTTMLSAYVNAPDMEGAEKFFKRLIQDGFEPNVVTYGTLIKGYAKA 433
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
+ E +E + GI + + +++A+ G A F+ M GL P K
Sbjct: 434 NDIEKVMEKYEEMLGRGIKANQTILTTIMDAHGKNGDFDSAVNWFKEMALNGLLPDQKAK 493
Query: 349 ALILSACEKENQLNRALEFLI 369
++LS + E + A E ++
Sbjct: 494 NILLSLAKTEEDIKEANELVL 514
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 84/194 (43%), Gaps = 3/194 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+ +I+ Y K + A T M RG + T+T +M S N K +++++
Sbjct: 251 FNMMIYMYKKSGSHEKARQTFALMAERG--IKKATVTYNSLM-SFETNYKEVSNIYDQMQ 307
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
D SY ++ AY +A + + EM V + Y LL +S++G E
Sbjct: 308 RADLRPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAFSISGMVE 367
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ VF++++ PD +++AY A + A F+ + + G EP+ ++
Sbjct: 368 QARIVFKSMRRDKYMPDLCSYTTMLSAYVNAPDMEGAEKFFKRLIQDGFEPNVVTYGTLI 427
Query: 353 SACEKENQLNRALE 366
K N + + +E
Sbjct: 428 KGYAKANDIEKVME 441
>gi|225447562|ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Vitis vinifera]
Length = 616
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 110/254 (43%), Gaps = 18/254 (7%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRD 172
+SP L+ ++ A+ ++ K +A + V K+++ M F I
Sbjct: 310 ISPNVYTLNMVMCAFCKWGKLEKA--IEVFKRMETM----------------GFSPTITS 351
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I GY K + + + M++ G D VT ++ + + G L A + F E+K
Sbjct: 352 YNTLIAGYCNKGLLNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMK 411
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ +Y +++ Y + G + G L EM + Y AL+ G M G ++
Sbjct: 412 ANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTK 471
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + + + P++ + LI + S++A+ +++M ++G P+ +++
Sbjct: 472 KAAYLVKELDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLI 531
Query: 353 SACEKENQLNRALE 366
S K + A+E
Sbjct: 532 STFCKNEDFDGAVE 545
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 86/190 (45%), Gaps = 5/190 (2%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+ +I+G+ + ++ A MK + + +T ++ YS+ GN +M +E+
Sbjct: 387 FNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEML 446
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y ++++ G + L++E+D + + S + AL+ G + NSE
Sbjct: 447 RNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSE 506
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP-----SDKC 347
A ++++++ +G P+ +LI+ + A + M + + P S+ C
Sbjct: 507 RAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELC 566
Query: 348 VALILSACEK 357
L LS E+
Sbjct: 567 RGLWLSGKEE 576
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 86/208 (41%), Gaps = 2/208 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ ++ + K +++ A M+ GF + ++ Y G L +
Sbjct: 313 NVYTLNMVMCAFCKWGKLEKAIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLK 372
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ G D ++ +++ + R G L + EM A +V + Y L+ GYS
Sbjct: 373 ILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQV 432
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP-SDKC 347
GNSE R+ + + GI D LI M G+++KA + + + L P S
Sbjct: 433 GNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTF 492
Query: 348 VALILSACEKENQLNRALEFLIDLERDG 375
ALI C ++N RA + + R G
Sbjct: 493 SALITGQCVRKNS-ERAFQLYKSMIRSG 519
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 80/183 (43%), Gaps = 2/183 (1%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M+R + TL +++ + K G L+ A E F+ ++ +G SY +++ Y G+
Sbjct: 305 MQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKRMETMGFSPTITSYNTLIAGYCNKGL 364
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
L+ G L M+ V + L+ G+ G A ++F ++ + P+
Sbjct: 365 LNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNT 424
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV-ALILSACEKENQLNRALEFLIDLERD 374
LIN Y G S+ M + G++ ALIL C E + +A + +L+R+
Sbjct: 425 LINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLC-MEGRTKKAAYLVKELDRE 483
Query: 375 GFM 377
+
Sbjct: 484 NLV 486
>gi|387219245|gb|AFJ69331.1| putative udp-glucosyltransferase, partial [Nannochloropsis gaditana
CCMP526]
Length = 521
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 92/205 (44%), Gaps = 11/205 (5%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAM-KRRG----------FICDQVTLT 209
LL ++ YT ++H Y + + AE L M + G + + +T T
Sbjct: 219 LLARGLLPDVVTYTTLMHAYAGRGDTEGAEAVLRRMLEGEGGRVREEEVLRVLPNVMTYT 278
Query: 210 VMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQ 269
++ Y+ G+++ +E E ++ + +Y ++ AY G + E +LR M +
Sbjct: 279 TLMTAYAAGGDVEGSEAVLERMEEACIAPNVMTYTVLMTAYTLRGDVKGAEGVLRRMISA 338
Query: 270 EVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
V + Y LL Y++NGN+ GA+ V ++ AG+ P A A L+ Y G+ + A
Sbjct: 339 YVAPNANTYTTLLHAYTVNGNAAGAEEVLARMEAAGVLPTALTFATLMTVYAARGEVESA 398
Query: 330 YTAFQNMRKAGLEPSDKCVALILSA 354
M AG+ P+ +L+A
Sbjct: 399 KGVLARMEAAGVGPTAMAFDTLLNA 423
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 74/161 (45%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N YT ++H Y AE L M+ G + +T ++ +Y+ G ++ A+
Sbjct: 343 NANTYTTLLHAYTVNGNAAGAEEVLARMEAAGVLPTALTFATLMTVYAARGEVESAKGVL 402
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ G ++ +++ AYV AG + E +LR +A+ Y L+ GY+
Sbjct: 403 ARMEAAGVGPTAMAFDTLLNAYVVAGDVGGAEQVLRRREAEAYPDFPLTYNTLMNGYADK 462
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
G+ GA+ V ++ G+ PD + L++AY AG A
Sbjct: 463 GDVAGAEGVLARMRAKGVGPDETTLSTLLHAYAEAGDPLGA 503
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 104/248 (41%), Gaps = 13/248 (5%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ + ++ Y + + AE L + RG + D VT T ++ Y+ G+ + AE
Sbjct: 192 DLPTFHTVMKVYADERDPEGAEMVLGWLLARGLLPDVVTYTTLMHAYAGRGDTEGAEAVL 251
Query: 229 EEIKLLGEPLDKR------------SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
+ L GE R +Y +++ AY G ++ E +L M+ +
Sbjct: 252 RRM-LEGEGGRVREEEVLRVLPNVMTYTTLMTAYAAGGDVEGSEAVLERMEEACIAPNVM 310
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
Y L+ Y++ G+ +GA+ V + A + P+A L++AY + G + A M
Sbjct: 311 TYTVLMTAYTLRGDVKGAEGVLRRMISAYVAPNANTYTTLLHAYTVNGNAAGAEEVLARM 370
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVV 396
AG+ P+ A +++ ++ A L +E G A TL + G V
Sbjct: 371 EAAGVLPTALTFATLMTVYAARGEVESAKGVLARMEAAGVGPTAMAFDTLLNAYVVAGDV 430
Query: 397 EEVEHVLR 404
E VLR
Sbjct: 431 GGAEQVLR 438
>gi|410110087|gb|AFV61123.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
urticoides]
Length = 423
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 103/219 (47%), Gaps = 4/219 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y +I YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 203 KNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDR 262
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ + +M++AY RAG++ + LL E+ + + + +L
Sbjct: 263 AAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDTAIHILA 321
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + F MR G P
Sbjct: 322 G---AGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFP 378
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEA 382
+A++L+A K + ++A + ++++ G + E
Sbjct: 379 DSNVIAVVLNAYGKLQEFDKANDVYMEMQEVGCVFSDEV 417
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 102/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + MK G + + + + ++ MY + A
Sbjct: 65 FTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEAL 124
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 125 SVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 184
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + +I Y + +KA Q M+ G+E
Sbjct: 185 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIE 241
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 242 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRL 301
Query: 403 LRE 405
L E
Sbjct: 302 LHE 304
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 102/237 (43%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 103 NTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 162
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 163 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKT 222
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G+E
Sbjct: 223 LEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILF 282
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE +V R+
Sbjct: 283 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAG----AGRIEEATYVFRQ 335
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ A + L M++ D V + ++ + K + A F +K
Sbjct: 2 YSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 61
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +M+ + +A + L+ EM V + Y LL Y N
Sbjct: 62 SSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFL 121
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF ++ D C ++I+ Y G +++A F MRK G+EP+
Sbjct: 122 EALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 173
>gi|297795313|ref|XP_002865541.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311376|gb|EFH41800.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 711
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 93/202 (46%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ E +++ II G+ K A L + G TL ++ + +G
Sbjct: 265 DKLELDVQLVNDIIMGFAKSGDPSRALQLLGMAQATGLSAKTATLVSIISALANSGRTLE 324
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
AE FEE++ G ++Y +++ YV+ G L E+++ EM+ + V Y L+
Sbjct: 325 AEALFEELRQSGIKPRTKAYNALLKGYVKTGPLKDAELMVSEMEKRGVSPDEHTYSLLID 384
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
Y G E A+ V + ++ + P++ + + L+ Y+ G+ QK + + M+ G++P
Sbjct: 385 AYVNAGRWESARIVLKEMETGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKP 444
Query: 344 SDKCVALILSACEKENQLNRAL 365
+ +++ K N L+ A+
Sbjct: 445 DRQFYNVVIDTFGKFNCLDHAM 466
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 102/233 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I +GK + +A T M G D+VT ++ + K G +AEE FE ++
Sbjct: 449 YNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAME 508
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G +Y M+ +Y D + LL +M +Q + + L+ Y +G
Sbjct: 509 RRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFN 568
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A E ++ G+ P + M LINAY G S++A AF+ M GL+PS + ++
Sbjct: 569 DAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLI 628
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+A ++ + A L ++ +G TL R+ ++V V E
Sbjct: 629 NAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPGVYEE 681
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 8/210 (3%)
Query: 163 EESFEANIR--------DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
EE FEA R Y +I+ YG + + + + L MK +G + + VT T +V +
Sbjct: 501 EEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDV 560
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
Y K+G A E EE+K +G Y +++ AY + G+ ++ R M + +
Sbjct: 561 YGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPS 620
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+L+ + + A V + ++ G+ PD L+ A + QK ++
Sbjct: 621 LLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPGVYE 680
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRA 364
M +G +P K +++ SA Q RA
Sbjct: 681 EMIMSGCKPDRKARSMLRSALRYMKQTLRA 710
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/215 (18%), Positives = 97/215 (45%), Gaps = 2/215 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNA--ENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ ++++ +Y+ +I + +I + + ++R D + +++ ++K+G+
Sbjct: 227 QDGYQSDFVNYSLVIQSLTRCNKIDSVMLQRLYKEIERDKLELDVQLVNDIIMGFAKSGD 286
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A + + G + S++ A +G E L E+ + ++ Y A
Sbjct: 287 PSRALQLLGMAQATGLSAKTATLVSIISALANSGRTLEAEALFEELRQSGIKPRTKAYNA 346
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL+GY G + A+ + ++ G++PD +LLI+AY AG+ + A + M
Sbjct: 347 LLKGYVKTGPLKDAELMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMETGD 406
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
++P+ + +L+ + + + L +++ G
Sbjct: 407 VQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIG 441
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 99/235 (42%), Gaps = 2/235 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK--MAEETFEE 230
Y +I + I+ A N + M++ G+ D V ++++ ++ + M + ++E
Sbjct: 202 YNALIGACARNNDIEKALNLISRMRQDGYQSDFVNYSLVIQSLTRCNKIDSVMLQRLYKE 261
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
I+ LD + ++M + ++G R LL A + + +++ + +G
Sbjct: 262 IERDKLELDVQLVNDIIMGFAKSGDPSRALQLLGMAQATGLSAKTATLVSIISALANSGR 321
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
+ A+ +FE ++ +GI P + L+ Y G + A M K G+ P + +L
Sbjct: 322 TLEAEALFEELRQSGIKPRTKAYNALLKGYVKTGPLKDAELMVSEMEKRGVSPDEHTYSL 381
Query: 351 ILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A + A L ++E L A ++ G ++ VL+E
Sbjct: 382 LIDAYVNAGRWESARIVLKEMETGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKE 436
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 113/246 (45%), Gaps = 2/246 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E N+ + +I + K+ ++ AE M +R + VT ++ +
Sbjct: 317 MIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDR 376
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV-YK 279
L A++ F + D +Y +++ + +A ++ G L REM +Q VG+ V Y
Sbjct: 377 LDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREM-SQRGLVGNTVTYN 435
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L++G G+ + AQ++F+ + G+ PD ++L++ G+ +KA F+ ++K+
Sbjct: 436 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 495
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEV 399
+EP+ +++ K ++ + L G T+ + F R G+ EE
Sbjct: 496 KMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 555
Query: 400 EHVLRE 405
+ + RE
Sbjct: 556 DALFRE 561
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/219 (19%), Positives = 99/219 (45%), Gaps = 1/219 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y +I G+ K +++ M +RG + + VT ++ +AG+ MA++ F
Sbjct: 395 DVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 454
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+++ G P D +Y ++ + G L++ V+ + ++ Y ++ G
Sbjct: 455 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKA 514
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G E +F ++ G+ P+ + +I+ + G ++A F+ M++ G P C
Sbjct: 515 GKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCY 574
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLA 387
++ A ++ + E + ++ GF VG ++ ++
Sbjct: 575 NTLIRARLRDGDKAASAELIKEMRSCGF-VGDASTISMV 612
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/170 (20%), Positives = 75/170 (44%), Gaps = 1/170 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + +I Y+ ++ G K +++ A +++ + T +M+ KAG
Sbjct: 457 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGK 516
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ + F + L G + Y +M+ + R G+ + + L REM S Y
Sbjct: 517 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNT 576
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAY 330
L+R +G+ + + + ++ G DA +++IN G+ +K+Y
Sbjct: 577 LIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLH-DGRLEKSY 625
>gi|255553476|ref|XP_002517779.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543051|gb|EEF44586.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 486
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 84/161 (52%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I+ + +I YGK + + + MK+R F VT +++ + +AG+++ +E F
Sbjct: 304 DIKTFNILIKSYGKAGMYEKINSVIEFMKKRFFPPTVVTYNIIIETFGRAGDIENMDEYF 363
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ +K LG + +Y S+V AY +AG+L + +LR+++ +V + + + ++ Y
Sbjct: 364 KTMKHLGMKPNAITYCSLVSAYSKAGLLMKVNSILRQVENSDVVLDTTFFNCIINAYGQA 423
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
G+ + +F ++ PD A +I AY+ G ++ A
Sbjct: 424 GDVDKMAELFLEMRERECMPDNVTFATMIQAYRGQGMTEAA 464
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/284 (20%), Positives = 119/284 (41%), Gaps = 12/284 (4%)
Query: 129 RFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQN 188
+ +PR + +L L P ++ + E I YT ++ YG+ +
Sbjct: 122 HWYEPRCQTYTKLLMMLGKCRQPEEARLLFEVMQTEGLRPTIDVYTALVSAYGESGLLAK 181
Query: 189 AENTLLAMKRRGFIC--DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSM 246
A +T+ MK C D T +V++ + +K + E+ LG ++ ++
Sbjct: 182 AFSTVDEMKSVS-DCKPDVYTYSVLINICTKLHRFDLIGRILSEMSYLGVECSTVTFNTI 240
Query: 247 VMAYVRAGMLDRGEVLLREMDAQEVYVGSEV-----YKALLRGYSMNGNSEGAQRVFEAI 301
+ Y +A M E L M + +G+ V + +++ Y +G E ++ +
Sbjct: 241 INGYGKAKMFREMENSLTNM----IEIGNSVPDLFTFNSVIGAYGNSGRIEKMEKWYNEF 296
Query: 302 QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQL 361
Q GI+PD + +LI +Y AG +K + + M+K P+ +I+ + +
Sbjct: 297 QLMGISPDIKTFNILIKSYGKAGMYEKINSVIEFMKKRFFPPTVVTYNIIIETFGRAGDI 356
Query: 362 NRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
E+ ++ G C+L + + + G++ +V +LR+
Sbjct: 357 ENMDEYFKTMKHLGMKPNAITYCSLVSAYSKAGLLMKVNSILRQ 400
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/232 (19%), Positives = 102/232 (43%), Gaps = 1/232 (0%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRG-FICDQVTLTVMVVMYSKAGNLKMAE 225
E + + II+GYGK + EN+L M G + D T ++ Y +G ++ E
Sbjct: 231 ECSTVTFNTIINGYGKAKMFREMENSLTNMIEIGNSVPDLFTFNSVIGAYGNSGRIEKME 290
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+ + E +L+G D +++ ++ +Y +AGM ++ ++ M + Y ++ +
Sbjct: 291 KWYNEFQLMGISPDIKTFNILIKSYGKAGMYEKINSVIEFMKKRFFPPTVVTYNIIIETF 350
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
G+ E F+ ++ G+ P+A L++AY AG K + + + + +
Sbjct: 351 GRAGDIENMDEYFKTMKHLGMKPNAITYCSLVSAYSKAGLLMKVNSILRQVENSDVVLDT 410
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
I++A + +++ E +++ M T+ ++ G+ E
Sbjct: 411 TFFNCIINAYGQAGDVDKMAELFLEMRERECMPDNVTFATMIQAYRGQGMTE 462
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 58/130 (44%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F + Y II +G+ I+N + MK G + +T +V YSKAG L
Sbjct: 336 FPPTVVTYNIIIETFGRAGDIENMDEYFKTMKHLGMKPNAITYCSLVSAYSKAGLLMKVN 395
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+++ LD + ++ AY +AG +D+ L EM +E + + +++ Y
Sbjct: 396 SILRQVENSDVVLDTTFFNCIINAYGQAGDVDKMAELFLEMRERECMPDNVTFATMIQAY 455
Query: 286 SMNGNSEGAQ 295
G +E AQ
Sbjct: 456 RGQGMTEAAQ 465
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 104/233 (44%), Gaps = 6/233 (2%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I+ + + A M + G D + ++ +S+AG + A E+K
Sbjct: 492 YTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELK 551
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
LG D Y +++ + R R +L+EM+ + + Y L+ S NG+ +
Sbjct: 552 KLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLK 611
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV--AL 350
AQ+V + AG+ P +INAY + G +A F++M+ A P + + L
Sbjct: 612 FAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNIL 671
Query: 351 ILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
I S C K N++ A+ + D++ G + T A FK L +++E V
Sbjct: 672 INSLC-KNNKVKSAVSLMEDMKIWGV---TPNTTTYNAIFKGLRDEKDLEKVF 720
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 106/242 (43%), Gaps = 1/242 (0%)
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMK-RRGFICDQVTLTVMVVMYSKAGNLKM 223
S E ++ Y +I G K + Q + M+ ++G D +T ++ + KAG ++
Sbjct: 378 SVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEK 437
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
+E F+E+ G + + ++V R G + E + + + Y AL+
Sbjct: 438 GKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALIN 497
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
+ N E A +F + +G +PDA + LI+ + AG+ A ++K G+ P
Sbjct: 498 AFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRP 557
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
C ++ + N+ +R E L ++E G TL A+ + G ++ + V+
Sbjct: 558 DTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVM 617
Query: 404 RE 405
R+
Sbjct: 618 RK 619
>gi|410110147|gb|AFV61153.1| pentatricopeptide repeat-containing protein 123, partial [Phyla
nodiflora]
Length = 419
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 104/219 (47%), Gaps = 4/219 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y +I YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 198 KNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDR 257
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ + +M++AY RAG++ + LL E+ + + + +L
Sbjct: 258 AAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDTAIHILA 316
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF +G D + +I+ + F MR G P
Sbjct: 317 G---AGRIEEATYVFRQAIDSGEVKDITVFERMIHLLSKYKKYMNVVEVFDKMRGLGYFP 373
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEA 382
+A++L+A K ++ ++A + ++++ G + E
Sbjct: 374 DSNVIAVVLNAYGKLHEFDKASDIYMEMQEVGCVFSDEV 412
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 101/233 (43%), Gaps = 4/233 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F ++
Sbjct: 102 YSTLLTMYVENXKFLEALSVFSEMREXKCLXDLXTCNIMIDVYGQLGMAKEADKLFWGMR 161
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+G + SY +++ Y A + L R M + + Y +++ Y E
Sbjct: 162 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHE 221
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + +Q GI P++ + +I+ + G+ +A FQ +R +G+E ++
Sbjct: 222 KANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMI 281
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
A E+ + A L +L+R + A LA G +EE +V R+
Sbjct: 282 VAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAG----AGRIEEATYVFRQ 330
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 96/236 (40%), Gaps = 6/236 (2%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+ +GK + A + + MK G + + + ++ MY + A F E++
Sbjct: 67 YNAMINVFGKAKLFREARSLIXEMKTAGVMPXTTSYSTLLTMYVENXKFLEALSVFSEMR 126
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
D + M+ Y + GM + L M + Y LLR Y G++E
Sbjct: 127 EXKCLXDLXTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY---GDAE 183
Query: 293 ---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
A +F +Q I + +I Y + +KA Q M+ G+EP+ +
Sbjct: 184 LFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYS 243
Query: 350 LILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
I+S K +L+RA L G + + T+ ++R G+V + +L E
Sbjct: 244 TIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHE 299
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 70/168 (41%)
Query: 177 IHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGE 236
I +GK+ A + L M+ D V + ++ + K + A F +K G
Sbjct: 1 ITHFGKEGLFDXALSWLQKMEXDXVPGDLVLXSNLIELSRKLCDYSKAISIFSRLKXSGX 60
Query: 237 PLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQR 296
D +Y +M+ + +A + L+ EM V + Y LL Y N A
Sbjct: 61 XPDLXAYNAMINVFGKAKLFREARSLIXEMKTAGVMPXTTSYSTLLTMYVENXKFLEALS 120
Query: 297 VFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
VF ++ D C ++I+ Y G +++A F MRK G+EP+
Sbjct: 121 VFSEMREXKCLXDLXTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 168
>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
Length = 1274
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 95/210 (45%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M++ G+ VT ++ Y K G K A E + +K G D +Y ++ R+
Sbjct: 219 MEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNR 278
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
+ +G +LLR+M + ++ Y L+ G+S G A ++ + G++P+
Sbjct: 279 IAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNA 338
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
LI+ + G ++A F M GL PS+ ++L K + + A F + ++R+G
Sbjct: 339 LIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNG 398
Query: 376 FMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
VG+ + + G ++E +L E
Sbjct: 399 VCVGRITYTGMIDGLCKNGFLDEAVVLLNE 428
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 88/232 (37%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+G+ + ++ A L M G + VT ++ + GN K A + F ++
Sbjct: 301 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME 360
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + SYG ++ + D M V VG Y ++ G NG +
Sbjct: 361 AKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLD 420
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + GI PD + LIN + G+ + A + + GL P+ + ++
Sbjct: 421 EAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 480
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
C + L A+ + +G L + G V E E +R
Sbjct: 481 YNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMR 532
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 104/257 (40%), Gaps = 10/257 (3%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMK---RRGFICDQVTL 208
L+ ++ + ++L +S+ YT +I G +K + A L A + R + ++V
Sbjct: 635 LFGEMVQRSILPDSYT-----YTSLISGLCRKGKTVIA--ILFAKEAEARGNVLPNKVMY 687
Query: 209 TVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
T V KAG K E++ LG D + +M+ Y R G +++ LL EM
Sbjct: 688 TCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGN 747
Query: 269 QEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
Q Y LL GYS + + ++ +I GI PD C L+ + +
Sbjct: 748 QNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEI 807
Query: 329 AYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAA 388
+ G+E +++S C ++N A + + + G + K+ + +
Sbjct: 808 GLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVS 867
Query: 389 WFKRLGVVEEVEHVLRE 405
R +E VL E
Sbjct: 868 VLNRNHRFQESRMVLHE 884
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 67/146 (45%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
++ + +I Y+ +I+G+ K + + A+ + + R G + + + ++ + G LK
Sbjct: 431 KDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLK 490
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A +E + L G D ++ +V + +AG + E +R M + + + + L+
Sbjct: 491 EAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLI 550
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITP 308
GY +G A VF+ + G P
Sbjct: 551 NGYGNSGEGLKAFSVFDEMTKVGHHP 576
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 89/217 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L N + +I G+ + + A M+ +G +V+ V++ K
Sbjct: 324 MLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAE 383
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+A + +K G + + +Y M+ + G LD VLL EM + Y A
Sbjct: 384 FDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSA 443
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G+ G + A+ + I G++P+ + + LI G ++A ++ M G
Sbjct: 444 LINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEG 503
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
+++++ K ++ A EF+ + DG +
Sbjct: 504 HTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 540
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 96/246 (39%), Gaps = 4/246 (1%)
Query: 166 FEANIRD---YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E + RD + ++ K ++ AE + M G + + V+ ++ Y +G
Sbjct: 501 LEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGL 560
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A F+E+ +G +YGS++ + G L E L+ + A V + +Y LL
Sbjct: 561 KAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLL 620
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT-AFQNMRKAGL 341
+GN A +F + I PD+ LI+ G++ A A + + +
Sbjct: 621 TAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNV 680
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEH 401
P+ + K Q + F ++ G + + + R+G +E+
Sbjct: 681 LPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTND 740
Query: 402 VLREYG 407
+L E G
Sbjct: 741 LLPEMG 746
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 79/188 (42%), Gaps = 1/188 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I +I GY + +I+ + L M + + T +++ YSK ++ + +
Sbjct: 718 DIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLY 777
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
I L G DK + S+V+ + ML+ G +L+ + V V + L+ N
Sbjct: 778 RSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCAN 837
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP-SDKC 347
G A + + + GI+ D C +++ + Q++ M K G+ P S K
Sbjct: 838 GEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKY 897
Query: 348 VALILSAC 355
+ LI C
Sbjct: 898 IGLINGLC 905
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 90/243 (37%), Gaps = 35/243 (14%)
Query: 169 NIRDYTKIIHGYGKKMQIQNA---------------------------ENTLLAMK---R 198
N+ Y ++HGY K+ + + E+ +L +
Sbjct: 753 NLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKIL 812
Query: 199 RGFIC-----DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRA 253
+ FIC D+ T +++ G + A + + + LG LDK + +MV R
Sbjct: 813 KAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRN 872
Query: 254 GMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
++L EM Q + S Y L+ G G+ + A V E + I P
Sbjct: 873 HRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAE 932
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
+ ++ A G++ +A + M K L P+ ++ C K + ALE + +
Sbjct: 933 SAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSN 992
Query: 374 DGF 376
G
Sbjct: 993 CGL 995
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/232 (18%), Positives = 92/232 (39%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
+A++ Y +IH + +I L M++R ++VT ++ +S G + +A +
Sbjct: 260 DADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQ 319
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
E+ G + ++ +++ ++ G + M+A+ + Y LL G
Sbjct: 320 LLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLC 379
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
N + A+ + ++ G+ +I+ G +A M K G++P
Sbjct: 380 KNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIV 439
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
+ +++ K + A E + + R G TL R+G ++E
Sbjct: 440 TYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKE 491
>gi|414869157|tpg|DAA47714.1| TPA: hypothetical protein ZEAMMB73_516901 [Zea mays]
Length = 853
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 6/204 (2%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
LY ++ E+ L ++F Y+ +++ GK Q+ A M G + VT +M
Sbjct: 452 LYGRMQEVGLSPDTFT-----YSVMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIM 506
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ + +KA N + + ++++++ G DK +Y ++ G LD E + EM ++
Sbjct: 507 IALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEM-RRDW 565
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
VY L+ + GN + A ++A+ G+ P+ C L++A+ + Q AY
Sbjct: 566 APDEPVYGLLVDLWGKAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAFLKMNRFQDAYI 625
Query: 332 AFQNMRKAGLEPSDKCVALILSAC 355
QNM GL PS + L+LS C
Sbjct: 626 VLQNMLARGLVPSVQTYTLLLSCC 649
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 108/249 (43%), Gaps = 5/249 (2%)
Query: 161 LLEESFEANIR----DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS 216
LL+E A+ + Y +IIH YG+ ++ A M+ G+ D+VT ++ +++
Sbjct: 382 LLDEMSRAHCKPTVVTYNRIIHAYGRANYLKEAVKVFEEMQEAGYEPDRVTYCTLIDIHA 441
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
KAG L +A + + ++ +G D +Y MV + G L L EM
Sbjct: 442 KAGYLDIAMDLYGRMQEVGLSPDTFTYSVMVNCLGKGGQLAAAYKLFCEMIENGCTPNLV 501
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
Y ++ + N E ++++ +Q AG PD ++++ G +A F M
Sbjct: 502 TYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEM 561
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVV 396
R+ P + L++ K +++AL + + +DG +L + F ++
Sbjct: 562 RR-DWAPDEPVYGLLVDLWGKAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAFLKMNRF 620
Query: 397 EEVEHVLRE 405
++ VL+
Sbjct: 621 QDAYIVLQN 629
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 93/228 (40%)
Query: 147 LMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQV 206
L +H + L + + F+ + YT +I G+ Q + L M R V
Sbjct: 337 LHDHTVALGFFQWLKRQPGFKHDGHTYTTMIGILGQARQFGVLKELLDEMSRAHCKPTVV 396
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
T ++ Y +A LK A + FEE++ G D+ +Y +++ + +AG LD L M
Sbjct: 397 TYNRIIHAYGRANYLKEAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRM 456
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
+ + Y ++ G A ++F + G TP+ ++I A
Sbjct: 457 QEVGLSPDTFTYSVMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIMIALQAKARNY 516
Query: 327 QKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
+ +++M+ AG P ++++ L+ A I++ RD
Sbjct: 517 ENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRRD 564
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 85/211 (40%), Gaps = 1/211 (0%)
Query: 196 MKRR-GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG 254
+KR+ GF D T T M+ + +A + +E +E+ +Y ++ AY RA
Sbjct: 350 LKRQPGFKHDGHTYTTMIGILGQARQFGVLKELLDEMSRAHCKPTVVTYNRIIHAYGRAN 409
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
L + EM Y L+ ++ G + A ++ +Q G++PD +
Sbjct: 410 YLKEAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQEVGLSPDTFTYS 469
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
+++N GQ AY F M + G P+ ++++ K ++ D++
Sbjct: 470 VMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVA 529
Query: 375 GFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
GF K + G ++E E V E
Sbjct: 530 GFRPDKITYSIVMEVLGHCGHLDEAEAVFIE 560
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 101/239 (42%), Gaps = 4/239 (1%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLA-MKRRGFICDQVTLTVMVVMYSKAG 219
+L AN Y+ ++ G K ++ A LL + RRGF D VT + ++ KAG
Sbjct: 210 MLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAG 269
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
L+ A + FEE+ + +Y S++ Y RAG +D LL +M Y
Sbjct: 270 RLRDAVDIFEEMSCAPTAI---TYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYT 326
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ + G + A +F+ + ++PD L++ G+ + A + + +
Sbjct: 327 TLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRR 386
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
G P+ ++ K NQ+ +A E + D GF+ L A R G ++
Sbjct: 387 GCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQ 445
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 94/247 (38%), Gaps = 33/247 (13%)
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL 221
+ ++ + YTK++HG K ++++A L M + D TLTV+V +
Sbjct: 141 MNDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRV 200
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL------------------ 263
A E EE+ G + +Y ++V + LD LL
Sbjct: 201 DDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYST 260
Query: 264 ---------REMDAQEVY------VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITP 308
R DA +++ + Y +L+ GY G+ + A R+ + P
Sbjct: 261 VIDGLCKAGRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAP 320
Query: 309 DARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFL 368
D L++A+ G+ AY FQ M L P ++ E ++ ALE L
Sbjct: 321 DVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELL 380
Query: 369 IDLERDG 375
++ R G
Sbjct: 381 EEITRRG 387
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 72/177 (40%), Gaps = 6/177 (3%)
Query: 159 LALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
L LLEE I Y ++ GY K Q++ AE + + RGF+ + VT ++V
Sbjct: 377 LELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAG 436
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRS--YGSMVMAYVRAGMLDRGEVLLREMDAQEVY 272
+AG A + +++ G P Y ++ A R G D EM +
Sbjct: 437 CCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYV 496
Query: 273 VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
+ + ++ + A + E + G TP C +++AY AG QKA
Sbjct: 497 PAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKA 553
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 93/213 (43%), Gaps = 2/213 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ ++ +T ++ G + ++++A L + RRG T +V Y K+
Sbjct: 348 MVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQ 407
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV--Y 278
++ AEE + + G + +Y +V RAG D+ L +++++ + V Y
Sbjct: 408 VRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMY 467
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
+L +G ++ A + +E + G P A A ++ A A Q Q+A+ + M K
Sbjct: 468 AIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIK 527
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDL 371
G P ++SA + + +A E +L
Sbjct: 528 YGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 560
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/209 (18%), Positives = 93/209 (44%), Gaps = 3/209 (1%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLL-AMKRRGFICDQVTLTVMVVMYSKAG 219
+L+ + ++ + ++ G ++++ LL ++ RG D V L ++ A
Sbjct: 1 MLDAGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDAR 60
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ A F+++ LG ++ +Y +++ +A +LD LL +M ++ + G+ ++
Sbjct: 61 DTTTAMALFDKMAELGA-VNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHN 119
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
++ G G A V+ + A PD L++ AG+ + A Q M A
Sbjct: 120 VVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSA 178
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFL 368
P + + +++ + ++++ A E +
Sbjct: 179 RHVPDNTTLTVVVQSLCLGDRVDDARELV 207
>gi|359481811|ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Vitis vinifera]
Length = 848
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 105/249 (42%)
Query: 155 QVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
Q A +L E + NI Y +I Y + A + +K+ GF D V+ T ++
Sbjct: 359 QTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNA 418
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
Y K+G + A + FE ++ + SY +++ AY G+L +L EM+ V
Sbjct: 419 YGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPN 478
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
LL G + V A + GI + I +Y G+ KA + ++
Sbjct: 479 IVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYR 538
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
MR ++P +++S C K ++ AL FL ++ + KE ++ + + G
Sbjct: 539 AMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQG 598
Query: 395 VVEEVEHVL 403
V E E +
Sbjct: 599 QVTEAESMF 607
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 108/257 (42%), Gaps = 14/257 (5%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+ E ++ + ++ Y + Q + MK D TL +++ K G
Sbjct: 258 MTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQ 317
Query: 221 LKMAEETFEEIKLLGEPLDKRS--------YGSMVMAYVRAGMLDRGEVLLREMDAQEVY 272
A + F +K +KRS + +++ Y G ++ + M A+ +
Sbjct: 318 NGKAIDIFNSMK------EKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLK 371
Query: 273 VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTA 332
Y AL+ Y+ +G + A VF I+ G PD L+NAY +G+ +KA
Sbjct: 372 PNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKV 431
Query: 333 FQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKR 392
F+ MR+ +P+ ++ A + L A+E L ++ER+G + CTL A R
Sbjct: 432 FELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGR 491
Query: 393 LGVVEEVEHVLREYGLR 409
G +++ VL LR
Sbjct: 492 CGQKVKIKSVLSAAELR 508
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 122/328 (37%), Gaps = 60/328 (18%)
Query: 115 PETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYT 174
P+ + + LL A+ + KP +A +K +LM + N+ Y
Sbjct: 407 PDVVSYTSLLNAYGKSGKPEKA-----MKVFELMR-------------RNHCKPNLVSYN 448
Query: 175 KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLL 234
+I YG K + A L M+R G + V++ ++ + G + +L
Sbjct: 449 ALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELR 508
Query: 235 GEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY---------------------- 272
G L+ +Y S + +Y+ G D+ L R M ++V
Sbjct: 509 GIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEA 568
Query: 273 -------------VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+ EVY +++ YS G A+ +F ++ G PD +I+A
Sbjct: 569 LGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHA 628
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL---EFL----IDLE 372
Y +A +KA F M ++P + ++ A K Q + L EF+ I
Sbjct: 629 YDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFN 688
Query: 373 RDGFMVGKEASCTLAAWFKRLGVVEEVE 400
F A L W + +G+++ +E
Sbjct: 689 NSSFFEMVSACSLLREWREIIGLIKLME 716
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 55/126 (43%)
Query: 243 YGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQ 302
Y M+ + R ++D+ L EM +E Y AL+ + G A + + +
Sbjct: 165 YNMMIRLHARHNIVDQARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 224
Query: 303 FAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLN 362
A I P LINA +G ++A + M + G+ P ++LSA ++ NQ +
Sbjct: 225 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYS 284
Query: 363 RALEFL 368
+ L +
Sbjct: 285 KVLSYF 290
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 63/139 (45%), Gaps = 1/139 (0%)
Query: 238 LDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG-SEVYKALLRGYSMNGNSEGAQR 296
++++ ++ + G L+ + R M Q+ Y +++Y ++R ++ + + A+
Sbjct: 124 FSRKNFPLLIREITQIGSLEHSVQVFRWMKNQKNYCARNDIYNMMIRLHARHNIVDQARG 183
Query: 297 VFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACE 356
+F +Q PDA LINA+ AGQ + A +M +A + PS +++AC
Sbjct: 184 LFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACG 243
Query: 357 KENQLNRALEFLIDLERDG 375
AL + +G
Sbjct: 244 SSGNWKEALNVCKKMTENG 262
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 30/160 (18%), Positives = 70/160 (43%)
Query: 209 TVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
+M+ ++++ + A F E++ D +Y +++ A+ RAG ++ +M
Sbjct: 166 NMMIRLHARHNIVDQARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLR 225
Query: 269 QEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
+ Y L+ +GN + A V + + G+ PD ++++AY+ Q K
Sbjct: 226 AAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSK 285
Query: 329 AYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFL 368
+ F+ M+ + P + +++ K Q +A++
Sbjct: 286 VLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAIDIF 325
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 78/207 (37%), Gaps = 35/207 (16%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I Y K+ Q+ AE+ MK G D +T T M+ Y A N + A F E++
Sbjct: 587 YSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEME 646
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVL-------------------------LRE-- 265
D + S++ A+ + G + VL LRE
Sbjct: 647 TDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFFEMVSACSLLREWR 706
Query: 266 --------MDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
M+ V + LL +G E ++F I +G + ++L+
Sbjct: 707 EIIGLIKLMEPSISVVSIGLLNQLLHFLGKSGKIETMMKLFYKIVASGAEINFYTYSILL 766
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPS 344
AG +K Q M +AGL+PS
Sbjct: 767 KNLLAAGNWRKYIEVLQWMEEAGLQPS 793
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 41/221 (18%), Positives = 86/221 (38%), Gaps = 3/221 (1%)
Query: 119 NLSDLLAAWV-RFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKII 177
++ LL WV RF + + + Q+ +EH + QV ++++ A Y +I
Sbjct: 112 DVEGLLNRWVGRFSRKNFPLLIREITQIGSLEHSV--QVFRWMKNQKNYCARNDIYNMMI 169
Query: 178 HGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEP 237
+ + + A M++ D T ++ + +AG + A +++ P
Sbjct: 170 RLHARHNIVDQARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIP 229
Query: 238 LDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRV 297
+ +Y +++ A +G + ++M V + +L Y
Sbjct: 230 PSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSY 289
Query: 298 FEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
FE ++ I PD ++I GQ+ KA F +M++
Sbjct: 290 FELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKE 330
>gi|255660918|gb|ACU25628.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 484
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 118/266 (44%), Gaps = 4/266 (1%)
Query: 141 VLKQLKLMEHPL-YLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR 199
VL K EH L + + E + L FE N + KII G+ ++ +A LL M ++
Sbjct: 18 VLHGSKTSEHALQFFRWVERSNL---FEHNRETHLKIIEILGRASKLNHARCILLDMPKK 74
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G D+ +M+ Y KAG ++ + + F++++ LG +SY ++ +R G
Sbjct: 75 GLEWDEDMWVLMIDSYGKAGIVQESVKLFQKMEELGVERTTKSYDTLFKVILRRGRFMMA 134
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+ +M ++ + + ++ G+ ++G E A R F+ ++ I+PD +IN
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFDDMKSREISPDVITYNTMING 194
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
Y + +A F M+ +EP+ ++ +Q++ AL + +++ G
Sbjct: 195 YYRVKKMDEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPN 254
Query: 380 KEASCTLAAWFKRLGVVEEVEHVLRE 405
TL + E VL+E
Sbjct: 255 AITYSTLLPGLCNAEKMSEARSVLKE 280
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 81/187 (43%), Gaps = 5/187 (2%)
Query: 175 KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLL 234
K+I G+ M + N +L+ G + T VM+ + +G ++ A F+++K
Sbjct: 123 KVILRRGRFMMAKRYFNKMLS---EGIEPTRHTFNVMIWGFFLSGKVETANRFFDDMKSR 179
Query: 235 GEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGA 294
D +Y +M+ Y R +D E EM + + Y L++GY + A
Sbjct: 180 EISPDVITYNTMINGYYRVKKMDEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDA 239
Query: 295 QRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV--ALIL 352
R+ E ++ GI P+A + L+ A + +A + + M + P+D + LI
Sbjct: 240 LRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSVLKEMVDKYIAPTDNSIFMRLIS 299
Query: 353 SACEKEN 359
C+ N
Sbjct: 300 GQCKTGN 306
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 1/158 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+GY + ++ AE + MK R VT T ++ Y + A EE+K
Sbjct: 188 YNTMINGYYRVKKMDEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM-DAQEVYVGSEVYKALLRGYSMNGNS 291
G + +Y +++ A + +L+EM D + ++ L+ G GN
Sbjct: 248 GYGIKPNAITYSTLLPGLCNAEKMSEARSVLKEMVDKYIAPTDNSIFMRLISGQCKTGNL 307
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
+ A V +A+ + +A +LI + A Q KA
Sbjct: 308 DAAADVLKAMIRLSVPTEAGHYGVLIENFCKADQHDKA 345
>gi|255660910|gb|ACU25624.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 484
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 113/243 (46%), Gaps = 6/243 (2%)
Query: 141 VLKQLKLMEHPL-YLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR 199
VL K EH L + + E + L FE N + KII G+ ++ +A LL M ++
Sbjct: 18 VLHSAKTSEHALQFFRWVERSNL---FEHNRETHLKIIEILGRASKLNHARCILLDMPKK 74
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G D+ +M+ Y K G ++ + + F++++ LG +SY ++ +R G
Sbjct: 75 GLEWDEDMWVMMIDSYGKQGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRYMMA 134
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+ +M ++ + + L+ G+ ++G E A R FE ++ I+PD +IN
Sbjct: 135 KRYFNKMLSEGIEPTRXTFXVLIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMING 194
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
Y + ++A F M+ +EP+ ++ +Q++ AL + +++ GF +
Sbjct: 195 YYRVKKXEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK--GFGIK 252
Query: 380 KEA 382
A
Sbjct: 253 PNA 255
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 86/202 (42%), Gaps = 8/202 (3%)
Query: 163 EESFEANIRDYT---KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
E E I+ Y K+I G+ M + N +L+ G + T V++ + +G
Sbjct: 108 ELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLS---EGIEPTRXTFXVLIWGFFLSG 164
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A FE++K D +Y +M+ Y R + E EM + + Y
Sbjct: 165 KVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKXEEAEKYFVEMKGRNIEPTVVTYT 224
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L++GY + A R+ E ++ GI P+A + L+ A + +A + + M
Sbjct: 225 TLIKGYVSVDQVDDALRLVEEMKGFGIKPNAIXYSTLLPGLCNAEKMSEARSILKEMMDK 284
Query: 340 GLEPSDKCV--ALILSACEKEN 359
L P+D + LI S C+ N
Sbjct: 285 YLAPTDNSIFMRLITSQCKSGN 306
>gi|410110061|gb|AFV61110.1| pentatricopeptide repeat-containing protein 123, partial
[Acantholippia seriphioides]
Length = 416
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 96/201 (47%), Gaps = 4/201 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y +I YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 215 KNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDR 274
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ + +M++AY RAG++ + LL E+ + + + +L
Sbjct: 275 AAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDTAIHILA 333
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + F MR G P
Sbjct: 334 G---AGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYANVVEVFDKMRGLGYFP 390
Query: 344 SDKCVALILSACEKENQLNRA 364
+AL+L+A K ++ ++A
Sbjct: 391 DSDVIALVLNAYGKLHEFDKA 411
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 102/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + MK G + + + + ++ MY + A
Sbjct: 77 FTPDLVAYNAMINVFGKAKLFREARSLISEMKXSGVMPNTASYSTLLTMYVENKKFLEAL 136
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 137 SVFSEMREVKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 196
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + +I Y + +KA Q M+ G+E
Sbjct: 197 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIE 253
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 254 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRL 313
Query: 403 LRE 405
L E
Sbjct: 314 LHE 316
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 102/237 (43%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 115 NTASYSTLLTMYVENKKFLEALSVFSEMREVKCLLDLTTCNIMIDVYGQLGMAKEADKLF 174
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 175 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKT 234
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G+E
Sbjct: 235 LEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILF 294
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE +V R+
Sbjct: 295 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAG----AGRIEEATYVFRQ 347
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ A + L M++ D V + ++ + K + A F +K
Sbjct: 14 YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 73
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +M+ + +A + L+ EM V + Y LL Y N
Sbjct: 74 RSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKXSGVMPNTASYSTLLTMYVENKKFL 133
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF ++ D C ++I+ Y G +++A F MRK G+EP+
Sbjct: 134 EALSVFSEMREVKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 185
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 30/172 (17%), Positives = 76/172 (44%), Gaps = 2/172 (1%)
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
D+ +Y +++ + + G+ D L++M+ V +Y L+ + A +F
Sbjct: 10 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 69
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
++ +G TPD +IN + A ++A + M+ +G+ P+ + +L+ +
Sbjct: 70 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKXSGVMPNTASYSTLLTMYVEN 129
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRE 410
+ AL ++ ++ + + +LG+ +E + + +G+R+
Sbjct: 130 KKFLEALSVFSEMREVKCLLDLTTCNIMIDVYGQLGMAKEADKLF--WGMRK 179
>gi|410110091|gb|AFV61125.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
micrantha]
Length = 406
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 103/219 (47%), Gaps = 4/219 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y +I YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 185 KNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDR 244
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ + +M++AY RAG++ + LL E+ + + + +L
Sbjct: 245 AAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDTAIHILA 303
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + F MR G P
Sbjct: 304 G---AGRIEEATYVFRQAIDAGEAKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFP 360
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEA 382
+A++L+A K + ++A + ++++ G + E
Sbjct: 361 DSNVIAVVLNAYGKLQEFDKANDVYMEMQEVGCVFSDEV 399
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 102/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + MK G + + + + ++ MY + A
Sbjct: 47 FTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEAL 106
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 107 SVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 166
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + +I Y + +KA Q M+ G+E
Sbjct: 167 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIE 223
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 224 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRL 283
Query: 403 LRE 405
L E
Sbjct: 284 LHE 286
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 102/237 (43%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 85 NTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 144
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 145 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKT 204
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G+E
Sbjct: 205 LEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILF 264
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE +V R+
Sbjct: 265 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAG----AGRIEEATYVFRQ 317
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 60/141 (42%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D V + ++ + K + A F +K G D +Y +M+ + +A + L+
Sbjct: 15 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 74
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
EM V + Y LL Y N A VF ++ D C ++I+ Y
Sbjct: 75 SEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 134
Query: 324 GQSQKAYTAFQNMRKAGLEPS 344
G +++A F MRK G+EP+
Sbjct: 135 GMAKEADKLFWGMRKMGIEPN 155
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 97/236 (41%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
AN+ Y +I+GY K + A M R+ + VT ++ G L+ A
Sbjct: 348 ANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISL 407
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
F E+ G+ D +Y ++ + LD+ LL+ ++ ++Y +L G
Sbjct: 408 FHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCR 467
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G E A+ +F + G+ P+ ++I+ G +A F M K G P+D
Sbjct: 468 AGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCT 527
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
LI + N+ R +E L ++ GF V + L G+ + V+ +L
Sbjct: 528 YNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQIL 583
>gi|297738270|emb|CBI27471.3| unnamed protein product [Vitis vinifera]
Length = 574
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 131/308 (42%), Gaps = 19/308 (6%)
Query: 111 ICVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANI 170
C SP +G+L+ + R +P W +++ + P + +L S N
Sbjct: 59 FCASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNA 118
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
+ ++ ++ + + + GF + T ++ +YSK+G++K A F++
Sbjct: 119 YTFPFLLKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQ 178
Query: 231 I--------------KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
+ + G LD + S + A G+LD+G+ + + E+ +
Sbjct: 179 VDQRDTEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPI 238
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
+ L+ Y+ G+ E A VF ++ G++ + +I+ Y + G+ ++A F M
Sbjct: 239 LGCVLIDMYAKCGDLEEAIEVFRKMEEKGVS----VWTAMISGYAIHGRGREALEWFMKM 294
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER-DGFMVGKEASCTLAAWFKRLGV 395
+ AG+EP+ IL+AC ++ A +ER GF E + R G+
Sbjct: 295 QTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGL 354
Query: 396 VEEVEHVL 403
++E E ++
Sbjct: 355 LKEAEELI 362
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 84/193 (43%), Gaps = 5/193 (2%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E + +T +I GY + + A + M+ G +Q+T T ++ S AG + A+
Sbjct: 265 EKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKL 324
Query: 227 TFEEI-KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
FE + ++ G YG MV RAG+L E L+ M V + ++ ALL
Sbjct: 325 LFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMP---VKPNAAIWGALLNAC 381
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
++GN E +++ + + R L + + AG+ +A + M++ G+
Sbjct: 382 HIHGNLELGKQIGKILIQVDPGHGGRYIH-LASIHAAAGEWNQAARVRRQMKEQGVSKLP 440
Query: 346 KCVALILSACEKE 358
C + ++ E
Sbjct: 441 GCSVISVNGTAHE 453
>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
Length = 676
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 97/211 (45%), Gaps = 2/211 (0%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
E F NI Y II G+ KK +IQ A L +G D+VT T+++ + K G++
Sbjct: 386 EGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITY 445
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A + F ++ D +Y +++ Y + +++ + L + + + + Y +++
Sbjct: 446 ALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIA 505
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
GY G S A +VFE + G PD LI+ + ++A F+ M + P
Sbjct: 506 GYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKESRLEEARALFETMLDKHMVP 565
Query: 344 SD-KCVALILSACEKENQLNRALEFLIDLER 373
D CV L C ++ + A+ FL L++
Sbjct: 566 CDVTCVTLAYEYCRRD-KTTIAVSFLDGLDK 595
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 104/237 (43%), Gaps = 1/237 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+ R + ++ G ++ + + A+ L AM R GF D T TV+V + + G + F
Sbjct: 180 DARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLF 239
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ +G P + +Y + V + G + + +L EM + + + +L+ G
Sbjct: 240 GRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKI 299
Query: 289 GNSEGAQRVF-EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G +E A R+F + ++ + P+ ++I Y G+ +A M + GL P+
Sbjct: 300 GWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNT 359
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
++ + +RA E + ++ +GF+ + F + G +++ VLR
Sbjct: 360 YTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLR 416
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 93/229 (40%), Gaps = 1/229 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E+ N YT +I G+ + A + MK GF+ + T ++ + K G
Sbjct: 348 MVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGK 407
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ A + G DK +Y ++ + + G + L +M + + Y
Sbjct: 408 IQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTT 467
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ Y E +Q++F+ G+ P + +I Y G+S A F+ M + G
Sbjct: 468 IIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHG 527
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAW 389
P ++S KE++L A L + D MV + +C A+
Sbjct: 528 CLPDPITYGALISGLCKESRLEEA-RALFETMLDKHMVPCDVTCVTLAY 575
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 77/197 (39%), Gaps = 2/197 (1%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAM-KRRGFICDQVTLTVMVVMYSKAG 219
++ + + N+ +T +I G K + A L + K + + T TVM+ Y K G
Sbjct: 277 MVGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEG 336
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
L AE + G + +Y +++ + R G DR L+ +M + Y
Sbjct: 337 KLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYN 396
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
A++ G+ G + A +V G+ PD +LI + G A F M +
Sbjct: 397 AIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAEN 456
Query: 340 GLEPS-DKCVALILSAC 355
P D +I C
Sbjct: 457 SCHPDIDTYTTIIAMYC 473
>gi|147772266|emb|CAN67349.1| hypothetical protein VITISV_018089 [Vitis vinifera]
Length = 483
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 111/256 (43%), Gaps = 18/256 (7%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRD 172
+SP L+ ++ A+ ++ K +A + V K+++ M F I
Sbjct: 177 ISPNVYTLNMVMCAFCKWGKLEKA--IEVFKKMETM----------------GFSPTITS 218
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I GY K + + + M++ G D VT ++ + + G L A + F E+K
Sbjct: 219 YNTLIAGYCNKGLLNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMK 278
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ +Y +++ Y + G + G L EM + Y AL+ G M G ++
Sbjct: 279 ANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTK 338
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + + + P++ + LI + S++A+ +++M ++G P+ +++
Sbjct: 339 KAAYLVKELDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLI 398
Query: 353 SACEKENQLNRALEFL 368
S K + A+E +
Sbjct: 399 STFCKNEDFDGAVEVV 414
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 86/190 (45%), Gaps = 5/190 (2%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+ +I+G+ + ++ A MK + + +T ++ YS+ GN +M +E+
Sbjct: 254 FNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEML 313
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y ++++ G + L++E+D + + S + AL+ G + NSE
Sbjct: 314 RNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSE 373
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP-----SDKC 347
A ++++++ +G P+ +LI+ + A + M + + P S+ C
Sbjct: 374 RAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELC 433
Query: 348 VALILSACEK 357
L LS E+
Sbjct: 434 RGLWLSGKEE 443
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 86/208 (41%), Gaps = 2/208 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ ++ + K +++ A M+ GF + ++ Y G L +
Sbjct: 180 NVYTLNMVMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLK 239
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ G D ++ +++ + R G L + EM A +V + Y L+ GYS
Sbjct: 240 ILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQV 299
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP-SDKC 347
GNSE R+ + + GI D LI M G+++KA + + + L P S
Sbjct: 300 GNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTF 359
Query: 348 VALILSACEKENQLNRALEFLIDLERDG 375
ALI C ++N RA + + R G
Sbjct: 360 SALITGQCVRKNS-ERAFQLYKSMIRSG 386
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 81/183 (44%), Gaps = 2/183 (1%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M+R + TL +++ + K G L+ A E F++++ +G SY +++ Y G+
Sbjct: 172 MQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGYCNKGL 231
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
L+ G L M+ V + L+ G+ G A ++F ++ + P+
Sbjct: 232 LNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNT 291
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV-ALILSACEKENQLNRALEFLIDLERD 374
LIN Y G S+ M + G++ ALIL C E + +A + +L+R+
Sbjct: 292 LINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLC-MEGRTKKAAYLVKELDRE 350
Query: 375 GFM 377
+
Sbjct: 351 NLV 353
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 116/261 (44%), Gaps = 8/261 (3%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L++ ++ Y I+HG K+ + A+ M R D TLT+++ + K GN
Sbjct: 436 MLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGN 495
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ A E F+++K LD +Y +++ + + G +D + + +M ++E+ Y
Sbjct: 496 LQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSI 555
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G+ A RV++ + I P +C +I Y +G + + + M G
Sbjct: 556 LVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEG 615
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERD--GFMVGKEASCTLAAWFKRLGVVEE 398
P ++ +E +++A + +E + G + ++ F R ++E
Sbjct: 616 FVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKE 675
Query: 399 VEHVLR---EYGL---RETYS 413
E VLR E G+ R TY+
Sbjct: 676 AEVVLRKMIERGVNPDRSTYT 696
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 79/194 (40%), Gaps = 2/194 (1%)
Query: 147 LMEHPLYLQVAEL--ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICD 204
L +H Y + E+ +L + Y ++ KK + E M+ R + D
Sbjct: 315 LCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPD 374
Query: 205 QVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLR 264
V + M+ +++++GNL A F +K G D Y ++ Y R GM+ L
Sbjct: 375 LVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRN 434
Query: 265 EMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAG 324
EM Q + Y +L G A ++F + + PD+ +LI+ + G
Sbjct: 435 EMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLG 494
Query: 325 QSQKAYTAFQNMRK 338
Q A FQ M++
Sbjct: 495 NLQNAMELFQKMKE 508
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 85/201 (42%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
+ R G + TL +MV K G ++ +++ G D +Y +++ AY G+
Sbjct: 226 ISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL 285
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
++ L+ M + G Y ++ G +G E A+ VF + +G++PD+
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
L+ G + F +MR + P C + ++S + L++AL + ++ G
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 376 FMVGKEASCTLAAWFKRLGVV 396
+ L + R G++
Sbjct: 406 LIPDNVIYTILIQGYCRKGMI 426
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 79/178 (44%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E+ +I Y +I Y K ++ A + AM +GF T ++ K G +
Sbjct: 263 EKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYE 322
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A+E F E+ G D +Y S++M + G + E + +M +++V + +++
Sbjct: 323 RAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMM 382
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ +GN + A F +++ AG+ PD + +LI Y G A M + G
Sbjct: 383 SLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQG 440
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 87/200 (43%), Gaps = 4/200 (2%)
Query: 162 LEESFE---ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
L+ +F +N + +I Y + +++ A ++ +GF ++ +
Sbjct: 154 LDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRI 213
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
G +++A ++EI G ++ + MV A + G +++ L ++ + VY Y
Sbjct: 214 GWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTY 273
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
L+ YS G E A + A+ G +P +IN G+ ++A F M +
Sbjct: 274 NTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLR 333
Query: 339 AGLEPSDKCV-ALILSACEK 357
+GL P +L++ AC+K
Sbjct: 334 SGLSPDSTTYRSLLMEACKK 353
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/326 (19%), Positives = 127/326 (38%), Gaps = 27/326 (8%)
Query: 106 FVKQIICVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQ---VAELALL 162
F+ + IC S + GN +++ +R + P LAV++ L + L L V +L
Sbjct: 53 FLVEKICFSLKQGN-NNVRNHLIR-LNP-----LAVVEVLYRCRNDLTLGQRFVDQLGFH 105
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFIC-----------------DQ 205
+F+ + +IH + ++ +A++ LL M RR + +
Sbjct: 106 FPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSND 165
Query: 206 VTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLRE 265
+++ Y +A L+ A E F ++ G + + +++ + VR G ++ + +E
Sbjct: 166 SVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQE 225
Query: 266 MDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQ 325
+ V + ++ +G E +Q G+ PD LI+AY G
Sbjct: 226 ISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL 285
Query: 326 SQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCT 385
++A+ M G P +++ K + RA E ++ R G +
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345
Query: 386 LAAWFKRLGVVEEVEHVLREYGLRET 411
L + G V E E V + R+
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDV 371
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/246 (18%), Positives = 98/246 (39%), Gaps = 6/246 (2%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
A+ + F + Y +I+G K + + A+ M R G D T +++ K G
Sbjct: 295 AMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG 354
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ E+ F +++ D + SM+ + R+G LD+ + + + + +Y
Sbjct: 355 DVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYT 414
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAY---QMAGQSQKAYTAFQNM 336
L++GY G A + + G D +++ +M G++ K F M
Sbjct: 415 ILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADK---LFNEM 471
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVV 396
+ L P + +++ K L A+E ++ + TL F ++G +
Sbjct: 472 TERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDI 531
Query: 397 EEVEHV 402
+ + +
Sbjct: 532 DTAKEI 537
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/193 (20%), Positives = 85/193 (44%), Gaps = 7/193 (3%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ +++ K +++ L ++ +G D VT ++ YS G + EE F
Sbjct: 234 NVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKG---LMEEAF 290
Query: 229 EEIKLL---GEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
E + + G +Y +++ + G +R + + EM + S Y++LL
Sbjct: 291 ELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEA 350
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
G+ ++VF ++ + PD + +++ + +G KA F ++++AGL P +
Sbjct: 351 CKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN 410
Query: 346 KCVALILSA-CEK 357
+++ C K
Sbjct: 411 VIYTILIQGYCRK 423
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 62/138 (44%), Gaps = 2/138 (1%)
Query: 211 MVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE 270
M+ Y ++GN E E++ G D SY +++ +VR + + L+++M+ ++
Sbjct: 591 MIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQ 650
Query: 271 VYVGSEV--YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
+ +V Y ++L G+ + A+ V + G+ PD +IN + +
Sbjct: 651 GGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTE 710
Query: 329 AYTAFQNMRKAGLEPSDK 346
A+ M + G P DK
Sbjct: 711 AFRIHDEMLQRGFSPDDK 728
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 67/159 (42%), Gaps = 12/159 (7%)
Query: 163 EESFEANIRDYTKI----IHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
+E NI+ I I GY + + E+ L M GF+ D ++ ++ + +
Sbjct: 574 DEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVRE 633
Query: 219 GNLKMAEETFEEIKLLGEPL-----DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYV 273
N+ A F +K + E D +Y S++ + R + EV+LR+M + V
Sbjct: 634 ENMSKA---FGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNP 690
Query: 274 GSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARM 312
Y ++ G+ N A R+ + + G +PD +
Sbjct: 691 DRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDDKF 729
>gi|413934890|gb|AFW69441.1| hypothetical protein ZEAMMB73_914225 [Zea mays]
Length = 504
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 110/244 (45%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+ ++ N R YT ++ Y + +++++ L M+R G D +++V +Y G
Sbjct: 149 MADDGVARNRRTYTLLLGAYARAGRLEDSWWVLGEMRRWGIRLDTAGYSMLVRLYRDNGM 208
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
K A + E++ +G LD + Y ++ + + G L + +M A+ V + A
Sbjct: 209 WKKATDLVMEMQEVGVELDVKIYSGLIDTFGKYGQLADARRMFDKMRAEGVRPDISTWNA 268
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L++ + GN + A R F ++Q G+ PD ++ ++I+ G+ + F M G
Sbjct: 269 LIQWHCRVGNMKRALRFFTSMQEEGMYPDPKIFVMIISRLGEQGKWDEIKKLFDGMNNRG 328
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+ S A+++ + A + + L + + C +A + + G+ E+
Sbjct: 329 FKESGAVYAILVDIYGQYGHFRDAQDCIAALRAENTQLLPRVFCVIANAYAQQGLCEQTV 388
Query: 401 HVLR 404
+VL+
Sbjct: 389 NVLQ 392
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 98/247 (39%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
+ + E E +++ Y+ +I +GK Q+ +A M+ G D T ++ + +
Sbjct: 217 MEMQEVGVELDVKIYSGLIDTFGKYGQLADARRMFDKMRAEGVRPDISTWNALIQWHCRV 276
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
GN+K A F ++ G D + + ++ G D + L M+ + VY
Sbjct: 277 GNMKRALRFFTSMQEEGMYPDPKIFVMIISRLGEQGKWDEIKKLFDGMNNRGFKESGAVY 336
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
L+ Y G+ AQ A++ R+ ++ NAY G ++ Q M +
Sbjct: 337 AILVDIYGQYGHFRDAQDCIAALRAENTQLLPRVFCVIANAYAQQGLCEQTVNVLQLMEE 396
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
G EP+ + +++A + AL ++ G TL F R E+
Sbjct: 397 EGFEPNLVMLNSLINAFGTAGRHLEALAVFQHIKDSGMSPDVVTYTTLMKTFMRAKKFEK 456
Query: 399 VEHVLRE 405
V V RE
Sbjct: 457 VSEVYRE 463
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 85/195 (43%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
++ EE + + + II G++ + + M RGF ++V +Y + G
Sbjct: 288 SMQEEGMYPDPKIFVMIISRLGEQGKWDEIKKLFDGMNNRGFKESGAVYAILVDIYGQYG 347
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ + A++ ++ L R + + AY + G+ ++ +L+ M+ + +
Sbjct: 348 HFRDAQDCIAALRAENTQLLPRVFCVIANAYAQQGLCEQTVNVLQLMEEEGFEPNLVMLN 407
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
+L+ + G A VF+ I+ +G++PD L+ + A + +K ++ M +A
Sbjct: 408 SLINAFGTAGRHLEALAVFQHIKDSGMSPDVVTYTTLMKTFMRAKKFEKVSEVYREMERA 467
Query: 340 GLEPSDKCVALILSA 354
G P K ++ A
Sbjct: 468 GCAPDRKAREMLHDA 482
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 107/257 (41%), Gaps = 18/257 (7%)
Query: 112 CVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIR 171
CV P+ S L+ + + ++A V + LM ++
Sbjct: 299 CVKPDVITYSTLMDGYFLVYEVKKAQH--VFNAMSLM----------------GVTPDVH 340
Query: 172 DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEI 231
YT +I+G+ K + A N M ++ + VT + ++ K+G + + +E+
Sbjct: 341 TYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEM 400
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
+ G+P D +Y S++ + G LDR L +M QE+ + LL G G
Sbjct: 401 RDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRL 460
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALI 351
+ AQ VF+ + G + ++IN + G ++A T M G P+ I
Sbjct: 461 KDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETI 520
Query: 352 LSACEKENQLNRALEFL 368
+ A K+++ ++A + L
Sbjct: 521 IIALFKKDENDKAEKLL 537
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 97/235 (41%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ N+ Y ++ K+ +++ A++ L M + D +T + ++ Y +K
Sbjct: 263 KTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKK 322
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A+ F + L+G D +Y ++ + + M+D L +EM + + G Y +L+
Sbjct: 323 AQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLID 382
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G +G + + ++ G D + LI+ G +A F M+ + P
Sbjct: 383 GLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRP 442
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
+ ++L K +L A E DL G+ + + + G++EE
Sbjct: 443 NIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEE 497
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/176 (19%), Positives = 67/176 (38%), Gaps = 6/176 (3%)
Query: 170 IRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFE 229
I + KI+ + K A + ++ +G D +TL +++ + G +
Sbjct: 59 IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLA 118
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
+I G P D + +++ G + + ++ AQ + Y L+ G G
Sbjct: 119 KILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIG 178
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINA---YQMAGQSQKAYTAFQNMRKAGLE 342
++ A + I PD M +I+A YQ+ + AY F M G+
Sbjct: 179 DTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSE---AYGLFSEMAVKGIS 231
>gi|224104097|ref|XP_002313317.1| predicted protein [Populus trichocarpa]
gi|222849725|gb|EEE87272.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 84/168 (50%), Gaps = 1/168 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I+ + +I YGK + L M++R F VT + + + KAG+++ EE F
Sbjct: 291 DIKTFNILIRSYGKAGMYGKMRSVLEFMEKRFFSPSIVTHNIFIETFGKAGDIETMEEYF 350
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++K LG + +Y S+V AY +AG + + + +LR+++ +V + + + ++ Y
Sbjct: 351 SKMKHLGIKPNTVTYCSLVSAYSKAGHIMKVDSILRQVENSDVILDTPFFNCVISAYGRA 410
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
G+ E +F ++ PD+ A +I AY G + A +NM
Sbjct: 411 GDIEKMSELFLGMEGRKCKPDSITFATMIQAYNAQGMIEAA-QGMENM 457
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 94/218 (43%), Gaps = 3/218 (1%)
Query: 156 VAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGF-ICDQVTLTVMVVM 214
+AE++ L E + Y II GYGK + ENTL M G + D T ++
Sbjct: 209 LAEMSYL--GIECSTVTYNTIIDGYGKAKMFEEMENTLTDMIESGSSVPDLFTFNSIIGA 266
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
Y G + E+ + E +L+G D +++ ++ +Y +AGM + +L M+ +
Sbjct: 267 YGSKGRIDKMEKWYTEFQLMGLRQDIKTFNILIRSYGKAGMYGKMRSVLEFMEKRFFSPS 326
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+ + + G+ E + F ++ GI P+ L++AY AG K + +
Sbjct: 327 IVTHNIFIETFGKAGDIETMEEYFSKMKHLGIKPNTVTYCSLVSAYSKAGHIMKVDSILR 386
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLE 372
+ + + ++SA + + + E + +E
Sbjct: 387 QVENSDVILDTPFFNCVISAYGRAGDIEKMSELFLGME 424
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/284 (20%), Positives = 114/284 (40%), Gaps = 12/284 (4%)
Query: 129 RFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQN 188
+ +PR + +L L P +L + + I YT ++ YGK Q+
Sbjct: 109 HWYEPRTKTYTKLLMMLGKCRQPEEGSFLFEVMLSDGLKPTIDVYTALVSAYGKSGQLDK 168
Query: 189 AENTLLAMKRRGFIC--DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSM 246
A + ++ MK C D T ++++ K ++ E+ LG +Y ++
Sbjct: 169 AFSIVVEMKAIS-ECKPDVYTYSILINCCIKLHRFELIRGILAEMSYLGIECSTVTYNTI 227
Query: 247 VMAYVRAGMLDRGEVLLREMDAQEVYVGSEV-----YKALLRGYSMNGNSEGAQRVFEAI 301
+ Y +A M + E L +M + GS V + +++ Y G + ++ +
Sbjct: 228 IDGYGKAKMFEEMENTLTDM----IESGSSVPDLFTFNSIIGAYGSKGRIDKMEKWYTEF 283
Query: 302 QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQL 361
Q G+ D + +LI +Y AG K + + M K PS + + K +
Sbjct: 284 QLMGLRQDIKTFNILIRSYGKAGMYGKMRSVLEFMEKRFFSPSIVTHNIFIETFGKAGDI 343
Query: 362 NRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
E+ ++ G C+L + + + G + +V+ +LR+
Sbjct: 344 ETMEEYFSKMKHLGIKPNTVTYCSLVSAYSKAGHIMKVDSILRQ 387
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 59/130 (45%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F +I + I +GK I+ E MK G + VT +V YSKAG++ +
Sbjct: 323 FSPSIVTHNIFIETFGKAGDIETMEEYFSKMKHLGIKPNTVTYCSLVSAYSKAGHIMKVD 382
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+++ LD + ++ AY RAG +++ L M+ ++ S + +++ Y
Sbjct: 383 SILRQVENSDVILDTPFFNCVISAYGRAGDIEKMSELFLGMEGRKCKPDSITFATMIQAY 442
Query: 286 SMNGNSEGAQ 295
+ G E AQ
Sbjct: 443 NAQGMIEAAQ 452
>gi|414591144|tpg|DAA41715.1| TPA: hypothetical protein ZEAMMB73_506058 [Zea mays]
Length = 521
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 84/180 (46%)
Query: 181 GKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDK 240
G ++ I + R G + + VT T ++ ++ K G++ A F E+ G
Sbjct: 336 GVELNIYTYNTLACGLCRMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSV 395
Query: 241 RSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEA 300
+Y M+ Y + G + E +EM+ + Y +L+ G+ +NG + A ++FE
Sbjct: 396 LTYSVMIHGYAKKGRIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEE 455
Query: 301 IQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQ 360
++ G P+ LI+ G+S+ A+ + +M KAGL P D + ++ + +N+
Sbjct: 456 MKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLHTDNR 515
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 102/234 (43%), Gaps = 19/234 (8%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E EA + YT ++ I E MK + D T ++ Y +AGN++
Sbjct: 194 NEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMR 253
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A + +E G ++R+YG ++ + + G ++ E+LL +M Q V + ++ ++
Sbjct: 254 RAAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMI 313
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGI-----TPDARMCAL--------------LINAYQMA 323
GY G + A ++ A++ G+ T + C L LI+ +
Sbjct: 314 DGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCRMGVVPNYVTYTTLISIHCKD 373
Query: 324 GQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
G +A F+ M + G PS ++++ K+ ++ A F ++E+ GF+
Sbjct: 374 GDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFV 427
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 99/230 (43%), Gaps = 19/230 (8%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E N R Y +I G+ K Q++ AE L M+ +G +Q+ M+ Y + G + A +
Sbjct: 268 EPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALK 327
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDR--------------GEV-----LLREMD 267
++ +G L+ +Y ++ R G++ G++ L REM
Sbjct: 328 IKAAMEKIGVELNIYTYNTLACGLCRMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMA 387
Query: 268 AQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQ 327
+ Y ++ GY+ G A+R + ++ G PD A L++ + + G+
Sbjct: 388 EKGATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVD 447
Query: 328 KAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
A F+ M++ G EP+ ++S KE + A + D+ + G +
Sbjct: 448 VALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLI 497
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 70/153 (45%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N YT +I + K + A M +G +T +VM+ Y+K G ++ AE
Sbjct: 359 NYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFR 418
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E++ G D +Y S+V + G +D L EM + Y AL+ G +
Sbjct: 419 KEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKE 478
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQ 321
G SE A ++++ + AG+ PD + + L+ +
Sbjct: 479 GRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLH 511
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 92/221 (41%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
++ G K ++ +A L M R G + + ++ Y + + +E E ++ G
Sbjct: 137 VVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEG 196
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
+Y +V + A + + E L EM A V +Y A++ Y GN A
Sbjct: 197 IEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAA 256
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
+V + G+ P+ R +LI + GQ + A +M+ G+ + ++
Sbjct: 257 KVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGY 316
Query: 356 EKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVV 396
++ ++ AL+ +E+ G + TLA R+GVV
Sbjct: 317 CRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCRMGVV 357
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 94/224 (41%), Gaps = 17/224 (7%)
Query: 192 TLLAMKRRGFICDQVTL-----------------TVMVVMYSKAGNLKMAEETFEEIKLL 234
+LL+++R G + D L +V+V K+G + A +++
Sbjct: 101 SLLSLRRAGRLADAAGLLERALGSCPGSVSPFAASVVVDGLCKSGRVDDARRLLDDMPRH 160
Query: 235 GEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGA 294
G L+ Y S++ YVR R + +L M+ + + Y L+ S +
Sbjct: 161 GVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKV 220
Query: 295 QRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSA 354
+ +F ++ + D + +INAY AG ++A G+EP+++ +++
Sbjct: 221 EALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLIKG 280
Query: 355 CEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
K Q+ A L D++ G + + T+ + R G+V++
Sbjct: 281 FCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDD 324
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 69/170 (40%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ Y ++ + L M+ G T T++V S A ++ E F E+K
Sbjct: 169 YNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMK 228
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
D Y +++ AY RAG + R +L E V Y L++G+ G E
Sbjct: 229 ANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLIKGFCKIGQME 288
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
A+ + +Q G+ + + +I+ Y G A M K G+E
Sbjct: 289 AAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKIGVE 338
>gi|125537564|gb|EAY84052.1| hypothetical protein OsI_39281 [Oryza sativa Indica Group]
Length = 762
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 6/204 (2%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
LY ++ E+ L ++F Y+ +++ GK + A M G + VT +M
Sbjct: 458 LYTRMQEVGLSPDTFT-----YSAMVNCLGKGGHLAAAYKLFCEMVENGCTPNLVTYNIM 512
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ + +KA N + + ++++++ G DK +Y ++ G LD E + EM +
Sbjct: 513 IALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMR-HDW 571
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
VY L+ + GN + A + A+ G+ P+ C L++A+ + Q AY+
Sbjct: 572 APDEPVYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAYS 631
Query: 332 AFQNMRKAGLEPSDKCVALILSAC 355
QNM GL PS + L+LS C
Sbjct: 632 VLQNMLAQGLVPSLQTYTLLLSCC 655
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 102/233 (43%), Gaps = 1/233 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +IIH YG+ ++ A M++ G+ D+VT ++ +++K G L++A + + ++
Sbjct: 404 YNRIIHAYGRANYLREAVKVFEEMQKAGYEPDRVTYCTLIDIHAKGGYLEVAMDLYTRMQ 463
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+G D +Y +MV + G L L EM Y ++ + N E
Sbjct: 464 EVGLSPDTFTYSAMVNCLGKGGHLAAAYKLFCEMVENGCTPNLVTYNIMIALQAKARNYE 523
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
++++ +Q AG PD ++++ G +A F MR P + L++
Sbjct: 524 NVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRH-DWAPDEPVYGLLV 582
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
K +++AL + + +DG +L + F ++ ++ VL+
Sbjct: 583 DLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAYSVLQN 635
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 107/263 (40%), Gaps = 13/263 (4%)
Query: 115 PETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLM-EHPLYLQVAELALLEESFEANIRDY 173
P TG++ D L + D + LKL+ +H + L + + F+ + Y
Sbjct: 318 PMTGHVLDNLHC--------KIDAFQANQVLKLLHDHTIALGFFQWLKRQPGFKHDGHSY 369
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKL 233
T +I G+ Q L M VT ++ Y +A L+ A + FEE++
Sbjct: 370 TTMIGILGQARQFGTMRKLLDEMNSVHCKPTVVTYNRIIHAYGRANYLREAVKVFEEMQK 429
Query: 234 LGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV--YKALLRGYSMNGNS 291
G D+ +Y +++ + + G L+ L M QEV + + Y A++ G+
Sbjct: 430 AGYEPDRVTYCTLIDIHAKGGYLEVAMDLYTRM--QEVGLSPDTFTYSAMVNCLGKGGHL 487
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALI 351
A ++F + G TP+ ++I A + +++M+ AG P +++
Sbjct: 488 AAAYKLFCEMVENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKITYSIV 547
Query: 352 LSACEKENQLNRALEFLIDLERD 374
+ L+ A I++ D
Sbjct: 548 MEVLGHCGHLDEAEAVFIEMRHD 570
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 82/211 (38%), Gaps = 1/211 (0%)
Query: 196 MKRR-GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG 254
+KR+ GF D + T M+ + +A + +E+ + +Y ++ AY RA
Sbjct: 356 LKRQPGFKHDGHSYTTMIGILGQARQFGTMRKLLDEMNSVHCKPTVVTYNRIIHAYGRAN 415
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
L + EM Y L+ ++ G E A ++ +Q G++PD +
Sbjct: 416 YLREAVKVFEEMQKAGYEPDRVTYCTLIDIHAKGGYLEVAMDLYTRMQEVGLSPDTFTYS 475
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
++N G AY F M + G P+ ++++ K ++ D++
Sbjct: 476 AMVNCLGKGGHLAAAYKLFCEMVENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVA 535
Query: 375 GFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
GF K + G ++E E V E
Sbjct: 536 GFRPDKITYSIVMEVLGHCGHLDEAEAVFIE 566
>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1136
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 95/210 (45%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M++ G+ VT ++ Y K G K A E + +K G D +Y ++ R+
Sbjct: 259 MEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNR 318
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
+ +G +LLR+M + ++ Y L+ G+S G A ++ + G++P+
Sbjct: 319 IAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNA 378
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
LI+ + G ++A F M GL PS+ ++L K + + A F + ++R+G
Sbjct: 379 LIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNG 438
Query: 376 FMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
VG+ + + G ++E +L E
Sbjct: 439 VCVGRITYTGMIDGLCKNGFLDEAVVLLNE 468
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 88/232 (37%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+G+ + ++ A L M G + VT ++ + GN K A + F ++
Sbjct: 341 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME 400
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + SYG ++ + D M V VG Y ++ G NG +
Sbjct: 401 AKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLD 460
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + GI PD + LIN + G+ + A + + GL P+ + ++
Sbjct: 461 EAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 520
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
C + L A+ + +G L + G V E E +R
Sbjct: 521 YNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMR 572
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 104/257 (40%), Gaps = 10/257 (3%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMK---RRGFICDQVTL 208
L+ ++ + ++L +S+ YT +I G +K + A L A + R + ++V
Sbjct: 675 LFGEMVQRSILPDSYT-----YTSLISGLCRKGKTVIA--ILFAKEAEARGNVLPNKVMY 727
Query: 209 TVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
T V KAG K E++ LG D + +M+ Y R G +++ LL EM
Sbjct: 728 TCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGN 787
Query: 269 QEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
Q Y LL GYS + + ++ +I GI PD C L+ + +
Sbjct: 788 QNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEI 847
Query: 329 AYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAA 388
+ G+E +++S C ++N A + + + G + K+ + +
Sbjct: 848 GLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVS 907
Query: 389 WFKRLGVVEEVEHVLRE 405
R +E VL E
Sbjct: 908 VLNRNHRFQESRMVLHE 924
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 89/217 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L N + +I G+ + + A M+ +G +V+ V++ K
Sbjct: 364 MLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAE 423
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+A + +K G + + +Y M+ + G LD VLL EM + Y A
Sbjct: 424 FDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSA 483
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G+ G + A+ + I G++P+ + + LI G ++A ++ M G
Sbjct: 484 LINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEG 543
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
+++++ K ++ A EF+ + DG +
Sbjct: 544 HTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 580
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 67/146 (45%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
++ + +I Y+ +I+G+ K + + A+ + + R G + + + ++ + G LK
Sbjct: 471 KDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLK 530
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A +E + L G D ++ +V + +AG + E +R M + + + + L+
Sbjct: 531 EAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLI 590
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITP 308
GY +G A VF+ + G P
Sbjct: 591 NGYGNSGEGLKAFSVFDEMTKVGHHP 616
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 96/246 (39%), Gaps = 4/246 (1%)
Query: 166 FEANIRD---YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E + RD + ++ K ++ AE + M G + + V+ ++ Y +G
Sbjct: 541 LEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGL 600
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A F+E+ +G +YGS++ + G L E L+ + A V + +Y LL
Sbjct: 601 KAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLL 660
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT-AFQNMRKAGL 341
+GN A +F + I PD+ LI+ G++ A A + + +
Sbjct: 661 TAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNV 720
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEH 401
P+ + K Q + F ++ G + + + R+G +E+
Sbjct: 721 LPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTND 780
Query: 402 VLREYG 407
+L E G
Sbjct: 781 LLPEMG 786
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 79/188 (42%), Gaps = 1/188 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I +I GY + +I+ + L M + + T +++ YSK ++ + +
Sbjct: 758 DIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLY 817
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
I L G DK + S+V+ + ML+ G +L+ + V V + L+ N
Sbjct: 818 RSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCAN 877
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP-SDKC 347
G A + + + GI+ D C +++ + Q++ M K G+ P S K
Sbjct: 878 GEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKY 937
Query: 348 VALILSAC 355
+ LI C
Sbjct: 938 IGLINGLC 945
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 90/243 (37%), Gaps = 35/243 (14%)
Query: 169 NIRDYTKIIHGYGKKMQIQNA---------------------------ENTLLAMK---R 198
N+ Y ++HGY K+ + + E+ +L +
Sbjct: 793 NLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKIL 852
Query: 199 RGFIC-----DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRA 253
+ FIC D+ T +++ G + A + + + LG LDK + +MV R
Sbjct: 853 KAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRN 912
Query: 254 GMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
++L EM Q + S Y L+ G G+ + A V E + I P
Sbjct: 913 HRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAE 972
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
+ ++ A G++ +A + M K L P+ ++ C K + ALE + +
Sbjct: 973 SAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSN 1032
Query: 374 DGF 376
G
Sbjct: 1033 CGL 1035
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/232 (18%), Positives = 92/232 (39%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
+A++ Y +IH + +I L M++R ++VT ++ +S G + +A +
Sbjct: 300 DADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQ 359
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
E+ G + ++ +++ ++ G + M+A+ + Y LL G
Sbjct: 360 LLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLC 419
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
N + A+ + ++ G+ +I+ G +A M K G++P
Sbjct: 420 KNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIV 479
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
+ +++ K + A E + + R G TL R+G ++E
Sbjct: 480 TYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKE 531
>gi|410110125|gb|AFV61142.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
micromera]
Length = 434
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 103/219 (47%), Gaps = 4/219 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y +I YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 219 KNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKXGKLDR 278
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ + +M++AY RAG++ + LL E+ + + + +L
Sbjct: 279 AAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDTAIHILA 337
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + F MR G P
Sbjct: 338 G---AGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVIEVFDKMRGLGYFP 394
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEA 382
+A++L+A K + ++A + ++++ G + E
Sbjct: 395 DSNVIAVVLNAYGKLQEFDKANDVYMEMQEVGCVFSDEV 433
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 102/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + MK G + + + + ++ MY + A
Sbjct: 81 FTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYXENKKFLEAL 140
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 141 SVFSEMREIKCXLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 200
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + +I Y + +KA Q M+ G+E
Sbjct: 201 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIE 257
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 258 PNSITYSTIISIWGKXGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRL 317
Query: 403 LRE 405
L E
Sbjct: 318 LHE 320
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 101/237 (42%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ D T +M+ +Y + G K A++ F
Sbjct: 119 NTTSYSTLLTMYXENKKFLEALSVFSEMREIKCXLDLTTCNIMIDVYGQLGMAKEADKLF 178
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 179 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKT 238
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G+E
Sbjct: 239 LEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKXGKLDRAAMLFQKLRSSGVEIDQILF 298
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE +V R+
Sbjct: 299 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAG----AGRIEEATYVFRQ 351
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ A + L M++ D V + ++ + K + A F +K
Sbjct: 18 YSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKXCDYSKAISIFSRLK 77
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +M+ + +A + L+ EM V + Y LL Y N
Sbjct: 78 RSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYXENKKFL 137
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF ++ D C ++I+ Y G +++A F MRK G+EP+
Sbjct: 138 EALSVFSEMREIKCXLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 189
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 33/183 (18%), Positives = 81/183 (44%), Gaps = 2/183 (1%)
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
F+E++ D+ +Y +++ + + G+ D L++M+ +V +Y L+
Sbjct: 3 FDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRK 62
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
+ A +F ++ +G TPD +IN + A ++A + M+ AG+ P+
Sbjct: 63 XCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTS 122
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYG 407
+ +L+ + + AL ++ + + + +LG+ +E + + +G
Sbjct: 123 YSTLLTMYXENKKFLEALSVFSEMREIKCXLDLTTCNIMIDVYGQLGMAKEADKLF--WG 180
Query: 408 LRE 410
+R+
Sbjct: 181 MRK 183
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 83/187 (44%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y +I+G+GK + A + M + G D + T++V G + A F
Sbjct: 927 NCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYF 986
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
EE+KL G D SY M+ ++ L+ L EM + + Y AL+ +
Sbjct: 987 EELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNA 1046
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A ++FE +QF G+ P+ LI + +G +A++ F+ M G P+
Sbjct: 1047 GMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTF 1106
Query: 349 ALILSAC 355
A + + C
Sbjct: 1107 AQLPNKC 1113
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 97/237 (40%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
NI Y ++ +GK +I M RG + +T +++ K+ ++ A + +
Sbjct: 822 NIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLY 881
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
EI +YG ++ ++AG + + EM + +Y L+ G+
Sbjct: 882 YEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKA 941
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
GN A +F+ + GI PD + +L+ M G+ A F+ ++ GL+P
Sbjct: 942 GNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSY 1001
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
L+++ K +L AL +++ G L F G+V++ + E
Sbjct: 1002 NLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEE 1058
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 78/158 (49%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++E +++ YT ++ ++ +A + +K G D V+ +M+ K+
Sbjct: 954 MIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRR 1013
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ A F E+K G + +Y ++++ + AGM+D+ + E+ + Y A
Sbjct: 1014 LEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNA 1073
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLIN 318
L+RG+S +GN + A VF+ + G +P+A A L N
Sbjct: 1074 LIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQLPN 1111
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 104/252 (41%), Gaps = 6/252 (2%)
Query: 159 LALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
+ LLEE NI YT I G+ +I +A L M+ G D VT TV++
Sbjct: 247 MDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDA 306
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
AG L A+E + +++ D +Y +++ + G L+ + EM+A
Sbjct: 307 LCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPD 366
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
Y L+ +G + A + + ++ GI P+ LI+ + +A F
Sbjct: 367 VVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFN 426
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAW-FKRL 393
NM G+ P+ L + K +AL+ +++ G M A+C + + +
Sbjct: 427 NMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIM-PSIAACNASLYSLAEM 485
Query: 394 GVVEEVEHVLRE 405
G + E + + +
Sbjct: 486 GRIREAKDIFND 497
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 85/196 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y I YGK + A +T MK+RG + + ++ G ++ A++ F +I
Sbjct: 440 YVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIH 499
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y M+ Y +AG +D+ LL EM ++ V +L+ G +
Sbjct: 500 NCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVD 559
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A ++F ++ + P +LI G+ KA F +M+++G P+ +L
Sbjct: 560 EAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALL 619
Query: 353 SACEKENQLNRALEFL 368
K + ++ AL+
Sbjct: 620 DCLCKNDAVDLALKMF 635
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 100/234 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ E + +++ Y+ ++ G++ + L M+ G + T T+ + + +AG
Sbjct: 218 MISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGR 277
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + ++ G D +Y ++ A AG LD+ + L +M A Y
Sbjct: 278 IDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYIT 337
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ + G+ E +R + ++ G PD +L+ A +G+ +A+ MR G
Sbjct: 338 LMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRG 397
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
+ P+ ++S +L+ ALE ++E G + ++ +LG
Sbjct: 398 IVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLG 451
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/243 (19%), Positives = 98/243 (40%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+E ++ YT +I ++ A+ M+ D VT ++ + G+L+
Sbjct: 290 DEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLE 349
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
+ + E++ G D +Y +V A ++G +D+ +L M + + Y L+
Sbjct: 350 TVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLI 409
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G + A +F ++ G+ P A L I+ Y G +KA F+ M+K G+
Sbjct: 410 SGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIM 469
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
PS L + + ++ A + D+ G + + + G +++ +
Sbjct: 470 PSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKL 529
Query: 403 LRE 405
L E
Sbjct: 530 LTE 532
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 79/201 (39%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ + ++ YT ++ K ++ A + L M+ RG + + T ++ L
Sbjct: 361 DGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDE 420
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A E F ++ LG SY + Y + G ++ +M + + A L
Sbjct: 421 ALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLY 480
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
+ G A+ +F I G++PD+ +++ Y AGQ KA M G EP
Sbjct: 481 SLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEP 540
Query: 344 SDKCVALILSACEKENQLNRA 364
V ++ K +++ A
Sbjct: 541 DIIVVNSLIDTLYKAGRVDEA 561
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/207 (19%), Positives = 87/207 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I G ++ A M+ G + + + Y K G+ + A +TF
Sbjct: 401 NLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTF 460
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++K G + + + + G + + + ++ + S Y +++ YS
Sbjct: 461 EKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKA 520
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A ++ + G PD + LI+ AG+ +A+ F ++ L P+
Sbjct: 521 GQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTY 580
Query: 349 ALILSACEKENQLNRALEFLIDLERDG 375
++++ KE +L +AL+ ++ G
Sbjct: 581 NILITGLGKEGKLLKALDLFGSMKESG 607
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 80/184 (43%)
Query: 193 LLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVR 252
+ MK G + T +++ + K+ + E + E+ G + ++ ++ A V+
Sbjct: 811 FVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVK 870
Query: 253 AGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARM 312
+ +++ L E+ + + Y L+ G G SE A ++FE + P+ +
Sbjct: 871 SNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAI 930
Query: 313 CALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLE 372
+LIN + AG A F+ M K G+ P K +++ +++ A+ + +L+
Sbjct: 931 YNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELK 990
Query: 373 RDGF 376
G
Sbjct: 991 LTGL 994
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 67/157 (42%)
Query: 209 TVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
+++ + KAGN+ +A + F+ + G D +SY +V G +D E+
Sbjct: 932 NILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKL 991
Query: 269 QEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
+ + Y ++ G + E A +F ++ GI+P+ LI + AG +
Sbjct: 992 TGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQ 1051
Query: 329 AYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
A F+ ++ GLEP+ ++ K +RA
Sbjct: 1052 AGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAF 1088
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
E Y L+ G +E A ++F ++ AG P+ LL++A+ + + + + +
Sbjct: 789 ESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNE 848
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCT---LAAWFKR 392
M G +P+ +I+SA K N +N+AL+ ++ F CT L +
Sbjct: 849 MLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDF---SPTPCTYGPLIGGLLK 905
Query: 393 LGVVEEVEHVLRE 405
G EE + E
Sbjct: 906 AGRSEEAMKIFEE 918
Score = 38.1 bits (87), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 40/199 (20%), Positives = 77/199 (38%), Gaps = 1/199 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ Y K QI A L M G D + + ++ KAG + A + F +K
Sbjct: 510 YNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLK 569
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
L +Y ++ + G L + L M + + ALL N +
Sbjct: 570 DLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVD 629
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A ++F + +PD +I G++ A+ + M+K L P + +L
Sbjct: 630 LALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKF-LSPDHVTLYTLL 688
Query: 353 SACEKENQLNRALEFLIDL 371
K+ ++ A++ +++
Sbjct: 689 PGVVKDGRVEDAIKIVMEF 707
>gi|302831506|ref|XP_002947318.1| hypothetical protein VOLCADRAFT_57174 [Volvox carteri f. nagariensis]
gi|300267182|gb|EFJ51366.1| hypothetical protein VOLCADRAFT_57174 [Volvox carteri f. nagariensis]
Length = 1097
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 86/176 (48%), Gaps = 6/176 (3%)
Query: 202 ICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEV 261
+ ++V +++ Y +AG + A LG + Y + + A +AG L+ E
Sbjct: 879 LLNEVVCGALMLAYERAGKWQEAVGVLLRAMNLGITPNTVMYNTAISAAGKAGQLEIAEK 938
Query: 262 LLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITP-DARMCALLINAY 320
L ++ + ++ ++ Y M G + A+ VF A+ AG+ P D C L I A+
Sbjct: 939 LYSKVRQPDTVT----HETMIAAYGMAGLPDRAEAVFSALTAAGLRPRDFAFCGL-IAAH 993
Query: 321 QMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+AG + A MR+AG++PS +L+ACE+ Q ++ALE L + RDG
Sbjct: 994 SLAGDWEGAMRVRTRMRRAGVQPSADVYNALLAACERAGQPDKALELLGAMRRDGV 1049
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 4/165 (2%)
Query: 180 YGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLD 239
Y + + Q A LL G + V + KAG L++AE+ + +++ +P D
Sbjct: 892 YERAGKWQEAVGVLLRAMNLGITPNTVMYNTAISAAGKAGQLEIAEKLYSKVR---QP-D 947
Query: 240 KRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFE 299
++ +M+ AY AG+ DR E + + A + + L+ +S+ G+ EGA RV
Sbjct: 948 TVTHETMIAAYGMAGLPDRAEAVFSALTAAGLRPRDFAFCGLIAAHSLAGDWEGAMRVRT 1007
Query: 300 AIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
++ AG+ P A + L+ A + AGQ KA MR+ G+EP+
Sbjct: 1008 RMRRAGVQPSADVYNALLAACERAGQPDKALELLGAMRRDGVEPN 1052
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 59/148 (39%), Gaps = 4/148 (2%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y I GK Q++ AE +++ D VT M+ Y AG AE F
Sbjct: 916 NTVMYNTAISAAGKAGQLEIAEKLYSKVRQP----DTVTHETMIAAYGMAGLPDRAEAVF 971
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ G ++ ++ A+ AG + + M V ++VY ALL
Sbjct: 972 SALTAAGLRPRDFAFCGLIAAHSLAGDWEGAMRVRTRMRRAGVQPSADVYNALLAACERA 1031
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALL 316
G + A + A++ G+ P+A LL
Sbjct: 1032 GQPDKALELLGAMRRDGVEPNALTGQLL 1059
Score = 38.1 bits (87), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 63/155 (40%), Gaps = 1/155 (0%)
Query: 241 RSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF-E 299
+Y + + A G R + +M A + A + + G+ A +F E
Sbjct: 399 HAYTAAMRAATEGGRWYRALDIWADMRASGCEPTGHAFSAAISACAPAGDWSRAVALFDE 458
Query: 300 AIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKEN 359
AGI PD C LI A G++ +A M G+ P+ + +++A
Sbjct: 459 MTGPAGIRPDVVSCTALITALASGGEADRAEAVVAWMLANGVRPNARTYTALMAALGNAK 518
Query: 360 QLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
+ +RA+E L ++ + + + T +A K LG
Sbjct: 519 RWSRAVEVLGRMQTPEWGGVQPNAYTYSALLKSLG 553
>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
Length = 1153
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 92/205 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y I+ GK M+I+ M R+G+ VT ++ K+ L+ A + + +
Sbjct: 811 YNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLM 870
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G +YG ++ ++AG + E L EM +Y LL G+ + GN+E
Sbjct: 871 SEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTE 930
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
++FE + GI PD + +LI+ AG+ + F+ + + GLEP L++
Sbjct: 931 NVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLI 990
Query: 353 SACEKENQLNRALEFLIDLERDGFM 377
K ++ A+ ++++ G +
Sbjct: 991 DGLGKSERIEEAVCLFNEMKKKGIV 1015
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 82/181 (45%)
Query: 195 AMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG 254
AM G+ + V+ T +V + G L A F+E+K G ++ SY S++ +++A
Sbjct: 343 AMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKAD 402
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
M DR L M+A + + Y +G S A + +E ++ GI PD
Sbjct: 403 MFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAAN 462
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
++++ +G+ A F ++ G+ P +++ C K ++ + A+ F D+
Sbjct: 463 AVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVET 522
Query: 375 G 375
G
Sbjct: 523 G 523
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 124/305 (40%), Gaps = 11/305 (3%)
Query: 107 VKQIICVSPETGNLSDLLAAWVRF----MKPRRADWLAVLKQLKLMEHPLYLQVAEL--A 160
V Q++C + G LSD + + KP R ++ +L K + V E+ A
Sbjct: 289 VIQVLC---DAGRLSDAKDVFWKMKASDQKPDRVTYITLLD--KCGDSGDSQSVMEIWNA 343
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + + NI YT ++ + ++ A MK +G +Q + ++ + KA
Sbjct: 344 MVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADM 403
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A E F + G + ++ + Y ++G + M ++ + A
Sbjct: 404 FDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANA 463
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+L + +G A+RVF ++ G++PD ++I A ++ +A F +M + G
Sbjct: 464 VLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETG 523
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
P + ++ K + N A + L+ TL + R G V+EV
Sbjct: 524 CVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVM 583
Query: 401 HVLRE 405
H+L E
Sbjct: 584 HLLEE 588
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 94/242 (38%), Gaps = 35/242 (14%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ YT I G+ + A L M+ G D VT TV++ + AG L A++ F
Sbjct: 247 NVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVF 306
Query: 229 EEIKLLGEPLDKR-----------------------------------SYGSMVMAYVRA 253
++K + D+ SY ++V A +
Sbjct: 307 WKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQV 366
Query: 254 GMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
G LD + EM + + Y +L+ G+ + A +F + G +P+
Sbjct: 367 GRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTH 426
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
L IN Y +GQS KA +++M+ G+ P +LS+ + +L A +L+
Sbjct: 427 VLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKD 486
Query: 374 DG 375
G
Sbjct: 487 MG 488
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/209 (19%), Positives = 89/209 (42%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
A++E+ ++R Y+ ++ +GKK + L M+ RG + + T+ + + +A
Sbjct: 203 AMVEDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAA 262
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
A + +++ G D ++ ++ AG L + + +M A + Y
Sbjct: 263 RFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYI 322
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
LL +G+S+ ++ A+ G + +++A G+ +A F M++
Sbjct: 323 TLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEK 382
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFL 368
G+ P ++S K + +RALE
Sbjct: 383 GISPEQYSYNSLISGFLKADMFDRALELF 411
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 70/159 (44%), Gaps = 5/159 (3%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
LLE E ++ Y +I G GK +I+ A MK++G + + T +++ KAG
Sbjct: 974 LLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGK 1033
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A + +EE+ + G + +Y +++ Y +G D V VG + A
Sbjct: 1034 ASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTDNAYAAY-----DCVAVGVSLKTA 1088
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
L+ G A+ +F ++ G PD L+++A
Sbjct: 1089 LISGLVDENLINIAEGLFAEMKRRGCGPDQFTYNLILDA 1127
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 41/210 (19%), Positives = 84/210 (40%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
+AN+ + + G G + +++A L M+ G + T ++ K+G A E
Sbjct: 140 KANVGTFATVFSGVGVQGGLRSAPVALPVMREAGMSLNGYTYNGLIYFLVKSGFDAEAME 199
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
++ + G R+Y +++++ + +D LL EM+A+ V Y +R
Sbjct: 200 VYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLG 259
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
+ A ++ ++ +G PD ++I AG+ A F M+ + +P
Sbjct: 260 QAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQKPDRV 319
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGF 376
+L C +E + DG+
Sbjct: 320 TYITLLDKCGDSGDSQSVMEIWNAMVADGY 349
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/222 (18%), Positives = 86/222 (38%), Gaps = 3/222 (1%)
Query: 189 AENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVM 248
A+ +K G D +T T+M+ SKA A F ++ G D + S++
Sbjct: 477 AKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLID 536
Query: 249 AYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITP 308
+ G + L ++ ++ + Y LL G G + + E + + P
Sbjct: 537 TLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPP 596
Query: 309 DARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFL 368
+ +++ G+ A +M + G P ++ KE + A
Sbjct: 597 NLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMF 656
Query: 369 IDLERDGFMVGKEAS-CTLAAWFKRLGVVEEVEHVLREYGLR 409
+++ + A+ CT+ F + G+++E H ++EY L+
Sbjct: 657 CQMKK--ILAPDYATLCTILPSFVKNGLMKEALHTVKEYILK 696
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 78/184 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L+ E F Y ++ G K ++ +AEN M G + +++ + AGN
Sbjct: 869 LMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGN 928
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ + FE++ G D +SY ++ AG L+ G R++ + +Y
Sbjct: 929 TENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNL 988
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G + E A +F ++ GI P+ LI AG++ +A ++ + G
Sbjct: 989 LIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKG 1048
Query: 341 LEPS 344
+P+
Sbjct: 1049 WKPN 1052
>gi|410110077|gb|AFV61118.1| pentatricopeptide repeat-containing protein 123, partial
[Coelocarpum swinglei]
Length = 440
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 103/219 (47%), Gaps = 4/219 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 219 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKIGKLDR 278
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ + +M+ AY RAG++ + LL E+ + + + +L
Sbjct: 279 AAMLFQKLRTSGVEIDQILFQTMIXAYERAGLVAHAKRLLHELKRPD-NIPRDTAIHILA 337
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + + F M G P
Sbjct: 338 G---AGRIEEATYVFRQAIDAGEVKDITVFERMIHLFSKYKKYANVVEVFDKMYGLGYFP 394
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEA 382
+AL+L+A K ++ ++A E ++++ G + E
Sbjct: 395 DSNVIALVLNAYGKLHEFDKANEVYMEMQDVGCVFSDEV 433
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 102/237 (43%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 119 NASSYSALLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 178
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 179 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 238
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G+E
Sbjct: 239 LEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKIGKLDRAAMLFQKLRTSGVEIDQILF 298
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE +V R+
Sbjct: 299 QTMIXAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAG----AGRIEEATYVFRQ 351
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 103/243 (42%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK ++A + + M+ G + + + + ++ MY + A
Sbjct: 81 FTPDLVAYNAMINVFGKAKLFRDARSLISEMRTAGVMPNASSYSALLTMYVENKKFLEAL 140
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 141 SVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 200
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + ++ Y + +KA Q M+ G+E
Sbjct: 201 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIE 257
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 258 PNSITYSTIISIWGKIGKLDRAAMLFQKLRTSGVEIDQILFQTMIXAYERAGLVAHAKRL 317
Query: 403 LRE 405
L E
Sbjct: 318 LHE 320
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 75/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ A + L M++ D V + ++ + K + A F +K
Sbjct: 18 YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 77
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +M+ + +A + L+ EM V + Y ALL Y N
Sbjct: 78 RSGFTPDLVAYNAMINVFGKAKLFRDARSLISEMRTAGVMPNASSYSALLTMYVENKKFL 137
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF ++ D C ++I+ Y G +++A F MRK G+EP+
Sbjct: 138 EALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 189
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/183 (18%), Positives = 80/183 (43%), Gaps = 2/183 (1%)
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
F+E++ D+ +Y +++ + + G+ D L++M+ V +Y L+
Sbjct: 3 FDEMREKALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRK 62
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
+ A +F ++ +G TPD +IN + A + A + MR AG+ P+
Sbjct: 63 LCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFRDARSLISEMRTAGVMPNASS 122
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYG 407
+ +L+ + + AL ++ ++ + + +LG+ +E + + +G
Sbjct: 123 YSALLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF--WG 180
Query: 408 LRE 410
+R+
Sbjct: 181 MRK 183
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 107/257 (41%), Gaps = 18/257 (7%)
Query: 112 CVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIR 171
CV P+ S L+ + + ++A V + LM ++
Sbjct: 299 CVKPDVITYSTLMDGYFLVYEVKKAQH--VFNAMSLM----------------GVTPDVH 340
Query: 172 DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEI 231
YT +I+G+ K + A N M ++ + VT + ++ K+G + + +E+
Sbjct: 341 TYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEM 400
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
+ G+P D +Y S++ + G LDR L +M QE+ + LL G G
Sbjct: 401 RDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRL 460
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALI 351
+ AQ VF+ + G + ++IN + G ++A T M G P+ I
Sbjct: 461 KDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETI 520
Query: 352 LSACEKENQLNRALEFL 368
+ A K+++ ++A + L
Sbjct: 521 IIALFKKDENDKAEKLL 537
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 97/235 (41%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ N+ Y ++ K+ +++ A++ L M + D +T + ++ Y +K
Sbjct: 263 KTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKK 322
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A+ F + L+G D +Y ++ + + M+D L +EM + + G Y +L+
Sbjct: 323 AQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLID 382
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G +G + + ++ G D + LI+ G +A F M+ + P
Sbjct: 383 GLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRP 442
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
+ ++L K +L A E DL G+ + + + G++EE
Sbjct: 443 NIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEE 497
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 39/202 (19%), Positives = 79/202 (39%), Gaps = 6/202 (2%)
Query: 170 IRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFE 229
I + KI+ + K A + ++ +G D +TL +++ + G +
Sbjct: 59 IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLA 118
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
+I G P D + +++ G + + ++ AQ + Y L+ G G
Sbjct: 119 KILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIG 178
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINA---YQMAGQSQKAYTAFQNMRKAGLEPSDK 346
++ GA ++ I P+ M + +I+A YQ+ + AY F M G+
Sbjct: 179 DTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSE---AYGLFSEMTVKGISADVV 235
Query: 347 CVALILSACEKENQLNRALEFL 368
+ ++ E +L A+ L
Sbjct: 236 TYSTLIYGFCIEGKLKEAIGLL 257
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 91/204 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+T ++ G+ +K + A N M++RG D VT T ++ +AG LK AE +E++
Sbjct: 358 FTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEME 417
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G +D +Y ++ Y + G + ++ +M + V Y AL G G+
Sbjct: 418 DKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVC 477
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + G+ + LIN AG ++A +M +AGL+P I+
Sbjct: 478 AANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTII 537
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
A + +L+RA L ++ G
Sbjct: 538 GALCQSKELDRAHSLLQEMLDKGI 561
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 94/216 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++++ N+ YT + G K+ + A L M +G + T ++ KAGN
Sbjct: 451 MVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGN 510
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ A T ++ G D +Y +++ A ++ LDR LL+EM + + Y
Sbjct: 511 LEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNV 570
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G+ M+G EG +R+ E + I P+ L+ Y + + ++ M
Sbjct: 571 LMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+ P++ +++ K + AL F ++ GF
Sbjct: 631 VVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGF 666
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 88/211 (41%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
E N YT +I + Q+ +A + M G + D T ++ + + G+L A
Sbjct: 316 LELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAAR 375
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F+E++ G D +Y +++ RAG L E +L+EM+ + + V + Y L+ GY
Sbjct: 376 NWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGY 435
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
G A V + +TP+ L + G A M GLE +
Sbjct: 436 CKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNI 495
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGF 376
+++ K L +A+ +ID++ G
Sbjct: 496 FTYNSLINGLCKAGNLEQAMRTMIDMDEAGL 526
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 106/256 (41%), Gaps = 6/256 (2%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y ++HGY +++ A L M RG + V T ++ + G + A
Sbjct: 284 DVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVV 343
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++ + G LD + +++ + R G L EM + + Y AL+ G
Sbjct: 344 EDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRA 403
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A+RV + ++ G+ DA +LI+ Y G+ +A+ M + + P+
Sbjct: 404 GELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTY 463
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV---LRE 405
+ K+ + A E L ++ G + +L + G +E+ + E
Sbjct: 464 TALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDE 523
Query: 406 YGLRE---TYSKIPGS 418
GL+ TY+ I G+
Sbjct: 524 AGLKPDVYTYTTIIGA 539
>gi|302757495|ref|XP_002962171.1| hypothetical protein SELMODRAFT_77736 [Selaginella moellendorffii]
gi|300170830|gb|EFJ37431.1| hypothetical protein SELMODRAFT_77736 [Selaginella moellendorffii]
Length = 731
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 2/184 (1%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L EA++ Y+ +++ Y + + A+ TL ++K GF+ D + T M+ +YS G
Sbjct: 534 MLASGVEADVICYSALLNAYAEAGFAREAQQTLDSLKAAGFVPDTIVYTSMMKLYSNLGL 593
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
AE+ +EEI L D + +M+ Y+++GM E L R M + +
Sbjct: 594 TAEAEKIYEEISRLSP--DVFAANTMLNLYIKSGMFTEAEQLFRAMQRGKPGLNEVACTM 651
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+L+ Y G E V + + DAR +I Y AG ++A A + MR+AG
Sbjct: 652 MLKLYREAGKIEQGLDVARVMSRRFLITDARAFNGVIAMYVKAGLMREALEALKEMRRAG 711
Query: 341 LEPS 344
L PS
Sbjct: 712 LVPS 715
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 110/240 (45%), Gaps = 8/240 (3%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y +I Y K +++ L M+ G DQVT ++ Y+ + AE
Sbjct: 299 DVATYNSLIEMYVKNDKLELVSGCLERMRDSGVSPDQVTFRTLISAYAANNVVWKAEALV 358
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV--YKALLRGYS 286
+E++ G +D+ Y M+ YVRA + + E + R + ++ G EV Y ++ Y+
Sbjct: 359 QEMEGSGFFIDQAMYTVMIAMYVRARDVSKAESVFRFLHSRG---GLEVSTYVGVMDVYA 415
Query: 287 MNGNSEGAQRVFEAIQFAGI-TPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
+ + A+ VFE + AG+ TP + +++ AY + A T F+ M K G P++
Sbjct: 416 EHKCLDQAREVFELAKNAGLKTPS--LYNVMMKAYGACDRFTDAVTVFEAMEKDGASPNE 473
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ K L L+ ++ GF + ++ +++ +G V E E V +E
Sbjct: 474 ASFNSLIQLLCKGRLLEILQRVLVLVKAAGFKPSLASCSSVVSFYGDMGRVREAERVFKE 533
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 104/237 (43%), Gaps = 2/237 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N + +I K ++ + L+ +K GF + + +V Y G ++ AE F
Sbjct: 472 NEASFNSLIQLLCKGRLLEILQRVLVLVKAAGFKPSLASCSSVVSFYGDMGRVREAERVF 531
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+ G D Y +++ AY AG + L + A + VY ++++ YS
Sbjct: 532 KEMLASGVEADVICYSALLNAYAEAGFAREAQQTLDSLKAAGFVPDTIVYTSMMKLYSNL 591
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A++++E I + ++PD ++N Y +G +A F+ M++ ++
Sbjct: 592 GLTAEAEKIYEEI--SRLSPDVFAANTMLNLYIKSGMFTEAEQLFRAMQRGKPGLNEVAC 649
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++L + ++ + L+ + R + A + A + + G++ E L+E
Sbjct: 650 TMMLKLYREAGKIEQGLDVARVMSRRFLITDARAFNGVIAMYVKAGLMREALEALKE 706
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 101/232 (43%), Gaps = 6/232 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F+ ++ + ++ YG +++ AE M G D + + ++ Y++AG + A+
Sbjct: 504 FKPSLASCSSVVSFYGDMGRVREAERVFKEMLASGVEADVICYSALLNAYAEAGFAREAQ 563
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA--LLR 283
+T + +K G D Y SM+ Y G+ E + E+ + +V+ A +L
Sbjct: 564 QTLDSLKAAGFVPDTIVYTSMMKLYSNLGLTAEAEKIYEEISR----LSPDVFAANTMLN 619
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
Y +G A+++F A+Q + C +++ Y+ AG+ ++ + M + L
Sbjct: 620 LYIKSGMFTEAEQLFRAMQRGKPGLNEVACTMMLKLYREAGKIEQGLDVARVMSRRFLIT 679
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGV 395
+ +++ K + ALE L ++ R G + + +R G+
Sbjct: 680 DARAFNGVIAMYVKAGLMREALEALKEMRRAGLVPSRSTFSCFEEILERAGM 731
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 75/178 (42%), Gaps = 2/178 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N + +I YG+ + A M + G VT M+ +Y KAG + AE
Sbjct: 228 NPETFNTMISFYGEHAKFAEASKVFAEMMKAGVELTTVTFNAMIHVYGKAGRTREAELLV 287
Query: 229 EEIKLLGEPL-DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
++K + D +Y S++ YV+ L+ L M V ++ L+ Y+
Sbjct: 288 TKMKQRKDCCPDVATYNSLIEMYVKNDKLELVSGCLERMRDSGVSPDQVTFRTLISAYAA 347
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR-KAGLEPS 344
N A+ + + ++ +G D M ++I Y A KA + F+ + + GLE S
Sbjct: 348 NNVVWKAEALVQEMEGSGFFIDQAMYTVMIAMYVRARDVSKAESVFRFLHSRGGLEVS 405
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 95/232 (40%), Gaps = 2/232 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ YG + +A AM++ G ++ + ++ + K L++ + +K
Sbjct: 441 YNVMMKAYGACDRFTDAVTVFEAMEKDGASPNEASFNSLIQLLCKGRLLEILQRVLVLVK 500
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G S S+V Y G + E + +EM A V Y ALL Y+ G +
Sbjct: 501 AAGFKPSLASCSSVVSFYGDMGRVREAERVFKEMLASGVEADVICYSALLNAYAEAGFAR 560
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
AQ+ ++++ AG PD + ++ Y G + +A ++ + + L P +L
Sbjct: 561 EAQQTLDSLKAAGFVPDTIVYTSMMKLYSNLGLTAEAEKIYEEISR--LSPDVFAANTML 618
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
+ K A + ++R + + A + ++ G +E+ V R
Sbjct: 619 NLYIKSGMFTEAEQLFRAMQRGKPGLNEVACTMMLKLYREAGKIEQGLDVAR 670
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 98/252 (38%), Gaps = 8/252 (3%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L E I Y+ ++ +G+ A M G D+V ++ + + + G+
Sbjct: 143 MLGERVPPTIFTYSILVDVHGRAGMKDEAIRFYRHMIESGVEPDEVMVSTYMNLQRRFGD 202
Query: 221 LKMAEET----FEEIKLLG---EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYV 273
L+ AE+ F E + G P + ++ +M+ Y + EM V +
Sbjct: 203 LEEAEKAFWGLFSENLVDGTTKRPENPETFNTMISFYGEHAKFAEASKVFAEMMKAGVEL 262
Query: 274 GSEVYKALLRGYSMNGNSEGAQRVFEAI-QFAGITPDARMCALLINAYQMAGQSQKAYTA 332
+ + A++ Y G + A+ + + Q PD LI Y + +
Sbjct: 263 TTVTFNAMIHVYGKAGRTREAELLVTKMKQRKDCCPDVATYNSLIEMYVKNDKLELVSGC 322
Query: 333 FQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKR 392
+ MR +G+ P ++SA N + +A + ++E GF + + + A + R
Sbjct: 323 LERMRDSGVSPDQVTFRTLISAYAANNVVWKAEALVQEMEGSGFFIDQAMYTVMIAMYVR 382
Query: 393 LGVVEEVEHVLR 404
V + E V R
Sbjct: 383 ARDVSKAESVFR 394
>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
Length = 1096
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 95/210 (45%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M++ G+ VT ++ Y K G K A E + +K G D +Y ++ R+
Sbjct: 219 MEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNR 278
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
+ +G +LLR+M + ++ Y L+ G+S G A ++ + G++P+
Sbjct: 279 IAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNA 338
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
LI+ + G ++A F M GL PS+ ++L K + + A F + ++R+G
Sbjct: 339 LIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNG 398
Query: 376 FMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
VG+ + + G ++E +L E
Sbjct: 399 VCVGRITYTGMIDGLCKNGFLDEAVVLLNE 428
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 88/232 (37%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+G+ + ++ A L M G + VT ++ + GN K A + F ++
Sbjct: 301 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME 360
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + SYG ++ + D M V VG Y ++ G NG +
Sbjct: 361 AKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLD 420
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + GI PD + LIN + G+ + A + + GL P+ + ++
Sbjct: 421 EAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 480
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
C + L A+ + +G L + G V E E +R
Sbjct: 481 YNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMR 532
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 104/257 (40%), Gaps = 10/257 (3%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMK---RRGFICDQVTL 208
L+ ++ + ++L +S+ YT +I G +K + A L A + R + ++V
Sbjct: 635 LFGEMVQRSILPDSYT-----YTSLISGLCRKGKTVIA--ILFAKEAEARGNVLPNKVMY 687
Query: 209 TVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
T V KAG K E++ LG D + +M+ Y R G +++ LL EM
Sbjct: 688 TCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGN 747
Query: 269 QEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
Q Y LL GYS + + ++ +I GI PD C L+ + +
Sbjct: 748 QNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEI 807
Query: 329 AYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAA 388
+ G+E +++S C ++N A + + + G + K+ + +
Sbjct: 808 GLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVS 867
Query: 389 WFKRLGVVEEVEHVLRE 405
R +E VL E
Sbjct: 868 VLNRNHRFQESRMVLHE 884
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 89/217 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L N + +I G+ + + A M+ +G +V+ V++ K
Sbjct: 324 MLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAE 383
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+A + +K G + + +Y M+ + G LD VLL EM + Y A
Sbjct: 384 FDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSA 443
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G+ G + A+ + I G++P+ + + LI G ++A ++ M G
Sbjct: 444 LINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEG 503
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
+++++ K ++ A EF+ + DG +
Sbjct: 504 HTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 540
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 67/146 (45%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
++ + +I Y+ +I+G+ K + + A+ + + R G + + + ++ + G LK
Sbjct: 431 KDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLK 490
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A +E + L G D ++ +V + +AG + E +R M + + + + L+
Sbjct: 491 EAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLI 550
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITP 308
GY +G A VF+ + G P
Sbjct: 551 NGYGNSGEGLKAFSVFDEMTKVGHHP 576
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 96/246 (39%), Gaps = 4/246 (1%)
Query: 166 FEANIRD---YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E + RD + ++ K ++ AE + M G + + V+ ++ Y +G
Sbjct: 501 LEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGL 560
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A F+E+ +G +YGS++ + G L E L+ + A V + +Y LL
Sbjct: 561 KAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLL 620
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT-AFQNMRKAGL 341
+GN A +F + I PD+ LI+ G++ A A + + +
Sbjct: 621 TAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNV 680
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEH 401
P+ + K Q + F ++ G + + + R+G +E+
Sbjct: 681 LPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTND 740
Query: 402 VLREYG 407
+L E G
Sbjct: 741 LLPEMG 746
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 79/188 (42%), Gaps = 1/188 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I +I GY + +I+ + L M + + T +++ YSK ++ + +
Sbjct: 718 DIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLY 777
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
I L G DK + S+V+ + ML+ G +L+ + V V + L+ N
Sbjct: 778 RSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCAN 837
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP-SDKC 347
G A + + + GI+ D C +++ + Q++ M K G+ P S K
Sbjct: 838 GEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKY 897
Query: 348 VALILSAC 355
+ LI C
Sbjct: 898 IGLINGLC 905
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 90/243 (37%), Gaps = 35/243 (14%)
Query: 169 NIRDYTKIIHGYGKKMQIQNA---------------------------ENTLLAMK---R 198
N+ Y ++HGY K+ + + E+ +L +
Sbjct: 753 NLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKIL 812
Query: 199 RGFIC-----DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRA 253
+ FIC D+ T +++ G + A + + + LG LDK + +MV R
Sbjct: 813 KAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRN 872
Query: 254 GMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
++L EM Q + S Y L+ G G+ + A V E + I P
Sbjct: 873 HRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAE 932
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
+ ++ A G++ +A + M K L P+ ++ C K + ALE + +
Sbjct: 933 SAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSN 992
Query: 374 DGF 376
G
Sbjct: 993 CGL 995
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 42/232 (18%), Positives = 92/232 (39%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
+A++ Y +IH + +I L M++R ++VT ++ +S G + +A +
Sbjct: 260 DADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQ 319
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
E+ G + ++ +++ ++ G + M+A+ + Y LL G
Sbjct: 320 LLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLC 379
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
N + A+ + ++ G+ +I+ G +A M K G++P
Sbjct: 380 KNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIV 439
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
+ +++ K + A E + + R G TL R+G ++E
Sbjct: 440 TYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKE 491
>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
Length = 953
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 110/247 (44%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
L + E+S N+ ++ I++G K+ I A + MK G + VT ++ + K
Sbjct: 423 LQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKC 482
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
+ A + + ++ G + S+V + G ++ E L ++M + + + Y
Sbjct: 483 QGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNY 542
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
L+ G GN A +V + + ++PDA + + IN G+ +A + + MR
Sbjct: 543 ATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRN 602
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
GLEP ++SA +E ++AL+ L +++ TL GVVE+
Sbjct: 603 TGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEK 662
Query: 399 VEHVLRE 405
+++L E
Sbjct: 663 AKYLLNE 669
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 106/251 (42%), Gaps = 1/251 (0%)
Query: 154 LQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVV 213
L+V EL ++ A+I Y ++H + A L M RG D +T +++
Sbjct: 699 LEVHEL-MMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALIL 757
Query: 214 MYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYV 273
+ K+ +L A T+ ++ G + ++ +++ AG + + ++ EM +
Sbjct: 758 GHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEP 817
Query: 274 GSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAF 333
+ Y L+ GY+ N A R++ + G P A LI+ + AG +A F
Sbjct: 818 NNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELF 877
Query: 334 QNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRL 393
M++ G+ + ++L+ K L D++ GF K +++ F +
Sbjct: 878 SEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISSMSRAFSKP 937
Query: 394 GVVEEVEHVLR 404
G+ E +L+
Sbjct: 938 GMTWEARRLLK 948
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 111/251 (44%), Gaps = 4/251 (1%)
Query: 159 LALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
L LL E S + N+ YT ++ G + ++ A+ L M GF +T ++
Sbjct: 629 LKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQA 688
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
S + + + E E + G D Y ++V GM + ++L EM + +
Sbjct: 689 CSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPD 748
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+ + AL+ G+ + + + A + + G++P+ L+ + AG+ +A T
Sbjct: 749 TITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVIC 808
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
M+K GLEP++ ++++ K++ AL ++ GF+ +L + F + G
Sbjct: 809 EMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAG 868
Query: 395 VVEEVEHVLRE 405
++ + + + E
Sbjct: 869 MMNQAKELFSE 879
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 75/196 (38%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L E EAN +++G K I+ AE M RG + D V ++ K GN
Sbjct: 495 MLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGN 554
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + +E+ D Y + R G + L+EM + Y
Sbjct: 555 MPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNT 614
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ GN+ A ++ ++++ I P+ L+ AG +KA M AG
Sbjct: 615 MISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAG 674
Query: 341 LEPSDKCVALILSACE 356
P+ +L AC
Sbjct: 675 FTPTPLTYRRVLQACS 690
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 105/256 (41%), Gaps = 3/256 (1%)
Query: 151 PLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTV 210
P L+V + L+E + + Y I+ + + A++ L M+ G DQ T
Sbjct: 556 PAALKVGQ-ELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNT 614
Query: 211 MVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE 270
M+ + GN A + E+K + +Y ++V+ + AG++++ + LL EM +
Sbjct: 615 MISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAG 674
Query: 271 VYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAY 330
Y+ +L+ S + + V E + AG+ D + L++ G ++KA
Sbjct: 675 FTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKAT 734
Query: 331 TAFQNMRKAGLEPSDKCV-ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAW 389
M G+ P ALIL C K + L+ A + G TL
Sbjct: 735 IVLDEMLGRGIAPDTITFNALILGHC-KSSHLDNAFATYAQMLHQGLSPNIATFNTLLGG 793
Query: 390 FKRLGVVEEVEHVLRE 405
+ G + E + V+ E
Sbjct: 794 LESAGRIGEADTVICE 809
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 124/294 (42%), Gaps = 12/294 (4%)
Query: 121 SDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEES------FEANIRDYT 174
S L+AA RF +P D L L + L L+ L+LL S A+ Y
Sbjct: 64 SGLVAAASRF-RPVPGDPL-TLNSIILSYCSLHALRPALSLLRSSSGPQPQVAADTVSYN 121
Query: 175 KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLL 234
+ G ++ + A L M +RG D VT++ +V S+ G + A E+ +
Sbjct: 122 IFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEA-AALAEMLVR 180
Query: 235 GEPLDKR---SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
G +D + +++ Y + + ++ M Q + + Y L+ G+ +G++
Sbjct: 181 GRGIDGLGVVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDA 240
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALI 351
+ A V E ++ G+ P LI Y + ++A+T ++ M ++G+ P ++ +
Sbjct: 241 DAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSAL 300
Query: 352 LSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ ++ + + A ++++ G CT ++ V E +L E
Sbjct: 301 VDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGE 354
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 78/178 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + NI + ++ G +I A+ + MK+ G + +T ++V Y+K N
Sbjct: 775 MLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSN 834
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A + E+ G +Y S++ + +AGM+++ + L EM + V S Y
Sbjct: 835 KVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDI 894
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
LL G+S N + + + ++ G P + + A+ G + +A + + K
Sbjct: 895 LLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISSMSRAFSKPGMTWEARRLLKTLFK 952
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 90/213 (42%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ E ++ +T +I Y K +I+ A M R G + D VTL+ +V + G
Sbjct: 253 DGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSE 312
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F E+ +G + +Y + + + + ++ LL EM ++ V + +Y ++
Sbjct: 313 AYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMD 372
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G E A+ V ITP+ +L++A+ AG A M + + P
Sbjct: 373 RLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSP 432
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+ + IL+ K + +A ++ ++ G
Sbjct: 433 NVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGI 465
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 86/218 (39%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y I K ++ + L M RG D V T ++ K G ++ A++
Sbjct: 328 NHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVL 387
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ +Y +V A+ RAG +D E +L +M+ + V + ++L G
Sbjct: 388 RHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKR 447
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G A ++ +GI P+ LI+ + + A +++M G+E ++ V
Sbjct: 448 GCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIV 507
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
+++ K + A D+ G ++ TL
Sbjct: 508 DSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATL 545
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 88/185 (47%), Gaps = 1/185 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G K +++ + M+ RG + ++ T + ++ Y K G+L+ AE+ + +
Sbjct: 505 YNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRML 564
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + Y ++ +Y ++ +++ + M Q V + + +Y L+ S +GN E
Sbjct: 565 DTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNME 624
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV-ALI 351
A RV I+ G PD + + LI+ +KA+ M K G++P+ C ALI
Sbjct: 625 AAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALI 684
Query: 352 LSACE 356
C+
Sbjct: 685 DGLCK 689
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 89/210 (42%), Gaps = 1/210 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L+ + N Y ++ Y K I+ +T +M +G + D +++ S +GN
Sbjct: 563 MLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGN 622
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ A I+ G D Y S++ + ++ +L EM + V Y A
Sbjct: 623 MEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNA 682
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G +G+ A+ VF +I G+ P+ LI+ G A+ + M G
Sbjct: 683 LIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATG 742
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLID 370
+ P +++ + C L +A+ FLI+
Sbjct: 743 ITPDAFVYSVLTTGCSSAGDLEQAM-FLIE 771
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/207 (19%), Positives = 93/207 (44%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y+ +IHG + + + A + L M +G + ++ Y + GN+ +A E F
Sbjct: 431 NVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIF 490
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+++ + D Y S++ + G ++ +M + + Y L+ GY N
Sbjct: 491 DKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKN 550
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G+ E A+++ + + G+ P+ + L+ +Y + +K + F++M G+ ++
Sbjct: 551 GDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIY 610
Query: 349 ALILSACEKENQLNRALEFLIDLERDG 375
+++ + A L +E++G
Sbjct: 611 GILIHNLSSSGNMEAAFRVLSGIEKNG 637
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 102/226 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+G K + A+ L M + V ++ + + GN A + +E+
Sbjct: 295 YGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMV 354
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G +K +Y ++V + G +DR +LL++M + Y ++ G+ + + +
Sbjct: 355 AAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKK 414
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A R+ ++ AGI+P+ +++I+ +G+ +KA + M GL+P+ A ++
Sbjct: 415 DAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLI 474
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
S +E ++ A E + + + +L ++G VEE
Sbjct: 475 SGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEE 520
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 90/218 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ +S + Y II G+ + ++A L M+ G + T ++M+ ++G
Sbjct: 388 MVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGE 447
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + EE+ G + Y ++ Y R G + + +M V Y +
Sbjct: 448 PEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNS 507
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G S G E + + F +Q G+ P+ + LI+ Y G + A Q M G
Sbjct: 508 LIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTG 567
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMV 378
L+P+D +L + K + + + + G M+
Sbjct: 568 LKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVML 605
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 87/200 (43%)
Query: 177 IHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGE 236
+ Y K + A+ L+ M+ RG + VT V++ ++G ++ A ++++ G
Sbjct: 229 LEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGL 288
Query: 237 PLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQR 296
D +YG+++ ++ + + LL EM E+ VY L+ G+ GN++ A +
Sbjct: 289 VPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFK 348
Query: 297 VFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACE 356
+ + + AG+ P+ L+ GQ +A + M + P LI+
Sbjct: 349 MIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHF 408
Query: 357 KENQLNRALEFLIDLERDGF 376
+ + A L ++E G
Sbjct: 409 RHHSKKDAFRLLSEMENAGI 428
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 83/198 (41%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
+ N Y ++ G K Q+ A L M R D +T +++ + + + K A
Sbjct: 359 QPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFR 418
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
E++ G + +Y M+ ++G ++ LL EM + + + VY L+ GY
Sbjct: 419 LLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYC 478
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
GN A +F+ + + PD LI G+ +++ F M++ GL P++
Sbjct: 479 REGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEF 538
Query: 347 CVALILSACEKENQLNRA 364
+ ++ K L A
Sbjct: 539 TYSGLIHGYLKNGDLESA 556
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 68/163 (41%)
Query: 243 YGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQ 302
+GS + AY + D + +L EM + + + Y L+ G +G E A + ++
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 284
Query: 303 FAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLN 362
G+ PD LIN + +S +A M A L+P+ A ++ +E +
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNAD 344
Query: 363 RALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
A + + ++ G K L ++G ++ +L++
Sbjct: 345 EAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQ 387
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 53/110 (48%), Gaps = 8/110 (7%)
Query: 161 LLEESF---EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSK 217
L+EE F A+I + ++ G+ K+ ++Q L + RG + + +T+ ++ S+
Sbjct: 769 LIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSE 828
Query: 218 AGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMD 267
AG L F E++ R + S+ M M+++G++ L +D
Sbjct: 829 AGKLSEVHTIFVELQQKTSESAARHFSSLFM-----DMINQGKIPLDVVD 873
Score = 38.5 bits (88), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 96/252 (38%), Gaps = 30/252 (11%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
++L + N YT +I G K I NA M G D +V+ S AG
Sbjct: 702 SILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAG 761
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+L+ A EE+ L G S+ ++V + + G + LL + + + + +
Sbjct: 762 DLEQAMFLIEEMFLRGHA-SISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIE 820
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
++ G S G +F +Q AR + L F +M
Sbjct: 821 NIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSL----------------FMDMINQ 864
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFK------RL 393
G P D +I C KE L++AL + RD +V K A +++ R
Sbjct: 865 GKIPLDVVDDMIRDHC-KEGNLDKAL-----MLRD-VIVAKSAPMGCSSYLAIVDNLCRK 917
Query: 394 GVVEEVEHVLRE 405
G + E ++L+E
Sbjct: 918 GKLSEALNLLKE 929
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 91/204 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+T ++ G+ +K + A N M++RG D VT T ++ +AG LK AE +E++
Sbjct: 358 FTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEME 417
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G +D +Y ++ Y + G + ++ +M + V Y AL G G+
Sbjct: 418 DKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVC 477
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + G+ + LIN AG ++A +M +AGL+P I+
Sbjct: 478 AANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTII 537
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
A + +L+RA L ++ G
Sbjct: 538 GALCQSKELDRAHSLLQEMLDKGI 561
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 94/216 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++++ N+ YT + G K+ + A L M +G + T ++ KAGN
Sbjct: 451 MVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGN 510
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ A T ++ G D +Y +++ A ++ LDR LL+EM + + Y
Sbjct: 511 LEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNV 570
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G+ M+G EG +R+ E + I P+ L+ Y + + ++ M
Sbjct: 571 LMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+ P++ +++ K + AL F ++ GF
Sbjct: 631 VVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGF 666
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 88/211 (41%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
E N YT +I + Q+ +A + M G + D T ++ + + G+L A
Sbjct: 316 LELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAAR 375
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F+E++ G D +Y +++ RAG L E +L+EM+ + + V + Y L+ GY
Sbjct: 376 NWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGY 435
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
G A V + +TP+ L + G A M GLE +
Sbjct: 436 CKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNI 495
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGF 376
+++ K L +A+ +ID++ G
Sbjct: 496 FTYNSLINGLCKAGNLEQAMRTMIDMDEAGL 526
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 106/256 (41%), Gaps = 6/256 (2%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y ++HGY +++ A L M RG + V T ++ + G + A
Sbjct: 284 DVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVV 343
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++ + G LD + +++ + R G L EM + + Y AL+ G
Sbjct: 344 EDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRA 403
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A+RV + ++ G+ DA +LI+ Y G+ +A+ M + + P+
Sbjct: 404 GELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTY 463
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV---LRE 405
+ K+ + A E L ++ G + +L + G +E+ + E
Sbjct: 464 TALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDE 523
Query: 406 YGLRE---TYSKIPGS 418
GL+ TY+ I G+
Sbjct: 524 AGLKPDVYTYTTIIGA 539
>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Brachypodium distachyon]
Length = 1102
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 91/204 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y I+ GK M+I++ M +G+ VT ++ K+ L A + + ++
Sbjct: 814 YNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLM 873
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G +YG ++ ++ G ++ E L EM +Y LL GY + GN+E
Sbjct: 874 SEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTE 933
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
+F+ + GI PD + +LI A AG+ + + F+ + + GLEP L++
Sbjct: 934 KVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLI 993
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
+ +L A+ D+E+ G
Sbjct: 994 HGLGRSGRLEEAVSLFNDMEKSGI 1017
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 128/307 (41%), Gaps = 19/307 (6%)
Query: 109 QIICVSPETGNLSDLLAAWVRF----MKPRRADWLAVLKQLKLMEHPLYLQVAEL--ALL 162
QI+C + G +SD + + KP R ++ +L K ++ V E+ A+
Sbjct: 294 QILC---DAGRVSDAKDVFWKMKASDQKPDRVTYITLLD--KCGDNGDSRSVIEIWNAMK 348
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+ + N+ YT ++ + ++ A + MK++G Q + ++ + KA L
Sbjct: 349 ADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLN 408
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG----MLDRGEVLLREMDAQEVYVGSEVY 278
A E F + + G + +Y + Y ++G + R E++ + +V G+ V
Sbjct: 409 HALELFNHMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVL 468
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
+L + +G A+RVF ++ G+ PD ++I A + +A F M +
Sbjct: 469 YSLAK----SGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIE 524
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
P V ++ K + N A + +L+ TL A R G V+E
Sbjct: 525 TRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKE 584
Query: 399 VEHVLRE 405
V H+L E
Sbjct: 585 VMHLLEE 591
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/214 (19%), Positives = 93/214 (43%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
++ E Y +I G+ K ++ +A M G + T + + Y K+G
Sbjct: 384 QKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKSGESL 443
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A + +E +K G D + +++ + ++G L + + E+ + V + Y ++
Sbjct: 444 KAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMMI 503
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
+ S N++ A +VF + PD LI+ AG+ +A+ F +++ L+
Sbjct: 504 KCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLD 563
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
P+D +L+ +E ++ + L ++ + +
Sbjct: 564 PTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSY 597
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 96/241 (39%), Gaps = 5/241 (2%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
+AN+ + I G + +++A L MK G + + T ++ K+G + A E
Sbjct: 144 KANVGTFLTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTYNGLIYFLVKSGYDREAME 203
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEV--LLREMDAQEVYVGSEVYKALLRG 284
++ + G R+Y +++A+ G D V LLREM+ V Y +R
Sbjct: 204 VYKVMATDGIVPSVRTYSVLMLAF---GKRDVETVVWLLREMEDHGVKPNVYSYTICIRV 260
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
G E A ++ + ++ G PD +LI AG+ A F M+ + +P
Sbjct: 261 LGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPD 320
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
+L C +E ++ DG+ A + ++G V+E V
Sbjct: 321 RVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFD 380
Query: 405 E 405
+
Sbjct: 381 Q 381
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 97/248 (39%), Gaps = 35/248 (14%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+ + N+ YT I G+ + + A L M+ G D VT TV++ + AG +
Sbjct: 244 DHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVS 303
Query: 223 MAEETFEEIK-------------LL---GEPLDKRS-------------------YGSMV 247
A++ F ++K LL G+ D RS Y ++V
Sbjct: 304 DAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVV 363
Query: 248 MAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGIT 307
A + G +D + +M + + Y +L+ G+ A +F + G T
Sbjct: 364 DALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPT 423
Query: 308 PDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
P+ L IN Y +G+S KA ++ M+ G+ P +L + K +L A
Sbjct: 424 PNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRV 483
Query: 368 LIDLERDG 375
+L+ G
Sbjct: 484 FHELKSIG 491
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 80/184 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L+ E F Y ++ G K +I++AE+ M G ++ +++ Y AGN
Sbjct: 872 LMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGN 931
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ E F+ + G D +SY ++ A AG L+ R++ + Y
Sbjct: 932 TEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNL 991
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G +G E A +F ++ +GI P+ LI G++ +A ++ + K G
Sbjct: 992 LIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNG 1051
Query: 341 LEPS 344
+P+
Sbjct: 1052 WKPN 1055
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 96/247 (38%), Gaps = 11/247 (4%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
+++ K ++ A+ +K G D +T T+M+ SKA N A + F E+
Sbjct: 467 VLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETR 526
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
D + S++ +AG + + E+ + Y LL G G +
Sbjct: 527 CVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVM 586
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
+ E + P+ +++ G+ A NM G P L
Sbjct: 587 HLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGL 646
Query: 356 EKENQLNRALEFLIDLERDGFMVGKEAS--CTLAAWFKRLGVVEEVEHVLREYGLRETYS 413
KE++L A +++ ++ + + CT+ F + G++ E H L+EY L+
Sbjct: 647 VKEDRLTEAFRIFCQMKK---VLAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQ---- 699
Query: 414 KIPGSRS 420
PGS++
Sbjct: 700 --PGSKA 704
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/207 (19%), Positives = 90/207 (43%), Gaps = 1/207 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++R Y+ ++ +GK+ ++ L M+ G + + T+ + + +AG + A +
Sbjct: 216 SVRTYSVLMLAFGKR-DVETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKIL 274
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++++ G D + ++ AG + + + +M A + Y LL N
Sbjct: 275 QKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYITLLDKCGDN 334
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G+S ++ A++ G + +++A G+ +A F M++ G+EP
Sbjct: 335 GDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSY 394
Query: 349 ALILSACEKENQLNRALEFLIDLERDG 375
++S K ++LN ALE + G
Sbjct: 395 NSLISGFLKADRLNHALELFNHMNIHG 421
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/181 (19%), Positives = 81/181 (44%), Gaps = 4/181 (2%)
Query: 132 KPRRADWLAVLKQLKLMEHPLYLQVAEL--ALLEESFEANIRDYTKIIHGYGKKMQIQNA 189
KP RA + +L +L + +V EL ++++ +I+ YT +I ++ ++
Sbjct: 913 KPNRAIYNILLNGYRLAGNTE--KVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDS 970
Query: 190 ENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMA 249
+ + G D +T +++ ++G L+ A F +++ G + +Y S+++
Sbjct: 971 LSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILY 1030
Query: 250 YVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPD 309
+ G + E+ Y AL+ GYS++G+++ A + + G P+
Sbjct: 1031 LGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPN 1090
Query: 310 A 310
+
Sbjct: 1091 S 1091
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 107/247 (43%), Gaps = 11/247 (4%)
Query: 155 QVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
Q+ E + + F ++ Y+ +I G+ K ++ M +RG + + VT T ++
Sbjct: 382 QMFEFMVSKHCF-PDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQG 440
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
+AG+ MA+E F+E+ G P + +Y +++ + G L++ V+ + ++
Sbjct: 441 LFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 500
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
Y ++ G G E +F + G+ PD +I+ + G ++A F+
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFK 560
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
M++ G P+ C ++ A ++ D E ++ + SC A +G
Sbjct: 561 EMKEDGTLPNSGCYNTLIRARLRDG----------DREASAELIKEMRSCGFAGDASTIG 610
Query: 395 VVEEVEH 401
+V + H
Sbjct: 611 LVTNMLH 617
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 105/237 (44%), Gaps = 6/237 (2%)
Query: 140 AVLKQLKLME-HPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKR 198
A +K+ KL+E LY + +++ S + +I Y+ +I+G+ ++ A+ M
Sbjct: 335 AFVKEGKLVEAEKLYDE-----MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS 389
Query: 199 RGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDR 258
+ D V+ + ++ + KA + E F E+ G + +Y +++ +AG D
Sbjct: 390 KHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDM 449
Query: 259 GEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLIN 318
+ + +EM + V Y LL G NG E A VFE +Q + + P ++I
Sbjct: 450 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 509
Query: 319 AYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
AG+ + + F N+ G++P ++S ++ A +++ DG
Sbjct: 510 GMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG 566
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 86/210 (40%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
E + YT II G K + +A N M+ +G + VT + ++ G A
Sbjct: 252 LEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS 311
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
++ D ++ +++ A+V+ G L E L EM + + Y +L+ G+
Sbjct: 312 RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 371
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
M+ + A+++FE + PD + LI + A + + F+ M + GL +
Sbjct: 372 CMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNT 431
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDG 375
++ + + A E ++ DG
Sbjct: 432 VTYTTLIQGLFQAGDCDMAQEIFKEMVSDG 461
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 95/217 (43%), Gaps = 7/217 (3%)
Query: 151 PLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTV 210
PL L V +++ +E NI + +++GY +I A + M G+ + VT
Sbjct: 133 PLALAVLG-KMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNT 191
Query: 211 MV---VMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMD 267
++ +++KA A + + G D +YG +V + G D +LL +M+
Sbjct: 192 LIHGLFLHNKASE---AVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKME 248
Query: 268 AQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQ 327
++ G +Y ++ G N + + A +F+ ++ GI P+ + LI+ G+
Sbjct: 249 QGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWS 308
Query: 328 KAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
A +M + + P + ++ A KE +L A
Sbjct: 309 DASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA 345
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 33/207 (15%), Positives = 80/207 (38%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I +++K++ K + + M+ G + T ++++ + + L +A
Sbjct: 80 SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAVL 139
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ LG + + S++ Y + + L+ +M + + L+ G ++
Sbjct: 140 GKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLH 199
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
+ A + + + G PD +++N G + A+ M + LEP
Sbjct: 200 NKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIY 259
Query: 349 ALILSACEKENQLNRALEFLIDLERDG 375
I+ K ++ AL ++E G
Sbjct: 260 TTIIDGLCKNKHMDDALNLFKEMETKG 286
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 80/177 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+G+GK +I A M + G D + T++V G + A + FEE+K
Sbjct: 939 YNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELK 998
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
L G D SY ++ ++ LD L EM + + Y AL+ + G +
Sbjct: 999 LTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVD 1058
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
A +++E +Q G+ P LI + ++G +A++ F+ M G P+ + A
Sbjct: 1059 VAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFA 1115
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 104/243 (42%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+E ++ YT +I ++ A+ + M+ D+VT ++ + K G+L+
Sbjct: 298 DEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLE 357
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
+ + E+++ G D +Y ++ A ++G +DR +L M + ++ Y ++
Sbjct: 358 TVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMI 417
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G + A + E ++ G+ P A L I+ Y +G KA F+ M+K G+
Sbjct: 418 CGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIM 477
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
PS L + +++ A + DL + G L + + G +++ +
Sbjct: 478 PSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQL 537
Query: 403 LRE 405
L E
Sbjct: 538 LSE 540
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 102/234 (43%), Gaps = 3/234 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ +GK +I + M+ RG + +T +++ K+ NL A + + E+
Sbjct: 834 YNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELM 893
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+YG ++ ++AG ++ + EM S +Y L+ G+ +G +
Sbjct: 894 SGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEID 953
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +F+ + GI PD + +L+ + G+ +A F+ ++ GL+P I+
Sbjct: 954 FACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFII 1013
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREY 406
+ K +L+ AL +++ G T A LG+ +V+ ++ Y
Sbjct: 1014 NGLGKSRRLDEALSLFSEMKNRGI---SPDLYTYNALILHLGIAGKVDVAVKMY 1064
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 89/203 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ +GK ++ + M+ G+ D VT T+++ K+G++ A + + +
Sbjct: 343 YITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMT 402
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +Y +M+ ++A LD LL M++ V + Y + Y +G+
Sbjct: 403 TKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPA 462
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A FE ++ GI P C + G+ +A F ++ K GL P +++
Sbjct: 463 KAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLM 522
Query: 353 SACEKENQLNRALEFLIDLERDG 375
K Q+++A + L ++ G
Sbjct: 523 KCYSKAGQIDKATQLLSEMISKG 545
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 93/215 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ E + +++ Y+ ++ G++ + N L MK G + T T+ + +A
Sbjct: 226 MISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARR 285
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A F+E+ G D +Y ++ A AG LD+ + L +M A Y
Sbjct: 286 IDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYIT 345
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ + G+ E +R + ++ G PD +LI A +G +A+ M G
Sbjct: 346 LMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKG 405
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+ P+ ++ K +L+ ALE L ++E G
Sbjct: 406 IFPNLHTYNTMICGLLKARRLDEALELLENMESLG 440
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 97/237 (40%), Gaps = 15/237 (6%)
Query: 130 FMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNA 189
+K RR D + L+L+E+ L V A Y I YGK A
Sbjct: 420 LLKARRLD-----EALELLENMESLGVKPTAF----------SYVLFIDYYGKSGDPAKA 464
Query: 190 ENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMA 249
+T MK+RG + + ++ G + AE+ F ++ G D +Y ++
Sbjct: 465 IDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKC 524
Query: 250 YVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPD 309
Y +AG +D+ LL EM ++ + +L+ G + A ++F ++ + P
Sbjct: 525 YSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPT 584
Query: 310 ARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALE 366
+L+ G+ KA F +M ++G P+ +L K + ++ AL+
Sbjct: 585 VVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALK 641
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 85/207 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I G K ++ A L M+ G + + + Y K+G+ A +TF
Sbjct: 409 NLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTF 468
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E +K G + + + G + E + ++ + S Y L++ YS
Sbjct: 469 ETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKA 528
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A ++ + G PD + LIN AG+ A+ F ++ L P+
Sbjct: 529 GQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTY 588
Query: 349 ALILSACEKENQLNRALEFLIDLERDG 375
++L+ KE ++ +ALE + G
Sbjct: 589 NILLTGLGKEGKILKALELFGSMTESG 615
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 103/252 (40%), Gaps = 6/252 (2%)
Query: 159 LALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
+ LLEE NI YT I G+ +I +A M G D +T TV++
Sbjct: 255 MNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDA 314
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
AG L A+E + +++ D+ +Y +++ + + G L+ + EM+
Sbjct: 315 LCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPD 374
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
Y L+ +G+ + A + + + GI P+ +I A + +A +
Sbjct: 375 VVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLE 434
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAW-FKRL 393
NM G++P+ L + K +A++ +++ G M A+C + +
Sbjct: 435 NMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIM-PSIAACNASLYTLAET 493
Query: 394 GVVEEVEHVLRE 405
G + E E + +
Sbjct: 494 GRISEAEDIFND 505
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 10/123 (8%)
Query: 264 REMDAQEVY------VGS----EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
+ +DAQ V+ +G E Y L+ G + +E A +FE ++ AG P+
Sbjct: 775 KALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTY 834
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
LL++A+ + + K Y + MR G EP+ +I+SA K N LN+AL+ +L
Sbjct: 835 NLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMS 894
Query: 374 DGF 376
F
Sbjct: 895 GDF 897
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/181 (20%), Positives = 84/181 (46%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
MK G + T +++ + K+ + + + E++ G + ++ ++ A V++
Sbjct: 822 MKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNN 881
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
L++ L E+ + + Y L+ G G SE A ++FE + G P++ + +
Sbjct: 882 LNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNI 941
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
LIN + +G+ A F+ M K G+ P K +++ +++ A+++ +L+ G
Sbjct: 942 LINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTG 1001
Query: 376 F 376
Sbjct: 1002 L 1002
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 75/184 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L+ F Y +I G K + + A M G + V +++ + K+G
Sbjct: 892 LMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGE 951
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A E F+++ G D +SY +V G +D E+ + + Y
Sbjct: 952 IDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNF 1011
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G + + A +F ++ GI+PD LI +AG+ A ++ ++ G
Sbjct: 1012 IINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVG 1071
Query: 341 LEPS 344
LEPS
Sbjct: 1072 LEPS 1075
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 79/208 (37%), Gaps = 1/208 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y I K I A L M GFI + + ++ + G A + +
Sbjct: 165 NLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLIHLL-LPGFCNEALKVY 223
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ + G ++Y ++++A R G + LL EM + + Y +R
Sbjct: 224 KRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRA 283
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
+ A +F+ + G PD +LI+A AG+ KA + MR + P
Sbjct: 284 RRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTY 343
Query: 349 ALILSACEKENQLNRALEFLIDLERDGF 376
++ K L F ++E DG+
Sbjct: 344 ITLMDKFGKVGDLETVKRFWNEMEVDGY 371
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 97/236 (41%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
AN+ Y +I+GY K + A M R+ + VT ++ G L+ A
Sbjct: 288 ANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISL 347
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
F E+ G+ D +Y ++ + LD+ LL+ ++ ++Y +L G
Sbjct: 348 FHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCR 407
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G E A+ +F + G+ P+ ++I+ G +A F M K G P+D
Sbjct: 408 AGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCT 467
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
LI + N+ R +E L ++ GF V + L G+ + V+ +L
Sbjct: 468 YNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQIL 523
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 72/168 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+R Y +I+GY + ++ A L M +G I D VT ++ G L+ A F
Sbjct: 777 NVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALF 836
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E+ G+ D +Y ++ + L VLL+ ++ + VY + G
Sbjct: 837 HEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRA 896
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
G E A+ +F + G+ PD R ++I+ G +A F+ M
Sbjct: 897 GELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKM 944
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 85/204 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ E ++ YT ++ G+ + ++ A M +G + + + +++ Y +
Sbjct: 734 MIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQR 793
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A E++ L G D +Y +++ G L L EM A Y+
Sbjct: 794 MDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRI 853
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL N + A + +AI+ + + D + + I+ AG+ + A F N+ G
Sbjct: 854 LLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKG 913
Query: 341 LEPSDKCVALILSACEKENQLNRA 364
L+P + +++ K L+ A
Sbjct: 914 LQPDVRTYNIMIHGLCKRGLLDEA 937
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 72/184 (39%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ E F+ N+ Y +I+G K Q+ A N M +G + VT ++ K
Sbjct: 141 MIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCE 200
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
K E+ D + ++V A + GM+ ++ M + V Y A
Sbjct: 201 WKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNA 260
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G+ + + A +VF+ + + LIN Y KA F+ M +
Sbjct: 261 LMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQE 320
Query: 341 LEPS 344
L P+
Sbjct: 321 LTPN 324
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 100/255 (39%), Gaps = 30/255 (11%)
Query: 115 PETGNLSDLLAAWVRFMK----PRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANI 170
P L D L+++ R + P D+ +L + M+H Y V L+ +SF
Sbjct: 557 PHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKH--YSTVLSLSTQMDSFGIPP 614
Query: 171 RDYTK--IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
YT +I+ + ++ A + L + + GF D VT ++ K ++ + F
Sbjct: 615 DVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCKMITKGISPDIF 674
Query: 229 ----------------EEIKLLGEPLDKR------SYGSMVMAYVRAGMLDRGEVLLREM 266
LL E ++ + + ++V A + GM+ ++ M
Sbjct: 675 TYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMM 734
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
+ V Y AL+ G+ + + A +VF+ + G P+ R +LIN Y +
Sbjct: 735 IKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRM 794
Query: 327 QKAYTAFQNMRKAGL 341
KA + M GL
Sbjct: 795 DKAMGLLEQMSLQGL 809
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 91/248 (36%), Gaps = 63/248 (25%)
Query: 63 MGKTQVKDDTSMFTWIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETGNLSD 122
M K V+ D +T + G + E +A+ F + K C P + +
Sbjct: 734 MIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGC----------VPNVRSYNI 783
Query: 123 LLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGK 182
L+ + + + +A + +L+Q+ L + A+ Y +IHG
Sbjct: 784 LINGYCQIQRMDKA--MGLLEQMSL----------------QGLIADTVTYNTLIHGLCH 825
Query: 183 KMQIQNAENTLLAMKRRGFICDQVTLTVM----------------------------VVM 214
++Q+A M G I D VT ++ +++
Sbjct: 826 VGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILV 885
Query: 215 YS-------KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMD 267
Y+ +AG L+ A + F + G D R+Y M+ + G+LD L R+MD
Sbjct: 886 YNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMD 945
Query: 268 AQEVYVGS 275
+++ S
Sbjct: 946 ENDIWSNS 953
>gi|356536919|ref|XP_003536980.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like [Glycine max]
Length = 716
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 4/183 (2%)
Query: 158 ELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKR---RGFICDQVTLTVMVVM 214
E LL + + N R YT ++ GY ++ + L AM+R +G D V+ T +V
Sbjct: 335 EPPLLPKGYAPNTRTYTTLMKGYMNAGRVSDTVRMLEAMRRLDDKGSQPDHVSYTTVVSA 394
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM-DAQEVYV 273
K G + A + E+ +G P + +Y ++ Y + +D+ LL+EM D +
Sbjct: 395 LVKVGAMDRARQVLAEMTRIGVPANLITYNVLLKGYCKQLQIDKARELLKEMVDDAGIQP 454
Query: 274 GSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAF 333
Y L+ G + +S GA F ++ GI P L+ A+ +GQ + A+ F
Sbjct: 455 DVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFAYSGQPKLAHRVF 514
Query: 334 QNM 336
M
Sbjct: 515 NEM 517
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 92/217 (42%), Gaps = 15/217 (6%)
Query: 199 RGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLL---GEPLDKRSYGSMVMAYVRAGM 255
+G+ + T T ++ Y AG + E ++ L G D SY ++V A V+ G
Sbjct: 341 KGYAPNTRTYTTLMKGYMNAGRVSDTVRMLEAMRRLDDKGSQPDHVSYTTVVSALVKVGA 400
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF-EAIQFAGITPDARMCA 314
+DR +L EM V Y LL+GY + A+ + E + AGI PD
Sbjct: 401 MDRARQVLAEMTRIGVPANLITYNVLLKGYCKQLQIDKARELLKEMVDDAGIQPDVVSYN 460
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
+LI+ + S A + F MR G+ P+ ++ A Q A +++ D
Sbjct: 461 ILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFAYSGQPKLAHRVFNEMDSD 520
Query: 375 GFMVGKEASCTLAAW------FKRLGVVEEVEHVLRE 405
L AW + RLG+VEE + V+++
Sbjct: 521 -----PRVKVDLIAWNMLVEGYCRLGLVEEAKKVVQK 552
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 97/234 (41%), Gaps = 25/234 (10%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAM-KRRGFICDQVTLTVMV----VMYSKAGNLK 222
AN+ Y ++ GY K++QI A L M G D V+ +++ ++ AG L
Sbjct: 418 ANLITYNVLLKGYCKQLQIDKARELLKEMVDDAGIQPDVVSYNILIDGCILVDDSAGALS 477
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQ-EVYVGSEVYKAL 281
F E++ G K SY +++ A+ +G + EMD+ V V + L
Sbjct: 478 F----FNEMRARGIAPTKISYTTLMKAFAYSGQPKLAHRVFNEMDSDPRVKVDLIAWNML 533
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR---- 337
+ GY G E A++V + ++ +G PD L N +A + +A + ++
Sbjct: 534 VEGYCRLGLVEEAKKVVQKMKESGFHPDVGTYGSLANGIALARKPGEALLLWNEVKERCE 593
Query: 338 --KAG---------LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGK 380
K G L+P + I C + +ALE + +E +G K
Sbjct: 594 VGKEGGKSDSSVPPLKPDGALLDTIADICVRAAFFRKALEIVACMEENGIPPNK 647
>gi|449465535|ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Cucumis sativus]
Length = 542
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 94/214 (43%), Gaps = 1/214 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
++ F+ Y +I GK Q N + MKR+G I + T ++ Y++A +K
Sbjct: 149 QKGFKHTTESYNLLIEALGKIKQFNVIWNLVSDMKRKG-ILSRETFALITRRYARARKVK 207
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A E+FE+++ G + + ++ ++ + + + + +M + Y LL
Sbjct: 208 EAVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILL 267
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G+ + N V+ ++ G PD +LINA+ A + +A F M ++
Sbjct: 268 EGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIK 327
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
PS +++ E +L ALEF L+ GF
Sbjct: 328 PSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGF 361
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 86/187 (45%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F+ + D+ +++ K ++ A+ MK F D + T+++ + + NL
Sbjct: 221 FQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKLN 280
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
E + E++ G D ++G ++ A+ +A D L EM+A+ + V+ L+ G
Sbjct: 281 EVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGL 340
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
+ A FE ++ +G P+A ++ AY + + AY MRK+G+ P+
Sbjct: 341 GSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNS 400
Query: 346 KCVALIL 352
+ +IL
Sbjct: 401 RTYDIIL 407
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 85/249 (34%), Gaps = 71/249 (28%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA------- 218
F+ +I+ YT ++ G+G+ + M+ GF D VT +++ + KA
Sbjct: 256 FKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAI 315
Query: 219 ----------------------------GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAY 250
LK A E FE++KL G + +Y ++V AY
Sbjct: 316 RLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAY 375
Query: 251 VRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFE----------- 299
+ + ++ EM V S Y +L S+ A VF+
Sbjct: 376 CWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPT 435
Query: 300 -------------------AIQF------AGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
AIQ G+ P + + LIN+ + + A T FQ
Sbjct: 436 LSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQ 495
Query: 335 NMRKAGLEP 343
M G+ P
Sbjct: 496 EMLDVGIRP 504
>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 917
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 96/209 (45%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E ++ Y ++ K Q+ A L M + + + V+ + ++ ++KAG A
Sbjct: 371 EQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALN 430
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
F E++ L LD+ SY +++ Y + G + +LREM + + Y ALL GY
Sbjct: 431 LFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYG 490
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G + ++VF ++ + P+ + LI+ Y G ++A F+ + AGL
Sbjct: 491 KQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSAGLRADVV 550
Query: 347 CVALILSACEKENQLNRALEFLIDLERDG 375
+ ++ A K + A+ + ++ ++G
Sbjct: 551 LYSALIDALCKNGLVGSAVSLIDEMTKEG 579
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 88/199 (44%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y+ +I G+ K + A N M+ D+V+ ++ +Y+K G + A +
Sbjct: 408 NVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDIL 467
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E+ +G D +Y +++ Y + G D + + EM + V Y L+ GYS
Sbjct: 468 REMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKG 527
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A VF + AG+ D + + LI+A G A + M K G+ P+
Sbjct: 528 GLYKEAMEVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTY 587
Query: 349 ALILSACEKENQLNRALEF 367
I+ A + + R+ ++
Sbjct: 588 NSIIDAFGRSATMERSADY 606
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 109/254 (42%), Gaps = 4/254 (1%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKK-MQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
++ E N+ Y +I GK M+ + M+R D++T ++ + S+
Sbjct: 293 SMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCSRG 352
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
G + A F+E+ D SY +++ A + G +D +L +M A+ + Y
Sbjct: 353 GLWEAARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSY 412
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
++ G++ G + A +F +++ I D L++ Y G+S++A + M
Sbjct: 413 STVIDGFAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMAS 472
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
G++ +L K+ + + + +++R+ + TL + + G+ +E
Sbjct: 473 VGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKE 532
Query: 399 VEHVLREY---GLR 409
V RE+ GLR
Sbjct: 533 AMEVFREFKSAGLR 546
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Query: 294 AQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILS 353
A+R+FE G + LI+AY +G ++A + F +M++ GL P+ ++
Sbjct: 252 AKRIFETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVID 311
Query: 354 ACEKEN-QLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLR 409
AC K + + +F +++R+ + +L A R G+ E ++ E R
Sbjct: 312 ACGKGGMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCSRGGLWEAARNLFDEMSNR 368
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 84/173 (48%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +IHG+ K ++++ M ++G + + +T TV++ Y G +A+E F ++
Sbjct: 330 YTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMG 389
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
P D R+Y ++ G +++ ++ + M +E+ + Y +++G G E
Sbjct: 390 SRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVE 449
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
A +F ++ G+ P+ +I+ + G +A F+ M++ G P++
Sbjct: 450 DAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPNE 502
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 105/245 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ + N+ +T +I + K +I A+ M + D T T ++ G
Sbjct: 248 MMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGR 307
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A + F ++ G ++ +Y +++ + ++ ++ G + EM + + + Y
Sbjct: 308 LDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTV 367
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L++GY + G + AQ VF + PD R +L++ G +KA F+ MRK
Sbjct: 368 LIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKRE 427
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
++ + +I+ K ++ A + L G T+ + F R G + E +
Sbjct: 428 MDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEAD 487
Query: 401 HVLRE 405
+ ++
Sbjct: 488 ALFKK 492
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/272 (19%), Positives = 116/272 (42%), Gaps = 16/272 (5%)
Query: 116 ETGNLSDLLAAWV------RFMKPRRADWLAVLKQL----KLMEHPLYLQVAELALLEES 165
E G SD AAW+ R ++P + A++ K+ME +V +++ S
Sbjct: 234 EIGRWSD--AAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKV----MIQMS 287
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
++ YT +I+G ++ A M+ G+ ++VT T ++ + K+ ++
Sbjct: 288 VYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGT 347
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+ F E+ G + +Y ++ Y G D + + +M ++ Y LL G
Sbjct: 348 KIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGL 407
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
NG E A +F+ ++ + + ++I G+ + A+ F ++ G++P+
Sbjct: 408 CYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNV 467
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFM 377
++S + ++ A ++ DGF+
Sbjct: 468 ITYTTMISGFCRRGFIHEADALFKKMKEDGFL 499
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/249 (19%), Positives = 100/249 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ FE ++ +T ++HG+ +I++A + GF + VT T ++ K +
Sbjct: 143 MMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRH 202
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A E F ++ G + +Y S+V G LLR+M + + + A
Sbjct: 203 LNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTA 262
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ + G A+ +++ + + PD LIN G+ +A F M G
Sbjct: 263 LIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNG 322
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
P++ ++ K ++ + ++ + G + L + +G + +
Sbjct: 323 YYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQ 382
Query: 401 HVLREYGLR 409
V + G R
Sbjct: 383 EVFNQMGSR 391
>gi|255557937|ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540761|gb|EEF42321.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1429
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 94/200 (47%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +++ + ++ + + M + GFI D++T ++ MY K G +A + + ++K
Sbjct: 355 YNSLLYAFAREGNVDKVKEICNEMVQMGFIRDEMTYNTIIHMYGKQGQHGLALQLYRDMK 414
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
L G D +Y ++ + +A + ++ EM V Y AL+ GY+ G
Sbjct: 415 LSGRTPDAITYTVLIDSLGKANKMVEAANVMSEMLNIGVKPTLRTYSALICGYARAGQRL 474
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ F+ ++ +GI PD +++++ + ++ KA ++ M + G+ P +L
Sbjct: 475 EAEETFDCMRRSGIRPDQLAYSVMLDVFLRFDEATKAMMLYREMVRDGITPDPTVYGAML 534
Query: 353 SACEKENQLNRALEFLIDLE 372
+EN++ + D+E
Sbjct: 535 RNLGRENKVEDIQRIIRDME 554
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 98/233 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I YG+ AE ++ +G+ D VT ++ +++ GN+ +E E+
Sbjct: 320 YNAMISVYGRCGFSGKAEQLFKELESKGYFPDAVTYNSLLYAFAREGNVDKVKEICNEMV 379
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+G D+ +Y +++ Y + G L R+M + Y L+
Sbjct: 380 QMGFIRDEMTYNTIIHMYGKQGQHGLALQLYRDMKLSGRTPDAITYTVLIDSLGKANKMV 439
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A V + G+ P R + LI Y AGQ +A F MR++G+ P +++L
Sbjct: 440 EAANVMSEMLNIGVKPTLRTYSALICGYARAGQRLEAEETFDCMRRSGIRPDQLAYSVML 499
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ ++ +A+ ++ RDG + R VE+++ ++R+
Sbjct: 500 DVFLRFDEATKAMMLYREMVRDGITPDPTVYGAMLRNLGRENKVEDIQRIIRD 552
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 94/217 (43%), Gaps = 3/217 (1%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
++R G D +T ++ S+ NL+ A + F++++ D +Y +M+ Y R G
Sbjct: 273 VRRSGLRPDIITYNTLISACSRESNLEEAVKVFDDMEAHYCQPDLWTYNAMISVYGRCGF 332
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
+ E L +E++++ + + Y +LL ++ GN + + + + G D
Sbjct: 333 SGKAEQLFKELESKGYFPDAVTYNSLLYAFAREGNVDKVKEICNEMVQMGFIRDEMTYNT 392
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+I+ Y GQ A +++M+ +G P +++ + K N++ A + ++ G
Sbjct: 393 IIHMYGKQGQHGLALQLYRDMKLSGRTPDAITYTVLIDSLGKANKMVEAANVMSEMLNIG 452
Query: 376 FMVGKEASCTLAAWFKRLGV---VEEVEHVLREYGLR 409
L + R G EE +R G+R
Sbjct: 453 VKPTLRTYSALICGYARAGQRLEAEETFDCMRRSGIR 489
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 97/207 (46%), Gaps = 7/207 (3%)
Query: 170 IRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFE 229
+R YT I + K +QI +K G D+ T ++VMY + +
Sbjct: 917 LRLYTGI-DDFRKTVQIYQR------IKEDGLQPDEDTYNTLIVMYCRDHRPEEGCSLMH 969
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
E++ +G +Y S++ A+ + ++ E L E+ ++ + Y +++ Y +G
Sbjct: 970 EMRRIGLEPKLDTYKSLIAAFGKQQLVVDAEELFEELLSKGSKLDRSFYHIMMKIYRNSG 1029
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
N A+++ ++ AG+ P LL+ +Y +GQ Q+A N+++ GL S +
Sbjct: 1030 NHSKAEKLLSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLTNLKEMGLSLSTLPYS 1089
Query: 350 LILSACEKENQLNRALEFLIDLERDGF 376
++ A K + ++ L++++++G
Sbjct: 1090 SVIDAYLKNKDYSVGIQKLVEMKKEGL 1116
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 87/195 (44%)
Query: 182 KKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKR 241
K ++++ E + M+ GF D M+ +Y+ + + + ++ IK G D+
Sbjct: 887 KGKRVRDVEAMVTEMEEAGFRPDLSIWNSMLRLYTGIDDFRKTVQIYQRIKEDGLQPDED 946
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI 301
+Y ++++ Y R + G L+ EM + + YK+L+ + A+ +FE +
Sbjct: 947 TYNTLIVMYCRDHRPEEGCSLMHEMRRIGLEPKLDTYKSLIAAFGKQQLVVDAEELFEEL 1006
Query: 302 QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQL 361
G D +++ Y+ +G KA M+ AG+EP+ + L++ + Q
Sbjct: 1007 LSKGSKLDRSFYHIMMKIYRNSGNHSKAEKLLSMMKDAGVEPTIATMHLLMVSYGSSGQP 1066
Query: 362 NRALEFLIDLERDGF 376
A + L +L+ G
Sbjct: 1067 QEAEKVLTNLKEMGL 1081
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 85/214 (39%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E+ + + Y +I Y + + + + + M+R G T ++ + K +
Sbjct: 938 EDGLQPDEDTYNTLIVMYCRDHRPEEGCSLMHEMRRIGLEPKLDTYKSLIAAFGKQQLVV 997
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
AEE FEE+ G LD+ Y M+ Y +G + E LL M V L+
Sbjct: 998 DAEELFEELLSKGSKLDRSFYHIMMKIYRNSGNHSKAEKLLSMMKDAGVEPTIATMHLLM 1057
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
Y +G + A++V ++ G++ + +I+AY M+K GLE
Sbjct: 1058 VSYGSSGQPQEAEKVLTNLKEMGLSLSTLPYSSVIDAYLKNKDYSVGIQKLVEMKKEGLE 1117
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
P + + A + A+ L L+ GF
Sbjct: 1118 PDHRIWTCFIRAASLSEHTHDAILLLQALQDSGF 1151
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 89/215 (41%), Gaps = 2/215 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL- 221
E + + ++ Y ++ Y + + + L M+ RG D V+ ++ KAG +
Sbjct: 203 ESTVDNTVQVYNAMMGVYARTGRFNKVQGMLDLMRERGCEPDLVSFNTLINARLKAGAMT 262
Query: 222 -KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+A E E++ G D +Y +++ A R L+ + +M+A Y A
Sbjct: 263 PNVAIELLNEVRRSGLRPDIITYNTLISACSRESNLEEAVKVFDDMEAHYCQPDLWTYNA 322
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ Y G S A+++F+ ++ G PDA L+ A+ G K M + G
Sbjct: 323 MISVYGRCGFSGKAEQLFKELESKGYFPDAVTYNSLLYAFAREGNVDKVKEICNEMVQMG 382
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+ I+ K+ Q AL+ D++ G
Sbjct: 383 FIRDEMTYNTIIHMYGKQGQHGLALQLYRDMKLSG 417
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 73/155 (47%), Gaps = 1/155 (0%)
Query: 211 MVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVM-AYVRAGMLDRGEVLLREMDAQ 269
MV+MY K G + A + ++ G P DK S V+ Y + + + E L+ + +
Sbjct: 705 MVLMYCKMGFPETAHYLIDLAEIEGMPFDKISIDVAVIETYGKLKLWQKAESLVGNLRQR 764
Query: 270 EVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
V +V+ AL++ Y+ +G E A+ VF + G +P L+ A + G+ ++
Sbjct: 765 CTNVDRKVWNALIQAYAASGCYEQARAVFNTMMRDGPSPTVDSINGLLQALIVDGRLEEL 824
Query: 330 YTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
Y Q ++ G + S + LIL A + + + A
Sbjct: 825 YVVTQEIQDMGFQISKSSILLILDAFARVSNIAEA 859
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 82/181 (45%), Gaps = 3/181 (1%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
E + Y +I +GK+ + +AE + +G D+ +M+ +Y +GN AE
Sbjct: 976 LEPKLDTYKSLIAAFGKQQLVVDAEELFEELLSKGSKLDRSFYHIMMKIYRNSGNHSKAE 1035
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+ +K G + ++++Y +G E +L + + + + Y +++ Y
Sbjct: 1036 KLLSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLTNLKEMGLSLSTLPYSSVIDAY 1095
Query: 286 SMNGN-SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE-P 343
N + S G Q++ E ++ G+ PD R+ I A ++ + A Q ++ +G + P
Sbjct: 1096 LKNKDYSVGIQKLVE-MKKEGLEPDHRIWTCFIRAASLSEHTHDAILLLQALQDSGFDLP 1154
Query: 344 S 344
S
Sbjct: 1155 S 1155
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 35/182 (19%), Positives = 82/182 (45%), Gaps = 12/182 (6%)
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
GF + ++ +++ +++ N+ A++ ++ +K G + +M + + G+L +G
Sbjct: 835 GFQISKSSILLILDAFARVSNIAEAKKIYQGMKAAG------YFPTMHLYRIMIGLLCKG 888
Query: 260 ------EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
E ++ EM+ ++ ++LR Y+ + ++++ I+ G+ PD
Sbjct: 889 KRVRDVEAMVTEMEEAGFRPDLSIWNSMLRLYTGIDDFRKTVQIYQRIKEDGLQPDEDTY 948
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
LI Y + ++ + MR+ GLEP +++A K+ + A E +L
Sbjct: 949 NTLIVMYCRDHRPEEGCSLMHEMRRIGLEPKLDTYKSLIAAFGKQQLVVDAEELFEELLS 1008
Query: 374 DG 375
G
Sbjct: 1009 KG 1010
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 51/107 (47%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + +R Y+ +I GY + Q AE T M+R G DQ+ +VM+ ++ +
Sbjct: 448 MLNIGVKPTLRTYSALICGYARAGQRLEAEETFDCMRRSGIRPDQLAYSVMLDVFLRFDE 507
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMD 267
A + E+ G D YG+M+ R ++ + ++R+M+
Sbjct: 508 ATKAMMLYREMVRDGITPDPTVYGAMLRNLGRENKVEDIQRIIRDME 554
>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 108/254 (42%), Gaps = 4/254 (1%)
Query: 159 LALLEE-SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSK 217
LA+LEE N+ YT +I G K + A+N M R G + + T +V++ + K
Sbjct: 181 LAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFK 240
Query: 218 AGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
G + + +E +K G + +Y ++ Y GM+D+ + EM + + G
Sbjct: 241 QGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMT 300
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y L+ G A ++ + G++P+ +LIN + + A F ++
Sbjct: 301 YNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLK 360
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
+GL P+ +++ K L AL+ + ++E K L F RL E
Sbjct: 361 SSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTE 420
Query: 398 ---EVEHVLREYGL 408
E+ ++ + GL
Sbjct: 421 KACEMHSLMEKSGL 434
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 99/239 (41%), Gaps = 4/239 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +++ Y A L M G + T ++ + ++ A F E+K
Sbjct: 92 YDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNELK 151
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
LD S+G M+ AG +G LL ++ + +Y L+ G +GN
Sbjct: 152 S-KVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVM 210
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ +F + G+ P+ ++L+N + G ++ + ++NM+++G+ P+ ++
Sbjct: 211 LAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLI 270
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWF---KRLGVVEEVEHVLREYGL 408
S + +++A + ++ G G L K+ G ++ H + + GL
Sbjct: 271 SEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGL 329
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 80/176 (45%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
NI Y +I+G+ ++ +A +K G VT ++ YSK NL A +
Sbjct: 332 NIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLV 391
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E++ K +Y ++ A+ R ++ + M+ + Y LL G ++
Sbjct: 392 KEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVH 451
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
GN + A ++F+++ + P++ + +I+ Y G S +A M ++G+ P+
Sbjct: 452 GNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPN 507
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/234 (18%), Positives = 100/234 (42%), Gaps = 8/234 (3%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E+ + Y +I G + + A + + + G + VT +++ + +
Sbjct: 291 EKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMD 350
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVR----AGMLDRGEVLLREMDAQEVYVGSEVY 278
A F ++K G +Y +++ Y + AG LD L++EM+ + + Y
Sbjct: 351 SAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALD----LVKEMEERCIAPSKVTY 406
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
L+ ++ ++E A + ++ +G+ PD ++L++ + G ++A F+++ +
Sbjct: 407 TILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGE 466
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKR 392
L+P+ ++ KE RAL L ++ + G + + C+ R
Sbjct: 467 MHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCR 520
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 35/186 (18%), Positives = 72/186 (38%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y +I Y + A M+ +G C +T +++ + A +
Sbjct: 262 NAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLV 321
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + +Y ++ + +D L ++ + + Y L+ GYS
Sbjct: 322 HKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKV 381
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
N GA + + ++ I P +LI+A+ ++KA M K+GL P
Sbjct: 382 ENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTY 441
Query: 349 ALILSA 354
+++L
Sbjct: 442 SVLLHG 447
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 72/172 (41%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I GY K + A + + M+ R +VT T+++ +++ + + A E ++
Sbjct: 371 YNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLME 430
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y ++ G + L + + + S +Y ++ GY G+S
Sbjct: 431 KSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSY 490
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A R+ + +G+ P+ I + ++A M +GL+PS
Sbjct: 491 RALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPS 542
>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 95/213 (44%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
+N Y +I G ++++ L M D VT+ ++ SKAG ++ A E
Sbjct: 270 SNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFEL 329
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
F+++K G D +Y ++ RAG LD LL EM+ Y L+ Y
Sbjct: 330 FQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGK 389
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
N A R+F ++ G+ P+ + LI + AG++ A + F+ M+ G P+
Sbjct: 390 WSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVT 449
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGK 380
L++ + + A+E+L ++ G +GK
Sbjct: 450 YNLLIDCLIRAGRFGAAMEYLREMRDAGCQMGK 482
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 89/196 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+ +IH YG+ ++ A TL A + G T + M+ ++ K G+++ ++++
Sbjct: 33 FNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYSSMIQVFMKGGDVQNGLLMYKQML 92
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
D ++ ++ + +A ++ + +M V Y L+R G +
Sbjct: 93 KAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLNVSPDVYTYTILIRSLGTIGRID 152
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
++FE++ G P+ +++A+ AG+ +A FQ M + GL+P +++
Sbjct: 153 AVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTYNILI 212
Query: 353 SACEKENQLNRALEFL 368
A K QL RA +F+
Sbjct: 213 DAFGKTGQLERAFDFV 228
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 99/234 (42%), Gaps = 6/234 (2%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I + K +QN M + F+ D T +++ +KA ++ A F ++
Sbjct: 68 YSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMF 127
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
L D +Y ++ + G +D L M AQ Y +++ + G +
Sbjct: 128 KLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVD 187
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +F+ + G+ PDA +LI+A+ GQ ++A+ R E + +L
Sbjct: 188 EACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRSFTNEVTYNS---LL 244
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREY 406
S+ ++ + +E ++ G +V E T A +RLG VE V + Y
Sbjct: 245 SSLGRKGDIQGLMELFGQMKAKG-LVSNE--LTYAILIERLGWAGRVEDVWQLY 295
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 79/184 (42%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
L +++ + +I ++ K +++ A MK +G D VT +++ +A
Sbjct: 296 LEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRA 355
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
G L A E++ G + +Y +++ +Y + L L EM + V Y
Sbjct: 356 GKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSY 415
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
+L+ G+ G ++ A +F ++ G P+ LLI+ AG+ A + MR
Sbjct: 416 SSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRD 475
Query: 339 AGLE 342
AG +
Sbjct: 476 AGCQ 479
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 104/245 (42%), Gaps = 3/245 (1%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++++ + + Y +I +GK Q++ A + K R F ++VT ++ + G+
Sbjct: 196 MVQKGLQPDAVTYNILIDAFGKTGQLERAFD--FVGKSRSF-TNEVTYNSLLSSLGRKGD 252
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ E F ++K G ++ +Y ++ AG ++ L EM ++
Sbjct: 253 IQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINN 312
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+L S G E A +F+ ++F G+ D +LIN AG+ A M + G
Sbjct: 313 VLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENG 372
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
P+ ++S+ K + L+ A ++++ G + +L F + G +
Sbjct: 373 CAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAI 432
Query: 401 HVLRE 405
+ RE
Sbjct: 433 SLFRE 437
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 56/124 (45%), Gaps = 1/124 (0%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
L + E NI Y +I YGK + A L MK RG + V+ + ++ + KA
Sbjct: 366 LEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKA 425
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
G A F E+K G P + +Y ++ +RAG LREM +G +V
Sbjct: 426 GRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRDAGCQMG-KVT 484
Query: 279 KALL 282
K+LL
Sbjct: 485 KSLL 488
>gi|410110115|gb|AFV61137.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
hederifolia]
Length = 364
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 101/212 (47%), Gaps = 4/212 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+S E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 156 KSIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDR 215
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ + +M++AY RAG++ + LL E+ + + + +L
Sbjct: 216 AAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDTAIHILA 274
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + F MR G P
Sbjct: 275 G---AGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFP 331
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDG 375
+A++L+A K + ++A + ++++ G
Sbjct: 332 DSDVIAIVLNAYGKLQEFDKANDVYMEMQEVG 363
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 102/237 (43%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 56 NTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 115
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 116 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKSIEQNVVTYNSMMMIYGKT 175
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G+E
Sbjct: 176 LEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILF 235
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE +V R+
Sbjct: 236 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGA----GRIEEATYVFRQ 288
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 102/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + MK G + + + + ++ MY + A
Sbjct: 18 FTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEAL 77
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 78 SVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 137
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + ++ Y + +KA Q M+ G+E
Sbjct: 138 ---GDAELFGEAIHLFRLMQRKSIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIE 194
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 195 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRL 254
Query: 403 LRE 405
L E
Sbjct: 255 LHE 257
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 6/130 (4%)
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
YSKA ++ F +K G D +Y +M+ + +A + L+ EM V
Sbjct: 3 YSKAISI------FSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPN 56
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+ Y LL Y N A VF ++ D C ++I+ Y G +++A F
Sbjct: 57 TTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFW 116
Query: 335 NMRKAGLEPS 344
MRK G+EP+
Sbjct: 117 GMRKMGIEPN 126
>gi|410110113|gb|AFV61136.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
filifolia]
Length = 439
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 102/224 (45%), Gaps = 12/224 (5%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 219 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDR 278
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ + +M++AY RAG++ + LL E+ + + + +L
Sbjct: 279 AAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDTAIHILA 337
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + F MR G P
Sbjct: 338 G---AGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKXSNVVEVFDKMRGLGYFP 394
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLA 387
+A++L+A K + ++A D +M +E C +
Sbjct: 395 DSDVIAIVLNAYGKLQEFDKA--------NDVYMEMQEVGCVFS 430
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 102/237 (43%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 119 NTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 178
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 179 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 238
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G+E
Sbjct: 239 LEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILF 298
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE +V R+
Sbjct: 299 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAG----AGRIEEATYVFRQ 351
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 102/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + MK G + + + + ++ MY + A
Sbjct: 81 FTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEAL 140
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 141 SVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 200
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + ++ Y + +KA Q M+ G+E
Sbjct: 201 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIE 257
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 258 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRL 317
Query: 403 LRE 405
L E
Sbjct: 318 LHE 320
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ A + L M++ D V + ++ + K + A F +K
Sbjct: 18 YSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 77
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +M+ + +A + L+ EM V + Y LL Y N
Sbjct: 78 RSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFL 137
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF ++ D C ++I+ Y G +++A F MRK G+EP+
Sbjct: 138 EALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 189
Score = 41.6 bits (96), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 33/183 (18%), Positives = 82/183 (44%), Gaps = 2/183 (1%)
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
F+E++ D+ +Y +++ + + G+ D L++M+ +V +Y L+
Sbjct: 3 FDEMRRRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRK 62
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
+ A +F ++ +G TPD +IN + A ++A + M+ AG+ P+
Sbjct: 63 LCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTS 122
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYG 407
+ +L+ + + AL ++ ++ + + +LG+ +E + + +G
Sbjct: 123 YSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF--WG 180
Query: 408 LRE 410
+R+
Sbjct: 181 MRK 183
>gi|168022838|ref|XP_001763946.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684951|gb|EDQ71350.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 727
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 116/269 (43%), Gaps = 38/269 (14%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
++++ Y +I Y +Q A + + M+ G + T + ++ Y +GN++ AE
Sbjct: 154 IDSSVHAYNNLIRAYIMAQNLQGAVSCVEEMEIEGIFPNAATFSAIISGYGSSGNVEAAE 213
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+ F+ + Y S++ AY +AG ++R E L+ +M+ Q + +Y L+ GY
Sbjct: 214 KWFQRSVSENWNHNVAIYSSIIHAYCKAGNMERAEALVADMEEQGLEATLGLYNILMDGY 273
Query: 286 SM-------------------NGNSEGA-------------QRVFEAIQFA------GIT 307
+ G S A ++ +A++F GIT
Sbjct: 274 ARCHIEAQCLNVFHKLKARIDTGLSPTAVTYGCLINLYTKLGKMMKALEFCKEMKAQGIT 333
Query: 308 PDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
+ ++L++ Y G A++ F++M +AG+EP ++L A K Q+ RA++
Sbjct: 334 LNRNTYSMLVDGYVQLGDFANAFSVFEDMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQL 393
Query: 368 LIDLERDGFMVGKEASCTLAAWFKRLGVV 396
L ++ G + T+ F + G V
Sbjct: 394 LGRMKTRGCSPTIQTYITIIDGFMKTGDV 422
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 100/237 (42%), Gaps = 3/237 (1%)
Query: 163 EESFEANIRDYTKIIHGYGK---KMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
E+ EA + Y ++ GY + + Q N + L A G VT ++ +Y+K G
Sbjct: 256 EQGLEATLGLYNILMDGYARCHIEAQCLNVFHKLKARIDTGLSPTAVTYGCLINLYTKLG 315
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ A E +E+K G L++ +Y +V YV+ G + +M + Y
Sbjct: 316 KMMKALEFCKEMKAQGITLNRNTYSMLVDGYVQLGDFANAFSVFEDMSEAGIEPDWVTYN 375
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
LL+ + + A ++ ++ G +P + +I+ + G + AY M+ A
Sbjct: 376 ILLKAFCKSRQMTRAIQLLGRMKTRGCSPTIQTYITIIDGFMKTGDVRMAYKTVSEMKLA 435
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVV 396
G P+ +I+ + Q++RA + ++E G + TL F +G +
Sbjct: 436 GCRPNATTYNVIMHNLVQLGQIDRAASVIDEMELAGVQPNFRSYTTLMQGFASIGEI 492
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 118/291 (40%), Gaps = 47/291 (16%)
Query: 128 VRFMKPRRADWLAVLKQLKLMEHPLYLQVAELA----LLEESFEANIR----DYTKIIHG 179
+ F K +A + + + M Y+Q+ + A + E+ EA I Y ++
Sbjct: 321 LEFCKEMKAQGITLNRNTYSMLVDGYVQLGDFANAFSVFEDMSEAGIEPDWVTYNILLKA 380
Query: 180 YGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM--YSKAGNLKMAEETFEEIKLLGEP 237
+ K Q+ A L MK RG C T + ++ + K G+++MA +T E+KL G
Sbjct: 381 FCKSRQMTRAIQLLGRMKTRG--CSPTIQTYITIIDGFMKTGDVRMAYKTVSEMKLAGCR 438
Query: 238 LDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM---------- 287
+ +Y ++ V+ G +DR ++ EM+ V Y L++G++
Sbjct: 439 PNATTYNVIMHNLVQLGQIDRAASVIDEMELAGVQPNFRSYTTLMQGFASIGEIGLAFKC 498
Query: 288 -------------------------NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQM 322
G + A V E + FAG+ + + L++ +
Sbjct: 499 LKRVNEITQKPPIISYASLLKACCKAGRMQNAIAVTEEMAFAGVPMNNYIFNTLLDGWAQ 558
Query: 323 AGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
G +AY Q MR+ G P ++AC K + +A E + ++++
Sbjct: 559 RGDMWEAYGIMQKMRQEGFTPDIHSYTSFVNACCKAGDMQKATETIEEMKQ 609
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 69/135 (51%)
Query: 210 VMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQ 269
+++ Y K G+ + A TFE+++ G +Y +++ AY+ A L + EM+ +
Sbjct: 128 LLIHYYGKRGDKRGARVTFEKMRAAGIDSSVHAYNNLIRAYIMAQNLQGAVSCVEEMEIE 187
Query: 270 EVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
++ + + A++ GY +GN E A++ F+ + + + +I+AY AG ++A
Sbjct: 188 GIFPNAATFSAIISGYGSSGNVEAAEKWFQRSVSENWNHNVAIYSSIIHAYCKAGNMERA 247
Query: 330 YTAFQNMRKAGLEPS 344
+M + GLE +
Sbjct: 248 EALVADMEEQGLEAT 262
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 106/248 (42%), Gaps = 3/248 (1%)
Query: 153 YLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMV 212
Y V+E+ L N Y I+H + QI A + + M+ G + + T ++
Sbjct: 426 YKTVSEMKL--AGCRPNATTYNVIMHNLVQLGQIDRAASVIDEMELAGVQPNFRSYTTLM 483
Query: 213 VMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY 272
++ G + +A + + + + + SY S++ A +AG + + EM V
Sbjct: 484 QGFASIGEIGLAFKCLKRVNEITQKPPIISYASLLKACCKAGRMQNAIAVTEEMAFAGVP 543
Query: 273 VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTA 332
+ + ++ LL G++ G+ A + + ++ G TPD +NA AG QKA
Sbjct: 544 MNNYIFNTLLDGWAQRGDMWEAYGIMQKMRQEGFTPDIHSYTSFVNACCKAGDMQKATET 603
Query: 333 FQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEA-SCTLAAWFK 391
+ M++ L+P+ + +++ + +AL +++ G + K C + +
Sbjct: 604 IEEMKQQDLQPNLQTYTILIHGWTSVSHPEKALICYDEMKAAGLIPDKPLYYCIVTSLLS 663
Query: 392 RLGVVEEV 399
+ + E
Sbjct: 664 KAAIARET 671
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 56/137 (40%)
Query: 240 KRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFE 299
+R Y ++ Y + G V +M A + Y L+R Y M N +GA E
Sbjct: 123 ERDYALLIHYYGKRGDKRGARVTFEKMRAAGIDSSVHAYNNLIRAYIMAQNLQGAVSCVE 182
Query: 300 AIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKEN 359
++ GI P+A + +I+ Y +G + A FQ + + I+ A K
Sbjct: 183 EMEIEGIFPNAATFSAIISGYGSSGNVEAAEKWFQRSVSENWNHNVAIYSSIIHAYCKAG 242
Query: 360 QLNRALEFLIDLERDGF 376
+ RA + D+E G
Sbjct: 243 NMERAEALVADMEEQGL 259
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 91/195 (46%)
Query: 182 KKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKR 241
K+ +I E+ M RR + VT V++ K G + A + E++K G
Sbjct: 206 KEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVI 265
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI 301
+Y +++ Y +AG + + + LL+EM A+ ++ + L+ G+ + N A++VFE +
Sbjct: 266 TYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEM 325
Query: 302 QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQL 361
Q G+ P+ LIN G+ +A M GL+P+ +++ K+ L
Sbjct: 326 QRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKML 385
Query: 362 NRALEFLIDLERDGF 376
A E L D+ + G
Sbjct: 386 KEAREMLDDIGKRGL 400
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 92/211 (43%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y II GY K ++ A+ L M + +++T +++ + + N+ A+
Sbjct: 260 FSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAK 319
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+ FEE++ G + +Y S++ G LD L +M + Y AL+ G+
Sbjct: 320 KVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGF 379
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
+ A+ + + I G+ P+ LI+AY AG+ A+ M G+ P+
Sbjct: 380 CKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNV 439
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGF 376
++ +E + A + ++E +G
Sbjct: 440 STYNCLIVGFCREGNVKEARKLAKEMEGNGL 470
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 76/173 (43%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ + N+ Y +I+G ++ A M G + VT ++ + K LK
Sbjct: 328 QGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKE 387
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A E ++I G + ++ +++ AY +AG +D +L M V Y L+
Sbjct: 388 AREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIV 447
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
G+ GN + A+++ + ++ G+ D +L++A G+++KA M
Sbjct: 448 GFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEM 500
>gi|358346363|ref|XP_003637238.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503173|gb|AES84376.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 100/216 (46%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+ E + N Y II+ K ++ A N M RG D VT T ++ K G
Sbjct: 36 MYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGK 95
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
K AEE FE I L + +Y +++ Y + G ++ E++L++M+ + V + +
Sbjct: 96 TKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSS 155
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ GY+ G A V + + P+ + A+LI+ Y AG+ A + M+
Sbjct: 156 IINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRR 215
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
LE S+ ++L+ ++ +++ A +ID+ G
Sbjct: 216 LEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGI 251
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 104/254 (40%), Gaps = 7/254 (2%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y +I G K ++ AE+ L M F+ +T +V YS++ +
Sbjct: 344 NAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIH 403
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++ G L Y +++ + R GM + +V+L EM + + Y AL+RGY
Sbjct: 404 EKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTG 463
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTA----FQNMRKAGLEPS 344
+ E A + + + GI P+ L+ AG ++ M + GL P+
Sbjct: 464 SHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPN 523
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
+++S + + + I++ GF+ + L + + + G + E +L
Sbjct: 524 AATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLN 583
Query: 405 EYGLRETYSKIPGS 418
+ T +IP S
Sbjct: 584 DL---LTKGRIPNS 594
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 118/310 (38%), Gaps = 58/310 (18%)
Query: 154 LQVAELALLE---ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTV 210
+++AEL L + E N+ ++ II+GY KK + A + L M +R + + + +
Sbjct: 131 MELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAI 190
Query: 211 MVVMYSKAGNLKMAEETFEEIK-------------LL----------------------G 235
++ Y KAG +A++ +E+K LL G
Sbjct: 191 LIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKG 250
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN----- 290
D +Y S++ Y + G +++EM + + Y AL++G G
Sbjct: 251 IDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRY 310
Query: 291 ---------------SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
+E A + ++ GI P+A +LI G +KA +A
Sbjct: 311 VCSRMIELGLAPDCKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDE 370
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGV 395
M P+ ++ A + + ++ L+ L G + TL F RLG+
Sbjct: 371 MLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGM 430
Query: 396 VEEVEHVLRE 405
+ + VL E
Sbjct: 431 TRKAKVVLDE 440
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 105/266 (39%), Gaps = 20/266 (7%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+L+ + N Y+ ++ GY K +++ AE L M++ + +T + ++ Y+K G
Sbjct: 105 TILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKG 164
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
L A + E+ + Y ++ Y +AG D + +EM ++ + + ++
Sbjct: 165 MLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFD 224
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
LL G + A+ + + GI PD A LI+ Y G A + Q M++
Sbjct: 225 ILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEK 284
Query: 340 GL--------------------EPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
+ +P C +I + + AL+ L +++ G M
Sbjct: 285 NIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCKTEDALDILNEMKSYGIMPN 344
Query: 380 KEASCTLAAWFKRLGVVEEVEHVLRE 405
L + G VE+ E L E
Sbjct: 345 AVTYNILIGGLCKTGAVEKAESALDE 370
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M G + D VT + ++ + + G L A F E+ +G + SY +++ + ++G
Sbjct: 1 MIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGR 60
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
+ L +M + + ++ G G ++ A+ VFE I + P+ +
Sbjct: 61 VMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSA 120
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFL 368
L++ Y G+ + A Q M K + P+ + I++ K+ L++A++ L
Sbjct: 121 LLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVL 173
>gi|326501502|dbj|BAK02540.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 673
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 78/171 (45%), Gaps = 1/171 (0%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQV-TLTVMVVMYSKAGNLKMAEETFEEIK 232
T +I G ++ AE L G I + ++ Y K G+LK AE +E+
Sbjct: 272 TALISALGIAGRVPEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEHVLDEMS 331
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D+ +Y +V AY RAG + +LL+EM+A V S V+ +L G+ G+ +
Sbjct: 332 ECGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQ 391
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
A V + +G+ PD ++I+ + A F MR G+EP
Sbjct: 392 KAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDVFNRMRGEGIEP 442
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 10/233 (4%)
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
R Y ++ GY K ++NAE+ L M G D+ T +++V Y++AG + A +E
Sbjct: 305 RAYNALLKGYVKIGSLKNAEHVLDEMSECGVAPDEATYSLLVDAYTRAGRWESARILLKE 364
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGE-----VLLREMDAQEVYVGSEVYKALLRGY 285
++ D S V + + AG DRG+ +LREM A V Y ++ +
Sbjct: 365 MEA-----DGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTF 419
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
A VF ++ GI PD LI+A+ G+ A F+ MR++ P
Sbjct: 420 GKYNCLGHAMDVFNRMRGEGIEPDVVTWNTLIDAHCKGGRHDCAMELFKEMRESNCPPGT 479
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
++++ ++ + + +++ G + TL + R G +E
Sbjct: 480 TTYNIMINLLGEQERWVGVETMMSEMKEQGLVPNIITYTTLVDVYGRSGRYKE 532
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 95/230 (41%), Gaps = 3/230 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I +GK + +A + M+ G D VT ++ + K G A E F+E++
Sbjct: 412 YNVMIDTFGKYNCLGHAMDVFNRMRGEGIEPDVVTWNTLIDAHCKGGRHDCAMELFKEMR 471
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
P +Y M+ E ++ EM Q + Y L+ Y +G +
Sbjct: 472 ESNCPPGTTTYNIMINLLGEQERWVGVETMMSEMKEQGLVPNIITYTTLVDVYGRSGRYK 531
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A EA++ G+ P M L+NAY G + A + MR GLE S + ++
Sbjct: 532 EAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLI 591
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
+A ++ ++ A L ++ + F + T K L VE+ + V
Sbjct: 592 NAFGEDRRVVEAFSVLQFMKENDF---RPDVITYTTLMKALIRVEQFDKV 638
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 76/173 (43%), Gaps = 1/173 (0%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D + ++ +++A A E + +G + +++ A AG + E L
Sbjct: 232 DAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGIAGRVPEAEALF 291
Query: 264 REMD-AQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQM 322
E A E+ + Y ALL+GY G+ + A+ V + + G+ PD +LL++AY
Sbjct: 292 LEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEHVLDEMSECGVAPDEATYSLLVDAYTR 351
Query: 323 AGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
AG+ + A + M G++PS + IL+ +A L ++ G
Sbjct: 352 AGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASG 404
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 86/204 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+++I+ G+ + Q A L M G D+ VM+ + K L A + F ++
Sbjct: 377 FSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDVFNRMR 436
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D ++ +++ A+ + G D L +EM G+ Y ++
Sbjct: 437 GEGIEPDVVTWNTLIDAHCKGGRHDCAMELFKEMRESNCPPGTTTYNIMINLLGEQERWV 496
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
G + + ++ G+ P+ L++ Y +G+ ++A + M+ GL+PS ++
Sbjct: 497 GVETMMSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALV 556
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
+A + + AL + + DG
Sbjct: 557 NAYAQRGLADHALNVVKAMRADGL 580
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 72/181 (39%), Gaps = 7/181 (3%)
Query: 232 KLLGEPLDKRS------YGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+LLG+ D R + ++ A+ RA + D LL A + S AL+
Sbjct: 219 RLLGDLRDSRLEPDAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISAL 278
Query: 286 SMNGNSEGAQRVFEAIQFAG-ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
+ G A+ +F AG I P R L+ Y G + A M + G+ P
Sbjct: 279 GIAGRVPEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEHVLDEMSECGVAPD 338
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
+ +L++ A + + A L ++E DG + A F+ G ++ VLR
Sbjct: 339 EATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLR 398
Query: 405 E 405
E
Sbjct: 399 E 399
>gi|115473337|ref|NP_001060267.1| Os07g0615000 [Oryza sativa Japonica Group]
gi|113611803|dbj|BAF22181.1| Os07g0615000 [Oryza sativa Japonica Group]
Length = 259
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 74/156 (47%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L+E NI YT +I+G ++ L M G D++ T ++ Y K N
Sbjct: 86 MLDEGTMPNIFTYTSLINGLCHDDRLPEMTPLLKNMILEGLTPDRIMYTSLIACYCKRSN 145
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+K A E F E+K G D Y ++ Y + +D E+L+ EM+ + + Y
Sbjct: 146 MKKAMEIFREMKNGGISPDTFVYTCLIGGYTKVRAMDFAELLMEEMETKGLTPTVVTYTD 205
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALL 316
L+ GY G+ + A R + + GITPDA++ +L
Sbjct: 206 LIIGYLKTGDEKSAYRTYHNMIQRGITPDAKLSCIL 241
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 86/202 (42%), Gaps = 2/202 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ + ++ Y+ II G+ K + +Q A M G + + T T ++
Sbjct: 51 MIKRGYIPDVVLYSIIIDGFVKALDLQEAFRLYHKMLDEGTMPNIFTYTSLINGLCHDDR 110
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L + + L G D+ Y S++ Y + + + + REM + + VY
Sbjct: 111 LPEMTPLLKNMILEGLTPDRIMYTSLIACYCKRSNMKKAMEIFREMKNGGISPDTFVYTC 170
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ GY+ + A+ + E ++ G+TP LI Y G + AY + NM + G
Sbjct: 171 LIGGYTKVRAMDFAELLMEEMETKGLTPTVVTYTDLIIGYLKTGDEKSAYRTYHNMIQRG 230
Query: 341 LEPSDK--CVALILSACEKENQ 360
+ P K C+ + + + +N
Sbjct: 231 ITPDAKLSCILDLGNDADVDNS 252
>gi|449503427|ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71060, mitochondrial-like [Cucumis sativus]
Length = 542
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 94/214 (43%), Gaps = 1/214 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
++ F+ Y +I GK Q N + MKR+G I + T ++ Y++A +K
Sbjct: 149 QKGFKHTTESYNLLIEALGKIKQFNVIWNLVSDMKRKG-ILSRETFALITRRYARARKVK 207
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A E+FE+++ G + + ++ ++ + + + + +M + Y LL
Sbjct: 208 EAVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILL 267
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G+ + N V+ ++ G PD +LINA+ A + +A F M ++
Sbjct: 268 EGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIK 327
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
PS +++ E +L ALEF L+ GF
Sbjct: 328 PSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGF 361
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 86/187 (45%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F+ + D+ +++ K ++ A+ MK F D + T+++ + + NL
Sbjct: 221 FQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKLN 280
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
E + E++ G D ++G ++ A+ +A D L EM+A+ + V+ L+ G
Sbjct: 281 EVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGL 340
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
+ A FE ++ +G P+A ++ AY + + AY MRK+G+ P+
Sbjct: 341 GSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNS 400
Query: 346 KCVALIL 352
+ +IL
Sbjct: 401 RTYDIIL 407
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 85/249 (34%), Gaps = 71/249 (28%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA------- 218
F+ +I+ YT ++ G+G+ + M+ GF D VT +++ + KA
Sbjct: 256 FKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAI 315
Query: 219 ----------------------------GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAY 250
LK A E FE++KL G + +Y ++V AY
Sbjct: 316 RLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAY 375
Query: 251 VRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFE----------- 299
+ + ++ EM V S Y +L S+ A VF+
Sbjct: 376 CWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPT 435
Query: 300 -------------------AIQF------AGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
AIQ G+ P + + LIN+ + + A T FQ
Sbjct: 436 LSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQ 495
Query: 335 NMRKAGLEP 343
M G+ P
Sbjct: 496 EMLDVGIRP 504
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 99/208 (47%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I +T +I GY ++ + + +RG + + VT +++V + ++G +K+AEE F
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+ G D +YG ++ G L++ + ++ ++ +G +Y ++ G
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G E A +F ++ G+ P+ ++I+ G +A + M + G P+D
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 546
Query: 349 ALILSACEKENQLNRALEFLIDLERDGF 376
++ A ++ L + + + +++ GF
Sbjct: 547 NTLIRAHLRDGDLTASAKLIEEMKSCGF 574
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 91/215 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ NI Y ++ GY + ++ A N L M R D VT T ++ Y
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 383
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ + F I G + +Y +V + ++G + E L +EM + V Y
Sbjct: 384 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 443
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL G NG E A +FE +Q + + M +I G+ + A+ F ++ G
Sbjct: 444 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKG 503
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
++P+ +++S K+ L+ A L +E DG
Sbjct: 504 VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 538
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 107/246 (43%), Gaps = 4/246 (1%)
Query: 157 AELALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMV 212
A ++L +E ++++ Y ++ G K + + L M R + + +T V++
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
Query: 213 VMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY 272
++ K G L+ A E ++E+ G + +Y +++ Y L +L M +
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365
Query: 273 VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTA 332
+ +L++GY M + +VF I G+ +A ++L+ + +G+ + A
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425
Query: 333 FQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKR 392
FQ M G+ P ++L +L +ALE DL++ +G T+ +
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 485
Query: 393 LGVVEE 398
G VE+
Sbjct: 486 GGKVED 491
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/245 (17%), Positives = 102/245 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E + ++ Y I++G + A + L M+ R D T + ++ + G
Sbjct: 184 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGC 243
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A F+E++ G +Y S+V +AG + G +LL++M ++E+ +
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL + G + A +++ + GI+P+ L++ Y M + +A M +
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
P ++ +++ ++ ++ + G + L F + G ++ E
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423
Query: 401 HVLRE 405
+ +E
Sbjct: 424 ELFQE 428
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 34/179 (18%), Positives = 77/179 (43%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
+E + + +I G + ++ A + M G D VT +V ++G+ +A
Sbjct: 154 YEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLAL 213
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+ +++ D +Y +++ + R G +D L +EM+ + + Y +L+RG
Sbjct: 214 DLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL 273
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
G + + + I P+ +L++ + G+ Q+A ++ M G+ P+
Sbjct: 274 CKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/186 (19%), Positives = 72/186 (38%), Gaps = 35/186 (18%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM---------------- 211
AN Y+ ++ G+ + +I+ AE M G + D +T ++
Sbjct: 401 ANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEI 460
Query: 212 ------------VVMYS-------KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVR 252
+VMY+ K G ++ A F + G + +Y M+ +
Sbjct: 461 FEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCK 520
Query: 253 AGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARM 312
G L +LLR+M+ Y L+R + +G+ + ++ E ++ G + DA
Sbjct: 521 KGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASS 580
Query: 313 CALLIN 318
++I+
Sbjct: 581 IKMVID 586
>gi|255660902|gb|ACU25620.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 484
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 113/243 (46%), Gaps = 6/243 (2%)
Query: 141 VLKQLKLMEHPL-YLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR 199
VL K EH L + + E + L FE N + KII G+ ++ +A LL M ++
Sbjct: 18 VLHSAKTSEHALQFFRWVERSNL---FEHNRETHLKIIEILGRASKLNHARCILLDMPKK 74
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G D+ +M+ Y K G ++ + + F++++ LG +SY ++ +R G
Sbjct: 75 GLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFXVILRRGRYMMA 134
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+ +M ++ + + ++ G+ ++G E A R FE ++ I+PD +IN
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMING 194
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
Y + ++A F M+ +EP+ ++ +Q++ AL + +++ GF +
Sbjct: 195 YYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK--GFGIK 252
Query: 380 KEA 382
A
Sbjct: 253 PNA 255
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 8/202 (3%)
Query: 163 EESFEANIRDYT---KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
E E I+ Y +I G+ M + N +L+ G + T VM+ + +G
Sbjct: 108 ELGVERTIKSYNALFXVILRRGRYMMAKRYFNKMLS---EGIEPTRHTFNVMIWGFFLSG 164
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A FE++K D +Y +M+ Y R ++ E EM + + Y
Sbjct: 165 KVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYT 224
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L++GY + A R+ E ++ GI P+A + L+ A + +A + + M
Sbjct: 225 TLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMTEARSILKEMMDK 284
Query: 340 GLEPSDKCV--ALILSACEKEN 359
L P+D + LI S C N
Sbjct: 285 YLAPTDNSIFMRLISSQCNSGN 306
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 1/162 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y +I+GY + +++ AE + MK R VT T ++ Y + A
Sbjct: 184 DVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLV 243
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM-DAQEVYVGSEVYKALLRGYSM 287
EE+K G + +Y +++ A + +L+EM D + ++ L+
Sbjct: 244 EEMKGFGIKPNAITYSTLLPGLCNAEKMTEARSILKEMMDKYLAPTDNSIFMRLISSQCN 303
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
+GN + A V +A+ + +A +LI + AGQ +A
Sbjct: 304 SGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQYDQA 345
>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
Length = 1091
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 91/205 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y I+ GK M+++ M R+G+ VT ++ K+ L+ A + + +
Sbjct: 804 YNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLM 863
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G +YG ++ +++G + E L EM +Y LL G+ + GN+E
Sbjct: 864 SEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTE 923
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
++FE + GI PD + +LI+ AG+ F+ + + GLEP L++
Sbjct: 924 NVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLI 983
Query: 353 SACEKENQLNRALEFLIDLERDGFM 377
K ++ A+ ++++ G +
Sbjct: 984 DGLGKSERIEEAVSLFNEMKKKGII 1008
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 87/203 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ G Q+ AM G+ + V+ T +V + G + A F+E+K
Sbjct: 314 YITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMK 373
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G ++ SY S++ +++A M DR L M+A + + Y +G S
Sbjct: 374 EKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSL 433
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + +E ++ GI PD ++ + +G+ A F ++ G+ P +++
Sbjct: 434 KAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMMI 493
Query: 353 SACEKENQLNRALEFLIDLERDG 375
C K ++ + A+ F D+ G
Sbjct: 494 KCCSKASKADEAMNFFSDMVESG 516
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 88/209 (42%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
A++E+ ++R Y+ ++ +GKK + L M+ RG + + T+ + + +A
Sbjct: 196 AMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAA 255
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
A +++ G D ++ ++ AG L + + +M A + Y
Sbjct: 256 RFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYI 315
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
LL +G+S+ V+ A+ G + +++A G+ +A F M++
Sbjct: 316 TLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEK 375
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFL 368
G+ P ++S K + +RALE
Sbjct: 376 GMSPEQYSYNSLISGFLKADMFDRALELF 404
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 92/242 (38%), Gaps = 35/242 (14%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ YT I G+ + A + L M+ G D VT TV++ + AG L A+ F
Sbjct: 240 NVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVF 299
Query: 229 EEIKLLGEPLDKR-----------------------------------SYGSMVMAYVRA 253
++K + D+ SY ++V A +
Sbjct: 300 WKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQV 359
Query: 254 GMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
G +D + EM + + Y +L+ G+ + A +F + G +P+
Sbjct: 360 GRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTH 419
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
L IN Y +GQS KA +++M+ G+ P +L + +L A +L+
Sbjct: 420 VLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKA 479
Query: 374 DG 375
G
Sbjct: 480 MG 481
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 84/201 (41%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G+ K A M G + T + + Y K+G A + +E +K
Sbjct: 384 YNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMK 443
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D + +++ + +G L + + E+ A V + Y +++ S ++
Sbjct: 444 SKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKAD 503
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A F + +G PD LI+ G+ +A+ F +++ +EP++ +L
Sbjct: 504 EAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLL 563
Query: 353 SACEKENQLNRALEFLIDLER 373
S +E ++ ++ L ++ R
Sbjct: 564 SGLGREGKVKEVMQLLEEMTR 584
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 50/251 (19%), Positives = 99/251 (39%), Gaps = 1/251 (0%)
Query: 155 QVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
QV +L + ++ + N+ + I G G + +++A L M+ G + T ++
Sbjct: 122 QVFDL-MQKQVVKTNVGTFATIFGGVGVEGGLRSAPVALPVMREAGMSLNAYTYNGLIYF 180
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
K+G A E ++ + G R+Y +++A+ + +D LL EM+A+ V
Sbjct: 181 LVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPN 240
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
Y +R + A + ++ +G PD ++I AG+ A F
Sbjct: 241 VYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFW 300
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
M+ + +P +L C +E + DG+ + + ++G
Sbjct: 301 KMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVG 360
Query: 395 VVEEVEHVLRE 405
V+E V E
Sbjct: 361 RVDEALAVFDE 371
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 87/222 (39%), Gaps = 3/222 (1%)
Query: 189 AENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVM 248
A+ +K G D +T T+M+ SKA A F ++ G D + S++
Sbjct: 470 AKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLID 529
Query: 249 AYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITP 308
+ G + L ++ ++ + Y LL G G + ++ E + P
Sbjct: 530 TLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPP 589
Query: 309 DARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFL 368
+ +++ G+ A +M + G P ++ KE +L A
Sbjct: 590 NLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMF 649
Query: 369 IDLERDGFMVGKEAS-CTLAAWFKRLGVVEEVEHVLREYGLR 409
+++ + A+ CT+ F + G+++E H ++EY L+
Sbjct: 650 CQMKK--ILAPDYATLCTILPSFVKNGLMKEALHTVKEYILK 689
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 79/219 (36%), Gaps = 35/219 (15%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L+ E F Y ++ G K ++ +AEN M G + +++ + AGN
Sbjct: 862 LMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGN 921
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ + FE++ G D +SY ++ AG L+ G R++ + VY
Sbjct: 922 TENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNL 981
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPD------------------------------- 309
L+ G + E A +F ++ GI P+
Sbjct: 982 LIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKG 1041
Query: 310 ----ARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
LI Y ++G + AY A+ M G +P+
Sbjct: 1042 WKPSVFTYNALIRGYSVSGSTDNAYAAYGQMIVGGCQPN 1080
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 105/243 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ E + N Y +I G+ K+ I A L M + D ++ S G
Sbjct: 479 MISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGR 538
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ AEE + +++ G D+ +Y ++ Y + G L++ + LLR+M + ++ Y
Sbjct: 539 MEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTD 598
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL GY + + E + +++ +G PD + ++I + + A+ + K G
Sbjct: 599 LLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNG 658
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
L P + ++S K + +A+ L ++ ++G G L F R G +
Sbjct: 659 LVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRAR 718
Query: 401 HVL 403
+V
Sbjct: 719 NVF 721
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 112/261 (42%), Gaps = 4/261 (1%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + N YT ++ GY K + + L +M G D +++ S++ N
Sbjct: 584 MLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSEN 643
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+++A E++ G D Y S++ + +++ LL EM + + G Y A
Sbjct: 644 MEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNA 703
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G+ +G+ A+ VF++I G+ P+ LI+ G A+ ++ M G
Sbjct: 704 LIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRG 763
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+ P ++ + C L +AL ++ G+ TL F + G ++E E
Sbjct: 764 IAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGY-ANVSLFNTLVHGFCKRGKLQETE 822
Query: 401 HVLREYGLRETYSKIPGSRSI 421
+L RE +P ++++
Sbjct: 823 KLLHVMMDREI---VPNAQTV 840
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 102/237 (43%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I+G + + + A N L M G + +++ +SK GN+ +A E
Sbjct: 452 NVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEAL 511
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++ D Y S++ G ++ E ++ + + Y L+ GY
Sbjct: 512 EKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKT 571
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
GN E A ++ + +G+ P+A L+ Y + +K + Q+M +G +P +
Sbjct: 572 GNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIY 631
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+++ + + A L ++E++G + +L + ++ +E+ +L E
Sbjct: 632 GIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDE 688
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 114/266 (42%), Gaps = 10/266 (3%)
Query: 160 ALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
ALL+E + NI Y ++ G+ K+ + A + L M G +++ ++
Sbjct: 334 ALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGL 393
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
K G L A + +E+ +G D +Y ++ + + D LL EM +
Sbjct: 394 CKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNV 453
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
Y ++ G NG S+ A + E + G+ P+A M A LI + G A A +
Sbjct: 454 YSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEK 513
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGV 395
M KA + P C ++ ++ A E+ +++ G + + L + + G
Sbjct: 514 MTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGN 573
Query: 396 VEEVEHVLREY---GLR---ETYSKI 415
+E+ + +LR+ GL+ +TY+ +
Sbjct: 574 LEKADQLLRQMLNSGLKPNADTYTDL 599
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 88/209 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y+ I + K A+ M+RR ++VT VM+ ++G ++ A
Sbjct: 242 DVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFK 301
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
EE+ G D +YG+++ + L + LL EM + VY L+ G+
Sbjct: 302 EEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKE 361
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A + + + AG+ P+ M LI GQ +A + M K GL P
Sbjct: 362 GKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTY 421
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFM 377
++ +++ + A E L ++ G +
Sbjct: 422 NPLMQGHFQQHDKDGAFELLNEMRNSGIL 450
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 89/196 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +++G K +++ A+ L M G + V +V + K G A + +E+
Sbjct: 316 YGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMI 375
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G +K Y +++ + G L R LL+EM + + Y L++G+ + +
Sbjct: 376 SAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKD 435
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
GA + ++ +GI P+ ++IN G+S++A + M GL+P+ A ++
Sbjct: 436 GAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLI 495
Query: 353 SACEKENQLNRALEFL 368
KE ++ A E L
Sbjct: 496 IGHSKEGNISLACEAL 511
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 88/212 (41%), Gaps = 4/212 (1%)
Query: 161 LLEESFEANIR----DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS 216
LL+E + +R Y ++ G+ ++ A L M+ G + + + +M+
Sbjct: 405 LLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLC 464
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
+ G K A EE+ G + Y +++ + + G + L +M V+
Sbjct: 465 QNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLF 524
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
Y +L++G S G E A+ + +Q G+ PD + LI+ Y G +KA + M
Sbjct: 525 CYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQM 584
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFL 368
+GL+P+ +L K N + L
Sbjct: 585 LNSGLKPNADTYTDLLEGYFKSNDYEKVSSIL 616
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/181 (20%), Positives = 84/181 (46%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M+ G + D T + + + KA + A++ FEE++ +++ +Y M+ R+G
Sbjct: 234 MEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGA 293
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
++ EM + + Y AL+ G + A+ + + + +G+ P+ +
Sbjct: 294 VEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGT 353
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
L++ + G++ +A+ + M AG++P+ ++ K QL RA + L ++ + G
Sbjct: 354 LVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVG 413
Query: 376 F 376
Sbjct: 414 L 414
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 93/232 (40%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G K Q+ A L M + G D T ++ + + + A E E++
Sbjct: 386 YDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMR 445
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + SYG M+ + G LL EM ++ + + +Y L+ G+S GN
Sbjct: 446 NSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNIS 505
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A E + A + PD LI G+ ++A + ++K GL P + + ++
Sbjct: 506 LACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLI 565
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
K L +A + L + G + L + + E+V +L+
Sbjct: 566 HGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQ 617
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 81/186 (43%), Gaps = 3/186 (1%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+E E I Y +I G+ + I A N ++ +G + + VT T ++ K G++
Sbjct: 691 KEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDIT 750
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A + ++E+ G D Y + A L++ L EM Y ++ L+
Sbjct: 751 DAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEM-FNRGYANVSLFNTLV 809
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM--RKAG 340
G+ G + +++ + I P+A+ +++ + AG+ +A+ F + +KA
Sbjct: 810 HGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQKKAS 869
Query: 341 LEPSDK 346
+D+
Sbjct: 870 QSATDR 875
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 76/182 (41%), Gaps = 4/182 (2%)
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
D +Y + + A+ +A D + + EM ++ + Y ++ G +G E A
Sbjct: 242 DVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFK 301
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
E + G++PDA L+N + ++A M +GL+P+ ++ KE
Sbjct: 302 EEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKE 361
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE---YGLR-ETYSK 414
+ A + L ++ G K L ++G + +L+E GLR +T++
Sbjct: 362 GKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTY 421
Query: 415 IP 416
P
Sbjct: 422 NP 423
Score = 41.2 bits (95), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 159 LALLEESFE---ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
L L EE F AN+ + ++HG+ K+ ++Q E L M R + + T+ +V +
Sbjct: 788 LFLTEEMFNRGYANVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEF 847
Query: 216 SKAGNLKMAEETFEEIK 232
KAG L A F E++
Sbjct: 848 GKAGKLGEAHRVFAELQ 864
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 60/143 (41%), Gaps = 1/143 (0%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
++L + N YT +I G K I +A + M RG D V+ S A
Sbjct: 723 SILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAA 782
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+L+ A EE+ G + + ++V + + G L E LL M +E+ ++ +
Sbjct: 783 DLEQALFLTEEMFNRGYA-NVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVE 841
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQ 302
++ + G A RVF +Q
Sbjct: 842 KVVSEFGKAGKLGEAHRVFAELQ 864
>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 98/204 (48%), Gaps = 2/204 (0%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
MK GF+ D+VT ++ +Y K+ +K A E E+++ G +Y S++ AY R G+
Sbjct: 130 MKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGL 189
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
L+ L +M + + + Y A+L G+ G E A RVFE ++ AG P+
Sbjct: 190 LEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNA 249
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLI-DLERD 374
LI + G+ + F+ ++ P D L A +N ++ + + +++R
Sbjct: 250 LIKMHGNRGKFAEMMKVFEEIKICCCVP-DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRV 308
Query: 375 GFMVGKEASCTLAAWFKRLGVVEE 398
GF+ ++ TL + + R G ++
Sbjct: 309 GFVPERDTYNTLISAYSRCGSFDQ 332
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 87/198 (43%)
Query: 189 AENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVM 248
AE L +KR+GF D TL M+ +Y + + E +K G +Y S++
Sbjct: 438 AERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTPSLATYNSLMY 497
Query: 249 AYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITP 308
+ ++ +R E +L+E+ A+ + Y ++ Y NG + A +F ++ +G+ P
Sbjct: 498 MHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKEASHIFSEMRESGLIP 557
Query: 309 DARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFL 368
D + +Y ++A M K G +P+ ++ K N+ + A++F+
Sbjct: 558 DVITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSVIDGYCKLNRRDDAIKFI 617
Query: 369 IDLERDGFMVGKEASCTL 386
L + +E C L
Sbjct: 618 SSLHELDPHISREDECRL 635
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 81/183 (44%), Gaps = 1/183 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLL-AMKRRGFICDQVTLTVMVVMYSKAGNL 221
EE + + Y I++ YGK N L MK G + D+ T ++ +
Sbjct: 61 EEGCKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLY 120
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
+ A FE++K +G DK +Y +++ Y ++ + +LREM+ Y +L
Sbjct: 121 EEAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSL 180
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+ Y+ +G E A + + GI D +++ + G+ + A F+ MR AG
Sbjct: 181 ISAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGC 240
Query: 342 EPS 344
+P+
Sbjct: 241 KPN 243
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 64/138 (46%)
Query: 206 VTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLRE 265
V L +V++ SK L AE F E+K G D + +M+ Y R M+ + +L
Sbjct: 420 VLLKTLVLVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNF 479
Query: 266 MDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQ 325
M Y +L+ +S + N E ++ V + I GI PD +I AY G+
Sbjct: 480 MKESGFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGR 539
Query: 326 SQKAYTAFQNMRKAGLEP 343
++A F MR++GL P
Sbjct: 540 MKEASHIFSEMRESGLIP 557
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 80/192 (41%), Gaps = 1/192 (0%)
Query: 208 LTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMD 267
+ V++ M K G + +A + G D +Y S++ A V G ++ ++M+
Sbjct: 1 VAVIINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKME 60
Query: 268 AQEVYVGSEVYKALLRGYSMNGNS-EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
+ Y +L Y G +FE ++ AGI PD LI +
Sbjct: 61 EEGCKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLY 120
Query: 327 QKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
++A F++M+ G P +L K ++ A+E L ++E +G +L
Sbjct: 121 EEAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSL 180
Query: 387 AAWFKRLGVVEE 398
+ + R G++EE
Sbjct: 181 ISAYARDGLLEE 192
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/205 (19%), Positives = 87/205 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E + ++ YT ++ G+ + + ++A M+ G + T ++ M+ G
Sbjct: 200 MVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGK 259
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ FEEIK+ D ++ +++ + + GM + +EM + Y
Sbjct: 260 FAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNT 319
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ YS G+ + A +++ + GITPD ++ A G +++ M+
Sbjct: 320 LISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSEKILAEMQDGM 379
Query: 341 LEPSDKCVALILSACEKENQLNRAL 365
+P++ +L A ++ R L
Sbjct: 380 CKPNELTHCSLLHAYANGKEIGRML 404
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/238 (19%), Positives = 98/238 (41%), Gaps = 6/238 (2%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
NI + +I +G + + +K + D VT ++ ++ + G F
Sbjct: 243 NICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVF 302
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+K +G ++ +Y +++ AY R G D+ + + M + Y A+L +
Sbjct: 303 KEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARG 362
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD--- 345
G E ++++ +Q P+ L++AY + + + + +EP
Sbjct: 363 GLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLL 422
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
K + L+ S C+ + RA ++L+R GF + A + R +V + +L
Sbjct: 423 KTLVLVNSKCDLLLEAERA---FLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEIL 477
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 94/238 (39%), Gaps = 2/238 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I + ++ +G+ MKR GF+ ++ T ++ YS+ G+ A +
Sbjct: 278 DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMY 337
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ + G D +Y +++ A R G+ ++ E +L EM + +LL Y+ N
Sbjct: 338 KRMLDTGITPDLSTYNAVLAALARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYA-N 396
Query: 289 GNSEGAQRVF-EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G G E I I P A + L+ +A AF +++ G P
Sbjct: 397 GKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLLEAERAFLELKRKGFSPDLST 456
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ +++ + + + E L ++ GF +L + E E VL+E
Sbjct: 457 LNAMIAIYGRRQMVTKTNEILNFMKESGFTPSLATYNSLMYMHSQSENFERSEEVLKE 514
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 89/231 (38%), Gaps = 1/231 (0%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
II+ GK+ ++ A + L + + GF D T ++ G + A F++++ G
Sbjct: 4 IINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEEG 63
Query: 236 EPLDKRSYGSMVMAYVRAGM-LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGA 294
+Y ++ Y + GM ++ L M + Y L+ E A
Sbjct: 64 CKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEEA 123
Query: 295 QRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSA 354
VFE ++ G PD L++ Y + + ++A + M G PS ++SA
Sbjct: 124 AAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISA 183
Query: 355 CEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ L A+E + G + + + F R G E V E
Sbjct: 184 YARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEE 234
>gi|296081889|emb|CBI20894.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 120/290 (41%), Gaps = 5/290 (1%)
Query: 92 ISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRF----MKPRRADWLAVLKQLKL 147
ISQ + F +I E+GN+ + + + + KP + + ++K +
Sbjct: 130 ISQVEENGMEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGI 189
Query: 148 MEHPLYLQ-VAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQV 206
P Q + EL +E+ N+R Y ++ + K I A N + M G D V
Sbjct: 190 AGEPEESQKLLELMSQDENVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAV 249
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
T + Y++ G AE E++ ++R+ ++ Y + G + + M
Sbjct: 250 TYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRM 309
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
+ V+ +L++G+ + +G V ++ G+ PD + ++NA+ AG
Sbjct: 310 KDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFM 369
Query: 327 QKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
K F +M KA ++P +++ + + +A E L + + GF
Sbjct: 370 DKCREIFDDMVKARIQPDAHVYSILAKGYVRAGEPEKAEEILNAMIKSGF 419
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 106/245 (43%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
L + + + N R II GY K+ +I+ A + MK G + V ++ + A
Sbjct: 272 LEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDA 331
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
+ E ++ G D ++ +++ A+ AG +D+ + +M + + VY
Sbjct: 332 VDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVY 391
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
L +GY G E A+ + A+ +G P+ + +IN + AG+ + A F+ M +
Sbjct: 392 SILAKGYVRAGEPEKAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRMEYAIKIFEKMCE 451
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
G+ P+ K ++ + Q ++ E L +E K +A ++ G+ +E
Sbjct: 452 CGIAPNLKTFETLIWGYGEARQPWKSEEVLQIMEEFNVQPEKTTLLLVAEAWRATGLKKE 511
Query: 399 VEHVL 403
+L
Sbjct: 512 ANRIL 516
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 76/172 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y I Y + + AE +L M+ ++ T +++ Y K G +K A + +K
Sbjct: 251 YNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMK 310
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
LG + + S++ ++ A D +L M+ V + ++ +S G +
Sbjct: 311 DLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMD 370
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
+ +F+ + A I PDA + ++L Y AG+ +KA M K+G P+
Sbjct: 371 KCREIFDDMVKARIQPDAHVYSILAKGYVRAGEPEKAEEILNAMIKSGFHPN 422
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 60/130 (46%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ + GY + + + AE L AM + GF + V T ++ + AG ++ A + FE++
Sbjct: 391 YSILAKGYVRAGEPEKAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRMEYAIKIFEKMC 450
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +++ +++ Y A + E +L+ M+ V + + G +
Sbjct: 451 ECGIAPNLKTFETLIWGYGEARQPWKSEEVLQIMEEFNVQPEKTTLLLVAEAWRATGLKK 510
Query: 293 GAQRVFEAIQ 302
A R+ A++
Sbjct: 511 EANRILSAVK 520
>gi|410110107|gb|AFV61133.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
brasiliensis]
Length = 382
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 101/212 (47%), Gaps = 4/212 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y +I YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 174 KNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDR 233
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ + +M++AY RAG++ + LL E+ + + + +L
Sbjct: 234 AAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDTAIHILA 292
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + F MR G P
Sbjct: 293 G---AGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYXNVVEVFDKMRGLGYFP 349
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDG 375
+A++L+A K + ++A + ++++ G
Sbjct: 350 DSNVIAVVLNAYGKLQEFDKANDVYMEMQEVG 381
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 102/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + MK G + + + + ++ MY + A
Sbjct: 36 FTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEAL 95
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 96 SVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 155
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + +I Y + +KA Q M+ G+E
Sbjct: 156 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIE 212
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 213 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRL 272
Query: 403 LRE 405
L E
Sbjct: 273 LHE 275
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 102/237 (43%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 74 NTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 133
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 134 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKT 193
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G+E
Sbjct: 194 LEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILF 253
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE +V R+
Sbjct: 254 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGA----GRIEEATYVFRQ 306
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 60/141 (42%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D V + ++ + K + A F +K G D +Y +M+ + +A + L+
Sbjct: 4 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 63
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
EM V + Y LL Y N A VF ++ D C ++I+ Y
Sbjct: 64 SEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 123
Query: 324 GQSQKAYTAFQNMRKAGLEPS 344
G +++A F MRK G+EP+
Sbjct: 124 GMAKEADKLFWGMRKMGIEPN 144
>gi|410110095|gb|AFV61127.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
montevidensis]
Length = 418
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 103/219 (47%), Gaps = 4/219 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 203 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDR 262
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ + +M++AY RAG++ + LL E+ + + + +L
Sbjct: 263 AAMLFQKLRSSGXEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDTAIHILA 321
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + F MR G P
Sbjct: 322 G---AGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFP 378
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEA 382
+A++L+A K + ++A + ++++ G + E
Sbjct: 379 DSDVIAIVLNAYGKLQEFDKANDVYMEMQEVGCVFSDEV 417
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 101/237 (42%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 103 NTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 162
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 163 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 222
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G E
Sbjct: 223 LEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILF 282
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE +V R+
Sbjct: 283 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAG----AGRIEEATYVFRQ 335
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 102/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + MK G + + + + ++ MY + A
Sbjct: 65 FTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTTSYSTLLTMYVENKKFLEAL 124
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 125 SVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 184
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + ++ Y + +KA Q M+ G+E
Sbjct: 185 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIE 241
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 242 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQTMIVAYERAGLVAHAKRL 301
Query: 403 LRE 405
L E
Sbjct: 302 LHE 304
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 75/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ A + L M++ D V + ++ + K + A F +K
Sbjct: 2 YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 61
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +M+ + +A + L+ EM A V + Y LL Y N
Sbjct: 62 RSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTTSYSTLLTMYVENKKFL 121
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF ++ D C ++I+ Y G +++A F MRK G+EP+
Sbjct: 122 EALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 173
>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
Length = 551
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 92/197 (46%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
E ++ Y + G + ++ A+N L M +G + V+ T ++ ++ G++ A
Sbjct: 349 IELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEAR 408
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E+ G +Y M+ Y++ G + E +EM+ + + Y AL+ G+
Sbjct: 409 RLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKGLVPDIYSYAALVHGH 468
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
+NG + A R+FE ++ G P+ LI+ G+S++A+ + NM GL P D
Sbjct: 469 CVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDD 528
Query: 346 KCVALILSACEKENQLN 362
+ ++ + + + N
Sbjct: 529 ALYSALVGSLHTDKKQN 545
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/301 (20%), Positives = 114/301 (37%), Gaps = 27/301 (8%)
Query: 89 KQAISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRF--------------MKPR 134
KQA + P +T + V C S + LL R R
Sbjct: 131 KQAATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTR 190
Query: 135 RADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLL 194
D V + LK+ME+ E E + YT ++ G I E
Sbjct: 191 EKDDDRVAEMLKVMEN-------------EGIEPTVGTYTILVDGLSAARDITKVEAVFE 237
Query: 195 AMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG 254
MK + D + ++ Y +AGN++ A E F+E G ++ +YG+++ + + G
Sbjct: 238 EMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIG 297
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
++ E+L+ +M + V + V+ ++ GY + A + ++ GI D
Sbjct: 298 QMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYN 357
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
L + A + +A + M + G+ P+ ++S E + A ++ +
Sbjct: 358 TLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGN 417
Query: 375 G 375
G
Sbjct: 418 G 418
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 97/206 (47%), Gaps = 3/206 (1%)
Query: 206 VTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLRE 265
++ +V+V Y K+G + A + +E+ G ++ Y S++ AY R DR +L+
Sbjct: 144 LSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKV 203
Query: 266 MDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQ 325
M+ + + Y L+ G S + + VFE ++ ++ D + +INAY AG
Sbjct: 204 MENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGN 263
Query: 326 SQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCT 385
++A F G+EP++ +++ K Q+ A + D++ G + + T
Sbjct: 264 VRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNT 323
Query: 386 LAAWFKRLGVVE---EVEHVLREYGL 408
+ + R +V+ E++ ++ + G+
Sbjct: 324 MIDGYCRKNMVDKALEIKMIMEKMGI 349
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 103/246 (41%), Gaps = 35/246 (14%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
E N Y +I+G+ K Q++ AE + M+ RG +Q+ M+ Y + + A
Sbjct: 279 IEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKAL 338
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM------------------- 266
E ++ +G LD +Y ++ RA +D + LLR M
Sbjct: 339 EIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIH 398
Query: 267 -------DAQEVY-----VGSE----VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDA 310
+A+ ++ G+E Y ++ GY G+ A+R + ++ G+ PD
Sbjct: 399 CNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKGLVPDI 458
Query: 311 RMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLID 370
A L++ + + G+ A F+ M++ G +P+ ++S KE + A + +
Sbjct: 459 YSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDN 518
Query: 371 LERDGF 376
+ DG
Sbjct: 519 MLGDGL 524
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 88/233 (37%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ Y ++ L M+ G T T++V S A ++ E FEE+K
Sbjct: 181 YNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMK 240
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
D Y S++ AY RAG + R + E + Y AL+ G+ G E
Sbjct: 241 SKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQME 300
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ + +Q G+ + + +I+ Y KA M K G+E +
Sbjct: 301 AAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLA 360
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ N+++ A L + G + TL + G + E + RE
Sbjct: 361 CGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFRE 413
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 72/161 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E+ N YT +I + + + A M G VT VM+ Y K G+
Sbjct: 379 MIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGS 438
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ AE +E++ G D SY ++V + G +D L EM + Y A
Sbjct: 439 IREAERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTA 498
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQ 321
L+ G + G SE A ++++ + G+TPD + + L+ +
Sbjct: 499 LISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSLH 539
>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 724
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 116/264 (43%), Gaps = 11/264 (4%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ F+ N+ ++T +I G KK I+ A L M R G+ + T T ++ K G
Sbjct: 301 MIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGW 360
Query: 221 LKMAEETFEEIKLLGEPLDK---RSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
+ A F +KL+ + K +Y SM+ Y + L+R E+L M Q ++
Sbjct: 361 TEKAFRLF--LKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNT 418
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y L+ G+ GN + A + + G P+ +I++ ++ +AY
Sbjct: 419 YTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAF 478
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
GLE +++ K++ + +AL F + + GF + L A F R ++
Sbjct: 479 SCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMK 538
Query: 398 EVEHVLR---EYGL---RETYSKI 415
E E + + GL +ETY+ +
Sbjct: 539 ESERLFQLVVSLGLVPTKETYTSM 562
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 80/198 (40%), Gaps = 1/198 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+E F NI Y +I KK + A L G D VT T+++ K ++K
Sbjct: 444 DEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIK 503
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A F + G D R ++ A+ R + E L + + + + E Y +++
Sbjct: 504 QALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMI 563
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
GY G+ + A + F ++ G PD+ LI+ +A ++ M GL
Sbjct: 564 SGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLS 623
Query: 343 PSDKC-VALILSACEKEN 359
P + V L C++ +
Sbjct: 624 PPEVTRVTLAYEYCKRND 641
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 4/152 (2%)
Query: 161 LLEESF----EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS 216
LL ++F EA+ YT +I K+ I+ A M + GF D +++ +
Sbjct: 473 LLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFC 532
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
+ +K +E F+ + LG K +Y SM+ Y + G D M S
Sbjct: 533 RQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSF 592
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITP 308
Y +L+ G + A +++EA+ G++P
Sbjct: 593 TYGSLISGLCKKSMVDEACKLYEAMIDRGLSP 624
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 77/178 (43%), Gaps = 20/178 (11%)
Query: 219 GNLKMAEE-------TFEEIKLLGEP----LDKRSYG----SMVMAYV-----RAGMLDR 258
GNL+ A E F EI L E +D ++ G S+ M V +G++D
Sbjct: 164 GNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDY 223
Query: 259 GEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLIN 318
E + EM + V S +K ++ G +G + A R + G PD C L+++
Sbjct: 224 AENVFDEMSVRGVCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILS 283
Query: 319 AYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
A G +A F+ M G +P+ ++ K+ + +A E L ++ R+G+
Sbjct: 284 ALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGW 341
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 97/240 (40%), Gaps = 7/240 (2%)
Query: 186 IQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGS 245
I AEN M RG D + +MV+ + G ++ A+ + G D +
Sbjct: 221 IDYAENVFDEMSVRGVCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTL 280
Query: 246 MVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAG 305
++ A G+++R R+M + +L+ G G+ + A + E + G
Sbjct: 281 ILSALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNG 340
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL-EPSDKCVALILSACEKENQLNRA 364
P+ LI+ G ++KA+ F + ++ + +P+ ++ KE++LNRA
Sbjct: 341 WKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRA 400
Query: 365 LEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE---EVEHVLREYGLRE---TYSKIPGS 418
++ G TL + G + E+ +++ + G R TY+ + S
Sbjct: 401 EMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDS 460
>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 6/214 (2%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + +AN+ Y +IH + + A T M G + D VT T ++ SK G
Sbjct: 140 MVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGK 199
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ A + FE + GE + +Y S++ +D L M + + + Y
Sbjct: 200 VQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNT 259
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ GY +G +E A +F +Q+ +TP +L+ A G+ + A F NM+ G
Sbjct: 260 LINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICG 319
Query: 341 LEPS-DKCVALILSACEKENQLNRALEFLIDLER 373
PS D L+ C+ N +E ID+ R
Sbjct: 320 QSPSLDTYTVLLDGLCK-----NGCIEEAIDVFR 348
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 93/217 (42%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
++E + ++ Y +I+GY + + A M+ T T+++ + G
Sbjct: 244 VMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNG 303
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A+E F +++ G+ +Y ++ + G ++ + R + + + +Y
Sbjct: 304 RIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYS 363
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ G E A +F+ I G+ P+ ++IN G+ +A F M ++
Sbjct: 364 ILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEES 423
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
G E + I+ +ENQ+ +A+EFL + F
Sbjct: 424 GCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNF 460
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 110/242 (45%), Gaps = 12/242 (4%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y+ +I+G + +++ A N M +G + +T ++ + G K A TF
Sbjct: 113 NVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTF 172
Query: 229 EEIKLLGEPL--DKRSYGSMVMAYVRAGMLDRG----EVLLREMDAQEVYVGSEVYKALL 282
+ ++GE + D ++ +++ + G + E+++++ +A + Y +LL
Sbjct: 173 SQ--MVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVT----YNSLL 226
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G ++ + A R+FE + GI D LIN Y +G++++A T F+ M+ L
Sbjct: 227 NGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELT 286
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
PS ++L A + ++ A E +++ G + L + G +EE V
Sbjct: 287 PSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDV 346
Query: 403 LR 404
R
Sbjct: 347 FR 348
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 97/244 (39%), Gaps = 8/244 (3%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGF--ICDQVTLTVMVVMYS--KAGNL 221
F+ +I Y +I+ K Q + A + + RR IC T +V+ S K G
Sbjct: 40 FQGDILLYGYLINALRKTRQARRA----VELHRRMLSEICSGNFFTYGLVIDSLCKDGLA 95
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
+ F E+ +G + Y S++ R G L L EM +Q + Y +L
Sbjct: 96 IKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSL 155
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+ G + A R F + GI PD LI+ G+ Q+AY F+ M K G
Sbjct: 156 IHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGE 215
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEH 401
P+ +L+ +Q++ A+ + G + + TL + G EE
Sbjct: 216 APNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMT 275
Query: 402 VLRE 405
+ R+
Sbjct: 276 LFRK 279
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 113/242 (46%), Gaps = 3/242 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+GY + +++ A +T MK R D +T ++ KA + A++ E++
Sbjct: 378 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 437
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G ++ +++ AY R G L++ ++L EM + Y +++ + NG
Sbjct: 438 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 497
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + + + P+A++ +I+AY G + +A+ + M+ G+ PS L++
Sbjct: 498 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 557
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE---EVEHVLREYGLR 409
++Q++ A E + L + + TL + G ++ +++ + +YG++
Sbjct: 558 KGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIK 617
Query: 410 ET 411
T
Sbjct: 618 ST 619
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 107/272 (39%), Gaps = 35/272 (12%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y +I G + + +A M R + + +T M+ + K G+L+
Sbjct: 199 NAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLR 258
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+++ G + +Y ++ RAG + LL EM +Q++ Y L G S N
Sbjct: 259 DQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRN 318
Query: 289 GNSEG-----------------------------------AQRVFEAIQFAGITPDARMC 313
G+S+ A+ V +++ AG+ P +
Sbjct: 319 GDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIY 378
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
LIN Y G+ + A++ F M+ ++P +++ K ++ A + L++++
Sbjct: 379 NTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQD 438
Query: 374 DGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+G E TL + R G +E+ VL E
Sbjct: 439 NGVNPTVETFNTLIDAYGRTGQLEKCFIVLSE 470
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 75/174 (43%)
Query: 198 RRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLD 257
+ G T ++++ K G + +AEE + + G + Y +++ Y + G L+
Sbjct: 333 KNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELE 392
Query: 258 RGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
+M ++ + Y AL+ G AQ + +Q G+ P LI
Sbjct: 393 GAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLI 452
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDL 371
+AY GQ +K + M++ GL+P+ I++A K ++ A+ L D+
Sbjct: 453 DAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDM 506
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 44/242 (18%), Positives = 92/242 (38%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ N Y ++ G + ++ L M + + D T +++ S+ G+ K
Sbjct: 264 HGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKA 323
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
F + G + + ++ + G + E +L+ + + +Y L+
Sbjct: 324 MLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLIN 383
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
GY G EGA F ++ I PD LIN A + A M+ G+ P
Sbjct: 384 GYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNP 443
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+ + ++ A + QL + L +++ +G + ++ F + G + E +L
Sbjct: 444 TVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAIL 503
Query: 404 RE 405
+
Sbjct: 504 DD 505
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 52/122 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I Y +I G + QI AE + ++ I D V+ ++ GN+ A +
Sbjct: 549 SIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQ 608
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ + G R+Y ++ AG L+ E L ++M V + ++ ++ YS
Sbjct: 609 QRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKY 668
Query: 289 GN 290
GN
Sbjct: 669 GN 670
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 88/185 (47%), Gaps = 1/185 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G K +++ + M+ RG + ++ T + ++ Y K G+L+ AE+ + +
Sbjct: 527 YNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRML 586
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + Y ++ +Y ++ +++ + M Q V + + +Y L+ S +GN E
Sbjct: 587 DTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNME 646
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV-ALI 351
A RV I+ G PD + + LI+ +KA+ M K G++P+ C ALI
Sbjct: 647 AAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALI 706
Query: 352 LSACE 356
C+
Sbjct: 707 DGLCK 711
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 89/210 (42%), Gaps = 1/210 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L+ + N Y ++ Y K I+ +T +M +G + D +++ S +GN
Sbjct: 585 MLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGN 644
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ A I+ G D Y S++ + ++ +L EM + V Y A
Sbjct: 645 MEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNA 704
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G +G+ A+ VF +I G+ P+ LI+ G A+ + M G
Sbjct: 705 LIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATG 764
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLID 370
+ P +++ + C L +A+ FLI+
Sbjct: 765 ITPDAFVYSVLTTGCSSAGDLEQAM-FLIE 793
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/207 (19%), Positives = 93/207 (44%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y+ +IHG + + + A + L M +G + ++ Y + GN+ +A E F
Sbjct: 453 NVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIF 512
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+++ + D Y S++ + G ++ +M + + Y L+ GY N
Sbjct: 513 DKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKN 572
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G+ E A+++ + + G+ P+ + L+ +Y + +K + F++M G+ ++
Sbjct: 573 GDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIY 632
Query: 349 ALILSACEKENQLNRALEFLIDLERDG 375
+++ + A L +E++G
Sbjct: 633 GILIHNLSSSGNMEAAFRVLSGIEKNG 659
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 92/208 (44%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y+ +I Y K + A+ L+ M+ RG + VT V++ ++G ++ A
Sbjct: 243 DVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFK 302
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++++ G D +YG+++ ++ + + LL EM E+ VY L+ G+
Sbjct: 303 KDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMRE 362
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
GN++ A ++ + + AG+ P+ L+ GQ +A + M + P
Sbjct: 363 GNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITY 422
Query: 349 ALILSACEKENQLNRALEFLIDLERDGF 376
LI+ + + A L ++E G
Sbjct: 423 NLIIEGHFRHHSKKDAFRLLSEMENAGI 450
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 102/226 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+G K + A+ L M + V ++ + + GN A + +E+
Sbjct: 317 YGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMV 376
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G +K +Y ++V + G +DR +LL++M + Y ++ G+ + + +
Sbjct: 377 AAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKK 436
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A R+ ++ AGI+P+ +++I+ +G+ +KA + M GL+P+ A ++
Sbjct: 437 DAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLI 496
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
S +E ++ A E + + + +L ++G VEE
Sbjct: 497 SGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEE 542
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 79/185 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ +S + Y II G+ + ++A L M+ G + T ++M+ ++G
Sbjct: 410 MVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGE 469
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + EE+ G + Y ++ Y R G + + +M V Y +
Sbjct: 470 PEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNS 529
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G S G E + + F +Q G+ P+ + LI+ Y G + A Q M G
Sbjct: 530 LIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTG 589
Query: 341 LEPSD 345
L+P+D
Sbjct: 590 LKPND 594
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 75/173 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ G K Q+ A L M R D +T +++ + + + K A E++
Sbjct: 387 YDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEME 446
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +Y M+ ++G ++ LL EM + + + VY L+ GY GN
Sbjct: 447 NAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVS 506
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
A +F+ + + PD LI G+ +++ F M++ GL P++
Sbjct: 507 LACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNE 559
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 79/197 (40%), Gaps = 21/197 (10%)
Query: 161 LLEESF---EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSK 217
L+EE F A+I + ++ G+ K+ ++Q L + RG + + +T+ ++ S+
Sbjct: 791 LIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSE 850
Query: 218 AGNLKMAEETFEEIKLLGEPLDKRSYGSMVM------------------AYVRAGMLDRG 259
AG L F E++ R + S+ M + + G LD+
Sbjct: 851 AGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKA 910
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+L + A+ +G Y A++ G A + + + GI P C +L+
Sbjct: 911 LMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICPSENQCLILLTN 970
Query: 320 YQMAGQSQKAYTAFQNM 336
+G Q+ T NM
Sbjct: 971 LHTSGYIQEHNTVLDNM 987
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 95/230 (41%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
++ Y K ++Q+A +L M+ RG ++ +A + + + E + G
Sbjct: 180 LVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAG 239
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
D +Y +++ AY + D + +L EM + + + Y L+ G +G E A
Sbjct: 240 ISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAF 299
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
+ ++ G+ PD LIN + +S +A M A L+P+ A ++
Sbjct: 300 GFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGF 359
Query: 356 EKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+E + A + + ++ G K L ++G ++ +L++
Sbjct: 360 MREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQ 409
>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
Length = 727
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 95/228 (41%), Gaps = 10/228 (4%)
Query: 154 LQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVV 213
++ ++ + E + Y IIHG K Q++ A+ M+ G + D +T M+
Sbjct: 333 VEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLN 392
Query: 214 MYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYV 273
Y KAGNLK A +++ G +Y +++ Y R G L+ L EM Q +
Sbjct: 393 GYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFP 452
Query: 274 GSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDA-----RMCALLINAYQMAGQSQK 328
Y L+ G N A+ F+ + G+ PD R+CA LI G + K
Sbjct: 453 DVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELI-----LGDTHK 507
Query: 329 AYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
A+ + M G+ P +I+ K L A + + + DG
Sbjct: 508 AFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGL 555
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 98/235 (41%), Gaps = 14/235 (5%)
Query: 160 ALLEESFEANIRDYTKIIHG-YGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
L + F N R ++I G K Q++ M +G D VT V++ K
Sbjct: 484 GLQPDCFAYNTRICAELILGDTHKAFQLREV------MMLKGIYPDTVTYNVIIDGLCKT 537
Query: 219 GNLKMAEETFEEIKLLGEPL--DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
GNLK A++ ++K++ + L D +Y ++ A+ G+L LL M + +
Sbjct: 538 GNLKDAKDL--KMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVV 595
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
Y L+ GN A F + GI P+ +LI+A G++ AY F M
Sbjct: 596 TYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEM 655
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFK 391
+ GL P+ L++ +E A+ ++ ++G CT A FK
Sbjct: 656 LERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGI---PPDYCTHNALFK 707
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 88/186 (47%), Gaps = 3/186 (1%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFIC--DQVTLTVMVVMYSKA 218
+L+ E I Y ++ + K+ + A L M+ +G C + VT V++ ++
Sbjct: 234 MLQLEIEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLARE 293
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
G+L+ A + + ++L + +Y ++ A + G + + E L EM+ + + Y
Sbjct: 294 GHLENAAKLVDSMRL-SKKASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTY 352
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
A++ G + E AQ F ++ G+ PD ++N Y AG ++A ++R+
Sbjct: 353 NAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRR 412
Query: 339 AGLEPS 344
AGL P+
Sbjct: 413 AGLAPT 418
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 81/196 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+ Y +I GY + ++ A M +G D T T+++ K NL MA E F
Sbjct: 418 TVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFF 477
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+ G D +Y + + A + G + L M + +Y + Y ++ G
Sbjct: 478 DEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKT 537
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
GN + A+ + + G+ PD LI+A+ G +A M GL+PS
Sbjct: 538 GNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTY 597
Query: 349 ALILSACEKENQLNRA 364
+++ C + L A
Sbjct: 598 TILIHTCCRRGNLYSA 613
>gi|30103011|gb|AAP21424.1| putative pentatricopeptide repeat containing protein [Oryza sativa
Japonica Group]
gi|222626012|gb|EEE60144.1| hypothetical protein OsJ_13038 [Oryza sativa Japonica Group]
gi|374087691|gb|AEY82646.1| chloroplast ALBL [Oryza sativa Japonica Group]
Length = 859
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 105/223 (47%), Gaps = 13/223 (5%)
Query: 152 LYLQVAELA--LLEESFEANIRDYTKIIHG--YGKKMQIQNAENTLLAMKRRGF---ICD 204
+Y V LA ++EE + T+I+ Y + +++ A +++ RRGF + D
Sbjct: 128 MYSDVLALAVTMVEEGVLPDRFLITRILQACAYAEDLELGRALHSMAI--RRGFMGRVKD 185
Query: 205 QVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLR 264
++VMY+K G+L A + F+++ D ++ SM+ Y R+ + LL
Sbjct: 186 VPVGNSVLVMYAKCGDLGWARKVFDKMVCR----DLGTWNSMIFGYCRSAEWEEARHLLD 241
Query: 265 EMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAG 324
M + G + L+ Y+ G+ + A + ++ +G+ PD L++ +
Sbjct: 242 SMRQEGTQPGVVTWNTLISSYARFGDLDVAMELLGQMEESGVAPDVVTWTSLVSGFVHMD 301
Query: 325 QSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
+S +A F MR AG+EP+ +A +SAC LN+A E
Sbjct: 302 RSDEALRCFIRMRLAGVEPNGMSIACAISACASLKLLNQAKEL 344
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 60/138 (43%), Gaps = 4/138 (2%)
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G + + ++ +V MY+K G + A F I D S+ SM+ Y +AG +
Sbjct: 352 GSVNNVLSGNSLVDMYAKCGEIVAAWRIFSGIP----DKDIFSWNSMISGYAQAGYCGKA 407
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
L +M+ V + ++ GY NG+ E A +F+ ++ G+ D +LI
Sbjct: 408 YELFCKMENYGVRRNVITWNTMISGYIRNGDDERAFELFQMMESHGVKRDTATWNILIAG 467
Query: 320 YQMAGQSQKAYTAFQNMR 337
G +A F+ M+
Sbjct: 468 SVHNGYYDRAIRIFRQMQ 485
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 49/250 (19%), Positives = 95/250 (38%), Gaps = 6/250 (2%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
+ +I + +I GY + A M+ G + +T M+ Y + G+ + A E
Sbjct: 385 DKDIFSWNSMISGYAQAGYCGKAYELFCKMENYGVRRNVITWNTMISGYIRNGDDERAFE 444
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
F+ ++ G D ++ ++ V G DR + R+M A +++ ++
Sbjct: 445 LFQMMESHGVKRDTATWNILIAGSVHNGYYDRAIRIFRQMQALLRRPDYITILSIIPAFT 504
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
S + + I + D ++ LINAY +G A F +M + S
Sbjct: 505 NLVASWKVREIHACIFHHNLELDGKIANALINAYSKSGNLASACAVF-DMHSSRNIISWN 563
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREY 406
C+ L A N AL+ ++++G + T+ + G V E +
Sbjct: 564 CIIL---AHVLHGSPNEALDLFCQMKQEGVVPDHTTLVTVIKAYGLTGKVSEGSQTF--F 618
Query: 407 GLRETYSKIP 416
+ Y+ P
Sbjct: 619 NMANDYNITP 628
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 58/134 (43%), Gaps = 5/134 (3%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D ++ YSK+GNL A F+ + + S+ +++A+V G + L
Sbjct: 527 DGKIANALINAYSKSGNLASACAVFD----MHSSRNIISWNCIILAHVLHGSPNEALDLF 582
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGN-SEGAQRVFEAIQFAGITPDARMCALLINAYQM 322
+M + V +++ Y + G SEG+Q F ITP+ A +++
Sbjct: 583 CQMKQEGVVPDHTTLVTVIKAYGLTGKVSEGSQTFFNMANDYNITPELDHYAAMVDLLGR 642
Query: 323 AGQSQKAYTAFQNM 336
+G+ ++AY M
Sbjct: 643 SGRLKEAYELIDEM 656
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 86/183 (46%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ E + Y ++ GY K A + M ++G + D VT T ++ + KAGN
Sbjct: 246 MMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGN 305
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ A +++ G +++ ++ +++ + + G LD + +R M + Y A
Sbjct: 306 LEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNA 365
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ GY M G + A+ + ++ G+ PD + +I+AY + A+ Q M + G
Sbjct: 366 LINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKG 425
Query: 341 LEP 343
+ P
Sbjct: 426 VLP 428
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 89/207 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L+ + N+ + +++G K ++++A M R G D V+ +V Y KAG
Sbjct: 211 MLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGC 270
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A F E+ G D ++ S++ +AG L+ L+R+M + + + + A
Sbjct: 271 SHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTA 330
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G+ G + A ++ I P LIN Y M G+ +A M G
Sbjct: 331 LIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKG 390
Query: 341 LEPSDKCVALILSACEKENQLNRALEF 367
L+P + I+SA K + A E
Sbjct: 391 LKPDVVTYSTIISAYCKNCDTHSAFEL 417
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 89/208 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y ++ + + ++ AE + M G + VT MV KAG ++ A + F
Sbjct: 184 NVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVF 243
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+ G D SY ++V Y +AG + EM + + + +L+
Sbjct: 244 DEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKA 303
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
GN E A + ++ G+ + LI+ + G A A + MR+ ++PS C
Sbjct: 304 GNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCY 363
Query: 349 ALILSACEKENQLNRALEFLIDLERDGF 376
+++ +++ A E L ++E G
Sbjct: 364 NALINGYCMVGRMDEARELLHEMEAKGL 391
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 91/216 (42%), Gaps = 2/216 (0%)
Query: 195 AMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG 254
+M G + T +++ G+ K A +++ G + +Y ++V A+ RAG
Sbjct: 140 SMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAG 199
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
+D E L+ M + + +++ G G E A++VF+ + G+ PD
Sbjct: 200 EVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYN 259
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
L+ Y AG S +A + F M + G+ P ++ K L A+ + +
Sbjct: 260 TLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRER 319
Query: 375 GFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRE 410
G + + L F + G +++ +R G+R+
Sbjct: 320 GLQMNEVTFTALIDGFCKKGFLDDALLAVR--GMRQ 353
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+GY ++ A L M+ +G D VT + ++ Y K + A E +++
Sbjct: 363 YNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQML 422
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y S++ L VL + M + Y +L+ G+ GN E
Sbjct: 423 EKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVE 482
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
A + + + AG+ PD ++LIN + ++ +A
Sbjct: 483 RALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEA 519
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 107/259 (41%), Gaps = 19/259 (7%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ + ++ Y+ II Y K +A M +G + D +T + ++ + + L
Sbjct: 389 KGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSD 448
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F+ + LG D+ +Y S++ + + G ++R L +M V Y L+
Sbjct: 449 AHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLIN 508
Query: 284 GYSMNGNS-EGAQRVFEAIQFAGITPDARMCAL--------------LINAYQMAGQSQK 328
G S + + E Q +F+ I + + AL L+ + M G +
Sbjct: 509 GLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNE 568
Query: 329 AYTAFQNM--RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
A +Q+M R L+ S V LI C N + +AL F + + GF ++ +L
Sbjct: 569 ADKVYQSMLDRNWNLDGSVYSV-LIHGHCRAGNVM-KALSFHKQMLQRGFAPNSTSTISL 626
Query: 387 AAWFKRLGVVEEVEHVLRE 405
G+V E + V+++
Sbjct: 627 IRGLFENGMVVEADQVIQQ 645
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 86/209 (41%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E + N +T +I G+ KK + +A + M++ V ++ Y G +
Sbjct: 318 ERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMD 377
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A E E++ G D +Y +++ AY + L ++M + V + Y +L+
Sbjct: 378 EARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLI 437
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
R A +F+ + G+ PD LI+ + G ++A + M KAG+
Sbjct: 438 RVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVL 497
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDL 371
P +++++ K + A + L L
Sbjct: 498 PDVVTYSVLINGLSKSARAMEAQQLLFKL 526
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 88/204 (43%), Gaps = 28/204 (13%)
Query: 150 HPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLT 209
H L+ + +L L + F YT +I G+ K+ ++ A + M + G + D VT +
Sbjct: 450 HVLFKNMIKLGLQPDEFT-----YTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYS 504
Query: 210 VMVVMYSKAGNLKMAEETFEEIKLLGE-PLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
V++ SK+ A++ KL E P+ + +M R L VL
Sbjct: 505 VLINGLSKSARAMEAQQLL--FKLYHEEPIPANTKYDALMHCCRKAELK--SVL------ 554
Query: 269 QEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
ALL+G+ M G A +V++++ D + ++LI+ + AG K
Sbjct: 555 -----------ALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMK 603
Query: 329 AYTAFQNMRKAGLEP-SDKCVALI 351
A + + M + G P S ++LI
Sbjct: 604 ALSFHKQMLQRGFAPNSTSTISLI 627
Score = 38.5 bits (88), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 35/178 (19%), Positives = 69/178 (38%), Gaps = 1/178 (0%)
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G++ + +++ S A +L A F+ + G + +Y ++ A G
Sbjct: 111 GYVPSVLAYNAVLLALSDA-SLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+LR+M Y L+ + G +GA+R+ + G+ P+ ++N
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNG 229
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
AG+ + A F M + GL P ++ K + AL ++ + G M
Sbjct: 230 MCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIM 287
>gi|242038895|ref|XP_002466842.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
gi|241920696|gb|EER93840.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
Length = 1090
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 105/241 (43%), Gaps = 1/241 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+G+ + +I +A M R+ + T T M+ Y + + A E++
Sbjct: 262 YNTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEME 321
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ G + +Y +++ Y + ML L+ ++ ++ + + + L+ G+ G
Sbjct: 322 ITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEIS 381
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+++ +++ GI PD + LIN + + M+K+G+ P+D ++
Sbjct: 382 KAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLI 441
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRETY 412
K + AL+ +D+ R G + L F R G++ E EH R+Y R
Sbjct: 442 CYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEH-FRQYMSRMNI 500
Query: 413 S 413
S
Sbjct: 501 S 501
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 99/243 (40%), Gaps = 1/243 (0%)
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL 221
L F ++ +++ + + AE+ L MK + + T ++ Y K G
Sbjct: 147 LARKFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMKS-CCLSNSATYNTILHWYVKKGRF 205
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
K A E+++ D +Y M+ R R +LL+ M ++ Y L
Sbjct: 206 KAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECTYNTL 265
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+ G+ G A+ VF + + P +I+ Y + KA + M G+
Sbjct: 266 INGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGV 325
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEH 401
PS+ + +L+ K + L AL+ ++DL+ G + K L F ++G + + +
Sbjct: 326 MPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQ 385
Query: 402 VLR 404
+L+
Sbjct: 386 ILK 388
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 77/166 (46%), Gaps = 8/166 (4%)
Query: 153 YLQVAELA--------LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICD 204
+ QV E++ +LE+ + ++ Y+ +I+G + ++ + L M++ G + +
Sbjct: 374 FCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPN 433
Query: 205 QVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLR 264
V T ++ Y KAG +K+A + F +I G + + +++ A+ R GM+ E +
Sbjct: 434 DVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQ 493
Query: 265 EMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDA 310
M + S + ++ Y G A V++ + G +P+
Sbjct: 494 YMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNV 539
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 90/209 (43%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y ++HGY K+ Q + M R+G D VT ++++ S+ G + +A +
Sbjct: 714 NSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFL 773
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++ L G DK + ++ ++ + L M + S+ + A++ G
Sbjct: 774 EKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRK 833
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
+ + V + G+ P+ L+NA G+ +A+ + M+ G+ P++
Sbjct: 834 NYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAE 893
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFM 377
+ I+ + +L A+ ++ R G +
Sbjct: 894 SSIIRGLCRCGKLEEAVIVFSNMMRSGMV 922
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/239 (17%), Positives = 103/239 (43%), Gaps = 2/239 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+ +E A+ Y +++GY K + + + M + + + +++ Y K G
Sbjct: 671 ICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQ 730
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ ++ + G D +Y +++ G++D L +M + ++ V+
Sbjct: 731 FSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDI 790
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ +S A R+F ++ ++P ++ + +IN +++ M + G
Sbjct: 791 LITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVG 850
Query: 341 LEPSD-KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
L+P+ +AL+ + C + +++RA +++ G + + A ++ R G +EE
Sbjct: 851 LQPNHTHYIALVNAKC-RVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEE 908
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/203 (17%), Positives = 83/203 (40%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +++GY K + A + ++ +K RG ++ T+++ + + G + A++ + +
Sbjct: 332 YSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSML 391
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +++ R + + +L M + +Y L+ Y G +
Sbjct: 392 EDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVK 451
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + F I G+ + + L+ A+ G +A Q M + + + I+
Sbjct: 452 VALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCII 511
Query: 353 SACEKENQLNRALEFLIDLERDG 375
+ ++ A D+ R G
Sbjct: 512 DSYCHRGKIVEAFSVYDDMVRYG 534
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 67/168 (39%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N + II Y + +I A + M R G + T ++ + G+L A++
Sbjct: 503 NSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFM 562
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ + +D++++ ++++ + G LD + +M Y LL G+
Sbjct: 563 FCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRK 622
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
G A + + + G+ PD L+N GQ + A FQ +
Sbjct: 623 GKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEI 670
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 88/230 (38%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
+I + +K ++ NA MK T + M+ + L + E E+ +G
Sbjct: 791 LITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVG 850
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
+ Y ++V A R G +DR L EM A + +++RG G E A
Sbjct: 851 LQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAV 910
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
VF + +G+ P L+++ + A + M L+ ++++
Sbjct: 911 IVFSNMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLKVDVVSYNVLITGL 970
Query: 356 EKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
K+ ++ AL+ +++ G TL G ++ E +L +
Sbjct: 971 CKDKHISDALDLYGEMKSKGLWPNVTTYITLTGAMYSTGRMQNGEELLED 1020
>gi|255578729|ref|XP_002530223.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530270|gb|EEF32170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 97/214 (45%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y +I GY +K + +A +M+ +G + VT ++ + K G L A + F
Sbjct: 250 NDTSYNTLIMGYCRKGLLNSAVKLKNSMRAKGVEANVVTFNSLIDGFCKEGKLHEASKVF 309
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E+K+L + +Y +++ + + G + G L EM V Y AL+ G
Sbjct: 310 SEMKVLNVAPNTITYNTLINGHSQMGNSEMGRRLYEEMSRNGVKADILTYNALILGLCKE 369
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G ++ A + + + + P+A + LI+ + S +A+ +++M + G P+++
Sbjct: 370 GKTKKAAYMVKELDKENLVPNASTFSALISGQCIRNNSDRAFQLYKSMVRIGCHPNEQTF 429
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEA 382
+++SA K A L+++ F G +
Sbjct: 430 NMLVSAFCKNEDFEGAFLVLMEMFERCFTPGSDV 463
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 92/196 (46%), Gaps = 3/196 (1%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
EAN+ + +I G+ K+ ++ A MK + +T ++ +S+ GN +M
Sbjct: 283 EANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNTITYNTLINGHSQMGNSEMGRR 342
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
+EE+ G D +Y ++++ + G + +++E+D + + + + AL+ G
Sbjct: 343 LYEEMSRNGVKADILTYNALILGLCKEGKTKKAAYMVKELDKENLVPNASTFSALISGQC 402
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
+ NS+ A ++++++ G P+ + +L++A+ + A+ M + P
Sbjct: 403 IRNNSDRAFQLYKSMVRIGCHPNEQTFNMLVSAFCKNEDFEGAFLVLMEMFERCFTPGSD 462
Query: 347 CVALI---LSACEKEN 359
++ I L C KE+
Sbjct: 463 VLSEIYHGLCCCGKEH 478
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 87/182 (47%), Gaps = 3/182 (1%)
Query: 198 RRGFICDQVTLTVMVV-MYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGML 256
RR I V MV+ + K+G L+ A + FEE++ +G + SY +++M Y R G+L
Sbjct: 208 RRCRISPNVYTRNMVMRAFCKSGKLEKAVQVFEEMESVGISPNDTSYNTLIMGYCRKGLL 267
Query: 257 DRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALL 316
+ L M A+ V + +L+ G+ G A +VF ++ + P+ L
Sbjct: 268 NSAVKLKNSMRAKGVEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNTITYNTL 327
Query: 317 INAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV-ALILSACEKENQLNRALEFLIDLERDG 375
IN + G S+ ++ M + G++ ALIL C KE + +A + +L+++
Sbjct: 328 INGHSQMGNSEMGRRLYEEMSRNGVKADILTYNALILGLC-KEGKTKKAAYMVKELDKEN 386
Query: 376 FM 377
+
Sbjct: 387 LV 388
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/207 (20%), Positives = 87/207 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ ++ + K +++ A M+ G + + +++ Y + G L A +
Sbjct: 215 NVYTRNMVMRAFCKSGKLEKAVQVFEEMESVGISPNDTSYNTLIMGYCRKGLLNSAVKLK 274
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ G + ++ S++ + + G L + EM V + Y L+ G+S
Sbjct: 275 NSMRAKGVEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNTITYNTLINGHSQM 334
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
GNSE +R++E + G+ D LI G+++KA + + K L P+
Sbjct: 335 GNSEMGRRLYEEMSRNGVKADILTYNALILGLCKEGKTKKAAYMVKELDKENLVPNASTF 394
Query: 349 ALILSACEKENQLNRALEFLIDLERDG 375
+ ++S N +RA + + R G
Sbjct: 395 SALISGQCIRNNSDRAFQLYKSMVRIG 421
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 92/235 (39%), Gaps = 20/235 (8%)
Query: 149 EHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFI------ 202
+H L L+ E + ++ I+H K + ++AE L ++ +GFI
Sbjct: 72 DHVLSLEFFNWVQTENPSSHTLETHSMILHILTKNRKFKSAELILKSVLVKGFIDLPDKL 131
Query: 203 ----------CDQVTLTVMVVMYSKAGNLKM---AEETFEEIKLLGEPLDKRSYGSMVMA 249
CD + V ++ ++K A +TF ++K G S + + +
Sbjct: 132 FEAILYSYRMCDS-SPRVFDSLFKTLAHMKKFRNATDTFLQMKGYGFLPTVESCNAYLSS 190
Query: 250 YVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPD 309
+ +D +EM + ++R + +G E A +VFE ++ GI+P+
Sbjct: 191 LLDLHRVDIALAFYKEMRRCRISPNVYTRNMVMRAFCKSGKLEKAVQVFEEMESVGISPN 250
Query: 310 ARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
LI Y G A +MR G+E + ++ KE +L+ A
Sbjct: 251 DTSYNTLIMGYCRKGLLNSAVKLKNSMRAKGVEANVVTFNSLIDGFCKEGKLHEA 305
>gi|225430029|ref|XP_002281569.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Vitis vinifera]
Length = 635
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 120/290 (41%), Gaps = 5/290 (1%)
Query: 92 ISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRF----MKPRRADWLAVLKQLKL 147
ISQ + F +I E+GN+ + + + + KP + + ++K +
Sbjct: 130 ISQVEENGMEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGI 189
Query: 148 MEHPLYLQ-VAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQV 206
P Q + EL +E+ N+R Y ++ + K I A N + M G D V
Sbjct: 190 AGEPEESQKLLELMSQDENVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAV 249
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
T + Y++ G AE E++ ++R+ ++ Y + G + + M
Sbjct: 250 TYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRM 309
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
+ V+ +L++G+ + +G V ++ G+ PD + ++NA+ AG
Sbjct: 310 KDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFM 369
Query: 327 QKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
K F +M KA ++P +++ + + +A E L + + GF
Sbjct: 370 DKCREIFDDMVKARIQPDAHVYSILAKGYVRAGEPEKAEEILNAMIKSGF 419
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 106/245 (43%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
L + + + N R II GY K+ +I+ A + MK G + V ++ + A
Sbjct: 272 LEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDA 331
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
+ E ++ G D ++ +++ A+ AG +D+ + +M + + VY
Sbjct: 332 VDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVY 391
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
L +GY G E A+ + A+ +G P+ + +IN + AG+ + A F+ M +
Sbjct: 392 SILAKGYVRAGEPEKAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRMEYAIKIFEKMCE 451
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
G+ P+ K ++ + Q ++ E L +E K +A ++ G+ +E
Sbjct: 452 CGIAPNLKTFETLIWGYGEARQPWKSEEVLQIMEEFNVQPEKTTLLLVAEAWRATGLKKE 511
Query: 399 VEHVL 403
+L
Sbjct: 512 ANRIL 516
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 76/172 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y I Y + + AE +L M+ ++ T +++ Y K G +K A + +K
Sbjct: 251 YNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMK 310
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
LG + + S++ ++ A D +L M+ V + ++ +S G +
Sbjct: 311 DLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMD 370
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
+ +F+ + A I PDA + ++L Y AG+ +KA M K+G P+
Sbjct: 371 KCREIFDDMVKARIQPDAHVYSILAKGYVRAGEPEKAEEILNAMIKSGFHPN 422
Score = 38.1 bits (87), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 60/130 (46%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ + GY + + + AE L AM + GF + V T ++ + AG ++ A + FE++
Sbjct: 391 YSILAKGYVRAGEPEKAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRMEYAIKIFEKMC 450
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +++ +++ Y A + E +L+ M+ V + + G +
Sbjct: 451 ECGIAPNLKTFETLIWGYGEARQPWKSEEVLQIMEEFNVQPEKTTLLLVAEAWRATGLKK 510
Query: 293 GAQRVFEAIQ 302
A R+ A++
Sbjct: 511 EANRILSAVK 520
>gi|357449339|ref|XP_003594946.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359380|gb|ABN05846.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483994|gb|AES65197.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 106/244 (43%), Gaps = 1/244 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLL-AMKRRGFICDQVTLTVMVVMYSKAGNL 221
E + + Y ++ YGK + + LL M+ +G D+ T T ++ + G L
Sbjct: 265 ETGLDPTLVTYNVMLDVYGKMGRAWSMILELLDEMRSKGLEFDEFTCTTVISACGREGIL 324
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
A F+++KL G +Y SM+ + +AG+ +L+EM+ + Y L
Sbjct: 325 DEARRFFDDLKLNGYKPGTATYNSMLQVFGKAGVYTEALNILKEMEDNNCEPDAITYNEL 384
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+ Y G + V + + G+ P+A +INAY AG + KA F M++ G
Sbjct: 385 VAAYVRAGFHDEGAAVIDTMASKGVMPNAITYTTVINAYGKAGDADKALEVFGQMKELGC 444
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEH 401
P+ +L K ++ ++ L D++ +G + T+ A G + V
Sbjct: 445 VPNVCTYNNVLVLLGKRSRSEDMIKILCDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQ 504
Query: 402 VLRE 405
VLRE
Sbjct: 505 VLRE 508
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 1/198 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N YT +I+ YGK A MK G + + T ++V+ K + +
Sbjct: 412 NAITYTTVINAYGKAGDADKALEVFGQMKELGCVPNVCTYNNVLVLLGKRSRSEDMIKIL 471
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++KL G P D+ ++ +M+ G +LREM E + L+ Y
Sbjct: 472 CDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQVLREMKNCGFEPDKETFNTLISAYGRC 531
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G+ +++ + AG TP L+NA G + A + +MRK G +P++
Sbjct: 532 GSEVDVAKMYGEMVAAGFTPCITTYNALLNALARRGNWKAAESVVLDMRKKGFKPNETSY 591
Query: 349 ALILSACEKENQLNRALE 366
+L+L K + R LE
Sbjct: 592 SLLLHCYSKAGNV-RGLE 608
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 90/218 (41%), Gaps = 35/218 (16%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ F I Y +++ ++ + AE+ +L M+++GF ++ + ++++ YSKAGN
Sbjct: 544 MVAAGFTPCITTYNALLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLLLHCYSKAGN 603
Query: 221 -----------------------------------LKMAEETFEEIKLLGEPLDKRSYGS 245
LK E F +++ G LD S
Sbjct: 604 VRGLEKVEMEIYDGHVFPSWMLLRTLVLTNYKCRQLKGMERAFHQLQNNGYKLDMVVINS 663
Query: 246 MVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAG 305
M+ +VR L++ +L + + Y +L+ Y+ G+ A+ + + IQ +G
Sbjct: 664 MLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQNSG 723
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
I+PD +I + G Q+A M G++P
Sbjct: 724 ISPDVVSYNTVIKGFCKKGLVQEAIRILSEMTANGVQP 761
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 88/205 (42%), Gaps = 5/205 (2%)
Query: 185 QIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYG 244
Q++ E ++ G+ D V + M+ M+ + L+ A E + I + G + +Y
Sbjct: 638 QLKGMERAFHQLQNNGYKLDMVVINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYN 697
Query: 245 SMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFA 304
S++ Y R G + E +L+++ + Y +++G+ G + A R+ +
Sbjct: 698 SLIDLYARVGDCWKAEEMLKDIQNSGISPDVVSYNTVIKGFCKKGLVQEAIRILSEMTAN 757
Query: 305 GITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
G+ P ++ Y G +A + M + G P++ +++ K + A
Sbjct: 758 GVQPCPITFNTFMSCYAGNGLFAEADEVIRYMIEHGCMPNELTYKIVIDGYIKAKKHKEA 817
Query: 365 LEFL-----IDLERDGFMVGKEASC 384
++F+ ID+ D + K ASC
Sbjct: 818 MDFVSKIKEIDISFDDQSLKKLASC 842
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 95/243 (39%), Gaps = 6/243 (2%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+ + E + Y +++ Y + + M +G + + +T T ++ Y KAG+
Sbjct: 371 DNNCEPDAITYNELVAAYVRAGFHDEGAAVIDTMASKGVMPNAITYTTVINAYGKAGDAD 430
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLR---EMDAQEVYVGSEVYK 279
A E F ++K LG + +Y +++ V G R E +++ +M +
Sbjct: 431 KALEVFGQMKELGCVPNVCTYNNVL---VLLGKRSRSEDMIKILCDMKLNGCPPDRITWN 487
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
+L G + +V ++ G PD LI+AY G + M A
Sbjct: 488 TMLAVCGEKGKQKFVSQVLREMKNCGFEPDKETFNTLISAYGRCGSEVDVAKMYGEMVAA 547
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEV 399
G P +L+A + A ++D+ + GF + + L + + G V +
Sbjct: 548 GFTPCITTYNALLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLLLHCYSKAGNVRGL 607
Query: 400 EHV 402
E V
Sbjct: 608 EKV 610
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 79/203 (38%), Gaps = 36/203 (17%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D ++ MV M + +A + F+ I + LD ++ +++ AY R G R
Sbjct: 201 DDQSVEFMVKMLGRESQYSIASKLFDIIPVEEYSLDVKACTTVLHAYARTGKYKR----- 255
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
A +FE ++ G+ P ++++ Y
Sbjct: 256 ------------------------------AIEIFEKMKETGLDPTLVTYNVMLDVYGKM 285
Query: 324 GQS-QKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEA 382
G++ MR GLE + ++SAC +E L+ A F DL+ +G+ G
Sbjct: 286 GRAWSMILELLDEMRSKGLEFDEFTCTTVISACGREGILDEARRFFDDLKLNGYKPGTAT 345
Query: 383 SCTLAAWFKRLGVVEEVEHVLRE 405
++ F + GV E ++L+E
Sbjct: 346 YNSMLQVFGKAGVYTEALNILKE 368
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 86/183 (46%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ E + Y ++ GY K A + M ++G + D VT T ++ + KAGN
Sbjct: 286 MVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGN 345
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ A +++ G +++ ++ +++ + + G LD + +R M + Y A
Sbjct: 346 LERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNA 405
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ GY M G + A+ + ++ G+ PD + +I+AY + A+ Q M + G
Sbjct: 406 LINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKG 465
Query: 341 LEP 343
+ P
Sbjct: 466 VLP 468
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 88/205 (42%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E + N+ + +++G K ++++A M R G D V+ +V Y KAG
Sbjct: 253 EGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSH 312
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A F E+ G D ++ S++ +AG L+R L+R+M + + + + AL+
Sbjct: 313 EALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALI 372
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G+ G + A ++ I P LIN Y M G+ +A M GL+
Sbjct: 373 DGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLK 432
Query: 343 PSDKCVALILSACEKENQLNRALEF 367
P + I+SA K + A E
Sbjct: 433 PDVVTYSTIISAYCKNCDTHSAFEL 457
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 87/199 (43%), Gaps = 1/199 (0%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
++L + N+ Y ++ + + A + L M+ G + VT +V + +AG
Sbjct: 180 SMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAG 239
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ AE ++ G + ++ SMV +AG ++ + EM + + Y
Sbjct: 240 EVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYN 299
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ GY G S A VF + GI PD LI+ AG ++A T + MR+
Sbjct: 300 TLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRER 359
Query: 340 GLEPSD-KCVALILSACEK 357
GL+ ++ ALI C+K
Sbjct: 360 GLQMNEVTFTALIDGFCKK 378
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 86/204 (42%)
Query: 195 AMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG 254
+M G + T ++V G+ K A +++ G + +Y ++V A+ RAG
Sbjct: 180 SMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAG 239
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
+D E L+ M + + +++ G G E A++VF+ + G+ PD
Sbjct: 240 EVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYN 299
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
L+ Y AG S +A + F M + G+ P ++ K L RA+ + +
Sbjct: 300 TLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRER 359
Query: 375 GFMVGKEASCTLAAWFKRLGVVEE 398
G + + L F + G +++
Sbjct: 360 GLQMNEVTFTALIDGFCKKGFLDD 383
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 83/205 (40%), Gaps = 1/205 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+GY ++ A L M+ +G D VT + ++ Y K + A E +++
Sbjct: 403 YNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQML 462
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y S++ L VL + M + Y +L+ G+ GN E
Sbjct: 463 EKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVE 522
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + + AG+ PD ++LIN + ++ +A + P++ ++
Sbjct: 523 SALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALM 582
Query: 353 SACEKENQLNRALEFLIDLERDGFM 377
C K +L L L G M
Sbjct: 583 HCCRKA-ELKSVLALLKGFCMKGLM 606
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 91/238 (38%), Gaps = 35/238 (14%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ +T +IH K ++ A + M+ RG ++VT T ++ + K G L A
Sbjct: 329 DVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAV 388
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+K Y +++ Y G +D LL EM+A+ + Y ++ Y N
Sbjct: 389 RGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKN 448
Query: 289 GNSEGA----QRVFE------AIQFA-------------------------GITPDARMC 313
++ A Q++ E AI ++ G+ PD
Sbjct: 449 CDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTY 508
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDL 371
LI+ + G + A + M KAG+ P +++++ K + A + L L
Sbjct: 509 TSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKL 566
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 89/204 (43%), Gaps = 28/204 (13%)
Query: 150 HPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLT 209
H L+ + +L L + F YT +I G+ K+ +++A + M + G + D VT +
Sbjct: 490 HVLFKNMIKLGLQPDEFT-----YTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYS 544
Query: 210 VMVVMYSKAGNLKMAEETFEEIKLLGE-PLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
V++ SK+ A++ KL E P+ + +M R L VL
Sbjct: 545 VLINGLSKSARAMEAQQLL--FKLYHEDPIPANTKYDALMHCCRKAELK--SVL------ 594
Query: 269 QEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
ALL+G+ M G A +V++++ D + ++LI+ + AG K
Sbjct: 595 -----------ALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMK 643
Query: 329 AYTAFQNMRKAGLEP-SDKCVALI 351
A + + M + G P S ++LI
Sbjct: 644 ALSFHKQMLQGGFAPNSTSTISLI 667
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 40/206 (19%), Positives = 80/206 (38%), Gaps = 1/206 (0%)
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G++ + +++ S A +L A F+ + G + +Y +V A G
Sbjct: 151 GYVPSVLAYNAVLLALSDA-SLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+LR+M Y L+ + G +GA+R+ ++ G+ P+ ++N
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNG 269
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
AG+ + A F M + GL P ++ K + AL ++ + G M
Sbjct: 270 MCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 329
Query: 380 KEASCTLAAWFKRLGVVEEVEHVLRE 405
+L + G +E ++R+
Sbjct: 330 VVTFTSLIHVMCKAGNLERAVTLVRQ 355
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 106/238 (44%), Gaps = 7/238 (2%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I+GY K ++ A+ L M + D VT + ++ + G + A F
Sbjct: 375 NLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLF 434
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+ G D +Y ++ + + G LD LL+EM + + +Y L+RG +
Sbjct: 435 KEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIA 494
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G E A+ +F + GI PD ++I G S +AY F+ M G P D C
Sbjct: 495 GKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLP-DSCS 553
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREY 406
++ +NQ + LID MVGK S ++ F+ L +E + ++ +
Sbjct: 554 YNVIIQGFLQNQDSSTAIQLIDE-----MVGKRFSAD-SSTFQMLLDLESHDEIISRF 605
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 84/208 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ ++ Y I+HG+ Q+ A M R + D VT ++V K G
Sbjct: 262 MVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGM 321
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A E + G + +Y +++ Y +D +L M + Y
Sbjct: 322 VSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNI 381
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ GY + A+R+ + +TPD + L+ G+ ++A F+ M +G
Sbjct: 382 LINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSG 441
Query: 341 LEPSDKCVALILSACEKENQLNRALEFL 368
L P +++L K L+ AL+ L
Sbjct: 442 LLPDLMAYSILLDGFCKHGHLDEALKLL 469
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 91/218 (41%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+ E+ E N Y ++ GY Q+ A L M +G + + +++ Y K+
Sbjct: 331 TMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSK 390
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ A+ E+ D +Y +++ + G L +EM + + Y
Sbjct: 391 RMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYS 450
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
LL G+ +G+ + A ++ + + I P+ + +LI +AG+ + A F +
Sbjct: 451 ILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSAD 510
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
G+ P +++ KE + A EF +E DGF+
Sbjct: 511 GIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFL 548
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 90/237 (37%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y II K + A L M RG D VT ++ + G L A F
Sbjct: 235 NVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLF 294
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+ D ++ +V + GM+ + M + + Y AL+ GY ++
Sbjct: 295 KEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLH 354
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
+ A +V + G P+ +LIN Y + + +A M + L P
Sbjct: 355 NQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTY 414
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ ++ + + AL ++ G + A L F + G ++E +L+E
Sbjct: 415 STLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKE 471
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 113/242 (46%), Gaps = 3/242 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+GY + +++ A +T MK R D +T ++ KA + A++ E++
Sbjct: 374 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 433
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G ++ +++ AY R G L++ ++L EM + Y +++ + NG
Sbjct: 434 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 493
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + + + P+A++ +I+AY G + +A+ + M+ G+ PS L++
Sbjct: 494 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 553
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE---EVEHVLREYGLR 409
++Q++ A E + L + + TL + G ++ +++ + +YG++
Sbjct: 554 KGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIK 613
Query: 410 ET 411
T
Sbjct: 614 ST 615
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 107/272 (39%), Gaps = 35/272 (12%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y +I G + + +A M R + + +T M+ + K G+L+
Sbjct: 195 NAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLR 254
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+++ G + +Y ++ RAG + LL EM +Q++ Y L G S N
Sbjct: 255 DQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRN 314
Query: 289 GNSEG-----------------------------------AQRVFEAIQFAGITPDARMC 313
G+S+ A+ V +++ AG+ P +
Sbjct: 315 GDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIY 374
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
LIN Y G+ + A++ F M+ ++P +++ K ++ A + L++++
Sbjct: 375 NTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQD 434
Query: 374 DGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+G E TL + R G +E+ VL E
Sbjct: 435 NGVNPTVETFNTLIDAYGRTGQLEKCFIVLSE 466
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 75/174 (43%)
Query: 198 RRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLD 257
+ G T ++++ K G + +AEE + + G + Y +++ Y + G L+
Sbjct: 329 KNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELE 388
Query: 258 RGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
+M ++ + Y AL+ G AQ + +Q G+ P LI
Sbjct: 389 GAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLI 448
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDL 371
+AY GQ +K + M++ GL+P+ I++A K ++ A+ L D+
Sbjct: 449 DAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDM 502
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 44/242 (18%), Positives = 92/242 (38%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ N Y ++ G + ++ L M + + D T +++ S+ G+ K
Sbjct: 260 HGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKA 319
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
F + G + + ++ + G + E +L+ + + +Y L+
Sbjct: 320 MLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLIN 379
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
GY G EGA F ++ I PD LIN A + A M+ G+ P
Sbjct: 380 GYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNP 439
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+ + ++ A + QL + L +++ +G + ++ F + G + E +L
Sbjct: 440 TVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAIL 499
Query: 404 RE 405
+
Sbjct: 500 DD 501
Score = 37.7 bits (86), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 51/122 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I Y +I G + QI AE + ++ I D V+ ++ GN+ A +
Sbjct: 545 SIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQ 604
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ + G R+Y ++ AG L E L ++M V + ++ ++ YS
Sbjct: 605 QRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKY 664
Query: 289 GN 290
GN
Sbjct: 665 GN 666
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 91/204 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+T ++ G+ +K + A N M++RG D VT T ++ +AG LK AE +E++
Sbjct: 358 FTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEME 417
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G +D +Y ++ Y + G + ++ +M + V Y AL G G+
Sbjct: 418 DKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVC 477
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + G+ + LIN AG ++A +M +AGL+P I+
Sbjct: 478 AANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTII 537
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
A + +L+RA L ++ G
Sbjct: 538 GALCQSKELDRAHSLLQEMLDKGI 561
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 94/216 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++++ N+ YT + G K+ + A L M +G + T ++ KAGN
Sbjct: 451 MVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGN 510
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ A T ++ G D +Y +++ A ++ LDR LL+EM + + Y
Sbjct: 511 LEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNV 570
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G+ M+G EG +R+ E + I P+ L+ Y + + ++ M
Sbjct: 571 LMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+ P++ +++ K + AL F ++ GF
Sbjct: 631 VVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGF 666
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 88/211 (41%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
E N YT +I + Q+ +A + M G + D T ++ + + G+L A
Sbjct: 316 LELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAAR 375
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F+E++ G D +Y +++ RAG L E +L+EM+ + + V + Y L+ GY
Sbjct: 376 NWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGY 435
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
G A V + +TP+ L + G A M GLE +
Sbjct: 436 CKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNI 495
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGF 376
+++ K L +A+ +ID++ G
Sbjct: 496 FTYNSLINGLCKAGNLEQAMRTMIDMDEAGL 526
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 106/256 (41%), Gaps = 6/256 (2%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y ++HGY +++ A L M RG + V T ++ + G + A
Sbjct: 284 DVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVV 343
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++ + G LD + +++ + R G L EM + + Y AL+ G
Sbjct: 344 EDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRA 403
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A+RV + ++ G+ DA +LI+ Y G+ +A+ M + + P+
Sbjct: 404 GELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTY 463
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV---LRE 405
+ K+ + A E L ++ G + +L + G +E+ + E
Sbjct: 464 TALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDE 523
Query: 406 YGLRE---TYSKIPGS 418
GL+ TY+ I G+
Sbjct: 524 AGLKPDVYTYTTIIGA 539
>gi|384251704|gb|EIE25181.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
Length = 905
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 95/207 (45%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ YT +I + + A + M+ R + T T ++ + K GN +A +T+
Sbjct: 209 DVYTYTAMISMCIYQQDVDRAMDLAKEMRVRNIERNVHTYTALMNVCIKCGNCPLALDTY 268
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ G + +Y +++ Y + G+ ++G +L M + V Y L+ +M
Sbjct: 269 NHMRQDGACPNVVTYNTLIDVYGKMGLWEQGIKVLTLMKTEGVEPVLRTYNTLIIACNMC 328
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G A V++ + G +P+A LI+AY AGQ K FQ M G E S
Sbjct: 329 GQPREAMAVYKRMLDEGYSPNATTYNALISAYGKAGQLDKVMEVFQEMVHKGCERSVITY 388
Query: 349 ALILSACEKENQLNRALEFLIDLERDG 375
+ ++SACEK Q ALE ++ +G
Sbjct: 389 SSLISACEKAGQWELALELFNEMAGEG 415
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 77/180 (42%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
E E +R Y +I Q + A M G+ + T ++ Y KAG L
Sbjct: 309 EGVEPVLRTYNTLIIACNMCGQPREAMAVYKRMLDEGYSPNATTYNALISAYGKAGQLDK 368
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
E F+E+ G +Y S++ A +AG + L EM + + Y +L+
Sbjct: 369 VMEVFQEMVHKGCERSVITYSSLISACEKAGQWELALELFNEMAGEGCIPNTVTYNSLIT 428
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
+ E A VFE +Q G TPD LI++Y+ GQ ++A A++ MR +P
Sbjct: 429 ACAQGAQWEKASEVFEQMQKGGCTPDVVTFTALISSYEKGGQWRRALGAYEQMRLQRCKP 488
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 8/201 (3%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I YGK + L MK G T +++ + G + A +
Sbjct: 279 NVVTYNTLIDVYGKMGLWEQGIKVLTLMKTEGVEPVLRTYNTLIIACNMCGQPREAMAVY 338
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE----VYKALLRG 284
+ + G + +Y +++ AY +AG LD+ + +EM V+ G E Y +L+
Sbjct: 339 KRMLDEGYSPNATTYNALISAYGKAGQLDKVMEVFQEM----VHKGCERSVITYSSLISA 394
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
G E A +F + G P+ LI A Q +KA F+ M+K G P
Sbjct: 395 CEKAGQWELALELFNEMAGEGCIPNTVTYNSLITACAQGAQWEKASEVFEQMQKGGCTPD 454
Query: 345 DKCVALILSACEKENQLNRAL 365
++S+ EK Q RAL
Sbjct: 455 VVTFTALISSYEKGGQWRRAL 475
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 94/243 (38%), Gaps = 12/243 (4%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ D + H + + +A L F D +++ SKAG A E F
Sbjct: 139 SVEDIVSMCHSLPQSKPVPDAAYQAL------FHFDSRATALLLKDLSKAGLGFRAVEIF 192
Query: 229 EEIKLL--GEPL----DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
E ++ L PL D +Y +M+ + +DR L +EM + + Y AL+
Sbjct: 193 EWLRNLDANHPLASLCDVYTYTAMISMCIYQQDVDRAMDLAKEMRVRNIERNVHTYTALM 252
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
GN A + ++ G P+ LI+ Y G ++ M+ G+E
Sbjct: 253 NVCIKCGNCPLALDTYNHMRQDGACPNVVTYNTLIDVYGKMGLWEQGIKVLTLMKTEGVE 312
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P + ++ AC Q A+ + +G+ L + + + G +++V V
Sbjct: 313 PVLRTYNTLIIACNMCGQPREAMAVYKRMLDEGYSPNATTYNALISAYGKAGQLDKVMEV 372
Query: 403 LRE 405
+E
Sbjct: 373 FQE 375
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 91/195 (46%)
Query: 182 KKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKR 241
K+ +I E+ M RR + VT V++ K G + A + E++K G
Sbjct: 206 KEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVI 265
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI 301
+Y +++ Y +AG + + + LL+EM A+ ++ + L+ G+ + N A++VFE +
Sbjct: 266 TYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEM 325
Query: 302 QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQL 361
Q G+ P+ LIN G+ +A M GL+P+ +++ K+ L
Sbjct: 326 QRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKML 385
Query: 362 NRALEFLIDLERDGF 376
A E L D+ + G
Sbjct: 386 KEAREMLDDIGKRGL 400
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 100/242 (41%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ + N+ Y +I+G ++ A M G + VT ++ + K LK
Sbjct: 328 QGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKE 387
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A E ++I G + ++ +++ AY +AG +D +L M V Y L+
Sbjct: 388 AREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIV 447
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G+ GN + A+++ + ++ G+ D +L++A G+++KA M + GL P
Sbjct: 448 GFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNP 507
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
S ++ +E AL +E+ G L F G +EE +L
Sbjct: 508 SHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLL 567
Query: 404 RE 405
E
Sbjct: 568 NE 569
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 92/211 (43%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y II GY K ++ A+ L M + +++T +++ + + N+ A+
Sbjct: 260 FSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAK 319
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+ FEE++ G + +Y S++ G LD L +M + Y AL+ G+
Sbjct: 320 KVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGF 379
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
+ A+ + + I G+ P+ LI+AY AG+ A+ M G+ P+
Sbjct: 380 CKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNV 439
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGF 376
++ +E + A + ++E +G
Sbjct: 440 STYNCLIVGFCREGNVKEARKLAKEMEGNGL 470
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 79/177 (44%), Gaps = 2/177 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQV-TLTVMVVMYSKAGNLKMAEET 227
N+ + +I YGK ++ +A L +M +C V T ++V + + GN+K A +
Sbjct: 403 NVITFNTLIDAYGKAGRMDDAF-LLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKL 461
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
+E++ G D +Y +V A + G + LL EM + Y AL+ GY
Sbjct: 462 AKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFR 521
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
GNS A V ++ G + +LI + G+ ++A M + GL P+
Sbjct: 522 EGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPN 578
>gi|255551665|ref|XP_002516878.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543966|gb|EEF45492.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 714
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 97/234 (41%), Gaps = 1/234 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ Y K QI+ E MK +G T +++ YS+ ++ EE E++
Sbjct: 371 YNTLMDAYNKSNQIEEVEGIFAEMKAKGLKPTSATFNILMDAYSRRMQPEIVEELLLEMQ 430
Query: 233 LLGEPLDKRSYGSMVMAYVRAG-MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
G D +SY ++ AY R M D M + S Y AL+ YS++G
Sbjct: 431 DAGLQPDAKSYTCLISAYGRQNKMTDMAANAFLRMKKVGIKPTSHSYTALIHAYSVSGWH 490
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALI 351
E A FE +Q GI P L++A++ +G +Q ++ M +E + ++
Sbjct: 491 EKAYSTFENMQTEGIKPSIETYTALLDAFRRSGDTQTLMRIWKMMMSEKVEGTRVTFNIL 550
Query: 352 LSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
L K+ A + + + + G L + R G ++ +L+E
Sbjct: 551 LDGFAKQGHYVEARDVISEFGKLGLHPTVMTYNMLMNAYARGGQHSKLPQLLKE 604
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 81/168 (48%), Gaps = 1/168 (0%)
Query: 195 AMKRRGFICDQVTLTVMVVMYSKAG-NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRA 253
AM+ + D VT ++M+ M K G + K A E FE++ G G++V ++
Sbjct: 287 AMEAQNVSPDHVTCSIMITMMRKNGRSAKEAWEFFEKMNRKGVKWSPEILGALVKSFCDE 346
Query: 254 GMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
G+ + ++ EM + + + VY L+ Y+ + E + +F ++ G+ P +
Sbjct: 347 GLKNEALIIQVEMAKKGAFSNAIVYNTLMDAYNKSNQIEEVEGIFAEMKAKGLKPTSATF 406
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQL 361
+L++AY Q + M+ AGL+P K ++SA ++N++
Sbjct: 407 NILMDAYSRRMQPEIVEELLLEMQDAGLQPDAKSYTCLISAYGRQNKM 454
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 108/249 (43%), Gaps = 7/249 (2%)
Query: 131 MKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQN-A 189
+KP A + ++ P ++ L + + + + + YT +I YG++ ++ + A
Sbjct: 399 LKPTSATFNILMDAYSRRMQPEIVEELLLEMQDAGLQPDAKSYTCLISAYGRQNKMTDMA 458
Query: 190 ENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMA 249
N L MK+ G + T ++ YS +G + A TFE ++ G +Y +++ A
Sbjct: 459 ANAFLRMKKVGIKPTSHSYTALIHAYSVSGWHEKAYSTFENMQTEGIKPSIETYTALLDA 518
Query: 250 YVRAGMLDRGEVLLR--EMDAQEVYVGSEV-YKALLRGYSMNGNSEGAQRVFEAIQFAGI 306
+ R+G + L+R +M E G+ V + LL G++ G+ A+ V G+
Sbjct: 519 FRRSG---DTQTLMRIWKMMMSEKVEGTRVTFNILLDGFAKQGHYVEARDVISEFGKLGL 575
Query: 307 TPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALE 366
P +L+NAY GQ K + M L+P ++ A + RA
Sbjct: 576 HPTVMTYNMLMNAYARGGQHSKLPQLLKEMATLNLKPDSITYLTMIYAYIRVRDFRRAFF 635
Query: 367 FLIDLERDG 375
+ + + G
Sbjct: 636 YHKTMVKSG 644
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 79/165 (47%), Gaps = 6/165 (3%)
Query: 252 RAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDAR 311
+AG D VL + + + VY A L G + A +V+EA++ ++PD
Sbjct: 239 KAGKGDELMVLFMNLPQNKEFRDVHVYNASLSGLLYCQRYDDACKVYEAMEAQNVSPDHV 298
Query: 312 MCALLINAYQMAGQSQK-AYTAFQNMRKAGLEPSDKCV-ALILSACEKENQLNRALEFLI 369
C+++I + G+S K A+ F+ M + G++ S + + AL+ S C+ E N AL +
Sbjct: 299 TCSIMITMMRKNGRSAKEAWEFFEKMNRKGVKWSPEILGALVKSFCD-EGLKNEALIIQV 357
Query: 370 DLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREY---GLRET 411
++ + G TL + + +EEVE + E GL+ T
Sbjct: 358 EMAKKGAFSNAIVYNTLMDAYNKSNQIEEVEGIFAEMKAKGLKPT 402
>gi|357502007|ref|XP_003621292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360248|gb|ABN08261.1| Pentatricopeptide repeat [Medicago truncatula]
gi|355496307|gb|AES77510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 738
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 95/219 (43%), Gaps = 6/219 (2%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E F+ ++ Y + G+ + A + L M+ +G + T +++ AG ++
Sbjct: 463 ERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVE 522
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGE------VLLREMDAQEVYVGSE 276
AEE F +K + Y ++V Y A ++++ +LLR M +
Sbjct: 523 EAEEFFNWLKGESVEISVEIYTALVNGYCEAALIEKSHELKEAFILLRTMLEMNMKPSKV 582
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
+Y + NGN EGA +F G TPDA ++IN Y +A+ F++M
Sbjct: 583 MYSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHELFKDM 642
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
++ G+ P ++++ K N L A E D++ G
Sbjct: 643 KERGITPDAVTYTIMINGYCKMNCLREAHELFKDMKERG 681
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 109/241 (45%), Gaps = 8/241 (3%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
NI + +I+ K ++ A + K G I ++ T T+++ K G+ + F
Sbjct: 189 NILSFNFLINRLVKHDEVDMALCLFVRFKSFGLIFNEYTYTIVIKALCKKGDWENVVRVF 248
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+K G D Y + + + D G +L++ + +V Y A++RG+
Sbjct: 249 DEMKEAGVDDDSYCYATFIEGLCKNNRSDLGYAVLQDYRTRNAHVHKYAYTAVIRGFCNE 308
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
+ A+ VF ++ G+ PD + L++ Y + KA +++M G++ +
Sbjct: 309 TKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGIKTNCVIF 368
Query: 349 ALILSACEKENQLNRALEFLIDL----ERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
+ IL + ++ RALE ++D+ + G + ++A L +LG V++ +L
Sbjct: 369 SCILHCLD---EMGRALE-VVDMFEEFKESGLFIDRKAYNILFDALCKLGKVDDAVGMLD 424
Query: 405 E 405
E
Sbjct: 425 E 425
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 104/255 (40%), Gaps = 4/255 (1%)
Query: 154 LQVAELALLEESFEANIRD---YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTV 210
L AE LE + + D Y ++HGY A +M RG + V +
Sbjct: 311 LDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGIKTNCVIFSC 370
Query: 211 MVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE 270
++ + G + FEE K G +D+++Y + A + G +D +L E+ + +
Sbjct: 371 ILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQ 430
Query: 271 VYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAY 330
+ V + Y L+ GY + G AQ +F+ ++ G PD +L + +A
Sbjct: 431 LDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDFEAM 490
Query: 331 TAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWF 390
M G+EP+ +I+ ++ A EF L+ + + E L +
Sbjct: 491 DLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIYTALVNGY 550
Query: 391 KRLGVVEEVEHVLRE 405
++E+ H L+E
Sbjct: 551 CEAALIEK-SHELKE 564
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 79/191 (41%), Gaps = 16/191 (8%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMV----VMYSKA- 218
ES E ++ YT +++GY + I+ + + FI + L + + VMYSK
Sbjct: 534 ESVEISVEIYTALVNGYCEAALIEKSHEL-----KEAFILLRTMLEMNMKPSKVMYSKIF 588
Query: 219 ------GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY 272
GN++ A F G D +Y M+ Y + L L ++M + +
Sbjct: 589 TALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHELFKDMKERGIT 648
Query: 273 VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTA 332
+ Y ++ GY A +F+ ++ GI PD ++I +G ++ A+
Sbjct: 649 PDAVTYTIMINGYCKMNCLREAHELFKDMKERGIKPDVIAYTVIIKGLLNSGHTEIAFQL 708
Query: 333 FQNMRKAGLEP 343
+ M G+ P
Sbjct: 709 YNEMIDMGMTP 719
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 68/158 (43%), Gaps = 4/158 (2%)
Query: 159 LALLEESFEANIRD----YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
LL E N++ Y+KI ++ A GF D VT T+M+
Sbjct: 566 FILLRTMLEMNMKPSKVMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTIMING 625
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
Y K L A E F+++K G D +Y M+ Y + L L ++M + +
Sbjct: 626 YCKTNCLPEAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREAHELFKDMKERGIKPD 685
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARM 312
Y +++G +G++E A +++ + G+TP A +
Sbjct: 686 VIAYTVIIKGLLNSGHTEIAFQLYNEMIDMGMTPGATL 723
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 84/200 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I KK +N MK G D + K + ++ +
Sbjct: 228 YTIVIKALCKKGDWENVVRVFDEMKEAGVDDDSYCYATFIEGLCKNNRSDLGYAVLQDYR 287
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ K +Y +++ + LD E + EM+ Q + VY AL+ GY + N +
Sbjct: 288 TRNAHVHKYAYTAVIRGFCNETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFD 347
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A V++++ GI + + + +++ G++ + F+ +++GL K ++
Sbjct: 348 KALAVYKSMISRGIKTNCVIFSCILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNILF 407
Query: 353 SACEKENQLNRALEFLIDLE 372
A K +++ A+ L +L+
Sbjct: 408 DALCKLGKVDDAVGMLDELK 427
>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
Length = 694
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 101/220 (45%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + N+ YT ++ G K+ ++ A++ L M+R G +++ T ++ + N
Sbjct: 365 MVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKN 424
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + E+K G LD YG+++ + LD + LL +MD + + +Y
Sbjct: 425 SERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTT 484
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ + G A + I +G+ P+ LI+ AG +A + F MR+ G
Sbjct: 485 IMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELG 544
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGK 380
L+P+ + ++ K L++A+ + ++ G + K
Sbjct: 545 LDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDK 584
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 84/175 (48%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
A++ Y +I+ + K I+ A + MKR G + + VTL+ V + K G ++ A +
Sbjct: 267 ADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKL 326
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
F ++++ G ++ +Y S+V +AG LD VLL EM Q + Y ++ G
Sbjct: 327 FAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCK 386
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G A V ++ AG+ + + LI+ + M S++A M+ G+E
Sbjct: 387 EGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGME 441
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 75/171 (43%)
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
T +++ K G L A F +K +G D +Y S++ Y + G L+ E+L+ EM
Sbjct: 201 TFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEM 260
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
Y AL+ +S G E A F ++ G+ + + ++A+ G
Sbjct: 261 RKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLV 320
Query: 327 QKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
++A F MR G+ P++ ++ K +L+ A+ L ++ G +
Sbjct: 321 REAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLV 371
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 81/197 (41%), Gaps = 12/197 (6%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+ + N+ Y +I G K I A + M+ G + T ++ + K G+L
Sbjct: 507 DSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLS 566
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A E+ G LDK Y S++ +++ G L L +M + + Y +
Sbjct: 567 KAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFI 626
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G+ + A+ V + GITPD LI YQ G ++A ++ QN ++
Sbjct: 627 SGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEA-SSLQNEMES--- 682
Query: 343 PSDKCVALILSACEKEN 359
+LS+C +E+
Sbjct: 683 --------VLSSCTEED 691
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 96/243 (39%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+ E ++ Y +I G K ++ A++ L M G + V T ++ + KAG
Sbjct: 437 NKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKES 496
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A +I G + +Y +++ +AG + +M + +VY L+
Sbjct: 497 EAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLI 556
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G+ G+ A + + G++ D + LI+ + G Q A+ M + GL+
Sbjct: 557 DGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQ 616
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
C +S N + A L ++ G K A L +++LG +EE +
Sbjct: 617 LDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSL 676
Query: 403 LRE 405
E
Sbjct: 677 QNE 679
>gi|357159149|ref|XP_003578355.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Brachypodium distachyon]
Length = 857
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 6/204 (2%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
LY ++ E+ L ++F Y+ +++ GK Q+ A M G + VT ++
Sbjct: 456 LYGRMQEVGLSPDTFT-----YSAMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNII 510
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ + +KA N + + ++++ G DK +Y ++ G LD E + EM ++
Sbjct: 511 IALQAKARNYDNVVKLYRDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMR-RDW 569
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
VY L+ + GN + A + A+ G+ P+ C L++A+ + Q AY+
Sbjct: 570 APDEPVYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAYS 629
Query: 332 AFQNMRKAGLEPSDKCVALILSAC 355
QNM GL PS + L+LS C
Sbjct: 630 VLQNMLAQGLVPSLQTYTLLLSCC 653
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 102/233 (43%), Gaps = 1/233 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +IIH YG+ ++ A M+ G+ D+VT ++ +++KAG L++A + + ++
Sbjct: 402 YNRIIHAYGRANYLREAVKVFEEMEEAGYEPDRVTYCTLIDIHAKAGYLEVAMDLYGRMQ 461
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+G D +Y +MV + G L L EM Y ++ + N +
Sbjct: 462 EVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIIIALQAKARNYD 521
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
+++ +Q AG PD ++++ G +A F MR+ P + L++
Sbjct: 522 NVVKLYRDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRR-DWAPDEPVYGLLV 580
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
K +++AL + + +DG +L + F ++ ++ VL+
Sbjct: 581 DLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAYSVLQN 633
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 92/228 (40%)
Query: 147 LMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQV 206
L +H + L + F+ + YT +I G+ Q N L M R V
Sbjct: 341 LHDHTMALGFFHWLKRQPGFKHDGHTYTTMIGILGQARQFGIMRNLLHEMNRDRCKPTVV 400
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
T ++ Y +A L+ A + FEE++ G D+ +Y +++ + +AG L+ L M
Sbjct: 401 TYNRIIHAYGRANYLREAVKVFEEMEEAGYEPDRVTYCTLIDIHAKAGYLEVAMDLYGRM 460
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
+ + Y A++ G A ++F + G TP+ ++I A
Sbjct: 461 QEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIIIALQAKARNY 520
Query: 327 QKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
+++M+ AG P ++++ L+ A I++ RD
Sbjct: 521 DNVVKLYRDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRRD 568
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 112/284 (39%), Gaps = 18/284 (6%)
Query: 128 VRFMKPRRA--DWLAVLKQLK---LMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGK 182
+R +K RA + L+Q+K + EH L L ++F+AN K++H +
Sbjct: 293 LRSLKSLRAVEQYYHTLQQMKWGPMTEHVL----DSLHCKIDAFQAN--QVLKLLHDHTM 346
Query: 183 KMQIQNAENTLLAMKRR-GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKR 241
+ +KR+ GF D T T M+ + +A + E+
Sbjct: 347 ALGF------FHWLKRQPGFKHDGHTYTTMIGILGQARQFGIMRNLLHEMNRDRCKPTVV 400
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI 301
+Y ++ AY RA L + EM+ Y L+ ++ G E A ++ +
Sbjct: 401 TYNRIIHAYGRANYLREAVKVFEEMEEAGYEPDRVTYCTLIDIHAKAGYLEVAMDLYGRM 460
Query: 302 QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQL 361
Q G++PD + ++N GQ AY F M + G P+ +I++ K
Sbjct: 461 QEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIIIALQAKARNY 520
Query: 362 NRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ ++ D++ GF K + G ++E E V E
Sbjct: 521 DNVVKLYRDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIE 564
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 117/257 (45%), Gaps = 13/257 (5%)
Query: 153 YLQVAELALLEESFEA----NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTL 208
Y+Q + + +E F+ N+ + +I GY + +I A+N M +R D V+
Sbjct: 322 YVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR----DPVSW 377
Query: 209 TVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
M+ YS++G+ A F +++ G L++ S+ S + L+ G+ L +
Sbjct: 378 AAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVK 437
Query: 269 QEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
G V ALL Y G+ E A +F+ + AG D +I Y G +
Sbjct: 438 GGYETGCFVGNALLLMYCKCGSIEEANDLFK--EMAG--KDIVSWNTMIAGYSRHGFGEV 493
Query: 329 AYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD-GFMVGKEASCTLA 387
A F++M++ GL+P D + +LSAC +++ ++ + +D G M + +
Sbjct: 494 ALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMV 553
Query: 388 AWFKRLGVVEEVEHVLR 404
R G++E+ ++++
Sbjct: 554 DLLGRAGLLEDAHNLMK 570
>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g31840
gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 840
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 103/240 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ + +I+G+ K+ ++ A + M++RG D + + ++ Y KAG L M + F
Sbjct: 285 NVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLF 344
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ G LD + S + YV++G L V+ + M Q + Y L++G +
Sbjct: 345 SQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQD 404
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G A ++ I G+ P + LI+ + G + + +++M K G P
Sbjct: 405 GRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIY 464
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGL 408
+++ K+ + A+ F + + + +L + RL +E V R G+
Sbjct: 465 GVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGI 524
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 93/214 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + N+ YT +I G + +I A + +RG VT + ++ + K GN
Sbjct: 382 MLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGN 441
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ +E++ +G P D YG +V + G++ +M Q + + V+ +
Sbjct: 442 LRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNS 501
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G+ + A +VF + GI PD ++ M G+ ++A F M K G
Sbjct: 502 LIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMG 561
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
LEP ++ A K + L+ ++R+
Sbjct: 562 LEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRN 595
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 128/318 (40%), Gaps = 29/318 (9%)
Query: 45 WSRSLRSGPALEAIKAEDMGKTQVKDDTSMFTWIQIGPNITEEQKQAISQFPRKMTKRCK 104
W R R AL+ + MG +K D + FT + + ++A+ F R
Sbjct: 506 WCRLNRFDEALKVFRL--MGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFK---- 559
Query: 105 AFVKQIICVSPETGNLSDLLAAWVRFMKP----------RRADWLAVLKQLKLMEHPLY- 153
+ + P+ L+ A+ + MKP +R A + ++ H L+
Sbjct: 560 ------MGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFK 613
Query: 154 LQVAELA------LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVT 207
E A L+E E +I Y +I GY ++ AE +K F + VT
Sbjct: 614 CHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVT 673
Query: 208 LTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMD 267
LT+++ + K ++ A F + G + +YG ++ + ++ ++ L EM
Sbjct: 674 LTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQ 733
Query: 268 AQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQ 327
+ + Y ++ G G + A +F A + PD A+LI Y G+
Sbjct: 734 EKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLV 793
Query: 328 KAYTAFQNMRKAGLEPSD 345
+A +++M + G++P D
Sbjct: 794 EAALLYEHMLRNGVKPDD 811
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 84/184 (45%), Gaps = 1/184 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E F I K++ G QI+ A L + G + VT ++ + K G
Sbjct: 243 VMERGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGE 301
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + F+ ++ G D +Y +++ Y +AGML G L + + V + V+ +
Sbjct: 302 MDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSS 361
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+ Y +G+ A V++ + GI+P+ +LI G+ +A+ + + K G
Sbjct: 362 TIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRG 421
Query: 341 LEPS 344
+EPS
Sbjct: 422 MEPS 425
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 97/238 (40%), Gaps = 8/238 (3%)
Query: 131 MKPRRADWLAVLKQLKL---MEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQ 187
+KP A + V++ + +E L+L + + E + Y +I + K M+
Sbjct: 527 IKPDVATFTTVMRVSIMEGRLEEALFLF---FRMFKMGLEPDALAYCTLIDAFCKHMKPT 583
Query: 188 NAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE-IKLLGEPLDKRSYGSM 246
M+R D V++ + K ++ A + F I+ EP D +Y +M
Sbjct: 584 IGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEP-DIVTYNTM 642
Query: 247 VMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGI 306
+ Y LD E + + + L+ N + +GA R+F + G
Sbjct: 643 ICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGS 702
Query: 307 TPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
P+A L++ + + + ++ F+ M++ G+ PS ++I+ K +++ A
Sbjct: 703 KPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEA 760
>gi|255660886|gb|ACU25612.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 484
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 113/243 (46%), Gaps = 6/243 (2%)
Query: 141 VLKQLKLMEHPL-YLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR 199
VL K EH L + + E + L FE N + KII G+ ++ +A LL M ++
Sbjct: 18 VLHSSKTSEHALQFFRWVERSNL---FEHNRETHLKIIEILGRASKLNHARCILLDMPKK 74
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G D+ +M+ Y K G ++ + + F++++ LG +SY ++ +R G
Sbjct: 75 GLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMA 134
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+ +M ++ + + ++ G+ ++G E A R FE ++ I+PD +IN
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMING 194
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
Y + ++A F M+ +EP+ ++ +Q++ AL + +++ GF +
Sbjct: 195 YYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK--GFGIK 252
Query: 380 KEA 382
A
Sbjct: 253 PNA 255
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 8/202 (3%)
Query: 163 EESFEANIRDYT---KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
E E I+ Y K+I G+ M + N +L+ G + T VM+ + +G
Sbjct: 108 ELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLS---EGIEPTRHTFNVMIWGFFLSG 164
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A FE++K D +Y +M+ Y R ++ E EM + + Y
Sbjct: 165 KVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYT 224
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L++GY + A R+ E ++ GI P+A + L+ A + +A + M
Sbjct: 225 TLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDK 284
Query: 340 GLEPSDKCV--ALILSACEKEN 359
L P+D + LI S C+ N
Sbjct: 285 YLAPTDNSIFMRLISSHCKSGN 306
>gi|10177016|dbj|BAB10204.1| maize crp1 protein-like [Arabidopsis thaliana]
Length = 680
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 92/202 (45%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ E +++ II G+ K A L + G TL ++ + +G
Sbjct: 234 DKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLE 293
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
AE FEE++ G R+Y +++ YV+ G L E ++ EM+ + V Y L+
Sbjct: 294 AEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLID 353
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
Y G E A+ V + ++ + P++ + + L+ ++ G+ QK + + M+ G++P
Sbjct: 354 AYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKP 413
Query: 344 SDKCVALILSACEKENQLNRAL 365
+ +++ K N L+ A+
Sbjct: 414 DRQFYNVVIDTFGKFNCLDHAM 435
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 102/233 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I +GK + +A T M G D+VT ++ + K G +AEE FE ++
Sbjct: 418 YNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAME 477
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G +Y M+ +Y D + LL +M +Q + + L+ Y +G
Sbjct: 478 RRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFN 537
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A E ++ G+ P + M LINAY G S++A AF+ M GL+PS + ++
Sbjct: 538 DAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLI 597
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+A ++ + A L ++ +G TL R+ ++V V E
Sbjct: 598 NAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEE 650
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 2/162 (1%)
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
Y K G LK AE E++ G D+ +Y ++ AYV AG + ++L+EM+A +V
Sbjct: 320 YVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPN 379
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
S V+ LL G+ G + +V + ++ G+ PD + ++I+ + A T F
Sbjct: 380 SFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFD 439
Query: 335 NMRKAGLEPSDKCVALILSACE-KENQLNRALEFLIDLERDG 375
M G+EP D+ L C K + A E +ER G
Sbjct: 440 RMLSEGIEP-DRVTWNTLIDCHCKHGRHIVAEEMFEAMERRG 480
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 8/210 (3%)
Query: 163 EESFEANIR--------DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
EE FEA R Y +I+ YG + + + + L MK +G + + VT T +V +
Sbjct: 470 EEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDV 529
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
Y K+G A E EE+K +G Y +++ AY + G+ ++ R M + +
Sbjct: 530 YGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPS 589
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+L+ + + A V + ++ G+ PD L+ A + QK ++
Sbjct: 590 LLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYE 649
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRA 364
M +G +P K +++ SA Q RA
Sbjct: 650 EMIMSGCKPDRKARSMLRSALRYMKQTLRA 679
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 80/183 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L E E + + +I + K + AE AM+RRG + T +M+ Y
Sbjct: 441 MLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQER 500
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ ++K G + ++ ++V Y ++G + L EM + + S +Y A
Sbjct: 501 WDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNA 560
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ Y+ G SE A F + G+ P LINA+ + +A+ Q M++ G
Sbjct: 561 LINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENG 620
Query: 341 LEP 343
++P
Sbjct: 621 VKP 623
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/215 (18%), Positives = 96/215 (44%), Gaps = 2/215 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLL--AMKRRGFICDQVTLTVMVVMYSKAGN 220
++ ++++ +Y+ +I + +I + L ++R D + +++ ++K+G+
Sbjct: 196 QDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGD 255
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A + + G + S++ A +G E L E+ + + Y A
Sbjct: 256 PSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNA 315
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL+GY G + A+ + ++ G++PD +LLI+AY AG+ + A + M
Sbjct: 316 LLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGD 375
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
++P+ + +L+ + + + L +++ G
Sbjct: 376 VQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIG 410
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 100/235 (42%), Gaps = 2/235 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK--MAEETFEE 230
Y +I + I+ A N + M++ G+ D V ++++ +++ + M ++E
Sbjct: 171 YNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKE 230
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
I+ LD + ++M + ++G + LL A + + +++ + +G
Sbjct: 231 IERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGR 290
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
+ A+ +FE ++ +GI P R L+ Y G + A + M K G+ P + +L
Sbjct: 291 TLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSL 350
Query: 351 ILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A + A L ++E L A F+ G ++ VL+E
Sbjct: 351 LIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKE 405
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/284 (19%), Positives = 114/284 (40%), Gaps = 39/284 (13%)
Query: 160 ALLEESFEANI----RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
AL EE ++ I R Y ++ GY K +++AE+ + M++RG D+ T ++++ Y
Sbjct: 296 ALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAY 355
Query: 216 SKAGNLKMA--------------------------------EETFE---EIKLLGEPLDK 240
AG + A ++TF+ E+K +G D+
Sbjct: 356 VNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDR 415
Query: 241 RSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEA 300
+ Y ++ + + LD M ++ + + L+ + +G A+ +FEA
Sbjct: 416 QFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEA 475
Query: 301 IQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQ 360
++ G P A ++IN+Y + M+ G+ P+ ++ K +
Sbjct: 476 MERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGR 535
Query: 361 LNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
N A+E L +++ G L + + G+ E+ + R
Sbjct: 536 FNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFR 579
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/204 (18%), Positives = 85/204 (41%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+++++ G+ + + Q L MK G D+ V++ + K L A TF+ +
Sbjct: 383 FSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRML 442
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D+ ++ +++ + + G E + M+ + + Y ++ Y +
Sbjct: 443 SEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWD 502
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
+R+ ++ GI P+ L++ Y +G+ A + M+ GL+PS ++
Sbjct: 503 DMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALI 562
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
+A + +A+ + DG
Sbjct: 563 NAYAQRGLSEQAVNAFRVMTSDGL 586
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 135/354 (38%), Gaps = 38/354 (10%)
Query: 11 RSYSAYQVFDEITAPKPGLRLSWRNLSLHRKPAKWSRSLRSGPALEAIKAE-------DM 63
R AYQ+FD+ T L P S + G LE E DM
Sbjct: 767 RELYAYQIFDKFTK------------KLGISPTLASYNCLIGELLEVHYTEKAWDLFKDM 814
Query: 64 GKTQVKDDTSMFTWIQIGPNITEEQKQAISQFPRKMTKRCK--AFVKQIICVSPETGNLS 121
D F + + + + + +++RCK A I+ S N
Sbjct: 815 KNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSN-- 872
Query: 122 DLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEES---FE--------ANI 170
+L A F +D+ + PL +A++ LEE+ FE N
Sbjct: 873 NLDKALDFFYDLVSSDFRPTPRTYG----PLIDGLAKVGRLEEAMRLFEEMSDYGCKPNC 928
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
+ +I+GYGK + A M G D + T++V AG + A F E
Sbjct: 929 AIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNE 988
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
+K G D +Y ++ ++ ++ L EM + + Y +L+ + G
Sbjct: 989 LKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGM 1048
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
E A+R++E +Q AG+ PD LI Y ++ + AYT ++NM G P+
Sbjct: 1049 VEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPN 1102
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 88/180 (48%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M+ G++ D VT T++V + KA + A TF+ ++ G + +Y +++ +RAG
Sbjct: 358 MEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGR 417
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
++ LL M++ V + Y + + +G + A FE ++ GI P+ C
Sbjct: 418 IEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNA 477
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+ + G+ ++A T F +R+ GL P +++ K Q++ A+ L ++ R+G
Sbjct: 478 SLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNG 537
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 90/205 (43%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D +T +++ +K+ NL A + F ++ R+YG ++ + G L+ L
Sbjct: 857 DAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLF 916
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
EM ++ L+ GY G++E A ++F+ + GI PD + +L++ +A
Sbjct: 917 EEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLA 976
Query: 324 GQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEAS 383
G+ +A F ++ GL+P I++ K ++ AL ++ G +
Sbjct: 977 GRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTY 1036
Query: 384 CTLAAWFKRLGVVEEVEHVLREYGL 408
+L G+VE+ + + E L
Sbjct: 1037 NSLMLNLGLAGMVEQAKRMYEELQL 1061
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 100/243 (41%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+E ++ YT +I Q++NA+ + MK G DQV ++ ++ G+L
Sbjct: 290 DEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLD 349
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
+E + +++ G D ++ +V +A D M Q + Y L+
Sbjct: 350 TFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLI 409
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G G E A ++ + ++ G+ P A I+ + +G++ KA F+ M+ G+
Sbjct: 410 CGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIV 469
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ L + + +L A L +G + + ++G V+E ++
Sbjct: 470 PNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNL 529
Query: 403 LRE 405
L E
Sbjct: 530 LSE 532
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 98/234 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ E + +++ Y+ ++ GKK + L M+ G + T T+ + + +AG
Sbjct: 218 MVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGK 277
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A E F + G D +Y ++ A AG L+ + L +M A +Y
Sbjct: 278 IDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYIT 337
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL ++ G+ + + + ++ G PD +L++ A +A+ F MRK G
Sbjct: 338 LLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQG 397
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
+ P+ ++ + ++ AL+ L +E G T +F + G
Sbjct: 398 ILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSG 451
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 85/200 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I G + +I++A L M+ G T + + K+G A ETF
Sbjct: 401 NLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETF 460
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++K G + + + + + G L + + + + S Y +++ YS
Sbjct: 461 EKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKV 520
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A + + G PD + LI++ AG+ +A+ F M+ L P+
Sbjct: 521 GQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTY 580
Query: 349 ALILSACEKENQLNRALEFL 368
+LS KE ++ +A+E
Sbjct: 581 NTLLSGLGKEGRVQKAIELF 600
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 87/222 (39%), Gaps = 1/222 (0%)
Query: 185 QIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYG 244
+++ A+ ++ G D VT +M+ YSK G + A E+ G D
Sbjct: 487 RLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVN 546
Query: 245 SMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFA 304
S++ + +AG +D + M ++ Y LL G G + A +FE++
Sbjct: 547 SLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXK 606
Query: 305 GITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
+P+ L++ + + + A F M +P ++ KEN++N A
Sbjct: 607 KCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHA 666
Query: 365 LEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREY 406
F L++ CTL + G + + + R++
Sbjct: 667 FWFFHQLKK-SMHPDHVTICTLLPGLVKCGQIGDAISIARDF 707
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 85/209 (40%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y I + ++ L M++ GF+ + + ++ + ++G A E +
Sbjct: 156 DLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVY 215
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ G ++Y ++++A + + VLL+EM+ + + +R
Sbjct: 216 RRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRA 275
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A +F + G PD +LI+A AGQ + A F M+ G +P
Sbjct: 276 GKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIY 335
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFM 377
+L L+ EF +E DG+M
Sbjct: 336 ITLLDKFNDFGDLDTFKEFWSQMEADGYM 364
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/176 (19%), Positives = 70/176 (39%)
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
G L+ +++ G L+ SY ++ +++G + R M ++ + + Y
Sbjct: 171 GGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTY 230
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
AL+ +SE + + ++ G+ P+ + I AG+ +AY F+ M
Sbjct: 231 SALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDD 290
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
G P +++ A QL A E + ++ +G + TL F G
Sbjct: 291 EGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFG 346
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
+E A +F+ ++ G PDA +L+ + +G+ + + ++ M +P +
Sbjct: 804 TEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNI 863
Query: 351 ILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE---YG 407
++S+ K N L++AL+F DL F L ++G +EE + E YG
Sbjct: 864 VISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYG 923
Query: 408 LR 409
+
Sbjct: 924 CK 925
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 62/320 (19%), Positives = 117/320 (36%), Gaps = 12/320 (3%)
Query: 91 AISQFPRKM--TKRCKAFVKQIICVSPETGNLSDLLAAWVRFMKPR--RAD---WLAVLK 143
+IS+FP + T+ C F+ + + V + ++ AA FM+ + R D +L + K
Sbjct: 111 SISEFPTVLHTTETCN-FMLEFLRVHDKVEDM----AAVFEFMQKKIIRRDLDTYLTIFK 165
Query: 144 QLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFIC 203
L + + + + F N Y +IH + A M G
Sbjct: 166 ALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKP 225
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
T + ++V K + +M +E++ LG + ++ + RAG +D +
Sbjct: 226 SLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIF 285
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
R MD + Y L+ G E A+ +F ++ G PD + L++ +
Sbjct: 286 RRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDF 345
Query: 324 GQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEAS 383
G + M G P +++ K + A + + G +
Sbjct: 346 GDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTY 405
Query: 384 CTLAAWFKRLGVVEEVEHVL 403
TL R G +E+ +L
Sbjct: 406 NTLICGLLRAGRIEDALKLL 425
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 84/185 (45%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
LL + ++ Y +I G +K + A M R + VT ++++ + + G
Sbjct: 427 TLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKG 486
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A +E+ G + +Y S++ Y R+G + +G+ L++M + +
Sbjct: 487 QVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFN 546
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ GY N GA VF ++ + PDA ++IN + G ++A F+ M +
Sbjct: 547 TLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGAS 606
Query: 340 GLEPS 344
G+EP
Sbjct: 607 GIEPD 611
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 85/174 (48%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I + +K Q++ A L M +G + + +T ++ Y ++GN+K ++ +++
Sbjct: 475 YSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMM 534
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
D ++ +++ Y++ + + M+ + V + Y ++ G+S GN E
Sbjct: 535 QDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNME 594
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
A RVF+ + +GI PD LIN + AG S++A+ M G P DK
Sbjct: 595 EAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPDDK 648
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 104/243 (42%), Gaps = 8/243 (3%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y +++G K+ ++ +AE L MK RG D T T ++ Y + GN + A + F
Sbjct: 366 DVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLF 425
Query: 229 EEIKLLGEPL--DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
+ LL + L D +Y S++ R G L + L +M A+E++ Y L+ +
Sbjct: 426 D--TLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHC 483
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G E A + + G P+ +I Y +G +K Q M + + P
Sbjct: 484 EKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLI 543
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGFMVGKEASC--TLAAWFKRLGVVEEVEHVLR 404
++ KE ++ A +E++ MV +A + F G +EE V +
Sbjct: 544 TFNTLIHGYIKEENMHGAFNVFNIMEKE--MVQPDAVTYNMIINGFSEQGNMEEAGRVFK 601
Query: 405 EYG 407
+ G
Sbjct: 602 KMG 604
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 86/205 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L E N ++H Y K ++ A+ + M++R D VT V++ +AG+
Sbjct: 148 VLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGD 207
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + + G ++ S++ + D+ + + R MD V +
Sbjct: 208 VDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNI 267
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G+ G E A + ++ +Q G+TPD + LI + G+ A + M+ G
Sbjct: 268 LIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLG 327
Query: 341 LEPSDKCVALILSACEKENQLNRAL 365
L P +++ + ++ AL
Sbjct: 328 LVPDGVIYTMVIGGFCRAGSMSEAL 352
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 131/314 (41%), Gaps = 43/314 (13%)
Query: 131 MKPRRADWLAVLKQLKLMEHPLYLQVAEL--ALLEESFEANIRDYTKIIHGYGKKMQIQN 188
+KP + +VLK L +H + + E+ A+ + S ++R + +I G+ + +++
Sbjct: 223 LKPGIVTFNSVLK--GLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEE 280
Query: 189 AENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVM 248
A M++RG D V+ + ++ ++S G + A E+K LG D Y ++
Sbjct: 281 AMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIG 340
Query: 249 AYVRAG------------------------------------MLDRGEVLLREMDAQEVY 272
+ RAG +LD E LL EM + V
Sbjct: 341 GFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLD-AEELLNEMKERGVT 399
Query: 273 VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTA 332
+ L+ GY +GN E A ++F+ + + PD LI+ G KA
Sbjct: 400 PDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANEL 459
Query: 333 FQNMRKAGLEPSDKCVALIL-SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFK 391
+ +M + P+ ++++ S CEK Q+ A FL ++ G + ++ +
Sbjct: 460 WDDMHAREIFPNHVTYSILIDSHCEK-GQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYC 518
Query: 392 RLGVVEEVEHVLRE 405
R G V++ + L++
Sbjct: 519 RSGNVKKGQQFLQK 532
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 87/199 (43%)
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
TL +MV Y K+ A+ E++ D ++ ++ A RAG +D L+ M
Sbjct: 159 TLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSM 218
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
+ + G + ++L+G + + A+ VF A+ + PD R +LI + G+
Sbjct: 219 ANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEV 278
Query: 327 QKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
++A ++ M++ G+ P + ++ +++ A +L +++ G + +
Sbjct: 279 EEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMV 338
Query: 387 AAWFKRLGVVEEVEHVLRE 405
F R G + E V E
Sbjct: 339 IGGFCRAGSMSEALRVRDE 357
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/211 (19%), Positives = 86/211 (40%), Gaps = 4/211 (1%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
++ + + I + ++ G K + A+ AM + D + +++ + + G
Sbjct: 217 SMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVG 276
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A + ++E++ G D S+ ++ + G +D LREM + +Y
Sbjct: 277 EVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYT 336
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
++ G+ G+ A RV + + G PD L+N + A M++
Sbjct: 337 MVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKER 396
Query: 340 GLEPSDKC--VALILSACEKENQLNRALEFL 368
G+ P D C LI C ++ +AL+
Sbjct: 397 GVTP-DLCTFTTLIHGYC-RDGNFEKALQLF 425
>gi|255660898|gb|ACU25618.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 484
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 113/243 (46%), Gaps = 6/243 (2%)
Query: 141 VLKQLKLMEHPL-YLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR 199
VL K EH L + + E + L FE N + KII G+ ++ +A LL M ++
Sbjct: 18 VLHSSKTSEHALQFFRWVERSNL---FEHNRETHLKIIEILGRASKLNHARCILLDMPKK 74
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G D+ +M+ Y K G ++ + + F++++ LG +SY ++ +R G
Sbjct: 75 GLEWDEDMWVMMIDSYGKZGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMA 134
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+ +M ++ + + ++ G+ ++G E A R FE ++ I+PD +IN
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMING 194
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
Y + ++A F M+ +EP+ ++ +Q++ AL + +++ GF +
Sbjct: 195 YYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK--GFGIK 252
Query: 380 KEA 382
A
Sbjct: 253 PNA 255
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 8/202 (3%)
Query: 163 EESFEANIRDYT---KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
E E I+ Y K+I G+ M + N +L+ G + T VM+ + +G
Sbjct: 108 ELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLS---EGIEPTRHTFNVMIWGFFLSG 164
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A FE++K D +Y +M+ Y R ++ E EM + + Y
Sbjct: 165 KVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYT 224
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L++GY + A R+ E ++ GI P+A + L+ A + +A + M
Sbjct: 225 TLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDK 284
Query: 340 GLEPSDKCV--ALILSACEKEN 359
L P+D + LI S C+ N
Sbjct: 285 YLAPTDNSIFMRLISSHCKSGN 306
>gi|298204410|emb|CBI16890.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 3/210 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
NI + +IH K ++ AE L M+ R D T ++ +Y K G A
Sbjct: 221 NIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQ 280
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVL-LRE-MDAQEVYVGSEVYKALLRGYS 286
+ ++ G D +Y S++ + R + D E L LRE M+ + ++ G Y ++LR
Sbjct: 281 DRMERGGVSPDIVTYNSLIYGFCRE-VNDLEEALRLREVMEVEGLHPGVVTYNSILRKLC 339
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G + A R+ + + PD C LINAY G A + M +AGL+P
Sbjct: 340 EEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQF 399
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGF 376
++ K ++++ A EFL ++ GF
Sbjct: 400 TFKALIHGFCKLHEVDSAKEFLFEMLDAGF 429
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 50/99 (50%)
Query: 274 GSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAF 333
S++ L+ Y+ + ++ A +VFE ++ G P C +L+N+ A + + +
Sbjct: 151 NSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVY 210
Query: 334 QNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLE 372
+ M + G+ P+ +++ AC K + +A + L ++E
Sbjct: 211 KKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEME 249
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 6/166 (3%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
+I+ Y K + +A M G DQ T ++ + K + A+E E+ G
Sbjct: 369 LINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAG 428
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLR---EMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+Y +V +Y D E ++R E+ + ++V VY+AL+R E
Sbjct: 429 FSPSYSTYSWLVDSYYDQ---DNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIE 485
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
A+R+F +Q G+ D+ + L AY AG++ A M K
Sbjct: 486 SAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDK 531
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 88/222 (39%), Gaps = 18/222 (8%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFI-----------------CDQVTLTVMVVMYSKA 218
+IH K Q + A+N L + R ++ + L+ +V+ Y+ +
Sbjct: 106 MIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAVVRIHDDPDSNSQILSWLVIFYANS 165
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
+ A + FE +++ G + ++ + +A + + + ++M V ++
Sbjct: 166 RMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIF 225
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
L+ +G+ E A+++ ++ I PD LI+ Y G +A M +
Sbjct: 226 NVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMER 285
Query: 339 AGLEPSDKCV-ALILSACEKENQLNRALEFLIDLERDGFMVG 379
G+ P +LI C + N L AL +E +G G
Sbjct: 286 GGVSPDIVTYNSLIYGFCREVNDLEEALRLREVMEVEGLHPG 327
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/178 (19%), Positives = 78/178 (43%), Gaps = 1/178 (0%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
++N + + ++ Y Q+A M+ GF TV++ +KA M +
Sbjct: 149 DSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWK 208
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
++++ +G + + ++ A ++G +++ E LL EM+++ ++ Y L+ Y
Sbjct: 209 VYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYC 268
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAY-QMAGQSQKAYTAFQNMRKAGLEP 343
G A + + ++ G++PD LI + + ++A + M GL P
Sbjct: 269 KKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREVNDLEEALRLREVMEVEGLHP 326
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 27/133 (20%), Positives = 55/133 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L+ F + Y+ ++ Y + + + R+G D ++ K
Sbjct: 424 MLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDK 483
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ AE F ++ G D Y S+ AY +AG +L EMD + + + ++Y+
Sbjct: 484 IESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRC 543
Query: 281 LLRGYSMNGNSEG 293
Y+ +G+ G
Sbjct: 544 FSASYAGDGSILG 556
>gi|334182978|ref|NP_001185123.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|332193283|gb|AEE31404.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 811
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 103/240 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ + +I+G+ K+ ++ A + M++RG D + + ++ Y KAG L M + F
Sbjct: 285 NVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLF 344
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ G LD + S + YV++G L V+ + M Q + Y L++G +
Sbjct: 345 SQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQD 404
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G A ++ I G+ P + LI+ + G + + +++M K G P
Sbjct: 405 GRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIY 464
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGL 408
+++ K+ + A+ F + + + +L + RL +E V R G+
Sbjct: 465 GVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGI 524
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 82/185 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L+E E +I Y +I GY ++ AE +K F + VTLT+++ + K +
Sbjct: 598 LIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNND 657
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A F + G + +YG ++ + ++ ++ L EM + + Y
Sbjct: 658 MDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSI 717
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G G + A +F A + PD A+LI Y G+ +A +++M + G
Sbjct: 718 IIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNG 777
Query: 341 LEPSD 345
++P D
Sbjct: 778 VKPDD 782
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 84/184 (45%), Gaps = 1/184 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E F I K++ G QI+ A L + G + VT ++ + K G
Sbjct: 243 VMERGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGE 301
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + F+ ++ G D +Y +++ Y +AGML G L + + V + V+ +
Sbjct: 302 MDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSS 361
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+ Y +G+ A V++ + GI+P+ +LI G+ +A+ + + K G
Sbjct: 362 TIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRG 421
Query: 341 LEPS 344
+EPS
Sbjct: 422 MEPS 425
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 74/167 (44%), Gaps = 8/167 (4%)
Query: 152 LYLQVAELA--------LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFIC 203
+Y++ +LA +L + N+ YT +I G + +I A + +RG
Sbjct: 365 VYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEP 424
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
VT + ++ + K GNL+ +E++ +G P D YG +V + G++
Sbjct: 425 SIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFS 484
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDA 310
+M Q + + V+ +L+ G+ + A +VF + GI PD
Sbjct: 485 VKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDV 531
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 72/170 (42%), Gaps = 2/170 (1%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE-IKLLGEPLDKRSYGSMVMAYVRAG 254
M+R D V++ + K ++ A + F I+ EP D +Y +M+ Y
Sbjct: 563 MQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEP-DIVTYNTMICGYCSLR 621
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
LD E + + + L+ N + +GA R+F + G P+A
Sbjct: 622 RLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYG 681
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
L++ + + + ++ F+ M++ G+ PS ++I+ K +++ A
Sbjct: 682 CLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEA 731
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 106/257 (41%), Gaps = 18/257 (7%)
Query: 131 MKPRRADWLAVLKQ-------LKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKK 183
+KP A + V++ K M+ + LQ+ +L + A+I +IH K
Sbjct: 527 IKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDL-MQRNKISADIAVCNVVIHLLFKC 585
Query: 184 MQIQNAE---NTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDK 240
+I++A N L+ K D VT M+ Y L AE FE +K+ P
Sbjct: 586 HRIEDASKFFNNLIEGKMEP---DIVTYNTMICGYCSLRRLDEAERIFELLKV--TPFGP 640
Query: 241 RSYGSMVMAYV--RAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
+ ++ +V + +D + M + + Y L+ +S + + EG+ ++F
Sbjct: 641 NTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLF 700
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
E +Q GI+P +++I+ G+ +A F A L P A+++ K
Sbjct: 701 EEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKV 760
Query: 359 NQLNRALEFLIDLERDG 375
+L A + R+G
Sbjct: 761 GRLVEAALLYEHMLRNG 777
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 99/208 (47%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I +T +I GY ++ + + +RG + + VT +++V + ++G +K+AEE F
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+ G D +YG ++ G L++ + ++ ++ +G +Y ++ G
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G E A +F ++ G+ P+ ++I+ G +A + M + G P+D
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 546
Query: 349 ALILSACEKENQLNRALEFLIDLERDGF 376
++ A ++ L + + + +++ GF
Sbjct: 547 NTLIRAHLRDGDLTASAKLIEEMKSCGF 574
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 91/215 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ NI Y ++ GY + ++ A N L M R D VT T ++ Y
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 383
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ + F I G + +Y +V + ++G + E L +EM + V Y
Sbjct: 384 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 443
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL G NG E A +FE +Q + + M +I G+ + A+ F ++ G
Sbjct: 444 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKG 503
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
++P+ +++S K+ L+ A L +E DG
Sbjct: 504 VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 538
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 107/246 (43%), Gaps = 4/246 (1%)
Query: 157 AELALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMV 212
A ++L +E ++++ Y ++ G K + + L M R + + +T V++
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
Query: 213 VMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY 272
++ K G L+ A E ++E+ G + +Y +++ Y L +L M +
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365
Query: 273 VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTA 332
+ +L++GY M + +VF I G+ +A ++L+ + +G+ + A
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425
Query: 333 FQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKR 392
FQ M G+ P ++L +L +ALE DL++ +G T+ +
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 485
Query: 393 LGVVEE 398
G VE+
Sbjct: 486 GGKVED 491
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/245 (17%), Positives = 102/245 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E + ++ Y I++G + A + L M+ R D T + ++ + G
Sbjct: 184 MVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGC 243
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A F+E++ G +Y S+V +AG + G +LL++M ++E+ +
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL + G + A +++ + GI+P+ L++ Y M + +A M +
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
P ++ +++ ++ ++ + G + L F + G ++ E
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423
Query: 401 HVLRE 405
+ +E
Sbjct: 424 ELFQE 428
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/179 (18%), Positives = 78/179 (43%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
+E + + +I+G + ++ A + M G D VT +V ++G+ +A
Sbjct: 154 YEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAF 213
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+ +++ D +Y +++ + R G +D L +EM+ + + Y +L+RG
Sbjct: 214 DMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL 273
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
G + + + I P+ +L++ + G+ Q+A ++ M G+ P+
Sbjct: 274 CKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332
Score = 41.2 bits (95), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 38/198 (19%), Positives = 79/198 (39%), Gaps = 36/198 (18%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM---------------- 211
AN Y+ ++ G+ + +I+ AE M G + D +T ++
Sbjct: 401 ANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEI 460
Query: 212 ------------VVMYS-------KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVR 252
+VMY+ K G ++ A F + G + +Y M+ +
Sbjct: 461 FEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCK 520
Query: 253 AGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARM 312
G L +LLR+M+ Y L+R + +G+ + ++ E ++ G + DA
Sbjct: 521 KGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASS 580
Query: 313 CALLINAYQMAGQSQKAY 330
++I+ ++G+ K++
Sbjct: 581 IKMVIDML-LSGELDKSF 597
>gi|147812173|emb|CAN61517.1| hypothetical protein VITISV_033966 [Vitis vinifera]
Length = 635
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/290 (20%), Positives = 120/290 (41%), Gaps = 5/290 (1%)
Query: 92 ISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRF----MKPRRADWLAVLKQLKL 147
ISQ + F +I E+GN+ + + + + KP + + ++K +
Sbjct: 130 ISQVEENGMEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGI 189
Query: 148 MEHPLYLQ-VAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQV 206
P Q + ZL +E+ N+R Y ++ + K I A N + M G D V
Sbjct: 190 AGEPEESQKLLZLMSQDENVRPNLRTYNVLVRAWCNKXNIMKAWNVVYKMVASGLQPDAV 249
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
T + Y++ G AE E++ ++R+ ++ Y + G + + M
Sbjct: 250 TYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRM 309
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
+ V+ +L++G+ + +G V ++ G+ PD + ++NA+ AG
Sbjct: 310 KDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFM 369
Query: 327 QKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
K F +M KA ++P +++ + + +A E L + + GF
Sbjct: 370 DKCREIFDDMVKARIQPDAHVYSILAKGYVRAGEPEKAEEILNAMIKSGF 419
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 108/253 (42%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
L + + + N R II GY K+ +I+ A + MK G + V ++ + A
Sbjct: 272 LEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDA 331
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
+ E ++ G D ++ +++ A+ AG +D+ + +M + + VY
Sbjct: 332 VDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVY 391
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
L +GY G E A+ + A+ +G P+ M +IN + AG+ + A F+ M +
Sbjct: 392 SILAKGYVRAGEPEKAEEILNAMIKSGFHPNVVMFTTIINGWCSAGRMEYAIKIFEKMCE 451
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
G+ P+ K ++ + Q ++ E L +E K +A ++ G+ +E
Sbjct: 452 CGIAPNLKTFETLIWGYGEARQPWKSEEVLQIMEEFNVQPEKTTLLLVAEAWRATGLKKE 511
Query: 399 VEHVLREYGLRET 411
+L ET
Sbjct: 512 ANRILSAVKNEET 524
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 76/172 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y I Y + + AE +L M+ ++ T +++ Y K G +K A + +K
Sbjct: 251 YNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMK 310
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
LG + + S++ ++ A D +L M+ V + ++ +S G +
Sbjct: 311 DLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMD 370
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
+ +F+ + A I PDA + ++L Y AG+ +KA M K+G P+
Sbjct: 371 KCREIFDDMVKARIQPDAHVYSILAKGYVRAGEPEKAEEILNAMIKSGFHPN 422
>gi|410110123|gb|AFV61141.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
macrophylla]
Length = 381
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 100/212 (47%), Gaps = 4/212 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y +I YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 173 KNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDR 232
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ + +M++AY RAG++ + LL E+ + + + +L
Sbjct: 233 AAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDTAIHILA 291
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + F MR G P
Sbjct: 292 G---AGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKXKKYSNVVEVFNKMRGLGYFP 348
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDG 375
+A +L+A K + ++A + ++++ G
Sbjct: 349 DSDVIAXVLNAYGKLQEFDKANDVYMEMQEVG 380
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 102/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + MK G + + + + ++ MY + A
Sbjct: 35 FTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEAL 94
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 95 SVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 154
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + +I Y + +KA Q M+ G+E
Sbjct: 155 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIE 211
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 212 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRL 271
Query: 403 LRE 405
L E
Sbjct: 272 LHE 274
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 102/237 (43%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 73 NTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 132
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 133 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKT 192
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G+E
Sbjct: 193 LEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILF 252
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE +V R+
Sbjct: 253 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGA----GRIEEATYVFRQ 305
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 60/141 (42%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D V + ++ + K + A F +K G D +Y +M+ + +A + L+
Sbjct: 3 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 62
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
EM V + Y LL Y N A VF ++ D C ++I+ Y
Sbjct: 63 SEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 122
Query: 324 GQSQKAYTAFQNMRKAGLEPS 344
G +++A F MRK G+EP+
Sbjct: 123 GMAKEADKLFWGMRKMGIEPN 143
>gi|218193953|gb|EEC76380.1| hypothetical protein OsI_13992 [Oryza sativa Indica Group]
Length = 822
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 105/223 (47%), Gaps = 13/223 (5%)
Query: 152 LYLQVAELA--LLEESFEANIRDYTKIIHG--YGKKMQIQNAENTLLAMKRRGF---ICD 204
+Y V LA ++EE + T+I+ Y + +++ A +++ RRGF + D
Sbjct: 91 MYSDVLALAVTMVEEGVLPDRFLITRILQACAYAEDLELGRALHSMAI--RRGFMGRVKD 148
Query: 205 QVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLR 264
++VMY+K G+L A + F+++ D ++ SM+ Y R+ + LL
Sbjct: 149 VPVGNSVLVMYAKCGDLGWARKVFDKMVCR----DLGTWNSMIFGYCRSAEWEEARHLLD 204
Query: 265 EMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAG 324
M + G + L+ Y+ G+ + A + ++ +G+ PD L++ +
Sbjct: 205 SMRQEGTQPGVVTWNTLISSYARFGDLDVAMELLGQMEESGVAPDVVTWTSLVSGFVHMD 264
Query: 325 QSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
+S +A F MR AG+EP+ +A +SAC LN+A E
Sbjct: 265 RSDEALRCFIRMRLAGVEPNGMSIACAISACASLKLLNQAKEL 307
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 60/138 (43%), Gaps = 4/138 (2%)
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G + + ++ +V MY+K G + A F I D S+ SM+ Y +AG +
Sbjct: 315 GSVNNVLSGNSLVDMYAKCGEIVAAWRIFSGIP----DKDIFSWNSMISGYAQAGYCGKA 370
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
L +M+ V + ++ GY NG+ E A +F+ ++ G+ D +LI
Sbjct: 371 YELFCKMENYGVRRNVITWNTMISGYIRNGDDERAFELFQMMESHGVKRDTATWNILIAG 430
Query: 320 YQMAGQSQKAYTAFQNMR 337
G +A F+ M+
Sbjct: 431 SVHNGYYDRAIRIFRQMQ 448
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 49/250 (19%), Positives = 95/250 (38%), Gaps = 6/250 (2%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
+ +I + +I GY + A M+ G + +T M+ Y + G+ + A E
Sbjct: 348 DKDIFSWNSMISGYAQAGYCGKAYELFCKMENYGVRRNVITWNTMISGYIRNGDDERAFE 407
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
F+ ++ G D ++ ++ V G DR + R+M A +++ ++
Sbjct: 408 LFQMMESHGVKRDTATWNILIAGSVHNGYYDRAIRIFRQMQALLRRPDYITILSIIPAFT 467
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
S + + I + D ++ LINAY +G A F +M + S
Sbjct: 468 NLVASWKVREIHACIFHHNLELDGKIANALINAYSKSGNLASACAVF-DMHSSRNIISWN 526
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREY 406
C+ L A N AL+ ++++G + T+ + G V E +
Sbjct: 527 CIIL---AHVLHGSPNEALDLFCQMKQEGVVPDHTTLVTVIKAYGLTGKVSEGSQTF--F 581
Query: 407 GLRETYSKIP 416
+ Y+ P
Sbjct: 582 NMANDYNITP 591
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 58/134 (43%), Gaps = 5/134 (3%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D ++ YSK+GNL A F+ + + S+ +++A+V G + L
Sbjct: 490 DGKIANALINAYSKSGNLASACAVFD----MHSSRNIISWNCIILAHVLHGSPNEALDLF 545
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGN-SEGAQRVFEAIQFAGITPDARMCALLINAYQM 322
+M + V +++ Y + G SEG+Q F ITP+ A +++
Sbjct: 546 CQMKQEGVVPDHTTLVTVIKAYGLTGKVSEGSQTFFNMANDYNITPELDHYAAMVDLLGR 605
Query: 323 AGQSQKAYTAFQNM 336
+G+ ++AY M
Sbjct: 606 SGRLKEAYELIDEM 619
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 107/247 (43%), Gaps = 11/247 (4%)
Query: 155 QVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
Q+ E + + F ++ Y +I G+ K +++ M +RG + + VT +++
Sbjct: 382 QMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 440
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
+AG+ MA+E F+E+ G P + +Y +++ + G L++ V+ + ++
Sbjct: 441 LFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 500
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
Y ++ G G E +F + G+ PD +I+ + G ++A F+
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFK 560
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
M++ G P+ C ++ A ++ D E ++ + SC A +G
Sbjct: 561 EMKEDGTLPNSGCYNTLIRARLRDG----------DREASAELIKEMRSCGFAGDASTIG 610
Query: 395 VVEEVEH 401
+V + H
Sbjct: 611 LVTNMLH 617
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 85/210 (40%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
E + Y II G K + +A N M+ +G + VT + ++ G A
Sbjct: 252 LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS 311
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
++ D ++ +++ A+V+ G L E L EM + + Y +L+ G+
Sbjct: 312 RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 371
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
M+ + A+++FE + PD LI + + ++ F+ M + GL +
Sbjct: 372 CMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 431
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDG 375
+++ + + A E ++ DG
Sbjct: 432 VTYNILIQGLFQAGDCDMAQEIFKEMVSDG 461
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/180 (16%), Positives = 69/180 (38%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M+ G + T ++++ + + L +A ++ LG + + S++ Y +
Sbjct: 107 MQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKR 166
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
+ L+ +M + + L+ G ++ + A + + + G PD +
Sbjct: 167 ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGV 226
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
++N G + A+ M + LEP I+ K ++ AL ++E G
Sbjct: 227 VVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG 286
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 101/211 (47%), Gaps = 5/211 (2%)
Query: 148 MEHPLYLQVAELALLEE-SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQV 206
M+ L LQ A++E+ A++ Y + +G K + A+ L +M +G + V
Sbjct: 408 MDEALRLQ----AIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVV 463
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
T T+ + +Y K GNL AE F +++ GE + +Y +++ AY + + + + EM
Sbjct: 464 TFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEM 523
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
+ + Y +L+ G + G + A ++F ++ GIT + +I+ G++
Sbjct: 524 INKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRA 583
Query: 327 QKAYTAFQNMRKAGLEPSDKCVALILSACEK 357
+A+ + M K GL P D+ ++ + K
Sbjct: 584 DEAFKLYDEMMKIGLIPDDRVFTSLVGSFHK 614
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 109/263 (41%), Gaps = 18/263 (6%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRD 172
V P + LL A+V R D V + LKLME +E ++
Sbjct: 248 VKPNVFTYNTLLNAYVG-----RKDRKGVDEILKLME-------------KEQVVFSVAT 289
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I Y I+ AE M+ + D + M+ + GN+K A F+E+
Sbjct: 290 YSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMS 349
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ +YG+++ +AG ++ E+LL EM ++ V + ++ + GY G +
Sbjct: 350 QRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMD 409
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A R+ ++ GI D +L N + +A +M + G++P+ + +
Sbjct: 410 EALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFI 469
Query: 353 SACEKENQLNRALEFLIDLERDG 375
KE L A D+E+ G
Sbjct: 470 EIYCKEGNLAEAERLFRDMEKKG 492
>gi|357503117|ref|XP_003621847.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496862|gb|AES78065.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 457
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 98/235 (41%), Gaps = 1/235 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I Y +I GY + + I A N L MK G D V+ + + L+ + + F
Sbjct: 41 DIITYNTLIDGYCRFVGIDAAYNILNRMKEAGINPDVVSYNSLSSGAVRKCLLQKSLDLF 100
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM-DAQEVYVGSEVYKALLRGYSM 287
+E+ G D SY ++ Y R G + + R++ + E+Y Y ++ G
Sbjct: 101 DEMLQSGIRPDVWSYNILMHCYFRLGKPEEANGVFRDIFERGEIYPSMASYNVMINGLCK 160
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
NG A +F ++ G P+ +IN A + A G EP+
Sbjct: 161 NGYVNNALMLFRNLRRRGFVPEVLTYNAMINGLCKARRLADARRVLNEFCDFGFEPNAIT 220
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
++ C + +L + LE L ++ R GF A CT+ A + G +EE + +
Sbjct: 221 YTTVMKCCFRCGRLEQGLEILSEMRRKGFTFDGFAYCTVVAALVKTGRIEEADEI 275
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 100/238 (42%), Gaps = 4/238 (1%)
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA 224
FE N YT ++ + +++ L M+R+GF D +V K G ++ A
Sbjct: 213 GFEPNAITYTTVMKCCFRCGRLEQGLEILSEMRRKGFTFDGFAYCTVVAALVKTGRIEEA 272
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
+E E++ G D SY +M+ + R G D L+ E++ Q + + ++ G
Sbjct: 273 DEIAEKMMSNGLVPDLASYNTMINLFCRQGRFDEALRLVDEIEKQGMKCDQYTHTIIIHG 332
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
+GN EGA++ + + G + +++ AG KA F +M ++ S
Sbjct: 333 LCKDGNFEGAEKHLDYMNTLGFGFNLVAFNSILDCLGKAGDIDKAVKVFDSME---VKDS 389
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
+L+ + C + + A + L+ DGF + + + G+V E V
Sbjct: 390 FTYTSLLHNLC-RAKKFRIASKLLVASIEDGFQILRATQRAVIDGLTTSGLVYEARKV 446
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 96/241 (39%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+G K + NA ++RRGF+ + +T M+ KA L A E
Sbjct: 151 YNVMINGLCKNGYVNNALMLFRNLRRRGFVPEVLTYNAMINGLCKARRLADARRVLNEFC 210
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +Y +++ R G L++G +L EM + Y ++ G E
Sbjct: 211 DFGFEPNAITYTTVMKCCFRCGRLEQGLEILSEMRRKGFTFDGFAYCTVVAALVKTGRIE 270
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + E + G+ PD +IN + G+ +A + K G++ +I+
Sbjct: 271 EADEIAEKMMSNGLVPDLASYNTMINLFCRQGRFDEALRLVDEIEKQGMKCDQYTHTIII 330
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRETY 412
K+ A + L + GF A ++ + G +++ V +++++
Sbjct: 331 HGLCKDGNFEGAEKHLDYMNTLGFGFNLVAFNSILDCLGKAGDIDKAVKVFDSMEVKDSF 390
Query: 413 S 413
+
Sbjct: 391 T 391
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/129 (19%), Positives = 64/129 (49%), Gaps = 1/129 (0%)
Query: 155 QVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
++AE ++ ++ Y +I+ + ++ + A + ++++G CDQ T T+++
Sbjct: 274 EIAE-KMMSNGLVPDLASYNTMINLFCRQGRFDEALRLVDEIEKQGMKCDQYTHTIIIHG 332
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
K GN + AE+ + + LG + ++ S++ +AG +D+ + M+ ++ +
Sbjct: 333 LCKDGNFEGAEKHLDYMNTLGFGFNLVAFNSILDCLGKAGDIDKAVKVFDSMEVKDSFTY 392
Query: 275 SEVYKALLR 283
+ + L R
Sbjct: 393 TSLLHNLCR 401
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 106/247 (42%), Gaps = 11/247 (4%)
Query: 155 QVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
Q+ E + + F ++ Y +I G+ K +++ M +RG + + VT +++
Sbjct: 996 QMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 1054
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
+AG+ MA+E F+E+ G P + +Y +++ + G L++ V+ + ++
Sbjct: 1055 LFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 1114
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
Y ++ G G E +F + G+ PD +I+ + G ++A F+
Sbjct: 1115 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFK 1174
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
M++ G P+ C N L RA D E ++ + SC A +G
Sbjct: 1175 EMKEDGTLPNSGCY----------NTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG 1224
Query: 395 VVEEVEH 401
+V + H
Sbjct: 1225 LVTNMLH 1231
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 83/178 (46%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
A++ Y +I+G+ K ++++ M +RG + + VT ++ + +AG++ A+E
Sbjct: 431 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 490
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
F ++ G D +Y ++ G L++ V+ +M +E+ + Y ++RG
Sbjct: 491 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 550
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
G E A +F ++ G+ PD +++ G + + M++ GL +D
Sbjct: 551 TGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKND 608
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 102/240 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++++ N+ Y+ ++ + K ++ A+ M R D VT + ++
Sbjct: 354 MIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDR 413
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + F+ + G D SY +++ + +A ++ G L REM + + + Y
Sbjct: 414 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 473
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L++G+ G+ + AQ F + F GI+PD +L+ G+ +KA F++M+K
Sbjct: 474 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 533
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
++ ++ K ++ A L G T+ + G++ EVE
Sbjct: 534 MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE 593
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 117/275 (42%), Gaps = 21/275 (7%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRD 172
++P S LL A+V+ K VL+ +L E ++ S + +I
Sbjct: 359 ITPNVITYSALLDAFVKNGK--------VLEAKELFEE----------MVRMSIDPDIVT 400
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I+G +I A M +G + D V+ ++ + KA ++ + F E+
Sbjct: 401 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 460
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +Y +++ + +AG +D+ + +MD + Y LL G NG E
Sbjct: 461 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELE 520
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +FE +Q + D +I G+ ++A++ F ++ GL+P ++
Sbjct: 521 KALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 580
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLA 387
S + L+ ++++G M + CTL+
Sbjct: 581 SGLCTKGLLHEVEALYTKMKQEGLM---KNDCTLS 612
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 85/210 (40%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
E + Y II G K + +A N M+ +G + VT + ++ G A
Sbjct: 866 LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS 925
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
++ D ++ +++ A+V+ G L E L EM + + Y +L+ G+
Sbjct: 926 RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 985
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
M+ + A+++FE + PD LI + + ++ F+ M + GL +
Sbjct: 986 CMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 1045
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDG 375
+++ + + A E ++ DG
Sbjct: 1046 VTYNILIQGLFQAGDCDMAQEIFKEMVSDG 1075
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/245 (18%), Positives = 100/245 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L+ +E + +++G+ ++ ++ +A + + M G+ D V ++ K
Sbjct: 249 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKR 308
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + F+EI+ G + +Y ++V + LL +M +++ Y A
Sbjct: 309 VNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSA 368
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL + NG A+ +FE + I PD + LIN + + +A F M G
Sbjct: 369 LLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG 428
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+++ K ++ ++ ++ + G + TL F + G V++ +
Sbjct: 429 CLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQ 488
Query: 401 HVLRE 405
+
Sbjct: 489 EFFSQ 493
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/237 (17%), Positives = 102/237 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+ +I+ + Q+ A + L M + G+ D+VT+ +V + + + A +++
Sbjct: 226 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 285
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+G D +Y +++ + + ++ +E++ + + Y AL+ G +
Sbjct: 286 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 345
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A R+ + ITP+ + L++A+ G+ +A F+ M + ++P + ++
Sbjct: 346 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 405
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLR 409
+ ++++ A + + G + + TL F + VE+ + RE R
Sbjct: 406 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR 462
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/208 (15%), Positives = 80/208 (38%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I +++K++ K + + M+ G + T ++++ + + L +A
Sbjct: 694 SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVL 753
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ LG + + S++ Y + + L+ +M + + L+ G ++
Sbjct: 754 GKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLH 813
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
+ A + + + G PD +++N G + A+ M + LEP
Sbjct: 814 NKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIY 873
Query: 349 ALILSACEKENQLNRALEFLIDLERDGF 376
I+ K ++ AL ++E G
Sbjct: 874 NTIIDGLCKYKHMDDALNLFKEMETKGI 901
>gi|255660896|gb|ACU25617.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 484
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 113/243 (46%), Gaps = 6/243 (2%)
Query: 141 VLKQLKLMEHPL-YLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR 199
VL K EH L + + E + L FE N + KII G+ ++ +A LL M ++
Sbjct: 18 VLHSSKTSEHALQFFRWVERSNL---FEHNRETHLKIIEILGRASKLNHARCILLDMPKK 74
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G D+ +M+ Y K G ++ + + F++++ LG +SY ++ +R G
Sbjct: 75 GLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMA 134
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+ +M ++ + + ++ G+ ++G E A R FE ++ I+PD +IN
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMING 194
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
Y + ++A F M+ +EP+ ++ +Q++ AL + +++ GF +
Sbjct: 195 YYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK--GFGIK 252
Query: 380 KEA 382
A
Sbjct: 253 PNA 255
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 8/202 (3%)
Query: 163 EESFEANIRDYT---KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
E E I+ Y K+I G+ M + N +L+ G + T VM+ + +G
Sbjct: 108 ELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLS---EGIEPTRHTFNVMIWGFFLSG 164
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A FE++K D +Y +M+ Y R ++ E EM + + Y
Sbjct: 165 KVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYT 224
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L++GY + A R+ E ++ GI P+A + L+ A + +A + M
Sbjct: 225 TLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDK 284
Query: 340 GLEPSDKCV--ALILSACEKEN 359
L P+D + LI S C+ N
Sbjct: 285 YLAPTDNXIFMRLISSHCKSGN 306
>gi|255660882|gb|ACU25610.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
Length = 484
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 113/243 (46%), Gaps = 6/243 (2%)
Query: 141 VLKQLKLMEHPL-YLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR 199
VL K EH L + + E + L FE N + KII G+ ++ +A LL M ++
Sbjct: 18 VLHSSKTSEHALQFFRWVERSNL---FEHNRETHLKIIEILGRASKLNHARCILLDMPKK 74
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G D+ +M+ Y K G ++ + + F++++ LG +SY ++ +R G
Sbjct: 75 GLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMA 134
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+ +M ++ + + ++ G+ ++G E A R FE ++ I+PD +IN
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMING 194
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
Y + ++A F M+ +EP+ ++ +Q++ AL + +++ GF +
Sbjct: 195 YYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK--GFGIK 252
Query: 380 KEA 382
A
Sbjct: 253 PNA 255
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 8/202 (3%)
Query: 163 EESFEANIRDYT---KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
E E I+ Y K+I G+ M + N +L+ G + T VM+ + +G
Sbjct: 108 ELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLS---EGIEPTRHTFNVMIWGFFLSG 164
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A FE++K D +Y +M+ Y R ++ E EM + + Y
Sbjct: 165 KVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYT 224
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L++GY + A R+ E ++ GI P+A + L+ A + +A + M
Sbjct: 225 TLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDK 284
Query: 340 GLEPSDKCV--ALILSACEKEN 359
L P+D + LI S C+ N
Sbjct: 285 YLAPTDNSIFMRLISSHCKSGN 306
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 71/162 (43%), Gaps = 1/162 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y +I+GY + +++ AE + MK R VT T ++ Y + A
Sbjct: 184 DVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLV 243
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM-DAQEVYVGSEVYKALLRGYSM 287
EE+K G + +Y +++ A + V+L+EM D + ++ L+ +
Sbjct: 244 EEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCK 303
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
+GN + A V +A+ + +A LI + GQ KA
Sbjct: 304 SGNLDAAADVLKAMIRLSVPTEAGHYGXLIENFCKVGQYDKA 345
>gi|356513567|ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 857
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 94/208 (45%), Gaps = 1/208 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
EE+ E N++ Y +I GK ++A+ LL M +G + T ++ + +A +
Sbjct: 408 EENVEPNMQTYEGLIFACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAALYE 467
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A F + +G +Y S++ A+ R G+ E +L M+ + + ++
Sbjct: 468 EALVMFNTMNEVGSNPTVETYNSLIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVI 527
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
+ G E A + + ++ A P+ +++ Y AG + FQ ++ +G+
Sbjct: 528 EAFRQGGQYEEAVKSYVEMEKANCEPNELTLEAVLSIYCSAGLVDEGEEQFQEIKASGIL 587
Query: 343 PSDKCVALILSACEKENQLNRALEFLID 370
PS C ++L+ K ++LN A LID
Sbjct: 588 PSVMCYCMMLALYAKNDRLNDAYN-LID 614
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 101/262 (38%), Gaps = 13/262 (4%)
Query: 137 DWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAM 196
DW +L M H E + ++ Y ++ + AE M
Sbjct: 220 DWEGLLGLFAEMRH-------------EGIQPDVITYNTLLGACAHRGLGDEAEMVFRTM 266
Query: 197 KRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGML 256
G + D T + +V + K L+ E E++ G D SY ++ AY G +
Sbjct: 267 NESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMECGGNLPDITSYNVLLEAYAELGSI 326
Query: 257 DRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALL 316
+ R+M A + Y LL Y +G + + +F ++ + PDA +L
Sbjct: 327 KEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNIL 386
Query: 317 INAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
I + G ++ T F +M + +EP+ + ++ AC K A + L+ + G
Sbjct: 387 IQVFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLIFACGKGGLYEDAKKILLHMNEKGV 446
Query: 377 MVGKEASCTLAAWFKRLGVVEE 398
+ +A + F + + EE
Sbjct: 447 VPSSKAYTGVIEAFGQAALYEE 468
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 73/176 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I Y ++ Y + I+ A M+ G + + T +V++ +Y K G + F
Sbjct: 309 DITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLF 368
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E+K+ D +Y ++ + G L +M + V + Y+ L+
Sbjct: 369 LEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLIFACGKG 428
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
G E A+++ + G+ P ++ +I A+ A ++A F M + G P+
Sbjct: 429 GLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMNEVGSNPT 484
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/287 (19%), Positives = 114/287 (39%), Gaps = 28/287 (9%)
Query: 112 CVSPETGNLS--DLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAE------LALL- 162
C+ P LS D + F +R DW L+ K M+ ++ + E + LL
Sbjct: 88 CLDPFKNKLSLNDFALVFKEF--AQRGDWQRSLRLFKYMQRQIWCKPNEHIHTIMITLLG 145
Query: 163 --------EESFEA--------NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQV 206
E F+ + YT II+ YG+ Q + L MK+ +
Sbjct: 146 REGLLDKCREVFDEMPSNGVVRTVYSYTAIINAYGRNGQFHASLELLNGMKQERVSPSIL 205
Query: 207 TLTVMVVMYSKAG-NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLRE 265
T ++ ++ G + + F E++ G D +Y +++ A G+ D E++ R
Sbjct: 206 TYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRT 265
Query: 266 MDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQ 325
M+ + Y L++ + E + ++ G PD +L+ AY G
Sbjct: 266 MNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMECGGNLPDITSYNVLLEAYAELGS 325
Query: 326 SQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLE 372
++A F+ M+ AG + +++L+ K + + + ++++
Sbjct: 326 IKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEMK 372
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/260 (19%), Positives = 106/260 (40%), Gaps = 35/260 (13%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK----- 222
AN Y+ +++ YGK + + + L MK D T +++ ++ + G K
Sbjct: 343 ANAATYSVLLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTL 402
Query: 223 ---MAEE-------TFEEI--------------KLL------GEPLDKRSYGSMVMAYVR 252
MAEE T+E + K+L G ++Y ++ A+ +
Sbjct: 403 FHDMAEENVEPNMQTYEGLIFACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQ 462
Query: 253 AGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARM 312
A + + V+ M+ E Y +L+ ++ G + A+ + + +G+ D
Sbjct: 463 AALYEEALVMFNTMNEVGSNPTVETYNSLIHAFARGGLYKEAEAILSRMNESGLKRDVHS 522
Query: 313 CALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLE 372
+I A++ GQ ++A ++ M KA EP++ + +LS ++ E +++
Sbjct: 523 FNGVIEAFRQGGQYEEAVKSYVEMEKANCEPNELTLEAVLSIYCSAGLVDEGEEQFQEIK 582
Query: 373 RDGFMVGKEASCTLAAWFKR 392
G + C + A + +
Sbjct: 583 ASGILPSVMCYCMMLALYAK 602
>gi|255660866|gb|ACU25602.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
Length = 484
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 111/237 (46%), Gaps = 6/237 (2%)
Query: 141 VLKQLKLMEHPL-YLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR 199
VL K EH L + + E + L FE N + KII G+ ++ +A LL M ++
Sbjct: 18 VLHSSKTSEHALQFFRWVERSNL---FEHNRETHLKIIEILGRASKLNHARCILLDMPKK 74
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G D+ +M+ Y K G ++ + + F++++ LG +SY ++ +R G
Sbjct: 75 GLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMA 134
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+ +M ++ + + ++ G+ ++G E A R FE ++ I+PD +IN
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMING 194
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
Y + ++A F M+ +EP+ ++ +Q++ AL + +++ GF
Sbjct: 195 YYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK--GF 249
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 8/202 (3%)
Query: 163 EESFEANIRDYT---KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
E E I+ Y K+I G+ M + N +L+ G + T VM+ + +G
Sbjct: 108 ELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLS---EGIEPTRHTFNVMIWGFFLSG 164
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A FE++K D +Y +M+ Y R ++ E EM + + Y
Sbjct: 165 KVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYT 224
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L++GY + A R+ E ++ GI P+ + L+ A + +A + M
Sbjct: 225 TLIKGYVSVDQVDDALRLVEEMKGFGIKPNTITYSTLLPGLCNAEKMSEARVILKEMMDK 284
Query: 340 GLEPSDKCV--ALILSACEKEN 359
L P+D + LI S C+ N
Sbjct: 285 YLAPTDNSIFMRLISSHCKSGN 306
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 71/162 (43%), Gaps = 1/162 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y +I+GY + +++ AE + MK R VT T ++ Y + A
Sbjct: 184 DVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLV 243
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM-DAQEVYVGSEVYKALLRGYSM 287
EE+K G + +Y +++ A + V+L+EM D + ++ L+ +
Sbjct: 244 EEMKGFGIKPNTITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCK 303
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
+GN + A V +A+ + +A LI + GQ KA
Sbjct: 304 SGNPDAAADVLKAMIRLSVPTEAGHYGXLIXNFCKVGQYDKA 345
>gi|356574121|ref|XP_003555200.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Glycine max]
Length = 548
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 106/223 (47%), Gaps = 6/223 (2%)
Query: 153 YLQVAELALLEESFEA----NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTL 208
Y + E+ + +++FE+ ++R ++ +I GY K + A M+ G ++VT+
Sbjct: 190 YAKCGEMVMAQKAFESMSEKDVRSWSSLIDGYVKAGEYSEAMAIFEKMQSAGPKANEVTM 249
Query: 209 TVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
+ + G L+ ++ I G PL S+V Y + G ++ ++ R +
Sbjct: 250 VSVSCACAHMGALEKGRMIYKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLIFRRVSK 309
Query: 269 QEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
+ V ++ A++ G + +G E + ++F+ +Q GI PD L+ A G ++
Sbjct: 310 SQTDV--LIWNAVIGGLATHGLVEESLKLFKEMQIVGICPDEVTYLCLLAACAHGGLVKE 367
Query: 329 AYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDL 371
A+ F+++ K G+ P+ + A ++ + QL A +F+ +
Sbjct: 368 AWFFFESLSKCGMTPTSEHYACMVDVLARAGQLTTAYQFICQM 410
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 99/251 (39%), Gaps = 24/251 (9%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
I + II GY + + L M R G D +T +V ++ N +
Sbjct: 78 TIFSWNTIIRGYSNSKNPIQSLSIFLKMLRLGVAPDYLTYPFLVKASARLLNQETGVSVH 137
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE-----VYKALLR 283
I G D+ S++ Y G M AQ+V+ + + ++L
Sbjct: 138 AHIIKTGHESDRFIQNSLIHMYAACG---------NSMWAQKVFDSIQQKNVVSWNSMLD 188
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
GY+ G AQ+ FE++ D R + LI+ Y AG+ +A F+ M+ AG +
Sbjct: 189 GYAKCGEMVMAQKAFESMS----EKDVRSWSSLIDGYVKAGEYSEAMAIFEKMQSAGPKA 244
Query: 344 SDKCVALILSACEKENQLNRA---LEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
++ + + AC L + ++++D +G + +L + + G +EE
Sbjct: 245 NEVTMVSVSCACAHMGALEKGRMIYKYIVD---NGLPLTLVLQTSLVDMYAKCGAIEEAL 301
Query: 401 HVLREYGLRET 411
+ R +T
Sbjct: 302 LIFRRVSKSQT 312
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/202 (18%), Positives = 83/202 (41%), Gaps = 10/202 (4%)
Query: 106 FVKQIICVS--PETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLE 163
F+ +I+C S +G+++ + + P W +++ ++P+ L +L
Sbjct: 48 FISKILCFSALSNSGDINYSYRVFSQLSSPTIFSWNTIIRGYSNSKNPIQSLSIFLKMLR 107
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ Y ++ + + + + + + G D+ ++ MY+ GN
Sbjct: 108 LGVAPDYLTYPFLVKASARLLNQETGVSVHAHIIKTGHESDRFIQNSLIHMYAACGNSMW 167
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A++ F+ I + + S+ SM+ Y + G + + M ++V + +L+
Sbjct: 168 AQKVFDSI----QQKNVVSWNSMLDGYAKCGEMVMAQKAFESMSEKDV----RSWSSLID 219
Query: 284 GYSMNGNSEGAQRVFEAIQFAG 305
GY G A +FE +Q AG
Sbjct: 220 GYVKAGEYSEAMAIFEKMQSAG 241
>gi|15238925|ref|NP_199046.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75154282|sp|Q8L844.1|PP413_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g42310, mitochondrial; Flags: Precursor
gi|21539517|gb|AAM53311.1| maize crp1 protein-like [Arabidopsis thaliana]
gi|332007411|gb|AED94794.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 709
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 92/202 (45%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ E +++ II G+ K A L + G TL ++ + +G
Sbjct: 263 DKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLE 322
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
AE FEE++ G R+Y +++ YV+ G L E ++ EM+ + V Y L+
Sbjct: 323 AEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLID 382
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
Y G E A+ V + ++ + P++ + + L+ ++ G+ QK + + M+ G++P
Sbjct: 383 AYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKP 442
Query: 344 SDKCVALILSACEKENQLNRAL 365
+ +++ K N L+ A+
Sbjct: 443 DRQFYNVVIDTFGKFNCLDHAM 464
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 102/233 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I +GK + +A T M G D+VT ++ + K G +AEE FE ++
Sbjct: 447 YNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAME 506
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G +Y M+ +Y D + LL +M +Q + + L+ Y +G
Sbjct: 507 RRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFN 566
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A E ++ G+ P + M LINAY G S++A AF+ M GL+PS + ++
Sbjct: 567 DAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLI 626
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+A ++ + A L ++ +G TL R+ ++V V E
Sbjct: 627 NAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEE 679
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 2/162 (1%)
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
Y K G LK AE E++ G D+ +Y ++ AYV AG + ++L+EM+A +V
Sbjct: 349 YVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPN 408
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
S V+ LL G+ G + +V + ++ G+ PD + ++I+ + A T F
Sbjct: 409 SFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFD 468
Query: 335 NMRKAGLEPSDKCVALILSACE-KENQLNRALEFLIDLERDG 375
M G+EP D+ L C K + A E +ER G
Sbjct: 469 RMLSEGIEP-DRVTWNTLIDCHCKHGRHIVAEEMFEAMERRG 509
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 8/210 (3%)
Query: 163 EESFEANIR--------DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
EE FEA R Y +I+ YG + + + + L MK +G + + VT T +V +
Sbjct: 499 EEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDV 558
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
Y K+G A E EE+K +G Y +++ AY + G+ ++ R M + +
Sbjct: 559 YGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPS 618
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+L+ + + A V + ++ G+ PD L+ A + QK ++
Sbjct: 619 LLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYE 678
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRA 364
M +G +P K +++ SA Q RA
Sbjct: 679 EMIMSGCKPDRKARSMLRSALRYMKQTLRA 708
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 80/183 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L E E + + +I + K + AE AM+RRG + T +M+ Y
Sbjct: 470 MLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQER 529
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ ++K G + ++ ++V Y ++G + L EM + + S +Y A
Sbjct: 530 WDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNA 589
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ Y+ G SE A F + G+ P LINA+ + +A+ Q M++ G
Sbjct: 590 LINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENG 649
Query: 341 LEP 343
++P
Sbjct: 650 VKP 652
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/215 (18%), Positives = 96/215 (44%), Gaps = 2/215 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLL--AMKRRGFICDQVTLTVMVVMYSKAGN 220
++ ++++ +Y+ +I + +I + L ++R D + +++ ++K+G+
Sbjct: 225 QDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGD 284
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A + + G + S++ A +G E L E+ + + Y A
Sbjct: 285 PSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNA 344
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL+GY G + A+ + ++ G++PD +LLI+AY AG+ + A + M
Sbjct: 345 LLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGD 404
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
++P+ + +L+ + + + L +++ G
Sbjct: 405 VQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIG 439
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 100/235 (42%), Gaps = 2/235 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK--MAEETFEE 230
Y +I + I+ A N + M++ G+ D V ++++ +++ + M ++E
Sbjct: 200 YNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKE 259
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
I+ LD + ++M + ++G + LL A + + +++ + +G
Sbjct: 260 IERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGR 319
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
+ A+ +FE ++ +GI P R L+ Y G + A + M K G+ P + +L
Sbjct: 320 TLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSL 379
Query: 351 ILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A + A L ++E L A F+ G ++ VL+E
Sbjct: 380 LIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKE 434
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/284 (19%), Positives = 114/284 (40%), Gaps = 39/284 (13%)
Query: 160 ALLEESFEANI----RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
AL EE ++ I R Y ++ GY K +++AE+ + M++RG D+ T ++++ Y
Sbjct: 325 ALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAY 384
Query: 216 SKAGNLKMA--------------------------------EETFE---EIKLLGEPLDK 240
AG + A ++TF+ E+K +G D+
Sbjct: 385 VNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDR 444
Query: 241 RSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEA 300
+ Y ++ + + LD M ++ + + L+ + +G A+ +FEA
Sbjct: 445 QFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEA 504
Query: 301 IQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQ 360
++ G P A ++IN+Y + M+ G+ P+ ++ K +
Sbjct: 505 MERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGR 564
Query: 361 LNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
N A+E L +++ G L + + G+ E+ + R
Sbjct: 565 FNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFR 608
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/204 (18%), Positives = 85/204 (41%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+++++ G+ + + Q L MK G D+ V++ + K L A TF+ +
Sbjct: 412 FSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRML 471
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D+ ++ +++ + + G E + M+ + + Y ++ Y +
Sbjct: 472 SEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWD 531
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
+R+ ++ GI P+ L++ Y +G+ A + M+ GL+PS ++
Sbjct: 532 DMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALI 591
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
+A + +A+ + DG
Sbjct: 592 NAYAQRGLSEQAVNAFRVMTSDGL 615
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 135/354 (38%), Gaps = 38/354 (10%)
Query: 11 RSYSAYQVFDEITAPKPGLRLSWRNLSLHRKPAKWSRSLRSGPALEAIKAE-------DM 63
R AYQ+FD+ T L P S + G LE E DM
Sbjct: 767 RELYAYQIFDKFTK------------KLGISPTLASYNCLIGELLEVHYTEKAWDLFKDM 814
Query: 64 GKTQVKDDTSMFTWIQIGPNITEEQKQAISQFPRKMTKRCK--AFVKQIICVSPETGNLS 121
D F + + + + + +++RCK A I+ S N
Sbjct: 815 KNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSN-- 872
Query: 122 DLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEES---FE--------ANI 170
+L A F +D+ + PL +A++ LEE+ FE N
Sbjct: 873 NLDKALDFFYDLVSSDFRPTPRTYG----PLIDGLAKVGRLEEAMRLFEEMSDYGCKPNC 928
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
+ +I+GYGK + A M G D + T++V AG + A F E
Sbjct: 929 AIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNE 988
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
+K G D +Y ++ ++ ++ L EM + + Y +L+ + G
Sbjct: 989 LKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGM 1048
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
E A+R++E +Q AG+ PD LI Y ++ + AYT ++NM G P+
Sbjct: 1049 VEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPN 1102
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 88/180 (48%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M+ G++ D VT T++V + KA + A TF+ ++ G + +Y +++ +RAG
Sbjct: 358 MEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGR 417
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
++ LL M++ V + Y + + +G + A FE ++ GI P+ C
Sbjct: 418 IEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNA 477
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+ + G+ ++A T F +R+ GL P +++ K Q++ A+ L ++ R+G
Sbjct: 478 SLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNG 537
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 90/205 (43%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D +T +++ +K+ NL A + F ++ R+YG ++ + G L+ L
Sbjct: 857 DAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLF 916
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
EM ++ L+ GY G++E A ++F+ + GI PD + +L++ +A
Sbjct: 917 EEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLA 976
Query: 324 GQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEAS 383
G+ +A F ++ GL+P I++ K ++ AL ++ G +
Sbjct: 977 GRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTY 1036
Query: 384 CTLAAWFKRLGVVEEVEHVLREYGL 408
+L G+VE+ + + E L
Sbjct: 1037 NSLMLNLGLAGMVEQAKRMYEELQL 1061
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 100/243 (41%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+E ++ YT +I Q++NA+ + MK G DQV ++ ++ G+L
Sbjct: 290 DEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLD 349
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
+E + +++ G D ++ +V +A D M Q + Y L+
Sbjct: 350 TFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLI 409
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G G E A ++ ++ G+ P A + I+ + +G++ KA F+ M+ G+
Sbjct: 410 CGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIV 469
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ L + + +L A L +G + + ++G V+E ++
Sbjct: 470 PNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNL 529
Query: 403 LRE 405
L E
Sbjct: 530 LSE 532
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 86/200 (43%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I G + +I++A L M+ G T + + + K+G A ETF
Sbjct: 401 NLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETF 460
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++K G + + + + + G L + + + + S Y +++ YS
Sbjct: 461 EKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKV 520
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A + + G PD + LI++ AG+ +A+ F M+ L P+
Sbjct: 521 GQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTY 580
Query: 349 ALILSACEKENQLNRALEFL 368
+LS KE ++ +A+E
Sbjct: 581 NTLLSGLGKEGRVQKAIELF 600
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 93/215 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ E + +++ Y+ ++ GKK + L M+ G + T T+ + + +AG
Sbjct: 218 MVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGK 277
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A E F + G D +Y ++ A AG L+ + L +M A +Y
Sbjct: 278 IDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYIT 337
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL ++ G+ + + + ++ G PD +L++ A +A+ F MRK G
Sbjct: 338 LLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQG 397
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+ P+ ++ + ++ AL+ L +E G
Sbjct: 398 ILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVG 432
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 87/222 (39%), Gaps = 1/222 (0%)
Query: 185 QIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYG 244
+++ A+ ++ G D VT +M+ YSK G + A E+ G D
Sbjct: 487 RLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVN 546
Query: 245 SMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFA 304
S++ + +AG +D + M ++ Y LL G G + A +FE++
Sbjct: 547 SLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEK 606
Query: 305 GITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
+P+ L++ + + + A F M +P ++ KEN++N A
Sbjct: 607 KCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHA 666
Query: 365 LEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREY 406
F L++ CTL + G + + + R++
Sbjct: 667 FWFFHQLKK-SMHPDHVTICTLLPGLVKCGQIGDAISIARDF 707
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 85/209 (40%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y I + ++ L M++ GF+ + + ++ + ++G A E +
Sbjct: 156 DLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVY 215
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ G ++Y ++++A + + VLL+EM+ + + +R
Sbjct: 216 RRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRA 275
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A +F + G PD +LI+A AGQ + A F M+ G +P
Sbjct: 276 GKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIY 335
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFM 377
+L L+ EF +E DG+M
Sbjct: 336 ITLLDKFNDFGDLDTFKEFWSQMEADGYM 364
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/176 (19%), Positives = 70/176 (39%)
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
G L+ +++ G L+ SY ++ +++G + R M ++ + + Y
Sbjct: 171 GGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTY 230
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
AL+ +SE + + ++ G+ P+ + I AG+ +AY F+ M
Sbjct: 231 SALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDD 290
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
G P +++ A QL A E + ++ +G + TL F G
Sbjct: 291 EGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFG 346
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
+E A +F+ ++ G PDA +L+ + +G+ + + ++ M +P +
Sbjct: 804 TEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNI 863
Query: 351 ILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE---YG 407
++S+ K N L++AL+F DL F L ++G +EE + E YG
Sbjct: 864 VISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYG 923
Query: 408 LR 409
+
Sbjct: 924 CK 925
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 62/320 (19%), Positives = 117/320 (36%), Gaps = 12/320 (3%)
Query: 91 AISQFPRKM--TKRCKAFVKQIICVSPETGNLSDLLAAWVRFMKPR--RAD---WLAVLK 143
+IS+FP + T+ C F+ + + V + ++ AA FM+ + R D +L + K
Sbjct: 111 SISEFPTVLHTTETCN-FMLEFLRVHDKVEDM----AAVFEFMQKKIIRRDLDTYLTIFK 165
Query: 144 QLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFIC 203
L + + + + F N Y +IH + A M G
Sbjct: 166 ALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKP 225
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
T + ++V K + +M +E++ LG + ++ + RAG +D +
Sbjct: 226 SLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIF 285
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
R MD + Y L+ G E A+ +F ++ G PD + L++ +
Sbjct: 286 RRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDF 345
Query: 324 GQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEAS 383
G + M G P +++ K + A + + G +
Sbjct: 346 GDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTY 405
Query: 384 CTLAAWFKRLGVVEEVEHVL 403
TL R G +E+ +L
Sbjct: 406 NTLICGLLRAGRIEDALKLL 425
>gi|255660870|gb|ACU25604.1| pentatricopeptide repeat-containing protein [Verbena halei]
Length = 476
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 110/238 (46%), Gaps = 8/238 (3%)
Query: 141 VLKQLKLMEHPLYLQVAELALLEES--FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKR 198
VL K EH + +E S FE N + KII G+ ++ +A LL M +
Sbjct: 10 VLHSSKTSEHAFHF----FRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPK 65
Query: 199 RGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDR 258
+G D+ +M+ Y K G ++ + + F++++ LG +SY ++ +R G
Sbjct: 66 KGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMM 125
Query: 259 GEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLIN 318
G+ +M ++ + + ++ G+ ++G E A R FE ++ I+PD +IN
Sbjct: 126 GKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAIRFFEDMKSREISPDVVTYNTMIN 185
Query: 319 AYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
Y + ++A F M+ +EP+ ++ +Q++ AL + +++ GF
Sbjct: 186 GYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK--GF 241
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 73/162 (45%), Gaps = 1/162 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y +I+GY + +++ AE + MK R VT T ++ Y + A
Sbjct: 176 DVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLV 235
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM-DAQEVYVGSEVYKALLRGYSM 287
EE+K G + +Y +++ A + V+L+EM D + ++ L+ +
Sbjct: 236 EEMKGFGTKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCK 295
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
+GN + A V +A+ + +A LLI + AGQ KA
Sbjct: 296 SGNLDAAADVLKAMIRLSVPTEAGHYGLLIENFCKAGQYDKA 337
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 8/202 (3%)
Query: 163 EESFEANIRDYT---KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
E E I+ Y K+I G+ M + N +L+ G + T VM+ + +G
Sbjct: 100 ELGVERTIKSYNALFKVILRRGRYMMGKRYFNKMLS---EGIEPTRHTFNVMIWGFFLSG 156
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A FE++K D +Y +M+ Y R ++ E EM + + Y
Sbjct: 157 KVETAIRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYT 216
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L++GY + A R+ E ++ G P+A + L+ A + +A + M
Sbjct: 217 TLIKGYVSVDQVDDALRLVEEMKGFGTKPNAITYSTLLPGLCNAEKMSEARVILKEMMDK 276
Query: 340 GLEPSDKCV--ALILSACEKEN 359
L P+D + LI S C+ N
Sbjct: 277 YLAPTDNSIFMRLISSHCKSGN 298
>gi|125553513|gb|EAY99222.1| hypothetical protein OsI_21180 [Oryza sativa Indica Group]
Length = 818
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 4/152 (2%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D T T +V MY+K G L A++ F+ + E + ++ S+V Y AG D L+
Sbjct: 308 DVYTGTALVDMYAKCGRLDCAQKVFDAL----EHRNLTTWNSLVAGYANAGRFDIALELV 363
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
M + + L+ GYSMNG S A + I+ AG+TP+ LI+
Sbjct: 364 ELMKKNRLDPDITTWNGLITGYSMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHN 423
Query: 324 GQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
G+ + ++ M+K G++PS ++++L AC
Sbjct: 424 GEYEDSFYFCHEMQKDGVQPSLVTMSVLLRAC 455
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 95/212 (44%), Gaps = 10/212 (4%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E N+ + ++ G + + + A + +M ++G D T++ ++ + G L+ E
Sbjct: 236 EPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGME 295
Query: 227 T---FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
F +L EP D + ++V Y + G LD + + ++ + + + +L+
Sbjct: 296 IHCFFLRNQL--EP-DVYTGTALVDMYAKCGRLDCAQKVFDALEHRNL----TTWNSLVA 348
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
GY+ G + A + E ++ + PD LI Y M GQS +A + ++ AG+ P
Sbjct: 349 GYANAGRFDIALELVELMKKNRLDPDITTWNGLITGYSMNGQSSQAVLLLRQIKAAGVTP 408
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDG 375
+ ++S + + F ++++DG
Sbjct: 409 NVVSWTSLISGSCHNGEYEDSFYFCHEMQKDG 440
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 56/287 (19%), Positives = 102/287 (35%), Gaps = 44/287 (15%)
Query: 152 LYLQVAELALLEESFEA----NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVT 207
+Y + L ++ F+A N+ + ++ GY + A + MK+ D T
Sbjct: 318 MYAKCGRLDCAQKVFDALEHRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDITT 377
Query: 208 LTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMD 267
++ YS G A +IK G + S+ S++ G + EM
Sbjct: 378 WNGLITGYSMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQ 437
Query: 268 AQEVYV--------------------GSEVY---------------KALLRGYSMNGNSE 292
V G E++ AL+ YS G+
Sbjct: 438 KDGVQPSLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLV 497
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ +FE+IQ + +C ++ + GQ ++A F +M +GL+P +L
Sbjct: 498 SAKVIFESIQQKNLV----LCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALL 553
Query: 353 SACEKENQLNRALEFLIDLE-RDGFMVGKEASCTLAAWFKRLGVVEE 398
+AC + E+ +E + G E + R G ++E
Sbjct: 554 TACRSMGLVTEGWEYFDGMETKYGVKPTTENYACMVDLLARCGYLDE 600
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 82/176 (46%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y +I+G+ K+ ++ A M RRG VT T ++ SK G ++ ++ F
Sbjct: 326 DVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLF 385
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E G D Y +++ ++ +G +DR ++ EM+ + + Y L+RG +
Sbjct: 386 DEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLL 445
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
G + A+++ + + GI PD LI+ Y M G + A M G P+
Sbjct: 446 GRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPT 501
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 2/199 (1%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
A + YT +I+ KK Q+Q + RRG D V ++ +S +GN+ A E
Sbjct: 360 ATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEI 419
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
E++ D +Y +++ G +D L+ EM + + Y L+ GYSM
Sbjct: 420 MGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSM 479
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G+ + A R+ + G P LI GQ A + M + G+ P D
Sbjct: 480 KGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDST 539
Query: 348 VALILSACEKENQLNRALE 366
++ E++ RA++
Sbjct: 540 YISLIEGLTTEDE--RAID 556
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 94/220 (42%), Gaps = 2/220 (0%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFIC-DQVTLTVMVVMYSK 217
L LL + N Y +I G+ + ++Q A + + M+ RG I +Q T ++ + K
Sbjct: 174 LELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCK 233
Query: 218 AGNLKMAEETFEEIKLLGE-PLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
G + A + F+E+ GE + Y +++ Y G LD + M + V +
Sbjct: 234 VGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVA 293
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
Y L+ M+G A + E + G+ D +LIN + G +KA F+NM
Sbjct: 294 TYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENM 353
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+ G+ + ++ A K+ Q+ + + R G
Sbjct: 354 SRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGI 393
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 87/216 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E + Y ++H + A + M +G D T +++ + K GN
Sbjct: 283 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGN 342
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+K A E FE + G +Y S++ A + G + + L E + + +Y A
Sbjct: 343 VKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNA 402
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ +S +GN + A + ++ I PD L+ + G+ +A M K G
Sbjct: 403 LINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRG 462
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
++P ++S + + AL ++ GF
Sbjct: 463 IQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGF 498
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 91/233 (39%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I GY + ++ A M RG T ++V G A E EE+
Sbjct: 260 YNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMG 319
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G LD +Y ++ + + G + + + M + V Y +L+ S G +
Sbjct: 320 GKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQ 379
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
++F+ GI PD + LIN++ +G +A+ M K + P D ++
Sbjct: 380 ETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLM 439
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+++ A + + ++ + G TL + + G V++ + E
Sbjct: 440 RGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNE 492
>gi|410110111|gb|AFV61135.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
duartei]
Length = 381
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 101/212 (47%), Gaps = 4/212 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 173 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDR 232
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ + +M++AY RAG++ + LL E+ + + + +L
Sbjct: 233 AAXLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDTAIHILA 291
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + F MR G P
Sbjct: 292 G---AGRIEEATYVFRQXIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFP 348
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDG 375
+A++L+A K + ++A + ++++ G
Sbjct: 349 DSDVIAIVLNAYGKLQEFDKANDVYMEMQEVG 380
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 102/237 (43%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 73 NTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 132
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 133 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 192
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G+E
Sbjct: 193 LEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAXLFQKLRSSGVEIDQILF 252
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE +V R+
Sbjct: 253 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGA----GRIEEATYVFRQ 305
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 102/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + MK G + + + + ++ MY + A
Sbjct: 35 FXPDLVAYNAMINVFGKAKLFREARSLIGEMKTAGVMPNTTSYSTLLTMYVENKKFLEAL 94
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 95 SVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 154
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + ++ Y + +KA Q M+ G+E
Sbjct: 155 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIE 211
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 212 PNSITYSTIISIWGKVGKLDRAAXLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRL 271
Query: 403 LRE 405
L E
Sbjct: 272 LHE 274
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 61/141 (43%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D V + ++ + K + A F +K LG D +Y +M+ + +A + L+
Sbjct: 3 DLVLYSNLIELSRKLCDYSKAISIFSRLKRLGFXPDLVAYNAMINVFGKAKLFREARSLI 62
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
EM V + Y LL Y N A VF ++ D C ++I+ Y
Sbjct: 63 GEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 122
Query: 324 GQSQKAYTAFQNMRKAGLEPS 344
G +++A F MRK G+EP+
Sbjct: 123 GMAKEADKLFWGMRKMGIEPN 143
>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
Length = 1139
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 103/244 (42%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
E N Y +IH K+ I++A M+ +G ++ Y K G+L A
Sbjct: 369 LEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRAR 428
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+ G SY ++ R G L L REM + + + + AL+ G+
Sbjct: 429 GLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGF 488
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
+ + A R+F+ + + + P+ ++I Y + G +KA+ + M + GL+P +
Sbjct: 489 CKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDN 548
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++S + +++A EF+ DLE ++ + L F R G E H+ E
Sbjct: 549 YTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDE 608
Query: 406 YGLR 409
+R
Sbjct: 609 MAVR 612
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/214 (19%), Positives = 92/214 (42%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E N +T +I+G+ K ++ A M I ++VT VM+ Y GN++
Sbjct: 471 ERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIR 530
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A + ++++ +G D +Y S++ + + + +++ + + ALL
Sbjct: 531 KAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALL 590
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G+ G +++ + G+ D +++ A +K+ F+ M++ G++
Sbjct: 591 YGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVK 650
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
P D ++ A KE + +AL + DG+
Sbjct: 651 PDDIFYTCMIDALSKEENMIQALNCWDQMVVDGY 684
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 101/246 (41%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
E +A+ Y +++G K M++Q A M G D+VT +V + + L+M
Sbjct: 227 EGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEM 286
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A ++ LG + + M+ + +++ L ++ + Y AL+
Sbjct: 287 ALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALID 346
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
N + A R+F+ + G+ P+ A+LI+A G + A F MR G++
Sbjct: 347 KLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKV 406
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+ +++ K+ L+RA L + ++G + L A R G + +
Sbjct: 407 TVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELH 466
Query: 404 REYGLR 409
RE R
Sbjct: 467 REMAER 472
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 5/205 (2%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I K+ + A N M G+ + VT TV++ K+G L AE +E+
Sbjct: 656 YTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEM- 714
Query: 233 LLGEPL-DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV-YKALLRGYSMNGN 290
L G L +K +Y + + G +++ + L M + ++ S V + L++G G
Sbjct: 715 LAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM--LQGHLASIVSFNILIKGLCKAGK 772
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
+ A + I +G +PD + +I+ G KA+ + M GL+P +
Sbjct: 773 IQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNI 832
Query: 351 ILSACEKENQLNRALEFLIDLERDG 375
+ C + ++AL ++ R G
Sbjct: 833 FIRWCNVHGESDKALGIYTNMIRSG 857
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 68/168 (40%)
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G +Q T + ++ K +A + F+++ G LD+ Y + + AY + LD
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
L+ M+++ V + Y L+ G N + A V + G+T D L+
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
+ + + A +M + G PS+ + ++ K+ + A
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSL 325
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 40/227 (17%), Positives = 89/227 (39%), Gaps = 35/227 (15%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMV-------------VMYSKAG 219
Y +++G+ + +++ A M R GF+ + + M+ + K G
Sbjct: 271 YRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLG 330
Query: 220 NLKM----------------------AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLD 257
+L M A+ F+E+ G ++ +Y ++ A + GM++
Sbjct: 331 DLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIE 390
Query: 258 RGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
L +M + + V Y +L+ GY G+ + A+ + + G+TP A + LI
Sbjct: 391 DALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLI 450
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
G + M + G+ ++ +++ K+ +++ A
Sbjct: 451 AGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEA 497
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 31/184 (16%), Positives = 77/184 (41%), Gaps = 1/184 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + + N +T +I+ K + +AE M + ++ T + ++ G+
Sbjct: 679 MVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGD 738
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ A++ + L G S+ ++ +AG + L+ ++ Y
Sbjct: 739 MEKAKDLHSAM-LQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYST 797
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G+ A ++ + + G+ PD + I + G+S KA + NM ++G
Sbjct: 798 IIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSG 857
Query: 341 LEPS 344
++P+
Sbjct: 858 VQPN 861
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 96/216 (44%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+ E E N+ Y+ +++GY + ++ A M +G D + +++ Y KA
Sbjct: 357 TMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAK 416
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ A++ F E+ G D SY +++ + G L L + M Y
Sbjct: 417 RIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYS 476
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
LL G+ G A R+F A+Q + P+ M +LI+A + ++A F +
Sbjct: 477 ILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQ 536
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
GL+P+ + I++ KE L+ ALE ++E DG
Sbjct: 537 GLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDG 572
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 100/218 (45%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
++ + + ++ Y +I+GY K +I A+ M +G D V+ ++ + G
Sbjct: 392 VMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLG 451
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
L+ A + F+ + G D +Y ++ + + G L + L R M + + +Y
Sbjct: 452 RLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYN 511
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ + N + A+++F + G+ P+ ++ +IN G +A AF+NM +
Sbjct: 512 ILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEED 571
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
G P++ +I+ + +RA++ + ++ GF+
Sbjct: 572 GCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFV 609
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 97/237 (40%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
NI ++ +I+ + K+ + A L M G + VT + ++ YS + A + F
Sbjct: 331 NIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLF 390
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ + G D SY ++ Y +A + + L EM Q + Y L+ G
Sbjct: 391 DVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQL 450
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G A +F+ + G PD ++L++ + G KA+ F+ M+ L+P+
Sbjct: 451 GRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMY 510
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+++ A K L A + +L G + T+ + G+++E R
Sbjct: 511 NILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRN 567
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 45/245 (18%), Positives = 94/245 (38%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ ++ ++ YT II+G K + A M G D VT + ++ K
Sbjct: 218 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRR 277
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + F +K G + +Y S++ +L EM + + +
Sbjct: 278 VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 337
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ + GN A+ V + + G+ P+ + L+N Y + + +A F M G
Sbjct: 338 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKG 397
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+P ++++ K ++ A + ++ G + TL +LG + E
Sbjct: 398 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 457
Query: 401 HVLRE 405
+ +
Sbjct: 458 DLFKN 462
Score = 38.1 bits (87), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 28/140 (20%), Positives = 61/140 (43%)
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++++L G D + ++ + + +D G +L ++ + + + L+ G
Sbjct: 146 KQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKV 205
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G A +F+ + G PD +IN G++ A F+ M +AG +P
Sbjct: 206 GKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTY 265
Query: 349 ALILSACEKENQLNRALEFL 368
+ I+ + K+ ++N AL+
Sbjct: 266 STIIDSLCKDRRVNEALDIF 285
>gi|359495626|ref|XP_002269600.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic [Vitis vinifera]
Length = 701
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 99/233 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y + + K + AE M RG D +T + ++ + A E FE++
Sbjct: 179 YNVTLKVFRKCRNLDRAEKLFDEMLERGVKPDNITFSTIISCARVSSLPNKAVEWFEKMP 238
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +M+ AY RAG +D L ++ + + L+R Y M+GN +
Sbjct: 239 EFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSGNFD 298
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
G V+E ++ G+ P+ + L++A A + +A ++ M GL+PS A +L
Sbjct: 299 GCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQPSWGTYAALL 358
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
A + AL +++ G + TL A +G EE + +
Sbjct: 359 RAYGRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEAAAIFED 411
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 86/209 (41%), Gaps = 1/209 (0%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M G D VT + M+ Y +AGN+ MA + ++ + +D ++ +++ Y +G
Sbjct: 237 MPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSGN 296
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
D + EM A V +Y LL A+ +++ + G+ P A
Sbjct: 297 FDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQPSWGTYAA 356
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
L+ AY A ++ A ++ M++ GLE S +L+ C A D++ G
Sbjct: 357 LLRAYGRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEAAAIFEDMKSSG 416
Query: 376 -FMVGKEASCTLAAWFKRLGVVEEVEHVL 403
M +L + G V E E +L
Sbjct: 417 NCMPDSWTFSSLITIYSCSGKVSEAEAML 445
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 102/239 (42%), Gaps = 39/239 (16%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I YG+ + A + + D VT + ++ +Y +GN +EE+K
Sbjct: 249 YSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSGNFDGCLNVYEEMK 308
Query: 233 LLG-EP--------LD-----KR---------------------SYGSMVMAYVRAGMLD 257
LG +P LD KR +Y +++ AY RA +
Sbjct: 309 ALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQPSWGTYAALLRAYGRARYAE 368
Query: 258 RGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAG-ITPDARMCALL 316
++ +EM + + + +Y LL + G +E A +FE ++ +G PD+ + L
Sbjct: 369 DALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEAAAIFEDMKSSGNCMPDSWTFSSL 428
Query: 317 INAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLN---RALEFLIDLE 372
I Y +G+ +A M +AG EP+ + ++ K N+ + R + L++L+
Sbjct: 429 ITIYSCSGKVSEAEAMLNAMLEAGFEPNIFVLTSLIQCYGKANRTDEVVRTFDRLLELD 487
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 63/147 (42%), Gaps = 1/147 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ YG+ ++A MK +G V ++ M + G + A FE++K
Sbjct: 354 YAALLRAYGRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEAAAIFEDMK 413
Query: 233 LLGEPL-DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
G + D ++ S++ Y +G + E +L M V +L++ Y +
Sbjct: 414 SSGNCMPDSWTFSSLITIYSCSGKVSEAEAMLNAMLEAGFEPNIFVLTSLIQCYGKANRT 473
Query: 292 EGAQRVFEAIQFAGITPDARMCALLIN 318
+ R F+ + ITPD R C ++N
Sbjct: 474 DEVVRTFDRLLELDITPDDRFCGCMLN 500
>gi|255660890|gb|ACU25614.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 484
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 113/243 (46%), Gaps = 6/243 (2%)
Query: 141 VLKQLKLMEHPL-YLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR 199
VL K EH L + + E + L FE N + KII G+ ++ +A LL M ++
Sbjct: 18 VLHSSKTSEHALQFFRWVERSNL---FEHNRETHLKIIEILGRASKLNHARCILLDMPKK 74
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G D+ +M+ Y K G ++ + + F++++ LG +SY ++ +R G
Sbjct: 75 GLEWDEDMWVMMIDSYGKQGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMA 134
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+ +M ++ + + ++ G+ ++G E A R FE ++ I+PD +IN
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMING 194
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
Y + ++A F M+ +EP+ ++ +Q++ AL + +++ GF +
Sbjct: 195 YYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK--GFGIK 252
Query: 380 KEA 382
A
Sbjct: 253 PNA 255
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 8/202 (3%)
Query: 163 EESFEANIRDYT---KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
E E I+ Y K+I G+ M + N +L+ G + T VM+ + +G
Sbjct: 108 ELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLS---EGIEPTRHTFNVMIWGFFLSG 164
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A FE++K D +Y +M+ Y R ++ E EM + + Y
Sbjct: 165 KVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYT 224
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L++GY + A R+ E ++ GI P+A + L+ A + +A + M
Sbjct: 225 TLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDK 284
Query: 340 GLEPSDKCV--ALILSACEKEN 359
L P+D + LI S C+ N
Sbjct: 285 YLAPTDNSIFMRLISSHCKSGN 306
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 1/162 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y +I+GY + +++ AE + MK R VT T ++ Y + A
Sbjct: 184 DVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLV 243
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM-DAQEVYVGSEVYKALLRGYSM 287
EE+K G + +Y +++ A + V+L+EM D + ++ L+ +
Sbjct: 244 EEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCK 303
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
+GN + A V +A+ + +A +LI + AGQ KA
Sbjct: 304 SGNLDAAADVLKAMVRLSVPTEAGHYGVLIENFCKAGQYDKA 345
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 99/208 (47%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I +T +I GY ++ + + +RG + + VT +++V + ++G +K+AEE F
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+ G D +YG ++ G L++ + ++ ++ +G +Y ++ G
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G E A +F ++ G+ P+ ++I+ G +A + M + G P+D
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 546
Query: 349 ALILSACEKENQLNRALEFLIDLERDGF 376
++ A ++ L + + + +++ GF
Sbjct: 547 NTLIRAHLRDGDLTASAKLIEEMKSCGF 574
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 91/215 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ NI Y ++ GY + ++ A N L M R D VT T ++ Y
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 383
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ + F I G + +Y +V + ++G + E L +EM + V Y
Sbjct: 384 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 443
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL G NG E A +FE +Q + + M +I G+ + A+ F ++ G
Sbjct: 444 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKG 503
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
++P+ +++S K+ L+ A L +E DG
Sbjct: 504 VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 538
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 107/246 (43%), Gaps = 4/246 (1%)
Query: 157 AELALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMV 212
A ++L +E ++++ Y ++ G K + + L M R + + +T V++
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
Query: 213 VMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY 272
++ K G L+ A E ++E+ G + +Y +++ Y L +L M +
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365
Query: 273 VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTA 332
+ +L++GY M + +VF I G+ +A ++L+ + +G+ + A
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425
Query: 333 FQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKR 392
FQ M G+ P ++L +L +ALE DL++ +G T+ +
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 485
Query: 393 LGVVEE 398
G VE+
Sbjct: 486 GGKVED 491
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/245 (17%), Positives = 102/245 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E + ++ Y I++G + A + L M+ R D T + ++ + G
Sbjct: 184 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGC 243
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A F+E++ G +Y S+V +AG + G +LL++M ++E+ +
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL + G + A +++ + GI+P+ L++ Y M + +A M +
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
P ++ +++ ++ ++ + G + L F + G ++ E
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423
Query: 401 HVLRE 405
+ +E
Sbjct: 424 ELFQE 428
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 34/179 (18%), Positives = 77/179 (43%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
+E + + +I G + ++ A + M G D VT +V ++G+ +A
Sbjct: 154 YEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLAL 213
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+ +++ D +Y +++ + R G +D L +EM+ + + Y +L+RG
Sbjct: 214 DLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL 273
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
G + + + I P+ +L++ + G+ Q+A ++ M G+ P+
Sbjct: 274 CKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 38/198 (19%), Positives = 79/198 (39%), Gaps = 36/198 (18%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM---------------- 211
AN Y+ ++ G+ + +I+ AE M G + D +T ++
Sbjct: 401 ANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEI 460
Query: 212 ------------VVMYS-------KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVR 252
+VMY+ K G ++ A F + G + +Y M+ +
Sbjct: 461 FEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCK 520
Query: 253 AGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARM 312
G L +LLR+M+ Y L+R + +G+ + ++ E ++ G + DA
Sbjct: 521 KGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASS 580
Query: 313 CALLINAYQMAGQSQKAY 330
++I+ ++G+ K++
Sbjct: 581 IKMVIDML-LSGELDKSF 597
>gi|28393724|gb|AAO42273.1| unknown protein [Arabidopsis thaliana]
Length = 642
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 80/182 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+ GK + + A+ +K VM+ + K G L A + F E+K
Sbjct: 447 YCSLINALGKAKRYEAADELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMK 506
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +++ V+AGM++ LLR+M+ + +L G++ G
Sbjct: 507 NQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPR 566
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +FE I+ +GI PD L+ + AG ++A + M+ G E + IL
Sbjct: 567 RAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSIL 626
Query: 353 SA 354
A
Sbjct: 627 DA 628
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 80/168 (47%), Gaps = 1/168 (0%)
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREM-DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEA 300
+Y S+++ ++ G ++ + EM + + + + Y AL+ Y G ++ A R+F+
Sbjct: 199 TYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDE 258
Query: 301 IQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQ 360
++ + P ++ L+ Y G+ +KA F+ M++AG P+ ++ K +
Sbjct: 259 MKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGR 318
Query: 361 LNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGL 408
++ A F D+ RDG L ++G VEE+ +V E G+
Sbjct: 319 VDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGM 366
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 81/204 (39%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I GY K +++ A L M +GF ++ KA + A+E F+E+K
Sbjct: 412 YSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAADELFKELK 471
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ R Y M+ + + G L L EM Q Y AL+ G G
Sbjct: 472 ENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMIN 531
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + ++ G D +++N + G ++A F+ ++ +G++P +L
Sbjct: 532 EANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLL 591
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
A + +++ GF
Sbjct: 592 GCFAHAGMFEEAARMMREMKDKGF 615
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 92/237 (38%), Gaps = 1/237 (0%)
Query: 170 IRDYTKIIHG-YGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+ Y +I + K + + MK + T ++++ Y K ++ A
Sbjct: 373 VVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLL 432
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
EE+ G P +Y S++ A +A + + L +E+ V S VY +++ +
Sbjct: 433 EEMDEKGFPPCPAAYCSLINALGKAKRYEAADELFKELKENFGNVSSRVYAVMIKHFGKC 492
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G A +F ++ G PD L++ AG +A + + M + G
Sbjct: 493 GKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSH 552
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+IL+ + RA+E ++ G TL F G+ EE ++RE
Sbjct: 553 NIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMRE 609
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 74/171 (43%), Gaps = 1/171 (0%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKL 233
++++ G+ + A + K R T +++M + G + E + E+
Sbjct: 166 SELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCN 225
Query: 234 LGEPL-DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G+ D +Y +++ +Y + G D L EM + ++Y LL Y G E
Sbjct: 226 EGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVE 285
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
A +FE ++ AG +P LI AG+ +AY +++M + GL P
Sbjct: 286 KALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTP 336
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 120/301 (39%), Gaps = 10/301 (3%)
Query: 120 LSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQV----AELALLEESFEANIRDYTK 175
LS A R KP + + +V+ L LM+ + +V E+ + F I Y+
Sbjct: 182 LSVFYQAKGRKCKPTSSTYNSVI--LMLMQEGQHEKVHEVYTEMCNEGDCFPDTIT-YSA 238
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
+I Y K + +A MK + T ++ +Y K G ++ A + FEE+K G
Sbjct: 239 LISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAG 298
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
+Y ++ +AG +D ++M + L+ G E
Sbjct: 299 CSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELT 358
Query: 296 RVFEAIQFAGITPDARMCALLINA-YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSA 354
VF + TP +I A ++ + + F M+ + PS+ ++++
Sbjct: 359 NVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDG 418
Query: 355 CEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRETYSK 414
K N++ +AL L +++ GF A C+L + E + + +E L+E +
Sbjct: 419 YCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAADELFKE--LKENFGN 476
Query: 415 I 415
+
Sbjct: 477 V 477
>gi|125579821|gb|EAZ20967.1| hypothetical protein OsJ_36620 [Oryza sativa Japonica Group]
Length = 408
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 83/190 (43%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N YT +IHG+ + ++ A + L+ M RG D VT ++ AG + A
Sbjct: 79 NQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVR 138
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++ D Y ++ + ML + +L EM + V VY L+ G+ +
Sbjct: 139 EKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRS 198
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
N A+++FE ++ G+ PD C +I Y G +A NMRK G P +
Sbjct: 199 ENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTY 258
Query: 349 ALILSACEKE 358
++S K+
Sbjct: 259 TTVISGYAKQ 268
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 64/143 (44%), Gaps = 1/143 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y +I G KK + A+N L M + D+ ++ + ++ NL A + F
Sbjct: 149 DVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIF 208
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS-M 287
E ++ G D S +M+ Y + GM+ + + M Y ++ GY+
Sbjct: 209 EFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQ 268
Query: 288 NGNSEGAQRVFEAIQFAGITPDA 310
G+++ A+ +F +Q ++P+
Sbjct: 269 EGDTDSAEGLFANMQAEALSPNV 291
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 7/206 (3%)
Query: 146 KLMEHPLYLQ---VAELALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKR 198
L+ H L++ L+EE ++ Y +I+G+ K+ ++ A M R
Sbjct: 256 NLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSR 315
Query: 199 RGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDR 258
RG VT T ++ SK G ++ ++ F+E G D Y +++ ++ +G +DR
Sbjct: 316 RGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDR 375
Query: 259 GEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLIN 318
++ EM+ + + Y L+RG + G + A+++ + + GI PD LI+
Sbjct: 376 AFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLIS 435
Query: 319 AYQMAGQSQKAYTAFQNMRKAGLEPS 344
Y M G + A M G P+
Sbjct: 436 GYSMKGDVKDALRIRNEMMNKGFNPT 461
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 2/199 (1%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
A + YT +I+ KK Q+Q + RRG D V ++ +S +GN+ A E
Sbjct: 320 ATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEI 379
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
E++ D +Y +++ G +D L+ EM + + Y L+ GYSM
Sbjct: 380 MGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSM 439
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G+ + A R+ + G P LI GQ A + M + G+ P D
Sbjct: 440 KGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDST 499
Query: 348 VALILSACEKENQLNRALE 366
++ E++ RA++
Sbjct: 500 YISLIEGLTTEDE--RAID 516
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 95/220 (43%), Gaps = 2/220 (0%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFIC-DQVTLTVMVVMYSK 217
L LL + N Y +I G+ + ++Q A + + M+ RG I +Q T ++ + K
Sbjct: 134 LELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCK 193
Query: 218 AGNLKMAEETFEEIKLLGE-PLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
G + A + F+E+ GE + Y +++ Y G LD + M + V +
Sbjct: 194 VGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVA 253
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
Y L+ M+G A + E + G+ PD +LIN + G +KA F+NM
Sbjct: 254 TYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENM 313
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+ G+ + ++ A K+ Q+ + + R G
Sbjct: 314 SRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGI 353
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 68/173 (39%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I GY + ++ A M RG T ++V G A E EE+
Sbjct: 220 YNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMG 279
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y ++ + + G + + + M + V Y AL+ S G +
Sbjct: 280 GKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQ 339
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
++F+ GI PD + LIN++ +G +A+ M K + P D
Sbjct: 340 ETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDD 392
>gi|255660868|gb|ACU25603.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 484
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 113/243 (46%), Gaps = 6/243 (2%)
Query: 141 VLKQLKLMEHPL-YLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR 199
VL K EH L + + E + L FE N + KII G+ ++ +A LL M ++
Sbjct: 18 VLHSSKTSEHALQFFRWVERSNL---FEHNRETHLKIIEILGRASKLNHARCILLDMPKK 74
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G D+ +M+ Y K G ++ + + F++++ LG +SY ++ +R G
Sbjct: 75 GLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMA 134
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+ +M ++ + + ++ G+ ++G E A R FE ++ I+PD +IN
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMING 194
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
Y + ++A F M+ +EP+ ++ +Q++ AL + +++ GF +
Sbjct: 195 YYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK--GFGIK 252
Query: 380 KEA 382
A
Sbjct: 253 PNA 255
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 8/202 (3%)
Query: 163 EESFEANIRDYT---KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
E E I+ Y K+I G+ M + N +L+ G + T VM+ + +G
Sbjct: 108 ELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLS---EGIEPTRHTFNVMIWGFFLSG 164
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A FE++K D +Y +M+ Y R ++ E EM + + Y
Sbjct: 165 KVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYT 224
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L++GY + A R+ E ++ GI P+A + L+ A + +A + M
Sbjct: 225 TLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDK 284
Query: 340 GLEPSDKCV--ALILSACEKEN 359
L P+D + LI S C+ N
Sbjct: 285 YLAPTDNSIFMRLISSHCKSGN 306
>gi|255660864|gb|ACU25601.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 484
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 113/243 (46%), Gaps = 6/243 (2%)
Query: 141 VLKQLKLMEHPL-YLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR 199
VL K EH L + + E + L FE N + KII G+ ++ +A LL M ++
Sbjct: 18 VLHSSKTSEHALQFFRWVERSNL---FEHNRETHLKIIEILGRASKLNHARCILLDMPKK 74
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G D+ +M+ Y K G ++ + + F++++ LG +SY ++ +R G
Sbjct: 75 GLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMA 134
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+ +M ++ + + ++ G+ ++G E A R FE ++ I+PD +IN
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMING 194
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
Y + ++A F M+ +EP+ ++ +Q++ AL + +++ GF +
Sbjct: 195 YYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK--GFGIK 252
Query: 380 KEA 382
A
Sbjct: 253 PNA 255
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 92/210 (43%), Gaps = 7/210 (3%)
Query: 163 EESFEANIRDYT---KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
E E I+ Y K+I G+ M + N +L+ G + T VM+ + +G
Sbjct: 108 ELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLS---EGIEPTRHTFNVMIWGFFLSG 164
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A FE++K D +Y +M+ Y R ++ E EM + + Y
Sbjct: 165 KVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYT 224
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L++GY + A R+ E ++ GI P+A + L+ A + +A + M
Sbjct: 225 TLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDK 284
Query: 340 GLEPSDKCVAL-ILSACEKENQLNRALEFL 368
L P+D + L ++S+ K L+ A++ L
Sbjct: 285 YLAPTDNSIFLRLISSHCKSGNLDAAVDVL 314
>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
Length = 1003
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 103/244 (42%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
E N Y +IH K+ I++A M+ +G ++ Y K G+L A
Sbjct: 369 LEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRAR 428
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+ G SY ++ R G L L REM + + + + AL+ G+
Sbjct: 429 GLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGF 488
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
+ + A R+F+ + + + P+ ++I Y + G +KA+ + M + GL+P +
Sbjct: 489 CKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDN 548
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++S + +++A EF+ DLE ++ + L F R G E H+ E
Sbjct: 549 YTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDE 608
Query: 406 YGLR 409
+R
Sbjct: 609 MAVR 612
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/214 (19%), Positives = 92/214 (42%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E N +T +I+G+ K ++ A M I ++VT VM+ Y GN++
Sbjct: 471 ERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIR 530
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A + ++++ +G D +Y S++ + + + +++ + + ALL
Sbjct: 531 KAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALL 590
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G+ G +++ + G+ D +++ A +K+ F+ M++ G++
Sbjct: 591 YGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVK 650
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
P D ++ A KE + +AL + DG+
Sbjct: 651 PDDIFYTCMIDALSKEENMIQALNCWDQMVVDGY 684
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 101/246 (41%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
E +A+ Y +++G K M++Q A M G D+VT +V + + L+M
Sbjct: 227 EGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEM 286
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A ++ LG + + M+ + +++ L ++ + Y AL+
Sbjct: 287 ALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALID 346
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
N + A R+F+ + G+ P+ A+LI+A G + A F MR G++
Sbjct: 347 KLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKV 406
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+ +++ K+ L+RA L + ++G + L A R G + +
Sbjct: 407 TVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELH 466
Query: 404 REYGLR 409
RE R
Sbjct: 467 REMAER 472
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 5/205 (2%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I K+ + A N M G+ + VT TV++ K+G L AE +E+
Sbjct: 656 YTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEM- 714
Query: 233 LLGEPL-DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV-YKALLRGYSMNGN 290
L G L +K +Y + + G +++ + L M + ++ S V + L++G G
Sbjct: 715 LAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM--LQGHLASIVSFNILIKGLCKAGK 772
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
+ A + I +G +PD + +I+ G KA+ + M GL+P +
Sbjct: 773 IQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNI 832
Query: 351 ILSACEKENQLNRALEFLIDLERDG 375
+ C + ++AL ++ R G
Sbjct: 833 FIRWCNVHGESDKALGIYTNMIRSG 857
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 68/168 (40%)
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G +Q T + ++ K +A + F+++ G LD+ Y + + AY + LD
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
L+ M+++ V + Y L+ G N + A V + G+T D L+
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
+ + + A +M + G PS+ + ++ K+ + A
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSL 325
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 31/184 (16%), Positives = 77/184 (41%), Gaps = 1/184 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + + N +T +I+ K + +AE M + ++ T + ++ G+
Sbjct: 679 MVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGD 738
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ A++ + L G S+ ++ +AG + L+ ++ Y
Sbjct: 739 MEKAKDLHSAM-LQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYST 797
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G+ A ++ + + G+ PD + I + G+S KA + NM ++G
Sbjct: 798 IIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSG 857
Query: 341 LEPS 344
++P+
Sbjct: 858 VQPN 861
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 40/227 (17%), Positives = 89/227 (39%), Gaps = 35/227 (15%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMV-------------VMYSKAG 219
Y +++G+ + +++ A M R GF+ + + M+ + K G
Sbjct: 271 YRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLG 330
Query: 220 NLKM----------------------AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLD 257
+L M A+ F+E+ G ++ +Y ++ A + GM++
Sbjct: 331 DLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIE 390
Query: 258 RGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
L +M + + V Y +L+ GY G+ + A+ + + G+TP A + LI
Sbjct: 391 DALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLI 450
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
G + M + G+ ++ +++ K+ +++ A
Sbjct: 451 AGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEA 497
>gi|255660876|gb|ACU25607.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 484
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 99/211 (46%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
FE N + KII G+ ++ +A LL M ++G D+ +M+ Y K G ++ +
Sbjct: 41 FEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESV 100
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+ F++++ LG +SY ++ +R G + +M ++ + + ++ G+
Sbjct: 101 KMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGF 160
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
++G E A R FE ++ I+PD +IN Y + ++A F M+ +EP+
Sbjct: 161 FLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTV 220
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGF 376
++ +Q++ AL + +++ G
Sbjct: 221 VTYTTLIKGYVSVDQVDDALRLVEEMKGSGI 251
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 8/202 (3%)
Query: 163 EESFEANIRDYT---KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
E E I+ Y K+I G+ M + N +L+ G + T VM+ + +G
Sbjct: 108 ELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLS---EGIEPTRHTFNVMIWGFFLSG 164
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A FE++K D +Y +M+ Y R ++ E EM + + Y
Sbjct: 165 KVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYT 224
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L++GY + A R+ E ++ +GI P+A + L+ A + +A + M
Sbjct: 225 TLIKGYVSVDQVDDALRLVEEMKGSGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDK 284
Query: 340 GLEPSDKCV--ALILSACEKEN 359
L P+D + LI S C+ N
Sbjct: 285 YLAPTDNSIFMRLISSHCKSGN 306
>gi|115445137|ref|NP_001046348.1| Os02g0226900 [Oryza sativa Japonica Group]
gi|49388538|dbj|BAD25660.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|49388672|dbj|BAD25856.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535879|dbj|BAF08262.1| Os02g0226900 [Oryza sativa Japonica Group]
Length = 637
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 112/265 (42%), Gaps = 2/265 (0%)
Query: 97 RKMTKRCKAFVKQIICVSPETGNLSDLLA-AWVRFMKPRRADWLAVLKQLKLMEHPLYLQ 155
R M + +++ + +C S ++ W K R ++++L+ L E L
Sbjct: 354 RFMNRSIYSYLVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAI 413
Query: 156 VAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
+ E+ ++ Y + GK Q+ N MK G I D T +M+ Y
Sbjct: 414 DLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSY 473
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
+ G + A E FE ++ D +Y S++ + G LD +L +EM +
Sbjct: 474 GRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDV 533
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
Y L+ + + E A +F+ + G TP+ +L++ + G++++A+ ++
Sbjct: 534 FTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGKTEEAHKLYET 593
Query: 336 MRKAGLEPSDKCVALILSACEKENQ 360
M++ GL P D IL E +Q
Sbjct: 594 MKQQGLIP-DSITYSILERLESRSQ 617
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 83/196 (42%), Gaps = 6/196 (3%)
Query: 188 NAENTLLA------MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKR 241
NAE TL A M +G + D ++ K + F+++K G D
Sbjct: 405 NAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVF 464
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI 301
+Y M+ +Y R G++D+ L M+A Y +L+ +G+ + A +F+ +
Sbjct: 465 TYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEM 524
Query: 302 QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQL 361
Q G PD ++LI + + + + A + F M G P+ ++L E+ +
Sbjct: 525 QEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGKT 584
Query: 362 NRALEFLIDLERDGFM 377
A + +++ G +
Sbjct: 585 EEAHKLYETMKQQGLI 600
>gi|299473702|emb|CBN78095.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 537
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 106/253 (41%), Gaps = 12/253 (4%)
Query: 158 ELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSK 217
EL +EE+ A D K+ G++ Q ++A L+ + RG + + SK
Sbjct: 87 ELDPVEEAQRACAADLKKL----GQRGQWEDATRALVGARVRGVPVNVYMYNSAISAVSK 142
Query: 218 AGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM-DAQEVYVGSE 276
AG K A ++++ G D+ +Y S+++A R G + LL EM +
Sbjct: 143 AGRWKEAMSMMKQMEKDGIAFDEFTYSSVIVACGRGGQPRKALELLDEMVQVHGIAPDMI 202
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
Y A ++ G +E A + E + G+ PD I A GQ +KA M
Sbjct: 203 CYGAAIQACGDAGLTEEALSLMEKMSREGLLPDKTAYNSAIIACGEKGQWEKALNLLGEM 262
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG-------FMVGKEASCTLAAW 389
R GL P + AC + RAL+ L ++E DG F +A A W
Sbjct: 263 RSKGLRPDQNSYRFAMQACSTGGRWERALQLLHEMEEDGSTPDVAAFQTALDALKDAAQW 322
Query: 390 FKRLGVVEEVEHV 402
K + ++ E++ +
Sbjct: 323 EKAMDLISEMDEL 335
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 1/176 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAM-KRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEI 231
Y+ +I G+ Q + A L M + G D + + AG + A E++
Sbjct: 168 YSSVIVACGRGGQPRKALELLDEMVQVHGIAPDMICYGAAIQACGDAGLTEEALSLMEKM 227
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
G DK +Y S ++A G ++ LL EM ++ + Y+ ++ S G
Sbjct: 228 SREGLLPDKTAYNSAIIACGEKGQWEKALNLLGEMRSKGLRPDQNSYRFAMQACSTGGRW 287
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
E A ++ ++ G TPD ++A + A Q +KA M + G+ PS+ C
Sbjct: 288 ERALQLLHEMEEDGSTPDVAAFQTALDALKDAAQWEKAMDLISEMDELGVPPSEGC 343
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 81/199 (40%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y I G+K Q + A N L M+ +G DQ + + S G + A + E++
Sbjct: 239 YNSAIIACGEKGQWEKALNLLGEMRSKGLRPDQNSYRFAMQACSTGGRWERALQLLHEME 298
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D ++ + + A A ++ L+ EMD V + A + + G
Sbjct: 299 EDGSTPDVAAFQTALDALKDAAQWEKAMDLISEMDELGVPPSEGCFAAAIAACAEVGEWL 358
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + + G+ P+ +I A + + A T +++K+G + +++
Sbjct: 359 PASTARKLMGYYGLQPELETYKSIIKACLVGKEFNMALTTLFDLQKSGRRADQETWDMLI 418
Query: 353 SACEKENQLNRALEFLIDL 371
C + + ALE + D+
Sbjct: 419 EICAVVGKWDAALEIIRDI 437
>gi|357122825|ref|XP_003563115.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Brachypodium distachyon]
Length = 410
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 94/222 (42%), Gaps = 6/222 (2%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKL 233
T ++HGY + + A+ M R G ++VT T ++ Y G + FE++++
Sbjct: 42 TALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRREKGLALFEKMRI 101
Query: 234 LGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEG 293
G + +Y +V + R G +R +L EM A+ + Y L+ G +
Sbjct: 102 GGIEPNLYTYNILVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKD 161
Query: 294 AQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV-ALIL 352
A ++ E ++ GI P LL++ Y AG+ A MR AG +PS ALI
Sbjct: 162 ATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIA 221
Query: 353 SACEKENQL--NRALEFLIDLERDGFMVGKEASCTLAAWFKR 392
C + + NRA D++ G K L F R
Sbjct: 222 GFCRARDMIRANRAFS---DMKERGLAPTKVTYTILIDAFAR 260
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 128/284 (45%), Gaps = 21/284 (7%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKL--MEHPLY---LQVAELA------- 160
++P + L+ + F+ RR LA+ +++++ +E LY + V E
Sbjct: 69 LTPNEVTFTALIHGY--FIHGRREKGLALFEKMRIGGIEPNLYTYNILVGEWCRTGEFER 126
Query: 161 ---LLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVV 213
L EE N+ Y +I G + ++++A L M+R G VT ++V
Sbjct: 127 ARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQLLELMRREGIRPSVVTFNLLVD 186
Query: 214 MYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYV 273
Y KAG + A ++++ G +Y +++ + RA + R +M + +
Sbjct: 187 GYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIAGFCRARDMIRANRAFSDMKERGLAP 246
Query: 274 GSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAF 333
Y L+ ++ + + A +F ++ AG+ D R +L++A M G + A F
Sbjct: 247 TKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGVLVHALCMEGNMKDARKLF 306
Query: 334 QNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
Q++ + GL+ + +++ +E +A++ ++++ + GF+
Sbjct: 307 QSIGEKGLQVGNVIYDMLIYGYGREGSSYKAMKLIMEMRKKGFV 350
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 87/182 (47%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G+ + + A MK RG +VT T+++ +++ ++ A E F ++
Sbjct: 216 YNALIAGFCRARDMIRANRAFSDMKERGLAPTKVTYTILIDAFARENDMDKAFEMFAGME 275
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G +D R+YG +V A G + L + + + + VG+ +Y L+ GY G+S
Sbjct: 276 KAGLEVDVRTYGVLVHALCMEGNMKDARKLFQSIGEKGLQVGNVIYDMLIYGYGREGSSY 335
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A ++ ++ G P++ L I G+ +A +M +AG++ S+ ++L
Sbjct: 336 KAMKLIMEMRKKGFVPNSASYGLTIRILCNDGKCSEAEALIDDMVRAGVQTSESVRQVLL 395
Query: 353 SA 354
+A
Sbjct: 396 NA 397
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%)
Query: 261 VLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAY 320
+L R A + + AL+ GY +G+ AQRVF+ + G+TP+ LI+ Y
Sbjct: 24 LLARGAKAGDTTLDVAACTALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVTFTALIHGY 83
Query: 321 QMAGQSQKAYTAFQNMRKAGLEPS 344
+ G+ +K F+ MR G+EP+
Sbjct: 84 FIHGRREKGLALFEKMRIGGIEPN 107
>gi|255661198|gb|ACU25768.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 426
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 98/218 (44%), Gaps = 4/218 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 213 KDIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDR 272
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A FE+++ G +D+ Y +M++AY RAG++ + LL E+ + L R
Sbjct: 273 AAILFEKLRSSGIEIDQVLYQTMIVAYERAGLVSHAKRLLHELKTPDNIPRDTAIHILAR 332
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G E A VF AG D + +I+ + + F MR
Sbjct: 333 A----GRIEEATWVFRQAIDAGEVKDITVFERMIDLFSKYKKYSNIVEVFDKMRGLEYFS 388
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKE 381
+AL+L+A K ++ +A + +++ +G + E
Sbjct: 389 DSYVIALVLNAYGKLHEFEKANDVYTEMQDEGCVFSDE 426
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 107/254 (42%), Gaps = 9/254 (3%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+ +GK + A + + M+ G + D V+ T ++ MY + A F E++
Sbjct: 82 YNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSYTALLTMYVENKKFLEALSVFAEMR 141
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ LD + M+ Y + GM + L M + Y LLR Y G++E
Sbjct: 142 EIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGIEPNVVSYNTLLRVY---GDAE 198
Query: 293 ---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
A +F +Q I + ++ Y + +KA Q M+ G+EP+ +
Sbjct: 199 LFGEAIHLFRLMQRKDIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNAITYS 258
Query: 350 LILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLR 409
I+S K +L+RA L G + + T+ ++R G+V + +L E
Sbjct: 259 TIISIWGKVGKLDRAAILFEKLRSSGIEIDQVLYQTMIVAYERAGLVSHAKRLLHEL--- 315
Query: 410 ETYSKIPGSRSIAL 423
+T IP +I +
Sbjct: 316 KTPDNIPRDTAIHI 329
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 102/233 (43%), Gaps = 4/233 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT ++ Y + + A + M+ + D T +M+ +Y + G K A++ F ++
Sbjct: 117 YTALLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMR 176
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
LG + SY +++ Y A + L R M +++ Y +++ Y E
Sbjct: 177 KLGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNSMMMIYGKTLEHE 236
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + +Q GI P+A + +I+ + G+ +A F+ +R +G+E ++
Sbjct: 237 KANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAILFEKLRSSGIEIDQVLYQTMI 296
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
A E+ ++ A L +L+ + A LA R G +EE V R+
Sbjct: 297 VAYERAGLVSHAKRLLHELKTPDNIPRDTAIHILA----RAGRIEEATWVFRQ 345
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 76/172 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ +A + L M++ D V + ++ + K + A F +K
Sbjct: 12 YSTLITYFGKEGLFDDALSWLQKMEQDRVRGDLVLYSNLIELSRKLCDYSKAISIFSRLK 71
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D Y SM+ + +A + L+ EM V + Y ALL Y N
Sbjct: 72 RSGIMPDLVVYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSYTALLTMYVENKKFL 131
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF ++ D C ++I+ Y G +++A F +MRK G+EP+
Sbjct: 132 EALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGIEPN 183
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 77/174 (44%), Gaps = 4/174 (2%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E N+ Y ++ YG A + M+R+ + VT M+++Y K + A
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNSMMMIYGKTLEHEKANN 240
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
+E++ G + +Y +++ + + G LDR +L ++ + + + +Y+ ++ Y
Sbjct: 241 LIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAILFEKLRSSGIEIDQVLYQTMIVAYE 300
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
G A+R+ ++ TPD I+ AG+ ++A F+ AG
Sbjct: 301 RAGLVSHAKRLLHELK----TPDNIPRDTAIHILARAGRIEEATWVFRQAIDAG 350
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 30/165 (18%), Positives = 70/165 (42%)
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
D+ +Y +++ + + G+ D L++M+ V +Y L+ + A +F
Sbjct: 8 DRYTYSTLITYFGKEGLFDDALSWLQKMEQDRVRGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
++ +GI PD + +IN + A ++A + MR AG+ P +L+ +
Sbjct: 68 SRLKRSGIMPDLVVYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSYTALLTMYVEN 127
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+ AL ++ ++ + + +LG+ +E + +
Sbjct: 128 KKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 172
>gi|255660912|gb|ACU25625.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 481
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 111/243 (45%), Gaps = 6/243 (2%)
Query: 141 VLKQLKLMEHPL-YLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR 199
VL K EH L + + E + L FE N + KII G+ ++ +A LL M ++
Sbjct: 18 VLHSAKTSEHALQFFRWVERSNL---FEHNRETHLKIIEILGRASKLNHARCILLDMPKK 74
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G D+ +M+ Y K G ++ + + F+ ++ LG +SY ++ +R G
Sbjct: 75 GLEWDEDMWVMMIDSYGKQGIVQESVKLFDRMEELGVERTIKSYDALFKVILRRGRYMMA 134
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+ +M ++ + + L+ G+ ++G E A R FE ++ I+PD +IN
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVLIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMING 194
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
Y + +A F M+ +EP+ ++ +Q++ AL + +++ GF +
Sbjct: 195 YYRVKKMXEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK--GFGIK 252
Query: 380 KEA 382
A
Sbjct: 253 PNA 255
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 90/211 (42%), Gaps = 9/211 (4%)
Query: 163 EESFEANIRDYT---KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
E E I+ Y K+I G+ M + N +L+ G + T V++ + +G
Sbjct: 108 ELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLS---EGIEPTRHTFNVLIWGFFLSG 164
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A FE++K D +Y +M+ Y R + E EM + + Y
Sbjct: 165 KVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMXEAEKYFVEMKGRNIEPTVVTYT 224
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L++GY + A R+ E ++ GI P+A + L+ A + +A + + M
Sbjct: 225 TLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARSILKEMMDK 284
Query: 340 GLEPSDKCV--ALILSACEKENQLNRALEFL 368
L P+D + LI S C K L+ A + L
Sbjct: 285 YLAPTDNSIFMRLITSQC-KSGHLDAASDVL 314
>gi|5738362|emb|CAB52870.1| putative protein [Arabidopsis thaliana]
gi|7268785|emb|CAB78991.1| putative protein [Arabidopsis thaliana]
Length = 1302
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 114/264 (43%), Gaps = 11/264 (4%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ F+ N+ ++T +I G KK I+ A L M R G+ + T T ++ K G
Sbjct: 879 MIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGW 938
Query: 221 LKMAEETFEEIKLLGEPLDK---RSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
+ A F +KL+ K +Y SM+ Y + L+R E+L M Q ++
Sbjct: 939 TEKAFRLF--LKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNT 996
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y L+ G+ G+ A + + G P+ I++ ++ +AY
Sbjct: 997 YTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAF 1056
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
GLE +++ K+N +N+AL F + + GF + L A F R ++
Sbjct: 1057 SCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMK 1116
Query: 398 EVEHVLR---EYGL---RETYSKI 415
E E + + GL +ETY+ +
Sbjct: 1117 ESERLFQLVVSLGLIPTKETYTSM 1140
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 78/201 (38%), Gaps = 1/201 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+E F NI Y I KK + A L G D VT T+++ K ++
Sbjct: 1022 DEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDIN 1081
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A F + G D R ++ A+ R + E L + + + + E Y +++
Sbjct: 1082 QALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMI 1141
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
Y G+ + A + F ++ G PD+ LI+ +A ++ M GL
Sbjct: 1142 SCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLS 1201
Query: 343 PSDKC-VALILSACEKENQLN 362
P + V L C++ + N
Sbjct: 1202 PPEVTRVTLAYEYCKRNDSAN 1222
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 4/152 (2%)
Query: 161 LLEESF----EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS 216
LL ++F EA+ YT +I K+ I A M + GF D +++ +
Sbjct: 1051 LLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFC 1110
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
+ +K +E F+ + LG K +Y SM+ Y + G +D M S
Sbjct: 1111 RQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSF 1170
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITP 308
Y +L+ G + A +++EA+ G++P
Sbjct: 1171 TYGSLISGLCKKSMVDEACKLYEAMIDRGLSP 1202
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 75/178 (42%), Gaps = 20/178 (11%)
Query: 219 GNLKMAEE-------TFEEIKLLGEP----LDKRSYG----SMVMA-----YVRAGMLDR 258
GNL+ A E F EI L E +D ++ G S+ M V G+++
Sbjct: 742 GNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEY 801
Query: 259 GEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLIN 318
E + EM + V S YK ++ G +G + A R + G PD C L++
Sbjct: 802 AENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILT 861
Query: 319 AYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
A G +A F+ M G +P+ ++ K+ + +A E L ++ R+G+
Sbjct: 862 ALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGW 919
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 36/202 (17%), Positives = 74/202 (36%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E+ N+ YT +I+G+ K A + M GF+ + T + K
Sbjct: 987 EQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAP 1046
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A E + G D +Y ++ + +++ M+ + L+
Sbjct: 1047 EAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILI 1106
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
+ + ++R+F+ + G+ P +I+ Y G A F NM++ G
Sbjct: 1107 AAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCV 1166
Query: 343 PSDKCVALILSACEKENQLNRA 364
P ++S K++ ++ A
Sbjct: 1167 PDSFTYGSLISGLCKKSMVDEA 1188
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 76/180 (42%), Gaps = 1/180 (0%)
Query: 186 IQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGS 245
I+ AEN M RG + D + +MV+ + G ++ A+ + G D +
Sbjct: 799 IEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTL 858
Query: 246 MVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAG 305
++ A G+++R R+M + +L+ G G+ + A + E + G
Sbjct: 859 ILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNG 918
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNM-RKAGLEPSDKCVALILSACEKENQLNRA 364
P+ LI+ G ++KA+ F + R +P+ ++ KE++LNRA
Sbjct: 919 WKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRA 978
>gi|356573733|ref|XP_003555011.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
mitochondrial-like [Glycine max]
Length = 752
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 106/245 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + + Y +I + K A +M++ G D T +M+ +K+G
Sbjct: 185 ILNAGCKVDTETYNSLITLFLNKGLPYKAFEMYESMEKAGCSLDGSTYELMIPNLAKSGR 244
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A + F+E+K+ G + S+V + +AG LD + EM +Y +
Sbjct: 245 LDAAFKLFQEMKVRGFRPGLNVFASLVDSMGKAGRLDSAMKVYMEMRGYGYKPPPTIYVS 304
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ Y +G E A R+++ ++ AG P+ + L+I ++ +G+ + A + F +M KAG
Sbjct: 305 LIESYVKSGKLETALRLWDEMRMAGFRPNFGLYTLIIESHAKSGKLEIAMSTFLDMEKAG 364
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
P+ A +L Q++ A++ + G G L +V+
Sbjct: 365 FLPTPSTYACLLEMHAASGQIDPAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAA 424
Query: 401 HVLRE 405
+L E
Sbjct: 425 KILLE 429
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 93/219 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I K ++ A MK RGF +V KAG L A + + E++
Sbjct: 232 YELMIPNLAKSGRLDAAFKLFQEMKVRGFRPGLNVFASLVDSMGKAGRLDSAMKVYMEMR 291
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G Y S++ +YV++G L+ L EM +Y ++ ++ +G E
Sbjct: 292 GYGYKPPPTIYVSLIESYVKSGKLETALRLWDEMRMAGFRPNFGLYTLIIESHAKSGKLE 351
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A F ++ AG P A L+ + +GQ A + +M AGL P ++L
Sbjct: 352 IAMSTFLDMEKAGFLPTPSTYACLLEMHAASGQIDPAMKLYNSMTNAGLRPGLSTYTVLL 411
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFK 391
+ + ++ A + L++++ G+ V AS L + K
Sbjct: 412 TLLANKKLVDVAAKILLEMKAMGYSVDVTASDILMVYIK 450
>gi|225446845|ref|XP_002279656.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
mitochondrial-like [Vitis vinifera]
Length = 844
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 97/214 (45%), Gaps = 1/214 (0%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKL 233
+++ K +++ A ++ G D T ++ ++ G A E +E ++
Sbjct: 253 NQVVRDLAKAEKLEVAFCCFKKVQDSGCKIDTATYNSLITLFLNKGLPYKAFEVYESMEA 312
Query: 234 LGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEG 293
G LD +Y M+ + ++G LD L +EM + + V+ +L+ G +
Sbjct: 313 AGCLLDGSTYELMIPSLAKSGRLDAAFKLFQEMKEKNLRPSFLVFASLVDSMGKAGRLDT 372
Query: 294 AQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILS 353
+ +V+ +Q G+ P A M LI ++ AG+ + A + M+KAG P+ +++
Sbjct: 373 SMKVYMEMQGFGLRPSATMYVSLIESFVKAGKLETALRIWDEMKKAGFRPNYGLYTMVVE 432
Query: 354 ACEKENQLNRALEFLIDLERDGFM-VGKEASCTL 386
+ K +L A+ D+E+ GF+ SC L
Sbjct: 433 SHAKSGKLETAMSVFSDMEKAGFLPTPSTYSCLL 466
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 92/219 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I K ++ A MK + + +V KAG L + + + E++
Sbjct: 322 YELMIPSLAKSGRLDAAFKLFQEMKEKNLRPSFLVFASLVDSMGKAGRLDTSMKVYMEMQ 381
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G Y S++ ++V+AG L+ + EM +Y ++ ++ +G E
Sbjct: 382 GFGLRPSATMYVSLIESFVKAGKLETALRIWDEMKKAGFRPNYGLYTMVVESHAKSGKLE 441
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A VF ++ AG P + L+ + +GQ A + +M AGL P +L
Sbjct: 442 TAMSVFSDMEKAGFLPTPSTYSCLLEMHSASGQVDSAMKLYNSMTNAGLRPGLSTYTALL 501
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFK 391
+ + ++ A + L++++ GF V AS L + K
Sbjct: 502 TLLANKKLVDVAAKVLLEMKAMGFSVDVSASDVLMVYIK 540
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 65/143 (45%), Gaps = 3/143 (2%)
Query: 273 VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTA 332
+ + Y +L+ + G A V+E+++ AG D L+I + +G+ A+
Sbjct: 282 IDTATYNSLITLFLNKGLPYKAFEVYESMEAAGCLLDGSTYELMIPSLAKSGRLDAAFKL 341
Query: 333 FQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKR 392
FQ M++ L PS A ++ + K +L+ +++ ++++ G +L F +
Sbjct: 342 FQEMKEKNLRPSFLVFASLVDSMGKAGRLDTSMKVYMEMQGFGLRPSATMYVSLIESFVK 401
Query: 393 LGVVEEVEHV---LREYGLRETY 412
G +E + +++ G R Y
Sbjct: 402 AGKLETALRIWDEMKKAGFRPNY 424
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 88/185 (47%), Gaps = 1/185 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G K +++ + M+ RG + ++ T + ++ Y K G+L+ AE+ + +
Sbjct: 400 YNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRML 459
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + Y ++ +Y ++ +++ + M Q V + + +Y L+ S +GN E
Sbjct: 460 DTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNME 519
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV-ALI 351
A RV I+ G PD + + LI+ +KA+ M K G++P+ C ALI
Sbjct: 520 AAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALI 579
Query: 352 LSACE 356
C+
Sbjct: 580 DGLCK 584
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 90/210 (42%), Gaps = 1/210 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L+ + N Y ++ Y K I+ +T +M +G + D +++ S +GN
Sbjct: 458 MLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGN 517
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ A EI+ G D Y S++ + ++ +L EM + V Y A
Sbjct: 518 MEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNA 577
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G +G+ A+ VF +I G+ P+ LI+ G A+ + M G
Sbjct: 578 LIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATG 637
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLID 370
+ P +++ + C L +A+ FLI+
Sbjct: 638 ITPDAFVYSVLTTGCSSAGDLEQAM-FLIE 666
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/207 (19%), Positives = 94/207 (45%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y+ +IHG + + + A + L M +G + ++ Y + GN+ +A E F
Sbjct: 326 NVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIF 385
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+++ + D Y S++ + G ++ +M + + Y L+ GY N
Sbjct: 386 DKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKN 445
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G+ E A+++ + + G+ P+ + L+ +Y + +K + F++M G+ ++
Sbjct: 446 GDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIY 505
Query: 349 ALILSACEKENQLNRALEFLIDLERDG 375
+++ + A L ++E++G
Sbjct: 506 GILIHNLSSSGNMEAAFRVLSEIEKNG 532
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 102/226 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+G K + A+ L M + V ++ + + GN A + +E+
Sbjct: 190 YGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMV 249
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G +K +Y ++V + G +DR +LL++M + Y ++ G+ + N +
Sbjct: 250 AAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKK 309
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A R+ ++ AGI+P+ +++I+ +G+ +KA + M GL+P+ A ++
Sbjct: 310 DAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLI 369
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
S +E ++ A E + + + +L ++G VEE
Sbjct: 370 SGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEE 415
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 92/208 (44%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y+ +I Y K + A+ L+ M+ RG + VT V++ ++G ++ A
Sbjct: 116 DVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFK 175
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++++ G D +YG+++ ++ + + LL EM E+ VY L+ G+
Sbjct: 176 KDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMRE 235
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
GN++ A ++ + + AG+ P+ L+ GQ +A + M + P
Sbjct: 236 GNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITY 295
Query: 349 ALILSACEKENQLNRALEFLIDLERDGF 376
LI+ + + A L ++E G
Sbjct: 296 NLIIEGHFRHHNKKDAFRLLSEMENAGI 323
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 97/245 (39%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ +S + Y II G+ + ++A L M+ G + T ++M+ ++G
Sbjct: 283 MVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGE 342
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + EE+ G + Y ++ Y R G + + +M V Y +
Sbjct: 343 PEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNS 402
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G S G E + + F +Q G+ P+ + LI+ Y G + A Q M G
Sbjct: 403 LIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTG 462
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
L+P+D +L + K + + + + G M+ L G +E
Sbjct: 463 LKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAF 522
Query: 401 HVLRE 405
VL E
Sbjct: 523 RVLSE 527
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 81/192 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ G K Q+ A L M R D +T +++ + + N K A E++
Sbjct: 260 YDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEME 319
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +Y M+ ++G ++ LL EM + + + VY L+ GY GN
Sbjct: 320 NAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVS 379
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +F+ + + PD LI G+ +++ F M++ GL P++ + ++
Sbjct: 380 LACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLI 439
Query: 353 SACEKENQLNRA 364
K L A
Sbjct: 440 HGYLKNGDLESA 451
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 95/230 (41%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
++ Y K ++Q+A +L M+ RG ++ +A + + + E + G
Sbjct: 53 LVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGAG 112
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
D +Y +++ AY + D + +L EM + + + Y L+ G +G E A
Sbjct: 113 ISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAF 172
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
+ ++ G+ PD LIN + +S +A M A L+P+ A ++
Sbjct: 173 GFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGF 232
Query: 356 EKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+E + A + + ++ G K L ++G ++ +L++
Sbjct: 233 MREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQ 282
Score = 38.1 bits (87), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 96/252 (38%), Gaps = 30/252 (11%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
++L + N YT +I G K I NA M G D +V+ S AG
Sbjct: 597 SILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAG 656
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+L+ A EE+ L G S+ ++V + + G + LL + + + + +
Sbjct: 657 DLEQAMFLIEEMFLRGHA-SISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIE 715
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
++ G S G +F +Q AR + L F +M
Sbjct: 716 NIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSL----------------FMDMINQ 759
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFK------RL 393
G P D +I C KE L++AL + RD +V K A +++ R
Sbjct: 760 GKIPLDVVDDMIRDHC-KEGNLDKAL-----MLRD-VIVAKSAPMGCSSYLAIVDNLCRK 812
Query: 394 GVVEEVEHVLRE 405
G + E ++L+E
Sbjct: 813 GKLSEALNLLKE 824
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 106/247 (42%), Gaps = 11/247 (4%)
Query: 155 QVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
Q+ E + + F ++ Y +I G+ K +++ M +RG + + VT +++
Sbjct: 177 QMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 235
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
+AG+ MA+E F+E+ G P + +Y +++ + G L++ V+ + ++
Sbjct: 236 LFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 295
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
Y ++ G G E +F + G+ PD +I+ + G ++A F+
Sbjct: 296 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFK 355
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
M++ G P+ C N L RA D E ++ + SC A +G
Sbjct: 356 EMKEDGTLPNSGCY----------NTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG 405
Query: 395 VVEEVEH 401
+V + H
Sbjct: 406 LVTNMLH 412
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 6/206 (2%)
Query: 140 AVLKQLKLME-HPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKR 198
A +K+ KL+E LY + +++ S + +I Y+ +I+G+ ++ A+ M
Sbjct: 130 AFVKEGKLVEAEKLYDE-----MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS 184
Query: 199 RGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDR 258
+ D VT ++ + K ++ E F E+ G + +Y ++ +AG D
Sbjct: 185 KHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDM 244
Query: 259 GEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLIN 318
+ + +EM + V Y LL G NG E A VFE +Q + + P ++I
Sbjct: 245 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 304
Query: 319 AYQMAGQSQKAYTAFQNMRKAGLEPS 344
AG+ + + F N+ G++P
Sbjct: 305 GMCKAGKVEDGWDLFCNLSLKGVKPD 330
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 85/210 (40%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
E + Y II G K + +A N M+ +G + VT + ++ G A
Sbjct: 47 LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS 106
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
++ D ++ +++ A+V+ G L E L EM + + Y +L+ G+
Sbjct: 107 RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 166
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
M+ + A+++FE + PD LI + + ++ F+ M + GL +
Sbjct: 167 CMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 226
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDG 375
+++ + + A E ++ DG
Sbjct: 227 VTYNILIQGLFQAGDCDMAQEIFKEMVSDG 256
>gi|410110121|gb|AFV61140.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
lupulina]
Length = 257
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 101/212 (47%), Gaps = 4/212 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 49 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDR 108
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ + +M++AY RAG++ + LL E+ + + + +L
Sbjct: 109 AAMLFQKLRSTGVEIDQILFQTMIVAYERAGLIAHAKRLLHELKRPD-NIPRDTAIHILA 167
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + F MR G P
Sbjct: 168 G---AGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYANVVEVFDKMRGLGYFP 224
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDG 375
+A++L+A K + ++A + ++++ G
Sbjct: 225 DSNVIAVVLNAYGKLQEFDKANDVYMEMQEVG 256
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 79/184 (42%), Gaps = 4/184 (2%)
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
K A++ F ++ +G + SY +++ Y A + L R M + + Y ++
Sbjct: 2 KEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSM 61
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+ Y E A + + +Q GI P++ + +I+ + G+ +A FQ +R G+
Sbjct: 62 MMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSTGV 121
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEH 401
E ++ A E+ + A L +L+R + A LA G +EE +
Sbjct: 122 EIDQILFQTMIVAYERAGLIAHAKRLLHELKRPDNIPRDTAIHILAG----AGRIEEATY 177
Query: 402 VLRE 405
V R+
Sbjct: 178 VFRQ 181
>gi|255661184|gb|ACU25761.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 426
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 103/218 (47%), Gaps = 4/218 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 213 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDR 272
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ + +M++AY RAG++ + LL E+ + + + +L
Sbjct: 273 AAMLFQKLRSSGIEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDTAIHILA 331
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + F MR G P
Sbjct: 332 G---AGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFP 388
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKE 381
+A++L+A K + ++A + ++++ G + E
Sbjct: 389 DSDVIAIVLNAYGKLQEFDKANDVYMEMQEVGCVFSDE 426
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 102/237 (43%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 113 NTXSYSTLLTMYVENKKFLEALSVFSEMREJKCLLDLTTCNIMIDVYGQLGMAKEADKLF 172
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 173 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 232
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G+E
Sbjct: 233 LEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQILF 292
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE +V R+
Sbjct: 293 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAG----AGRIEEATYVFRQ 345
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 102/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + MK G + + + + ++ MY + A
Sbjct: 75 FTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTXSYSTLLTMYVENKKFLEAL 134
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ J LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 135 SVFSEMREJKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 194
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + ++ Y + +KA Q M+ G+E
Sbjct: 195 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIE 251
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 252 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQILFQTMIVAYERAGLVAHAKRL 311
Query: 403 LRE 405
L E
Sbjct: 312 LHE 314
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 75/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ A + L M++ D V + ++ + K + A F +K
Sbjct: 12 YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 71
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +M+ + +A + L+ EM A V + Y LL Y N
Sbjct: 72 RSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTXSYSTLLTMYVENKKFL 131
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF ++ D C ++I+ Y G +++A F MRK G+EP+
Sbjct: 132 EALSVFSEMREJKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Score = 38.1 bits (87), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 31/172 (18%), Positives = 76/172 (44%), Gaps = 2/172 (1%)
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
D+ +Y +++ + + G+ D L++M+ V +Y L+ + A +F
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
++ +G TPD +IN + A ++A + M+ AG+ P+ + +L+ +
Sbjct: 68 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTXSYSTLLTMYVEN 127
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRE 410
+ AL ++ ++ + + +LG+ +E + + +G+R+
Sbjct: 128 KKFLEALSVFSEMREJKCLLDLTTCNIMIDVYGQLGMAKEADKLF--WGMRK 177
>gi|255547341|ref|XP_002514728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546332|gb|EEF47834.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 94/212 (44%), Gaps = 6/212 (2%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+L++ + N+ + +I K ++ A + M + G + + V ++ YSKAG
Sbjct: 281 GMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVVFNSLIDGYSKAG 340
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
N A + E++ D +Y ++ R G ++ + +L+ M+ + V S VY
Sbjct: 341 NCSEATDLLLEMEKFKISPDVFTYSILIKNACRLGTVEEADDILKRMEKEGVPANSVVYN 400
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQF------AGITPDARMCALLINAYQMAGQSQKAYTAF 333
+L+ GY GN E A +F+A +F G+ PDA A+++ + A
Sbjct: 401 SLIDGYCKEGNMEKALEIFKATKFFSDMRRNGLRPDALAYAVMLQGHLNAKHMADVMMLH 460
Query: 334 QNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
+M K G+ P++ ++ + L AL
Sbjct: 461 ADMIKMGIVPNEVTSQVVRRGYQDNGYLKSAL 492
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 102/225 (45%), Gaps = 12/225 (5%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++++ E + YT +IHG + ++ AE+ MK G + T V++ Y K N
Sbjct: 212 MVKKGIEPTVVIYTTLIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTAN 271
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+K A ++ + G + ++G ++ A + L +M V V+ +
Sbjct: 272 VKQALHLYQGMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVVFNS 331
Query: 281 LLRGYSMNGN-SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ GYS GN SE + E +F I+PD ++LI G ++A + M K
Sbjct: 332 LIDGYSKAGNCSEATDLLLEMEKFK-ISPDVFTYSILIKNACRLGTVEEADDILKRMEKE 390
Query: 340 GLEPSDKCV--ALILSACEKENQLNRALE------FLIDLERDGF 376
G+ P++ V +LI C KE + +ALE F D+ R+G
Sbjct: 391 GV-PANSVVYNSLIDGYC-KEGNMEKALEIFKATKFFSDMRRNGL 433
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 80/190 (42%), Gaps = 6/190 (3%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y ++ GY K ++ A + M G + VT +++ K L A F
Sbjct: 255 NLYTYNVLMDGYCKTANVKQALHLYQGMLDDGLQPNVVTFGILIDALCKVRELLAARRFF 314
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ G + + S++ Y +AG LL EM+ ++ Y L++
Sbjct: 315 VQMAKFGVVPNVVVFNSLIDGYSKAGNCSEATDLLLEMEKFKISPDVFTYSILIKNACRL 374
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ------NMRKAGLE 342
G E A + + ++ G+ ++ + LI+ Y G +KA F+ +MR+ GL
Sbjct: 375 GTVEEADDILKRMEKEGVPANSVVYNSLIDGYCKEGNMEKALEIFKATKFFSDMRRNGLR 434
Query: 343 PSDKCVALIL 352
P A++L
Sbjct: 435 PDALAYAVML 444
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 123/306 (40%), Gaps = 30/306 (9%)
Query: 122 DLLAAWVRFMKPRRADWLA--VLKQLKLME-HP-----LYLQVAELALLEESFEANIRDY 173
DL+ ++ PRR + L L QL+ + +P L + +E+ L++E+ +R Y
Sbjct: 87 DLIQTLLQSCTPRRVNSLVFNALSQLRGSKFNPSVFGVLIIAFSEVGLVDEA----LRVY 142
Query: 174 TKI------------IHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL 221
K+ ++G KK M R VT V+V + G++
Sbjct: 143 LKVGAFPAVQACNALLNGLLKKSSFDIMWELYNNMVSRRLFPTVVTYNVLVDACCRQGDV 202
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
A+ E+ G Y +++ L E + R+M V+ Y L
Sbjct: 203 LRAKSLISEMVKKGIEPTVVIYTTLIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVL 262
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+ GY N + A +++ + G+ P+ +LI+A + A F M K G+
Sbjct: 263 MDGYCKTANVKQALHLYQGMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGV 322
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFK---RLGVVEE 398
P+ ++ K + A + L+++E+ F + + T + K RLG VEE
Sbjct: 323 VPNVVVFNSLIDGYSKAGNCSEATDLLLEMEK--FKISPDVF-TYSILIKNACRLGTVEE 379
Query: 399 VEHVLR 404
+ +L+
Sbjct: 380 ADDILK 385
>gi|410110093|gb|AFV61126.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
microcephala]
Length = 440
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 102/224 (45%), Gaps = 12/224 (5%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 219 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDR 278
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ + +M++AY RAG++ + LL E+ + + + +L
Sbjct: 279 AAMLFQKLRSSGIEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDTAIHILA 337
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + F MR G P
Sbjct: 338 G---AGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFP 394
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLA 387
+A++L+A K + ++A D +M +E C +
Sbjct: 395 DSDVIAIVLNAYGKLQEFDKA--------NDVYMEMQEVGCVFS 430
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 102/237 (43%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 119 NTASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 178
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 179 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 238
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G+E
Sbjct: 239 LEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQILF 298
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE +V R+
Sbjct: 299 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAG----AGRIEEATYVFRQ 351
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 102/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + MK G + + + + ++ MY + A
Sbjct: 81 FTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTASYSTLLTMYVENKKFLEAL 140
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 141 SVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 200
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + ++ Y + +KA Q M+ G+E
Sbjct: 201 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIE 257
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 258 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQILFQTMIVAYERAGLVAHAKRL 317
Query: 403 LRE 405
L E
Sbjct: 318 LHE 320
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 75/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ A + L M++ D V + ++ + K + A F +K
Sbjct: 18 YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 77
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +M+ + +A + L+ EM A V + Y LL Y N
Sbjct: 78 RSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTASYSTLLTMYVENKKFL 137
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF ++ D C ++I+ Y G +++A F MRK G+EP+
Sbjct: 138 EALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 189
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 33/183 (18%), Positives = 81/183 (44%), Gaps = 2/183 (1%)
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
F+E++ D+ +Y +++ + + G+ D L++M+ V +Y L+
Sbjct: 3 FDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRK 62
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
+ A +F ++ +G TPD +IN + A ++A + M+ AG+ P+
Sbjct: 63 LCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTAS 122
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYG 407
+ +L+ + + AL ++ ++ + + +LG+ +E + + +G
Sbjct: 123 YSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF--WG 180
Query: 408 LRE 410
+R+
Sbjct: 181 MRK 183
>gi|302776756|ref|XP_002971525.1| hypothetical protein SELMODRAFT_95815 [Selaginella moellendorffii]
gi|300160657|gb|EFJ27274.1| hypothetical protein SELMODRAFT_95815 [Selaginella moellendorffii]
Length = 356
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 102/229 (44%), Gaps = 2/229 (0%)
Query: 170 IRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFE 229
+R Y +I Y + + ++A + M G D VT ++V K G + F
Sbjct: 30 LRPYNAMIAAYYQAKRPKDAWDVYYQMLAEGIDPDDVTYDILVSGSGKNG--YPIDRLFL 87
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
EIK G L RSY ++ A+ + G +D+ E ++REM QE+ + AL+ Y+M+
Sbjct: 88 EIKSRGVALTLRSYNVVICAFTKEGSIDKVEEVIREMIRQELRPDLFSFNALIAAYAMSR 147
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
E +VF ++ AG+ PD LI + + ++A F+ M +P +
Sbjct: 148 KPERGLQVFSNMKAAGVLPDIVTYTTLIQMFSRSAMHKEAIEMFEEMVVNKCQPDFFVYS 207
Query: 350 LILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
L++S K + AL L+ +G +L + G++EE
Sbjct: 208 LLVSVYGKAGLVADALLIFHRLQLEGHRPNIVTYTSLISAHLHKGLLEE 256
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 91/228 (39%), Gaps = 18/228 (7%)
Query: 115 PETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYT 174
P+ + + L+AA+ KP R L V +K +I YT
Sbjct: 131 PDLFSFNALIAAYAMSRKPERG--LQVFSNMK----------------AAGVLPDIVTYT 172
Query: 175 KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLL 234
+I + + + A M D +++V +Y KAG + A F ++L
Sbjct: 173 TLIQMFSRSAMHKEAIEMFEEMVVNKCQPDFFVYSLLVSVYGKAGLVADALLIFHRLQLE 232
Query: 235 GEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGA 294
G + +Y S++ A++ G+L+ +M+A + ++ Y+ G A
Sbjct: 233 GHRPNIVTYTSLISAHLHKGLLEESRKHFSQMEAYGCRADVHLLNTMIDAYAKAGMVNDA 292
Query: 295 QRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
+ + G+ P+ A+++ + AG +A A+ +M +AG +
Sbjct: 293 ANLLHRLTAQGVCPNRASYAIIVEGFLHAGHVDEALAAYASMSEAGFK 340
>gi|357449533|ref|XP_003595043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484091|gb|AES65294.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1070
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 101/243 (41%), Gaps = 30/243 (12%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E+ + YT +I G+ K ++ + L M + G I ++VT T ++ Y K G
Sbjct: 259 MVEKGICHDFVSYTILIDGFSKLGDVEKSFTFLAKMIKEGIIPNKVTYTAIMSAYCKKGR 318
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMD------------- 267
++ A F +K +G LD+ + ++ + R G DR LL EM+
Sbjct: 319 IEEAFGLFVRMKDMGIELDEFVFVVLIDGFGRVGDFDRVFQLLVEMEKRGIGPNVVTYNA 378
Query: 268 -----------------AQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDA 310
++ V Y LL GY+ N G + + ++ AGI+ D
Sbjct: 379 VVNGLSKYGRTQEADEFSKNVTADVVTYSTLLHGYTEEDNVLGILQTKKRLEEAGISMDV 438
Query: 311 RMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLID 370
MC +LI A M + Y ++ M + L P+ ++ K ++N ALE D
Sbjct: 439 VMCNVLIRALFMMQAYEDVYALYKGMPEMDLVPNSITYCTMIDGYCKVGKINEALEVFDD 498
Query: 371 LER 373
+
Sbjct: 499 FRK 501
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 77/171 (45%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
NI Y II+G + A ++++ + ++T ++ + G L+ AE F
Sbjct: 748 NIVIYNSIINGLCHDGCLIEAFRLFDSLEKLNLMTSEITYATLIYALCREGYLQDAEHVF 807
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+++ L G + Y S+++A + G L++ LL +M+ Q + + +++ Y
Sbjct: 808 KKMVLNGFQPKTQVYNSLLVATSKIGQLEKAFELLNDMEKQYIKFDNFTVSSVINCYCQK 867
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
G+ EGA + + I+PD +I G+ ++ + + M ++
Sbjct: 868 GDMEGALEFYYKFKGKDISPDFLGFLYMIRGLCTKGRMEETRSVLREMLQS 918
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 73/170 (42%)
Query: 206 VTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLRE 265
VT T +V K G + +++ G LD Y V YV +L +RE
Sbjct: 199 VTYTAVVNALCKLGRVDEVCGLVRKMEEDGLDLDVVLYSVWVCGYVEEKVLVEVFRKMRE 258
Query: 266 MDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQ 325
M + + Y L+ G+S G+ E + + GI P+ +++AY G+
Sbjct: 259 MVEKGICHDFVSYTILIDGFSKLGDVEKSFTFLAKMIKEGIIPNKVTYTAIMSAYCKKGR 318
Query: 326 SQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
++A+ F M+ G+E + +++ + +R + L+++E+ G
Sbjct: 319 IEEAFGLFVRMKDMGIELDEFVFVVLIDGFGRVGDFDRVFQLLVEMEKRG 368
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 70/172 (40%)
Query: 172 DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEI 231
DY +IHG K + A + ++++G + V ++ G L A F+ +
Sbjct: 716 DYGVVIHGLCKGGYLNKALDLCTLIEKKGVNLNIVIYNSIINGLCHDGCLIEAFRLFDSL 775
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
+ L + +Y +++ A R G L E + ++M ++VY +LL S G
Sbjct: 776 EKLNLMTSEITYATLIYALCREGYLQDAEHVFKKMVLNGFQPKTQVYNSLLVATSKIGQL 835
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
E A + ++ I D + +IN Y G + A + + + P
Sbjct: 836 EKAFELLNDMEKQYIKFDNFTVSSVINCYCQKGDMEGALEFYYKFKGKDISP 887
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 84/215 (39%), Gaps = 21/215 (9%)
Query: 205 QVTLTVMVVMYS-------KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLD 257
Q L VM V Y K G L A + I+ G L+ Y S++ G L
Sbjct: 707 QDDLPVMYVDYGVVIHGLCKGGYLNKALDLCTLIEKKGVNLNIVIYNSIINGLCHDGCLI 766
Query: 258 RGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
L ++ + Y L+ G + A+ VF+ + G P ++ L+
Sbjct: 767 EAFRLFDSLEKLNLMTSEITYATLIYALCREGYLQDAEHVFKKMVLNGFQPKTQVYNSLL 826
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLI-----DLE 372
A GQ +KA+ +M K ++ + V+ +++ ++ + ALEF D+
Sbjct: 827 VATSKIGQLEKAFELLNDMEKQYIKFDNFTVSSVINCYCQKGDMEGALEFYYKFKGKDIS 886
Query: 373 RD--GFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
D GF+ CT G +EE VLRE
Sbjct: 887 PDFLGFLYMIRGLCT-------KGRMEETRSVLRE 914
>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
Length = 894
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 96/220 (43%), Gaps = 10/220 (4%)
Query: 159 LALLEES----FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMV-- 212
L LL E+ E N YT +IHG+ + ++ A + L+ M RG D VTL ++
Sbjct: 436 LKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHG 495
Query: 213 -VMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
V+ + M E E +++ D Y ++ + ML + LL EM Q+V
Sbjct: 496 LVVSGQVDEALMVREKMAERQVMP---DANIYNVLISGLCKKRMLSAAKNLLVEMLEQKV 552
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
VY L+ G+ + A+++FE ++ G D +I Y +G +A
Sbjct: 553 QPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVM 612
Query: 332 AFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDL 371
+MRK G P + ++ K+ + AL FL D+
Sbjct: 613 CMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDM 652
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 86/185 (46%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+LE+ + + YT +I G+ + ++ +A M+ +G D V M+ Y K+G
Sbjct: 547 MLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGM 606
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A ++ +G D+ +Y +++ Y + G + L +M + Y +
Sbjct: 607 MNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYAS 666
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ GY GN++ A+ +F ++Q G+ P+ +LI + ++ +A F++M
Sbjct: 667 LICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNH 726
Query: 341 LEPSD 345
P+D
Sbjct: 727 CSPND 731
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 2/178 (1%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
+ANI Y +I G KK + A+N L+ M + D+ T ++ + ++ L A +
Sbjct: 520 DANI--YNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARK 577
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
FE ++ G D +Y +M+ Y ++GM++ + + M Y L+ GY+
Sbjct: 578 IFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYA 637
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
G+ + A R + P+ A LI Y G + A F +M+ GL P+
Sbjct: 638 KKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPN 695
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 99/248 (39%), Gaps = 29/248 (11%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I Y +I GY K + A + +M++ G I D+ T T ++ Y+K G++K A
Sbjct: 590 DIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAA---- 645
Query: 229 EEIKLLGEPLDKR------SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
++ L + + +R +Y S++ Y G D EVL M ++ ++ Y L+
Sbjct: 646 --LRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLI 703
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA-----YQM----------AGQSQ 327
+ A FE + +P+ L+N Y M A +
Sbjct: 704 GSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNGLTNCRYGMINSNCSDTDQAHKKS 763
Query: 328 KAYTAFQNMRKAGLEPSDKCV-ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
F+ + GL+P A+I S C + N L +A+E + G + +L
Sbjct: 764 ALLDVFKGLISDGLDPRISAYNAIIFSLC-RHNMLGKAMELKEKMSNKGCLPDPVTFLSL 822
Query: 387 AAWFKRLG 394
F +G
Sbjct: 823 LYGFSSVG 830
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 88/220 (40%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y IIH G+K + E+ L MK RG + ++ K + A ++
Sbjct: 349 YGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMV 408
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
D ++ +++ A+ R G ++ LLRE +E+ Y L+ G+ + G
Sbjct: 409 ASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVM 468
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + G TPD LI+ ++GQ +A + M + + P +++
Sbjct: 469 VASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLI 528
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKR 392
S K+ L+ A L+++ K TL F R
Sbjct: 529 SGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIR 568
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 65/172 (37%)
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
D S MV G ++ G L+ + G+ Y L+ GY G+ +
Sbjct: 275 DDYSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLL 334
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
++ GI P +I+ K + M++ GL P+ + ++ A K
Sbjct: 335 GEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKC 394
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRE 410
++AL L + F TL A F R G VEE +LRE RE
Sbjct: 395 RSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRE 446
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 80/177 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +++GYGK + A M + G D + T++V + AG + A FE++K
Sbjct: 933 YNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLK 992
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y M+ R+ + L EM + + Y +L+ + G E
Sbjct: 993 QAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIE 1052
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
A +++E +QF G+ P+ LI Y ++G S+ AY ++ M G +P+ A
Sbjct: 1053 EAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFA 1109
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 96/215 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ E + +++ ++ ++ GK+ I+ L M+ G + T T+ + + + G
Sbjct: 220 MVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGK 279
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + + G D +Y ++ A A LD L +M + Y
Sbjct: 280 IDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVT 339
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL +S G+ + ++++ ++ G PD +L+NA AG+ +A+ MRK G
Sbjct: 340 LLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQG 399
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+ P+ ++S + N+L+ AL+ ++E G
Sbjct: 400 VLPNLHTYNTLISGLLRANRLDDALDLFSNMESLG 434
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 98/237 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ YT +I ++ +A MK D+VT ++ +S G+L E+ +
Sbjct: 298 DVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIW 357
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++ G D ++ +V A +AG ++ LL M Q V Y L+ G
Sbjct: 358 TEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRA 417
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
+ A +F ++ G+ P A LLI+ + +G KA F+ M+ G+ P+
Sbjct: 418 NRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVAC 477
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
L + + +L A +L+ G + + ++G V+E +L E
Sbjct: 478 NASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSE 534
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 99/233 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I +GK +I + M RG + +T +++ K+ L A + + +
Sbjct: 828 YNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLV 887
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
++G ++ +++G LD + M S +Y L+ GY G+ +
Sbjct: 888 SGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVD 947
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A F+ + GI PD + +L++ +AG+ A F+ +++AGL+P L++
Sbjct: 948 TACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMI 1007
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ + + AL +++ G + +L +G++EE + E
Sbjct: 1008 NGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEE 1060
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 103/257 (40%), Gaps = 7/257 (2%)
Query: 159 LALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
+ LLEE NI YT I G+ +I A + M G D VT TV++
Sbjct: 249 MGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDA 308
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
A L A F ++K DK +Y +++ + G LD+ E + EM+A
Sbjct: 309 LCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPD 368
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+ L+ G A + + ++ G+ P+ LI+ A + A F
Sbjct: 369 VVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFS 428
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF---MVGKEASCTLAAWFK 391
NM G+EP+ L++ K +ALE ++ G +V AS A
Sbjct: 429 NMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMG 488
Query: 392 RLGVVEEVEHVLREYGL 408
RLG + + + L+ GL
Sbjct: 489 RLGEAKAMFNELKSSGL 505
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 88/201 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ + + E M+ G+ D VT T++V KAG + A + + ++
Sbjct: 337 YVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMR 396
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +Y +++ +RA LD L M++ V + Y L+ + +G+
Sbjct: 397 KQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPG 456
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A FE ++ GI P+ C + + G+ +A F ++ +GL P +++
Sbjct: 457 KALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMM 516
Query: 353 SACEKENQLNRALEFLIDLER 373
K Q++ A++ L ++ +
Sbjct: 517 KCYSKVGQVDEAIKLLSEMSK 537
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 92/207 (44%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I G + ++ +A + M+ G T +++ + K+G+ A ETF
Sbjct: 403 NLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETF 462
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++K G + + + + + G L + + E+ + + S Y +++ YS
Sbjct: 463 EKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKV 522
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A ++ + PD + LI+ AG+ ++A+ F M + L P+
Sbjct: 523 GQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTY 582
Query: 349 ALILSACEKENQLNRALEFLIDLERDG 375
++L+ KE Q+ +A++ + G
Sbjct: 583 NILLAGLGKEGQIQKAVQLFESMNGHG 609
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 80/196 (40%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I +GK A T MK RG + V + ++ G L A+ F E+K
Sbjct: 442 YILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELK 501
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y M+ Y + G +D LL EM + V +L+ G E
Sbjct: 502 SSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVE 561
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A ++F ++ + P +L+ GQ QKA F++M G P+ +L
Sbjct: 562 EAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLL 621
Query: 353 SACEKENQLNRALEFL 368
K ++++ AL+
Sbjct: 622 DCLCKNDEVDLALKMF 637
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 118/288 (40%), Gaps = 55/288 (19%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL----KMA 224
++ + IIHG+ K+ QI+NA MK+ D VTL ++ K+G + ++
Sbjct: 648 DVLTFNTIIHGFIKQNQIKNAIWLFHQMKKL-LRPDHVTLCTLLPGVIKSGQIEDAFRIT 706
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYV--RAGM---LDRGEVLL---------------- 263
E+ F ++ G +D RS+ VM + AG + GE L+
Sbjct: 707 EDFFYQV---GSNID-RSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIK 762
Query: 264 ------REMDAQEVYVGS----------EVYKALLRGYSMNGNSEGAQRVFEAIQFAGIT 307
+ A+ V+V +VY L+ G+ N E A +FE ++ AG
Sbjct: 763 VLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCA 822
Query: 308 PDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
PD LI+A+ +G+ + + + M G +P+ +++S K N+L++A++
Sbjct: 823 PDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDL 882
Query: 368 LIDLERDGFMVGKEASCTLAAWFK------RLGVVEEVEHVLREYGLR 409
+L F CT RL E+ + YG R
Sbjct: 883 YYNLVSGDF---SPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCR 927
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 74/158 (46%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++E +++ YT ++ ++ +A + +K+ G D V +M+ ++
Sbjct: 956 MVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQR 1015
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A F E++ G D +Y S+++ GM++ + E+ + Y A
Sbjct: 1016 TEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNA 1075
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLIN 318
L+RGY+++GNSE A +++ + G P+ A L N
Sbjct: 1076 LIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQLPN 1113
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 74/184 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + N Y +I K ++ A + + F T ++ K+G
Sbjct: 851 MLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGR 910
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A E F+ + G + Y +V Y + G +D + M + + + Y
Sbjct: 911 LDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTI 970
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ + G + A FE ++ AG+ PD L+IN + ++++A + F M+ G
Sbjct: 971 LVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRG 1030
Query: 341 LEPS 344
+ P
Sbjct: 1031 IVPD 1034
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 41/241 (17%), Positives = 99/241 (41%)
Query: 132 KPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAEN 191
KP + ++ +L + H ++ + + + ++ +T +++ K +I A +
Sbjct: 331 KPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFD 390
Query: 192 TLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYV 251
L M+++G + + T ++ +A L A + F ++ LG +Y ++ +
Sbjct: 391 LLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHG 450
Query: 252 RAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDAR 311
++G + +M A+ + A L + G A+ +F ++ +G+ PD+
Sbjct: 451 KSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSV 510
Query: 312 MCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDL 371
+++ Y GQ +A M K EP + ++ K ++ A + +
Sbjct: 511 TYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRM 570
Query: 372 E 372
E
Sbjct: 571 E 571
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 77/192 (40%), Gaps = 35/192 (18%)
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG-----------MLDRG--------- 259
N+++A FEE+K G D +Y S++ A+ ++G ML RG
Sbjct: 805 NVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYN 864
Query: 260 ---------EVLLREMDAQEVYVGSE------VYKALLRGYSMNGNSEGAQRVFEAIQFA 304
L + MD V + + L+ G +G + A +F+ +
Sbjct: 865 MVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHY 924
Query: 305 GITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
G P++ + +L+N Y G A F+ M K G+ P K +++ +++ A
Sbjct: 925 GCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDA 984
Query: 365 LEFLIDLERDGF 376
L + L++ G
Sbjct: 985 LHYFEKLKQAGL 996
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 69/171 (40%), Gaps = 2/171 (1%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEI-KLLGEPLDKRSYGSMVMAYVRAG 254
+K G D VT +M+ YSK G + A + E+ K+ EP D S++ +AG
Sbjct: 500 LKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEP-DVIVINSLIDTLYKAG 558
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
++ + M+ + Y LL G G + A ++FE++ G +P+
Sbjct: 559 RVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFN 618
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
L++ + A F M P I+ K+NQ+ A+
Sbjct: 619 TLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAI 669
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 44/230 (19%), Positives = 82/230 (35%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E F N Y +IH + + A M G T + ++V K N+K
Sbjct: 187 EAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIK 246
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
EE++ +G + +Y + R G +D +++ MD Y L+
Sbjct: 247 TVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLI 306
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
+ A +F ++ + PD L++ + G K + M G
Sbjct: 307 DALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYA 366
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKR 392
P ++++A K ++N A + L + + G + TL + R
Sbjct: 367 PDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLR 416
>gi|410110141|gb|AFV61150.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
turbinata]
Length = 441
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 102/224 (45%), Gaps = 12/224 (5%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 220 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGVEPNSITYSTIISIWGKVGKLDR 279
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ + +M++AY RAG++ + LL E+ + + + +L
Sbjct: 280 AAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDTAIHILA 338
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + F MR G P
Sbjct: 339 G---AGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVIEVFDKMRGLGYFP 395
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLA 387
+A++L+A K + ++A D +M +E C +
Sbjct: 396 DSDVIAIVLNAYGKLQEFDKA--------NDVYMEMQEVGCVFS 431
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 102/237 (43%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 120 NTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 179
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 180 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 239
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q G+ P++ + +I+ + G+ +A FQ +R +G+E
Sbjct: 240 LEHEKANNLIQEMQSRGVEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILF 299
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE +V R+
Sbjct: 300 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAG----AGRIEEATYVFRQ 352
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 102/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + MK G + + + + ++ MY + A
Sbjct: 82 FXPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEAL 141
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 142 SVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 201
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + ++ Y + +KA Q M+ G+E
Sbjct: 202 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGVE 258
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 259 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRL 318
Query: 403 LRE 405
L E
Sbjct: 319 LHE 321
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ A + L M++ D V + ++ + K + A F +K
Sbjct: 19 YSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 78
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +M+ + +A + L+ EM V + Y LL Y N
Sbjct: 79 XSGFXPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFL 138
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF ++ D C ++I+ Y G +++A F MRK G+EP+
Sbjct: 139 EALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 190
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/183 (17%), Positives = 81/183 (44%), Gaps = 2/183 (1%)
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
F+E++ D+ +Y +++ + + G+ D L++M+ +V +Y L+
Sbjct: 4 FDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRK 63
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
+ A +F ++ +G PD +IN + A ++A + M+ AG+ P+
Sbjct: 64 LCDYSKAISIFSRLKXSGFXPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTS 123
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYG 407
+ +L+ + + AL ++ ++ + + +LG+ +E + + +G
Sbjct: 124 YSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF--WG 181
Query: 408 LRE 410
+R+
Sbjct: 182 MRK 184
>gi|255660880|gb|ACU25609.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 484
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 112/243 (46%), Gaps = 6/243 (2%)
Query: 141 VLKQLKLMEHPL-YLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR 199
VL K EH L + + E + L FE N + KII G+ ++ +A LL M ++
Sbjct: 18 VLHSSKTSEHALQFFRWVERSNL---FEHNRETHLKIIEILGRASKLNHARCILLDMPKK 74
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G D+ +M+ Y K G ++ + + F++++ LG +SY + +R G
Sbjct: 75 GLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNXLFKVILRRGRYMMA 134
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+ +M ++ + + ++ G+ ++G E A R FE ++ I+PD +IN
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMING 194
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
Y + ++A F M+ +EP+ ++ +Q++ AL + +++ GF +
Sbjct: 195 YYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK--GFGIK 252
Query: 380 KEA 382
A
Sbjct: 253 PNA 255
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 8/202 (3%)
Query: 163 EESFEANIRDYT---KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
E E I+ Y K+I G+ M + N +L+ G + T VM+ + +G
Sbjct: 108 ELGVERTIKSYNXLFKVILRRGRYMMAKRYFNKMLS---EGIEPTRHTFNVMIWGFFLSG 164
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A FE++K D +Y +M+ Y R ++ E EM + + Y
Sbjct: 165 KVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYT 224
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L++GY + A R+ E ++ GI P+A + L+ A + +A + M
Sbjct: 225 TLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDK 284
Query: 340 GLEPSDKCV--ALILSACEKEN 359
L P+D + LI S C+ N
Sbjct: 285 YLAPTDNSIFMRLISSHCKSGN 306
>gi|413946759|gb|AFW79408.1| hypothetical protein ZEAMMB73_086527 [Zea mays]
Length = 865
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 4/152 (2%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D T T V MY+K G L+ A++ F+ ++L + ++ S+V Y AG D L+
Sbjct: 346 DVYTGTAFVDMYAKCGRLEYAQKVFDTLELR----NITTWNSLVAGYSNAGQFDHALDLV 401
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
EM + + L+ GYSMNG S A + ++ G+TP+ LI+
Sbjct: 402 EEMKRNRLDPDITTWNGLISGYSMNGRSSQAVLLLRQMKAIGLTPNVVSWTSLISGSCHN 461
Query: 324 GQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
G + ++ F M+K ++PS ++++L AC
Sbjct: 462 GDYEDSFYFFNEMQKDHVQPSVVTMSVLLRAC 493
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 13/163 (7%)
Query: 181 GKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDK 240
G + + E A++RR + D V T ++ MYSK+GNL A FE I+ E +
Sbjct: 495 GLALLAKGKELHCFALRRRAYDRDMVVATALIDMYSKSGNLASATRIFERIQ---EEKNL 551
Query: 241 RSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG------SEVYKALLRG-YSMNGNSEG 293
S+ +M+ G L +M + G S + ALL SM +EG
Sbjct: 552 VSWNAMLTGLAAHGQGREAIALFDDMCSASAGAGAGLKPDSITFTALLTACRSMELITEG 611
Query: 294 AQRVFEAIQFA-GITPDARMCALLINAYQMAGQSQKAYTAFQN 335
F+A++ G+TP A +++ G +A T F N
Sbjct: 612 WD-YFDAMESRYGVTPTVENYACMVDLLARCGYLDEA-TDFIN 652
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/205 (20%), Positives = 87/205 (42%), Gaps = 10/205 (4%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET---FE 229
+ ++ G + + + A + +M RG D +++ ++ + G L E F
Sbjct: 280 WNAVLSGCARHGRDREAFGVVRSMLERGIPPDSSSMSSLLKSVASLGLLAHGMEAHCFFL 339
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
+L EP D + + V Y + G L+ + + ++ + + + +L+ GYS G
Sbjct: 340 RHRL--EP-DVYTGTAFVDMYAKCGRLEYAQKVFDTLELRNI----TTWNSLVAGYSNAG 392
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
+ A + E ++ + PD LI+ Y M G+S +A + M+ GL P+
Sbjct: 393 QFDHALDLVEEMKRNRLDPDITTWNGLISGYSMNGRSSQAVLLLRQMKAIGLTPNVVSWT 452
Query: 350 LILSACEKENQLNRALEFLIDLERD 374
++S + F ++++D
Sbjct: 453 SLISGSCHNGDYEDSFYFFNEMQKD 477
>gi|255660862|gb|ACU25600.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 484
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 113/243 (46%), Gaps = 6/243 (2%)
Query: 141 VLKQLKLMEHPL-YLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR 199
VL K EH L + + E + L FE N + KII G+ ++ +A LL M ++
Sbjct: 18 VLHSSKTSEHALQFFRWVERSNL---FEHNRETHLKIIEILGRASKLNHARCILLDMPKK 74
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G D+ +M+ Y K G ++ + + F++++ LG +SY ++ +R G
Sbjct: 75 GLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMA 134
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+ +M ++ + + ++ G+ ++G E A R FE ++ I+PD +IN
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMING 194
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
Y + ++A F M+ +EP+ ++ +Q++ AL + +++ GF +
Sbjct: 195 YYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK--GFGIK 252
Query: 380 KEA 382
A
Sbjct: 253 PNA 255
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 8/202 (3%)
Query: 163 EESFEANIRDYT---KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
E E I+ Y K+I G+ M + N +L+ G + T VM+ + +G
Sbjct: 108 ELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLS---EGIEPTRHTFNVMIWGFFLSG 164
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A FE++K D +Y +M+ Y R ++ E EM + + Y
Sbjct: 165 KVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYT 224
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L++GY + A R+ E ++ GI P+A + L+ A + +A + M
Sbjct: 225 TLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDK 284
Query: 340 GLEPSDKCVA--LILSACEKEN 359
L P+D + LI S C+ N
Sbjct: 285 YLAPTDNSIIMRLISSHCKSGN 306
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 29/166 (17%), Positives = 69/166 (41%), Gaps = 9/166 (5%)
Query: 203 CDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVL 262
D + ++ + K+GNL A + + + L P + YG ++ + +AG D+ L
Sbjct: 289 TDNSIIMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGLLIENFCKAGQYDKAVKL 348
Query: 263 LREMDAQEV--------YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
L ++ +++ ++ Y +++ NG + A+ + + G+ D
Sbjct: 349 LDKLIEKDIILRPQSTLHLEPSAYNSMIEYLCNNGQASKAETLVRQLMKLGVQ-DPTALN 407
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQ 360
LI + G A+ + M + ++ L++ + K+N+
Sbjct: 408 TLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNLLVQSYLKKNE 453
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 99/224 (44%), Gaps = 8/224 (3%)
Query: 153 YLQVAELALLEESFEA--------NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICD 204
Y V EL + F A ++ YT +I+G+ K + A N M ++ +
Sbjct: 314 YFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPG 373
Query: 205 QVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLR 264
VT + ++ K+G + + +E++ G P + +Y S++ + G LDR L
Sbjct: 374 IVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFN 433
Query: 265 EMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAG 324
+M Q + S + LL G G + AQ F+ + G D ++IN + G
Sbjct: 434 KMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQG 493
Query: 325 QSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFL 368
++A T M + G P+ +I++A K+++ ++A + L
Sbjct: 494 LLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLL 537
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 97/235 (41%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ N+ Y ++ K+ +++ A+N L M + D +T + ++ Y LK
Sbjct: 263 KTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKK 322
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A+ F + L+G D SY ++ + + M+D L +EM + + G Y +L+
Sbjct: 323 AQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLID 382
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G +G + + ++ GI + LI+ G +A F M+ G+ P
Sbjct: 383 GLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRP 442
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
++L K +L A E DL G+ + + + G++EE
Sbjct: 443 CSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEE 497
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 33/176 (18%), Positives = 69/176 (39%), Gaps = 6/176 (3%)
Query: 170 IRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFE 229
I + KI+ + K A + ++ +G D +TL +++ + G +
Sbjct: 59 IIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLA 118
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
+I G ++ +++ G +++ ++ AQ + Y L+ G G
Sbjct: 119 KILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIG 178
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINA---YQMAGQSQKAYTAFQNMRKAGLE 342
++ GA ++ I P+ M +I+A YQ+ + AY F M G+
Sbjct: 179 DTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSE---AYGLFSEMTAKGIS 231
>gi|224084978|ref|XP_002307458.1| predicted protein [Populus trichocarpa]
gi|222856907|gb|EEE94454.1| predicted protein [Populus trichocarpa]
Length = 440
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 84/186 (45%), Gaps = 1/186 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ + ++ K ++ A+ ++K R F+ D T ++++ + K NL A E F
Sbjct: 124 NLAAFNGLLSALCKSKNVRKAQEIFDSIKDR-FVPDSKTYSILLEGWGKDPNLPKAREIF 182
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E+ G D +YG MV +AG +D ++ EMD+ +Y L+ Y +
Sbjct: 183 REMVSNGCRPDIVTYGIMVDVLCKAGRVDEALGIVNEMDSTVCKPTPFIYSVLVHTYGIE 242
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A F ++ GI PD + LI A+ A + + Y M G+ P+ +
Sbjct: 243 NRIEDAVSTFLEMENNGIEPDVAVYNALIGAFCKANRLKNVYRVLNEMDCKGVTPNSRTF 302
Query: 349 ALILSA 354
+ILS+
Sbjct: 303 NIILSS 308
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 75/173 (43%), Gaps = 3/173 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ ++H YG + +I++A +T L M+ G D ++ + KA LK E+
Sbjct: 232 YSVLVHTYGIENRIEDAVSTFLEMENNGIEPDVAVYNALIGAFCKANRLKNVYRVLNEMD 291
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRG-EVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
G + R++ ++ + + G D V LR + E ++ Y +++ +
Sbjct: 292 CKGVTPNSRTFNIILSSLIGRGETDEAYRVFLRMIKVCEP--DADTYTMMIKMFCERDEL 349
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
+ A +V++ ++ P +LIN G +A + M + G+ PS
Sbjct: 350 KKALKVWKYMKLKRFMPSMHTFQVLINGLCEKGDVTQACVLLEEMIEKGIRPS 402
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/266 (17%), Positives = 111/266 (41%), Gaps = 5/266 (1%)
Query: 158 ELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSK 217
E A + + +++ + +I K Q Q + + MK + + + T +++ Y++
Sbjct: 44 EWAEKQRHYNHSVKAFHTVIDSLAKIRQYQLMWDVVKVMKSKRMV-NVETFCIIMRKYAR 102
Query: 218 AGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
A ++ A TF + P + ++ ++ A ++ + + + + + + V S+
Sbjct: 103 AQKVEEAVYTFNIMDKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDSIKDRFV-PDSKT 161
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y LL G+ + N A+ +F + G PD ++++ AG+ +A M
Sbjct: 162 YSILLEGWGKDPNLPKAREIFREMVSNGCRPDIVTYGIMVDVLCKAGRVDEALGIVNEMD 221
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
+P+ ++++ EN++ A+ +++E +G L F + ++
Sbjct: 222 STVCKPTPFIYSVLVHTYGIENRIEDAVSTFLEMENNGIEPDVAVYNALIGAFCKANRLK 281
Query: 398 EVEHVLREYGLRETYSKIPGSRSIAL 423
V VL E + P SR+ +
Sbjct: 282 NVYRVLNEMDCKGV---TPNSRTFNI 304
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/239 (18%), Positives = 97/239 (40%), Gaps = 8/239 (3%)
Query: 137 DWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAM 196
D LA ++Q +LM + +++ N+ + I+ Y + +++ A T M
Sbjct: 64 DSLAKIRQYQLMWDVV-------KVMKSKRMVNVETFCIIMRKYARAQKVEEAVYTFNIM 116
Query: 197 KRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGML 256
+ + ++ K+ N++ A+E F+ IK P D ++Y ++ + + L
Sbjct: 117 DKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDSIKDRFVP-DSKTYSILLEGWGKDPNL 175
Query: 257 DRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALL 316
+ + REM + Y ++ G + A + + P + ++L
Sbjct: 176 PKAREIFREMVSNGCRPDIVTYGIMVDVLCKAGRVDEALGIVNEMDSTVCKPTPFIYSVL 235
Query: 317 INAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
++ Y + + + A + F M G+EP ++ A K N+L L +++ G
Sbjct: 236 VHTYGIENRIEDAVSTFLEMENNGIEPDVAVYNALIGAFCKANRLKNVYRVLNEMDCKG 294
>gi|255660888|gb|ACU25613.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 481
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 112/243 (46%), Gaps = 6/243 (2%)
Query: 141 VLKQLKLMEHPL-YLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR 199
VL K EH L + + E + L FE N + KII G+ ++ +A LL M ++
Sbjct: 18 VLHSSKTSEHALQFFRWVERSNL---FEHNRETHLKIIEILGRASKLNHARCILLDMPKK 74
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G D+ +M+ Y K G ++ + + F++++ LG +SY + +R G
Sbjct: 75 GLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNXLFKVILRRGRYMMA 134
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+ +M ++ + + ++ G+ ++G E A R FE ++ I+PD +IN
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMING 194
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
Y + ++A F M+ +EP+ ++ +Q++ AL + +++ GF +
Sbjct: 195 YYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK--GFGIK 252
Query: 380 KEA 382
A
Sbjct: 253 PNA 255
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 8/202 (3%)
Query: 163 EESFEANIRDYT---KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
E E I+ Y K+I G+ M + N +L+ G + T VM+ + +G
Sbjct: 108 ELGVERTIKSYNXLFKVILRRGRYMMAKRYFNKMLS---EGIEPTRHTFNVMIWGFFLSG 164
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A FE++K D +Y +M+ Y R ++ E EM + + Y
Sbjct: 165 KVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYT 224
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L++GY + A R+ E ++ GI P+A + L+ A + +A + M
Sbjct: 225 TLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDK 284
Query: 340 GLEPSDKCV--ALILSACEKEN 359
L P+D + LI S C+ N
Sbjct: 285 YLAPTDNSIFMRLISSHCKSGN 306
>gi|255660874|gb|ACU25606.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 484
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 113/243 (46%), Gaps = 6/243 (2%)
Query: 141 VLKQLKLMEHPL-YLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR 199
VL K EH L + + E + L FE N + KII G+ ++ +A LL M ++
Sbjct: 18 VLHSSKTSEHALQFFRWVERSNL---FEHNRETHLKIIEILGRASKLNHARCILLDMPKK 74
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G D+ +M+ Y K G ++ + + F++++ LG +SY ++ +R G
Sbjct: 75 GLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMA 134
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+ +M ++ + + ++ G+ ++G E A R FE ++ I+PD +IN
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMING 194
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
Y + ++A F M+ +EP+ ++ +Q++ AL + +++ GF +
Sbjct: 195 YYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK--GFGIK 252
Query: 380 KEA 382
A
Sbjct: 253 PNA 255
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 8/202 (3%)
Query: 163 EESFEANIRDYT---KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
E E I+ Y K+I G+ M + N +L+ G + T VM+ + +G
Sbjct: 108 ELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLS---EGIEPTRHTFNVMIWGFFLSG 164
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A FE++K D +Y +M+ Y R ++ E EM + + Y
Sbjct: 165 KVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYT 224
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L++GY + A R+ E ++ GI P+A + L+ A + +A + M
Sbjct: 225 TLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDK 284
Query: 340 GLEPSDKCV--ALILSACEKEN 359
L P+D + LI S C+ N
Sbjct: 285 YLAPTDNSIFLRLISSHCKSGN 306
>gi|108711657|gb|ABF99452.1| Calreticulin family protein, expressed [Oryza sativa Japonica
Group]
Length = 1111
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 105/223 (47%), Gaps = 13/223 (5%)
Query: 152 LYLQVAELA--LLEESFEANIRDYTKIIHG--YGKKMQIQNAENTLLAMKRRGF---ICD 204
+Y V LA ++EE + T+I+ Y + +++ A +++ RRGF + D
Sbjct: 128 MYSDVLALAVTMVEEGVLPDRFLITRILQACAYAEDLELGRALHSMAI--RRGFMGRVKD 185
Query: 205 QVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLR 264
++VMY+K G+L A + F+++ D ++ SM+ Y R+ + LL
Sbjct: 186 VPVGNSVLVMYAKCGDLGWARKVFDKMVCR----DLGTWNSMIFGYCRSAEWEEARHLLD 241
Query: 265 EMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAG 324
M + G + L+ Y+ G+ + A + ++ +G+ PD L++ +
Sbjct: 242 SMRQEGTQPGVVTWNTLISSYARFGDLDVAMELLGQMEESGVAPDVVTWTSLVSGFVHMD 301
Query: 325 QSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
+S +A F MR AG+EP+ +A +SAC LN+A E
Sbjct: 302 RSDEALRCFIRMRLAGVEPNGMSIACAISACASLKLLNQAKEL 344
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 60/138 (43%), Gaps = 4/138 (2%)
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G + + ++ +V MY+K G + A F I D S+ SM+ Y +AG +
Sbjct: 352 GSVNNVLSGNSLVDMYAKCGEIVAAWRIFSGIP----DKDIFSWNSMISGYAQAGYCGKA 407
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
L +M+ V + ++ GY NG+ E A +F+ ++ G+ D +LI
Sbjct: 408 YELFCKMENYGVRRNVITWNTMISGYIRNGDDERAFELFQMMESHGVKRDTATWNILIAG 467
Query: 320 YQMAGQSQKAYTAFQNMR 337
G +A F+ M+
Sbjct: 468 SVHNGYYDRAIRIFRQMQ 485
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 90/232 (38%), Gaps = 4/232 (1%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
+ +I + +I GY + A M+ G + +T M+ Y + G+ + A E
Sbjct: 385 DKDIFSWNSMISGYAQAGYCGKAYELFCKMENYGVRRNVITWNTMISGYIRNGDDERAFE 444
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
F+ ++ G D ++ ++ V G DR + R+M A +++ ++
Sbjct: 445 LFQMMESHGVKRDTATWNILIAGSVHNGYYDRAIRIFRQMQALLRRPDYITILSIIPAFT 504
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
S + + I + D ++ LINAY +G A F +M + S
Sbjct: 505 NLVASWKVREIHACIFHHNLELDGKIANALINAYSKSGNLASACAVF-DMHSSRNIISWN 563
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
C+ L A N AL+ ++++G + T+ + G V E
Sbjct: 564 CIIL---AHVLHGSPNEALDLFCQMKQEGVVPDHTTLVTVIKAYGLTGKVSE 612
Score = 41.2 bits (95), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 5/127 (3%)
Query: 211 MVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE 270
++ YSK+GNL A F+ + + S+ +++A+V G + L +M +
Sbjct: 534 LINAYSKSGNLASACAVFD----MHSSRNIISWNCIILAHVLHGSPNEALDLFCQMKQEG 589
Query: 271 VYVGSEVYKALLRGYSMNGN-SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
V +++ Y + G SEG+Q F ITP+ A +++ +G+ ++A
Sbjct: 590 VVPDHTTLVTVIKAYGLTGKVSEGSQTFFNMANDYNITPELDHYAAMVDLLGRSGRLKEA 649
Query: 330 YTAFQNM 336
Y M
Sbjct: 650 YELIDEM 656
>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
Japonica Group]
gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
Length = 551
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 91/197 (46%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
E ++ Y + G + ++ A+N L M +G + V+ T ++ ++ G++ A
Sbjct: 349 IELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEAR 408
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E+ G +Y M+ Y++ G + E EM+ + + Y AL+ G+
Sbjct: 409 RLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGH 468
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
+NG + A R+FE ++ G P+ LI+ G+S++A+ + NM GL P D
Sbjct: 469 CVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDD 528
Query: 346 KCVALILSACEKENQLN 362
+ ++ + + + N
Sbjct: 529 ALYSALVGSLHTDKKQN 545
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/301 (20%), Positives = 114/301 (37%), Gaps = 27/301 (8%)
Query: 89 KQAISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRF--------------MKPR 134
KQA + P +T + V C S + LL R R
Sbjct: 131 KQAATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTR 190
Query: 135 RADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLL 194
D V + LK+ME+ E E + YT ++ G I E
Sbjct: 191 EKDDDRVAEMLKVMEN-------------EGIEPTVGTYTILVDGLSAARDITKVEAVFE 237
Query: 195 AMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG 254
MK + D + ++ Y +AGN++ A E F+E G ++ +YG+++ + + G
Sbjct: 238 EMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIG 297
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
++ E+L+ +M + V + V+ ++ GY + A + ++ GI D
Sbjct: 298 QMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYN 357
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
L + A + +A + M + G+ P+ ++S E + A ++ +
Sbjct: 358 TLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGN 417
Query: 375 G 375
G
Sbjct: 418 G 418
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 97/206 (47%), Gaps = 3/206 (1%)
Query: 206 VTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLRE 265
++ +V+V Y K+G + A + +E+ G ++ Y S++ AY R DR +L+
Sbjct: 144 LSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKV 203
Query: 266 MDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQ 325
M+ + + Y L+ G S + + VFE ++ ++ D + +INAY AG
Sbjct: 204 MENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGN 263
Query: 326 SQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCT 385
++A F G+EP++ +++ K Q+ A + D++ G + + T
Sbjct: 264 VRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNT 323
Query: 386 LAAWFKRLGVVE---EVEHVLREYGL 408
+ + R +V+ E++ ++ + G+
Sbjct: 324 MIDGYCRKNMVDKALEIKMIMEKMGI 349
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 102/246 (41%), Gaps = 35/246 (14%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
E N Y +I+G+ K Q++ AE + M+ RG +Q+ M+ Y + + A
Sbjct: 279 IEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKAL 338
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM------------------- 266
E ++ +G LD +Y ++ RA +D + LLR M
Sbjct: 339 EIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIH 398
Query: 267 -------DAQEVY-----VGSE----VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDA 310
+A+ ++ G+E Y ++ GY G+ A+R ++ G+ PD
Sbjct: 399 CNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDI 458
Query: 311 RMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLID 370
A L++ + + G+ A F+ M++ G +P+ ++S KE + A + +
Sbjct: 459 YSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDN 518
Query: 371 LERDGF 376
+ DG
Sbjct: 519 MLGDGL 524
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 88/233 (37%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ Y ++ L M+ G T T++V S A ++ E FEE+K
Sbjct: 181 YNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMK 240
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
D Y S++ AY RAG + R + E + Y AL+ G+ G E
Sbjct: 241 SKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQME 300
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ + +Q G+ + + +I+ Y KA M K G+E +
Sbjct: 301 AAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLA 360
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ N+++ A L + G + TL + G + E + RE
Sbjct: 361 CGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFRE 413
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E+ N YT +I + + + A M G VT VM+ Y K G+
Sbjct: 379 MIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGS 438
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ AE E++ G D SY ++V + G +D L EM + Y A
Sbjct: 439 IREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTA 498
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQ 321
L+ G + G SE A ++++ + G+TPD + + L+ +
Sbjct: 499 LISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSLH 539
>gi|410110109|gb|AFV61134.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
diamantinensis]
Length = 363
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 101/212 (47%), Gaps = 4/212 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 155 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDR 214
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ + +M++AY RAG++ + LL E+ + + + +L
Sbjct: 215 AAMLFQKLRSTGVEIDQILFQTMIVAYERAGLIAHAKRLLHELKRPD-NIPRDTAIHILA 273
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + F MR G P
Sbjct: 274 G---AGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYANVVEVFDKMRGLGYFP 330
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDG 375
+A++L+A K + ++A + ++++ G
Sbjct: 331 DSNVIAVVLNAYGKLQEFDKANDVYMEMQEVG 362
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 100/237 (42%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A M+ + D T +M+ +Y + G K A++ F
Sbjct: 55 NTTSYSTLLTMYVENKKFLEALXVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 114
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 115 WGMRKMGIEPNVVSYNTLLRVYGDAELFGESIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 174
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R G+E
Sbjct: 175 LEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSTGVEIDQILF 234
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE +V R+
Sbjct: 235 QTMIVAYERAGLIAHAKRLLHELKRPDNIPRDTAIHILAGA----GRIEEATYVFRQ 287
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 102/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + MK G + + + + ++ MY + A
Sbjct: 17 FTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEAL 76
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 77 XVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 136
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E + +F +Q I + ++ Y + +KA Q M+ G+E
Sbjct: 137 ---GDAELFGESIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIE 193
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G++ + +
Sbjct: 194 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSTGVEIDQILFQTMIVAYERAGLIAHAKRL 253
Query: 403 LRE 405
L E
Sbjct: 254 LHE 256
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 6/130 (4%)
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
YSKA ++ F +K G D +Y +M+ + +A + L+ EM V
Sbjct: 2 YSKAISI------FSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPN 55
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+ Y LL Y N A VF ++ D C ++I+ Y G +++A F
Sbjct: 56 TTSYSTLLTMYVENKKFLEALXVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFW 115
Query: 335 NMRKAGLEPS 344
MRK G+EP+
Sbjct: 116 GMRKMGIEPN 125
>gi|125554650|gb|EAZ00256.1| hypothetical protein OsI_22267 [Oryza sativa Indica Group]
Length = 602
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 9/238 (3%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ +T ++ G + + +A AM R V+ M+ Y KA A E F
Sbjct: 163 DVVSWTTMVGGLCRLGLVDDAREVFDAMPARNL----VSWNSMISGYVKADRFLDALEVF 218
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E++ LG + S ++A AG L RG + R ++ + V +++ A++ Y
Sbjct: 219 DEMRALGVEGNGFVATSALVACTGAGALGRGREIYRWVEQSGIEVDAKLATAVVDMYCKC 278
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A RVF+++ G+T +I + + G+ A F M AG+ P D +
Sbjct: 279 GCVDEAWRVFDSLPARGLT----TWNCMIGGFAVHGRCDDALELFHQMEAAGVAPDDVTL 334
Query: 349 ALILSACEKENQLNRALEFLIDL-ERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+L+AC +++ +L + R G E + F R G ++E + V+ E
Sbjct: 335 LNVLTACAHAGEVSEGRRYLNHIVSRHGIEPKGEHYGCMVDLFGRAGQLDEAKKVIDE 392
>gi|410110139|gb|AFV61149.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
salviifolia]
Length = 378
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 103/219 (47%), Gaps = 4/219 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 157 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDR 216
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ + +M++AY RAG++ + LL E+ + + + +L
Sbjct: 217 AAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDTAIHILA 275
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + F MR G P
Sbjct: 276 G---AGRIEEATYVFRQAVDAGEVKDITVFERMIHLLSKYKKYSNVXEVFDKMRGLGYFP 332
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEA 382
+A++L+A K + ++A + ++++ G + E
Sbjct: 333 DSDVIAIVLNAYGKLQEFDKANDVYMEMQEVGCVFSDEV 371
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 102/237 (43%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 57 NTTSYSTLLSMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 116
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 117 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 176
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G+E
Sbjct: 177 LEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILF 236
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE +V R+
Sbjct: 237 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGA----GRIEEATYVFRQ 289
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 6/130 (4%)
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
YSKA ++ F +K G D +Y +M+ + +A + L+ EM V
Sbjct: 4 YSKAISI------FSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPN 57
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+ Y LL Y N A VF ++ D C ++I+ Y G +++A F
Sbjct: 58 TTSYSTLLSMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFW 117
Query: 335 NMRKAGLEPS 344
MRK G+EP+
Sbjct: 118 GMRKMGIEPN 127
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 93/245 (37%), Gaps = 35/245 (14%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
+KR GF D V M+ ++ KA + A E+K G + SY +++ YV
Sbjct: 14 LKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLSMYVENKK 73
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
+ EM + + ++ Y G ++ A ++F ++ GI P+
Sbjct: 74 FLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNT 133
Query: 316 LINAY---QMAGQS--------------------------------QKAYTAFQNMRKAG 340
L+ Y ++ G++ +KA Q M+ G
Sbjct: 134 LLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRG 193
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+EP+ + I+S K +L+RA L G + + T+ ++R G+V +
Sbjct: 194 IEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAK 253
Query: 401 HVLRE 405
+L E
Sbjct: 254 RLLHE 258
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 104/224 (46%), Gaps = 5/224 (2%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I+ Y+ +I+G+ K + A N M R+ I D VT + ++ SK+G + A +
Sbjct: 364 DIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLV 423
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+++ G P R+Y S++ A + +D+ LL ++ + + Y L++G +
Sbjct: 424 DQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQS 483
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G E A++VFE + G + ++I + + G +A M G P K
Sbjct: 484 GKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTY 543
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKR 392
+I+ + K+++ + A + L ++ G + +A WF++
Sbjct: 544 EIIILSLFKKDENDMAEKLLREMIARGVRPRQ-----IAIWFQK 582
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 90/208 (43%), Gaps = 1/208 (0%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
+ N+ Y II K + A + M +G D VT + ++ + G L A +
Sbjct: 222 QPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAID 281
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
F ++ L D ++ +V A+ + G + G+ + M Q + Y +L+ GY
Sbjct: 282 LFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYC 341
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
+ A+ +F + G+ PD + +++IN + + +A F+ M + + P
Sbjct: 342 LVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVV 401
Query: 347 CVALILSACEKENQLNRALEFLIDLERD 374
+ ++ K +++ AL+ L+D D
Sbjct: 402 TYSSLIDGLSKSGRISYALQ-LVDQMHD 428
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/247 (17%), Positives = 105/247 (42%), Gaps = 7/247 (2%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ E+ + ++ + +++ + K +++ + M ++G + VT ++ Y
Sbjct: 286 MILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKE 345
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A+ F + G D +SY M+ + + D L +EM + + Y +
Sbjct: 346 VNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSS 405
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G S +G A ++ + + G+ P R +++A Q KA ++ G
Sbjct: 406 LIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKG 465
Query: 341 LEPSDKCVALILSACEKENQLNRA---LEFLI----DLERDGFMVGKEASCTLAAWFKRL 393
++P+ ++++ + +L A E L+ +L D + + + C + + L
Sbjct: 466 IQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEAL 525
Query: 394 GVVEEVE 400
++ ++E
Sbjct: 526 ALLSKME 532
>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 625
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 166/415 (40%), Gaps = 44/415 (10%)
Query: 1 MAPCDCNMLPRSYSAYQVFDEITAPKPGLRLSWRNLSL---------HRKPAKWS----- 46
+ P C++L S + +QV +++ G LSW H + W+
Sbjct: 30 LRPKICSILTAS-TLHQVLYQLSLHSQGPCLSWALFKWIESSIPNYKHSLQSSWTMIHIL 88
Query: 47 ---RSLRSGPAL-EAIKAEDMGKTQ--------VKDD----TSMFTWIQIGPNITEEQKQ 90
+ L++ +L E I D TQ + DD + +F+W+ I T+ +++
Sbjct: 89 TKFKHLKTAQSLLEKIAYRDFLSTQSVLSALVRLHDDPDINSHVFSWLVIVYANTKMKQE 148
Query: 91 AISQFPRKMTK--RCKAFVKQIICVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLM 148
AI F M R ++ S L+D++ W + K R A + ++
Sbjct: 149 AIQVFEHMMVNGFRPHLHACTVLLNSLAKDRLTDMV--WKVYKKMARIGVEANIHVYNVL 206
Query: 149 EHPLY----LQVAELALLEESFEANIRD---YTKIIHGYGKKMQIQNAENTLLAMKRRGF 201
H ++ A+ L E + D Y +I Y KK A + M+R G
Sbjct: 207 IHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEREGI 266
Query: 202 ICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEV 261
D VT ++ + K G ++ A F+EI+ + +Y +++ Y R LD+
Sbjct: 267 KPDIVTYNSLIHGFCKEGRMREAMRLFKEIR--DATPNHVTYTTLIDGYCRLNDLDQALR 324
Query: 262 LLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQ 321
L EM+AQ +Y Y ++LR G A ++ + I PD C LINAY
Sbjct: 325 LREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYC 384
Query: 322 MAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
G + A M +AGL+ ++ K +++ A E L+ + GF
Sbjct: 385 KIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGF 439
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 72/184 (39%), Gaps = 5/184 (2%)
Query: 162 LEESFEA-----NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS 216
L E EA + Y I+ + +I++A L M + D VT ++ Y
Sbjct: 325 LREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYC 384
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
K G++K A + + G LD+ +Y +++ + + +D + LL M
Sbjct: 385 KIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGFSPSYC 444
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
Y L+ GY N E ++ + G+ D + LI + Q A F M
Sbjct: 445 TYSWLVDGYCNQQNEEAVLKLPDEFVRKGLCVDKSLYRALIRRFCKREQVDYAKKIFSLM 504
Query: 337 RKAG 340
++ G
Sbjct: 505 QEKG 508
>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
Length = 792
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 99/248 (39%)
Query: 156 VAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
+ L L+ ++ ++ Y +IH K ++ A N MK G VT +++ Y
Sbjct: 381 IGLLKLVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGY 440
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
+ G + A + + E+ G P ++ +Y +++ Y++ D LL EM V G
Sbjct: 441 CEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGD 500
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
Y L+ G M + + G P +IN + AG A+ ++
Sbjct: 501 YTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQ 560
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGV 395
MRK G+ P+ + + N + A++ LI + RDG A F + G
Sbjct: 561 MRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGN 620
Query: 396 VEEVEHVL 403
+ H L
Sbjct: 621 MSRALHFL 628
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 80/205 (39%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
++ NI YT I GY + A L+ ++R G D + + K GN+
Sbjct: 563 KKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMS 622
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A + G D Y S V Y M+ M Q V +E+Y L+
Sbjct: 623 RALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLI 682
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G+S GN A ++ + + PD + L + +G A +MR+ +
Sbjct: 683 DGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVS 742
Query: 343 PSDKCVALILSACEKENQLNRALEF 367
P+ ++++AC ++ +L A +
Sbjct: 743 PNIVTYNMLINACVRDGKLQEAFQL 767
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/149 (20%), Positives = 66/149 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
LL++ ++ Y + GY + A +M ++ + D T ++ +SK GN
Sbjct: 631 LLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGN 690
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A E + E+ D +++ ++ R+G +D + LL +M +V Y
Sbjct: 691 VAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNM 750
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPD 309
L+ +G + A ++ + + +G+ PD
Sbjct: 751 LINACVRDGKLQEAFQLHDEMLSSGVVPD 779
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/213 (18%), Positives = 79/213 (37%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E F Y II+G+ K + +A M+++G + VT T + Y +
Sbjct: 526 FLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNC 585
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+A + ++ G D +Y + + + + G + R L + + VY +
Sbjct: 586 CDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNS 645
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+ GY A + + ++ + D + LI+ + G A + M
Sbjct: 646 FVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANH 705
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLER 373
+ P DK + + ++ A L D+ R
Sbjct: 706 VIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRR 738
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 50/106 (47%)
Query: 262 LLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQ 321
L EM + Y +++Y ++R G A R+F+ + AG+ PD R+ A+ I+
Sbjct: 172 LFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITISGLC 231
Query: 322 MAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
+ +A MR+AG EP + + ++ K +++ AL
Sbjct: 232 KLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVRRMDEALRL 277
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%)
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL ++ ++ A +F+ ++ G DA+M ++I A G A F M AG
Sbjct: 156 LLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAG 215
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
++P ++ A+ +S K +RAL+ L + GF
Sbjct: 216 VKPDERVYAITISGLCKLRDADRALQVLGKMREAGF 251
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 79/174 (45%), Gaps = 3/174 (1%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D V T+++ Y G + A + F+E+ G +YG ++ GM D L
Sbjct: 290 DVVLATMLMHGYCLNGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLC 349
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
R+M Q + + + +++G + + A + + + G+ PD LI+
Sbjct: 350 RQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTGV-PDVFTYGCLIHWLCKH 408
Query: 324 GQSQKAYTAFQNMRKAGLEPSDKCV-ALILSACEKENQLNRALEFLIDLERDGF 376
+ +A + M++AG++PS +L+L CEK +++ AL+ ++ GF
Sbjct: 409 QKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEK-GRMDEALKLYSEMPDKGF 461
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 62/151 (41%), Gaps = 15/151 (9%)
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE----V 277
KM E FE +L +Y S+V V+ +D LR D + G + +
Sbjct: 245 KMREAGFEPWEL--------TYSSVVDVLVKVRRMDEA---LRLKDQMLLATGKKMDVVL 293
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
L+ GY +NG A +F+ + G+TP +LI G + + Y + M
Sbjct: 294 ATMLMHGYCLNGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMI 353
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFL 368
+ GL PS L++ ++ + A+ L
Sbjct: 354 EQGLLPSTYEFNLVIKGLLRDKRWKDAIGLL 384
>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Brachypodium distachyon]
Length = 814
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 105/246 (42%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
++ + E + Y +I G K +I+ A M R+GF D ++ Y G
Sbjct: 502 TMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLG 561
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A ++K+ G D SYG+++ Y +A + + L E+ A + + +Y
Sbjct: 562 KMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYN 621
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
AL+ GY NGN GA V + ++ GI P L++ AG +A T F+ RK
Sbjct: 622 ALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKN 681
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEV 399
+E +++ K +++ A+ + ++ K TL + + G EE
Sbjct: 682 SIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEA 741
Query: 400 EHVLRE 405
+ E
Sbjct: 742 SKLFDE 747
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 99/219 (45%), Gaps = 3/219 (1%)
Query: 148 MEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVT 207
ME L+L + ++ + E + ++ Y II GY K IQ A L + G + V
Sbjct: 563 MEEALHL-LGQMKI--EGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVI 619
Query: 208 LTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMD 267
++ Y + GN+ A + ++ +G +Y S++ AG++D + + +
Sbjct: 620 YNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSR 679
Query: 268 AQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQ 327
+ VG Y +++G G + A FE ++ I P+ L+ AY +G ++
Sbjct: 680 KNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNE 739
Query: 328 KAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALE 366
+A F M +G+ P + +++ + + L++A+E
Sbjct: 740 EASKLFDEMVSSGIVPDNVSYNTLVTGFSQVDSLDKAIE 778
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 98/277 (35%), Gaps = 35/277 (12%)
Query: 129 RFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQN 188
R MKP A A KQL L +LE+ NI +IHG + ++
Sbjct: 436 RGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKG 495
Query: 189 AENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVM 248
A L M +G D +T +M+ K ++ A + +++ G D + S++
Sbjct: 496 ATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIH 555
Query: 249 AYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITP 308
AY G ++ LL +M + V Y ++ GY + + A + G+ P
Sbjct: 556 AYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKP 615
Query: 309 DARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFL 368
+A + LI Y G A M G++P++
Sbjct: 616 NAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNV---------------------- 653
Query: 369 IDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
C+L W G+V+E + + +
Sbjct: 654 -------------TYCSLMHWMCHAGLVDEAKTMFEQ 677
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 108/280 (38%), Gaps = 35/280 (12%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG- 219
LLE+ F AN +IHG + + A L M RG + D ++ +++ K G
Sbjct: 433 LLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGK 492
Query: 220 ---NLKMAEET-------------------------------FEEIKLLGEPLDKRSYGS 245
K+ EE + E K G D +YG
Sbjct: 493 VEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGI 552
Query: 246 MVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAG 305
M+ Y +A ++ GE L +EM ++ + VY L+R Y NGN A R+ + ++ G
Sbjct: 553 MIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRG 612
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
I + + LI+ G A MRK GL P+ C ++ K Q+++
Sbjct: 613 IPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVD 672
Query: 366 EFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
L ++ + K + +LG ++ +L E
Sbjct: 673 SILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNE 712
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 103/238 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + ++ Y ++HG +I+ A K+ G D T +M+ Y KA
Sbjct: 503 MVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANR 562
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ E+ F+E+ + + YG+++ AY G + L +M ++ + S Y +
Sbjct: 563 VEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSS 622
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G S G + A ++ + ++ G++P+ LI Y GQ K + Q M
Sbjct: 623 LIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINN 682
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
+ P+ ++++ K + A + L ++ + G + L F + G +EE
Sbjct: 683 VHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEE 740
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 91/225 (40%), Gaps = 3/225 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I GY K +++ E M + V ++ Y + GN++ A ++++
Sbjct: 550 YGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMR 609
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G P +Y S++ G++D LL EM + + Y AL+ GY G
Sbjct: 610 SRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMH 669
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
+ + + + P+ ++IN + G + A M + G+ P +
Sbjct: 670 KVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALT 729
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCT--LAAWFKRLGV 395
+ KE ++ AL+ + DL G + + + T + W K L V
Sbjct: 730 NGFCKEGKMEEALK-VCDLMSTGGISLDDITYTTLIDGWHKPLTV 773
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 75/179 (41%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E N Y +I Y + ++ A M+ RG T + ++ S G + A +
Sbjct: 579 EQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQ 638
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
+E++ G + Y +++ Y + G + + + +L+EM V+ Y ++ G+
Sbjct: 639 LLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHC 698
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
GN + A ++ + GI PDA L N + G+ ++A M G+ D
Sbjct: 699 KLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDD 757
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 103/248 (41%), Gaps = 2/248 (0%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
+ +L +F+ N T ++ G + + A + +GF + VT ++ +A
Sbjct: 396 MEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEA 455
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
G+ + A + +E+ G LD SY ++++A + G ++ G L EM + + Y
Sbjct: 456 GSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTY 515
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
LL G G E A ++ + G PDA ++I+ Y A + ++ FQ M
Sbjct: 516 NMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVT 575
Query: 339 AGLEPSDKCVALILSA-CEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
+E + ++ A CE N + A D+ G +L +G+V+
Sbjct: 576 MKIEQNAVVYGTLIRAYCENGN-MREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVD 634
Query: 398 EVEHVLRE 405
+L E
Sbjct: 635 SANQLLDE 642
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/268 (19%), Positives = 100/268 (37%), Gaps = 35/268 (13%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
++ +++ + ++ +A M++ G + VT ++ K G L A + E+++
Sbjct: 200 FSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKME 259
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+YG ++ V+ D +L+EM + + VY L+ GY GN
Sbjct: 260 KERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNIS 319
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG------------ 340
A ++ + + GI+P++ C LI Y + Q + A + M G
Sbjct: 320 TALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVI 379
Query: 341 -----------------------LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
+P+D + L++S + + + A+E L GF
Sbjct: 380 HRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFA 439
Query: 378 VGKEASCTLAAWFKRLGVVEEVEHVLRE 405
S L G EE +L+E
Sbjct: 440 ANTVTSNALIHGLCEAGSKEEAAKLLKE 467
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/256 (19%), Positives = 96/256 (37%), Gaps = 5/256 (1%)
Query: 153 YLQVAELALLEESFEANIRDYTKIIHGYG---KKMQIQNAENTLLAMKRRGFICDQVTLT 209
+ A L E + + D +IH Y K + + +G T
Sbjct: 109 FFHFASETLFEPAVAVTVVDL--LIHVYSTQFKHLGFGVVFELFSLLANKGLFPSLKTCN 166
Query: 210 VMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQ 269
++ KA +KM+ + F+ + G D + +MV A+ G +D L R+M+
Sbjct: 167 FLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKV 226
Query: 270 EVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
V Y ++ G NG + A + E ++ + P +LIN + +A
Sbjct: 227 GVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEA 286
Query: 330 YTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAW 389
+ M G P++ ++ + ++ AL+ D+ +G +L
Sbjct: 287 NCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQG 346
Query: 390 FKRLGVVEEVEHVLRE 405
+ + +E EH+L E
Sbjct: 347 YCKSNQMEHAEHLLEE 362
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 55/123 (44%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+E N+ YT +I GY K Q+ ++ L M +++T T+M+ + K GN+K
Sbjct: 645 KEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMK 704
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A + E+ G D +Y ++ + + G ++ + M + + Y L+
Sbjct: 705 AAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLI 764
Query: 283 RGY 285
G+
Sbjct: 765 DGW 767
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 84/226 (37%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I GY + I A M G + VT ++ Y K+ ++ AE EE+
Sbjct: 305 YNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEML 364
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G +++ ++ S++ D + + EM + + L+ G NG
Sbjct: 365 TGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQS 424
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A ++ + G + LI+ AG ++A + M + GL ++
Sbjct: 425 EAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLI 484
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
AC KE ++ + ++ R G L +G +EE
Sbjct: 485 LACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEE 530
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 44/237 (18%), Positives = 96/237 (40%), Gaps = 2/237 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+E + ++ Y +I+G K + A L M RG+ + V ++ Y + GN+
Sbjct: 260 KERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNIS 319
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A + +++ G + + S++ Y ++ ++ E LL EM + + +++
Sbjct: 320 TALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVI 379
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
+ + A + P+ + LL++ G+ +A + + + G
Sbjct: 380 HRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFA 439
Query: 343 PSD-KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
+ ALI CE ++ A + L ++ G ++ + TL + G VEE
Sbjct: 440 ANTVTSNALIHGLCEAGSK-EEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEE 495
>gi|115483719|ref|NP_001065521.1| Os11g0103000 [Oryza sativa Japonica Group]
gi|77548314|gb|ABA91111.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113644225|dbj|BAF27366.1| Os11g0103000 [Oryza sativa Japonica Group]
Length = 543
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 88/188 (46%), Gaps = 8/188 (4%)
Query: 158 ELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFIC-----DQVTLTVMV 212
E+ LL +++ N R YT ++ GY ++++ L AM+R G D VT T ++
Sbjct: 185 EVPLLPKAYPPNSRVYTTLMKGYMNAGRVEDVVAMLRAMRREGETSPASRPDHVTYTTVI 244
Query: 213 VMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY 272
AG+++ A EE+ G + +Y ++ Y + + + LL +D E
Sbjct: 245 STLVAAGDMERARAVLEEMGQAGVAASRVTYNVLIKGYCQQLQAGKAKELL-AVDMAEAG 303
Query: 273 VGSEV--YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAY 330
+ +V Y L+ G + +S GA +F ++ GI P A L+ A+ +GQ + A+
Sbjct: 304 IQPDVVTYNTLIDGCVLTDDSAGAVALFNEMRERGIAPSAVSYTTLMKAFAASGQPKLAH 363
Query: 331 TAFQNMRK 338
F M K
Sbjct: 364 KVFDEMEK 371
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 84/187 (44%), Gaps = 7/187 (3%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+ E + ++ Y +I G A M+ RG V+ T ++ ++ +G
Sbjct: 299 MAEAGIQPDVVTYNTLIDGCVLTDDSAGAVALFNEMRERGIAPSAVSYTTLMKAFAASGQ 358
Query: 221 LKMAEETFEEIKLLGEP---LDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
K+A + F+E++ +P +D+ ++ +V AY R G+L+ + ++ M A+ V
Sbjct: 359 PKLAHKVFDEME--KDPRVAVDRAAWNMLVEAYCRLGLLESAKKVVERMKARGVQPDVAT 416
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y +L +G ++ A ++E I+ + D + L + A +KA M
Sbjct: 417 YGSLAKGIAVARRPGEALLLWEEIKEKEV--DGEVVEALADVCVRAALFRKALEMVARME 474
Query: 338 KAGLEPS 344
+ G+EP+
Sbjct: 475 EMGVEPN 481
>gi|302768008|ref|XP_002967424.1| hypothetical protein SELMODRAFT_231012 [Selaginella moellendorffii]
gi|300165415|gb|EFJ32023.1| hypothetical protein SELMODRAFT_231012 [Selaginella moellendorffii]
Length = 546
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 107/237 (45%), Gaps = 4/237 (1%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E N+ Y I+ +G +Q + A + M++RG + VT + ++ +Y K G A
Sbjct: 269 EPNVITYNTILFLHGLTLQHEKAMRLVRKMQQRGIEPNAVTYSTLISIYGKTGKYDRAAF 328
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
F+ ++ G +D+ Y SM++ Y RAG++ + LL E+ ++ L +
Sbjct: 329 LFKTLREKGFEMDEILYQSMIVVYERAGLVAHAKRLLEELKQPDIVPRDTAISILAKAEK 388
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
+ E A +++ AG ++ +I + +S+ A F+NMR++G P +
Sbjct: 389 L----EEAAKLYWRSHEAGEIKESVTYKSMIQLFMRNKRSKNAIDVFENMRESGFLPDSE 444
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
++L+A + QL A + +D+ G + KE + + + E E +
Sbjct: 445 TTVVLLAAYGQLRQLEDAEKLYLDMRERGCTLEKEVHFQMLKLYGDARKIREAEDMF 501
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 108/236 (45%), Gaps = 4/236 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+ YGK + A+ L MK G + D V+ T+++ Y+++ A++ F E+K
Sbjct: 133 YNSMINLYGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLEAKQVFLEMK 192
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV--YKALLRGYSMNGN 290
G LD + M+ Y + M+ E L M ++ + + V Y +++ Y
Sbjct: 193 TKGIQLDVTTCNMMIDVYGKLEMVRDAEELFWSM-SKTLGIQQNVVTYNTMIKVYKEAEL 251
Query: 291 SEGAQRVFEAIQF-AGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
A VF +Q G+ P+ ++ + + Q +KA + M++ G+EP+ +
Sbjct: 252 LSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQHEKAMRLVRKMQQRGIEPNAVTYS 311
Query: 350 LILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++S K + +RA L GF + + ++ ++R G+V + +L E
Sbjct: 312 TLISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQSMIVVYERAGLVAHAKRLLEE 367
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 90/203 (44%), Gaps = 2/203 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEI- 231
YT +I+ Y + + A+ L MK +G D T +M+ +Y K ++ AEE F +
Sbjct: 168 YTILINAYAESQKYLEAKQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAEELFWSMS 227
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRG-EVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
K LG + +Y +M+ Y A +L V + V Y +L + +
Sbjct: 228 KTLGIQQNVVTYNTMIKVYKEAELLSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQ 287
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
E A R+ +Q GI P+A + LI+ Y G+ +A F+ +R+ G E +
Sbjct: 288 HEKAMRLVRKMQQRGIEPNAVTYSTLISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQS 347
Query: 351 ILSACEKENQLNRALEFLIDLER 373
++ E+ + A L +L++
Sbjct: 348 MIVVYERAGLVAHAKRLLEELKQ 370
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 111/249 (44%), Gaps = 7/249 (2%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+ E N Y+ +I YGK + A ++ +GF D++ M+V+Y +AG +
Sbjct: 300 QRGIEPNAVTYSTLISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQSMIVVYERAGLVA 359
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL-REMDAQEVYVGSEVYKAL 281
A+ EE+K +P D + + +A L+ L R +A E+ S YK++
Sbjct: 360 HAKRLLEELK---QP-DIVPRDTAISILAKAEKLEEAAKLYWRSHEAGEI-KESVTYKSM 414
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
++ + N S+ A VFE ++ +G PD+ +L+ AY Q + A + +MR+ G
Sbjct: 415 IQLFMRNKRSKNAIDVFENMRESGFLPDSETTVVLLAAYGQLRQLEDAEKLYLDMRERGC 474
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEH 401
+ +L ++ A + L+ +G + G E T+ ++R + E
Sbjct: 475 TLEKEVHFQMLKLYGDARKIREAEDMFAALKLEG-LDGDELYLTMIRIYERASKLNEASR 533
Query: 402 VLREYGLRE 410
+ E R+
Sbjct: 534 LFSEMKSRQ 542
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 86/221 (38%), Gaps = 47/221 (21%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
L L++ E L+ + F ++ +I GYG+ ++++A L M+ G D V + +
Sbjct: 47 LVLEMVEKDLVPDKF-----TFSTLISGYGRANRLEDAMGWLQEMEAGGIKPDLVIFSTL 101
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ + K + A F ++K G DK Y SM+ Y +A + LL EM
Sbjct: 102 IELAGKVKDYSKATSLFSKLKASGIAPDKVIYNSMINLYGKAKFYKEAQGLLAEMKE--- 158
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
AG+ PD +LINAY +SQK
Sbjct: 159 --------------------------------AGLMPDTVSYTILINAY---AESQKYLE 183
Query: 332 AFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLE 372
A ++ LE K + L ++ C + LE + D E
Sbjct: 184 A----KQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAE 220
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 74/165 (44%)
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
DK ++ +++ Y RA L+ L+EM+A + ++ L+ + A +F
Sbjct: 59 DKFTFSTLISGYGRANRLEDAMGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLF 118
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
++ +GI PD + +IN Y A ++A M++AGL P ++++A +
Sbjct: 119 SKLKASGIAPDKVIYNSMINLYGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAES 178
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+ A + ++++ G + + + +L +V + E +
Sbjct: 179 QKYLEAKQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAEELF 223
>gi|302819880|ref|XP_002991609.1| hypothetical protein SELMODRAFT_133813 [Selaginella moellendorffii]
gi|300140642|gb|EFJ07363.1| hypothetical protein SELMODRAFT_133813 [Selaginella moellendorffii]
Length = 356
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 103/229 (44%), Gaps = 2/229 (0%)
Query: 170 IRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFE 229
+R Y +I Y + + ++A + M G D+VT ++V K G + F
Sbjct: 30 LRPYNAMIAAYYQAKRPKDAWDVYHQMLAEGIDPDEVTYDILVSGSGKNG--YPIDRLFL 87
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
EIK G L RSY ++ A+ + G +D+ E ++REM QE+ + AL+ Y+M+
Sbjct: 88 EIKSRGVALTLRSYNVVICAFTKEGSIDKVEEVIREMIRQELRPDLFSFNALIAAYAMSR 147
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
E +VF ++ AG+ PD LI + + ++A F+ M +P +
Sbjct: 148 KPERGLQVFSNMKAAGVLPDIVTYTTLIQMFSRSSMHKEAIEMFEEMVVNKCQPDFFVYS 207
Query: 350 LILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
L++S K + AL L+ +G +L + G++EE
Sbjct: 208 LLVSVYGKAGLVADALLIFHRLQLEGHRPNIVTYTSLISAHLHKGLLEE 256
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 91/228 (39%), Gaps = 18/228 (7%)
Query: 115 PETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYT 174
P+ + + L+AA+ KP R L V +K +I YT
Sbjct: 131 PDLFSFNALIAAYAMSRKPERG--LQVFSNMK----------------AAGVLPDIVTYT 172
Query: 175 KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLL 234
+I + + + A M D +++V +Y KAG + A F ++L
Sbjct: 173 TLIQMFSRSSMHKEAIEMFEEMVVNKCQPDFFVYSLLVSVYGKAGLVADALLIFHRLQLE 232
Query: 235 GEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGA 294
G + +Y S++ A++ G+L+ +M+A + ++ Y+ G A
Sbjct: 233 GHRPNIVTYTSLISAHLHKGLLEESRKHFSQMEAYGCRADVHLLNTMIDAYAKAGMVNDA 292
Query: 295 QRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
+ + G+ P+ A+++ + AG ++A A+ +M AG +
Sbjct: 293 ANLLHRLTAQGVCPNRASYAIIVEGFLHAGHVEEALAAYASMSGAGFK 340
>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
Length = 792
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 98/248 (39%), Gaps = 3/248 (1%)
Query: 159 LALLEESFEANIRD---YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
+ LLE + + D Y +IH K ++ A N MK G VT +++ Y
Sbjct: 381 IGLLELVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGY 440
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
+ G + A + + E+ G P ++ +Y +++ Y++ D LL EM V G
Sbjct: 441 CEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGD 500
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
Y L+ G M + + G P +IN + AG A+ ++
Sbjct: 501 YTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQ 560
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGV 395
MRK G+ P+ + + N + A++ LI + RDG A F + G
Sbjct: 561 MRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGN 620
Query: 396 VEEVEHVL 403
+ H L
Sbjct: 621 MSRALHFL 628
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 80/205 (39%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
++ NI YT I GY + A L+ ++R G D + + K GN+
Sbjct: 563 KKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMS 622
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A + G D Y S V Y M+ M Q V +E+Y L+
Sbjct: 623 RALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLI 682
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G+S GN A ++ + + PD + L + +G A +MR+ +
Sbjct: 683 DGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVS 742
Query: 343 PSDKCVALILSACEKENQLNRALEF 367
P+ ++++AC ++ +L A +
Sbjct: 743 PNIVTYNMLINACVRDGKLQEAFQL 767
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/149 (20%), Positives = 66/149 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
LL++ ++ Y + GY + A +M ++ + D T ++ +SK GN
Sbjct: 631 LLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGN 690
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A E + E+ D +++ ++ R+G +D + LL +M +V Y
Sbjct: 691 VAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNM 750
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPD 309
L+ +G + A ++ + + +G+ PD
Sbjct: 751 LINACVRDGKLQEAFQLHDEMLSSGVVPD 779
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 57/129 (44%)
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
D +S +++ R L EM + Y +++Y ++R G A R+F
Sbjct: 149 DAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAVRLF 208
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
+ + AG+ PD R+ A+ I+ + +A MR+AG EP + + ++ K
Sbjct: 209 DEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKV 268
Query: 359 NQLNRALEF 367
+++ AL
Sbjct: 269 GRMDEALRL 277
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/213 (18%), Positives = 79/213 (37%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E F Y II+G+ K + +A M+++G + VT T + Y +
Sbjct: 526 FLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNC 585
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+A + ++ G D +Y + + + + G + R L + + VY +
Sbjct: 586 CDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNS 645
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+ GY A + + ++ + D + LI+ + G A + M
Sbjct: 646 FVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANH 705
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLER 373
+ P DK + + ++ A L D+ R
Sbjct: 706 VIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRR 738
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 80/174 (45%), Gaps = 3/174 (1%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D V T+++ Y G + A + F+E+ G +YG ++ GM D L
Sbjct: 290 DVVLATMLMHGYCLHGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMSDETYKLC 349
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
R+M Q + + + + +++G + + A + E + G+ PD LI+
Sbjct: 350 RQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIGLLELVVDTGV-PDVFTYGCLIHWLCKH 408
Query: 324 GQSQKAYTAFQNMRKAGLEPSDKCV-ALILSACEKENQLNRALEFLIDLERDGF 376
+ +A + M++AG++PS +L+L CEK +++ AL+ ++ GF
Sbjct: 409 QKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEK-GRMDEALKLYSEMPDKGF 461
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 40/199 (20%), Positives = 74/199 (37%), Gaps = 36/199 (18%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M RG + D + T ++V ++ + A F+E++ G D + Y ++ A VR GM
Sbjct: 141 MVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGM 200
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITP------- 308
L EM V VY + G +++ A +V ++ AG P
Sbjct: 201 HCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSS 260
Query: 309 -----------------------------DARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
D + +L++ Y + G+ KA F +
Sbjct: 261 VVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEVVSD 320
Query: 340 GLEPSDKCVALILSACEKE 358
G+ P++ +++ C+ E
Sbjct: 321 GVTPTNVTYGVLIKGCDAE 339
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 45/96 (46%)
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL + ++ A +F+ ++ G DA+M ++I A G A F M AG
Sbjct: 156 LLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAG 215
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
++P ++ A+ +S K +RAL+ L + GF
Sbjct: 216 VKPDERVYAITISGLCKLRDADRALQVLGKMREAGF 251
>gi|255660892|gb|ACU25615.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 481
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 112/243 (46%), Gaps = 6/243 (2%)
Query: 141 VLKQLKLMEHPL-YLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR 199
VL K EH L + E + L FE N + KII G+ ++ +A LL M ++
Sbjct: 18 VLHSSKTSEHALQFFXWVERSNL---FEHNRETHLKIIEILGRASKLNHARCILLDMPKK 74
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G D+ +M+ Y K G ++ + + F++++ LG +SY ++ +R G
Sbjct: 75 GLEWDEDMWVMMIDSYGKQGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMA 134
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+ +M ++ + + ++ G+ ++G E A R FE ++ I+PD +IN
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMING 194
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
Y + ++A F M+ +EP+ ++ +Q++ AL + +++ GF +
Sbjct: 195 YYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK--GFGIK 252
Query: 380 KEA 382
A
Sbjct: 253 PNA 255
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 8/202 (3%)
Query: 163 EESFEANIRDYT---KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
E E I+ Y K+I G+ M + N +L+ G + T VM+ + +G
Sbjct: 108 ELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLS---EGIEPTRHTFNVMIWGFFLSG 164
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A FE++K D +Y +M+ Y R ++ E EM + + Y
Sbjct: 165 KVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYT 224
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L++GY + A R+ E ++ GI P+A + L+ A + +A + M
Sbjct: 225 TLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVXLKEMMDK 284
Query: 340 GLEPSDKCV--ALILSACEKEN 359
L P+D + LI S C+ N
Sbjct: 285 YLAPTDNSIFMRLISSHCKSGN 306
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 113/259 (43%), Gaps = 4/259 (1%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+LE+ +IR Y+ IIH K + + A L + G + D ++ + K G
Sbjct: 616 CMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEG 675
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+++ A + ++E+ G + Y +++ + G + + L E++ +++ Y
Sbjct: 676 DIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYS 735
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
++ GY +GN A ++F+ + GI+PD + +LI+ G +KA + F ++
Sbjct: 736 TIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQK 795
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEV 399
+ +LI S C K ++ A E D+ L + + ++EE
Sbjct: 796 SVGSLSAFNSLIDSFC-KHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEA 854
Query: 400 EHVLREYGLRETYSKIPGS 418
E + + ET + IP +
Sbjct: 855 EQLFLD---METRNIIPNT 870
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 89/218 (40%), Gaps = 3/218 (1%)
Query: 154 LQVAEL---ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTV 210
+QVAE +L N YT +I G+ A +T M +G I D +
Sbjct: 572 IQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSA 631
Query: 211 MVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE 270
++ SK G K A F + G D Y S++ + + G +++ L EM
Sbjct: 632 IIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNG 691
Query: 271 VYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAY 330
+ VY L+ G G A+ +F+ I+ + PD + +I+ Y +G +A+
Sbjct: 692 INPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAF 751
Query: 331 TAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFL 368
F M G+ P +++ C KE L +AL
Sbjct: 752 KLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLF 789
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 102/233 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I G +Q A L M R G + ++ Y + +MA E + +
Sbjct: 454 YSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMI 513
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D Y +++ RA ++ ++LL +M + + + Y A + YS +G +
Sbjct: 514 ANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQ 573
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+R F+ + +GI P+ + +LI + G + +A + F+ M + GL P + + I+
Sbjct: 574 VAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAII 633
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ K + A+ + + G + +L + F + G +E+ + E
Sbjct: 634 HSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDE 686
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 120/295 (40%), Gaps = 39/295 (13%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E+ ++ Y+ II GY K + A M +G D +++ K GNL+
Sbjct: 724 EKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLE 783
Query: 223 MAEETFEEIK----------------------------LLGEPLDKR------SYGSMVM 248
A F E + L + +DK+ +Y ++
Sbjct: 784 KALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILID 843
Query: 249 AYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITP 308
AY +A M++ E L +M+ + + + Y +LL Y+ GN +F+ ++ GI
Sbjct: 844 AYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIAC 903
Query: 309 DARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV-ALILSACEKENQLNRALEF 367
DA ++ +AY G+S +A G++ D ALI C KE Q++ LE
Sbjct: 904 DAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLC-KEKQISTVLEL 962
Query: 368 LIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRETYSKIPGSRSIA 422
L ++ ++ + + TL F + G +E VL G+ + +P S S+
Sbjct: 963 LSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVL---GVMQRLGWVPTSLSLT 1014
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 99/234 (42%), Gaps = 2/234 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I G+ K+ I+ A M RG + VT M+ +KAG + A F E+
Sbjct: 349 YTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEML 408
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ G D +Y ++ Y+++ + + LL EM A+++ Y L+ G + + +
Sbjct: 409 MAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQ 468
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV-ALI 351
A V + + G+ P+ M LI AY + + A + M G+ P C LI
Sbjct: 469 KANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLI 528
Query: 352 LSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ C + ++ A L+D+ G + + G ++ E ++
Sbjct: 529 IGLC-RAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKD 581
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 97/243 (39%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E+ + N Y I+ Y K +IQ AE M G + + V T+++ + GN
Sbjct: 549 EKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTV 608
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A TF+ + G D R+Y +++ + + G + + V +Y +L+
Sbjct: 609 EALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLI 668
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G+ G+ E A ++++ + GI P+ + LIN G+ KA F + + L
Sbjct: 669 SGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLV 728
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P + I+ K L A + ++ G C L + G +E+ +
Sbjct: 729 PDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSL 788
Query: 403 LRE 405
E
Sbjct: 789 FHE 791
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 98/226 (43%), Gaps = 5/226 (2%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
L+ +E+ + N+ Y I G + + A M +G D T T++V + K
Sbjct: 265 LSEMEKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQ 324
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
K A+ FE + G ++ +Y +++ +++ G ++ + EM + + + Y
Sbjct: 325 KRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTY 384
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
A++ G + G A +F + AG+ PD LLI+ Y + KA M+
Sbjct: 385 NAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKA 444
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG-----FMVG 379
L PS ++++S + L +A E L + R+G FM G
Sbjct: 445 RKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYG 490
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/245 (19%), Positives = 106/245 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + N+ Y +I Y ++ + + A L M G + D +++ +A
Sbjct: 477 MIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKK 536
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ A+ ++ G + +YG+ + Y ++G + E ++M + + + +Y
Sbjct: 537 VEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTI 596
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L++G+ GN+ A F+ + G+ PD R + +I++ G++++A F K G
Sbjct: 597 LIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTG 656
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+ P ++S KE + +A + ++ +G TL +LG V +
Sbjct: 657 VVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKAR 716
Query: 401 HVLRE 405
+ E
Sbjct: 717 ELFDE 721
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 80/185 (43%), Gaps = 35/185 (18%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++++ NI YT +I YGK ++ AE L M+ R I + +T T +++ Y++ GN
Sbjct: 826 MVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGN 885
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG-------MLDRGEV------------ 261
F++++ G D +YG M AY + G +L++ V
Sbjct: 886 RFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDA 945
Query: 262 ----------------LLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAG 305
LL EM +E+ + S+ LL G+ +GN + A +V +Q G
Sbjct: 946 LIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLG 1005
Query: 306 ITPDA 310
P +
Sbjct: 1006 WVPTS 1010
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 114/254 (44%), Gaps = 1/254 (0%)
Query: 154 LQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVV 213
L+V +L ++E+ + YT ++ G+ K+ + + A+ +M G ++ T T ++
Sbjct: 296 LEVKKL-MMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALID 354
Query: 214 MYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYV 273
+ K GN++ A +E+ G L+ +Y +M+ +AG + + L EM +
Sbjct: 355 GFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEP 414
Query: 274 GSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAF 333
+ Y L+ GY + + A + ++ +TP ++LI+ + QKA
Sbjct: 415 DTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVL 474
Query: 334 QNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRL 393
M + G++P+ ++ A +E++ A+E L + +G + L R
Sbjct: 475 DQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRA 534
Query: 394 GVVEEVEHVLREYG 407
VEE + +L + G
Sbjct: 535 KKVEEAKMLLVDMG 548
>gi|87162841|gb|ABD28636.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1053
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 101/243 (41%), Gaps = 30/243 (12%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E+ + YT +I G+ K ++ + L M + G I ++VT T ++ Y K G
Sbjct: 242 MVEKGICHDFVSYTILIDGFSKLGDVEKSFTFLAKMIKEGIIPNKVTYTAIMSAYCKKGR 301
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMD------------- 267
++ A F +K +G LD+ + ++ + R G DR LL EM+
Sbjct: 302 IEEAFGLFVRMKDMGIELDEFVFVVLIDGFGRVGDFDRVFQLLVEMEKRGIGPNVVTYNA 361
Query: 268 -----------------AQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDA 310
++ V Y LL GY+ N G + + ++ AGI+ D
Sbjct: 362 VVNGLSKYGRTQEADEFSKNVTADVVTYSTLLHGYTEEDNVLGILQTKKRLEEAGISMDV 421
Query: 311 RMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLID 370
MC +LI A M + Y ++ M + L P+ ++ K ++N ALE D
Sbjct: 422 VMCNVLIRALFMMQAYEDVYALYKGMPEMDLVPNSITYCTMIDGYCKVGKINEALEVFDD 481
Query: 371 LER 373
+
Sbjct: 482 FRK 484
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 77/171 (45%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
NI Y II+G + A ++++ + ++T ++ + G L+ AE F
Sbjct: 731 NIVIYNSIINGLCHDGCLIEAFRLFDSLEKLNLMTSEITYATLIYALCREGYLQDAEHVF 790
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+++ L G + Y S+++A + G L++ LL +M+ Q + + +++ Y
Sbjct: 791 KKMVLNGFQPKTQVYNSLLVATSKIGQLEKAFELLNDMEKQYIKFDNFTVSSVINCYCQK 850
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
G+ EGA + + I+PD +I G+ ++ + + M ++
Sbjct: 851 GDMEGALEFYYKFKGKDISPDFLGFLYMIRGLCTKGRMEETRSVLREMLQS 901
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 73/170 (42%)
Query: 206 VTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLRE 265
VT T +V K G + +++ G LD Y V YV +L +RE
Sbjct: 182 VTYTAVVNALCKLGRVDEVCGLVRKMEEDGLDLDVVLYSVWVCGYVEEKVLVEVFRKMRE 241
Query: 266 MDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQ 325
M + + Y L+ G+S G+ E + + GI P+ +++AY G+
Sbjct: 242 MVEKGICHDFVSYTILIDGFSKLGDVEKSFTFLAKMIKEGIIPNKVTYTAIMSAYCKKGR 301
Query: 326 SQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
++A+ F M+ G+E + +++ + +R + L+++E+ G
Sbjct: 302 IEEAFGLFVRMKDMGIELDEFVFVVLIDGFGRVGDFDRVFQLLVEMEKRG 351
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 70/172 (40%)
Query: 172 DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEI 231
DY +IHG K + A + ++++G + V ++ G L A F+ +
Sbjct: 699 DYGVVIHGLCKGGYLNKALDLCTLIEKKGVNLNIVIYNSIINGLCHDGCLIEAFRLFDSL 758
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
+ L + +Y +++ A R G L E + ++M ++VY +LL S G
Sbjct: 759 EKLNLMTSEITYATLIYALCREGYLQDAEHVFKKMVLNGFQPKTQVYNSLLVATSKIGQL 818
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
E A + ++ I D + +IN Y G + A + + + P
Sbjct: 819 EKAFELLNDMEKQYIKFDNFTVSSVINCYCQKGDMEGALEFYYKFKGKDISP 870
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 84/215 (39%), Gaps = 21/215 (9%)
Query: 205 QVTLTVMVVMYS-------KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLD 257
Q L VM V Y K G L A + I+ G L+ Y S++ G L
Sbjct: 690 QDDLPVMYVDYGVVIHGLCKGGYLNKALDLCTLIEKKGVNLNIVIYNSIINGLCHDGCLI 749
Query: 258 RGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
L ++ + Y L+ G + A+ VF+ + G P ++ L+
Sbjct: 750 EAFRLFDSLEKLNLMTSEITYATLIYALCREGYLQDAEHVFKKMVLNGFQPKTQVYNSLL 809
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLI-----DLE 372
A GQ +KA+ +M K ++ + V+ +++ ++ + ALEF D+
Sbjct: 810 VATSKIGQLEKAFELLNDMEKQYIKFDNFTVSSVINCYCQKGDMEGALEFYYKFKGKDIS 869
Query: 373 RD--GFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
D GF+ CT G +EE VLRE
Sbjct: 870 PDFLGFLYMIRGLCT-------KGRMEETRSVLRE 897
>gi|410110099|gb|AFV61129.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
trifolia]
Length = 440
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 101/224 (45%), Gaps = 12/224 (5%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 219 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDR 278
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ + +M++AY RAG++ + LL E+ + + + +L
Sbjct: 279 AAMLFQKLRSSGXEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDTAIHILA 337
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + F MR G P
Sbjct: 338 G---AGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFP 394
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLA 387
+A +L+A K + ++A D +M +E C +
Sbjct: 395 DSDVIAXVLNAYGKLQEFDKA--------NDVYMEMQEVGCVFS 430
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 101/237 (42%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 119 NTASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 178
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 179 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 238
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G E
Sbjct: 239 LEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILF 298
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE +V R+
Sbjct: 299 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAG----AGRIEEATYVFRQ 351
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 102/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + MK G + + + + ++ MY + A
Sbjct: 81 FTPDLVAYNAMINVFGKAKLFREARSLIGEMKXAGVMPNTASYSTLLTMYVENKKFLEAL 140
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 141 SVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 200
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + ++ Y + +KA Q M+ G+E
Sbjct: 201 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIE 257
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 258 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQTMIVAYERAGLVAHAKRL 317
Query: 403 LRE 405
L E
Sbjct: 318 LHE 320
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ A + L M++ D V + ++ + K + A F +K
Sbjct: 18 YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKXCDYSKAISIFSRLK 77
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +M+ + +A + L+ EM V + Y LL Y N
Sbjct: 78 RSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKXAGVMPNTASYSTLLTMYVENKKFL 137
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF ++ D C ++I+ Y G +++A F MRK G+EP+
Sbjct: 138 EALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 189
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/183 (18%), Positives = 81/183 (44%), Gaps = 2/183 (1%)
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
F+E++ D+ +Y +++ + + G+ D L++M+ V +Y L+
Sbjct: 3 FDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRK 62
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
+ A +F ++ +G TPD +IN + A ++A + M+ AG+ P+
Sbjct: 63 XCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKXAGVMPNTAS 122
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYG 407
+ +L+ + + AL ++ ++ + + +LG+ +E + + +G
Sbjct: 123 YSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF--WG 180
Query: 408 LRE 410
+R+
Sbjct: 181 MRK 183
>gi|297819626|ref|XP_002877696.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323534|gb|EFH53955.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1188
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 94/197 (47%), Gaps = 2/197 (1%)
Query: 208 LTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMD 267
V++ ++ A +K A E +E+ G D+ +G ++ A + G + + +M
Sbjct: 173 FVVLIRRFASANMVKKAVEVLDEMPKYGFEPDEYVFGCLLDALCKNGSVKDASKVFEDM- 231
Query: 268 AQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQ 327
+++ + +LL G+ G A+ V ++ AG+ PD + L++ Y AG+
Sbjct: 232 REKIPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMA 291
Query: 328 KAYTAFQNMRKAGLEPSDKCVALILSA-CEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
AY +MRK G EP+ C +++ A C E +++ A+ +++ER G L
Sbjct: 292 DAYDLLNDMRKRGYEPNANCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTAL 351
Query: 387 AAWFKRLGVVEEVEHVL 403
+ F + G++++ VL
Sbjct: 352 ISGFCKWGMIDKGYSVL 368
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 86/214 (40%), Gaps = 34/214 (15%)
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL 221
+ E N+R +T +++G+ ++ ++ A+ L+ MK G D V T ++ Y+ AG +
Sbjct: 231 MREKIPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKM 290
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
A + +++ G + Y ++ A R + MD
Sbjct: 291 ADAYDLLNDMRKRGYEPNANCYTVLIQALCRTE---------KRMDE------------- 328
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
A RVF ++ G D LI+ + G K Y+ +MRK G+
Sbjct: 329 ------------AMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGV 376
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
PS IL A EK+ Q LE + +++ G
Sbjct: 377 MPSQVTYMQILVAHEKKEQFEECLELIEKMKQIG 410
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 100/241 (41%), Gaps = 20/241 (8%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRD 172
+ P + LL W R + KLME L + + E E +I
Sbjct: 235 IPPNLRYFTSLLYGWCR--------------EGKLMEAKEVL----VQMKEAGLEPDIVV 276
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMV-VMYSKAGNLKMAEETFEEI 231
+T ++ GY ++ +A + L M++RG+ + TV++ + + A F E+
Sbjct: 277 FTNLLSGYAHAGKMADAYDLLNDMRKRGYEPNANCYTVLIQALCRTEKRMDEAMRVFVEM 336
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
+ G D +Y +++ + + GM+D+G +L +M + V Y +L +
Sbjct: 337 ERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQILVAHEKKEQF 396
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP-SDKCVAL 350
E + E ++ G PD + ++I + ++A + M GL P +D V +
Sbjct: 397 EECLELIEKMKQIGCHPDLLIYNVVIRLACNFREVKEAVRLWNEMEANGLSPGADMFVIM 456
Query: 351 I 351
I
Sbjct: 457 I 457
>gi|255660922|gb|ACU25630.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 484
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 107/240 (44%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
FE N + KII G+ ++ +A LL M ++G D +M+ Y KAG ++ +
Sbjct: 41 FEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDXDMWVLMIDSYGKAGIVQESV 100
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+ F++++ LG +SY ++ +R G + +M ++ + + ++ G+
Sbjct: 101 KLFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGF 160
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
++G E A R FE ++ I+PD +IN Y + ++A F M+ +EP+
Sbjct: 161 FLSGKVETANRFFEDMKSREISPDVITYNTMINGYYRVKKMEEAEKYFVEMKGKNIEPNV 220
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ +Q++ AL + +++ G TL + E +L+E
Sbjct: 221 VTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKE 280
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 87/202 (43%), Gaps = 8/202 (3%)
Query: 163 EESFEANIRDYT---KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
E E I+ Y K+I G+ M + N +L+ G + T VM+ + +G
Sbjct: 108 ELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLS---EGIEPTRHTFNVMIWGFFLSG 164
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A FE++K D +Y +M+ Y R ++ E EM + + Y
Sbjct: 165 KVETANRFFEDMKSREISPDVITYNTMINGYYRVKKMEEAEKYFVEMKGKNIEPNVVTYT 224
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L++GY + A R+ E ++ GI P+A + L+ A + +A + + M
Sbjct: 225 TLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMLDK 284
Query: 340 GLEPSDKCV--ALILSACEKEN 359
+ P+D + LI S C+ N
Sbjct: 285 YIAPTDNSIFMRLISSQCKAGN 306
>gi|222616460|gb|EEE52592.1| hypothetical protein OsJ_34898 [Oryza sativa Japonica Group]
Length = 675
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 88/188 (46%), Gaps = 8/188 (4%)
Query: 158 ELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFIC-----DQVTLTVMV 212
E+ LL +++ N R YT ++ GY ++++ L AM+R G D VT T ++
Sbjct: 317 EVPLLPKAYPPNSRVYTTLMKGYMNAGRVEDVVAMLRAMRREGETSPASRPDHVTYTTVI 376
Query: 213 VMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY 272
AG+++ A EE+ G + +Y ++ Y + + + LL +D E
Sbjct: 377 STLVAAGDMERARAVLEEMGQAGVAASRVTYNVLIKGYCQQLQAGKAKELL-AVDMAEAG 435
Query: 273 VGSEV--YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAY 330
+ +V Y L+ G + +S GA +F ++ GI P A L+ A+ +GQ + A+
Sbjct: 436 IQPDVVTYNTLIDGCVLTDDSAGAVALFNEMRERGIAPSAVSYTTLMKAFAASGQPKLAH 495
Query: 331 TAFQNMRK 338
F M K
Sbjct: 496 KVFDEMEK 503
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 84/187 (44%), Gaps = 7/187 (3%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+ E + ++ Y +I G A M+ RG V+ T ++ ++ +G
Sbjct: 431 MAEAGIQPDVVTYNTLIDGCVLTDDSAGAVALFNEMRERGIAPSAVSYTTLMKAFAASGQ 490
Query: 221 LKMAEETFEEIKLLGEP---LDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
K+A + F+E++ +P +D+ ++ +V AY R G+L+ + ++ M A+ V
Sbjct: 491 PKLAHKVFDEME--KDPRVAVDRAAWNMLVEAYCRLGLLESAKKVVERMKARGVQPDVAT 548
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y +L +G ++ A ++E I+ + D + L + A +KA M
Sbjct: 549 YGSLAKGIAVARRPGEALLLWEEIKEKEV--DGEVVEALADVCVRAALFRKALEMVARME 606
Query: 338 KAGLEPS 344
+ G+EP+
Sbjct: 607 EMGVEPN 613
>gi|224142151|ref|XP_002324422.1| predicted protein [Populus trichocarpa]
gi|222865856|gb|EEF02987.1| predicted protein [Populus trichocarpa]
Length = 453
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 86/187 (45%), Gaps = 2/187 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ + +I G+ M + + L M+ G D VT + ++ +S AG + +E F
Sbjct: 257 NLFVFNSLIKGFLDTMDTEGVDEVLTLMEENGVRPDVVTFSTIMNAWSSAGRMDKCKEIF 316
Query: 229 EE-IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
+ +K EP D ++ + YVRAG ++ E +L M V+ + ++ G+
Sbjct: 317 NDMVKAEIEP-DIHAFSILAKGYVRAGEPEKAESILTSMRKYGVHPNVVICTTVISGWCS 375
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G E A +V+E + G++P+ + LI Y A Q KA Q M + G+ P
Sbjct: 376 AGKMEHAMKVYEKMCEIGVSPNLKTYETLIWGYGEAKQPLKAEELLQVMEEKGVFPKKGT 435
Query: 348 VALILSA 354
+ LI A
Sbjct: 436 MQLIADA 442
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 142/349 (40%), Gaps = 36/349 (10%)
Query: 59 KAEDMGKTQVKDDTSMFTWIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETG 118
K E+ G +K D+ +F I + + K+A+ F + CK P T
Sbjct: 73 KVEENG---MKPDSILFNSIINAFSESGNMKEAMKLFRKMKESGCK----------PTTS 119
Query: 119 NLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIH 178
+ L+ + K A LKL+E +LQ + + N R Y ++
Sbjct: 120 TFNTLIKGYGNAGKTEEA--------LKLLE---FLQ-------DGGVKPNQRTYNILVR 161
Query: 179 GYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPL 238
+ K ++ A N + M G D VT + Y++ G AEE E+
Sbjct: 162 AWCNKENMEEAWNMVYKMVASGMQPDAVTYNTLARAYAEKGETIRAEEMILEMLNRRVTP 221
Query: 239 DKRSYGSMVMAYVRAG-MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRV 297
++R+ +V Y + G M+D + R M V V+ +L++G+ ++EG V
Sbjct: 222 NERTCSIIVNGYCKEGNMVDASRFVFR-MKELGVLPNLFVFNSLIKGFLDTMDTEGVDEV 280
Query: 298 FEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEK 357
++ G+ PD + ++NA+ AG+ K F +M KA +EP +++ +
Sbjct: 281 LTLMEENGVRPDVVTFSTIMNAWSSAGRMDKCKEIFNDMVKAEIEPDIHAFSILAKGYVR 340
Query: 358 ENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREY 406
+ +A L + + G T+ + + G ++EH ++ Y
Sbjct: 341 AGEPEKAESILTSMRKYGVHPNVVICTTVISGWCSAG---KMEHAMKVY 386
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 115/269 (42%), Gaps = 6/269 (2%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+L++E + + YT ++ ++ ++ + ++ G D + ++ +S++G
Sbjct: 38 SLMDEGHKPTLITYTTLVAALTRQKLFKSILRLISKVEENGMKPDSILFNSIINAFSESG 97
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
N+K A + F ++K G ++ +++ Y AG + LL + V Y
Sbjct: 98 NMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAGKTEEALKLLEFLQDGGVKPNQRTYN 157
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+R + N E A + + +G+ PDA L AY G++ +A M
Sbjct: 158 ILVRAWCNKENMEEAWNMVYKMVASGMQPDAVTYNTLARAYAEKGETIRAEEMILEMLNR 217
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEV 399
+ P+++ ++I++ KE + A F+ ++ G + +L F E V
Sbjct: 218 RVTPNERTCSIIVNGYCKEGNMVDASRFVFRMKELGVLPNLFVFNSLIKGFLDTMDTEGV 277
Query: 400 EHVL---REYGLRE---TYSKIPGSRSIA 422
+ VL E G+R T+S I + S A
Sbjct: 278 DEVLTLMEENGVRPDVVTFSTIMNAWSSA 306
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 91/205 (44%), Gaps = 6/205 (2%)
Query: 170 IRDYTKIIH---GYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
+R TK+++ G GK + + N+L+ G +T T +V ++ K
Sbjct: 13 VRSRTKLMNVLIGKGKPREAHSIFNSLM---DEGHKPTLITYTTLVAALTRQKLFKSILR 69
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
+++ G D + S++ A+ +G + L R+M + + L++GY
Sbjct: 70 LISKVEENGMKPDSILFNSIINAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYG 129
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G +E A ++ E +Q G+ P+ R +L+ A+ ++A+ M +G++P
Sbjct: 130 NAGKTEEALKLLEFLQDGGVKPNQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQPDAV 189
Query: 347 CVALILSACEKENQLNRALEFLIDL 371
+ A ++ + RA E ++++
Sbjct: 190 TYNTLARAYAEKGETIRAEEMILEM 214
>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 892
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 99/222 (44%), Gaps = 4/222 (1%)
Query: 169 NIRDYTKIIH----GYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA 224
NI YT +++ G G + I+ A L + G + VT + K G +A
Sbjct: 205 NIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVA 264
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
+ + +PL+ + +++ + G+LD + +EM + Y L+ G
Sbjct: 265 WRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDG 324
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
+ G + A VF+ ++ +GI P+ ++LI+ + G+ KA F+ M+ +G+ P
Sbjct: 325 FCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPD 384
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
++++ ++ ++ A++F ++ + F C+L
Sbjct: 385 VYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSL 426
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 88/207 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N + +I+G + + A MK G + D + ++++ + + G + A E F
Sbjct: 279 NNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVF 338
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E++ G + SY ++ + + G +D+ + EM + Y L+ G+
Sbjct: 339 KEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRK 398
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G+ + A + +E + +P A LI Y + Q A F+ M+K G+ P
Sbjct: 399 GDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIAC 458
Query: 349 ALILSACEKENQLNRALEFLIDLERDG 375
ILS ++ N+AL + +G
Sbjct: 459 NHILSIYCRKPDFNKALALSEKFQENG 485
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 78/174 (44%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y+ +I G+ +K ++ A M+ G + + + ++++ + K G + A E F
Sbjct: 314 DVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVF 373
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
EE+K G D SY ++ + R G +D EM + + Y +L++GY +
Sbjct: 374 EEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKS 433
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
A + F +Q G+ PD C +++ Y KA + ++ G+
Sbjct: 434 KQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVH 487
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 89/215 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+ +F + +Y +I GY K Q NA M++ G D + ++ +Y + +
Sbjct: 411 MTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPD 470
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A E+ + G + SY + R + ++ LL M + V Y
Sbjct: 471 FNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYST 530
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ ++ NSE A +F + GIT + + +LIN + + AY F+ M+++
Sbjct: 531 LISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESR 590
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+ P +++ ++ RA ++ R+G
Sbjct: 591 VYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREG 625
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 97/230 (42%), Gaps = 19/230 (8%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRD 172
V P+ N S L++ + + + +A L ++++ ++ + N++
Sbjct: 521 VLPDVVNYSTLISCFAKRLNSEKAVML-------------FIKMTKVGI-----TFNVKT 562
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I+ + ++ A MK DQ+ T +V + G + A F+E+
Sbjct: 563 YTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMS 622
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +Y + Y++ ++ L +M + VY +Y L+ + G
Sbjct: 623 REGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMN 682
Query: 293 GAQRVFEAIQFAG-ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
A+ +F+ ++ G TP+ M LIN+Y + +A ++ MR GL
Sbjct: 683 RAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGL 732
>gi|218190347|gb|EEC72774.1| hypothetical protein OsI_06434 [Oryza sativa Indica Group]
Length = 579
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 112/265 (42%), Gaps = 2/265 (0%)
Query: 97 RKMTKRCKAFVKQIICVSPETGNLSDLLA-AWVRFMKPRRADWLAVLKQLKLMEHPLYLQ 155
R M + +++ + +C S ++ W K R ++++L+ L E L
Sbjct: 296 RFMNRSIYSYLVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAI 355
Query: 156 VAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
+ E+ ++ Y + GK Q+ N MK G I D T +M+ Y
Sbjct: 356 DLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSY 415
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
+ G + A E FE ++ D +Y S++ + G LD +L +EM +
Sbjct: 416 GRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDV 475
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
Y L+ + + E A +F+ + G TP+ +L++ + G++++A+ ++
Sbjct: 476 FTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGKTEEAHKLYET 535
Query: 336 MRKAGLEPSDKCVALILSACEKENQ 360
M++ GL P D IL E +Q
Sbjct: 536 MKQQGLIP-DSITYSILERLESRSQ 559
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 88/199 (44%), Gaps = 12/199 (6%)
Query: 188 NAENTLLA------MKRRGFICDQVTLTVMVVMYSKAGNLK---MAEETFEEIKLLGEPL 238
NAE TL A M +G + D V + MV +S G LK F+++K G
Sbjct: 347 NAEKTLEAIDLLHMMPEKGIVTD-VGMYNMV--FSALGKLKQVSFISNLFDKMKTNGIIP 403
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
D +Y M+ +Y R G++D+ L M+A Y +L+ +G+ + A +F
Sbjct: 404 DVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLF 463
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
+ +Q G PD ++LI + + + + A + F M G P+ ++L E+
Sbjct: 464 KEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERR 523
Query: 359 NQLNRALEFLIDLERDGFM 377
+ A + +++ G +
Sbjct: 524 GKTEEAHKLYETMKQQGLI 542
>gi|226494779|ref|NP_001147294.1| transferase, transferring glycosyl groups [Zea mays]
gi|195609598|gb|ACG26629.1| transferase, transferring glycosyl groups [Zea mays]
gi|414866930|tpg|DAA45487.1| TPA: hypothetical protein ZEAMMB73_715808 [Zea mays]
Length = 546
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 95/204 (46%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++IHG ++ A +K+RG+ D VT T ++ + + +A++ ++E+
Sbjct: 247 YQRVIHGLFRRRMGGEALRVFREIKQRGYDIDGVTYTTVIHGLCEMRLIGVAQQMWDEMV 306
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G ++ +Y S+V Y R G LD+ + EM + + L++G+ ++G
Sbjct: 307 GRGIAPNEYAYCSLVTYYCRVGDLDKARKVYDEMLEKGFKQTTVSCNILIKGFCVHGRVY 366
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A VFE + GI D LIN AG+ A ++ + +GLEP+ ++
Sbjct: 367 DALEVFEEMSIKGIKHDVITYDTLINGLFKAGKLDLAMRMYEWLLSSGLEPTSSTFGRLI 426
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
A + Q++ A++ + + G
Sbjct: 427 CAMCENGQVHAAVDLIKSMRTKGL 450
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 78/176 (44%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I YT +IHG K ++ A M +G D+VT T ++ Y KAG +K A
Sbjct: 381 DIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVH 440
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ G + +Y ++ + G +D LL EM + + Y ++ G
Sbjct: 441 NQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKI 500
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
GN E ++ E + AG PD L++AY G+ KA+ + M L+P+
Sbjct: 501 GNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPT 556
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 108/251 (43%), Gaps = 3/251 (1%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++++ N+ YT + G K +I A L M R+G + T +V K GN
Sbjct: 443 MVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGN 502
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ + EE+ L G D +Y +++ AY + G + + LLR M + + +
Sbjct: 503 IEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNV 562
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G+ M+G E +R+ E + GI P+A L+ Y + + ++ M G
Sbjct: 563 LMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRG 622
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMV-GKEASCTLAAWFKRLGVVE-- 397
+ P +++ K + A ++ G+ V + ++KR VE
Sbjct: 623 VMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEAR 682
Query: 398 EVEHVLREYGL 408
++ +R++GL
Sbjct: 683 KLFEEMRKHGL 693
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 98/232 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y II K ++ AE L M++ G D V T ++ + K GN+ A + F+E++
Sbjct: 315 YNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMR 374
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
D +Y S++ ++G + + EM + + Y AL+ GY G +
Sbjct: 375 RKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMK 434
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A V + G+TP+ L + G+ A M + GL+P+ I+
Sbjct: 435 EAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIV 494
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
+ K + + ++ + +++ GF TL + ++G + + +LR
Sbjct: 495 NGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLR 546
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 119/296 (40%), Gaps = 40/296 (13%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
++ + EL + + NI ++H + +++ A N L+ M RG D V+ V+
Sbjct: 229 VFEEFPELGVCWNTVSCNI-----VLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVV 283
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
V Y + G L + +E+K G D+ Y ++++ + G + E LLR M V
Sbjct: 284 VSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGV 343
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQ----------------------------- 302
+ + VY ++ G+ GN A ++F+ ++
Sbjct: 344 FPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEARE 403
Query: 303 ------FAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACE 356
G+ PD LI+ Y AG+ ++A++ M + GL P+ +
Sbjct: 404 MFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLC 463
Query: 357 KENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRETY 412
K +++ A E L ++ R G T+ ++G +E+ ++ E L Y
Sbjct: 464 KNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFY 519
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 85/200 (42%), Gaps = 1/200 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + E + YT +I GY K +++ A + M ++G + VT T + K G
Sbjct: 408 MLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGE 467
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ +A E E+ G + +Y ++V + G +++ L+ EMD Y + Y
Sbjct: 468 IDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTT 527
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ Y G A + + + P +L+N + M+G + + M + G
Sbjct: 528 LMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKG 587
Query: 341 LEPSDKCV-ALILSACEKEN 359
+ P+ +L+ C K N
Sbjct: 588 IMPNATTFNSLMKQYCIKNN 607
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 26/159 (16%), Positives = 71/159 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + + + + +++G+ +++ E + M +G + + T ++ Y N
Sbjct: 548 MLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNN 607
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ E ++ + G D +Y ++ + +A + L +EM + V + Y A
Sbjct: 608 MRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDA 667
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
L+RG+ A+++FE ++ G+ + + + ++
Sbjct: 668 LIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDV 706
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 108/250 (43%), Gaps = 17/250 (6%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L EE NI + +I GY + + A N M +R D V+ ++ Y++ G
Sbjct: 303 LFEEMPFPNIGSWNIMISGYCQNGDLAQARNLFDMMPQR----DSVSWAAIIAGYAQNGL 358
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE---- 276
+ A E+K GE L++ ++ + A L+ G +++ Q V G E
Sbjct: 359 YEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELG----KQVHGQVVRTGYEKGCL 414
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
V AL+ Y G + A VF+ +Q I M A Y G ++A T F++M
Sbjct: 415 VGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLA----GYARHGFGRQALTVFESM 470
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD-GFMVGKEASCTLAAWFKRLGV 395
AG++P + + +LSAC +R E+ + +D G + + R G
Sbjct: 471 ITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGC 530
Query: 396 VEEVEHVLRE 405
+EE ++++R
Sbjct: 531 LEEAQNLIRN 540
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 91/212 (42%), Gaps = 26/212 (12%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
++ GY K+ + +A + R D ++ M+ Y++ G+L A FEE
Sbjct: 194 LMGGYVKRNMLGDARQLFDQIPVR----DLISWNTMISGYAQDGDLSQARRLFEE----- 244
Query: 236 EPL-DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGA 294
P+ D ++ +MV AYV+ GMLD + EM + Y ++ GY+ +
Sbjct: 245 SPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMPQKR----EMSYNVMIAGYAQYKRMDMG 300
Query: 295 QRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV--ALIL 352
+ +FE + F P+ ++I+ Y G +A F M P V A I+
Sbjct: 301 RELFEEMPF----PNIGSWNIMISGYCQNGDLAQARNLFDMM------PQRDSVSWAAII 350
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASC 384
+ + A+ L++++RDG + + C
Sbjct: 351 AGYAQNGLYEEAMNMLVEMKRDGESLNRSTFC 382
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 75/177 (42%), Gaps = 5/177 (2%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I + ++ GY + + A +M G D++T+ ++ S G E F
Sbjct: 443 DIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYF 502
Query: 229 EEI-KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
+ K G + + Y M+ RAG L+ + L+R M + + + ALL +
Sbjct: 503 HSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEP---DAATWGALLGASRI 559
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
+GN E ++ E + F ++ M LL N Y +G+ MR+ G++ +
Sbjct: 560 HGNMELGEQAAEMV-FKMEPHNSGMYVLLSNLYAASGRWVDVSKMRLKMRQIGVQKT 615
>gi|356574085|ref|XP_003555182.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20740-like [Glycine max]
Length = 733
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 114/271 (42%), Gaps = 6/271 (2%)
Query: 130 FMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNA 189
F+ R D L L L +Y + E L+EES + ++ G K +I
Sbjct: 236 FLYNRVMDALVRTGHLDLALS-VYDDLKEDGLVEESVT-----FMVLVKGLCKCGRIDEM 289
Query: 190 ENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMA 249
L M+ R D T +V + AGNL +EE+K D ++Y +M++
Sbjct: 290 LEVLGRMRERLCKPDVFAYTALVKILVPAGNLDACLRVWEEMKRDRVEPDVKAYATMIVG 349
Query: 250 YVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPD 309
+ G + G L REM + V +Y AL+ + G E A + + + +G D
Sbjct: 350 LAKGGRVQEGYELFREMKGKGCLVDRVIYGALVEAFVAEGKVELAFDLLKDLVSSGYRAD 409
Query: 310 ARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLI 369
+ LI + QKAY FQ + GLEP V +L A + N++ + L
Sbjct: 410 LGIYICLIEGLCNLNRVQKAYKLFQLTVREGLEPDFLTVKPLLVAYAEANRMEEFCKLLE 469
Query: 370 DLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+++ GF V + S + ++ G + +E
Sbjct: 470 QMQKLGFPVIADLSKFFSVLVEKKGPIMALE 500
>gi|12321310|gb|AAG50731.1|AC079041_24 PPR-repeat protein, putative [Arabidopsis thaliana]
Length = 690
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 103/240 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ + +I+G+ K+ ++ A + M++RG D + + ++ Y KAG L M + F
Sbjct: 285 NVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLF 344
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ G LD + S + YV++G L V+ + M Q + Y L++G +
Sbjct: 345 SQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQD 404
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G A ++ I G+ P + LI+ + G + + +++M K G P
Sbjct: 405 GRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIY 464
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGL 408
+++ K+ + A+ F + + + +L + RL +E V R G+
Sbjct: 465 GVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGI 524
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 93/214 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + N+ YT +I G + +I A + +RG VT + ++ + K GN
Sbjct: 382 MLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGN 441
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ +E++ +G P D YG +V + G++ +M Q + + V+ +
Sbjct: 442 LRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNS 501
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G+ + A +VF + GI PD ++ M G+ ++A F M K G
Sbjct: 502 LIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMG 561
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
LEP ++ A K + L+ ++R+
Sbjct: 562 LEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRN 595
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 84/184 (45%), Gaps = 1/184 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E F I K++ G QI+ A L + G + VT ++ + K G
Sbjct: 243 VMERGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGE 301
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + F+ ++ G D +Y +++ Y +AGML G L + + V + V+ +
Sbjct: 302 MDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSS 361
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+ Y +G+ A V++ + GI+P+ +LI G+ +A+ + + K G
Sbjct: 362 TIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRG 421
Query: 341 LEPS 344
+EPS
Sbjct: 422 MEPS 425
>gi|222622462|gb|EEE56594.1| hypothetical protein OsJ_05954 [Oryza sativa Japonica Group]
Length = 579
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 112/265 (42%), Gaps = 2/265 (0%)
Query: 97 RKMTKRCKAFVKQIICVSPETGNLSDLLA-AWVRFMKPRRADWLAVLKQLKLMEHPLYLQ 155
R M + +++ + +C S ++ W K R ++++L+ L E L
Sbjct: 296 RFMNRSIYSYLVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAI 355
Query: 156 VAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
+ E+ ++ Y + GK Q+ N MK G I D T +M+ Y
Sbjct: 356 DLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSY 415
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
+ G + A E FE ++ D +Y S++ + G LD +L +EM +
Sbjct: 416 GRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDV 475
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
Y L+ + + E A +F+ + G TP+ +L++ + G++++A+ ++
Sbjct: 476 FTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGKTEEAHKLYET 535
Query: 336 MRKAGLEPSDKCVALILSACEKENQ 360
M++ GL P D IL E +Q
Sbjct: 536 MKQQGLIP-DSITYSILERLESRSQ 559
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 88/199 (44%), Gaps = 12/199 (6%)
Query: 188 NAENTLLA------MKRRGFICDQVTLTVMVVMYSKAGNLK---MAEETFEEIKLLGEPL 238
NAE TL A M +G + D V + MV +S G LK F+++K G
Sbjct: 347 NAEKTLEAIDLLHMMPEKGIVTD-VGMYNMV--FSALGKLKQVSFISNLFDKMKTNGIIP 403
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
D +Y M+ +Y R G++D+ L M+A Y +L+ +G+ + A +F
Sbjct: 404 DVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLF 463
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
+ +Q G PD ++LI + + + + A + F M G P+ ++L E+
Sbjct: 464 KEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERR 523
Query: 359 NQLNRALEFLIDLERDGFM 377
+ A + +++ G +
Sbjct: 524 GKTEEAHKLYETMKQQGLI 542
>gi|77552783|gb|ABA95579.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 697
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 88/188 (46%), Gaps = 8/188 (4%)
Query: 158 ELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFIC-----DQVTLTVMV 212
E+ LL +++ N R YT ++ GY ++++ L AM+R G D VT T ++
Sbjct: 339 EVPLLPKAYPPNSRVYTTLMKGYMNAGRVEDVVAMLRAMRREGETSPASRPDHVTYTTVI 398
Query: 213 VMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY 272
AG+++ A EE+ G + +Y ++ Y + + + LL +D E
Sbjct: 399 STLVAAGDMERARAVLEEMGQAGVAASRVTYNVLIKGYCQQLQAGKAKELL-AVDMAEAG 457
Query: 273 VGSEV--YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAY 330
+ +V Y L+ G + +S GA +F ++ GI P A L+ A+ +GQ + A+
Sbjct: 458 IQPDVVTYNTLIDGCVLTDDSAGAVALFNEMRERGIAPSAVSYTTLMKAFAASGQPKLAH 517
Query: 331 TAFQNMRK 338
F M K
Sbjct: 518 KVFDEMEK 525
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 84/187 (44%), Gaps = 7/187 (3%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+ E + ++ Y +I G A M+ RG V+ T ++ ++ +G
Sbjct: 453 MAEAGIQPDVVTYNTLIDGCVLTDDSAGAVALFNEMRERGIAPSAVSYTTLMKAFAASGQ 512
Query: 221 LKMAEETFEEIKLLGEP---LDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
K+A + F+E++ +P +D+ ++ +V AY R G+L+ + ++ M A+ V
Sbjct: 513 PKLAHKVFDEME--KDPRVAVDRAAWNMLVEAYCRLGLLESAKKVVERMKARGVQPDVAT 570
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y +L +G ++ A ++E I+ + D + L + A +KA M
Sbjct: 571 YGSLAKGIAVARRPGEALLLWEEIKEKEV--DGEVVEALADVCVRAALFRKALEMVARME 628
Query: 338 KAGLEPS 344
+ G+EP+
Sbjct: 629 EMGVEPN 635
>gi|58013026|gb|AAW62966.1| chloroplast embryo-defective 1270 [Arabidopsis thaliana]
Length = 1429
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 97/201 (48%), Gaps = 1/201 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +++ + ++ + + M++ GF D++T ++ MY K G L +A + ++++K
Sbjct: 370 YNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMK 429
Query: 233 -LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
L G D +Y ++ + +A L+ EM + + Y AL+ GY+ G
Sbjct: 430 GLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKR 489
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALI 351
E A+ F + +G PD +++++ +++KA+ +++M G PS L+
Sbjct: 490 EEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELM 549
Query: 352 LSACEKENQLNRALEFLIDLE 372
+ KEN+ + + + D+E
Sbjct: 550 ILGLMKENRSDDIQKTIRDME 570
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 94/205 (45%), Gaps = 2/205 (0%)
Query: 170 IRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL--KMAEET 227
++ Y ++ Y + + A+ + AM++RG + D ++ ++ K+G L +A E
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVEL 284
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
+ ++ G D +Y +++ A R LD + +M+A Y A++ Y
Sbjct: 285 LDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGR 344
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G + A+R+F ++ G PDA L+ A+ ++K +Q M+K G +
Sbjct: 345 CGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMT 404
Query: 348 VALILSACEKENQLNRALEFLIDLE 372
I+ K+ QL+ AL+ D++
Sbjct: 405 YNTIIHMYGKQGQLDLALQLYKDMK 429
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 87/184 (47%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
IR Y +I K ++++AE + M+ F + M+ MY+ + K + +
Sbjct: 891 TIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVY 950
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ IK G D+ +Y ++++ Y R + G +L+++M + + YK+L+ +
Sbjct: 951 QRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQ 1010
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A+++FE + G+ D ++ + +G KA Q M+ AG+EP+ +
Sbjct: 1011 KCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATM 1070
Query: 349 ALIL 352
L++
Sbjct: 1071 HLLM 1074
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 91/213 (42%), Gaps = 2/213 (0%)
Query: 193 LLAMKRR-GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYV 251
LL M R G D +T ++ S+ NL A + FE+++ D +Y +M+ Y
Sbjct: 284 LLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYG 343
Query: 252 RAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDAR 311
R G+ E L E++ + + + Y +LL ++ N+E + V++ +Q G D
Sbjct: 344 RCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEM 403
Query: 312 MCALLINAYQMAGQSQKAYTAFQNMRK-AGLEPSDKCVALILSACEKENQLNRALEFLID 370
+I+ Y GQ A +++M+ +G P +++ + K N+ A + +
Sbjct: 404 TYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSE 463
Query: 371 LERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+ G + L + + G EE E
Sbjct: 464 MLDVGIKPTLQTYSALICGYAKAGKREEAEDTF 496
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 93/205 (45%)
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
GF + ++ +M+ +++AGN+ ++ + +K G R Y M+ + +
Sbjct: 852 GFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDA 911
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
E+++ EM+ V ++ ++L+ Y+ + + +V++ I+ G+ PD LI
Sbjct: 912 EIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIM 971
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
Y + ++ Y Q MR GL+P ++SA K+ L +A + +L G +
Sbjct: 972 YCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLD 1031
Query: 380 KEASCTLAAWFKRLGVVEEVEHVLR 404
+ T+ + G + E +L+
Sbjct: 1032 RSFYHTMMKISRDSGSDSKAEKLLQ 1056
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 83/180 (46%), Gaps = 1/180 (0%)
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG-SEVYKALL 282
A + F +++L G + SMV+ Y + G + ++ + + + + S +Y ++
Sbjct: 700 ASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDII 759
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
Y + A+ V ++ +G TPD + L++AY G ++A F M + G
Sbjct: 760 EAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPS 819
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + + ++L A + +L + +L+ GF + K + + F R G + EV+ +
Sbjct: 820 PTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKI 879
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 110/272 (40%), Gaps = 10/272 (3%)
Query: 136 ADWLAVLKQLKLME-HPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLL 194
A W ++LK +E + +QV + + E E + Y +I Y + + + +
Sbjct: 928 AIWNSMLKMYTAIEDYKKTVQVYQ-RIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQ 986
Query: 195 AMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG 254
M+ G T ++ + K L+ AE+ FEE+ G LD+ Y +M+ +G
Sbjct: 987 QMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSG 1046
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
+ E LL+ M + L+ YS +GN + A++V ++ + +
Sbjct: 1047 SDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYS 1106
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
+I+AY + M+K GLEP + + A + + L LE
Sbjct: 1107 SVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKEKIEVMLLLKALEDI 1166
Query: 375 GF------MVGKEA--SCTLAAWFKRLGVVEE 398
GF + G+ + WF++L +E+
Sbjct: 1167 GFDLPIRLLAGRPELLVSEVDGWFEKLKSIED 1198
>gi|449442096|ref|XP_004138818.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
mitochondrial-like [Cucumis sativus]
gi|449490234|ref|XP_004158545.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
mitochondrial-like [Cucumis sativus]
Length = 823
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 96/214 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++I K +++ + + GF D T ++ ++ G A E +E +
Sbjct: 233 YNRVIQYLAKAEKLEVSFCCFKKIHDSGFKVDTQTYNSLITLFLNKGLPYKAFEIYESMA 292
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
LD ++ M+ ++G LD L +EM ++ VY +L+ G +
Sbjct: 293 GAECSLDASTFELMIPCLAKSGRLDAAMKLFQEMKEKKYRPAQNVYSSLVDSMGKAGRLD 352
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
+ +++ +Q + P A M LI ++ AG+ A + +M++AG +P+ ++++
Sbjct: 353 TSMKIYMEMQLLELRPSALMFVSLIESHVKAGKLDTALKLWDDMKRAGFKPNFGLYSMVV 412
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
+ K +L+ A+ ++E+ GF+ C L
Sbjct: 413 ESHAKSGKLDVAMSVFTEMEKAGFLPIPSTYCCL 446
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/243 (19%), Positives = 103/243 (42%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+ F+ + + Y +I + K A +M D T +M+ +K+G L
Sbjct: 258 DSGFKVDTQTYNSLITLFLNKGLPYKAFEIYESMAGAECSLDASTFELMIPCLAKSGRLD 317
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A + F+E+K + Y S+V + +AG LD + EM E+ + ++ +L+
Sbjct: 318 AAMKLFQEMKEKKYRPAQNVYSSLVDSMGKAGRLDTSMKIYMEMQLLELRPSALMFVSLI 377
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
+ G + A ++++ ++ AG P+ + ++++ ++ +G+ A + F M KAG
Sbjct: 378 ESHVKAGKLDTALKLWDDMKRAGFKPNFGLYSMVVESHAKSGKLDVAMSVFTEMEKAGFL 437
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P +L ++ A++ + G +G +L +++ V
Sbjct: 438 PIPSTYCCLLEMQAASGHVDAAMKLYNSMTNAGLRLGLNTYTSLLTLLANKKLIDIAAKV 497
Query: 403 LRE 405
L E
Sbjct: 498 LLE 500
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 84/196 (42%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
MK + + Q + +V KAG L + + + E++LL + S++ ++V+AG
Sbjct: 326 MKEKKYRPAQNVYSSLVDSMGKAGRLDTSMKIYMEMQLLELRPSALMFVSLIESHVKAGK 385
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
LD L +M +Y ++ ++ +G + A VF ++ AG P
Sbjct: 386 LDTALKLWDDMKRAGFKPNFGLYSMVVESHAKSGKLDVAMSVFTEMEKAGFLPIPSTYCC 445
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
L+ +G A + +M AGL +L+ + ++ A + L++++ G
Sbjct: 446 LLEMQAASGHVDAAMKLYNSMTNAGLRLGLNTYTSLLTLLANKKLIDIAAKVLLEMKAMG 505
Query: 376 FMVGKEASCTLAAWFK 391
F V AS L + K
Sbjct: 506 FSVSVSASDVLMVYIK 521
>gi|422293946|gb|EKU21246.1| hypothetical protein NGA_2092600 [Nannochloropsis gaditana CCMP526]
Length = 659
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 114/274 (41%), Gaps = 20/274 (7%)
Query: 107 VKQIICVSPETGNLSDLLAAWVRFMK---PRRADWLAVLKQLKLMEHPLYLQVAELALLE 163
V ++ +S E L + A V F+ RR DW + L +++ PL
Sbjct: 176 VDLLVSLSEEEDGLHAIDRALVNFVLYNCMRRRDWT---RALTVLDAPL----------- 221
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
E ++ +T I G+ + + A L M+ RG D V+ + KAG +
Sbjct: 222 --IEVDVVGFTMAIKACGQARRWREALGVLREMQARGLRPDLVSFNTAMDALGKAGQYDL 279
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A E F EI+ G + SY + + A RAGM+DR LLREM V S Y ++
Sbjct: 280 ALELFTEIEDHGFAPNLVSYNTAIHACGRAGMVDRAHELLREMQGLSVRPDSVSYNTVMA 339
Query: 284 GYSMNGNSEGAQRVFEAIQFA-GITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
++ + A + ++ A G+ PD ++ AG+ ++A GL+
Sbjct: 340 AFAKKNQWKAALELLAEMKEAPGVDPDLISYNTAMHVCAKAGRWERATELLTEALGQGLQ 399
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
P ++ AC + + +AL+ +E G
Sbjct: 400 PDVVSYNTVMHACGRAGEYLQALDLFGMMEEVGV 433
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 96/233 (41%), Gaps = 25/233 (10%)
Query: 153 YLQVAEL-ALLEESFEANIR-DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTV 210
YLQ +L ++EE A R + +H + ++ Q A L M+ R + + T+
Sbjct: 418 YLQALDLFGMMEEVGVAPDRVSFNTAMHACNRALKWQAALQILREMEARSIAPNVKSYTI 477
Query: 211 MVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE 270
V +AG + A E EE+++ G P + +Y + + A R G +DR VLL EMD +
Sbjct: 478 AVDACGRAGEWERALELMEEMEVRGVPANVHTYTAAMDACCRGGAVDRVLVLLEEMDGKG 537
Query: 271 VYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAY 330
V Y + + G + A V E + G+ D S
Sbjct: 538 VEPNVVSYTIAMDAMNRVGKWDRASAVLEQMVQRGLRLD----------------SVSYR 581
Query: 331 TAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEAS 383
TA +AG E ++ ++ + ++ + R ER+G G E+S
Sbjct: 582 TALSTAGRAGDEEGERLTKIVHESRQRGHARQRG-------ERNGPGEGGESS 627
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 58/309 (18%), Positives = 120/309 (38%), Gaps = 24/309 (7%)
Query: 74 MFTWIQ---IGPNITEEQKQAISQFPRKMTKRCKAFVKQI--ICVSPETGNLSDLLAAWV 128
+FT I+ PN+ + M R ++++ + V P++ + + ++AA+
Sbjct: 283 LFTEIEDHGFAPNLVSYNTAIHACGRAGMVDRAHELLREMQGLSVRPDSVSYNTVMAAFA 342
Query: 129 RFMKPRRADWLAVLKQLKLM-EHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQ 187
+ + W A L+ L M E P + ++ Y +H K + +
Sbjct: 343 K-----KNQWKAALELLAEMKEAP-------------GVDPDLISYNTAMHVCAKAGRWE 384
Query: 188 NAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMV 247
A L +G D V+ ++ +AG A + F ++ +G D+ S+ + +
Sbjct: 385 RATELLTEALGQGLQPDVVSYNTVMHACGRAGEYLQALDLFGMMEEVGVAPDRVSFNTAM 444
Query: 248 MAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGIT 307
A RA +LREM+A+ + + Y + G E A + E ++ G+
Sbjct: 445 HACNRALKWQAALQILREMEARSIAPNVKSYTIAVDACGRAGEWERALELMEEMEVRGVP 504
Query: 308 PDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
+ ++A G + + M G+EP+ + + A + + +RA
Sbjct: 505 ANVHTYTAAMDACCRGGAVDRVLVLLEEMDGKGVEPNVVSYTIAMDAMNRVGKWDRASAV 564
Query: 368 LIDLERDGF 376
L + + G
Sbjct: 565 LEQMVQRGL 573
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 98/231 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y II G K + AE M RG D VT ++ KA + AE F+++
Sbjct: 298 YNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMI 357
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y ++ +A +DR E + ++M + V + Y L+ GY G E
Sbjct: 358 DKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWE 417
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
+ + + + PD LL++ G+ +A + F +M + G++PS ++L
Sbjct: 418 EVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIML 477
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
K+ L+ + L + +G T+ + + +++EV H+
Sbjct: 478 HGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIF 528
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 95/226 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y II G K I AE M +G D +T T+++ KA ++ AE F+++
Sbjct: 333 YNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMI 392
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +Y ++ Y+ G + ++EM A ++ Y LL NG
Sbjct: 393 DKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCN 452
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ +F+++ GI P + ++++ Y G + + M G+ P+ + ++
Sbjct: 453 EARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVI 512
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
A K ++ + I +++ G TL +LG V++
Sbjct: 513 CAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDD 558
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 95/224 (42%), Gaps = 5/224 (2%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
LE ++ Y II G K ++ AE+ M +G + VT ++ KA
Sbjct: 216 FLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQE 275
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ MAE F+++ G +Y +++ +A +DR E + ++M + V Y
Sbjct: 276 VDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNT 335
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G + A+ VF+ + G+ PD ++I+ A +A FQ M G
Sbjct: 336 IIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKG 395
Query: 341 LEPSDKCVALI----LSACEKENQLNRALEFLI-DLERDGFMVG 379
++P++ + LS + E + R E DLE D F G
Sbjct: 396 VKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYG 439
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 99/261 (37%), Gaps = 9/261 (3%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ N R + +I Y K+ I + + MK++G + VT ++ K G
Sbjct: 496 MVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGR 555
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A F ++ G + + S+V ++ E L EM Q + +
Sbjct: 556 VDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNT 615
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+L G A+R+ +++ G+ PD LI+ + A + +A M AG
Sbjct: 616 VLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAG 675
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
L+P+ +L K +++ A ++ R G G E T+ R G E
Sbjct: 676 LKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEA- 734
Query: 401 HVLREYGLRETYSKIPGSRSI 421
RE Y + SR +
Sbjct: 735 --------RELYVNMIKSRKL 747
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 86/219 (39%), Gaps = 5/219 (2%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ E N + +++G + + E L M +G D V ++ K G
Sbjct: 566 MINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGR 625
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + + +G D SY +++ + A +D LL M + + Y
Sbjct: 626 VMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNT 685
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL GY G + A +F + G+TP ++N +G+ +A + NM K+
Sbjct: 686 LLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSR 745
Query: 341 LEPSDKCVALILSACEKENQLNRALEFL-----IDLERD 374
S ++IL K N + A + +DL+ D
Sbjct: 746 KLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLD 784
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 17/170 (10%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDR---GE 260
D T ++++ + + G L++ F I G +D +V+ + G+ D GE
Sbjct: 83 DCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVD-----DIVVNQLLKGLCDTKRVGE 137
Query: 261 ---VLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI---QFAGITPDARMCA 314
VLLR+M +G Y LL+G +E A+ + + Q + +PD
Sbjct: 138 AMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYN 197
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
++IN + GQ KAY+ F M G+ P I+ K +++RA
Sbjct: 198 IVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRA 244
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 61/140 (43%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
L +L + +I + ++ K+ ++ A + +M G D ++ ++ + A
Sbjct: 599 LEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFA 658
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
+ A + + + G + SY +++ Y +AG +D L REM + V G E Y
Sbjct: 659 SRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETY 718
Query: 279 KALLRGYSMNGNSEGAQRVF 298
+L G +G A+ ++
Sbjct: 719 NTILNGLFRSGRFSEARELY 738
>gi|410110081|gb|AFV61120.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
camara]
Length = 381
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 100/212 (47%), Gaps = 4/212 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y +I YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 173 KNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDR 232
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ + +M++AY RAG++ + LL E+ + + + +L
Sbjct: 233 AAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDTAIHILA 291
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + F MR G P
Sbjct: 292 G---AGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFP 348
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDG 375
+ ++L+A K + ++A + ++++ G
Sbjct: 349 DSNVITVVLNAYGKLQEFDKANDVYMEMQEVG 380
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 102/237 (43%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 73 NTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 132
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 133 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKT 192
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G+E
Sbjct: 193 LEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILF 252
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE +V R+
Sbjct: 253 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGA----GRIEEATYVFRQ 305
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 101/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + MK G + + + ++ MY + A
Sbjct: 35 FTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVXPNTTSYSTLLTMYVENKKFLEAL 94
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 95 SVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 154
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + +I Y + +KA Q M+ G+E
Sbjct: 155 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIE 211
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 212 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRL 271
Query: 403 LRE 405
L E
Sbjct: 272 LHE 274
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 60/141 (42%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D V + ++ + K + A F +K G D +Y +M+ + +A + L+
Sbjct: 3 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 62
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
EM V + Y LL Y N A VF ++ D C ++I+ Y
Sbjct: 63 SEMKTAGVXPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 122
Query: 324 GQSQKAYTAFQNMRKAGLEPS 344
G +++A F MRK G+EP+
Sbjct: 123 GMAKEADKLFWGMRKMGIEPN 143
>gi|168006155|ref|XP_001755775.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693094|gb|EDQ79448.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 429
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 100/182 (54%), Gaps = 4/182 (2%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKL-LGEPLDKRSYGSMVMAYVRAG 254
MK G D T +++ + S++G+++ E+ FEE+K D ++G++ A V AG
Sbjct: 111 MKAHGVPKDVYTYNILMDVKSRSGDIEGMEKIFEELKADENVKADAATFGTLATACVHAG 170
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
+L++ +V L+EM+ +++ Y L+ Y G+ +G +RV+E ++ I + R
Sbjct: 171 LLEKAKVYLKEMEEGDIFRNRSAYDILISQYGAVGDVDGVERVWEKVKSGPIVSN-RSYI 229
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKA-GLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
+I A+ G +KA ++ M ++ GL S + +L LSA ++ +++A + + D+E+
Sbjct: 230 TVIEAFGKLGMVEKAEELYEVMSQSKGLILSRQFNSL-LSAYTRQGLMDKAEKLMDDMEK 288
Query: 374 DG 375
G
Sbjct: 289 LG 290
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 89/190 (46%), Gaps = 12/190 (6%)
Query: 186 IQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGS 245
++ A+ L M+ ++ +++ Y G++ E +E++K G + RSY +
Sbjct: 172 LEKAKVYLKEMEEGDIFRNRSAYDILISQYGAVGDVDGVERVWEKVKS-GPIVSNRSYIT 230
Query: 246 MVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAG 305
++ A+ + GM+++ E L M + + S + +LL Y+ G + A+++ + ++ G
Sbjct: 231 VIEAFGKLGMVEKAEELYEVMSQSKGLILSRQFNSLLSAYTRQGLMDKAEKLMDDMEKLG 290
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS--------DKCVALILSACEK 357
+A L+ Y Q KA A M++A ++P + VA++ + E+
Sbjct: 291 RKKNAITYHHLVTGYLKTDQLDKAVAA---MKEALVDPKQGRSKPWFETLVAVLDAFAER 347
Query: 358 ENQLNRALEF 367
N +N +F
Sbjct: 348 GNVVNAEQQF 357
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 86/186 (46%), Gaps = 8/186 (4%)
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKR-RGFICDQVTLTVMVVMYSKAGNLKMAEETFE 229
R Y +I +GK ++ AE M + +G I + ++ Y++ G + AE+ +
Sbjct: 226 RSYITVIEAFGKLGMVEKAEELYEVMSQSKGLILSR-QFNSLLSAYTRQGLMDKAEKLMD 284
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLRE--MDAQEVYVGS--EVYKALLRGY 285
+++ LG + +Y +V Y++ LD+ ++E +D ++ E A+L +
Sbjct: 285 DMEKLGRKKNAITYHHLVTGYLKTDQLDKAVAAMKEALVDPKQGRSKPWFETLVAVLDAF 344
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
+ GN A++ F+ I+ A + ++ +L+ AY A M L P+D
Sbjct: 345 AERGNVVNAEQQFQEIKKAYPRLNIQVYNILLKAY--INSRVPALGFLHRMSTDKLVPND 402
Query: 346 KCVALI 351
+ ++L+
Sbjct: 403 ETLSLL 408
>gi|334185431|ref|NP_188439.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|322510063|sp|Q5G1S8.2|PP241_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g18110, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 1270; Flags: Precursor
gi|9294066|dbj|BAB02023.1| unnamed protein product [Arabidopsis thaliana]
gi|332642528|gb|AEE76049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1440
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 97/201 (48%), Gaps = 1/201 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +++ + ++ + + M++ GF D++T ++ MY K G L +A + ++++K
Sbjct: 370 YNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMK 429
Query: 233 -LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
L G D +Y ++ + +A L+ EM + + Y AL+ GY+ G
Sbjct: 430 GLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKR 489
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALI 351
E A+ F + +G PD +++++ +++KA+ +++M G PS L+
Sbjct: 490 EEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELM 549
Query: 352 LSACEKENQLNRALEFLIDLE 372
+ KEN+ + + + D+E
Sbjct: 550 ILGLMKENRSDDIQKTIRDME 570
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 94/205 (45%), Gaps = 2/205 (0%)
Query: 170 IRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL--KMAEET 227
++ Y ++ Y + + A+ + AM++RG + D ++ ++ K+G L +A E
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVEL 284
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
+ ++ G D +Y +++ A R LD + +M+A Y A++ Y
Sbjct: 285 LDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGR 344
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G + A+R+F ++ G PDA L+ A+ ++K +Q M+K G +
Sbjct: 345 CGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMT 404
Query: 348 VALILSACEKENQLNRALEFLIDLE 372
I+ K+ QL+ AL+ D++
Sbjct: 405 YNTIIHMYGKQGQLDLALQLYKDMK 429
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 94/204 (46%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
IR Y +I K ++++AE + M+ F + M+ MY+ + K + +
Sbjct: 891 TIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVY 950
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ IK G D+ +Y ++++ Y R + G +L+++M + + YK+L+ +
Sbjct: 951 QRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQ 1010
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A+++FE + G+ D ++ + +G KA Q M+ AG+EP+ +
Sbjct: 1011 KCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATM 1070
Query: 349 ALILSACEKENQLNRALEFLIDLE 372
L++ + A + L +L+
Sbjct: 1071 HLLMVSYSSSGNPQEAEKVLSNLK 1094
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 91/213 (42%), Gaps = 2/213 (0%)
Query: 193 LLAMKRR-GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYV 251
LL M R G D +T ++ S+ NL A + FE+++ D +Y +M+ Y
Sbjct: 284 LLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYG 343
Query: 252 RAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDAR 311
R G+ E L E++ + + + Y +LL ++ N+E + V++ +Q G D
Sbjct: 344 RCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEM 403
Query: 312 MCALLINAYQMAGQSQKAYTAFQNMRK-AGLEPSDKCVALILSACEKENQLNRALEFLID 370
+I+ Y GQ A +++M+ +G P +++ + K N+ A + +
Sbjct: 404 TYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSE 463
Query: 371 LERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+ G + L + + G EE E
Sbjct: 464 MLDVGIKPTLQTYSALICGYAKAGKREEAEDTF 496
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 93/205 (45%)
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
GF + ++ +M+ +++AGN+ ++ + +K G R Y M+ + +
Sbjct: 852 GFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDA 911
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
E+++ EM+ V ++ ++L+ Y+ + + +V++ I+ G+ PD LI
Sbjct: 912 EIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIM 971
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
Y + ++ Y Q MR GL+P ++SA K+ L +A + +L G +
Sbjct: 972 YCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLD 1031
Query: 380 KEASCTLAAWFKRLGVVEEVEHVLR 404
+ T+ + G + E +L+
Sbjct: 1032 RSFYHTMMKISRDSGSDSKAEKLLQ 1056
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 83/180 (46%), Gaps = 1/180 (0%)
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG-SEVYKALL 282
A + F +++L G + SMV+ Y + G + ++ + + + + S +Y ++
Sbjct: 700 ASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDII 759
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
Y + A+ V ++ +G TPD + L++AY G ++A F M + G
Sbjct: 760 EAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPS 819
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + + ++L A + +L + +L+ GF + K + + F R G + EV+ +
Sbjct: 820 PTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKI 879
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 96/244 (39%), Gaps = 8/244 (3%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E E + Y +I Y + + + + M+ G T ++ + K L+
Sbjct: 955 ETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLE 1014
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
AE+ FEE+ G LD+ Y +M+ +G + E LL+ M + L+
Sbjct: 1015 QAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLM 1074
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
YS +GN + A++V ++ + + +I+AY + M+K GLE
Sbjct: 1075 VSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLE 1134
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGF------MVGKEA--SCTLAAWFKRLG 394
P + + A + + L LE GF + G+ + WF++L
Sbjct: 1135 PDHRIWTCFVRAASFSKEKIEVMLLLKALEDIGFDLPIRLLAGRPELLVSEVDGWFEKLK 1194
Query: 395 VVEE 398
+E+
Sbjct: 1195 SIED 1198
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 7/206 (3%)
Query: 146 KLMEHPLYLQ---VAELALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKR 198
L+ H L++ L+EE ++ Y +I+G+ K+ ++ A M R
Sbjct: 183 NLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSR 242
Query: 199 RGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDR 258
RG VT T ++ SK G ++ ++ F+E G D Y +++ ++ +G +DR
Sbjct: 243 RGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDR 302
Query: 259 GEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLIN 318
++ EM+ + + Y L+RG + G + A+++ + + GI PD LI+
Sbjct: 303 AFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLIS 362
Query: 319 AYQMAGQSQKAYTAFQNMRKAGLEPS 344
Y M G + A M G P+
Sbjct: 363 GYSMKGDVKDALRIRNEMMNKGFNPT 388
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 2/199 (1%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
A + YT +I+ KK Q+Q + RRG D V ++ +S +GN+ A E
Sbjct: 247 ATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEI 306
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
E++ D +Y +++ G +D L+ EM + + Y L+ GYSM
Sbjct: 307 MGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSM 366
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G+ + A R+ + G P LI GQ A + M + G+ P D
Sbjct: 367 KGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDST 426
Query: 348 VALILSACEKENQLNRALE 366
++ E++ RA++
Sbjct: 427 YISLIEGLTTEDE--RAID 443
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 95/220 (43%), Gaps = 2/220 (0%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFIC-DQVTLTVMVVMYSK 217
L LL + N Y +I G+ + ++Q A + + M+ RG I +Q T ++ + K
Sbjct: 61 LELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCK 120
Query: 218 AGNLKMAEETFEEIKLLGE-PLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
G + A + F+E+ GE + Y +++ Y G LD + M + V +
Sbjct: 121 VGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVA 180
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
Y L+ M+G A + E + G+ PD +LIN + G +KA F+NM
Sbjct: 181 TYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENM 240
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+ G+ + ++ A K+ Q+ + + R G
Sbjct: 241 SRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGI 280
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 87/216 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E + Y ++H + A + M +G D T +++ + K GN
Sbjct: 170 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGN 229
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+K A E FE + G +Y S++ A + G + + L E + + +Y A
Sbjct: 230 VKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNA 289
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ +S +GN + A + ++ I PD L+ + G+ +A M K G
Sbjct: 290 LINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRG 349
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
++P ++S + + AL ++ GF
Sbjct: 350 IQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGF 385
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/233 (19%), Positives = 90/233 (38%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I GY + ++ A M RG T ++V G A E EE+
Sbjct: 147 YNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMG 206
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y ++ + + G + + + M + V Y +L+ S G +
Sbjct: 207 GKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQ 266
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
++F+ GI PD + LIN++ +G +A+ M K + P D ++
Sbjct: 267 ETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLM 326
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+++ A + + ++ + G TL + + G V++ + E
Sbjct: 327 RGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNE 379
>gi|115486864|ref|NP_001065238.1| Os12g0102600 [Oryza sativa Japonica Group]
gi|113648426|dbj|BAF28938.1| Os12g0102600, partial [Oryza sativa Japonica Group]
Length = 712
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 88/188 (46%), Gaps = 8/188 (4%)
Query: 158 ELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFIC-----DQVTLTVMV 212
E+ LL +++ N R YT ++ GY ++++ L AM+R G D VT T ++
Sbjct: 354 EVPLLPKAYPPNSRVYTTLMKGYMNAGRVEDVVAMLRAMRREGETSPASRPDHVTYTTVI 413
Query: 213 VMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY 272
AG+++ A EE+ G + +Y ++ Y + + + LL +D E
Sbjct: 414 STLVAAGDMERARAVLEEMGQAGVAASRVTYNVLIKGYCQQLQAGKAKELL-AVDMAEAG 472
Query: 273 VGSEV--YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAY 330
+ +V Y L+ G + +S GA +F ++ GI P A L+ A+ +GQ + A+
Sbjct: 473 IQPDVVTYNTLIDGCVLTDDSAGAVALFNEMRERGIAPSAVSYTTLMKAFAASGQPKLAH 532
Query: 331 TAFQNMRK 338
F M K
Sbjct: 533 KVFDEMEK 540
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 84/187 (44%), Gaps = 7/187 (3%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+ E + ++ Y +I G A M+ RG V+ T ++ ++ +G
Sbjct: 468 MAEAGIQPDVVTYNTLIDGCVLTDDSAGAVALFNEMRERGIAPSAVSYTTLMKAFAASGQ 527
Query: 221 LKMAEETFEEIKLLGEP---LDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
K+A + F+E++ +P +D+ ++ +V AY R G+L+ + ++ M A+ V
Sbjct: 528 PKLAHKVFDEME--KDPRVAVDRAAWNMLVEAYCRLGLLESAKKVVERMKARGVQPDVAT 585
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y +L +G ++ A ++E I+ + D + L + A +KA M
Sbjct: 586 YGSLAKGIAVARRPGEALLLWEEIKEKEV--DGEVVEALADVCVRAALFRKALEMVARME 643
Query: 338 KAGLEPS 344
+ G+EP+
Sbjct: 644 EMGVEPN 650
>gi|357123530|ref|XP_003563463.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Brachypodium distachyon]
Length = 862
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 97/230 (42%), Gaps = 1/230 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y ++ + AE L AM G + D + +V +++AG+L E F
Sbjct: 244 DLTTYNTLLAAAAVRSLNDQAEMLLRAMLEAGVLPDTASYRHIVDAFARAGDLSRVAELF 303
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E+ G D +Y ++ A+ R G +LR+M A + Y+ LL Y
Sbjct: 304 REMADTGHTPDPSAYLGLMEAHTRVGATAEAVAVLRQMQADGCAPTAATYRVLLDLYGRQ 363
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G +G + +F ++ A + PD +L + + G ++ F +M + G+EP +
Sbjct: 364 GRFDGVRELFREMRTA-VPPDTATYNVLFSVFGDGGFFKEVVELFHDMLRTGIEPDMETC 422
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
+L AC + A E L + ++G + +A L + EE
Sbjct: 423 EGVLVACGQGGLHEDAREVLDYITKEGMVPTAKAYTGLVEALGHAAMYEE 472
Score = 41.2 bits (95), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 39/226 (17%), Positives = 92/226 (40%), Gaps = 3/226 (1%)
Query: 152 LYLQVAEL--ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLT 209
+ +V EL +L E ++ ++ G+ ++A L + + G + T
Sbjct: 399 FFKEVVELFHDMLRTGIEPDMETCEGVLVACGQGGLHEDAREVLDYITKEGMVPTAKAYT 458
Query: 210 VMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM-DA 268
+V A + A F + +G +Y S+ + + G+ E + M ++
Sbjct: 459 GLVEALGHAAMYEEAYVAFNMMTEIGSLPTIETYNSLANVFAKGGLFQEAESIFSRMTNS 518
Query: 269 QEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
+ + + AL+ Y + A + + ++ + PD R ++NAY +AG +
Sbjct: 519 AGIQKNKDSFDALIEAYCQGAQLDDAVKAYMEMRKSRFNPDERSLEGVLNAYCIAGVIDE 578
Query: 329 AYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
+ F+ ++ PS ++LS + ++ A + L +++ +
Sbjct: 579 SKEQFEEIQSNMAVPSIIAYCMMLSLYARNDRWADAYDLLEEMKTN 624
>gi|302801820|ref|XP_002982666.1| hypothetical protein SELMODRAFT_421954 [Selaginella moellendorffii]
gi|300149765|gb|EFJ16419.1| hypothetical protein SELMODRAFT_421954 [Selaginella moellendorffii]
Length = 796
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 88/195 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I YGK ++ A M+ + D T ++ +YS AG + E ++E++
Sbjct: 173 YNTLIKVYGKAHKLDEAWGYYKEMQDSRCVPDIFTFNTLMSLYSYAGQSEKVLEVYDEMQ 232
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+G LD+ Y +V + G LD +L M A+ + Y AL+ G +G E
Sbjct: 233 KIGCSLDRVGYEVVVPHAGKVGRLDLACMLFERMKAEGHQPNAVAYSALIAGQLKSGRLE 292
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
+ FE ++ I P A LI AY +G+ + F++M +P+ A ++
Sbjct: 293 IGTKYFEEMRSLEIRPLLGTFASLIEAYCKSGRLETGLKFFKDMEAFNYKPNLCIYAALV 352
Query: 353 SACEKENQLNRALEF 367
A K L+ ALEF
Sbjct: 353 DAHAKAGMLDAALEF 367
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 2/208 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ GK ++ A MK G + V + ++ K+G L++ + FEE++
Sbjct: 243 YEVVVPHAGKVGRLDLACMLFERMKAEGHQPNAVAYSALIAGQLKSGRLEIGTKYFEEMR 302
Query: 233 LLG-EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
L PL ++ S++ AY ++G L+ G ++M+A +Y AL+ ++ G
Sbjct: 303 SLEIRPL-LGTFASLIEAYCKSGRLETGLKFFKDMEAFNYKPNLCIYAALVDAHAKAGML 361
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALI 351
+ A +E ++ G+ + A+LI + AG+++ A ++ MR GL PS ++
Sbjct: 362 DAALEFYERMRGVGLWLPPLIFAVLIEQHAQAGKAETAVRLYREMRGVGLRPSHFTCRIV 421
Query: 352 LSACEKENQLNRALEFLIDLERDGFMVG 379
+ A K + + L +++ G V
Sbjct: 422 VGAVAKGGKYDDVERILFEMQEMGLNVA 449
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/213 (19%), Positives = 91/213 (42%), Gaps = 1/213 (0%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
E + N Y+ +I G K +++ M+ T ++ Y K+G L+
Sbjct: 269 EGHQPNAVAYSALIAGQLKSGRLEIGTKYFEEMRSLEIRPLLGTFASLIEAYCKSGRLET 328
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
+ F++++ + Y ++V A+ +AGMLD M +++ ++ L+
Sbjct: 329 GLKFFKDMEAFNYKPNLCIYAALVDAHAKAGMLDAALEFYERMRGVGLWLPPLIFAVLIE 388
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
++ G +E A R++ ++ G+ P C +++ A G+ M++ GL
Sbjct: 389 QHAQAGKAETAVRLYREMRGVGLRPSHFTCRIVVGAVAKGGKYDDVERILFEMQEMGLNV 448
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+D I+ + + +++ A E + + GF
Sbjct: 449 ADAVNDSIVKLVD-DKRISDAWELFLKVTGHGF 480
>gi|15233259|ref|NP_188222.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274469|sp|Q9LW84.1|PP236_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16010
gi|9294448|dbj|BAB02667.1| unnamed protein product [Arabidopsis thaliana]
gi|332642241|gb|AEE75762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 642
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 79/182 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+ GK + + A +K VM+ + K G L A + F E+K
Sbjct: 447 YCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMK 506
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +++ V+AGM++ LLR+M+ + +L G++ G
Sbjct: 507 NQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPR 566
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +FE I+ +GI PD L+ + AG ++A + M+ G E + IL
Sbjct: 567 RAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSIL 626
Query: 353 SA 354
A
Sbjct: 627 DA 628
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 80/168 (47%), Gaps = 1/168 (0%)
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREM-DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEA 300
+Y S+++ ++ G ++ + EM + + + + Y AL+ Y G ++ A R+F+
Sbjct: 199 TYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDE 258
Query: 301 IQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQ 360
++ + P ++ L+ Y G+ +KA F+ M++AG P+ ++ K +
Sbjct: 259 MKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGR 318
Query: 361 LNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGL 408
++ A F D+ RDG L ++G VEE+ +V E G+
Sbjct: 319 VDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGM 366
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 80/204 (39%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I GY K +++ A L M +GF ++ KA + A E F+E+K
Sbjct: 412 YSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELK 471
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ R Y M+ + + G L L EM Q Y AL+ G G
Sbjct: 472 ENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMIN 531
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + ++ G D +++N + G ++A F+ ++ +G++P +L
Sbjct: 532 EANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLL 591
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
A + +++ GF
Sbjct: 592 GCFAHAGMFEEAARMMREMKDKGF 615
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 91/237 (38%), Gaps = 1/237 (0%)
Query: 170 IRDYTKIIHG-YGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+ Y +I + K + + MK + T ++++ Y K ++ A
Sbjct: 373 VVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLL 432
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
EE+ G P +Y S++ A +A + L +E+ V S VY +++ +
Sbjct: 433 EEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKC 492
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G A +F ++ G PD L++ AG +A + + M + G
Sbjct: 493 GKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSH 552
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+IL+ + RA+E ++ G TL F G+ EE ++RE
Sbjct: 553 NIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMRE 609
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 74/171 (43%), Gaps = 1/171 (0%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKL 233
++++ G+ + A + K R T +++M + G + E + E+
Sbjct: 166 SELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCN 225
Query: 234 LGEPL-DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G+ D +Y +++ +Y + G D L EM + ++Y LL Y G E
Sbjct: 226 EGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVE 285
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
A +FE ++ AG +P LI AG+ +AY +++M + GL P
Sbjct: 286 KALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTP 336
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 119/301 (39%), Gaps = 10/301 (3%)
Query: 120 LSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQV----AELALLEESFEANIRDYTK 175
LS A R KP + + +V+ L LM+ + +V E+ + F I Y+
Sbjct: 182 LSVFYQAKGRKCKPTSSTYNSVI--LMLMQEGQHEKVHEVYTEMCNEGDCFPDTIT-YSA 238
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
+I Y K + +A MK + T ++ +Y K G ++ A + FEE+K G
Sbjct: 239 LISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAG 298
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
+Y ++ +AG +D ++M + L+ G E
Sbjct: 299 CSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELT 358
Query: 296 RVFEAIQFAGITPDARMCALLINA-YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSA 354
VF + TP +I A ++ + + F M+ + PS+ ++++
Sbjct: 359 NVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDG 418
Query: 355 CEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRETYSK 414
K N++ +AL L +++ GF A C+L + E + +E L+E +
Sbjct: 419 YCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKE--LKENFGN 476
Query: 415 I 415
+
Sbjct: 477 V 477
>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like, partial [Brachypodium distachyon]
Length = 907
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 114/245 (46%), Gaps = 3/245 (1%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E + N+ Y ++ GY + Q + A L +++ +G + VT T++V Y K G ++
Sbjct: 192 EMGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRME 251
Query: 223 MAEETFEEIKLLGE-PLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
AE+ +EIK + +D+ +YG+++ Y + G ++ + EM V V VY +
Sbjct: 252 EAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTM 311
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+ GY G +++ +A ++ G+ D L++ Y G KA+ M + G
Sbjct: 312 INGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGF 371
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASC-TLAAWFKRLGVVEEVE 400
+ +L+ ++ AL+ + + G +V E SC TL F + G E+
Sbjct: 372 TGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRG-VVPNEISCSTLLDGFFKAGKTEQAL 430
Query: 401 HVLRE 405
++ +E
Sbjct: 431 NLWKE 435
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 90/192 (46%), Gaps = 7/192 (3%)
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
+AG++ A F++++ G D + M AY R G + L+EM+ + V
Sbjct: 141 QAGDIGTAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLV 200
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
Y A++ GY G +E A+++ ++Q G++P+ LL+ Y G+ ++A + +
Sbjct: 201 AYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEI 260
Query: 337 RKAGLEPSDKCV--ALILSACEKE--NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKR 392
++ D+ ALI C++ NR + +ID G V T+ + +
Sbjct: 261 KENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDA---GVQVNMFVYNTMINGYCK 317
Query: 393 LGVVEEVEHVLR 404
LG + EVE +L+
Sbjct: 318 LGRMGEVEKLLQ 329
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/268 (20%), Positives = 113/268 (42%), Gaps = 16/268 (5%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESF--EANI 170
+SP T L+A W + + D A + +++E L + ++L F E +
Sbjct: 546 LSPNTVTYGALIAGWCK--EGNLHD--ACILYFEMVEKGLKPNLFICSVLVSCFYREGKV 601
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICD----------QVTLTVMVVMYSKAGN 220
+ ++ IQ+ + L + + I + ++ ++++ K G
Sbjct: 602 DEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGR 661
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A FE++K+ G D +Y S++ +G +D L EM + + Y +
Sbjct: 662 VADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNS 721
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G + N A +F +Q GI+P+A LI+ + G + +A+ Q M K G
Sbjct: 722 LIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEG 781
Query: 341 LEPSDKCVALILSACEKENQLNRALEFL 368
++P+ +++ + + A++ L
Sbjct: 782 IQPTVFTYTILIHGLCTQGYMEEAIKLL 809
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 96/245 (39%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ F Y +++G+ + I +A M +RG + ++++ + ++ + KAG
Sbjct: 366 MVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGK 425
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A ++E G + + +++ + + E L M S Y+
Sbjct: 426 TEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRT 485
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ GY G+ A ++ ++ G P M I +A QS K M G
Sbjct: 486 LIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKG 545
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
L P+ +++ KE L+ A ++ G L + F R G V+E
Sbjct: 546 LSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEAN 605
Query: 401 HVLRE 405
VL++
Sbjct: 606 LVLQK 610
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 68/149 (45%), Gaps = 7/149 (4%)
Query: 267 DAQEVY----VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQM 322
D EVY + + LLR ++ G + A VF+ + AG R C L+N
Sbjct: 82 DLVEVYKDFSFSAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQ 141
Query: 323 AGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEA 382
AG A FQ MR AG P D VA++ A ++ ++ A +FL ++E G V A
Sbjct: 142 AGDIGTAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVA 201
Query: 383 SCTLAAWFKRLG---VVEEVEHVLREYGL 408
+ + R+G V ++ H L+ GL
Sbjct: 202 YHAVMDGYCRIGQTEVARKLLHSLQVKGL 230
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 74/175 (42%)
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL 221
L N+ +I+G K ++ AE MK CD +T ++ Y K G+L
Sbjct: 437 LARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDL 496
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
A + E++ LG + S + A + + EM A+ + + Y AL
Sbjct: 497 GRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGAL 556
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
+ G+ GN A ++ + G+ P+ +C++L++ + G+ +A Q +
Sbjct: 557 IAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKL 611
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 76/174 (43%), Gaps = 1/174 (0%)
Query: 170 IRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFE 229
+R ++++ + I A M+ G + D T+ +M Y + G + A + +
Sbjct: 129 LRSCNRLLNQLVQAGDIGTAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLK 188
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
E++ +G ++ +Y +++ Y R G + LL + + + Y L++GY G
Sbjct: 189 EMEEMGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEG 248
Query: 290 NSEGAQRVFEAI-QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
E A++V + I + I D LIN Y G+ + A M AG++
Sbjct: 249 RMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQ 302
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 29/148 (19%), Positives = 61/148 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L NI Y +I+G K + A + ++ +G + +T ++ + K GN
Sbjct: 707 MLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGN 766
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A + +++ G +Y ++ G ++ LL +M V Y
Sbjct: 767 TTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWT 826
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITP 308
L++GY+ GN + +++ + G+ P
Sbjct: 827 LIQGYARCGNMKAITKLYNEMHICGLLP 854
>gi|255660900|gb|ACU25619.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 481
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 112/243 (46%), Gaps = 6/243 (2%)
Query: 141 VLKQLKLMEHPL-YLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR 199
VL K EH L + + E + L FE N + KII G+ ++ +A LL M ++
Sbjct: 18 VLHSSKTSEHALQFFRWVERSNL---FEHNRETHLKIIEILGRASKLNHARCILLDMPKK 74
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G D+ +M+ Y K G ++ + + F++++ LG +SY ++ +R G
Sbjct: 75 GLEWDEDMWVMMIDSYGKZGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMA 134
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+ +M ++ + + ++ G+ ++G E A R FE ++ I+PD IN
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTXING 194
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
Y + ++A F M+ +EP+ ++ +Q++ AL + +++ GF +
Sbjct: 195 YYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDXALRLVEEMK--GFGIK 252
Query: 380 KEA 382
A
Sbjct: 253 PNA 255
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 84/202 (41%), Gaps = 8/202 (3%)
Query: 163 EESFEANIRDYT---KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
E E I+ Y K+I G+ M + N +L+ G + T VM+ + +G
Sbjct: 108 ELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLS---EGIEPTRHTFNVMIWGFFLSG 164
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A FE++K D +Y + + Y R ++ E EM + + Y
Sbjct: 165 KVETANRFFEDMKSREISPDVVTYNTXINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYT 224
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L++GY + A R+ E ++ GI P+A + L+ A + +A + M
Sbjct: 225 TLIKGYVSVDQVDXALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDK 284
Query: 340 GLEPSDKCV--ALILSACEKEN 359
L P+D + LI S C N
Sbjct: 285 YLAPTDNSIFMRLISSHCXSGN 306
>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 909
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 103/244 (42%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
E N Y +IH K+ I++A M+ +G ++ Y K G+L A
Sbjct: 392 LEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRAR 451
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+ G SY ++ R G L L REM + + + + AL+ G+
Sbjct: 452 GLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGF 511
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
+ + A R+F+ + + + P+ ++I Y + G +KA+ + M + GL+P +
Sbjct: 512 CKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDN 571
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++S + +++A EF+ DLE ++ + L F R G E H+ E
Sbjct: 572 YTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDE 631
Query: 406 YGLR 409
+R
Sbjct: 632 MAVR 635
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/214 (19%), Positives = 92/214 (42%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E N +T +I+G+ K ++ A M I ++VT VM+ Y GN++
Sbjct: 494 ERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIR 553
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A + ++++ +G D +Y S++ + + + +++ + + ALL
Sbjct: 554 KAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALL 613
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G+ G +++ + G+ D +++ A +K+ F+ M++ G++
Sbjct: 614 YGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVK 673
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
P D ++ A KE + +AL + DG+
Sbjct: 674 PDDIFYTCMIDALSKEENMIQALNCWDQMVVDGY 707
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 101/246 (41%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
E +A+ Y +++G K M++Q A M G D+VT +V + + L+M
Sbjct: 250 EGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEM 309
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A ++ LG + + M+ + +++ L ++ + Y AL+
Sbjct: 310 ALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALID 369
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
N + A R+F+ + G+ P+ A+LI+A G + A F MR G++
Sbjct: 370 KLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKV 429
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+ +++ K+ L+RA L + ++G + L A R G + +
Sbjct: 430 TVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELH 489
Query: 404 REYGLR 409
RE R
Sbjct: 490 REMAER 495
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 5/205 (2%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I K+ + A N M G+ + VT TV++ K+G L AE +E+
Sbjct: 679 YTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEM- 737
Query: 233 LLGEPL-DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV-YKALLRGYSMNGN 290
L G L +K +Y + + G +++ + L M + ++ S V + L++G G
Sbjct: 738 LAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM--LQGHLASIVSFNILIKGLCKAGK 795
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
+ A + I +G +PD + +I+ G KA+ + M GL+P +
Sbjct: 796 IQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNI 855
Query: 351 ILSACEKENQLNRALEFLIDLERDG 375
+ C + ++AL ++ R G
Sbjct: 856 FIRWCNVHGESDKALGIYTNMIRSG 880
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 68/168 (40%)
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G +Q T + ++ K +A + F+++ G LD+ Y + + AY + LD
Sbjct: 181 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 240
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
L+ M+++ V + Y L+ G N + A V + G+T D L+
Sbjct: 241 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 300
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
+ + + A +M + G PS+ + ++ K+ + A
Sbjct: 301 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSL 348
Score = 38.1 bits (87), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 31/184 (16%), Positives = 77/184 (41%), Gaps = 1/184 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + + N +T +I+ K + +AE M + ++ T + ++ G+
Sbjct: 702 MVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGD 761
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ A++ + L G S+ ++ +AG + L+ ++ Y
Sbjct: 762 MEKAKDLHSAM-LQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYST 820
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G+ A ++ + + G+ PD + I + G+S KA + NM ++G
Sbjct: 821 IIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSG 880
Query: 341 LEPS 344
++P+
Sbjct: 881 VQPN 884
Score = 38.1 bits (87), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 40/227 (17%), Positives = 89/227 (39%), Gaps = 35/227 (15%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMV-------------VMYSKAG 219
Y +++G+ + +++ A M R GF+ + + M+ + K G
Sbjct: 294 YRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLG 353
Query: 220 NLKM----------------------AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLD 257
+L M A+ F+E+ G ++ +Y ++ A + GM++
Sbjct: 354 DLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIE 413
Query: 258 RGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
L +M + + V Y +L+ GY G+ + A+ + + G+TP A + LI
Sbjct: 414 DALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLI 473
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
G + M + G+ ++ +++ K+ +++ A
Sbjct: 474 AGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEA 520
>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 104/243 (42%), Gaps = 3/243 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ YT +I + I A+ M G +Q T+M+ + K G K E +
Sbjct: 141 NVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELY 200
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+++KL+G + +Y S++ Y R G L + E+ + V + Y L+ G
Sbjct: 201 QKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRK 260
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G A+ + E ++ A I P R +L++ GQ KA + + ++ GL P+
Sbjct: 261 GQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTY 320
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE---EVEHVLRE 405
+++S K + E + ++E G K L F R +E E+ H+++
Sbjct: 321 NILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKR 380
Query: 406 YGL 408
GL
Sbjct: 381 IGL 383
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 94/208 (45%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
N Y +I G +K Q+ AE L MKR T +++ G L A
Sbjct: 245 CNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSY 304
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
E++KL+G +Y ++ + + G L+REM+ + + Y L+ +
Sbjct: 305 LEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVR 364
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
+ + E A +F ++ G+ PD +LI+ + G +A +++M + L+P+D
Sbjct: 365 SDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVI 424
Query: 348 VALILSACEKENQLNRALEFLIDLERDG 375
+++ KE +AL+FL ++ ++G
Sbjct: 425 YNTMINGYCKECNSYKALKFLEEMVKNG 452
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 80/188 (42%), Gaps = 7/188 (3%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G+ K + M+ RG +VT T+++ + ++ +++ A E F +K
Sbjct: 320 YNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMK 379
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+G D+ +YG ++ G + L + M + +Y ++ GY NS
Sbjct: 380 RIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSY 439
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + E + G+TP+ I G+S +A + M +AGL+P +
Sbjct: 440 KALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLKEMTEAGLKPPE------- 492
Query: 353 SACEKENQ 360
S C K Q
Sbjct: 493 SLCSKVGQ 500
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 4/189 (2%)
Query: 160 ALLEESFEANI----RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
LLE A+I R + ++ G Q+ A + L +K G VT +++ +
Sbjct: 268 GLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGF 327
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
SK GN + E E++ G K +Y ++ +VR+ +++ + M +
Sbjct: 328 SKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQ 387
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
Y L+ G + GN A ++++++ + P+ + +IN Y S KA +
Sbjct: 388 HTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEE 447
Query: 336 MRKAGLEPS 344
M K G+ P+
Sbjct: 448 MVKNGVTPN 456
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 82/191 (42%), Gaps = 3/191 (1%)
Query: 214 MYSKAGNLKMAEETFEEIKLLGEP-LDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY 272
+ +K+GNL F E LG D S+ + A+ G + +G LL +M+ V
Sbjct: 82 LLAKSGNLDRTWGFFTE--YLGRTQFDVYSFWITIKAFCENGNVSKGFELLAQMETMGVS 139
Query: 273 VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTA 332
+Y L+ NG+ + A+ +F + G+ + + ++IN + G + +
Sbjct: 140 PNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFEL 199
Query: 333 FQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKR 392
+Q M+ G+ P+ +++ ++ +L+ A + ++ + G L R
Sbjct: 200 YQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCR 259
Query: 393 LGVVEEVEHVL 403
G V + E +L
Sbjct: 260 KGQVSKAEGLL 270
>gi|410110137|gb|AFV61148.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
rubella]
Length = 440
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 101/224 (45%), Gaps = 12/224 (5%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E + Y +I YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 219 KNIEQTVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDR 278
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ + +M++AY RAG++ + LL E+ + + + +L
Sbjct: 279 AAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDTAIHILA 337
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + F MR G P
Sbjct: 338 G---AGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFP 394
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLA 387
+A++L+A K + ++A D +M +E C +
Sbjct: 395 DSNVIAVVLNAYGKLQEFDKA--------NDVYMEMQEVGCVFS 430
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 100/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + MK G + + + + ++ MY + A
Sbjct: 81 FTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEAL 140
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + M + L M + + LLR Y
Sbjct: 141 SVFSEMREIKCLLDLTTCNIMIDVYGQLSMAKEADKLFWGMRKMGIEPSVVSFNTLLRVY 200
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I +I Y + +KA Q M+ G+E
Sbjct: 201 ---GDAELFGEAIHLFRLMQRKNIEQTVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIE 257
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 258 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRL 317
Query: 403 LRE 405
L E
Sbjct: 318 LHE 320
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 100/237 (42%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + K A++ F
Sbjct: 119 NTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLSMAKEADKLF 178
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G S+ +++ Y A + L R M + + Y +++ Y
Sbjct: 179 WGMRKMGIEPSVVSFNTLLRVYGDAELFGEAIHLFRLMQRKNIEQTVVTYNSMIMIYGKT 238
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G+E
Sbjct: 239 LEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILF 298
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE +V R+
Sbjct: 299 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAG----AGRIEEATYVFRQ 351
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 73/172 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ A + L M++ D V + ++ + K + A F +K
Sbjct: 18 YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 77
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +M+ + +A + L+ EM V + Y LL Y N
Sbjct: 78 RSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFL 137
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF ++ D C ++I+ Y +++A F MRK G+EPS
Sbjct: 138 EALSVFSEMREIKCLLDLTTCNIMIDVYGQLSMAKEADKLFWGMRKMGIEPS 189
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 86/206 (41%), Gaps = 19/206 (9%)
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
F+E++ D+ +Y +++ + + G+ D L++M+ V +Y L+
Sbjct: 3 FDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRK 62
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
+ A +F ++ +G TPD +IN + A ++A + M+ AG+ P+
Sbjct: 63 LCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTS 122
Query: 348 VALILSACEKENQLNRALEF---------LIDLERDGFMVGKEASCTLAA------W-FK 391
+ +L+ + + AL L+DL M+ ++A W +
Sbjct: 123 YSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLSMAKEADKLFWGMR 182
Query: 392 RLGV---VEEVEHVLREYGLRETYSK 414
++G+ V +LR YG E + +
Sbjct: 183 KMGIEPSVVSFNTLLRVYGDAELFGE 208
>gi|218200855|gb|EEC83282.1| hypothetical protein OsI_28637 [Oryza sativa Indica Group]
Length = 662
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 89/195 (45%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
E + +I Y II G+ K I+ A+ L + RG + ++ Y + G++
Sbjct: 338 EGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISG 397
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A + E +K G +YGS++ AG+++ + + + V +G Y +++
Sbjct: 398 AIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQ 457
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
GY G A FE ++ GI+P+ L+ AY +G S++A F M +G+ P
Sbjct: 458 GYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIP 517
Query: 344 SDKCVALILSACEKE 358
+ +++ C ++
Sbjct: 518 DNITYGTLIARCSEK 532
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 112/268 (41%), Gaps = 3/268 (1%)
Query: 138 WLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMK 197
W L + K M+ +V + +L + E + Y +I G K +++ A M
Sbjct: 245 WFKTLNKGKYMKEAT--KVIQ-TMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMT 301
Query: 198 RRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLD 257
RRGF D T ++ Y G ++ +++K G D SYG+++ + +A +
Sbjct: 302 RRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIR 361
Query: 258 RGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
+ + L E+ + + +Y AL+ GY NG+ GA E ++ GI P L+
Sbjct: 362 KAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLM 421
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
AG ++A T F R+ ++ +++ K ++ A+ + ++ G
Sbjct: 422 YWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGIS 481
Query: 378 VGKEASCTLAAWFKRLGVVEEVEHVLRE 405
K TL + + G EE + E
Sbjct: 482 PNKLTYTTLMYAYSKSGNSEEASKLFDE 509
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L++ + N+ Y +I GYG+ I A + + MK G VT ++ AG
Sbjct: 370 LMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGL 429
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ A+ F + + L Y M+ Y + G + EM ++ + Y
Sbjct: 430 VEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTT 489
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
L+ YS +GNSE A ++F+ + +G+ PD LI
Sbjct: 490 LMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLI 526
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 49/108 (45%)
Query: 238 LDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRV 297
L++ SY +M+ A +AG +D G +L E+ + Y L+ +G E A R+
Sbjct: 9 LNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRL 68
Query: 298 FEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
++ G+TP +LIN + + Q M + G+ P++
Sbjct: 69 KGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNE 116
>gi|356515931|ref|XP_003526650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Glycine max]
Length = 461
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 1/197 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ + ++ K ++ A+ AMK + F+ D+ + ++++ + KA NL A E F
Sbjct: 146 NLAAFNGLLSALCKSNNVRKAQEIFDAMKGQ-FVPDEKSYSILLEGWGKAPNLPRAREVF 204
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E+ G D +YG MV +AG +D +++EMD S +Y L+ Y +
Sbjct: 205 REMVEAGCDPDVVTYGIMVDVLCKAGRVDEAVEVVKEMDVGNCRPTSFIYSVLVHTYGVE 264
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A F + GI D LI A+ + + + + M G+ P+ +
Sbjct: 265 HRIEDAIDTFLEMAKKGIKADVVAYNALIGAFCKVNKFKNVHRVLKEMESNGVAPNSRTC 324
Query: 349 ALILSACEKENQLNRAL 365
+I+S+ + Q +RA
Sbjct: 325 NVIISSMIGQGQTDRAF 341
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 122/281 (43%), Gaps = 8/281 (2%)
Query: 141 VLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRG 200
VLK+ + P + + E A + + +IR Y +I K Q Q + + AM+++G
Sbjct: 50 VLKRFENAGMPAF-RFFEWAEKQRGYSHSIRAYHLMIESLAKIRQYQIVWDLVSAMRKKG 108
Query: 201 FICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGE 260
+ + T +M+ Y++A + A TF + + ++ ++ A ++ + + +
Sbjct: 109 ML-NVETFCIMMRKYARANKVDEAVYTFNVMDKYDVVPNLAAFNGLLSALCKSNNVRKAQ 167
Query: 261 VLLREMDAQEVYVGSE-VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+ M Q +V E Y LL G+ N A+ VF + AG PD ++++
Sbjct: 168 EIFDAMKGQ--FVPDEKSYSILLEGWGKAPNLPRAREVFREMVEAGCDPDVVTYGIMVDV 225
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
AG+ +A + M P+ ++++ E+++ A++ +++ + G
Sbjct: 226 LCKAGRVDEAVEVVKEMDVGNCRPTSFIYSVLVHTYGVEHRIEDAIDTFLEMAKKGIKAD 285
Query: 380 KEASCTLAAWFKRLGVVEEVEHVLREYGLRETYSKIPGSRS 420
A L F ++ + V VL+E E+ P SR+
Sbjct: 286 VVAYNALIGAFCKVNKFKNVHRVLKEM---ESNGVAPNSRT 323
>gi|326520353|dbj|BAK07435.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 652
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 122/270 (45%), Gaps = 34/270 (12%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I +GK ++ A + + M+ G + VT + ++ ++ KAG L A + F
Sbjct: 371 NVVTYNTMIAIHGKALEDDKAGSLVQQMQASGIQPNAVTYSTVLSIWVKAGKLDRAAKLF 430
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE------------------ 270
++++ G +D Y +MV+AY RAG++ + + LLRE+ +
Sbjct: 431 DKLRESGTEMDPVLYQTMVVAYERAGLVSQSKRLLRELRHPDQAIPKETAMKILASAGRV 490
Query: 271 ----------VYVG----SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALL 316
V+ G V++A++ ++ N VF+ ++ G PD+ A+
Sbjct: 491 EEAAWLFRRAVHTGEVKDPSVHRAMMALFAKNRRHRSVVEVFDEMRKLGHLPDSETIAVT 550
Query: 317 INAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLI-DLERDG 375
+NAY + KA ++ +R+ G SD+ +LS + + ALE L+ +L D
Sbjct: 551 MNAYGKLKEFDKAAGLYRALREEGCVFSDRVHFQMLSLLGAQQDFD-ALERLVGELSHDP 609
Query: 376 FMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ +E A ++R +E ++ +
Sbjct: 610 SIDKRELYLVSAGVYERAYRFDEAAQIISQ 639
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 65/153 (42%), Gaps = 1/153 (0%)
Query: 243 YGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQ 302
Y ++ A RAG L LL EM A+ V Y LL + G+ + A ++
Sbjct: 122 YNLLLRAASRAGQLRLASGLLLEMRARGVAADGFSYSTLLAALTRAGHLDHALTFLPLME 181
Query: 303 FAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLN 362
+ PD + + LI+ AG + KA F +R AG+ P K ++A K + L
Sbjct: 182 ADAVAPDLVLFSNLIHLALRAGDAPKALALFSRLRAAGIRPDLKAYNAAIAAYCKSDLLR 241
Query: 363 RALEFLI-DLERDGFMVGKEASCTLAAWFKRLG 394
A L+ D+ DG E+ + A R G
Sbjct: 242 DAKRLLLHDVPADGVAPDAESYAPVLAALARRG 274
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 1/156 (0%)
Query: 206 VTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLRE 265
V +++ S+AG L++A E++ G D SY +++ A RAG LD L
Sbjct: 120 VPYNLLLRAASRAGQLRLASGLLLEMRARGVAADGFSYSTLLAALTRAGHLDHALTFLPL 179
Query: 266 MDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQ 325
M+A V ++ L+ G++ A +F ++ AGI PD + I AY +
Sbjct: 180 MEADAVAPDLVLFSNLIHLALRAGDAPKALALFSRLRAAGIRPDLKAYNAAIAAYCKSDL 239
Query: 326 SQKA-YTAFQNMRKAGLEPSDKCVALILSACEKENQ 360
+ A ++ G+ P + A +L+A + +
Sbjct: 240 LRDAKRLLLHDVPADGVAPDAESYAPVLAALARRGR 275
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 61/322 (18%), Positives = 117/322 (36%), Gaps = 80/322 (24%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ ++ + + +A L M+ D V + ++ + +AG+ A F ++
Sbjct: 157 YSTLLAALTRAGHLDHALTFLPLMEADAVAPDLVLFSNLIHLALRAGDAPKALALFSRLR 216
Query: 233 LLGEPLDKRSYGSMVMAYVRAGML-DRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG-- 289
G D ++Y + + AY ++ +L D +LL ++ A V +E Y +L + G
Sbjct: 217 AAGIRPDLKAYNAAIAAYCKSDLLRDAKRLLLHDVPADGVAPDAESYAPVLAALARRGRH 276
Query: 290 ---------------------------NSEG-------AQRVFEAIQFAGITPDARMCAL 315
N+ G A R+F +++ AG+ P
Sbjct: 277 LAAVSLFSHMRAVARVKPDLSVFNIVLNAYGQLDLARDADRLFWSMRRAGVPPSVVTYNT 336
Query: 316 LINAYQMAG-----------------------------------------QSQKAYTAFQ 334
++ Y AG + KA + Q
Sbjct: 337 MLRVYGDAGLFGEAVHLFGLMYSTASDGGTVVRPNVVTYNTMIAIHGKALEDDKAGSLVQ 396
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
M+ +G++P+ + +LS K +L+RA + L G + T+ ++R G
Sbjct: 397 QMQASGIQPNAVTYSTVLSIWVKAGKLDRAAKLFDKLRESGTEMDPVLYQTMVVAYERAG 456
Query: 395 VVEEVEHVLREYGLRETYSKIP 416
+V + + +LRE LR IP
Sbjct: 457 LVSQSKRLLRE--LRHPDQAIP 476
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 45/232 (19%), Positives = 91/232 (39%), Gaps = 38/232 (16%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+ +++ YG+ ++A+ +M+R G VT M+ +Y AG
Sbjct: 299 FNIVLNAYGQLDLARDADRLFWSMRRAGVPPSVVTYNTMLRVYGDAG------------- 345
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
L GE + +G M G + R V+ Y ++ + +
Sbjct: 346 LFGEAV--HLFGLMYSTASDGGTVVRPNVV--------------TYNTMIAIHGKALEDD 389
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + +Q +GI P+A + +++ + AG+ +A F +R++G E ++
Sbjct: 390 KAGSLVQQMQASGIQPNAVTYSTVLSIWVKAGKLDRAAKLFDKLRESGTEMDPVLYQTMV 449
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTL---------AAWFKRLGV 395
A E+ ++++ L +L + KE + + AAW R V
Sbjct: 450 VAYERAGLVSQSKRLLRELRHPDQAIPKETAMKILASAGRVEEAAWLFRRAV 501
>gi|302798857|ref|XP_002981188.1| hypothetical protein SELMODRAFT_420654 [Selaginella moellendorffii]
gi|300151242|gb|EFJ17889.1| hypothetical protein SELMODRAFT_420654 [Selaginella moellendorffii]
Length = 796
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 88/195 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I YGK ++ A M+ + D T ++ +YS AG + E ++E++
Sbjct: 173 YNTLIKVYGKAHKLDEAWGYYKEMQDSRCVPDIFTFNTLMSLYSYAGQSEKVLEVYDEMQ 232
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+G LD+ Y +V + G LD +L M A+ + Y AL+ G +G E
Sbjct: 233 KIGCSLDRVGYEVVVPHAGKVGRLDLACMLFERMKAEGHQPNAVAYSALIAGQLKSGRLE 292
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
+ FE ++ I P A LI AY +G+ + F++M +P+ A ++
Sbjct: 293 IGTKYFEEMRSLEIRPLLGTFASLIEAYCKSGRLETGLKFFKDMEAFNYKPNLCIYAALV 352
Query: 353 SACEKENQLNRALEF 367
A K L+ ALEF
Sbjct: 353 DAHAKAGMLDAALEF 367
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 2/208 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ GK ++ A MK G + V + ++ K+G L++ + FEE++
Sbjct: 243 YEVVVPHAGKVGRLDLACMLFERMKAEGHQPNAVAYSALIAGQLKSGRLEIGTKYFEEMR 302
Query: 233 LLG-EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
L PL ++ S++ AY ++G L+ G ++M+A +Y AL+ ++ G
Sbjct: 303 SLEIRPL-LGTFASLIEAYCKSGRLETGLKFFKDMEAFNYKPNLCIYAALVDAHAKAGML 361
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALI 351
+ A +E ++ G+ + A+LI + AG+++ A ++ MR GL PS ++
Sbjct: 362 DAALEFYERMRGVGLWLPPLIFAVLIEQHAQAGKAETAVRLYREMRGVGLRPSHFTCRIV 421
Query: 352 LSACEKENQLNRALEFLIDLERDGFMVG 379
+ A K + + L +++ G V
Sbjct: 422 VGAVAKGGKYDDVERILFEMQEMGLNVA 449
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/213 (19%), Positives = 91/213 (42%), Gaps = 1/213 (0%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
E + N Y+ +I G K +++ M+ T ++ Y K+G L+
Sbjct: 269 EGHQPNAVAYSALIAGQLKSGRLEIGTKYFEEMRSLEIRPLLGTFASLIEAYCKSGRLET 328
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
+ F++++ + Y ++V A+ +AGMLD M +++ ++ L+
Sbjct: 329 GLKFFKDMEAFNYKPNLCIYAALVDAHAKAGMLDAALEFYERMRGVGLWLPPLIFAVLIE 388
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
++ G +E A R++ ++ G+ P C +++ A G+ M++ GL
Sbjct: 389 QHAQAGKAETAVRLYREMRGVGLRPSHFTCRIVVGAVAKGGKYDDVERILFEMQEMGLNV 448
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+D I+ + + +++ A E + + GF
Sbjct: 449 ADAVNDSIVKLVD-DKRISDAWELFLKVTGHGF 480
>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g16710, mitochondrial; Flags: Precursor
gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 507
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 84/173 (48%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +IHG+ K ++++ M ++G + + +T TV++ Y G +A+E F ++
Sbjct: 331 YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMS 390
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
P D R+Y ++ G +++ ++ M +E+ + Y +++G G E
Sbjct: 391 SRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVE 450
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
A +F ++ G+ P+ +I+ + G +A + F+ M++ G P++
Sbjct: 451 DAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNE 503
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 109/248 (43%), Gaps = 6/248 (2%)
Query: 161 LLEESFEANIRDYTKIIHGY---GKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSK 217
+++ E N+ +T +I + GK M+ + N ++ M + +L + MY
Sbjct: 249 MMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMY-- 306
Query: 218 AGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
G L A + F ++ G ++ Y +++ + ++ ++ G + EM + V +
Sbjct: 307 -GLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTIT 365
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y L++GY + G + AQ VF + PD R +L++ G+ +KA F+ MR
Sbjct: 366 YTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMR 425
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
K ++ + +I+ K ++ A + L G T+ + F R G++
Sbjct: 426 KREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIH 485
Query: 398 EVEHVLRE 405
E + + ++
Sbjct: 486 EADSLFKK 493
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 113/273 (41%), Gaps = 18/273 (6%)
Query: 116 ETGNLSDLLAAWV------RFMKPRRADWLAVLKQL----KLME-HPLYLQVAELALLEE 164
E G D AAW+ R ++P + A++ KLME LY + ++++ +
Sbjct: 235 EIGRWGD--AAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPD 292
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA 224
F Y +I+G + A M+R G ++V T ++ + K+ ++
Sbjct: 293 VFT-----YGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDG 347
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
+ F E+ G + +Y ++ Y G D + + +M ++ Y LL G
Sbjct: 348 MKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDG 407
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
NG E A +FE ++ + + ++I G+ + A+ F ++ G++P+
Sbjct: 408 LCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPN 467
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDGFM 377
++S + ++ A ++ DGF+
Sbjct: 468 VITYTTMISGFCRRGLIHEADSLFKKMKEDGFL 500
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 90/215 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ FE ++ +T +++GY +I++A + GF + VT T ++ K +
Sbjct: 144 MMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRH 203
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A E F ++ G + +Y ++V G LLR+M + + + A
Sbjct: 204 LNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTA 263
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ + G A+ ++ + + PD LIN M G +A F M + G
Sbjct: 264 LIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNG 323
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
P++ ++ K ++ ++ ++ + G
Sbjct: 324 CYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKG 358
>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
Length = 603
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 107/245 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + ++ +I Y+ +I G K ++ A + M RG V T +V K G
Sbjct: 224 MIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGR 283
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ A +T +E++ +Y +V Y+ G +++ ++ EM ++ + Y
Sbjct: 284 IQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTM 343
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+ G E A++VFE + G PD ++I+ + G A + M KA
Sbjct: 344 FIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAA 403
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
++P+ +I+ K ++L ALE + +DG + T+ +L ++E
Sbjct: 404 VKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEAL 463
Query: 401 HVLRE 405
+LRE
Sbjct: 464 ELLRE 468
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 85/202 (42%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E + YT ++ G K +++ A + M R+G+ D + + ++ SKAG + A +
Sbjct: 195 EPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARK 254
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
+ + G P +Y S+V + G + ++EM + + + Y ++ GY
Sbjct: 255 LVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYI 314
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G E A V E + PD + I A G+ ++A F+ M + G +P
Sbjct: 315 GMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMH 374
Query: 347 CVALILSACEKENQLNRALEFL 368
+I+ KE + A L
Sbjct: 375 TYGIIIDNFCKEGSMAAATHVL 396
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 70/146 (47%), Gaps = 2/146 (1%)
Query: 142 LKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGF 201
L +LK M+ L L + E+ +E E +I Y+ IIHG GK + A + L M G
Sbjct: 453 LCKLKKMDEALEL-LREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGV 511
Query: 202 ICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEV 261
I D T T ++ + AG + A E EE+ G D +YG++V R+ +D
Sbjct: 512 IPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRSD-VDAAWD 570
Query: 262 LLREMDAQEVYVGSEVYKALLRGYSM 287
LL+EM +KA+ +G+ +
Sbjct: 571 LLQEMMRNGHTPNEFTFKAVEKGFRL 596
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 95/218 (43%), Gaps = 3/218 (1%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
++E+ + ++ Y II + K+ + A + L M + ++ T+++ + K+
Sbjct: 363 TMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSS 422
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMD--AQEVYVGSEV 277
L+ A E ++ I G +Y +++ A + +D LLREM +E+
Sbjct: 423 RLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVT 482
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y ++ G G E A + + G+ PD LI AG+ +A + M
Sbjct: 483 YSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEML 542
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
KAG+ P D ++ + + ++ A + L ++ R+G
Sbjct: 543 KAGIFPDDHTYGTLVQILCRSD-VDAAWDLLQEMMRNG 579
>gi|357125724|ref|XP_003564540.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Brachypodium distachyon]
Length = 652
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 120/274 (43%), Gaps = 34/274 (12%)
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA 224
S + N+ Y II +GK ++ + A + + M+ G + VT + ++ ++ KAG L A
Sbjct: 367 SVKPNVVTYNTIISIHGKSLEDEKAGSLVRDMQANGIQPNAVTYSTILSIWVKAGKLDRA 426
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE-------- 276
+ FE++ G +D Y +MV+AY RAG++ + + LLRE+ + +E
Sbjct: 427 AKLFEKLLESGTEIDPVLYQTMVVAYERAGLVSQAKRLLRELKDPAEGIPTETAISILAN 486
Query: 277 ------------------------VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARM 312
V++A++ ++ N VF+ ++ G PD+
Sbjct: 487 AGRVEEAAWLFRRAVNTGEVRDPSVHRAMMDLFAKNRRHRSVVEVFDEMRKLGHLPDSET 546
Query: 313 CALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLI-DL 371
A +NAY + KA ++ R+ G SD+ +LS + ALE L+ +L
Sbjct: 547 IATAMNAYGKLKEFDKAAMLYRASREEGCVFSDRVHFQMLSLLGAQKDFE-ALESLVSEL 605
Query: 372 ERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
D + +E A ++R +E ++ +
Sbjct: 606 SHDPSIDKRELYLVAAGVYERAYKFDEAAQIISQ 639
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 86/209 (41%), Gaps = 37/209 (17%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE------ 226
Y ++ + Q++ A LL M+ RG D + + ++ ++AG+L A
Sbjct: 121 YNLLLRAASRAGQLRLASGLLLEMRHRGVAADAFSYSTLLAALTRAGHLDHALTFLPLME 180
Query: 227 -----------------------------TFEEIKLLGEPLDKRSYGSMVMAYVRAGML- 256
F ++ G D ++Y + + AY ++ +L
Sbjct: 181 ADAVSPDLVLFSNLIHLALRGGDAPRALALFSRLRAAGIRPDLKAYNAAIAAYCKSDLLR 240
Query: 257 DRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQ-FAGITPDARMCAL 315
D +LL ++ A V +E Y +L + G A +F ++ A + PD + +
Sbjct: 241 DAKRLLLHDIPADGVAPDAESYSPILAALARRGRHLAAVSLFSHMRAVARVKPDLSVFNI 300
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
++NAY +++A F +MR+ G+ PS
Sbjct: 301 VLNAYGQLDLAREADRLFWSMRRTGVPPS 329
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 1/153 (0%)
Query: 243 YGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQ 302
Y ++ A RAG L LL EM + V + Y LL + G+ + A ++
Sbjct: 121 YNLLLRAASRAGQLRLASGLLLEMRHRGVAADAFSYSTLLAALTRAGHLDHALTFLPLME 180
Query: 303 FAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLN 362
++PD + + LI+ G + +A F +R AG+ P K ++A K + L
Sbjct: 181 ADAVSPDLVLFSNLIHLALRGGDAPRALALFSRLRAAGIRPDLKAYNAAIAAYCKSDLLR 240
Query: 363 RALEFLI-DLERDGFMVGKEASCTLAAWFKRLG 394
A L+ D+ DG E+ + A R G
Sbjct: 241 DAKRLLLHDIPADGVAPDAESYSPILAALARRG 273
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 94/219 (42%), Gaps = 33/219 (15%)
Query: 208 LTVMVVMYSKAGNLKMAEET---FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLR 264
L+V ++ + G L +A E F ++ G P +Y +M+ Y AG+
Sbjct: 295 LSVFNIVLNAYGQLDLAREADRLFWSMRRTGVPPSVVTYNTMLRVYGDAGLF-------- 346
Query: 265 EMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAG 324
G V+ L G + S+G + + P+ +I+ + +
Sbjct: 347 ---------GEAVH---LFGLMCSSASDG--------NGSSVKPNVVTYNTIISIHGKSL 386
Query: 325 QSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASC 384
+ +KA + ++M+ G++P+ + ILS K +L+RA + L G +
Sbjct: 387 EDEKAGSLVRDMQANGIQPNAVTYSTILSIWVKAGKLDRAAKLFEKLLESGTEIDPVLYQ 446
Query: 385 TLAAWFKRLGVVEEVEHVLREYGLRETYSKIPGSRSIAL 423
T+ ++R G+V + + +LRE L++ IP +I++
Sbjct: 447 TMVVAYERAGLVSQAKRLLRE--LKDPAEGIPTETAISI 483
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/292 (20%), Positives = 122/292 (41%), Gaps = 21/292 (7%)
Query: 107 VKQIICVSPETGNLSDLLAAWVRFMK-PRRADWLAVLKQLKLMEHPLYLQVAELALLEES 165
+K + CV P+ + L+ + +F K PR ++ + +K
Sbjct: 350 MKDVGCV-PDIITYNGLINCYCKFEKMPRAFEYFSEMKN-------------------NG 389
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
+ N+ Y+ +I + K+ +Q A + M+R G + ++ T T ++ KAGNL A
Sbjct: 390 LKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAW 449
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+ ++ G L+ +Y +++ +AG + E + R M + +VY AL+ GY
Sbjct: 450 KLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGY 509
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
E A ++ + + I PD + +I + + ++ + M+ G+ +
Sbjct: 510 IKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANP 569
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
I+ A K + + AL F +++ G C L + G+VE
Sbjct: 570 VISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVE 621
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 112/247 (45%), Gaps = 5/247 (2%)
Query: 159 LALLEESFEANIRD----YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
+ +L++ E NI+ Y II G+ + +++ + L MK RG + V T ++
Sbjct: 519 MKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDA 578
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
Y KAG A F+E++ +G +Y ++ +AG+++ M + +
Sbjct: 579 YFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPN 638
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
VY +L+ G N E A+++F+ +Q G+TPD LI+ G Q+A
Sbjct: 639 VAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLIS 698
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEAS-CTLAAWFKRL 393
M + +E ++S + +L++A +F ++ G + + C L ++KR
Sbjct: 699 RMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRG 758
Query: 394 GVVEEVE 400
+ E +E
Sbjct: 759 QLDEAIE 765
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 102/264 (38%), Gaps = 11/264 (4%)
Query: 152 LYLQVAELALLEESFEA-----NIRDYTK------IIHGYGKKMQIQNAENTLLAMKRRG 200
L+ EL LLEE+ E N R K ++H K Q M G
Sbjct: 225 LFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAG 284
Query: 201 FICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGE 260
T VM+ K G+L+ + F +++ +G D +Y S++ Y + G L+
Sbjct: 285 IAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVA 344
Query: 261 VLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAY 320
L EM Y L+ Y A F ++ G+ P+ + LI+A+
Sbjct: 345 SLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAF 404
Query: 321 QMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGK 380
G Q A F +MR+ GL P++ ++ A K L A + L D+ + G +
Sbjct: 405 CKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNI 464
Query: 381 EASCTLAAWFKRLGVVEEVEHVLR 404
L + G + E E V R
Sbjct: 465 VTYTALLDGLCKAGRMIEAEEVFR 488
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 101/237 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y +I K+ ++N+ + M+ G D VT ++ Y K G+L+ F
Sbjct: 288 SVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLF 347
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E+K +G D +Y ++ Y + + R EM + Y L+ +
Sbjct: 348 NEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKE 407
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G +GA ++F ++ G+ P+ LI+A AG +A+ +M +AG++ +
Sbjct: 408 GMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTY 467
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+L K ++ A E + +DG ++ L + + +E+ +L++
Sbjct: 468 TALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQ 524
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 96/217 (44%), Gaps = 5/217 (2%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
L++Q+ E+ L ++ Y +I GYGK ++ + MK G + D +T +
Sbjct: 311 LFVQMREMGL-----SPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGL 365
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ Y K + A E F E+K G + +Y +++ A+ + GM+ L +M +
Sbjct: 366 INCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGL 425
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
Y +L+ GN A ++ + AG+ + L++ AG+ +A
Sbjct: 426 LPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEE 485
Query: 332 AFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFL 368
F++M K G+ P+ + ++ K ++ A++ L
Sbjct: 486 VFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKIL 522
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 92/215 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L+ + NI YT ++ G K ++ AE +M + G +Q T +V Y KA
Sbjct: 455 MLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAER 514
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ A + +++ D YGS++ + L+ +++L EM ++ + +
Sbjct: 515 MEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTT 574
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ Y G S A F+ +Q G+ +LI+ AG + A F M G
Sbjct: 575 IIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLG 634
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
L+P+ ++ K N + A + +++ G
Sbjct: 635 LQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRG 669
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 1/153 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + N+ YT +I G K I++A+ M+ RG D T ++ K GN
Sbjct: 630 MLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGN 689
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ A + L D Y S+V + + G L + EM + + +
Sbjct: 690 LQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCIC 749
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAG-ITPDARM 312
LLR Y G + A + ++ G IT A M
Sbjct: 750 LLREYYKRGQLDEAIELKNEMERMGLITESATM 782
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 52/132 (39%)
Query: 274 GSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAF 333
GS V+ L + G E A F ++ P AR C L++ +G Q F
Sbjct: 218 GSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFF 277
Query: 334 QNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRL 393
+M AG+ PS +++ KE L + + + G +L + ++
Sbjct: 278 NDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKV 337
Query: 394 GVVEEVEHVLRE 405
G +EEV + E
Sbjct: 338 GSLEEVASLFNE 349
>gi|224111048|ref|XP_002315730.1| predicted protein [Populus trichocarpa]
gi|222864770|gb|EEF01901.1| predicted protein [Populus trichocarpa]
Length = 760
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 140/330 (42%), Gaps = 12/330 (3%)
Query: 82 PNITEEQKQAISQFPR-KMTKRCKAFVKQIICVSPETGNLSDLLAAWVRFMKPRRADWLA 140
PN+ +E++ + PR K R ++ IIC + + L +R + P L
Sbjct: 61 PNVAQEKQ--YQRIPRAKQQHRSPEKLEDIICRMMANRDWTTRLQNSIRALVPEFDHSLV 118
Query: 141 --VLKQLKLMEHPL--YLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLA- 195
VL + +H L + V L++ E ++ KII G+ + +A +L
Sbjct: 119 YNVLHGARKPDHALQFFRWVERAGLIQHDRETHM----KIIQILGRYSMLNHARCIVLED 174
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M ++GF D+ +++ Y KAG ++ + + F ++K LG +SY ++ VR G
Sbjct: 175 MPKKGFELDEDMFVLLIDSYGKAGIVQESVKMFSKMKELGVERSVKSYNALFKVIVRKGR 234
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
+ +M + + Y L+ G+ ++ A R +E ++ GI+PD
Sbjct: 235 YMMAKRFFNKMLDEGIGPTRHTYNVLIWGFFLSMRLRTAVRFYEDMKVRGISPDVVTYNT 294
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+IN Y + ++A F M+ + P+ ++ +++N L L +++ G
Sbjct: 295 MINGYYRHKRMEEAEKLFAEMKAKDIAPTVISYTTMIKGYFAVDRINDGLRLLEEMKSVG 354
Query: 376 FMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
TL G + E + +L+E
Sbjct: 355 IKPNNVTYTTLLPDLCDAGKMTEAKDILKE 384
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 88/208 (42%), Gaps = 3/208 (1%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E E +++ Y + +K + A+ M G + T V++ + + L+
Sbjct: 212 ELGVERSVKSYNALFKVIVRKGRYMMAKRFFNKMLDEGIGPTRHTYNVLIWGFFLSMRLR 271
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A +E++K+ G D +Y +M+ Y R ++ E L EM A+++ Y ++
Sbjct: 272 TAVRFYEDMKVRGISPDVVTYNTMINGYYRHKRMEEAEKLFAEMKAKDIAPTVISYTTMI 331
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
+GY R+ E ++ GI P+ L+ AG+ +A + M + +
Sbjct: 332 KGYFAVDRINDGLRLLEEMKSVGIKPNNVTYTTLLPDLCDAGKMTEAKDILKEMVRRRIA 391
Query: 343 PSDKCVALIL--SACEKENQLNRALEFL 368
P D + L L S C K L A++ L
Sbjct: 392 PKDNSIFLKLLNSQC-KAGDLKAAVDVL 418
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 70/160 (43%), Gaps = 7/160 (4%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I Q AE + ++G + D + ++ ++K G + FE +K
Sbjct: 476 YNPVIQYLCSHGQTGKAEILFRQLLKKG-VEDPLAFNNLICGHAKEGT---PDSAFEILK 531
Query: 233 LLGE---PLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
++G P D +Y ++ +Y+R G + L M S V+++++ +G
Sbjct: 532 IMGRKGIPRDADAYRLLIESYLRKGEPADAKTALDSMIEDGHLPDSSVFRSVMESLYEDG 591
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
+ A RV +++ G+ + + A ++ A M G ++A
Sbjct: 592 RVQTASRVMKSMVEKGVKENMDLVAKILEALLMRGHEEEA 631
>gi|168063537|ref|XP_001783727.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664733|gb|EDQ51441.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 445
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/253 (19%), Positives = 109/253 (43%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N R + +I + + A N + M+ G D V+ + +++K G AE
Sbjct: 130 NDRTFNMLIKAWAHDKNPEKARNVISMMRAAGVGPDVVSYNTLAQLFAKLGKPWDAENVI 189
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++ + ++R+YG ++ Y+ AG +D L+ M + V+ L++GYS +
Sbjct: 190 TEMQNVYLRPNERTYGIVINGYIAAGQIDESLRLIERMKMDGISPTIAVFNHLVKGYSES 249
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
+VF+ ++ G+ PD + L++NA+ G +A M++ L+P
Sbjct: 250 MKPHKVDKVFKLMENFGVKPDVQTFGLIMNAWCSTGLIDEAKAVLLRMKEYDLQPDVMAY 309
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGL 408
++++ ++ + FL + + T+ + + L +++ V +E
Sbjct: 310 SILVKGYSRQGRPEEGEAFLNIMIDENLKPNVITYTTVISGYCSLAQMDDAMRVFQEMRS 369
Query: 409 RETYSKIPGSRSI 421
R + + R++
Sbjct: 370 RSVFPNMQTFRTL 382
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 98/235 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N R Y +I+GY QI + + MK G +V YS++ ++ F
Sbjct: 200 NERTYGIVINGYIAAGQIDESLRLIERMKMDGISPTIAVFNHLVKGYSESMKPHKVDKVF 259
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ ++ G D +++G ++ A+ G++D + +L M ++ Y L++GYS
Sbjct: 260 KLMENFGVKPDVQTFGLIMNAWCSTGLIDEAKAVLLRMKEYDLQPDVMAYSILVKGYSRQ 319
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G E + + + P+ +I+ Y Q A FQ MR + P+ +
Sbjct: 320 GRPEEGEAFLNIMIDENLKPNVITYTTVISGYCSLAQMDDAMRVFQEMRSRSVFPNMQTF 379
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
++ ++ RA E L + + GF E +A ++ +G E + VL
Sbjct: 380 RTLIWGFKEARWPRRAEEILEYIRKAGFTPDLECIELVADCWRSIGADGEADRVL 434
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 84/186 (45%), Gaps = 3/186 (1%)
Query: 193 LLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVR 252
L M+ I D + ++ Y +AG +K AE E+K G PL SY +++ Y
Sbjct: 48 LQQMEEDNVIPDAIFFNTLLNGYCEAGKMKEAEALVLEMKERGCPLITSSYNTLIKGYGL 107
Query: 253 AGMLDRGEVLLREMDAQEVYV--GSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDA 310
G + LL+EM A++V + L++ ++ + N E A+ V ++ AG+ PD
Sbjct: 108 DGQPEEAMKLLQEM-AKDVNSKPNDRTFNMLIKAWAHDKNPEKARNVISMMRAAGVGPDV 166
Query: 311 RMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLID 370
L + G+ A M+ L P+++ ++++ Q++ +L +
Sbjct: 167 VSYNTLAQLFAKLGKPWDAENVITEMQNVYLRPNERTYGIVINGYIAAGQIDESLRLIER 226
Query: 371 LERDGF 376
++ DG
Sbjct: 227 MKMDGI 232
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 78/188 (41%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ I + ++ GY + M+ + M+ G D T +++ + G +
Sbjct: 230 DGISPTIAVFNHLVKGYSESMKPHKVDKVFKLMENFGVKPDVQTFGLIMNAWCSTGLIDE 289
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A+ +K D +Y +V Y R G + GE L M + + Y ++
Sbjct: 290 AKAVLLRMKEYDLQPDVMAYSILVKGYSRQGRPEEGEAFLNIMIDENLKPNVITYTTVIS 349
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
GY + A RVF+ ++ + P+ + LI ++ A ++A + +RKAG P
Sbjct: 350 GYCSLAQMDDAMRVFQEMRSRSVFPNMQTFRTLIWGFKEARWPRRAEEILEYIRKAGFTP 409
Query: 344 SDKCVALI 351
+C+ L+
Sbjct: 410 DLECIELV 417
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 97/218 (44%), Gaps = 9/218 (4%)
Query: 132 KPRRADWLAVLKQL----KLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQ 187
+P + + +L L +L E PL LQ E E++ + + +++GY + +++
Sbjct: 22 RPAKETYTLLLSSLISDGRLGEGPLLLQQME----EDNVIPDAIFFNTLLNGYCEAGKMK 77
Query: 188 NAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEI-KLLGEPLDKRSYGSM 246
AE +L MK RG + ++ Y G + A + +E+ K + + R++ +
Sbjct: 78 EAEALVLEMKERGCPLITSSYNTLIKGYGLDGQPEEAMKLLQEMAKDVNSKPNDRTFNML 137
Query: 247 VMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGI 306
+ A+ ++ ++ M A V Y L + ++ G A+ V +Q +
Sbjct: 138 IKAWAHDKNPEKARNVISMMRAAGVGPDVVSYNTLAQLFAKLGKPWDAENVITEMQNVYL 197
Query: 307 TPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
P+ R ++IN Y AGQ ++ + M+ G+ P+
Sbjct: 198 RPNERTYGIVINGYIAAGQIDESLRLIERMKMDGISPT 235
>gi|384247843|gb|EIE21328.1| TPR-like protein, partial [Coccomyxa subellipsoidea C-169]
Length = 309
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 91/196 (46%)
Query: 181 GKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDK 240
G + +++A + M+ RG C+ T + ++ + K G L++A + F ++++ G +
Sbjct: 5 GHRQALRHALGLVGEMRTRGIACNTHTYSALMNVAIKCGELELALDVFHQLQVDGLRANV 64
Query: 241 RSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEA 300
+Y +++ Y + G V + Q + + + ++ +M G + A RVF+
Sbjct: 65 VTYNTLIDIYGKLGRWQDAIVADITLMWQGLEPEARTFNTIIIACNMCGQPQEALRVFDI 124
Query: 301 IQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQ 360
+ G TP A LI+A+ A + A FQ M + G E S + ++ CEK +
Sbjct: 125 MTARGFTPTATTYTALISAHAKADRLDHALATFQRMAEEGCERSVITYSALIGTCEKAGR 184
Query: 361 LNRALEFLIDLERDGF 376
AL+ + RDG
Sbjct: 185 WRLALDLFAQMGRDGI 200
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 69/169 (40%)
Query: 156 VAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
VA++ L+ + E R + II Q Q A M RGF T T ++ +
Sbjct: 85 VADITLMWQGLEPEARTFNTIIIACNMCGQPQEALRVFDIMTARGFTPTATTYTALISAH 144
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
+KA L A TF+ + G +Y +++ +AG L +M + +
Sbjct: 145 AKADRLDHALATFQRMAEEGCERSVITYSALIGTCEKAGRWRLALDLFAQMGRDGIAPNT 204
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAG 324
+Y A + + +E A+ +F A++ + PDA L A Q G
Sbjct: 205 AIYNAAMSACAQGACAEEARAIFTAMKRSTCRPDALTHTALATACQRCG 253
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 39/203 (19%), Positives = 81/203 (39%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ AN+ Y +I YGK + Q+A + + +G + T +++ + G +
Sbjct: 58 DGLRANVVTYNTLIDIYGKLGRWQDAIVADITLMWQGLEPEARTFNTIIIACNMCGQPQE 117
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F+ + G +Y +++ A+ +A LD + M + Y AL+
Sbjct: 118 ALRVFDIMTARGFTPTATTYTALISAHAKADRLDHALATFQRMAEEGCERSVITYSALIG 177
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G A +F + GI P+ + ++A +++A F M+++ P
Sbjct: 178 TCEKAGRWRLALDLFAQMGRDGIAPNTAIYNAAMSACAQGACAEEARAIFTAMKRSTCRP 237
Query: 344 SDKCVALILSACEKENQLNRALE 366
+ +AC++ AL+
Sbjct: 238 DALTHTALATACQRCGDWAGALK 260
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 55/145 (37%), Gaps = 3/145 (2%)
Query: 262 LLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQ 321
L+ EM + + + Y AL+ G E A VF +Q G+ + LI+ Y
Sbjct: 16 LVGEMRTRGIACNTHTYSALMNVAIKCGELELALDVFHQLQVDGLRANVVTYNTLIDIYG 75
Query: 322 MAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKE 381
G+ Q A A + GLEP + I+ AC Q AL + GF
Sbjct: 76 KLGRWQDAIVADITLMWQGLEPEARTFNTIIIACNMCGQPQEALRVFDIMTARGF---TP 132
Query: 382 ASCTLAAWFKRLGVVEEVEHVLREY 406
+ T A + ++H L +
Sbjct: 133 TATTYTALISAHAKADRLDHALATF 157
>gi|302753732|ref|XP_002960290.1| hypothetical protein SELMODRAFT_73828 [Selaginella moellendorffii]
gi|300171229|gb|EFJ37829.1| hypothetical protein SELMODRAFT_73828 [Selaginella moellendorffii]
Length = 546
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 107/237 (45%), Gaps = 4/237 (1%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E N+ Y I+ +G +Q + A + M++RG + VT + ++ +Y K G A
Sbjct: 269 EPNVITYNTILFLHGLTLQHEKAMRLVRKMQQRGIEPNAVTYSTLISIYGKTGKYDRAAF 328
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
F+ ++ G +D+ Y SM++ Y RAG++ + LL E+ ++ L +
Sbjct: 329 LFKTLREKGFEMDEILYQSMIVVYERAGLVAHAKRLLEELKQPDIVPRDTAISILAKAEK 388
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
+ E A +++ AG ++ +I + +S+ A F+NMR++G P +
Sbjct: 389 L----EEAAKLYWRSHEAGEIKESVTYKSMIQLFVRNKRSKNAIDVFENMRESGFLPDSE 444
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
++L+A + QL A + +D+ G + KE + + + E E +
Sbjct: 445 TTVVLLAAYGQLRQLEDAEKLYLDMRERGCTLEKEVHFQMLKLYGDARKIREAEDMF 501
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 108/236 (45%), Gaps = 4/236 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+ YGK + A+ L MK G + D V+ T+++ Y+++ A++ F E+K
Sbjct: 133 YNSMINLYGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLEAKQVFLEMK 192
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV--YKALLRGYSMNGN 290
G LD + M+ Y + M+ E L M ++ + + V Y +++ Y
Sbjct: 193 TKGIQLDVTTCNMMIDVYGKLEMVRDAEELFWSM-SKTLGIQQNVVTYNTMIKVYKEAEL 251
Query: 291 SEGAQRVFEAIQF-AGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
A VF +Q G+ P+ ++ + + Q +KA + M++ G+EP+ +
Sbjct: 252 LSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQHEKAMRLVRKMQQRGIEPNAVTYS 311
Query: 350 LILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++S K + +RA L GF + + ++ ++R G+V + +L E
Sbjct: 312 TLISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQSMIVVYERAGLVAHAKRLLEE 367
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 90/203 (44%), Gaps = 2/203 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEI- 231
YT +I+ Y + + A+ L MK +G D T +M+ +Y K ++ AEE F +
Sbjct: 168 YTILINAYAESQKYLEAKQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAEELFWSMS 227
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRG-EVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
K LG + +Y +M+ Y A +L V + V Y +L + +
Sbjct: 228 KTLGIQQNVVTYNTMIKVYKEAELLSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQ 287
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
E A R+ +Q GI P+A + LI+ Y G+ +A F+ +R+ G E +
Sbjct: 288 HEKAMRLVRKMQQRGIEPNAVTYSTLISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQS 347
Query: 351 ILSACEKENQLNRALEFLIDLER 373
++ E+ + A L +L++
Sbjct: 348 MIVVYERAGLVAHAKRLLEELKQ 370
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 111/249 (44%), Gaps = 7/249 (2%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+ E N Y+ +I YGK + A ++ +GF D++ M+V+Y +AG +
Sbjct: 300 QRGIEPNAVTYSTLISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQSMIVVYERAGLVA 359
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL-REMDAQEVYVGSEVYKAL 281
A+ EE+K +P D + + +A L+ L R +A E+ S YK++
Sbjct: 360 HAKRLLEELK---QP-DIVPRDTAISILAKAEKLEEAAKLYWRSHEAGEI-KESVTYKSM 414
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
++ + N S+ A VFE ++ +G PD+ +L+ AY Q + A + +MR+ G
Sbjct: 415 IQLFVRNKRSKNAIDVFENMRESGFLPDSETTVVLLAAYGQLRQLEDAEKLYLDMRERGC 474
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEH 401
+ +L ++ A + L+ +G + G E T+ ++R + E
Sbjct: 475 TLEKEVHFQMLKLYGDARKIREAEDMFAALKLEG-LDGDELYLTMIRIYERASKLNEASR 533
Query: 402 VLREYGLRE 410
+ E R+
Sbjct: 534 LFSEMKSRQ 542
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 86/221 (38%), Gaps = 47/221 (21%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
L L++ E L+ + F ++ +I GYG+ ++++A L M+ G D V + +
Sbjct: 47 LVLEMVEKDLVPDKF-----TFSTLISGYGRANRLEDAMGWLQEMEAGGIKPDLVIFSTL 101
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ + K + A F ++K G DK Y SM+ Y +A + LL EM
Sbjct: 102 IELAGKVKDYSKATSLFSKLKASGIAPDKVIYNSMINLYGKAKFYKEAQGLLAEMKE--- 158
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
AG+ PD +LINAY +SQK
Sbjct: 159 --------------------------------AGLMPDTVSYTILINAY---AESQKYLE 183
Query: 332 AFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLE 372
A ++ LE K + L ++ C + LE + D E
Sbjct: 184 A----KQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAE 220
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 74/165 (44%)
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
DK ++ +++ Y RA L+ L+EM+A + ++ L+ + A +F
Sbjct: 59 DKFTFSTLISGYGRANRLEDAMGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLF 118
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
++ +GI PD + +IN Y A ++A M++AGL P ++++A +
Sbjct: 119 SKLKASGIAPDKVIYNSMINLYGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAES 178
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+ A + ++++ G + + + +L +V + E +
Sbjct: 179 QKYLEAKQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAEELF 223
>gi|296087527|emb|CBI34116.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 92/216 (42%), Gaps = 16/216 (7%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE------- 225
YT +I G+ +M+++ AE+ + M G D ++ Y KAGNL A
Sbjct: 300 YTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMV 359
Query: 226 ---------ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
+ F+E + G LD+ Y +V A + G ++ LL EM + + +
Sbjct: 360 SNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVV 419
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
Y L+ GY + G A+ +FE ++ GI PD +L+ + G ++A +
Sbjct: 420 HYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCI 479
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLE 372
GL+P+ I+ ++ A FL LE
Sbjct: 480 GTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLE 515
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 96/238 (40%), Gaps = 39/238 (16%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG--------- 219
++ YT +I GY + ++ +A+N MK RG D VT ++V +S+ G
Sbjct: 417 DVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELL 476
Query: 220 --------------------NLKMAEETFEEIKLLGEPLDK--RSYGSMVMAYVRAGMLD 257
L MA + E L DK +Y +MV Y +A
Sbjct: 477 DCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLENYSAMVDGYCKANFTR 536
Query: 258 RGEVLLREMDAQ--------EVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPD 309
+ L + Q +V +Y L+ + +G+ + AQ VF+ + GITPD
Sbjct: 537 KAYELFSRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPD 596
Query: 310 ARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
++IN Y ++A F +M++ G++P ++L K N L A+
Sbjct: 597 VITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINL 654
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 92/225 (40%), Gaps = 28/225 (12%)
Query: 173 YTKIIHGY---GKKMQIQNAENTLLA-------------MKRRGFICDQVTLTVMVVMYS 216
Y +IH Y G +Q N +++ + G D+V ++V
Sbjct: 335 YGALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALC 394
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
K G ++ A E E+K LD Y +++ Y G L + + EM + +
Sbjct: 395 KLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIV 454
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
Y L+ G+S NG + A + + I G+ P++ +I MAG+ ++A AF N
Sbjct: 455 TYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEA-EAFLNT 513
Query: 337 RKAGLEPSDKCV----ALILSACEKENQLNRALEFLIDLERDGFM 377
+ DKC+ A++ C K N +A E L + G +
Sbjct: 514 LE------DKCLENYSAMVDGYC-KANFTRKAYELFSRLSKQGIL 551
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 77/204 (37%), Gaps = 35/204 (17%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
++ Y + A + L KRRGF+ ++ ++ + G + MA + +K LG
Sbjct: 163 LVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLG 222
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY----------------------- 272
+ +YG + A R G + + REM+ V
Sbjct: 223 LNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGY 282
Query: 273 ------------VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAY 320
+ + Y A++RG+ + A+ VF + GI PD + LI+AY
Sbjct: 283 EALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAY 342
Query: 321 QMAGQSQKAYTAFQNMRKAGLEPS 344
AG +A +M G++ +
Sbjct: 343 CKAGNLLQAVALHNDMVSNGIKTN 366
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 79/190 (41%), Gaps = 14/190 (7%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ + N + +II G +++ AE L ++ + C + + MV Y KA +
Sbjct: 482 QGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDK---CLE-NYSAMVDGYCKANFTRK 537
Query: 224 AEETFEEIKLLG---------EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
A E F + G EP ++ YG ++ A+ R G + R +++ + + +
Sbjct: 538 AYELFSRLSKQGILRMLALDVEP-NQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPD 596
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
Y ++ GY A+ +F ++ GI PD ++++ + Q A +
Sbjct: 597 VITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYD 656
Query: 335 NMRKAGLEPS 344
M GL+P
Sbjct: 657 EMIARGLQPD 666
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L+E ++ YT +I+GY + ++ A + MK RG D +T TV++ +SK N
Sbjct: 588 LVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNN 647
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMV 247
L+ A ++E+ G D +Y +++
Sbjct: 648 LQDAINLYDEMIARGLQPDIVTYTALL 674
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 55/126 (43%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
L +L E N Y K+I + + ++ A+ + RG D +T T+M+ Y +
Sbjct: 551 LRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRV 610
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
L+ A + F ++K G D +Y ++ + + L L EM A+ + Y
Sbjct: 611 NCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTY 670
Query: 279 KALLRG 284
ALL G
Sbjct: 671 TALLPG 676
>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
Length = 845
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 95/206 (46%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E + + R Y ++ ++ + + AE L M +G VT T ++ Y K G +
Sbjct: 282 ELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMS 341
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A E +KL G + +Y ++V + G + + LL +M A V + Y L+
Sbjct: 342 DALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLI 401
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
RG ++G+ E A R+ ++ G+ D LINA G++ +A + F ++ G++
Sbjct: 402 RGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIK 461
Query: 343 PSDKCVALILSACEKENQLNRALEFL 368
P+ +++ K + + A +FL
Sbjct: 462 PNAVTFNSLINGLCKSGKADIAWKFL 487
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 6/197 (3%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I ++ + A L M R G+ D T ++V Y + + +A + F+++
Sbjct: 156 YNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMP 215
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
L G D SY +++ AG +D L EMD +++ +Y AL++G E
Sbjct: 216 LRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQPDMH----MYAALVKGLCNAERGE 271
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS-DKCVALI 351
+ ++ G P R A +++ ++++A Q M + GL P C A+I
Sbjct: 272 EGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVI 331
Query: 352 LSACEKENQLNRALEFL 368
+ C KE +++ AL L
Sbjct: 332 NAYC-KEGRMSDALRVL 347
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 83/187 (44%), Gaps = 4/187 (2%)
Query: 161 LLEESFEAN----IRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS 216
+L+E FE + T +I+ Y K+ ++ +A L MK RG + T +V +
Sbjct: 311 MLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFC 370
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
G + A +++ G D +Y ++ G ++ LLR M+ +
Sbjct: 371 NEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQY 430
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
Y AL+ +G ++ A +F++++ GI P+A LIN +G++ A+ + M
Sbjct: 431 TYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKM 490
Query: 337 RKAGLEP 343
AG P
Sbjct: 491 VSAGCTP 497
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/290 (19%), Positives = 116/290 (40%), Gaps = 42/290 (14%)
Query: 154 LQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVV 213
L+V EL L + N+ Y ++ G+ + ++ A L M+ G D VT +++
Sbjct: 344 LRVLELMKLR-GCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIR 402
Query: 214 MYSKAGNLKMAEETFEEIKLL-GEPL--DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE 270
G++ E F ++L+ G+ L D+ +Y +++ A + G D+ L ++ +
Sbjct: 403 GQCIDGHI---ESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRG 459
Query: 271 VYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAY 330
+ + + +L+ G +G ++ A + E + AG TPD + I SQ+
Sbjct: 460 IKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGL 519
Query: 331 TAFQNMRKAGLEPSDKCVALIL---------------------SACEK------------ 357
+ M + ++PS +++ S C
Sbjct: 520 SFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAY 579
Query: 358 --ENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
E +LN A L+++ ++G V A TL +G + +L++
Sbjct: 580 CIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQ 629
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 49/259 (18%), Positives = 104/259 (40%), Gaps = 21/259 (8%)
Query: 131 MKPRRADWLAVLKQLKLMEHPLYLQVAEL--ALLEESFEANIRDYTKIIHGYGKKMQIQN 188
+KP ++ V+ KL++ Y VA ++ ++ YT + Y + ++
Sbjct: 530 VKPSTVNYTIVIH--KLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNE 587
Query: 189 AENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVM 248
AEN L+ M + G D + ++ ++ G A +++ + ++ +Y ++
Sbjct: 588 AENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLR 647
Query: 249 AYVR------------AGMLDRGEV-----LLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
VR AG+ E+ L M E S Y ++L G+S +G +
Sbjct: 648 HLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRT 707
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALI 351
E A + ++ I+ + + L+ + + + A+ +M + G P +
Sbjct: 708 EEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHL 767
Query: 352 LSACEKENQLNRALEFLID 370
LS E Q ++A E ++
Sbjct: 768 LSGLICEGQTDKAKEIFMN 786
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 63/155 (40%)
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
K AEE +E+ G + +++ AY + G + +L M + Y AL
Sbjct: 306 KEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNAL 365
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
++G+ G A + ++ G+ PDA LLI + G + A+ + M GL
Sbjct: 366 VQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGL 425
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+++A K+ + ++A LE G
Sbjct: 426 IADQYTYNALINALCKDGRTDQACSLFDSLETRGI 460
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 50/123 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L++ + + +YT +IH K+ T M G D VT T + Y G
Sbjct: 525 MLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGR 584
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L AE E+ G +D +Y +++ + G D +L++M + Y
Sbjct: 585 LNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFI 644
Query: 281 LLR 283
LLR
Sbjct: 645 LLR 647
>gi|357127910|ref|XP_003565620.1| PREDICTED: pentatricopeptide repeat-containing protein At5g57250,
mitochondrial-like [Brachypodium distachyon]
Length = 1088
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 110/275 (40%), Gaps = 30/275 (10%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L++ A++ +YT +I G ++ + L M+R G + +T T +V + K
Sbjct: 263 MLDKGIAADVVNYTTVIDGMCREGSVDKVMGFLDEMERSGAKPNLITYTSLVGGFCKRNR 322
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ A +++ G +D+ Y ++ + + G LD+ LL EM+ + + G+ Y
Sbjct: 323 LEDAFSVVRKLEQKGVVVDEYVYSILIDSLCKMGDLDKAFCLLGEMEGKGIKAGTVTYNT 382
Query: 281 LLRGYSMNGNSEGAQRVFEAI------------------------------QFAGITPDA 310
++ G G++ A + + + + +GI D
Sbjct: 383 VIDGLCKAGDTNNAIEISQGVAADNFTYSMLLHGCIKGEDSTGIMAIKSRLESSGIAVDV 442
Query: 311 RMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLID 370
C +LI A M + A + F MR GL P+ I++ K + RA+E +
Sbjct: 443 VTCNILIKALFMVNKMDDACSLFHRMRDMGLSPNTVTYHTIINMMCKLGDIGRAVELFDE 502
Query: 371 LERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++D + G L G V E + +
Sbjct: 503 YKKDKSLSGTAVHNVLIGALCNGGKVNIAEQIFYD 537
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 59/131 (45%), Gaps = 14/131 (10%)
Query: 251 VRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDA 310
+ AG+ D G VL Y A++ S G+ GA +VF + G D
Sbjct: 117 LSAGVEDHGAVL-----------SPSTYHAMVSVLSDRGDMAGALKVFGIMTERGCQVDD 165
Query: 311 RMCALLINAYQMAGQSQKAYTAFQNMRK--AGLEPSDKCVALILSACEKENQLNRALEFL 368
R+C+ +++ + AG + + +RK G EP + +++ +E ++ E +
Sbjct: 166 RVCSAIVSGFSKAGNDKAGLEFYDRVRKEVCGFEPGLMTLTAVVNLLGREGKIGEVAELV 225
Query: 369 IDLERDGFMVG 379
++E+ G M+G
Sbjct: 226 SEMEQKG-MIG 235
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 39/200 (19%), Positives = 85/200 (42%), Gaps = 4/200 (2%)
Query: 135 RADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLL 194
R A+ K+ ++++ +L+ AE + F ++ Y+ ++ G + ++ A +
Sbjct: 688 RGAVYALKKEGEILDAYNFLEQAE----QSGFSVDLAMYSIVVEGLCRGGYLEKALDLCE 743
Query: 195 AMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG 254
M++ G + ++ + G A F+ ++ +Y ++ A R G
Sbjct: 744 TMQKEGIHPTIIVHNSVLSGLCQHGCFTEAFRLFDYLESSNILPTIITYAILIGALCREG 803
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
LD L+++M + + + VY L+ GY G +E A + + + PDA
Sbjct: 804 FLDDAYQLIQKMSNKGIRPTTRVYNLLISGYCNYGLTEKALGLMSHFEEHFLLPDAFTLG 863
Query: 315 LLINAYQMAGQSQKAYTAFQ 334
+IN + + G ++ A F
Sbjct: 864 SVINGHCLKGNTEAALGFFN 883
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 85/212 (40%), Gaps = 2/212 (0%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK--LLGEPLDKRSYGSMVMAYVRA 253
M RG D + +V +SKAGN K E ++ ++ + G + ++V R
Sbjct: 156 MTERGCQVDDRVCSAIVSGFSKAGNDKAGLEFYDRVRKEVCGFEPGLMTLTAVVNLLGRE 215
Query: 254 GMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
G + L+ EM+ + + + Y +L+ GY G R + GI D
Sbjct: 216 GKIGEVAELVSEMEQKGMIGDAVFYSSLVHGYMTGGLLMEGLREHRLMLDKGIAADVVNY 275
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
+I+ G K M ++G +P+ ++ K N+L A + LE+
Sbjct: 276 TTVIDGMCREGSVDKVMGFLDEMERSGAKPNLITYTSLVGGFCKRNRLEDAFSVVRKLEQ 335
Query: 374 DGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
G +V + L ++G +++ +L E
Sbjct: 336 KGVVVDEYVYSILIDSLCKMGDLDKAFCLLGE 367
>gi|224126121|ref|XP_002329666.1| predicted protein [Populus trichocarpa]
gi|222870547|gb|EEF07678.1| predicted protein [Populus trichocarpa]
Length = 821
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 107/244 (43%), Gaps = 1/244 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLL-AMKRRGFICDQVTLTVMVVMYSKAGNL 221
E + Y ++ YGK + N LL M+ +G D+ T + ++ + G L
Sbjct: 237 ESGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSKGLGFDEFTCSTVISACGREGLL 296
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
A+E F +K G +Y +++ + +AG+ +++EM+ + Y L
Sbjct: 297 DEAKEFFVGLKSQGYAPGTVTYNALLQVFGKAGIYSEALSIMKEMEDNNCPPDAVTYNEL 356
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+ Y G E + + + GI P+A +INAY A Q KA + + M+++G
Sbjct: 357 VAAYVRAGFYEEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGC 416
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEH 401
P+ IL K++Q ++ L D++ DG + T+ + G+ + V+
Sbjct: 417 APNVCTYNAILGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHKYVKR 476
Query: 402 VLRE 405
V +E
Sbjct: 477 VFQE 480
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 88/198 (44%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+ E + N YT +I+ YG+ Q+ A + MK G + T ++ M K
Sbjct: 375 TMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAILGMLGKKS 434
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ + ++K+ G ++ ++ +M+ GM + + +EM + + +
Sbjct: 435 QSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEMKSCGFEPDRDTFN 494
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ G+ A+++++ + AG TP L+NA G + A + ++M+
Sbjct: 495 TLITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNALLNALARRGDWRTAESVIKDMKNK 554
Query: 340 GLEPSDKCVALILSACEK 357
G +PS+ +LIL++ K
Sbjct: 555 GFKPSETSYSLILNSYAK 572
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 80/203 (39%), Gaps = 36/203 (17%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D + +M + + +A + F+ I L LD R+Y +++ +Y R G +R
Sbjct: 173 DNQAVELMARILGRESQHSIASKLFDVIPLDDYSLDVRAYTTILHSYSRCGKYER----- 227
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
A +FE + +G++P ++++ Y
Sbjct: 228 ------------------------------AVAIFEKMNESGLSPTLVTYNVMLDVYGKM 257
Query: 324 GQS-QKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEA 382
G+S K MR GL + + ++SAC +E L+ A EF + L+ G+ G
Sbjct: 258 GRSWNKILGLLDEMRSKGLGFDEFTCSTVISACGREGLLDEAKEFFVGLKSQGYAPGTVT 317
Query: 383 SCTLAAWFKRLGVVEEVEHVLRE 405
L F + G+ E +++E
Sbjct: 318 YNALLQVFGKAGIYSEALSIMKE 340
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 68/179 (37%)
Query: 190 ENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMA 249
E A+++ G+ D V M+ M+S+ A E I+ G D +Y S++
Sbjct: 615 ERAFQALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNSLMDL 674
Query: 250 YVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPD 309
Y R G + E +LRE+ Y +++G+ G A R + GI P
Sbjct: 675 YARGGECWKAEEILRELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEMISRGIRPC 734
Query: 310 ARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFL 368
+ Y G + M K P++ +++ K + A++F+
Sbjct: 735 IVTYNTFVGGYAAKGMFAEIDEVLSYMTKHDCRPNELTYKIVVDGYCKAKKFKEAMDFV 793
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 42/233 (18%), Positives = 90/233 (38%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +++ Y + + + M G + VT T M+ Y +A + A ++++K
Sbjct: 353 YNELVAAYVRAGFYEEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMK 412
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +Y +++ + + +L +M + +L G +
Sbjct: 413 ESGCAPNVCTYNAILGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHK 472
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
+RVF+ ++ G PD LI A G A + M +AG PS +L
Sbjct: 473 YVKRVFQEMKSCGFEPDRDTFNTLITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNALL 532
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+A + A + D++ GF + + + + + G V+ + + ++
Sbjct: 533 NALARRGDWRTAESVIKDMKNKGFKPSETSYSLILNSYAKGGYVKGINRIEKD 585
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 49/273 (17%), Positives = 107/273 (39%)
Query: 133 PRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENT 192
P R W +L Y++ + FE + + +I G+ +AE
Sbjct: 453 PNRITWNTMLSMCGNKGMHKYVKRVFQEMKSCGFEPDRDTFNTLITASGRCGSDIDAEKI 512
Query: 193 LLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVR 252
M GF T ++ ++ G+ + AE +++K G + SY ++ +Y +
Sbjct: 513 YDEMLEAGFTPSVATYNALLNALARRGDWRTAESVIKDMKNKGFKPSETSYSLILNSYAK 572
Query: 253 AGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARM 312
G + + +++ ++ + + L+ G +R F+A+Q G PD +
Sbjct: 573 GGYVKGINRIEKDIYDGHIFPSWMLLRTLILANFKCRALAGMERAFQALQKHGYKPDLVV 632
Query: 313 CALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLE 372
+++ + +A+ +++ GL+P ++ + + +A E L +L+
Sbjct: 633 FNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNSLMDLYARGGECWKAEEILRELQ 692
Query: 373 RDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
G + T+ F R G++ E L E
Sbjct: 693 NSGDKSDLISYNTVIKGFCRQGLMHEALRTLSE 725
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 32/170 (18%), Positives = 73/170 (42%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
AL + ++ ++ + ++ + +K A + ++ G D VT ++ +Y++ G
Sbjct: 620 ALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNSLMDLYARGG 679
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
AEE E++ G+ D SY +++ + R G++ L EM ++ + Y
Sbjct: 680 ECWKAEEILRELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEMISRGIRPCIVTYN 739
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
+ GY+ G V + P+ ++++ Y A + ++A
Sbjct: 740 TFVGGYAAKGMFAEIDEVLSYMTKHDCRPNELTYKIVVDGYCKAKKFKEA 789
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 44/249 (17%), Positives = 100/249 (40%), Gaps = 12/249 (4%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+LE F ++ Y +++ ++ + AE+ + MK +GF + + ++++ Y+K G
Sbjct: 516 MLEAGFTPSVATYNALLNALARRGDWRTAESVIKDMKNKGFKPSETSYSLILNSYAKGGY 575
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGS------MVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
+K ++I D + S +++A + L E + +
Sbjct: 576 VKGINRIEKDI------YDGHIFPSWMLLRTLILANFKCRALAGMERAFQALQKHGYKPD 629
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
V+ ++L +S + A + IQ G+ PD L++ Y G+ KA +
Sbjct: 630 LVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNSLMDLYARGGECWKAEEILR 689
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
++ +G + ++ ++ ++ AL L ++ G T + G
Sbjct: 690 ELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEMISRGIRPCIVTYNTFVGGYAAKG 749
Query: 395 VVEEVEHVL 403
+ E++ VL
Sbjct: 750 MFAEIDEVL 758
>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
Length = 475
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 91/198 (45%)
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA 224
E ++ Y + G + ++ A+N L M +G + V+ T ++ ++ G++ A
Sbjct: 272 GIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEA 331
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
F E+ G +Y M+ Y++ G + E EM+ + + Y AL+ G
Sbjct: 332 RRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHG 391
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
+ +NG + A R+FE ++ G P+ LI+ G+S++A+ + NM GL P
Sbjct: 392 HCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPD 451
Query: 345 DKCVALILSACEKENQLN 362
D + ++ + + + N
Sbjct: 452 DALYSALVGSLHTDKKQN 469
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/301 (20%), Positives = 114/301 (37%), Gaps = 27/301 (8%)
Query: 89 KQAISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRF--------------MKPR 134
KQA + P +T + V C S + LL R R
Sbjct: 55 KQAATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTR 114
Query: 135 RADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLL 194
D V + LK+ME+ E E + YT ++ G I E
Sbjct: 115 EKDDDRVAEMLKVMEN-------------EGIEPTVGTYTILVDGLSAARDITKVEAVFE 161
Query: 195 AMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG 254
MK + D + ++ Y +AGN++ A E F+E G ++ +YG+++ + + G
Sbjct: 162 EMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIG 221
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
++ E+L+ +M + V + V+ ++ GY + A + ++ GI D
Sbjct: 222 QMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYN 281
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
L + A + +A + M + G+ P+ ++S E + A ++ +
Sbjct: 282 TLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGN 341
Query: 375 G 375
G
Sbjct: 342 G 342
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 97/206 (47%), Gaps = 3/206 (1%)
Query: 206 VTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLRE 265
++ +V+V Y K+G + A + +E+ G ++ Y S++ AY R DR +L+
Sbjct: 68 LSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKV 127
Query: 266 MDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQ 325
M+ + + Y L+ G S + + VFE ++ ++ D + +INAY AG
Sbjct: 128 MENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGN 187
Query: 326 SQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCT 385
++A F G+EP++ +++ K Q+ A + D++ G + + T
Sbjct: 188 VRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNT 247
Query: 386 LAAWFKRLGVVE---EVEHVLREYGL 408
+ + R +V+ E++ ++ + G+
Sbjct: 248 MIDGYCRKNMVDKALEIKMIMEKMGI 273
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 102/247 (41%), Gaps = 35/247 (14%)
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA 224
E N Y +I+G+ K Q++ AE + M+ RG +Q+ M+ Y + + A
Sbjct: 202 GIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKA 261
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM------------------ 266
E ++ +G LD +Y ++ RA +D + LLR M
Sbjct: 262 LEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISI 321
Query: 267 --------DAQEVY-----VGSE----VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPD 309
+A+ ++ G+E Y ++ GY G+ A+R ++ G+ PD
Sbjct: 322 HCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPD 381
Query: 310 ARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLI 369
A L++ + + G+ A F+ M++ G +P+ ++S KE + A +
Sbjct: 382 IYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYD 441
Query: 370 DLERDGF 376
++ DG
Sbjct: 442 NMLGDGL 448
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 88/233 (37%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ Y ++ L M+ G T T++V S A ++ E FEE+K
Sbjct: 105 YNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMK 164
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
D Y S++ AY RAG + R + E + Y AL+ G+ G E
Sbjct: 165 SKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQME 224
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ + +Q G+ + + +I+ Y KA M K G+E +
Sbjct: 225 AAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLA 284
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ N+++ A L + G + TL + G + E + RE
Sbjct: 285 CGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFRE 337
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 71/159 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E+ N YT +I + + + A M G VT VM+ Y K G+
Sbjct: 303 MIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGS 362
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ AE E++ G D SY ++V + G +D L EM + Y A
Sbjct: 363 IREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTA 422
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
L+ G + G SE A ++++ + G+TPD + + L+ +
Sbjct: 423 LISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGS 461
>gi|221503780|gb|EEE29464.1| PPR repeat-containing protein, putative [Toxoplasma gondii VEG]
Length = 1116
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 96/205 (46%), Gaps = 4/205 (1%)
Query: 155 QVAELAL--LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMV 212
Q+A L+ L ES + +++ +I A + L M R GF D+ + ++
Sbjct: 571 QLAPLSFQSLLESGRGSTKNFNSLIKAKVFFSDTAAALDVLEKMARHGFPPDEESFVHLI 630
Query: 213 VMYSKAGNLKMAEETFEEIK-LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
++ G+ A F +++ L P R Y +++ A+V A L LLR+M+ + +
Sbjct: 631 GGAARRGDSACARMLFLKMRATLSSPPSARVYAALIQAHVAAQDLPSAFALLRKMEDEHI 690
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQ-FAGITPDARMCALLINAYQMAGQSQKAY 330
VY L+ G A R F ++ + G+ PD + ++I A + G++++A
Sbjct: 691 PADCVVYTVLIDGLVRAKKIRKAWRTFWTMRTWKGLEPDEVLFTVMIKACAVRGEAERAI 750
Query: 331 TAFQNMRKAGLEPSDKCVALILSAC 355
+MR +GL P+D A ++ AC
Sbjct: 751 NLLDDMRASGLHPTDVTYAELMHAC 775
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 87/205 (42%), Gaps = 16/205 (7%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKR-RGFICDQVTLTVMVVMYSKAGNL 221
+E A+ YT +I G + +I+ A T M+ +G D+V TVM+ + G
Sbjct: 687 DEHIPADCVVYTVLIDGLVRAKKIRKAWRTFWTMRTWKGLEPDEVLFTVMIKACAVRGEA 746
Query: 222 KMAEETFEEIKLLG-EPLDKRSYGSMVMAYV-RAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ A ++++ G P D +Y ++ A R + +M A+++ + VY
Sbjct: 747 ERAINLLDDMRASGLHPTDV-TYAELMHACCDRKDFASKCFHFYHQMLAEDMPITLPVYA 805
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA------------GQSQ 327
LLR + GN + A+ V + ++ + M L+I + A +
Sbjct: 806 FLLRACAAQGNVKRAKDVVRQMVRENVSFSSYMYTLVIRVFASAMRLPRVSDAERIANLR 865
Query: 328 KAYTAFQNMRKAGLEPSDKCVALIL 352
A+ Q+MR G+E K + +L
Sbjct: 866 YAWHLVQDMRAKGVEIETKTLNALL 890
>gi|255660940|gb|ACU25639.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 484
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 112/237 (47%), Gaps = 6/237 (2%)
Query: 141 VLKQLKLMEHPL-YLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR 199
VL K EH L + + E + L FE N + KII G+ ++ +A LL M ++
Sbjct: 18 VLHSAKNSEHALQFFRWVERSNL---FEHNRETHLKIIEILGRASKLNHARCILLDMPKK 74
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G D+ +M+ Y KAG ++ + + F++++ LG +SY ++ +R G
Sbjct: 75 GLEWDEDLWVLMIDSYGKAGIVQESVKMFQKMEELGVERTIKSYDALFKVILRRGRYMMA 134
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+ +M ++ + + ++ G+ ++G E A R FE ++ I PD ++N
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMMWGFFLSGKVETANRFFEDMKSREIMPDVVTYNTMVNG 194
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
Y + ++A F M+ +EP+ ++ ++++ AL F+ +++ GF
Sbjct: 195 YCRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALRFVEEMK--GF 249
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 101/248 (40%), Gaps = 14/248 (5%)
Query: 163 EESFEANIRDYT---KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
E E I+ Y K+I G+ M + N +L+ G + T VM+ + +G
Sbjct: 108 ELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLS---EGIEPTRHTFNVMMWGFFLSG 164
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A FE++K D +Y +MV Y R ++ E EM + + Y
Sbjct: 165 KVETANRFFEDMKSREIMPDVVTYNTMVNGYCRVKKMEEAEKYFVEMKGRNIEPTVVTYT 224
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L++GY + A R E ++ G+ P+A + L+ A + +A + + M
Sbjct: 225 TLIKGYVSVDRVDDALRFVEEMKGFGMKPNAITYSTLLPGLCNAEKMSEARSILKEMVDK 284
Query: 340 GLEPSDKCV--ALILSACE------KENQLNRALEFLIDLERDGFMVGKEASCTLAAWFK 391
+ P+D + LI C+ N L + + E + V E C + K
Sbjct: 285 YIAPTDNSIFMRLISGQCKAGDLDAAANVLKAMIRLSVPTEAGHYGVLIENYCKAGEYDK 344
Query: 392 RLGVVEEV 399
+ ++++V
Sbjct: 345 AIKLLDKV 352
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 94/210 (44%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
MK RG D V+ + ++ Y G L+ + +E+++ G + +Y S+++ ++G
Sbjct: 1 MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
+D E +LREM Q + + VY L+ G+ GN + A ++F+ ++ I PD
Sbjct: 61 VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+I G+ +A F M G+EP + ++ K ++ +A + + G
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180
Query: 376 FMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
LA +LG V+ +L E
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHE 210
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 82/172 (47%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I G + ++ A+ M RG D+VT T ++ Y K+G ++ A ++
Sbjct: 118 YTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMV 177
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +Y ++ + G +D LL EM + + + Y +L+ G +GN
Sbjct: 178 QSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIR 237
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A ++ E ++ AG+ PD L++AY G+ KA+ + M GL+P+
Sbjct: 238 QAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPT 289
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 92/208 (44%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y+ +I+GY ++Q + M+ +G + T ++++ K+G + AE
Sbjct: 9 DVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVL 68
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E+ G D Y +++ + + G + L EM+ Q + Y A++ G
Sbjct: 69 REMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRC 128
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G A +VF + G+ PD LI+ Y +G+ +KA++ M ++GL P+
Sbjct: 129 GKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTY 188
Query: 349 ALILSACEKENQLNRALEFLIDLERDGF 376
+ K Q++ A E L ++ G
Sbjct: 189 TALADGLCKLGQVDTANELLHEMCGKGL 216
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 89/206 (43%), Gaps = 6/206 (2%)
Query: 136 ADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLA 195
AD L L Q+ L+ + + + NI Y +++G K I+ A +
Sbjct: 192 ADGLCKLGQVDTANELLH------EMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEE 245
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M+ G D +T T ++ Y K G + A E E+ G ++ ++ + +GM
Sbjct: 246 MEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGM 305
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
L+ GE LL M + + + Y +L++ Y + N +++ + G+ PD+ +
Sbjct: 306 LEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNI 365
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGL 341
LI + A ++A+ + M + G
Sbjct: 366 LIKGHCKARNMKEAWFLHKEMAEKGF 391
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 104/242 (42%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ + N+ Y II K ++ +AE L M +G + D V T ++ + K GN++
Sbjct: 39 KGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQA 98
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A + F+E++ D +Y +++ R G + + + +M ++ V Y L+
Sbjct: 99 AYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLID 158
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
GY +G E A + + +G+TP+ L + GQ A M GL+
Sbjct: 159 GYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQL 218
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+ +++ K + +A++ + ++E G TL + + G + + +L
Sbjct: 219 NICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELL 278
Query: 404 RE 405
RE
Sbjct: 279 RE 280
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 1/200 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ N+ YT + G K Q+ A L M +G + T +V K+GN
Sbjct: 176 MVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGN 235
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ A + EE+++ G D ++ +++ AY + G + + LLREM + + +
Sbjct: 236 IRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNV 295
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G+ M+G E +R+ + GI P+ L+ Y + + ++ M G
Sbjct: 296 LMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARG 355
Query: 341 LEP-SDKCVALILSACEKEN 359
+ P S+ LI C+ N
Sbjct: 356 VMPDSNTYNILIKGHCKARN 375
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 74/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I GY K +++ A + M + G + VT T + K G + A E E+
Sbjct: 153 YTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMC 212
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G L+ +Y S+V ++G + + L+ EM+ +Y + + L+ Y G
Sbjct: 213 GKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMV 272
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A + + G+ P +L+N + M+G + M + G+ P+
Sbjct: 273 KAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPN 324
>gi|357509511|ref|XP_003625044.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500059|gb|AES81262.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 521
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 98/212 (46%), Gaps = 12/212 (5%)
Query: 169 NIRDYTKIIHGY------GKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
N+ + +I GY G +++++ L M + G + VT ++ + K G L
Sbjct: 254 NVVTFNSLISGYCDKGLLGLALKVRD-----LMMGKNGVFPNVVTFNTLINGFCKEGKLH 308
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A F E+KL + +Y +++ + +AG + G L EM+ +V Y L+
Sbjct: 309 EANRVFSEMKLANVAPNVVTYNTLINGFGQAGNSEMGIGLFEEMERNKVKADILTYNGLI 368
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G G ++ A + + + + P+A + LI + S++A+ +++M ++G
Sbjct: 369 LGLCKEGKTKKAAYMVKELDKGNLVPNASTFSALIAGQCVRNNSERAFLVYRSMVRSGFS 428
Query: 343 PSDKCVALILSACEKENQLNRALEFLID-LER 373
P++ ++ SA K + A++ L D LER
Sbjct: 429 PNENTFRMLASAFCKNEDFDGAVQVLRDMLER 460
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 92/203 (45%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
L L+V +L + + N+ + +I+G+ K+ ++ A MK + VT +
Sbjct: 273 LALKVRDLMMGKNGVFPNVVTFNTLINGFCKEGKLHEANRVFSEMKLANVAPNVVTYNTL 332
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ + +AGN +M FEE++ D +Y +++ + G + +++E+D +
Sbjct: 333 INGFGQAGNSEMGIGLFEEMERNKVKADILTYNGLILGLCKEGKTKKAAYMVKELDKGNL 392
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
+ + AL+ G + NSE A V+ ++ +G +P+ +L +A+ A
Sbjct: 393 VPNASTFSALIAGQCVRNNSERAFLVYRSMVRSGFSPNENTFRMLASAFCKNEDFDGAVQ 452
Query: 332 AFQNMRKAGLEPSDKCVALILSA 354
++M + + P ++ + S
Sbjct: 453 VLRDMLERFMTPDSSILSEVYSG 475
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 91/442 (20%), Positives = 168/442 (38%), Gaps = 52/442 (11%)
Query: 11 RSYSAYQVFDEITAPKP-GLRLSWRNL-SLHRKPAKWSRSLRSGPALEAIKAEDMGKTQV 68
+++S Y T P+P G L + N+ H ++W + L K + + ++
Sbjct: 20 KTHSPYLPIPHRTLPQPKGQDLDFINIFHSHFIHSQWEKLTPFSKTLTPFKIQHI-LLKL 78
Query: 69 KDDTSM----FTWIQI-GPN-------------ITEEQ--KQAISQFPRKMTKRCKAFVK 108
++D + F W+Q PN +T+ + K A S F + +T F
Sbjct: 79 QNDAVLSLKFFNWVQTHNPNSHTLHTHSFLLHILTKNRNFKTAQSIFSKIITTNSNLFES 138
Query: 109 QI----ICVSPET---------GNLSDLLAAWVRFMKPRRADWLAVLKQLK-LMEHPLYL 154
+ +C S +++ L A F+K + + ++ + LYL
Sbjct: 139 LLHSYTLCNSSPLVFDTLFKTFAHMNKLRNATDTFVKMKEYGFFPTVESCNAFLSSMLYL 198
Query: 155 QVAELA------LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTL 208
+ EL + N+ ++ Y K ++ A L MK G + VT
Sbjct: 199 KRPELVVSFYRQMRRNRISPNVYTINMVVSAYCKLGELNKASEVLEKMKDMGLCPNVVTF 258
Query: 209 TVMVVMYSKAGNLKMAEETFEEIKLLGE----PLDKRSYGSMVMAYVRAGMLDRGEVLLR 264
++ Y G L +A + + ++G+ P + ++ +++ + + G L +
Sbjct: 259 NSLISGYCDKGLLGLALKVRD--LMMGKNGVFP-NVVTFNTLINGFCKEGKLHEANRVFS 315
Query: 265 EMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAG 324
EM V Y L+ G+ GNSE +FE ++ + D LI G
Sbjct: 316 EMKLANVAPNVVTYNTLINGFGQAGNSEMGIGLFEEMERNKVKADILTYNGLILGLCKEG 375
Query: 325 QSQKAYTAFQNMRKAGLEPSDKCV-ALILSACEKENQLNRALEFLIDLERDGFMVGKEAS 383
+++KA + + K L P+ ALI C + N RA + R GF +
Sbjct: 376 KTKKAAYMVKELDKGNLVPNASTFSALIAGQCVRNNS-ERAFLVYRSMVRSGFSPNENTF 434
Query: 384 CTLAAWFKRLGVVEEVEHVLRE 405
LA+ F + + VLR+
Sbjct: 435 RMLASAFCKNEDFDGAVQVLRD 456
>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
Length = 603
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 110/248 (44%), Gaps = 5/248 (2%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L++ E N+ ++T +I G K+ I+ A L M +G+ + T T ++ K G
Sbjct: 266 LVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGW 325
Query: 221 LKMAEETFEEIKLLGEPLDK---RSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
+ A F +KL+ K +Y +M+ Y R L+R E+LL M Q + +
Sbjct: 326 TEKAFRLF--LKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNT 383
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y L+ G+ GN E A + + G +P+ ++N G+ Q+AY ++
Sbjct: 384 YTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGF 443
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
+ GL+P +++S K+ + +AL + + G + TL A F R ++
Sbjct: 444 QNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMK 503
Query: 398 EVEHVLRE 405
E E E
Sbjct: 504 ESEMFFEE 511
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 81/182 (44%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
E F N+ Y I++G K+ ++Q A L + G D+ T +++ + K N++
Sbjct: 410 EGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQ 469
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F ++ +G D SY +++ + R + E+ E + ++ Y +++
Sbjct: 470 ALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMIC 529
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
GY GN A + F + G PD+ +I+ + +A + + +M + GL P
Sbjct: 530 GYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVP 589
Query: 344 SD 345
+
Sbjct: 590 CE 591
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 89/219 (40%), Gaps = 1/219 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N R II + ++ AE M RG D ++ VMVVMY K GN+ A++
Sbjct: 169 NTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYRVMVVMYCKIGNILEADKWL 228
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ G +D ++ ++ + G R R + + + ++ G
Sbjct: 229 SVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKR 288
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM-RKAGLEPSDKC 347
G+ + A + E + G P+ LI+ G ++KA+ F + R +P+
Sbjct: 289 GSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLT 348
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
++S +E++LNRA L ++ G + TL
Sbjct: 349 YTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTL 387
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 47/106 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L+ + +I YT +I + ++ +++ +E R G I T T M+ Y + GN
Sbjct: 477 MLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGN 536
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
L +A + F + G D +YG+++ + D L M
Sbjct: 537 LTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSM 582
>gi|302833221|ref|XP_002948174.1| hypothetical protein VOLCADRAFT_116752 [Volvox carteri f.
nagariensis]
gi|300266394|gb|EFJ50581.1| hypothetical protein VOLCADRAFT_116752 [Volvox carteri f.
nagariensis]
Length = 1001
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 79/183 (43%), Gaps = 4/183 (2%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E E +R Y +I Q + A + GF + T ++ Y K L
Sbjct: 242 HEGVEPVLRTYNTLIIACNMCNQPREALAVYQRLLSDGFTPNSTTYNALISAYGKTTQLG 301
Query: 223 MAEETFEEIKLLGEPLDKR--SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A E ++E +L + +D+ +Y S++ A +AG + + EM + + Y +
Sbjct: 302 KALEVYQE--MLRQNMDRSVITYSSLISACEKAGQWETALRIFNEMQQDKCVPNTVTYNS 359
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ + G E A VFE + G TPD LI+AY+ GQ QKA AF M G
Sbjct: 360 LVTACAQGGQWEKAAEVFEQMNAHGCTPDVVTYTALISAYERGGQWQKALQAFHKMCVQG 419
Query: 341 LEP 343
+P
Sbjct: 420 CKP 422
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 89/206 (43%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ YT I + A + M+ R + T T ++ + K G L +A + +
Sbjct: 143 DVYSYTATISLCIHGQDVDRALELMQEMRSRNIERNVHTYTALMNVCIKCGKLPLALDIY 202
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ + + +Y ++V Y + G +R +L M + V Y L+ +M
Sbjct: 203 NSMRAVNCMPNVVTYNTLVDVYGKLGQWERAIHVLDVMKHEGVEPVLRTYNTLIIACNMC 262
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
A V++ + G TP++ LI+AY Q KA +Q M + ++ S
Sbjct: 263 NQPREALAVYQRLLSDGFTPNSTTYNALISAYGKTTQLGKALEVYQEMLRQNMDRSVITY 322
Query: 349 ALILSACEKENQLNRALEFLIDLERD 374
+ ++SACEK Q AL ++++D
Sbjct: 323 SSLISACEKAGQWETALRIFNEMQQD 348
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 66/158 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
LL + F N Y +I YGK Q+ A M R+ +T + ++ KAG
Sbjct: 275 LLSDGFTPNSTTYNALISAYGKTTQLGKALEVYQEMLRQNMDRSVITYSSLISACEKAGQ 334
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A F E++ + +Y S+V A + G ++ + +M+A Y A
Sbjct: 335 WETALRIFNEMQQDKCVPNTVTYNSLVTACAQGGQWEKAAEVFEQMNAHGCTPDVVTYTA 394
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLIN 318
L+ Y G + A + F + G PDA + +I+
Sbjct: 395 LISAYERGGQWQKALQAFHKMCVQGCKPDAIVYNAIID 432
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 6/167 (3%)
Query: 216 SKAGNLKMAEETFEEIKLLGE--PL----DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQ 269
S+ G + A E F+ ++ E PL D SY + + + +DR L++EM ++
Sbjct: 114 SRLGKDRRAMELFDWLRSANERSPLRALCDVYSYTATISLCIHGQDVDRALELMQEMRSR 173
Query: 270 EVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
+ Y AL+ G A ++ +++ P+ L++ Y GQ ++A
Sbjct: 174 NIERNVHTYTALMNVCIKCGKLPLALDIYNSMRAVNCMPNVVTYNTLVDVYGKLGQWERA 233
Query: 330 YTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
M+ G+EP + ++ AC NQ AL L DGF
Sbjct: 234 IHVLDVMKHEGVEPVLRTYNTLIIACNMCNQPREALAVYQRLLSDGF 280
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 94/222 (42%), Gaps = 6/222 (2%)
Query: 159 LALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
L L++E + E N+ YT +++ K ++ A + +M+ + + VT +V +
Sbjct: 164 LELMQEMRSRNIERNVHTYTALMNVCIKCGKLPLALDIYNSMRAVNCMPNVVTYNTLVDV 223
Query: 215 YSKAGNLKMAEETFEEIKLLG-EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYV 273
Y K G + A + +K G EP+ R+Y ++++A + + + +
Sbjct: 224 YGKLGQWERAIHVLDVMKHEGVEPV-LRTYNTLIIACNMCNQPREALAVYQRLLSDGFTP 282
Query: 274 GSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAF 333
S Y AL+ Y A V++ + + + LI+A + AGQ + A F
Sbjct: 283 NSTTYNALISAYGKTTQLGKALEVYQEMLRQNMDRSVITYSSLISACEKAGQWETALRIF 342
Query: 334 QNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
M++ P+ +++AC + Q +A E + G
Sbjct: 343 NEMQQDKCVPNTVTYNSLVTACAQGGQWEKAAEVFEQMNAHG 384
>gi|410110143|gb|AFV61151.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
velutina]
Length = 382
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 101/212 (47%), Gaps = 4/212 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 174 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDR 233
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ + +M++AY RAG++ + LL E+ + + + +L
Sbjct: 234 AAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDTAIHILA 292
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +++ + F MR G P
Sbjct: 293 G---AGRIEEATYVFRQAVDAGEVKDITVFERMVHLLSKYKKYSNVVEVFDKMRGLGYFP 349
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDG 375
+A++L+A K + ++A + ++++ G
Sbjct: 350 DSDVIAIVLNAYGKLQEFDKANDVYMEMQEVG 381
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 102/237 (43%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 74 NTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 133
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 134 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 193
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G+E
Sbjct: 194 LEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILF 253
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE +V R+
Sbjct: 254 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGA----GRIEEATYVFRQ 306
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 102/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + MK G + + + + ++ MY + A
Sbjct: 36 FTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEAL 95
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 96 SVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 155
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + ++ Y + +KA Q M+ G+E
Sbjct: 156 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIE 212
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 213 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRL 272
Query: 403 LRE 405
L E
Sbjct: 273 LHE 275
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 60/141 (42%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D V + ++ + K + A F +K G D +Y +M+ + +A + L+
Sbjct: 4 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 63
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
EM V + Y LL Y N A VF ++ D C ++I+ Y
Sbjct: 64 SEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 123
Query: 324 GQSQKAYTAFQNMRKAGLEPS 344
G +++A F MRK G+EP+
Sbjct: 124 GMAKEADKLFWGMRKMGIEPN 144
>gi|221485853|gb|EEE24123.1| PPR repeat-containing protein, putative [Toxoplasma gondii GT1]
Length = 1113
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 96/205 (46%), Gaps = 4/205 (1%)
Query: 155 QVAELAL--LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMV 212
Q+A L+ L ES + +++ +I A + L M R GF D+ + ++
Sbjct: 568 QLAPLSFQSLLESGRGSTKNFNSLIKAKVFFSDTAAALDVLEKMARHGFPPDEESFVHLI 627
Query: 213 VMYSKAGNLKMAEETFEEIK-LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
++ G+ A F +++ L P R Y +++ A+V A L LLR+M+ + +
Sbjct: 628 GGAARRGDSACARMLFLKMRATLSSPPSARVYAALIQAHVAAQDLPSAFALLRKMEDEHI 687
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQ-FAGITPDARMCALLINAYQMAGQSQKAY 330
VY L+ G A R F ++ + G+ PD + ++I A + G++++A
Sbjct: 688 PADCVVYTVLIDGLVRAKKIRKAWRTFWTMRTWKGLEPDEVLFTVMIKACAVRGEAERAI 747
Query: 331 TAFQNMRKAGLEPSDKCVALILSAC 355
+MR +GL P+D A ++ AC
Sbjct: 748 NLLDDMRASGLHPTDVTYAELMHAC 772
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 87/205 (42%), Gaps = 16/205 (7%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKR-RGFICDQVTLTVMVVMYSKAGNL 221
+E A+ YT +I G + +I+ A T M+ +G D+V TVM+ + G
Sbjct: 684 DEHIPADCVVYTVLIDGLVRAKKIRKAWRTFWTMRTWKGLEPDEVLFTVMIKACAVRGEA 743
Query: 222 KMAEETFEEIKLLG-EPLDKRSYGSMVMAYV-RAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ A ++++ G P D +Y ++ A R + +M A+++ + VY
Sbjct: 744 ERAINLLDDMRASGLHPTDV-TYAELMHACCDRKDFASKCFHFYHQMLAEDMPITLPVYA 802
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA------------GQSQ 327
LLR + GN + A+ V + ++ + M L+I + A +
Sbjct: 803 FLLRACAAQGNVKRAKDVVRQMVRENVSFSSYMYTLVIRVFASAMRLPRVSDAERIANLR 862
Query: 328 KAYTAFQNMRKAGLEPSDKCVALIL 352
A+ Q+MR G+E K + +L
Sbjct: 863 YAWHLVQDMRAKGVEIETKTLNALL 887
>gi|237835109|ref|XP_002366852.1| PPR repeat-containing protein [Toxoplasma gondii ME49]
gi|211964516|gb|EEA99711.1| PPR repeat-containing protein [Toxoplasma gondii ME49]
Length = 1113
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 96/205 (46%), Gaps = 4/205 (1%)
Query: 155 QVAELAL--LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMV 212
Q+A L+ L ES + +++ +I A + L M R GF D+ + ++
Sbjct: 568 QLAPLSFQSLLESGRGSTKNFNSLIKAKVFFSDTAAALDVLEKMARHGFPPDEESFVHLI 627
Query: 213 VMYSKAGNLKMAEETFEEIK-LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
++ G+ A F +++ L P R Y +++ A+V A L LLR+M+ + +
Sbjct: 628 GGAARRGDSACARMLFLKMRATLSSPPSARVYAALIQAHVAAQDLPSAFALLRKMEDEHI 687
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQ-FAGITPDARMCALLINAYQMAGQSQKAY 330
VY L+ G A R F ++ + G+ PD + ++I A + G++++A
Sbjct: 688 PADCVVYTVLIDGLVRAKKIRKAWRTFWTMRTWKGLEPDEVLFTVMIKACAVRGEAERAI 747
Query: 331 TAFQNMRKAGLEPSDKCVALILSAC 355
+MR +GL P+D A ++ AC
Sbjct: 748 NLLDDMRASGLHPTDVTYAELMHAC 772
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 87/205 (42%), Gaps = 16/205 (7%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKR-RGFICDQVTLTVMVVMYSKAGNL 221
+E A+ YT +I G + +I+ A T M+ +G D+V TVM+ + G
Sbjct: 684 DEHIPADCVVYTVLIDGLVRAKKIRKAWRTFWTMRTWKGLEPDEVLFTVMIKACAVRGEA 743
Query: 222 KMAEETFEEIKLLG-EPLDKRSYGSMVMAYV-RAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ A ++++ G P D +Y ++ A R + +M A+++ + VY
Sbjct: 744 ERAINLLDDMRASGLHPTDV-TYAELMHACCDRKDFASKCFHFYHQMLAEDMPITLPVYA 802
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA------------GQSQ 327
LLR + GN + A+ V + ++ + M L+I + A +
Sbjct: 803 FLLRACAAQGNVKRAKDVVRQMVRENVSFSSYMYTLVIRVFASAMRLPRVSDAERIANLR 862
Query: 328 KAYTAFQNMRKAGLEPSDKCVALIL 352
A+ Q+MR G+E K + +L
Sbjct: 863 YAWHLVQDMRAKGVEIETKTLNALL 887
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 96/231 (41%), Gaps = 1/231 (0%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRR-GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLL 234
I+HG+ K+ ++++A N + M + GF DQ T +V KAG++K A E + +
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324
Query: 235 GEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGA 294
G D +Y S++ + G + L +M ++ + Y L+ E A
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384
Query: 295 QRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSA 354
+ + GI PD LI + + A F+ MR G EP + +++ +
Sbjct: 385 TELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDS 444
Query: 355 CEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ +L+ AL L +E G TL F + + E E + E
Sbjct: 445 LCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDE 495
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 88/207 (42%), Gaps = 2/207 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G+ K +I+ AE M+ G + VT ++ K+ ++ A + +++
Sbjct: 473 YNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMI 532
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ G+ DK +Y S++ + R G + + +++ M + Y L+ G G E
Sbjct: 533 MEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVE 592
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A ++ +IQ GI +I ++ +A F+ M + D I+
Sbjct: 593 VASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIV 652
Query: 353 --SACEKENQLNRALEFLIDLERDGFM 377
C + A++FL++L GF+
Sbjct: 653 FRGLCNGGGPIREAVDFLVELLEKGFV 679
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 86/211 (40%), Gaps = 2/211 (0%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M+ +G D+ T +++ G L A ++++L G +Y +++ + +A
Sbjct: 426 MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANK 485
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
+ E + EM+ V S Y L+ G + E A ++ + + G PD
Sbjct: 486 IREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNS 545
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
L+ + G +KA Q M G EP ++S K ++ A + L ++ G
Sbjct: 546 LLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKG 605
Query: 376 FMVGKEA-SCTLAAWFKRLGVVEEVEHVLRE 405
+ A + + F++ E + ++ RE
Sbjct: 606 IALTPHAYNPVIQGLFRKRKTTEAI-NLFRE 635
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/201 (18%), Positives = 87/201 (43%), Gaps = 1/201 (0%)
Query: 211 MVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE 270
M+ + NLK+ E ++ + G D ++ ++ A RA L ++L +M +
Sbjct: 160 MLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYG 219
Query: 271 VYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAY 330
+ + + +++GY G+ +GA R+ E + G + ++++ + G+ + A
Sbjct: 220 LVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDAL 279
Query: 331 TAFQNM-RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAW 389
Q M + G P +++ K + A+E + + ++G+ ++ +
Sbjct: 280 NFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISG 339
Query: 390 FKRLGVVEEVEHVLREYGLRE 410
+LG V+E L + R+
Sbjct: 340 LCKLGEVKEAVEFLDQMITRD 360
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 113/242 (46%), Gaps = 3/242 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+GY + +++ A +T MK R D +T ++ KA + A++ E++
Sbjct: 193 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 252
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G ++ +++ AY R G L++ ++L EM + Y +++ + NG
Sbjct: 253 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 312
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + + + P+A++ +I+AY G + +A+ + M+ G+ PS L++
Sbjct: 313 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 372
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE---EVEHVLREYGLR 409
++Q++ A E + L + + TL + G ++ +++ + +YG++
Sbjct: 373 KGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIK 432
Query: 410 ET 411
T
Sbjct: 433 ST 434
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 107/272 (39%), Gaps = 35/272 (12%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y +I G + + +A M R + + +T M+ + K G+L+
Sbjct: 14 NAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLR 73
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+++ G + +Y ++ RAG + LL EM +Q++ Y L G S N
Sbjct: 74 DQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRN 133
Query: 289 GNSEG-----------------------------------AQRVFEAIQFAGITPDARMC 313
G+S+ A+ V +++ AG+ P +
Sbjct: 134 GDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIY 193
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
LIN Y G+ + A++ F M+ ++P +++ K ++ A + L++++
Sbjct: 194 NTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQD 253
Query: 374 DGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+G E TL + R G +E+ VL E
Sbjct: 254 NGVNPTVETFNTLIDAYGRTGQLEKCFIVLSE 285
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 75/174 (43%)
Query: 198 RRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLD 257
+ G T ++++ K G + +AEE + + G + Y +++ Y + G L+
Sbjct: 148 KNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELE 207
Query: 258 RGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
+M ++ + Y AL+ G AQ + +Q G+ P LI
Sbjct: 208 GAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLI 267
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDL 371
+AY GQ +K + M++ GL+P+ I++A K ++ A+ L D+
Sbjct: 268 DAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDM 321
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 44/242 (18%), Positives = 92/242 (38%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ N Y ++ G + ++ L M + + D T +++ S+ G+ K
Sbjct: 79 HGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKA 138
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
F + G + + ++ + G + E +L+ + + +Y L+
Sbjct: 139 MLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLIN 198
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
GY G EGA F ++ I PD LIN A + A M+ G+ P
Sbjct: 199 GYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNP 258
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+ + ++ A + QL + L +++ +G + ++ F + G + E +L
Sbjct: 259 TVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAIL 318
Query: 404 RE 405
+
Sbjct: 319 DD 320
Score = 38.1 bits (87), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 51/121 (42%)
Query: 170 IRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFE 229
I Y +I G + QI AE + ++ I D V+ ++ GN+ A + +
Sbjct: 365 IVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQ 424
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
+ G R+Y ++ AG L+ E L ++M V + ++ ++ YS G
Sbjct: 425 RMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYG 484
Query: 290 N 290
N
Sbjct: 485 N 485
>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Glycine max]
Length = 1012
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 108/241 (44%), Gaps = 7/241 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
+ N YT II K ++ A N M RG D V T M+ KAG K AE
Sbjct: 302 LDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAE 361
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
E F+ I L + +Y +++ + + G ++ E +L++M+ + V + +++ GY
Sbjct: 362 EMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGY 421
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
+ G A V + I P+ + A+L++ Y GQ + A ++ M+ GLE ++
Sbjct: 422 AKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENN 481
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGK-EASCTLAAWFKR------LGVVEE 398
++L+ ++ + A + D+ G + S + +FK L VV+E
Sbjct: 482 IIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQE 541
Query: 399 V 399
+
Sbjct: 542 M 542
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 104/252 (41%), Gaps = 3/252 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I G K I+ + L M G++ + ++ YS++ +
Sbjct: 619 NMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIH 678
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+++ +G L++ Y +++ R GM + V+L EM + + Y AL+RGY
Sbjct: 679 KKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTG 738
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
+ E A + + +GI+P+ L+ G + A MR+ GL P+
Sbjct: 739 SHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTY 798
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGL 408
+++S + +++ ++ GF+ L + + G + + +L E
Sbjct: 799 NILVSGHGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLIQDYAKAGKMRQARELLNEMLT 858
Query: 409 RETYSKIPGSRS 420
R +IP S +
Sbjct: 859 R---GRIPNSST 867
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 93/209 (44%), Gaps = 1/209 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y ++ GY + Q + A MK G + + +++ ++G +K A+
Sbjct: 445 NVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLI 504
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++I G LD +Y S++ Y + G +++EM +++ Y AL +G
Sbjct: 505 KDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRL 564
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G E + VF + G+TPD ++N Y + G+++ A M+ G+ P+
Sbjct: 565 GKYE-PKSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTY 623
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFM 377
+++ K + + + L ++ G++
Sbjct: 624 NILIGGLCKTGAIEKVISVLHEMLAVGYV 652
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/205 (18%), Positives = 83/205 (40%)
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G +Q+ ++ + + G K A E+ + G D +Y +++ Y +++
Sbjct: 685 GLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKA 744
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+M + Y ALL G S NG A ++ ++ G+ P+A +L++
Sbjct: 745 FNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSG 804
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
+ G + + + M G P+ +++ K ++ +A E L ++ G +
Sbjct: 805 HGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRGRIPN 864
Query: 380 KEASCTLAAWFKRLGVVEEVEHVLR 404
L + +L E++ +L+
Sbjct: 865 SSTYDVLICGWCKLSCQPEMDRLLK 889
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 46/232 (19%), Positives = 96/232 (41%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKL 233
+ I++G + ++ A L M G + V+ T ++ K+G + A ++ +
Sbjct: 275 SSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVV 334
Query: 234 LGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEG 293
G +D +M+ +AG E + + + + Y ALL G+ G+ E
Sbjct: 335 RGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEF 394
Query: 294 AQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILS 353
A+ V + ++ + P+ + +IN Y G KA + M + + P+ A++L
Sbjct: 395 AETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLD 454
Query: 354 ACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ Q A F +++ G L KR G ++E + ++++
Sbjct: 455 GYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKD 506
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 72/165 (43%), Gaps = 5/165 (3%)
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G + + ++ ++V K G+L +A L D +Y ++V + + G+ D+G
Sbjct: 40 GVVPNVFSVNLLVHSLCKVGDLGLALG-----YLRNSVFDHVTYNTVVWGFCKRGLADQG 94
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
LL EM + V S L++GY G + A+ + + G+ DA L++
Sbjct: 95 FGLLSEMVKKGVCFDSVTCNILVKGYCQIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDG 154
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
Y G +A ++ K G++P +++A K L +A
Sbjct: 155 YCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFCKRGDLAKA 199
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/184 (19%), Positives = 75/184 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L++ N Y +I + + A L M +G D VT ++ Y +
Sbjct: 681 LVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSH 740
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ A T+ ++ + G + +Y +++ G++ + L+ EM + + + Y
Sbjct: 741 VEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNI 800
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G+ GN + +++ + G P +LI Y AG+ ++A M G
Sbjct: 801 LVSGHGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRG 860
Query: 341 LEPS 344
P+
Sbjct: 861 RIPN 864
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 84/215 (39%), Gaps = 27/215 (12%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
++ GY + +Q AE + + G D + L +V Y + G + A + E+ G
Sbjct: 116 LVKGYCQIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNG 175
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREM------------------------DAQEV 271
D +Y ++V A+ + G L + E ++ E+ D Q
Sbjct: 176 VKPDIVTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPT 235
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
V + L+ Y + + ++E + +G+ PD C+ ++ G+ +A
Sbjct: 236 VV---TWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAM 292
Query: 332 AFQNMRKAGLEPSDKCVALILSACEKENQLNRALE 366
+ M GL+P+ I+SA K ++ A
Sbjct: 293 LLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFN 327
>gi|357487731|ref|XP_003614153.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515488|gb|AES97111.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 691
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 100/210 (47%), Gaps = 8/210 (3%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN-LKMAEET 227
N+R Y I G + ++A +M+ G + D VT ++M++ K G+ K A +
Sbjct: 247 NVRVYNAAISGLLYDGRYKDAWKVYESMETDGVLPDHVTCSIMIIGMRKLGHSAKDAWQF 306
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
FE++ G K ++G+++ ++ G+L ++ EM+ + + + VY L+ Y
Sbjct: 307 FEKMNQKGVRWGKEAFGALIKSFCVEGLLSEALIIQSEMEKKGISSNAIVYNTLMDAYCK 366
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
+ E A+ +F ++ GI P A +L+ AY Q + + M+ GL+P+
Sbjct: 367 SNRVEEAEGLFVEMKAKGIKPTAVTFNILMYAYSRRMQPKIVESLLAEMKDFGLKPNANS 426
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFM 377
++SA ++ +++ D+ D F+
Sbjct: 427 YTCLISAYGRQKKMS-------DMAADAFL 449
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 98/234 (41%), Gaps = 1/234 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ Y K +++ AE + MK +G VT +++ YS+ K+ E E+K
Sbjct: 357 YNTLMDAYCKSNRVEEAEGLFVEMKAKGIKPTAVTFNILMYAYSRRMQPKIVESLLAEMK 416
Query: 233 LLGEPLDKRSYGSMVMAYVR-AGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
G + SY ++ AY R M D +M + S Y A++ YS++G
Sbjct: 417 DFGLKPNANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTAMIHAYSVSGWH 476
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALI 351
E A VFE + GI P L++A++ G ++ ++ M ++ + ++
Sbjct: 477 EKAYAVFENMIREGIKPSIETYTTLLDAFRRVGDTETLMKIWKLMMSEKVKGTQVTFNIL 536
Query: 352 LSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ K+ A + + + + G L + R G+ + +L+E
Sbjct: 537 VDGFAKQGLFMEARDVISEFGKIGLQPTVMTYNMLINAYARGGLDSNIPQLLKE 590
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 79/167 (47%), Gaps = 3/167 (1%)
Query: 241 RSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEA 300
+ Y ++ RA M D+ VL R + + + + VY A + G +G + A +V+E+
Sbjct: 214 KVYTTLFPLLGRARMGDKLMVLFRNLPSSKEFRNVRVYNAAISGLLYDGRYKDAWKVYES 273
Query: 301 IQFAGITPDARMCALLINAYQMAGQSQK-AYTAFQNMRKAGLEPSDKCV-ALILSACEKE 358
++ G+ PD C+++I + G S K A+ F+ M + G+ + ALI S C E
Sbjct: 274 METDGVLPDHVTCSIMIIGMRKLGHSAKDAWQFFEKMNQKGVRWGKEAFGALIKSFC-VE 332
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
L+ AL ++E+ G TL + + VEE E + E
Sbjct: 333 GLLSEALIIQSEMEKKGISSNAIVYNTLMDAYCKSNRVEEAEGLFVE 379
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 110/267 (41%), Gaps = 19/267 (7%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRD 172
+ P + L+ A+ R M+P+ + ++L ++K + + N
Sbjct: 385 IKPTAVTFNILMYAYSRRMQPKIVE--SLLAEMK----------------DFGLKPNANS 426
Query: 173 YTKIIHGYGKKMQIQN-AENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEI 231
YT +I YG++ ++ + A + L MK+ G + T M+ YS +G + A FE +
Sbjct: 427 YTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTAMIHAYSVSGWHEKAYAVFENM 486
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
G +Y +++ A+ R G + + + M +++V + L+ G++ G
Sbjct: 487 IREGIKPSIETYTTLLDAFRRVGDTETLMKIWKLMMSEKVKGTQVTFNILVDGFAKQGLF 546
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALI 351
A+ V G+ P +LINAY G + M L P + +
Sbjct: 547 MEARDVISEFGKIGLQPTVMTYNMLINAYARGGLDSNIPQLLKEMEALRLRPDSITYSTV 606
Query: 352 LSACEKENQLNRALEFLIDLERDGFMV 378
+ A + RA + ++ + G+++
Sbjct: 607 IYAFVRVRDFKRAFFYHKEMVKSGYVM 633
>gi|297741482|emb|CBI32614.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 102/234 (43%), Gaps = 30/234 (12%)
Query: 119 NLSDLLAAWVRF------------MKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESF 166
L L+AA+V F M+ R D +L+ + E+P Y
Sbjct: 312 TLHSLVAAYVGFGDLETAEKLVQAMREGRQDLCKILRDVN-SENPAY------------- 357
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFIC---DQVTLTVMVVMYSKAGNLKM 223
+ R YT ++ GY K+ ++ + L AM+ + D VT T +V KAG++
Sbjct: 358 APDSRIYTTLMKGYMKEGRVTDTVRMLEAMRHQDDSTSQPDHVTYTTVVSALVKAGSMDR 417
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV-YKALL 282
A + E+ +G P ++ +Y ++ Y +D+ + L+REM E V V Y L+
Sbjct: 418 ARQVLAEMTRIGVPANRVTYNILLKGYCEQLQIDKAKELVREMVDDEGIVPDVVSYNTLI 477
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
G + +S GA F ++ GI P L+ A+ ++GQ + A F M
Sbjct: 478 DGCILVDDSAGALAYFNEMRARGIAPTKISYTTLMKAFALSGQPKLANKVFDEM 531
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 85/202 (42%), Gaps = 19/202 (9%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M + G D +T VM+ + ++ + E I G L + S+V AYV G
Sbjct: 266 MTQLGAEPDVLTYNVMIKLCARVDRKDLLVFVLERILDKGIQLCMTTLHSLVAAYVGFGD 325
Query: 256 LDRGEVL--------------LREMDAQE-VYV-GSEVYKALLRGYSMNGNSEGAQRVFE 299
L+ E L LR+++++ Y S +Y L++GY G R+ E
Sbjct: 326 LETAEKLVQAMREGRQDLCKILRDVNSENPAYAPDSRIYTTLMKGYMKEGRVTDTVRMLE 385
Query: 300 AIQFAGIT---PDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACE 356
A++ + PD +++A AG +A M + G+ + ++L
Sbjct: 386 AMRHQDDSTSQPDHVTYTTVVSALVKAGSMDRARQVLAEMTRIGVPANRVTYNILLKGYC 445
Query: 357 KENQLNRALEFLIDLERDGFMV 378
++ Q+++A E + ++ D +V
Sbjct: 446 EQLQIDKAKELVREMVDDEGIV 467
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 83/203 (40%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +IHGY +++ A MK RG I + V + K G K A E F+ +
Sbjct: 338 YNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMT 397
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D SY +++ Y G L M + + V+ L+ Y+ G +
Sbjct: 398 AKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVD 457
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +F +Q G++PD + +I+A+ G+ A F M G++P+ I+
Sbjct: 458 DAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSII 517
Query: 353 SACEKENQLNRALEFLIDLERDG 375
L +A E + ++ G
Sbjct: 518 QGFCMHGGLVKAKELVSEMINKG 540
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 95/226 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +IHG+ K+ + A + M R+G D VT +++ KA + AE
Sbjct: 264 NVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVL 323
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ G D +Y M+ Y G L + R+M ++ + + + L +
Sbjct: 324 RQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKH 383
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G S+ A +F+++ G PD L++ Y G F +M+ G+ +
Sbjct: 384 GRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVF 443
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
+++ A K ++ A+ ++++ G T+ + F R+G
Sbjct: 444 NILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMG 489
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 93/209 (44%), Gaps = 1/209 (0%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
A+ R + +IH Y K+ + +A M+++G D VT + ++ +S+ G L A E
Sbjct: 438 ADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEK 497
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY-KALLRGYS 286
F ++ G + Y S++ + G L + + L+ EM + + V+ +++
Sbjct: 498 FNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLC 557
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
+G A +F+ + G PD LI+ Y + G+ KA+ M G+E
Sbjct: 558 KDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIV 617
Query: 347 CVALILSACEKENQLNRALEFLIDLERDG 375
+ +L K ++N L +++R G
Sbjct: 618 TYSTLLDGYFKNGRINDGLTLFREMQRKG 646
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 100/234 (42%), Gaps = 4/234 (1%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E +I Y+ ++ GY K +I + M+R+G + VT +M+ +AG A +
Sbjct: 613 ETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARK 672
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
F E+ G + YG ++ R D +L +++ V + ++
Sbjct: 673 KFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMY 732
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
E A+ +F I +G+ P+ ++I G + A F +M K+G+ P +
Sbjct: 733 KVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSR 792
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCT--LAAWFKRLGVVEE 398
+ I+ ++ ++ +A +L + DG + EAS T + + F R G E
Sbjct: 793 LLNRIIRMLLEKGEIAKAGNYLSKV--DGKRILLEASTTSLMLSLFSRKGKYHE 844
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 97/239 (40%), Gaps = 2/239 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFIC--DQVTLTVMVVMYSKAGNLKMAEE 226
N+ Y+ I+ G Q A + M + G C + V ++ + K G A
Sbjct: 227 NVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACS 286
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
F E+ G D +Y ++ A +A +D+ E++LR+M + Y ++ GY+
Sbjct: 287 LFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYA 346
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G + A ++F ++ G+ P+ +C + + G+S++A F +M G +P
Sbjct: 347 TLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIV 406
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+L E + ++ +G L + + G+V++ + E
Sbjct: 407 SYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTE 465
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 99/254 (38%), Gaps = 19/254 (7%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRD 172
VSP+ S +++A+ R R D + Q+ + + N
Sbjct: 471 VSPDVVTYSTVISAFSRM--GRLTDAMEKFNQM----------------VARGIQPNTAV 512
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFI-CDQVTLTVMVVMYSKAGNLKMAEETFEEI 231
Y II G+ + A+ + M +G D V ++ K G + A + F+ +
Sbjct: 513 YHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLV 572
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
+GE D ++ S++ Y G +D+ +L M+ V Y LL GY NG
Sbjct: 573 TDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRI 632
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALI 351
+F +Q G+ P+ +++ AG++ A F M ++G + +I
Sbjct: 633 NDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGII 692
Query: 352 LSACEKENQLNRAL 365
L + N + A+
Sbjct: 693 LGGLCRNNCADEAI 706
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 87/211 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ +T +I GY ++ A L AM+ G D VT + ++ Y K G + F
Sbjct: 580 DVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLF 639
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++ G + +YG M+ RAG EM V +Y +L G N
Sbjct: 640 REMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRN 699
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
++ A +F+ + + + +INA + ++A F + +GL P++
Sbjct: 700 NCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTY 759
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVG 379
+++ K+ + A +E+ G + G
Sbjct: 760 GVMIINLLKDGAVEDANNMFSSMEKSGIVPG 790
>gi|410110105|gb|AFV61132.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
aristata]
Length = 382
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 101/212 (47%), Gaps = 4/212 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 174 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDR 233
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ + +M++AY RAG++ + LL E+ + + + +L
Sbjct: 234 AAMLFQKLRSSGIEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDTAIHILA 292
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + F MR G P
Sbjct: 293 G---AGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFP 349
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDG 375
+A++L+A K + ++A + ++++ G
Sbjct: 350 DSDVIAIVLNAYGKLQEFDKANDVYMEMQEVG 381
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 102/237 (43%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 74 NTXSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 133
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 134 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 193
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G+E
Sbjct: 194 LEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQILF 253
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE +V R+
Sbjct: 254 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGA----GRIEEATYVFRQ 306
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 102/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + MK G + + + + ++ MY + A
Sbjct: 36 FTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTXSYSTLLTMYVENKKFLEAL 95
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 96 SVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 155
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + ++ Y + +KA Q M+ G+E
Sbjct: 156 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIE 212
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 213 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQILFQTMIVAYERAGLVAHAKRL 272
Query: 403 LRE 405
L E
Sbjct: 273 LHE 275
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 61/141 (43%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D V + ++ + K + A F +K G D +Y +M+ + +A + L+
Sbjct: 4 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 63
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
EM A V + Y LL Y N A VF ++ D C ++I+ Y
Sbjct: 64 GEMKAAGVMPNTXSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 123
Query: 324 GQSQKAYTAFQNMRKAGLEPS 344
G +++A F MRK G+EP+
Sbjct: 124 GMAKEADKLFWGMRKMGIEPN 144
>gi|410110085|gb|AFV61122.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
fucata]
Length = 382
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 101/212 (47%), Gaps = 4/212 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 174 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDR 233
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ + +M++AY RAG++ + LL E+ + + + +L
Sbjct: 234 AAMLFQKLRSSGIEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDTAIHILA 292
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + F MR G P
Sbjct: 293 G---AGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFP 349
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDG 375
+A++L+A K + ++A + ++++ G
Sbjct: 350 DSDVIAIVLNAYGKLQEFDKANDVYMEMQEVG 381
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 102/237 (43%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 74 NTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 133
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 134 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 193
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G+E
Sbjct: 194 LEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQILF 253
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE +V R+
Sbjct: 254 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGA----GRIEEATYVFRQ 306
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 102/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + MK G + + + + ++ MY + A
Sbjct: 36 FTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTTSYSTLLTMYVENKKFLEAL 95
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 96 SVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 155
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + ++ Y + +KA Q M+ G+E
Sbjct: 156 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIE 212
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 213 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQILFQTMIVAYERAGLVAHAKRL 272
Query: 403 LRE 405
L E
Sbjct: 273 LHE 275
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 61/141 (43%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D V + ++ + K + A F +K G D +Y +M+ + +A + L+
Sbjct: 4 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 63
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
EM A V + Y LL Y N A VF ++ D C ++I+ Y
Sbjct: 64 GEMKAAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 123
Query: 324 GQSQKAYTAFQNMRKAGLEPS 344
G +++A F MRK G+EP+
Sbjct: 124 GMAKEADKLFWGMRKMGIEPN 144
>gi|125535459|gb|EAY81947.1| hypothetical protein OsI_37125 [Oryza sativa Indica Group]
Length = 697
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 88/188 (46%), Gaps = 8/188 (4%)
Query: 158 ELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFIC-----DQVTLTVMV 212
E+ LL +++ N R YT ++ GY ++++ L AM+R G D VT T ++
Sbjct: 339 EVPLLPKAYPPNSRVYTTLMKGYMNAGRVEDVVAMLRAMRREGETSPASRPDHVTYTTVI 398
Query: 213 VMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY 272
AG+++ A EE+ G + +Y ++ Y + + + LL +D E
Sbjct: 399 STLVAAGDMERARAVLEEMGQAGVAASRVTYNVLIKGYCQQLQAGKAKELL-AVDMAEAG 457
Query: 273 VGSEV--YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAY 330
+ +V Y L+ G + +S GA +F ++ GI P A L+ A+ +GQ + A+
Sbjct: 458 IQPDVVTYNTLIDGCVLTDDSAGAVALFNEMRERGIAPSAVSYTTLMKAFAASGQPKLAH 517
Query: 331 TAFQNMRK 338
F M K
Sbjct: 518 KVFDEMEK 525
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 84/187 (44%), Gaps = 7/187 (3%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+ E + ++ Y +I G A M+ RG V+ T ++ ++ +G
Sbjct: 453 MAEAGIQPDVVTYNTLIDGCVLTDDSAGAVALFNEMRERGIAPSAVSYTTLMKAFAASGQ 512
Query: 221 LKMAEETFEEIKLLGEP---LDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
K+A + F+E++ +P +D+ ++ +V AY R G+L+ + ++ M A+ V
Sbjct: 513 PKLAHKVFDEME--KDPRVAVDRAAWNMLVEAYCRLGLLESAKKVVERMKARGVQPDVAT 570
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y +L +G ++ A ++E I+ + D + L + A +KA M
Sbjct: 571 YGSLAKGIAVARRPGEALLLWEEIKEKEV--DGEVVEALADVCVRAALFRKALEMVARME 628
Query: 338 KAGLEPS 344
+ G+EP+
Sbjct: 629 EMGVEPN 635
>gi|297733647|emb|CBI14894.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 1/213 (0%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M+++G + + ++ YSK+ ++ AE F E+K G +Y ++ AY R
Sbjct: 339 MEKKGISSNAIVYNTLMDAYSKSNRVEEAEGLFGEMKAKGVMPTSATYNILMDAYSRRMQ 398
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN-SEGAQRVFEAIQFAGITPDARMCA 314
+ E LL EM + + Y L+ Y S+ A F ++ GI P +
Sbjct: 399 PEIIENLLLEMQDMGLEPNVKSYTCLISAYGRQKKMSDMAADAFLRMKKVGIKPTSHSYT 458
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
LI+AY + G +KAYTAF+NM++ G++PS + +L A + ++ + D
Sbjct: 459 ALIHAYSVGGWHEKAYTAFENMKREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMLSD 518
Query: 375 GFMVGKEASCTLAAWFKRLGVVEEVEHVLREYG 407
+ L F + G E V+ E+G
Sbjct: 519 KIEGTRVTFNILLDGFAKQGHYMEARDVIFEFG 551
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 98/234 (41%), Gaps = 1/234 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ Y K +++ AE MK +G + T +++ YS+ ++ E E++
Sbjct: 351 YNTLMDAYSKSNRVEEAEGLFGEMKAKGVMPTSATYNILMDAYSRRMQPEIIENLLLEMQ 410
Query: 233 LLGEPLDKRSYGSMVMAYVR-AGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
+G + +SY ++ AY R M D M + S Y AL+ YS+ G
Sbjct: 411 DMGLEPNVKSYTCLISAYGRQKKMSDMAADAFLRMKKVGIKPTSHSYTALIHAYSVGGWH 470
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALI 351
E A FE ++ GI P L++A++ AG +Q ++ M +E + ++
Sbjct: 471 EKAYTAFENMKREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMLSDKIEGTRVTFNIL 530
Query: 352 LSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
L K+ A + + + + GF L + R G + +L+E
Sbjct: 531 LDGFAKQGHYMEARDVIFEFGKIGFQPTVMTYNMLMNAYARGGQHSRLPQLLKE 584
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 114/264 (43%), Gaps = 19/264 (7%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRD 172
V P + + L+ A+ R M+P +++E+ L L++ ++ L E N++
Sbjct: 379 VMPTSATYNILMDAYSRRMQP------------EIIEN-LLLEMQDMGL-----EPNVKS 420
Query: 173 YTKIIHGYGKKMQIQN-AENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEI 231
YT +I YG++ ++ + A + L MK+ G + T ++ YS G + A FE +
Sbjct: 421 YTCLISAYGRQKKMSDMAADAFLRMKKVGIKPTSHSYTALIHAYSVGGWHEKAYTAFENM 480
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
K G +Y +++ A+ RAG + + M + ++ + LL G++ G+
Sbjct: 481 KREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMLSDKIEGTRVTFNILLDGFAKQGHY 540
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALI 351
A+ V G P +L+NAY GQ + + M L+P + +
Sbjct: 541 MEARDVIFEFGKIGFQPTVMTYNMLMNAYARGGQHSRLPQLLKEMTSLNLKPDSITYSTM 600
Query: 352 LSACEKENQLNRALEFLIDLERDG 375
+ A + RA + + + G
Sbjct: 601 IYAYVRVRDFKRAFFYHKQMVKSG 624
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 8/210 (3%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN-LKMAEET 227
++R Y I G + +A M+ D VT ++M+ + K G+ K A E
Sbjct: 241 DVRIYNSAISGLSSCGRYDDAWKVYDEMETNNIRPDHVTCSIMITVMRKDGHSAKDAWEF 300
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
F+ + G G+++ ++ G+ + ++ EM+ + + + VY L+ YS
Sbjct: 301 FQRMNRKGVKWSLEVLGALIKSFCDEGLKNEALIIQSEMEKKGISSNAIVYNTLMDAYSK 360
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
+ E A+ +F ++ G+ P + +L++AY Q + M+ GLEP+ K
Sbjct: 361 SNRVEEAEGLFGEMKAKGVMPTSATYNILMDAYSRRMQPEIIENLLLEMQDMGLEPNVKS 420
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFM 377
++SA ++ +++ D+ D F+
Sbjct: 421 YTCLISAYGRQKKMS-------DMAADAFL 443
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 75/156 (48%), Gaps = 3/156 (1%)
Query: 252 RAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDAR 311
RAGM D VLLR + + +Y + + G S G + A +V++ ++ I PD
Sbjct: 219 RAGMGDDLMVLLRNLPKTRQFRDVRIYNSAISGLSSCGRYDDAWKVYDEMETNNIRPDHV 278
Query: 312 MCALLINAYQMAGQSQK-AYTAFQNMRKAGLEPSDKCV-ALILSACEKENQLNRALEFLI 369
C+++I + G S K A+ FQ M + G++ S + + ALI S C+ E N AL
Sbjct: 279 TCSIMITVMRKDGHSAKDAWEFFQRMNRKGVKWSLEVLGALIKSFCD-EGLKNEALIIQS 337
Query: 370 DLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++E+ G TL + + VEE E + E
Sbjct: 338 EMEKKGISSNAIVYNTLMDAYSKSNRVEEAEGLFGE 373
>gi|326490553|dbj|BAJ84940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 856
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 6/204 (2%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
LY ++ E+ L ++F Y+ +++ GK Q+ A M G + VT ++
Sbjct: 455 LYGRMQEVGLSPDTFT-----YSAMVNCLGKGGQLAAAYKLFCEMIDNGCTPNLVTYNII 509
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ + +KA N + + ++++ G DK +Y ++ G LD E + EM ++
Sbjct: 510 IALQAKARNYDNVVKLYRDMQIAGFRPDKITYSIVMEVLGHCGHLDEAEAVFLEMR-RDW 568
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
VY L+ + GN + A + A+ G+ P+ C L++A+ + Q AY
Sbjct: 569 APDEPVYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKLNRFQDAYG 628
Query: 332 AFQNMRKAGLEPSDKCVALILSAC 355
QNM GL PS + L+LS C
Sbjct: 629 VLQNMLAQGLVPSLQTYTLLLSCC 652
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 101/255 (39%), Gaps = 38/255 (14%)
Query: 161 LLEESFEANIR----DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS 216
LL+E N + Y +IIH YG+ ++ A M+ G+ D+VT ++ +++
Sbjct: 385 LLDEMSSVNCKPTVVTYNRIIHAYGRANYLREAVKVFEEMEGAGYQPDRVTYCTLIDIHA 444
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
K+G L++A + + ++ +G D +Y +MV + G L L EM
Sbjct: 445 KSGYLEVAMDLYGRMQEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIDNGCTPNLV 504
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGI------------------------------ 306
Y ++ + N + +++ +Q AG
Sbjct: 505 TYNIIIALQAKARNYDNVVKLYRDMQIAGFRPDKITYSIVMEVLGHCGHLDEAEAVFLEM 564
Query: 307 ----TPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLN 362
PD + LL++ + AG KA + M + GL+P+ +LSA K N+
Sbjct: 565 RRDWAPDEPVYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKLNRFQ 624
Query: 363 RALEFLIDLERDGFM 377
A L ++ G +
Sbjct: 625 DAYGVLQNMLAQGLV 639
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 85/211 (40%), Gaps = 1/211 (0%)
Query: 196 MKRR-GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG 254
+KR+ GF D T T M+ + +A + +E+ + +Y ++ AY RA
Sbjct: 353 LKRQPGFKHDGHTYTTMIGILGQAKQFGTMRKLLDEMSSVNCKPTVVTYNRIIHAYGRAN 412
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
L + EM+ Y L+ ++ +G E A ++ +Q G++PD +
Sbjct: 413 YLREAVKVFEEMEGAGYQPDRVTYCTLIDIHAKSGYLEVAMDLYGRMQEVGLSPDTFTYS 472
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
++N GQ AY F M G P+ +I++ K + ++ D++
Sbjct: 473 AMVNCLGKGGQLAAAYKLFCEMIDNGCTPNLVTYNIIIALQAKARNYDNVVKLYRDMQIA 532
Query: 375 GFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
GF K + G ++E E V E
Sbjct: 533 GFRPDKITYSIVMEVLGHCGHLDEAEAVFLE 563
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/228 (19%), Positives = 90/228 (39%)
Query: 147 LMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQV 206
L +H + L + F+ + YT +I G+ Q L M V
Sbjct: 340 LHDHNIALGFFHWLKRQPGFKHDGHTYTTMIGILGQAKQFGTMRKLLDEMSSVNCKPTVV 399
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
T ++ Y +A L+ A + FEE++ G D+ +Y +++ + ++G L+ L M
Sbjct: 400 TYNRIIHAYGRANYLREAVKVFEEMEGAGYQPDRVTYCTLIDIHAKSGYLEVAMDLYGRM 459
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
+ + Y A++ G A ++F + G TP+ ++I A
Sbjct: 460 QEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIDNGCTPNLVTYNIIIALQAKARNY 519
Query: 327 QKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
+++M+ AG P ++++ L+ A +++ RD
Sbjct: 520 DNVVKLYRDMQIAGFRPDKITYSIVMEVLGHCGHLDEAEAVFLEMRRD 567
>gi|302143554|emb|CBI22115.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 83/174 (47%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D T ++ ++ G A E +E ++ G LD +Y M+ + ++G LD L
Sbjct: 196 DTATYNSLITLFLNKGLPYKAFEVYESMEAAGCLLDGSTYELMIPSLAKSGRLDAAFKLF 255
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
+EM + + V+ +L+ G + + +V+ +Q G+ P A M LI ++ A
Sbjct: 256 QEMKEKNLRPSFLVFASLVDSMGKAGRLDTSMKVYMEMQGFGLRPSATMYVSLIESFVKA 315
Query: 324 GQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
G+ + A + M+KAG P+ +++ + K +L A+ D+E+ GF+
Sbjct: 316 GKLETALRIWDEMKKAGFRPNYGLYTMVVESHAKSGKLETAMSVFSDMEKAGFL 369
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 92/219 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I K ++ A MK + + +V KAG L + + + E++
Sbjct: 235 YELMIPSLAKSGRLDAAFKLFQEMKEKNLRPSFLVFASLVDSMGKAGRLDTSMKVYMEMQ 294
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G Y S++ ++V+AG L+ + EM +Y ++ ++ +G E
Sbjct: 295 GFGLRPSATMYVSLIESFVKAGKLETALRIWDEMKKAGFRPNYGLYTMVVESHAKSGKLE 354
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A VF ++ AG P + L+ + +GQ A + +M AGL P +L
Sbjct: 355 TAMSVFSDMEKAGFLPTPSTYSCLLEMHSASGQVDSAMKLYNSMTNAGLRPGLSTYTALL 414
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFK 391
+ + ++ A + L++++ GF V AS L + K
Sbjct: 415 TLLANKKLVDVAAKVLLEMKAMGFSVDVSASDVLMVYIK 453
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 65/143 (45%), Gaps = 3/143 (2%)
Query: 273 VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTA 332
+ + Y +L+ + G A V+E+++ AG D L+I + +G+ A+
Sbjct: 195 IDTATYNSLITLFLNKGLPYKAFEVYESMEAAGCLLDGSTYELMIPSLAKSGRLDAAFKL 254
Query: 333 FQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKR 392
FQ M++ L PS A ++ + K +L+ +++ ++++ G +L F +
Sbjct: 255 FQEMKEKNLRPSFLVFASLVDSMGKAGRLDTSMKVYMEMQGFGLRPSATMYVSLIESFVK 314
Query: 393 LGVVEEVEHV---LREYGLRETY 412
G +E + +++ G R Y
Sbjct: 315 AGKLETALRIWDEMKKAGFRPNY 337
>gi|302791627|ref|XP_002977580.1| hypothetical protein SELMODRAFT_107283 [Selaginella moellendorffii]
gi|300154950|gb|EFJ21584.1| hypothetical protein SELMODRAFT_107283 [Selaginella moellendorffii]
Length = 555
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 106/229 (46%), Gaps = 14/229 (6%)
Query: 134 RRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTL 193
R D+ A+L+ + ME AE+ + N+ + +I G+ ++ A+
Sbjct: 142 RVGDYQAILRLFRDMEQ------AEI-------KPNVVLFNTLIGTLGRAGKVTLAKGMF 188
Query: 194 LAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRA 253
M G ++TL++++ MY+K G L A + ++ IK LD Y +++ + V +
Sbjct: 189 DEMATYGLEPSEITLSILIDMYTKVGALDKALDVYDTIKQKKWKLDVLVYNTLLKSCVES 248
Query: 254 GMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
G + R E L+ EM+ ++ + Y L+ Y+ G + +F+ ++ + P A
Sbjct: 249 GNIQRAESLIAEMEMEKQWPDHMTYGILMNVYATKGMVAEVRAMFDKLKNLAVFPKAAFY 308
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLN 362
+LI A + AG + F M G +++ +++S C +Q++
Sbjct: 309 TMLIKASKQAGDFDRIPGIFDEMVANGCSVNERMSGMLVS-CASSSQIS 356
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 75/177 (42%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
++ G D VT + M+ +Y KAG A + ++ ++ D S+G + Y R G
Sbjct: 86 LRETGVSFDGVTYSAMIDLYGKAGRTAEAMDLYQTMRKNNWKPDLVSFGVIANVYSRVGD 145
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
L R+M+ E+ ++ L+ G A+ +F+ + G+ P ++
Sbjct: 146 YQAILRLFRDMEQAEIKPNVVLFNTLIGTLGRAGKVTLAKGMFDEMATYGLEPSEITLSI 205
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLE 372
LI+ Y G KA + +++ + +L +C + + RA + ++E
Sbjct: 206 LIDMYTKVGALDKALDVYDTIKQKKWKLDVLVYNTLLKSCVESGNIQRAESLIAEME 262
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/205 (19%), Positives = 85/205 (41%), Gaps = 8/205 (3%)
Query: 206 VTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLRE 265
V ++ +AG + +A+ F+E+ G + + ++ Y + G LD+ +
Sbjct: 166 VLFNTLIGTLGRAGKVTLAKGMFDEMATYGLEPSEITLSILIDMYTKVGALDKALDVYDT 225
Query: 266 MDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQ 325
+ ++ + VY LL+ +GN + A+ + ++ PD +L+N Y G
Sbjct: 226 IKQKKWKLDVLVYNTLLKSCVESGNIQRAESLIAEMEMEKQWPDHMTYGILMNVYATKGM 285
Query: 326 SQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF-----MVGK 380
+ F ++ + P +++ A ++ +R ++ +G M G
Sbjct: 286 VAEVRAMFDKLKNLAVFPKAAFYTMLIKASKQAGDFDRIPGIFDEMVANGCSVNERMSGM 345
Query: 381 EASCTLAAWFK---RLGVVEEVEHV 402
SC ++ RLGV+E V+ +
Sbjct: 346 LVSCASSSQISDETRLGVLECVKKI 370
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 125/291 (42%), Gaps = 18/291 (6%)
Query: 115 PETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYT 174
P+T + L+ A F K +R D +V K + M++ ++ N+ Y+
Sbjct: 122 PDTYTFNVLMNA---FKKAKRVD--SVWKLFEEMQN-------------QNCSPNVITYS 163
Query: 175 KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLL 234
+I K ++ A L MK RG + T T M+ K+G++ A FEE+
Sbjct: 164 ILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSE 223
Query: 235 GEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGA 294
G + Y S++ R+G D L REM ++ + + +L+ G + G + A
Sbjct: 224 GLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEA 283
Query: 295 QRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSA 354
+R+F+ + G D + +LI+ + + +A+ F + + GL P ++
Sbjct: 284 RRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDG 343
Query: 355 CEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
K +++ A L D++R G TL ++ G VEE +L E
Sbjct: 344 LCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLE 394
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 84/204 (41%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +IHG G+ + A M +G D VT T +V AG A F+E +
Sbjct: 232 YNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEAR 291
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+G LD Y ++ ++ LD + E++ + + AL+ G +G
Sbjct: 292 DVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIH 351
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + ++ AG TPD + LI+ + +G+ ++A M+ G EP ++
Sbjct: 352 DAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLI 411
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
K ++ AL ++ GF
Sbjct: 412 DESCKGGRIEDALRLFEEISAKGF 435
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/208 (19%), Positives = 83/208 (39%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
NI YT +I G GK + A M G + +V ++ ++G A + F
Sbjct: 193 NIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLF 252
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E+ G D ++ S+V AG + +E + +Y L+ +
Sbjct: 253 REMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKS 312
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
+ A +F ++ G+ PD L++ +G+ A+ +M++AG P
Sbjct: 313 KRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVY 372
Query: 349 ALILSACEKENQLNRALEFLIDLERDGF 376
++ K ++ A + L++++ G+
Sbjct: 373 NTLIDGLRKSGRVEEAGQLLLEMQSLGY 400
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 66/138 (47%)
Query: 238 LDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRV 297
L R + + Y AG+L++ L+ M+ + + Y +L+ + G ++ A V
Sbjct: 52 LQPRIFIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAV 111
Query: 298 FEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEK 357
+ + +G+ PD +L+NA++ A + + F+ M+ P+ ++++ A K
Sbjct: 112 YRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCK 171
Query: 358 ENQLNRALEFLIDLERDG 375
+ +AL+ +D++ G
Sbjct: 172 CGGVEKALKVFLDMKSRG 189
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/191 (19%), Positives = 81/191 (42%)
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
Y+ AG L+ + E + ++ L +Y S++ A+V+AG + + R M +
Sbjct: 64 YASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPD 123
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+ + L+ + + ++FE +Q +P+ ++LI+A G +KA F
Sbjct: 124 TYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFL 183
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
+M+ G P+ ++ K +++A ++ +G + + +L R G
Sbjct: 184 DMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSG 243
Query: 395 VVEEVEHVLRE 405
+ + RE
Sbjct: 244 RADAAAKLFRE 254
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 37/181 (20%), Positives = 72/181 (39%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + + + +T +++G G + A + G D V++ K+
Sbjct: 255 MLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKR 314
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A E F E++ G D ++ +++ ++G + +LL +M VY
Sbjct: 315 LDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNT 374
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G +G E A ++ +Q G PD LI+ G+ + A F+ + G
Sbjct: 375 LIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKG 434
Query: 341 L 341
Sbjct: 435 F 435
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 67/170 (39%), Gaps = 1/170 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y +I K ++ A ++ G + D T ++ K+G + A
Sbjct: 298 DVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILL 357
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++K G D Y +++ ++G ++ LL EM + Y L+
Sbjct: 358 GDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKG 417
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
G E A R+FE I G +L N MAG+ +AY F M++
Sbjct: 418 GRIEDALRLFEEISAKGFANTVTYNTIL-NGLCMAGRVDEAYKLFNGMKQ 466
>gi|410110063|gb|AFV61111.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
barbata]
Length = 364
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 101/212 (47%), Gaps = 4/212 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 156 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDR 215
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ + +M++AY RAG++ + LL E+ + + + +L
Sbjct: 216 AAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDTAIHILA 274
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + F MR G P
Sbjct: 275 G---AGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVXEVFDKMRGLGYFP 331
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDG 375
+A++L+A K + ++A + ++++ G
Sbjct: 332 DSNVIAVVLNAYGKLXEFDKANDVYMEMQEVG 363
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 102/237 (43%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 56 NTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 115
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 116 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 175
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G+E
Sbjct: 176 LEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILF 235
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE +V R+
Sbjct: 236 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGA----GRIEEATYVFRQ 288
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 102/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + MK G + + + + ++ MY + A
Sbjct: 18 FTPDLVAYNAMINVFGKAKLFREARSLISEMKXAGVMPNTTSYSTLLTMYVENKKFLEAL 77
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 78 SVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 137
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + ++ Y + +KA Q M+ G+E
Sbjct: 138 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIE 194
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 195 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRL 254
Query: 403 LRE 405
L E
Sbjct: 255 LHE 257
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 6/130 (4%)
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
YSKA ++ F +K G D +Y +M+ + +A + L+ EM V
Sbjct: 3 YSKAISI------FSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKXAGVMPN 56
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+ Y LL Y N A VF ++ D C ++I+ Y G +++A F
Sbjct: 57 TTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFW 116
Query: 335 NMRKAGLEPS 344
MRK G+EP+
Sbjct: 117 GMRKMGIEPN 126
>gi|449467965|ref|XP_004151692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Cucumis sativus]
gi|449468117|ref|XP_004151768.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Cucumis sativus]
gi|449532400|ref|XP_004173169.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Cucumis sativus]
Length = 456
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 101/237 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y +I GY + + A + L M+ G D +T ++ ++ +L+ + + F
Sbjct: 41 DVVTYNTLIDGYCRFSGMDAAYSVLYRMREAGISPDVITYNSLIAGATRNFSLEQSLDLF 100
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
EE+ G D SY +++ + G D + +++ +++ + ++ G +
Sbjct: 101 EEMLQSGITPDIWSYNTLMHCFFILGKPDEAYRVFKDIILKDLSPHPVTFNTMINGLCKH 160
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A +F +Q G P +LIN + + A +GLEP+
Sbjct: 161 GYTSNAIMLFRNLQRHGFIPQLVTYNILINGLCKVDRLRAAIRMLNEAMDSGLEPNAVTY 220
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ +C + Q R E ++ G+ A CT++ F +LG EE + + +
Sbjct: 221 TTLMKSCFRSRQYERGFEIFSKMKNKGYAFDGFAYCTVSGAFLKLGRFEEAKFCMEQ 277
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 77/170 (45%)
Query: 208 LTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMD 267
L + V + K+ ++ AE + +G D +Y +++ Y R +D +L M
Sbjct: 10 LNICVASFCKSQQMQKAEAVIIDGIRIGVLPDVVTYNTLIDGYCRFSGMDAAYSVLYRMR 69
Query: 268 AQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQ 327
+ Y +L+ G + N + E + +FE + +GITPD L++ + + G+
Sbjct: 70 EAGISPDVITYNSLIAGATRNFSLEQSLDLFEEMLQSGITPDIWSYNTLMHCFFILGKPD 129
Query: 328 KAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
+AY F+++ L P +++ K + A+ +L+R GF+
Sbjct: 130 EAYRVFKDIILKDLSPHPVTFNTMINGLCKHGYTSNAIMLFRNLQRHGFI 179
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 84/219 (38%), Gaps = 4/219 (1%)
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL 221
++ E N YT ++ + Q + MK +G+ D + + K G
Sbjct: 209 MDSGLEPNAVTYTTLMKSCFRSRQYERGFEIFSKMKNKGYAFDGFAYCTVSGAFLKLGRF 268
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
+ A+ E++ +D Y + + Y + G L+ L E++ + + + +
Sbjct: 269 EEAKFCMEQMIKNDVGIDITFYNTFINLYCKEGKLEAAYKLFDEIEPRGLECDVYTHSII 328
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
G GN EGA + + G + LI+ AGQ +A F++M
Sbjct: 329 TNGLCRVGNIEGAMQHLNCVYTTGFASNLVALNCLIDRLCKAGQIDRAIRLFESMET--- 385
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGK 380
S +L+ + C K + A + LI RDG V K
Sbjct: 386 RDSFTYTSLVHNLC-KARRFRCASKLLISCSRDGMKVLK 423
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/240 (18%), Positives = 87/240 (36%), Gaps = 36/240 (15%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA-------- 224
+ +I+G K NA ++R GFI VT +++ K L+ A
Sbjct: 150 FNTMINGLCKHGYTSNAIMLFRNLQRHGFIPQLVTYNILINGLCKVDRLRAAIRMLNEAM 209
Query: 225 ---------------------------EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLD 257
E F ++K G D +Y ++ A+++ G +
Sbjct: 210 DSGLEPNAVTYTTLMKSCFRSRQYERGFEIFSKMKNKGYAFDGFAYCTVSGAFLKLGRFE 269
Query: 258 RGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
+ + +M +V + Y + Y G E A ++F+ I+ G+ D +++
Sbjct: 270 EAKFCMEQMIKNDVGIDITFYNTFINLYCKEGKLEAAYKLFDEIEPRGLECDVYTHSIIT 329
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLE-RDGF 376
N G + A + G + + ++ K Q++RA+ +E RD F
Sbjct: 330 NGLCRVGNIEGAMQHLNCVYTTGFASNLVALNCLIDRLCKAGQIDRAIRLFESMETRDSF 389
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 113/246 (45%), Gaps = 2/246 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E N+ ++ +I + K+ ++ AE M +R D T + ++ +
Sbjct: 300 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 359
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV-YK 279
L A+ FE + + +Y +++ + +A ++ G L REM +Q VG+ V Y
Sbjct: 360 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM-SQRGLVGNTVTYN 418
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L++G G+ + AQ++F+ + G+ PD ++L++ G+ +KA F+ ++K+
Sbjct: 419 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 478
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEV 399
+EP +++ K ++ + L G T+ + F R G+ EE
Sbjct: 479 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 538
Query: 400 EHVLRE 405
+ + RE
Sbjct: 539 DALFRE 544
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 105/230 (45%), Gaps = 2/230 (0%)
Query: 158 ELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSK 217
EL + ++ F N+ Y +I G+ K +++ M +RG + + VT ++ +
Sbjct: 368 ELMISKDCF-PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 426
Query: 218 AGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
AG+ MA++ F+++ G P D +Y ++ + G L++ V+ + ++
Sbjct: 427 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYT 486
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y ++ G G E +F ++ G+ P+ + +I+ + G ++A F+ M+
Sbjct: 487 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 546
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLA 387
+ G P+ ++ A ++ + E + ++ GF VG ++ ++
Sbjct: 547 EDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGF-VGDASTISMV 595
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 75/170 (44%), Gaps = 1/170 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + +I Y+ ++ G K +++ A +++ D T +M+ KAG
Sbjct: 440 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 499
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ + F + L G + Y +M+ + R G+ + + L REM S Y
Sbjct: 500 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNT 559
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAY 330
L+R +G+ + + + ++ G DA +++IN G+ +K+Y
Sbjct: 560 LIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLH-DGRLEKSY 608
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 73/186 (39%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
N Y +I G + A+ M G D +T ++++ K G L+ A
Sbjct: 412 GNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVV 471
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
FE ++ D +Y M+ +AG ++ G L + + V +Y ++ G+
Sbjct: 472 FEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCR 531
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G E A +F ++ G P++ LI A G + + MR G
Sbjct: 532 KGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDAST 591
Query: 348 VALILS 353
++++++
Sbjct: 592 ISMVIN 597
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 56/288 (19%), Positives = 116/288 (40%), Gaps = 22/288 (7%)
Query: 115 PETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLME------------HPLYLQ---VAEL 159
P+ LS LL + R ++ +A++ Q+ +ME H L+L +
Sbjct: 132 PDIVTLSSLLNGYCH--GKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAV 189
Query: 160 ALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
AL++ + ++ Y +++G K+ I A + L M++ D V T ++
Sbjct: 190 ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDAL 249
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
N+ A F E+ G + +Y S++ G LL +M +++
Sbjct: 250 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 309
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
+ AL+ + G A+++++ + I PD + LIN + M + +A F+
Sbjct: 310 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 369
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEAS 383
M P+ ++ K ++ +E ++ + G +VG +
Sbjct: 370 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRG-LVGNTVT 416
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 113/246 (45%), Gaps = 2/246 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E N+ ++ +I + K+ ++ AE M +R D T + ++ +
Sbjct: 316 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 375
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV-YK 279
L A+ FE + + +Y +++ + +A ++ G L REM +Q VG+ V Y
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM-SQRGLVGNTVTYN 434
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L++G G+ + AQ++F+ + G+ PD ++L++ G+ +KA F+ ++K+
Sbjct: 435 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 494
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEV 399
+EP +++ K ++ + L G T+ + F R G+ EE
Sbjct: 495 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 554
Query: 400 EHVLRE 405
+ + RE
Sbjct: 555 DALFRE 560
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 105/230 (45%), Gaps = 2/230 (0%)
Query: 158 ELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSK 217
EL + ++ F N+ Y +I G+ K +++ M +RG + + VT ++ +
Sbjct: 384 ELMISKDCF-PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 442
Query: 218 AGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
AG+ MA++ F+++ G P D +Y ++ + G L++ V+ + ++
Sbjct: 443 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYT 502
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y ++ G G E +F ++ G+ P+ + +I+ + G ++A F+ M+
Sbjct: 503 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 562
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLA 387
+ G P C ++ A ++ + E + ++ GF VG ++ ++
Sbjct: 563 EDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGF-VGDASTISMV 611
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 75/170 (44%), Gaps = 1/170 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + +I Y+ ++ G K +++ A +++ D T +M+ KAG
Sbjct: 456 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ + F + L G + Y +M+ + R G+ + + L REM S Y
Sbjct: 516 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNT 575
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAY 330
L+R +G+ + + + ++ G DA +++IN G+ +K+Y
Sbjct: 576 LIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLH-DGRLEKSY 624
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 73/186 (39%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
N Y +I G + A+ M G D +T ++++ K G L+ A
Sbjct: 428 GNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVV 487
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
FE ++ D +Y M+ +AG ++ G L + + V +Y ++ G+
Sbjct: 488 FEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCR 547
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G E A +F ++ G PD+ LI A G + + MR G
Sbjct: 548 KGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDAST 607
Query: 348 VALILS 353
++++++
Sbjct: 608 ISMVIN 613
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 54/288 (18%), Positives = 115/288 (39%), Gaps = 22/288 (7%)
Query: 115 PETGNLSDLLAAWVRFMKPRRADWLAVLKQL------------KLMEHPLYLQ---VAEL 159
P+ LS LL + R +D +A++ Q+ + H L+L +
Sbjct: 148 PDIVTLSSLLNGYCH--SKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAV 205
Query: 160 ALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
AL+++ + ++ Y +++G K+ I A + L M++ D V ++
Sbjct: 206 ALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGL 265
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
K ++ A F +++ G D +Y S++ G LL M +++
Sbjct: 266 CKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNV 325
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
+ AL+ + G A+++++ + I PD + LIN + M + +A F+
Sbjct: 326 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 385
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEAS 383
M P+ ++ K ++ +E ++ + G +VG +
Sbjct: 386 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRG-LVGNTVT 432
>gi|255580475|ref|XP_002531063.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529358|gb|EEF31324.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 102/238 (42%), Gaps = 2/238 (0%)
Query: 139 LAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKR 198
L VLK+L L L + A ++ F N Y +I GK Q N + MKR
Sbjct: 117 LEVLKRLS-NAGALALSFFKWAEKQKGFMYNTESYNALIDSLGKIKQFNMIWNLVNDMKR 175
Query: 199 RGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDR 258
+G + + T ++ Y+++G +K A TFE+++ G ++ + ++ +++ +
Sbjct: 176 KGVLTKE-TFALISRRYARSGKVKEAMNTFEKMEKFGLKIESTDFNRLLDTLIKSRQVLS 234
Query: 259 GEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLIN 318
+ + +M + + Y LL G+ N V+ ++ G PD +LIN
Sbjct: 235 AQNVFDKMKIRRFVPDIKSYTILLEGWGQEKNLLKLDEVYREMKDEGFEPDVVTYGILIN 294
Query: 319 AYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
AY + A F+ M +PS +++ +L+ ALEF + GF
Sbjct: 295 AYCKVRKYDDAIELFREMESKNCQPSPHIFCTLINGLGSVRRLSEALEFFRRSKASGF 352
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 12/200 (6%)
Query: 172 DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEI 231
D+ +++ K Q+ +A+N MK R F+ D + T+++ + + NL +E + E+
Sbjct: 218 DFNRLLDTLIKSRQVLSAQNVFDKMKIRRFVPDIKSYTILLEGWGQEKNLLKLDEVYREM 277
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
K G D +YG ++ AY + D L REM+++ ++ L+ G
Sbjct: 278 KDEGFEPDVVTYGILINAYCKVRKYDDAIELFREMESKNCQPSPHIFCTLINGLG----- 332
Query: 292 EGAQRVFEAIQF------AGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
+R+ EA++F +G P+ ++ AY + + AY MRK+G+ P+
Sbjct: 333 -SVRRLSEALEFFRRSKASGFAPETPTYNAVVGAYCWSMRIDDAYRMVDEMRKSGVGPNS 391
Query: 346 KCVALILSACEKENQLNRAL 365
+ +IL K + A
Sbjct: 392 RTYDIILHHLIKAEKTTEAF 411
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 71/172 (41%), Gaps = 1/172 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+ +I+G G ++ A K GF + T +V Y + + A +E++
Sbjct: 324 FCTLINGLGSVRRLSEALEFFRRSKASGFAPETPTYNAVVGAYCWSMRIDDAYRMVDEMR 383
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE-VYVGSEVYKALLRGYSMNGNS 291
G + R+Y ++ ++A + +M ++E Y ++R +
Sbjct: 384 KSGVGPNSRTYDIILHHLIKAEKTTEAFSVFEKMSSEEECEPTVSTYDIIVRMFCNMDKV 443
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
E A +V++ ++ G+ P M ++LIN+ + A FQ M G+ P
Sbjct: 444 ESAIKVWDRMKAKGVHPGMHMFSILINSLCHENKLDIACKYFQEMLDVGIRP 495
>gi|225456802|ref|XP_002275673.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic [Vitis vinifera]
gi|147821419|emb|CAN76897.1| hypothetical protein VITISV_010606 [Vitis vinifera]
Length = 692
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 1/213 (0%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M+++G + + ++ YSK+ ++ AE F E+K G +Y ++ AY R
Sbjct: 339 MEKKGISSNAIVYNTLMDAYSKSNRVEEAEGLFGEMKAKGVMPTSATYNILMDAYSRRMQ 398
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN-SEGAQRVFEAIQFAGITPDARMCA 314
+ E LL EM + + Y L+ Y S+ A F ++ GI P +
Sbjct: 399 PEIIENLLLEMQDMGLEPNVKSYTCLISAYGRQKKMSDMAADAFLRMKKVGIKPTSHSYT 458
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
LI+AY + G +KAYTAF+NM++ G++PS + +L A + ++ + D
Sbjct: 459 ALIHAYSVGGWHEKAYTAFENMKREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMLSD 518
Query: 375 GFMVGKEASCTLAAWFKRLGVVEEVEHVLREYG 407
+ L F + G E V+ E+G
Sbjct: 519 KIEGTRVTFNILLDGFAKQGHYMEARDVIFEFG 551
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 98/234 (41%), Gaps = 1/234 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ Y K +++ AE MK +G + T +++ YS+ ++ E E++
Sbjct: 351 YNTLMDAYSKSNRVEEAEGLFGEMKAKGVMPTSATYNILMDAYSRRMQPEIIENLLLEMQ 410
Query: 233 LLGEPLDKRSYGSMVMAYVR-AGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
+G + +SY ++ AY R M D M + S Y AL+ YS+ G
Sbjct: 411 DMGLEPNVKSYTCLISAYGRQKKMSDMAADAFLRMKKVGIKPTSHSYTALIHAYSVGGWH 470
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALI 351
E A FE ++ GI P L++A++ AG +Q ++ M +E + ++
Sbjct: 471 EKAYTAFENMKREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMLSDKIEGTRVTFNIL 530
Query: 352 LSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
L K+ A + + + + GF L + R G + +L+E
Sbjct: 531 LDGFAKQGHYMEARDVIFEFGKIGFQPTVMTYNMLMNAYARGGQHSRLPQLLKE 584
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 114/264 (43%), Gaps = 19/264 (7%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRD 172
V P + + L+ A+ R M+P +++E+ L L++ ++ L E N++
Sbjct: 379 VMPTSATYNILMDAYSRRMQP------------EIIEN-LLLEMQDMGL-----EPNVKS 420
Query: 173 YTKIIHGYGKKMQIQN-AENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEI 231
YT +I YG++ ++ + A + L MK+ G + T ++ YS G + A FE +
Sbjct: 421 YTCLISAYGRQKKMSDMAADAFLRMKKVGIKPTSHSYTALIHAYSVGGWHEKAYTAFENM 480
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
K G +Y +++ A+ RAG + + M + ++ + LL G++ G+
Sbjct: 481 KREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMLSDKIEGTRVTFNILLDGFAKQGHY 540
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALI 351
A+ V G P +L+NAY GQ + + M L+P + +
Sbjct: 541 MEARDVIFEFGKIGFQPTVMTYNMLMNAYARGGQHSRLPQLLKEMTSLNLKPDSITYSTM 600
Query: 352 LSACEKENQLNRALEFLIDLERDG 375
+ A + RA + + + G
Sbjct: 601 IYAYVRVRDFKRAFFYHKQMVKSG 624
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 8/210 (3%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN-LKMAEET 227
++R Y I G + +A M+ D VT ++M+ + K G+ K A E
Sbjct: 241 DVRIYNSAISGLSSCGRYDDAWKVYDEMETNNIRPDHVTCSIMITVMRKDGHSAKDAWEF 300
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
F+ + G G+++ ++ G+ + ++ EM+ + + + VY L+ YS
Sbjct: 301 FQRMNRKGVKWSLEVLGALIKSFCDEGLKNEALIIQSEMEKKGISSNAIVYNTLMDAYSK 360
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
+ E A+ +F ++ G+ P + +L++AY Q + M+ GLEP+ K
Sbjct: 361 SNRVEEAEGLFGEMKAKGVMPTSATYNILMDAYSRRMQPEIIENLLLEMQDMGLEPNVKS 420
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFM 377
++SA ++ +++ D+ D F+
Sbjct: 421 YTCLISAYGRQKKMS-------DMAADAFL 443
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 75/156 (48%), Gaps = 3/156 (1%)
Query: 252 RAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDAR 311
RAGM D VLLR + + +Y + + G S G + A +V++ ++ I PD
Sbjct: 219 RAGMGDDLMVLLRNLPKTRQFRDVRIYNSAISGLSSCGRYDDAWKVYDEMETNNIRPDHV 278
Query: 312 MCALLINAYQMAGQSQK-AYTAFQNMRKAGLEPSDKCV-ALILSACEKENQLNRALEFLI 369
C+++I + G S K A+ FQ M + G++ S + + ALI S C+ E N AL
Sbjct: 279 TCSIMITVMRKDGHSAKDAWEFFQRMNRKGVKWSLEVLGALIKSFCD-EGLKNEALIIQS 337
Query: 370 DLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++E+ G TL + + VEE E + E
Sbjct: 338 EMEKKGISSNAIVYNTLMDAYSKSNRVEEAEGLFGE 373
>gi|3107905|dbj|BAA25906.1| leaf protein [Ipomoea nil]
Length = 665
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 113/251 (45%), Gaps = 5/251 (1%)
Query: 106 FVKQIICVSPETGNLSDLLAAWVRF----MKPRRADWLAVLKQLKLMEHPL-YLQVAELA 160
F +I E+GN+ + + + + KP + + A++K ++ P ++ E+
Sbjct: 140 FFNPMINAFCESGNVKEAMKIFRKMREKGCKPTASTFNALIKGFGIIGKPEESSKLLEIM 199
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
EE+ + + R Y ++ + K I+ A + M G D VT + Y++
Sbjct: 200 SREENIKPDDRTYNILVQAWCNKNNIEKAWGVVHRMVGAGLKPDVVTYNTIARAYARGKE 259
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A E +++ + R+ G +V Y + G + + +M V+ ++ +
Sbjct: 260 TSRAAELISQMQNNKVAPNVRTCGIVVDGYSKEGNMADALKFIYKMQGFGVHPNLFIFNS 319
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL+G+ +++G +Q G+ PD + ++NA+ AG +K FQ+M K+G
Sbjct: 320 LLKGFLDITDTKGVDETLTLMQEFGVKPDVVTYSTIMNAWSSAGLMEKCEEMFQDMIKSG 379
Query: 341 LEPSDKCVALI 351
+EP + +++
Sbjct: 380 IEPDNHAFSIL 390
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 86/202 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ + ++ G+ + + TL M+ G D VT + ++ +S AG ++ EE F
Sbjct: 313 NLFIFNSLLKGFLDITDTKGVDETLTLMQEFGVKPDVVTYSTIMNAWSSAGLMEKCEEMF 372
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+++ G D ++ + YVRAG + E LL M + ++ ++ G+
Sbjct: 373 QDMIKSGIEPDNHAFSILAKGYVRAGEPKKAEALLEAMATHGAHPNVVMFTTIISGWCSA 432
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A RV++ + + P+ LI Y A + KA Q M + G+ P V
Sbjct: 433 AKMEDALRVYDRMCRMDVQPNLNTFETLIWGYGEANEPWKAEELLQIMEEMGVLPRKNTV 492
Query: 349 ALILSACEKENQLNRALEFLID 370
L+ A +N A L D
Sbjct: 493 QLVADAWRAIGFINEAKRILND 514
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/237 (18%), Positives = 107/237 (45%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+R ++ GY K+ + +A + M+ G + ++ + + K +ET
Sbjct: 278 NVRTCGIVVDGYSKEGNMADALKFIYKMQGFGVHPNLFIFNSLLKGFLDITDTKGVDETL 337
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ G D +Y +++ A+ AG++++ E + ++M + + + L +GY
Sbjct: 338 TLMQEFGVKPDVVTYSTIMNAWSSAGLMEKCEEMFQDMIKSGIEPDNHAFSILAKGYVRA 397
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A+ + EA+ G P+ M +I+ + A + + A + M + ++P+
Sbjct: 398 GEPKKAEALLEAMATHGAHPNVVMFTTIISGWCSAAKMEDALRVYDRMCRMDVQPNLNTF 457
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ + N+ +A E L +E G + K +A ++ +G + E + +L +
Sbjct: 458 ETLIWGYGEANEPWKAEELLQIMEEMGVLPRKNTVQLVADAWRAIGFINEAKRILND 514
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/263 (19%), Positives = 110/263 (41%), Gaps = 7/263 (2%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
L EE + YT ++ + + ++ L +++ G D + M+ + ++G
Sbjct: 93 GLTEEGHRPTLVTYTTVLAALTLQKRFKSIPLLLKKVEQNGLRPDSIFFNPMINAFCESG 152
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE-VYVGSEVY 278
N+K A + F +++ G ++ +++ + G + LL M +E + Y
Sbjct: 153 NVKEAMKIFRKMREKGCKPTASTFNALIKGFGIIGKPEESSKLLEIMSREENIKPDDRTY 212
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
L++ + N E A V + AG+ PD + AY ++ +A M+
Sbjct: 213 NILVQAWCNKNNIEKAWGVVHRMVGAGLKPDVVTYNTIARAYARGKETSRAAELISQMQN 272
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGV--- 395
+ P+ + +++ KE + AL+F+ ++ G +L F +
Sbjct: 273 NKVAPNVRTCGIVVDGYSKEGNMADALKFIYKMQGFGVHPNLFIFNSLLKGFLDITDTKG 332
Query: 396 VEEVEHVLREYGLRE---TYSKI 415
V+E +++E+G++ TYS I
Sbjct: 333 VDETLTLMQEFGVKPDVVTYSTI 355
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/206 (19%), Positives = 87/206 (42%), Gaps = 1/206 (0%)
Query: 170 IRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFE 229
+R TK++ ++ + Q + + G VT T ++ + K +
Sbjct: 68 VRSRTKLMKTLIERGKPQEVHSITKGLTEEGHRPTLVTYTTVLAALTLQKRFKSIPLLLK 127
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
+++ G D + M+ A+ +G + + R+M + + + AL++G+ + G
Sbjct: 128 KVEQNGLRPDSIFFNPMINAFCESGNVKEAMKIFRKMREKGCKPTASTFNALIKGFGIIG 187
Query: 290 NSEGAQRVFEAI-QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E + ++ E + + I PD R +L+ A+ +KA+ M AGL+P
Sbjct: 188 KPEESSKLLEIMSREENIKPDDRTYNILVQAWCNKNNIEKAWGVVHRMVGAGLKPDVVTY 247
Query: 349 ALILSACEKENQLNRALEFLIDLERD 374
I A + + +RA E + ++ +
Sbjct: 248 NTIARAYARGKETSRAAELISQMQNN 273
>gi|410110145|gb|AFV61152.1| pentatricopeptide repeat-containing protein 123, partial [Nashia
inaguensis]
Length = 433
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 102/219 (46%), Gaps = 4/219 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 216 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDR 275
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ + +M++AY RAG++ + LL E+ + + + +L
Sbjct: 276 AAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDTAIHILA 334
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + F R G P
Sbjct: 335 G---AGRIEEATYVFRQAIDAGXVKDITVFERMIHLLSKYKKYSNVVEVFDKXRGLGYFP 391
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEA 382
+A++L+A K + ++A + ++++ G + E
Sbjct: 392 DSDVIAIVLNAYGKLQEFDKANDVYMEMQEVGCVFSDEV 430
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 101/237 (42%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 116 NTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 175
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G SY +++ Y A + L R M + + Y +++ Y
Sbjct: 176 WGMRKMGIEPSVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 235
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G+E
Sbjct: 236 LEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILF 295
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE +V R+
Sbjct: 296 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAG----AGRIEEATYVFRQ 348
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 102/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + MK G + + + + ++ MY + A
Sbjct: 78 FXPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEAL 137
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 138 SVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPSVVSYNTLLRVY 197
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + ++ Y + +KA Q M+ G+E
Sbjct: 198 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIE 254
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 255 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRL 314
Query: 403 LRE 405
L E
Sbjct: 315 LHE 317
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ A + L M++ D + + ++ + K + A F +K
Sbjct: 15 YSTLITHFGKEGLFDAAXSWLQKMEQDQVPGDLILYSNLIELSXKLCDYSKAISIFSRLK 74
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +M+ + +A + L+ EM V + Y LL Y N
Sbjct: 75 RSGFXPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFL 134
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF ++ D C ++I+ Y G +++A F MRK G+EPS
Sbjct: 135 EALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPS 186
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 30/172 (17%), Positives = 76/172 (44%), Gaps = 2/172 (1%)
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
D+ +Y +++ + + G+ D L++M+ +V +Y L+ + A +F
Sbjct: 11 DRYTYSTLITHFGKEGLFDAAXSWLQKMEQDQVPGDLILYSNLIELSXKLCDYSKAISIF 70
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
++ +G PD +IN + A ++A + M+ AG+ P+ + +L+ +
Sbjct: 71 SRLKRSGFXPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVEN 130
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRE 410
+ AL ++ ++ + + +LG+ +E + + +G+R+
Sbjct: 131 KKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF--WGMRK 180
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 114/261 (43%), Gaps = 4/261 (1%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + N YT ++ GY K + + L +M G D +++ S++ N
Sbjct: 586 MLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSEN 645
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+++A E++ G D Y S++ + +++ LL EM + + G Y A
Sbjct: 646 MEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNA 705
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G+ +G+ A+ VF++I G+ P+ LI+ G A+ +++M G
Sbjct: 706 LIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRG 765
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+ P ++ + C L +AL ++ G+ S TL F + G ++E E
Sbjct: 766 IAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAHVSLFS-TLVRGFCKRGRLQETE 824
Query: 401 HVLREYGLRETYSKIPGSRSI 421
+L RE +P ++++
Sbjct: 825 KLLHVMMDREI---VPNAQTV 842
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 106/243 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ E + N Y +I G+ K+ I A +L M + + D ++ S G
Sbjct: 481 MISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGR 540
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ AEE + +++ G D+ +Y ++ Y + L++ + LL++M + ++ Y
Sbjct: 541 IEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTD 600
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL GY + + E + +++ +G PD + ++I + + A+ + K G
Sbjct: 601 LLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNG 660
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
L P + ++S K + +A+ L ++ ++G G L F R G +
Sbjct: 661 LVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRAR 720
Query: 401 HVL 403
+V
Sbjct: 721 NVF 723
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/237 (18%), Positives = 101/237 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y +I+G + + + A N L M G + +++ +SK G++ +A E+
Sbjct: 454 NAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESL 513
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E + D Y S++ G ++ E ++ + + Y L+ GY
Sbjct: 514 ENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKT 573
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
N E A ++ + + +G+ P+A L+ Y + +K + Q+M +G +P +
Sbjct: 574 RNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIY 633
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+++ + + A L ++E++G + +L + ++ +E+ +L E
Sbjct: 634 GIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDE 690
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 114/266 (42%), Gaps = 10/266 (3%)
Query: 160 ALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
ALL+E + N+ Y ++ G+ K+ + A + L M G +++ ++
Sbjct: 336 ALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGL 395
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
K G L A + E+ +G D +Y ++ + + D LL EM + +
Sbjct: 396 CKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNA 455
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
Y ++ G NG S+ A + E + G+ P+A M A LI + G A + +N
Sbjct: 456 YTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLEN 515
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGV 395
M KA + P C ++ ++ A E+ +++ G + + L + +
Sbjct: 516 MTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRN 575
Query: 396 VEEVEHVLREY---GLR---ETYSKI 415
+E+ + +L++ GL+ +TY+ +
Sbjct: 576 LEKADQLLQQMLNSGLKPNADTYTDL 601
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 84/209 (40%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y+ + + K A+ M+RR ++VT VM+ ++G ++ A
Sbjct: 244 DVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFK 303
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
EE+ G D +YG+++ + G L + LL EM + VY L+ G+
Sbjct: 304 EEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKE 363
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A + + AG+ P+ M LI GQ +A M K G P
Sbjct: 364 GKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTY 423
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFM 377
++ + + A E L ++ G +
Sbjct: 424 HPLMQGHFQHYDKDGAFELLNEMRNSGIL 452
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 84/180 (46%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M+ G D T + + + KA + A++ FEE++ +++ +Y M+ R+G
Sbjct: 236 MEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGA 295
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
++ EM + + Y AL+ G G + A+ + + + +G+ P+ + A
Sbjct: 296 VEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYAT 355
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
L++ + G++ +A+ M AG++P+ ++ K QL RA + L ++ + G
Sbjct: 356 LVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVG 415
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 75/188 (39%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ G+ + A L M+ G + + T +M+ + G K A EE+
Sbjct: 423 YHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMI 482
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + Y +++ + + G + L M V Y +L++G S G E
Sbjct: 483 SEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIE 542
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ + +Q G+ PD + LI+ Y +KA Q M +GL+P+ +L
Sbjct: 543 EAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLL 602
Query: 353 SACEKENQ 360
K N
Sbjct: 603 EGYFKSND 610
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 81/186 (43%), Gaps = 3/186 (1%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+E E I Y +I G+ + I A N ++ +G + + VT T ++ K G++
Sbjct: 693 KEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDIT 752
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A + ++++ G D Y + A L++ L EM Y ++ L+
Sbjct: 753 DAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEM-FNRGYAHVSLFSTLV 811
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM--RKAG 340
RG+ G + +++ + I P+A+ +I + AG+ +A+ F + +KA
Sbjct: 812 RGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQKKAS 871
Query: 341 LEPSDK 346
+D+
Sbjct: 872 QSSTDR 877
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 93/232 (40%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G K Q+ A L M + G D T ++ + + + A E E++
Sbjct: 388 YDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMR 447
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +YG M+ + G LL EM ++ + + +Y L+ G+S G+
Sbjct: 448 NSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHIS 507
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A E + A + PD LI G+ ++A + ++K GL P + + ++
Sbjct: 508 LACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLI 567
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
K L +A + L + G + L + + E+V +L+
Sbjct: 568 HGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQ 619
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 71/171 (41%)
Query: 235 GEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGA 294
G P D +Y + + A+ +A D + + EM ++ + Y ++ G +G E A
Sbjct: 240 GIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEA 299
Query: 295 QRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSA 354
E + G++PDA L+N G+ ++A M +GL+P+ A ++
Sbjct: 300 FGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDG 359
Query: 355 CEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
KE + A + L ++ G K L ++G + +L E
Sbjct: 360 FMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNE 410
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 59/149 (39%), Gaps = 13/149 (8%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
++L + N YT +I G K I +A + M RG D V+ S A
Sbjct: 725 SILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAA 784
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYG------SMVMAYVRAGMLDRGEVLLREMDAQEVYV 273
+L E+ L E + R Y ++V + + G L E LL M +E+
Sbjct: 785 DL-------EQALFLTEEMFNRGYAHVSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVP 837
Query: 274 GSEVYKALLRGYSMNGNSEGAQRVFEAIQ 302
++ + ++ + G A RVF +Q
Sbjct: 838 NAQTVENVITEFGKAGKLCEAHRVFAELQ 866
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 113/242 (46%), Gaps = 3/242 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+GY + +++ A +T MK R D +T ++ KA + A++ E++
Sbjct: 241 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 300
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G ++ +++ AY R G L++ ++L EM + Y +++ + NG
Sbjct: 301 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 360
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + + + P+A++ +I+AY G + +A+ + M+ G+ PS L++
Sbjct: 361 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 420
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE---EVEHVLREYGLR 409
++Q++ A E + L + + TL + G ++ +++ + +YG++
Sbjct: 421 KGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIK 480
Query: 410 ET 411
T
Sbjct: 481 ST 482
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 107/272 (39%), Gaps = 35/272 (12%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y +I G + + +A M R + + +T M+ + K G+L+
Sbjct: 62 NAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLR 121
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+++ G + +Y ++ RAG + LL EM +Q++ Y L G S N
Sbjct: 122 DQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRN 181
Query: 289 GNSEG-----------------------------------AQRVFEAIQFAGITPDARMC 313
G+S+ A+ V +++ AG+ P +
Sbjct: 182 GDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIY 241
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
LIN Y G+ + A++ F M+ ++P +++ K ++ A + L++++
Sbjct: 242 NTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQD 301
Query: 374 DGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+G E TL + R G +E+ VL E
Sbjct: 302 NGVNPTVETFNTLIDAYGRTGQLEKCFIVLSE 333
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 75/174 (43%)
Query: 198 RRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLD 257
+ G T ++++ K G + +AEE + + G + Y +++ Y + G L+
Sbjct: 196 KNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELE 255
Query: 258 RGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
+M ++ + Y AL+ G AQ + +Q G+ P LI
Sbjct: 256 GAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLI 315
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDL 371
+AY GQ +K + M++ GL+P+ I++A K ++ A+ L D+
Sbjct: 316 DAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDM 369
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 44/242 (18%), Positives = 92/242 (38%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ N Y ++ G + ++ L M + + D T +++ S+ G+ K
Sbjct: 127 HGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKA 186
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
F + G + + ++ + G + E +L+ + + +Y L+
Sbjct: 187 MLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLIN 246
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
GY G EGA F ++ I PD LIN A + A M+ G+ P
Sbjct: 247 GYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNP 306
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+ + ++ A + QL + L +++ +G + ++ F + G + E +L
Sbjct: 307 TVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAIL 366
Query: 404 RE 405
+
Sbjct: 367 DD 368
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 51/121 (42%)
Query: 170 IRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFE 229
I Y +I G + QI AE + ++ I D V+ ++ GN+ A + +
Sbjct: 413 IVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQ 472
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
+ G R+Y ++ AG L+ E L ++M V + ++ ++ YS G
Sbjct: 473 RMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYG 532
Query: 290 N 290
N
Sbjct: 533 N 533
>gi|218193284|gb|EEC75711.1| hypothetical protein OsI_12542 [Oryza sativa Indica Group]
Length = 1031
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 105/231 (45%), Gaps = 7/231 (3%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT ++ G+ K+ +I A L M +G + D + T ++ G +K A F+EI
Sbjct: 637 YTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEI- 695
Query: 233 LLGEPL--DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
+ E L D +Y SM+ Y++ G ++ E L+R M EVY S Y L+ GY G
Sbjct: 696 ICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQ 755
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM--RKAGLEPSD-KC 347
++ + GI PD LLI G + A + M ++GL+P
Sbjct: 756 LSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHY 815
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
+ALI + C + ++ A E D++ G + + A ++ + G VEE
Sbjct: 816 IALINAKC-RVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEE 865
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 103/256 (40%), Gaps = 26/256 (10%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y I++ Y KK + ++A L M++ G D T +M+ K LK + +
Sbjct: 263 NAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMI---DKLCKLKRSARAY 319
Query: 229 EEIKLLGE---PLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+K + E D+ SY +++ + G ++ + +M Q + Y AL+ GY
Sbjct: 320 LLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGY 379
Query: 286 SMNGNSEGAQRVFEAIQFA--------------------GITPDARMCALLINAYQMAGQ 325
NG ++ A+RV +Q GI PD + LIN G
Sbjct: 380 CRNGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALINGMCKMGM 439
Query: 326 SQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCT 385
+ M+K+G+ P++ ++ K AL++ +D+ R G +
Sbjct: 440 IHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNA 499
Query: 386 LAAWFKRLGVVEEVEH 401
L F R G++ E E
Sbjct: 500 LLCSFYREGMIAEAEQ 515
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 86/208 (41%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+L + + ++ Y+ +I+G K I + L M++ G + + V T +V + KAG
Sbjct: 414 CMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAG 473
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ K A + F +I G + + +++ ++ R GM+ E + M ++ +
Sbjct: 474 HAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFN 533
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
++ Y GN A V++ + G PD L+ G +A + +
Sbjct: 534 CIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEK 593
Query: 340 GLEPSDKCVALILSACEKENQLNRALEF 367
+K + +L K L+ AL+
Sbjct: 594 ACAIDEKTLNTLLVGICKHGTLDEALDL 621
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 104/255 (40%), Gaps = 6/255 (2%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
AN + ++ + ++ I AE M R D + ++ Y + GN+ A
Sbjct: 492 ANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSV 551
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
++ + G P D +YGS++ + G L + + + + + + + LL G
Sbjct: 552 YDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICK 611
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
+G + A + E + I PD +L++ + G+ A Q M + GL P
Sbjct: 612 HGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIA 671
Query: 348 VALILSACEKENQLNRALEFLID--LERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+L+ E Q+ +A ++ + ++G A ++ + + G + E+E ++R
Sbjct: 672 YTCLLNGLVNEGQV-KAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRN 730
Query: 406 YGLRETYSKIPGSRS 420
E Y P S S
Sbjct: 731 MHENEVY---PSSAS 742
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 103/236 (43%), Gaps = 4/236 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++HGY KK Q+ M + G D VT +++ + G +++A + E++
Sbjct: 743 YNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMV 802
Query: 233 LLGEPLDKRS--YGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA-LLRGYSMNG 289
L L + Y +++ A R G +D L +M A V V SEV ++ ++RG G
Sbjct: 803 LEESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGV-VPSEVAESSIVRGLCKCG 861
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
E A VF +I AG+ P L++ + A+ Q M GL+
Sbjct: 862 KVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYN 921
Query: 350 LILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++++ + + AL+ +++ G + TL G +++ E +L++
Sbjct: 922 VLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKD 977
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 106/260 (40%), Gaps = 24/260 (9%)
Query: 161 LLEESFEANIRDYTKIIHGYGK------------KMQI--------QNAENTLLAMKRRG 200
+L +S + ++ YT +I GY + +MQI A+ L M G
Sbjct: 360 MLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADG 419
Query: 201 FICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGE 260
D +T + ++ K G + +E ++ G + Y ++V + +AG
Sbjct: 420 IDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEAL 479
Query: 261 VLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAY 320
++ + S ++ ALL + G A++ + + I+ D +I++Y
Sbjct: 480 KYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSY 539
Query: 321 QMAGQSQKAYTAFQNMRKAGLEPSDKCV--ALILSACEKENQLNRALEFLIDLERDGFMV 378
G +A++ + NM + G P D C +L+ C+ L +A EF++ L +
Sbjct: 540 CQRGNVLEAFSVYDNMVRHGW-PPDICTYGSLLRGLCQG-GHLVQAKEFMVYLLEKACAI 597
Query: 379 GKEASCTLAAWFKRLGVVEE 398
++ TL + G ++E
Sbjct: 598 DEKTLNTLLVGICKHGTLDE 617
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 68/169 (40%), Gaps = 1/169 (0%)
Query: 237 PLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQR 296
PLD + ++ + G L + E +L++M + + Y +L Y G + A R
Sbjct: 227 PLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKKGRCKSALR 285
Query: 297 VFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACE 356
+ + ++ GI D ++I+ +S +AY + MR+ L P + ++
Sbjct: 286 ILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFF 345
Query: 357 KENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
E ++N A+ + R L + R G +E VL E
Sbjct: 346 GEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYE 394
>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 950
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 101/238 (42%), Gaps = 16/238 (6%)
Query: 153 YLQVAELALLEESFE---ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLT 209
YL AE LE S N Y+ +I G K I A++ M++ G + VT
Sbjct: 388 YLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFN 447
Query: 210 VMVVMYSKAGNLKMAEETFEEIKLLGEP-------------LDKRSYGSMVMAYVRAGML 256
++ KA L+ A F +++++ +P D S M+ +GM+
Sbjct: 448 SLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMI 507
Query: 257 DRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALL 316
+ LL ++ V Y L+ G+ GN GA ++F+ +Q G PD+ L
Sbjct: 508 LKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTL 567
Query: 317 INAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
I+ AG+++ A F+ M K G P I++ +EN ++ AL + RD
Sbjct: 568 IDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRD 625
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 104/246 (42%), Gaps = 2/246 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L+ + ++ Y +IHG K + Q+A M RG + +Q+ ++++ +A
Sbjct: 189 MLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKK 248
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A+ F +++ G D +Y ++ + ++G LD LL+ + +G Y
Sbjct: 249 IFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGC 308
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G E A ++ + I PD + ++I G+ +A T M + G
Sbjct: 309 LINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERG 368
Query: 341 LEPSDKCV-ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEV 399
L P C ALI C+ L+ A +++ + L + G++ +
Sbjct: 369 LRPDTICYNALIKGFCDM-GYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKA 427
Query: 400 EHVLRE 405
+H+ +E
Sbjct: 428 QHIFKE 433
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 66/164 (40%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+G + + + A M R D + T+M+ S+ G + A E+
Sbjct: 306 YGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMT 365
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D Y +++ + G LD E L E+ + + + Y L+ G NG
Sbjct: 366 ERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLIN 425
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
AQ +F+ ++ G P LIN A + ++A F M
Sbjct: 426 KAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQM 469
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/249 (18%), Positives = 99/249 (39%), Gaps = 19/249 (7%)
Query: 159 LALLEESFEANIRD----YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
L LL E E +R Y +I G+ + AE+ L + + + T ++++
Sbjct: 358 LTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICG 417
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMD------- 267
K G + A+ F+E++ LG ++ S++ +A L+ +L +M+
Sbjct: 418 MCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSL 477
Query: 268 -------AQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAY 320
+V+ + + + ++ +G A ++ + +G+ PD R +LIN +
Sbjct: 478 FLRLSQGTDKVFDIASL-QVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGF 536
Query: 321 QMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGK 380
G A+ F+ M+ G P ++ + + ALE + + G +
Sbjct: 537 CKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPES 596
Query: 381 EASCTLAAW 389
T+ W
Sbjct: 597 STYKTIMTW 605
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 88/206 (42%), Gaps = 6/206 (2%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ ++ G + +I +A+ M+ G D +T V++ + K+G L ++ F ++
Sbjct: 236 YSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYL---DDAFTLLQ 292
Query: 233 LL---GEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
LL G L YG ++ RA + + ++M + + +Y ++RG S G
Sbjct: 293 LLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEG 352
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
A + + G+ PD LI + G +A + + K P++ +
Sbjct: 353 RVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYS 412
Query: 350 LILSACEKENQLNRALEFLIDLERDG 375
+++ K +N+A ++E+ G
Sbjct: 413 ILICGMCKNGLINKAQHIFKEMEKLG 438
>gi|449469755|ref|XP_004152584.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Cucumis sativus]
Length = 708
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 102/222 (45%), Gaps = 4/222 (1%)
Query: 194 LAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRA 253
L M+++G + + ++ +SK+ ++ AE F E+K G S+ ++ AY R
Sbjct: 353 LEMEKKGVASNVIMYNTIMDAFSKSNQIEEAEGVFAEMKSKGVKPTSASFNILMNAYSRR 412
Query: 254 GMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN-SEGAQRVFEAIQFAGITPDARM 312
+ E LL EM + + Y L+ Y S+ A F ++ GI P +
Sbjct: 413 MQPEIVEKLLVEMKDMGLEPNVKSYTCLISAYGRQKKMSDMAADAFLRMKKNGIRPTSHS 472
Query: 313 CALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLE 372
LI+AY ++G +KAY+AF+NM + GL+PS + +L A + ++ +
Sbjct: 473 YTALIHAYSVSGWHEKAYSAFENMLREGLKPSIETYTTLLDAFRRAGDTVSLMKIWKLMI 532
Query: 373 RDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREY---GLRET 411
R+ + + TL F + G E V+ E+ GL+ T
Sbjct: 533 REKVLGTRVTFNTLLDGFAKHGHYVEARDVISEFDKIGLQPT 574
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 119/269 (44%), Gaps = 29/269 (10%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRD 172
V P + + + L+ A+ R M+P + L V ++ ++ L E N++
Sbjct: 395 VKPTSASFNILMNAYSRRMQPEIVEKLLV-------------EMKDMGL-----EPNVKS 436
Query: 173 YTKIIHGYGKKMQIQN-AENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEI 231
YT +I YG++ ++ + A + L MK+ G + T ++ YS +G + A FE +
Sbjct: 437 YTCLISAYGRQKKMSDMAADAFLRMKKNGIRPTSHSYTALIHAYSVSGWHEKAYSAFENM 496
Query: 232 KLLGEPLDKRSYGSMVMAYVRAG----MLDRGEVLLREMDAQEVYVGSEV-YKALLRGYS 286
G +Y +++ A+ RAG ++ ++++RE +G+ V + LL G++
Sbjct: 497 LREGLKPSIETYTTLLDAFRRAGDTVSLMKIWKLMIREK-----VLGTRVTFNTLLDGFA 551
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
+G+ A+ V G+ P +L+NAY GQ K Q M L+P
Sbjct: 552 KHGHYVEARDVISEFDKIGLQPTVMTYNMLMNAYARGGQHLKLPQLLQEMAARDLKPDSV 611
Query: 347 CVALILSACEKENQLNRALEFLIDLERDG 375
+ ++ A + RA + + + G
Sbjct: 612 TYSTMIYAFVRVRDFKRAFFYHKKMVKSG 640
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 79/172 (45%), Gaps = 1/172 (0%)
Query: 156 VAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
+ +L + ++ +N+ Y I+ + K QI+ AE MK +G + +++ Y
Sbjct: 350 ILQLEMEKKGVASNVIMYNTIMDAFSKSNQIEEAEGVFAEMKSKGVKPTSASFNILMNAY 409
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVR-AGMLDRGEVLLREMDAQEVYVG 274
S+ ++ E+ E+K +G + +SY ++ AY R M D M +
Sbjct: 410 SRRMQPEIVEKLLVEMKDMGLEPNVKSYTCLISAYGRQKKMSDMAADAFLRMKKNGIRPT 469
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
S Y AL+ YS++G E A FE + G+ P L++A++ AG +
Sbjct: 470 SHSYTALIHAYSVSGWHEKAYSAFENMLREGLKPSIETYTTLLDAFRRAGDT 521
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 122/263 (46%), Gaps = 11/263 (4%)
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG-N 220
L++ F+ ++ Y I G + +A AM+ D VT ++M+ + K G +
Sbjct: 251 LKKEFQ-DVHVYNSAISGLMVCKRYDDACKVYEAMETNNVNPDHVTCSIMITVMRKIGRS 309
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
K + + FE++ G G+++ ++ G+ + +L EM+ + V +Y
Sbjct: 310 AKDSWDYFEKMNQKGVKWSSEVLGALIKSFCDEGLKSQALILQLEMEKKGVASNVIMYNT 369
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ +S + E A+ VF ++ G+ P + +L+NAY Q + M+ G
Sbjct: 370 IMDAFSKSNQIEEAEGVFAEMKSKGVKPTSASFNILMNAYSRRMQPEIVEKLLVEMKDMG 429
Query: 341 LEPSDKCVALILSACEKENQL-NRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEV 399
LEP+ K ++SA ++ ++ + A + + ++++G + L + G E+
Sbjct: 430 LEPNVKSYTCLISAYGRQKKMSDMAADAFLRMKKNGIRPTSHSYTALIHAYSVSGWHEKA 489
Query: 400 ----EHVLREYGLR---ETYSKI 415
E++LRE GL+ ETY+ +
Sbjct: 490 YSAFENMLRE-GLKPSIETYTTL 511
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 84/167 (50%), Gaps = 3/167 (1%)
Query: 241 RSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEA 300
R+Y + RAGM ++ VL + + ++ + VY + + G + + A +V+EA
Sbjct: 224 RAYSLLFPLLGRAGMGEKIMVLFKNLPLKKEFQDVHVYNSAISGLMVCKRYDDACKVYEA 283
Query: 301 IQFAGITPDARMCALLINAYQMAGQSQK-AYTAFQNMRKAGLEPSDKCV-ALILSACEKE 358
++ + PD C+++I + G+S K ++ F+ M + G++ S + + ALI S C+ E
Sbjct: 284 METNNVNPDHVTCSIMITVMRKIGRSAKDSWDYFEKMNQKGVKWSSEVLGALIKSFCD-E 342
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++AL +++E+ G T+ F + +EE E V E
Sbjct: 343 GLKSQALILQLEMEKKGVASNVIMYNTIMDAFSKSNQIEEAEGVFAE 389
>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
Length = 741
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 93/244 (38%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+LL + YT + GY + +A L M +RG T ++ AG
Sbjct: 99 SLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAG 158
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A F + G D Y MV AG LL + + VY
Sbjct: 159 MVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYN 218
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
AL+ GY G+ E A +F+ +Q G P+ R LI + +G+ ++A + M +A
Sbjct: 219 ALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEA 278
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEV 399
GL P+ ++ E L A L +E G + L + G +EE
Sbjct: 279 GLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEA 338
Query: 400 EHVL 403
+ L
Sbjct: 339 QQFL 342
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/205 (20%), Positives = 95/205 (46%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ ++HG + A L +GF+ + ++ Y G+L++A + F+ ++
Sbjct: 182 YSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQ 241
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + R+Y ++ + ++G ++R VL M + Y L++G G+ E
Sbjct: 242 SKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLE 301
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A R+ +++ G+ P+ C +LI+A G+ ++A ++ + G++ + ++
Sbjct: 302 HAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMI 361
Query: 353 SACEKENQLNRALEFLIDLERDGFM 377
A K + + A + + +GF+
Sbjct: 362 DALCKSGKFDGAHNLMQKIITEGFV 386
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 84/220 (38%), Gaps = 13/220 (5%)
Query: 191 NTLL-AMKRRGFICDQVTL------------TVMVVMYSKAGNLKMAEETFEEIKLLGEP 237
NTLL A+ R G + D +L T ++ Y AG+L A+ + G
Sbjct: 47 NTLLMALARHGMLSDMESLAARMPVRNLHTYTTLINAYCHAGDLPAAKRHLSSLLRAGLA 106
Query: 238 LDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRV 297
D +Y S V+ Y R G+ L M + Y ALL+G G A V
Sbjct: 107 PDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVREAMAV 166
Query: 298 FEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEK 357
F + G PD+ + +++++ AG++ +A + G P+ ++
Sbjct: 167 FAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCS 226
Query: 358 ENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
L A++ ++ G + L F + G VE
Sbjct: 227 TGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVE 266
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 80/174 (45%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+R YT++I G+ K +++ A M G + VT T ++ G+L+ A
Sbjct: 248 NVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLL 307
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ G ++ + ++ A + G ++ + L + + + V +Y +++ +
Sbjct: 308 HSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKS 367
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G +GA + + I G PDA M + LI+ + +A + +M ++G++
Sbjct: 368 GKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQ 421
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 89/212 (41%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ F N+ Y +I GY ++ A + M+ +G + + T T ++ + K+G ++
Sbjct: 208 KGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVER 267
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A + + G + +Y +++ G L+ LL M+A + L+
Sbjct: 268 AMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLID 327
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
+G E AQ+ ++ GI + + +I+A +G+ A+ Q + G P
Sbjct: 328 ALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVP 387
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDG 375
+ ++ +EN+L A+ L D+ G
Sbjct: 388 DAHMYSSLIDGLCRENKLLEAISLLNDMIESG 419
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 83/201 (41%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+L+++ + N YT +I K + A N + + GF+ D + ++ +
Sbjct: 344 SLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCREN 403
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
L A ++ G + + ++ ++R D +++ M A V Y
Sbjct: 404 KLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYT 463
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
+R Y +G E A+ + + G+ P+ LI Y G +A+++ +NM
Sbjct: 464 VFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDN 523
Query: 340 GLEPSDKCVALILSACEKENQ 360
G +P+D+ ++L K+N
Sbjct: 524 GCKPNDESYTVLLGLLLKKNS 544
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 122/305 (40%), Gaps = 15/305 (4%)
Query: 50 RSGPALEAIKAEDMGKTQVKDDTSMFTWIQIGPNITEEQKQAISQFPRKMTKRCKAFVK- 108
R+G A+ A+ + MGK V + +++ + G T + + AI F +K C V+
Sbjct: 194 RAGEAV-ALLTDAMGKGFVPN-VAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRT 251
Query: 109 --QIICVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQL-------KLMEHPLYLQVAEL 159
Q+IC ++G + + + R ++ A + L +EH L +
Sbjct: 252 YTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSME 311
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
A N +I K +I+ A+ L ++ ++G +QV T M+ K+G
Sbjct: 312 AC---GLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSG 368
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
A ++I G D Y S++ R L LL +M V + +
Sbjct: 369 KFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFT 428
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ + S+ + + + + AG+ PD + I +Y G+ + A + M
Sbjct: 429 ILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDH 488
Query: 340 GLEPS 344
G+ P+
Sbjct: 489 GVRPN 493
>gi|42573413|ref|NP_974803.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214363|sp|Q3E9F0.1|PP392_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g18475
gi|110737103|dbj|BAF00503.1| hypothetical protein [Arabidopsis thaliana]
gi|332005185|gb|AED92568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 506
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 83/171 (48%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+ +I+G+ + +++ A+ L MK+ G + + ++ + K G ++ A++TF+E+K
Sbjct: 271 FNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVK 330
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G LD Y +++ + R G D LL EM A + Y +LRG S G SE
Sbjct: 331 KTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSE 390
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
A ++ + G+ + +++NA G+ +KA M + G+ P
Sbjct: 391 EALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWP 441
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 74/165 (44%), Gaps = 2/165 (1%)
Query: 243 YGSMVMAYVRAGMLDRGEVLLREMDAQEV-YVGSEVYKALLRGYSMNGNSEGAQRVFE-A 300
+ +V + + G ++ +++ EM + Y S Y L+ + S+ A +FE
Sbjct: 199 FNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDM 258
Query: 301 IQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQ 360
I GI+PD ++IN + AG+ ++A M+K G P+ + +++ K +
Sbjct: 259 ISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGK 318
Query: 361 LNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ A + ++++ G + TL F R G +E +L E
Sbjct: 319 IQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGE 363
>gi|255660934|gb|ACU25636.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 484
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 102/217 (47%), Gaps = 2/217 (0%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
FE N + KII G+ ++ +A LL M ++G D+ +M+ Y KAG ++ +
Sbjct: 41 FEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDLWVLMIDSYGKAGIVQESV 100
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+ F++++ LG +SY ++ +R G + +M ++ + + ++ G+
Sbjct: 101 KLFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGF 160
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
+ G E A R FE ++ I+PD +IN Y + ++A F M+ +EP+
Sbjct: 161 FLCGKVETANRFFEDMKXREISPDVITYNTMINGYYRVKKIEEAEKYFVEMKGRNIEPTV 220
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEA 382
++ ++++ AL L +++ GF + A
Sbjct: 221 VTYTTLIKGYVSVDRVDDALTLLEEMK--GFGIKPNA 255
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 87/210 (41%), Gaps = 7/210 (3%)
Query: 163 EESFEANIRDYT---KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
E E I+ Y K+I G+ M + N +L+ G + T VM+ + G
Sbjct: 108 ELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLS---EGIEPTRHTFNVMIWGFFLCG 164
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A FE++K D +Y +M+ Y R ++ E EM + + Y
Sbjct: 165 KVETANRFFEDMKXREISPDVITYNTMINGYYRVKKIEEAEKYFVEMKGRNIEPTVVTYT 224
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L++GY + A + E ++ GI P+A + L+ A + +A + M
Sbjct: 225 TLIKGYVSVDRVDDALTLLEEMKGFGIKPNAITYSTLLPGLCNAEKMSEASGILKEMVDK 284
Query: 340 GLEPSDKCVAL-ILSACEKENQLNRALEFL 368
+ P D + L ++S K L+ A + L
Sbjct: 285 YIAPKDNSIFLRLISGQCKAGNLDAAADVL 314
>gi|224084127|ref|XP_002307219.1| predicted protein [Populus trichocarpa]
gi|222856668|gb|EEE94215.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 100/219 (45%), Gaps = 10/219 (4%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+L+ E E N + +I GY K+ A L GF+ D VT+T +V + G
Sbjct: 210 SLMNEIKEPNDVTFNVLICGYCKEDNFVQALVLLEKSFSLGFVPDVVTVTKVVEILCNVG 269
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ A E E ++ G +D ++ +++ + + G + G LL+EM+ + ++ Y
Sbjct: 270 RVTEAVEILERVESKGGVVDVVAHNTLIKGFCKFGKVKLGHGLLKEMERKGCLPNADTYN 329
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK- 338
AL+ G+ +G E A +F ++ GI + LI G+++ + + M +
Sbjct: 330 ALISGFCESGMLESALDMFNDMKTDGINCNFVTFDTLIKGLFSRGRTEDGFKILELMEET 389
Query: 339 -----AGLEPSDKCVALILSACEKENQLNRALEFLIDLE 372
+ P + +L ++N LN ALEFL+ +E
Sbjct: 390 RGVCGGSISPYNS----VLYGLYRKNMLNEALEFLMKME 424
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 52/278 (18%), Positives = 104/278 (37%), Gaps = 39/278 (14%)
Query: 156 VAELALLEESFE----ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
V L LLE+SF ++ TK++ ++ A L ++ +G + D V +
Sbjct: 237 VQALVLLEKSFSLGFVPDVVTVTKVVEILCNVGRVTEAVEILERVESKGGVVDVVAHNTL 296
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ + K G +K+ +E++ G + +Y +++ + +GML+ + +M +
Sbjct: 297 IKGFCKFGKVKLGHGLLKEMERKGCLPNADTYNALISGFCESGMLESALDMFNDMKTDGI 356
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFE-------------------------------A 300
+ L++G G +E ++ E A
Sbjct: 357 NCNFVTFDTLIKGLFSRGRTEDGFKILELMEETRGVCGGSISPYNSVLYGLYRKNMLNEA 416
Query: 301 IQF----AGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACE 356
++F + P A +L I + G Q+A + M G PS ++
Sbjct: 417 LEFLMKMENLFPRAVDRSLRILGFCEEGAIQEAKRVYDQMNNEGGIPSALVYDCLIHGFC 476
Query: 357 KENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
+E + ALE + ++ G+ L + F RLG
Sbjct: 477 QEGCVREALELMNEMVFLGYFPVASTFNALISGFCRLG 514
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 79/188 (42%), Gaps = 5/188 (2%)
Query: 159 LALLEES---FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
L L+EE+ +I Y +++G +K + A L MK V ++ ++ +
Sbjct: 383 LELMEETRGVCGGSISPYNSVLYGLYRKNMLNEALEFL--MKMENLFPRAVDRSLRILGF 440
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
+ G ++ A+ ++++ G Y ++ + + G + L+ EM + +
Sbjct: 441 CEEGAIQEAKRVYDQMNNEGGIPSALVYDCLIHGFCQEGCVREALELMNEMVFLGYFPVA 500
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
+ AL+ G+ G A ++ E + G PD + LI+A QKA +
Sbjct: 501 STFNALISGFCRLGKDGSALKLLEDMVGRGCVPDTGSYSPLIDALCRKKSFQKAASLLLQ 560
Query: 336 MRKAGLEP 343
M + G+ P
Sbjct: 561 MVENGITP 568
>gi|224136366|ref|XP_002326842.1| predicted protein [Populus trichocarpa]
gi|222835157|gb|EEE73592.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 104/236 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ ++ + +I+ + + + A N MK G I + V ++ Y KA +
Sbjct: 210 MIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARD 269
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A +EE+K D ++ +V + R G + + LLR++ S +Y
Sbjct: 270 IGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSISSLYNI 329
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+ G G + A + E + GITP +I AY AG +KAY A++ M K G
Sbjct: 330 CVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFG 389
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVV 396
L PS + ++ K +L A + L ++ +G + K A L + R+G V
Sbjct: 390 LFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDV 445
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 96/217 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+LE+ + + II Y + + A M + G +T + +++ SK
Sbjct: 350 MLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWR 409
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ A + E+ + G P++K ++ ++ Y R G + L EM+ + ++ + + A
Sbjct: 410 LQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSA 469
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+ G S+ G + A VF + G P+ + LI + +G+ Q+A + M + G
Sbjct: 470 FINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMARKG 529
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
L P +I++ KE ++ A + ++ G +
Sbjct: 530 LLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLI 566
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 77/171 (45%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKL 233
+ +I G K ++Q A + L M G ++ T+++ Y + G++ A + E++
Sbjct: 398 SSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEG 457
Query: 234 LGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEG 293
G D ++ + + G++D + +M + + VY +L+RG+ +G +
Sbjct: 458 RGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQE 517
Query: 294 AQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A + + G+ PD ++IN G+ + A F+NM GL P
Sbjct: 518 ALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPD 568
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 82/215 (38%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ E N +T ++ GY + + A + M+ RG D V + + S G
Sbjct: 420 MIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGL 479
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + F ++ G + Y S++ + +G L +L REM + +
Sbjct: 480 VDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNI 539
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G G + A VF + G+ PD LI+ Y A + M G
Sbjct: 540 IINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATG 599
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+P + L +++RA+ L +L G
Sbjct: 600 WDPDITTYNIRLHGLCTGRKMSRAVMMLEELISAG 634
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 71/175 (40%), Gaps = 6/175 (3%)
Query: 155 QVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
++A LL + F NI II+G K+ ++++A + M G I D VT ++
Sbjct: 524 EMARKGLLPDIFTTNI-----IINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLIDG 578
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
Y KA + +E ++ G D +Y + + R ++L E+ + V
Sbjct: 579 YCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGRKMSRAVMMLEELISAGVVPD 638
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
+ Y ++ G + E A V + P+ LL++ + G +K
Sbjct: 639 TVTYNTVMNGVCTD-VLERAMIVTAKLLKMAFVPNVVTANLLLSHFCKQGMPEKT 692
>gi|302809589|ref|XP_002986487.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
gi|300145670|gb|EFJ12344.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
Length = 773
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 84/219 (38%), Gaps = 13/219 (5%)
Query: 137 DWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAM 196
DW +L M H E + ++ Y ++ + ++ A M
Sbjct: 168 DWEGLLNLFAQMRH-------------EGIQPDLITYNTLLSACSSRGLVEQAAMVFKTM 214
Query: 197 KRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGML 256
G + D VT +V ++ + L EE E++ G D Y S++ AY AG +
Sbjct: 215 NESGVVADAVTYKSLVDTFAGSNQLGRVEELLREMEDEGNSPDIAGYNSLIEAYADAGNV 274
Query: 257 DRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALL 316
+ ++M E Y LLR Y G E + +F ++ P L
Sbjct: 275 HGAAGVFKQMQRGGCAPDVETYSTLLRIYGNQGCFEQVRSLFSDMKELSTPPTVATYNSL 334
Query: 317 INAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
I + G Q++ F +M +G++P D + +LS C
Sbjct: 335 IQVFGEGGYFQESINLFHDMVDSGVKPDDATYSALLSVC 373
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 111/297 (37%), Gaps = 39/297 (13%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+E +I Y +I Y + A M+R G D T + ++ +Y G +
Sbjct: 251 DEGNSPDIAGYNSLIEAYADAGNVHGAAGVFKQMQRGGCAPDVETYSTLLRIYGNQGCFE 310
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
F ++K L P +Y S++ + G L +M V Y ALL
Sbjct: 311 QVRSLFSDMKELSTPPTVATYNSLIQVFGEGGYFQESINLFHDMVDSGVKPDDATYSALL 370
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G + A ++ + + TP A LI++Y + A ++ +R+AGL+
Sbjct: 371 SVCGRGGLTREAAKIHQHMLTNESTPSLEASAGLISSYGKMAMYKDALVSYYRIREAGLD 430
Query: 343 PSDKC-----------------------------------VALILSACEKENQLNRALEF 367
P V ++ A K + ALEF
Sbjct: 431 PQVSAYDALIQGYAKGGLYVEAGSTLYAMNKAGFQAPVSSVNSVMEAYSKVGLHDEALEF 490
Query: 368 LIDL-ERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRETYSKIPGSRSIAL 423
+L +++G V + TL + +G++EE + E+ + + SK+PG+R L
Sbjct: 491 FSELQQKEGSEVDERTHETLLGVYCDMGLLEEAK---EEFVIIKETSKVPGARVYCL 544
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 104/269 (38%), Gaps = 59/269 (21%)
Query: 135 RADWLAVLKQLKLM---------EHPLYLQVAELA---LLE---ESFEA--------NIR 171
R+DW L+ K M EH + + + LLE E FE N+
Sbjct: 59 RSDWHRALRLFKYMQRQQWCKPTEHIYTIMIGIMGREGLLEKCSEIFEDMPENDVKWNVY 118
Query: 172 DYTKIIHGYGKKMQIQNA------------------ENTLL------------------A 195
+T +I+ YG+ Q + + NT+L
Sbjct: 119 AFTALINAYGRNGQYEASLHLLARMKKERVEPNLITYNTVLNACSKGGLDWEGLLNLFAQ 178
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M+ G D +T ++ S G ++ A F+ + G D +Y S+V + +
Sbjct: 179 MRHEGIQPDLITYNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVTYKSLVDTFAGSNQ 238
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
L R E LLREM+ + Y +L+ Y+ GN GA VF+ +Q G PD +
Sbjct: 239 LGRVEELLREMEDEGNSPDIAGYNSLIEAYADAGNVHGAAGVFKQMQRGGCAPDVETYST 298
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
L+ Y G ++ + F +M++ P+
Sbjct: 299 LLRIYGNQGCFEQVRSLFSDMKELSTPPT 327
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 7/124 (5%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E + + Y +I GY K A +TL AM + GF ++ ++ YSK G
Sbjct: 426 EAGLDPQVSAYDALIQGYAKGGLYVEAGSTLYAMNKAGFQAPVSSVNSVMEAYSKVGLHD 485
Query: 223 MAEETFEEIKLL-GEPLDKRSYGSMVMAYVRAGMLDRGE---VLLREMDAQEVYVGSEVY 278
A E F E++ G +D+R++ +++ Y G+L+ + V+++E G+ VY
Sbjct: 486 EALEFFSELQQKEGSEVDERTHETLLGVYCDMGLLEEAKEEFVIIKETSKVP---GARVY 542
Query: 279 KALL 282
LL
Sbjct: 543 CLLL 546
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 67/180 (37%), Gaps = 1/180 (0%)
Query: 243 YGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQ 302
Y M+ R G+L++ + +M +V + AL+ Y NG E + + ++
Sbjct: 85 YTIMIGIMGREGLLEKCSEIFEDMPENDVKWNVYAFTALINAYGRNGQYEASLHLLARMK 144
Query: 303 FAGITPDARMCALLINAYQMAGQSQKA-YTAFQNMRKAGLEPSDKCVALILSACEKENQL 361
+ P+ ++NA G + F MR G++P +LSAC +
Sbjct: 145 KERVEPNLITYNTVLNACSKGGLDWEGLLNLFAQMRHEGIQPDLITYNTLLSACSSRGLV 204
Query: 362 NRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRETYSKIPGSRSI 421
+A + G + +L F + VE +LRE I G S+
Sbjct: 205 EQAAMVFKTMNESGVVADAVTYKSLVDTFAGSNQLGRVEELLREMEDEGNSPDIAGYNSL 264
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 113/246 (45%), Gaps = 2/246 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E N+ ++ +I + K+ ++ AE M +R D T + ++ +
Sbjct: 316 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 375
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV-YK 279
L A+ FE + + +Y +++ + +A ++ G L REM +Q VG+ V Y
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM-SQRGLVGNTVTYN 434
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L++G G+ + AQ++F+ + G+ PD ++L++ G+ +KA F+ ++K+
Sbjct: 435 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 494
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEV 399
+EP +++ K ++ + L G T+ + F R G+ EE
Sbjct: 495 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 554
Query: 400 EHVLRE 405
+ + RE
Sbjct: 555 DALFRE 560
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 105/230 (45%), Gaps = 2/230 (0%)
Query: 158 ELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSK 217
EL + ++ F N+ Y +I G+ K +++ M +RG + + VT ++ +
Sbjct: 384 ELMISKDCF-PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 442
Query: 218 AGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
AG+ MA++ F+++ G P D +Y ++ + G L++ V+ + ++
Sbjct: 443 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYT 502
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y ++ G G E +F ++ G+ P+ + +I+ + G ++A F+ M+
Sbjct: 503 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 562
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLA 387
+ G P+ ++ A ++ + E + ++ GF VG ++ ++
Sbjct: 563 EDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGF-VGDASTISMV 611
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 75/170 (44%), Gaps = 1/170 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + +I Y+ ++ G K +++ A +++ D T +M+ KAG
Sbjct: 456 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ + F + L G + Y +M+ + R G+ + + L REM S Y
Sbjct: 516 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNT 575
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAY 330
L+R +G+ + + + ++ G DA +++IN G+ +K+Y
Sbjct: 576 LIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLH-DGRLEKSY 624
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 73/186 (39%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
N Y +I G + A+ M G D +T ++++ K G L+ A
Sbjct: 428 GNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVV 487
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
FE ++ D +Y M+ +AG ++ G L + + V +Y ++ G+
Sbjct: 488 FEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCR 547
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G E A +F ++ G P++ LI A G + + MR G
Sbjct: 548 KGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDAST 607
Query: 348 VALILS 353
++++++
Sbjct: 608 ISMVIN 613
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 56/288 (19%), Positives = 116/288 (40%), Gaps = 22/288 (7%)
Query: 115 PETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLME------------HPLYLQ---VAEL 159
P+ LS LL + R ++ +A++ Q+ +ME H L+L +
Sbjct: 148 PDIVTLSSLLNGYCH--GKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAV 205
Query: 160 ALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
AL++ + ++ Y +++G K+ I A + L M++ D V T ++
Sbjct: 206 ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDAL 265
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
N+ A F E+ G + +Y S++ G LL +M +++
Sbjct: 266 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 325
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
+ AL+ + G A+++++ + I PD + LIN + M + +A F+
Sbjct: 326 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 385
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEAS 383
M P+ ++ K ++ +E ++ + G +VG +
Sbjct: 386 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRG-LVGNTVT 432
>gi|302780493|ref|XP_002972021.1| hypothetical protein SELMODRAFT_412471 [Selaginella moellendorffii]
gi|300160320|gb|EFJ26938.1| hypothetical protein SELMODRAFT_412471 [Selaginella moellendorffii]
Length = 2052
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 4/192 (2%)
Query: 169 NIRDYTKIIHGYGKK----MQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA 224
+I Y +IHG +K +++ A M +G VT TV++ + + A
Sbjct: 1801 DIVTYNTLIHGLCRKGNGRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQA 1860
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
++ + + G D +Y ++ + +AGM+D+ L EM + Y +++ G
Sbjct: 1861 QKVLDLMHENGCAFDLVTYNMLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSIVDG 1920
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
+ G E A ++F ++ GI P+ R + +A AG+ Q A+ MRK GL +
Sbjct: 1921 FCKAGKVEEANKLFAEMKARGIFPNGRTYTSITDACLKAGRMQDAHAYLVEMRKEGLVDA 1980
Query: 345 DKCVALILSACE 356
VALI + C+
Sbjct: 1981 ISYVALISTICK 1992
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 105/260 (40%), Gaps = 7/260 (2%)
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA 224
SF+AN Y+ I+ GY + + + A L MK+ + +++ K G K A
Sbjct: 1692 SFQANAFTYSTIVRGYCEDGETRQALALLEHMKKAEVPANAKLYNIILTHLCKHGKEKEA 1751
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
+ + D +Y ++ A + G L+ + L+ M A+E Y L+ G
Sbjct: 1752 LDLLHSMATTSCAPDIYTYNILINALCKVGRLEDAQGLVEMMQARECPTDIVTYNTLIHG 1811
Query: 285 YSMNGNS----EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
GN E A R+FE + G TP + ++I+A ++A M + G
Sbjct: 1812 LCRKGNGRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENG 1871
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
++++ K +++A++ +++ G + ++ F + G VEE
Sbjct: 1872 CAFDLVTYNMLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSIVDGFCKAGKVEEAN 1931
Query: 401 HVLREYGLRETYSKIPGSRS 420
+ E R + P R+
Sbjct: 1932 KLFAEMKARGIF---PNGRT 1948
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 95/213 (44%), Gaps = 4/213 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN----LKMA 224
+I Y +I+ K ++++A+ + M+ R D VT ++ + GN ++ A
Sbjct: 1766 DIYTYNILINALCKVGRLEDAQGLVEMMQARECPTDIVTYNTLIHGLCRKGNGRFRVERA 1825
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
FEE+ G +Y ++ A +R M ++ + +L M Y L+
Sbjct: 1826 FRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDLVTYNMLINR 1885
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
++ G + A +F + G PD +++ + AG+ ++A F M+ G+ P+
Sbjct: 1886 FAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSIVDGFCKAGKVEEANKLFAEMKARGIFPN 1945
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDGFM 377
+ I AC K ++ A +L+++ ++G +
Sbjct: 1946 GRTYTSITDACLKAGRMQDAHAYLVEMRKEGLV 1978
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 83/178 (46%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
A++ Y +I+G+ K ++++ M +RG + + VT ++ + +AG++ A+E
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
F ++ G D +Y ++ G L++ V+ +M +E+ + Y ++RG
Sbjct: 388 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 447
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
G E A +F ++ G+ PD +++ G + + M++ GL +D
Sbjct: 448 TGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKND 505
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 102/240 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++++ N+ Y+ ++ + K ++ A+ M R D VT + ++
Sbjct: 251 MIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDR 310
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + F+ + G D SY +++ + +A ++ G L REM + + + Y
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 370
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L++G+ G+ + AQ F + F GI+PD +L+ G+ +KA F++M+K
Sbjct: 371 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 430
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
++ ++ K ++ A L G T+ + G++ EVE
Sbjct: 431 MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE 490
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 117/275 (42%), Gaps = 21/275 (7%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRD 172
++P S LL A+V+ K VL+ +L E ++ S + +I
Sbjct: 256 ITPNVITYSALLDAFVKNGK--------VLEAKELFEE----------MVRMSIDPDIVT 297
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I+G +I A M +G + D V+ ++ + KA ++ + F E+
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +Y +++ + +AG +D+ + +MD + Y LL G NG E
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELE 417
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +FE +Q + D +I G+ ++A++ F ++ GL+P ++
Sbjct: 418 KALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 477
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLA 387
S + L+ ++++G M + CTL+
Sbjct: 478 SGLCTKGLLHEVEALYTKMKQEGLM---KNDCTLS 509
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/245 (18%), Positives = 100/245 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L+ +E + +++G+ ++ ++ +A + + M G+ D V ++ K
Sbjct: 146 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKR 205
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + F+EI+ G + +Y ++V + LL +M +++ Y A
Sbjct: 206 VNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSA 265
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL + NG A+ +FE + I PD + LIN + + +A F M G
Sbjct: 266 LLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG 325
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+++ K ++ ++ ++ + G + TL F + G V++ +
Sbjct: 326 CLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQ 385
Query: 401 HVLRE 405
+
Sbjct: 386 EFFSQ 390
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/237 (17%), Positives = 102/237 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+ +I+ + Q+ A + L M + G+ D+VT+ +V + + + A +++
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+G D +Y +++ + + ++ +E++ + + Y AL+ G +
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A R+ + ITP+ + L++A+ G+ +A F+ M + ++P + ++
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLR 409
+ ++++ A + + G + + TL F + VE+ + RE R
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR 359
>gi|297848576|ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 662
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 95/243 (39%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E E + Y +++G M + +AE M+ D VT M+ Y KAG +
Sbjct: 215 ENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDVVTYNTMIKGYCKAGQTQ 274
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A E ++ G DK +Y +M+ A L +EMD + + V + ++
Sbjct: 275 KALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALYQEMDEKGLQVPPHAFSLVI 334
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G G VFE + G P+ + +LI+ Y G + A M G
Sbjct: 335 GGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFN 394
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P +++++ K ++ A+++ +G + +L + G V+E E +
Sbjct: 395 PDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERL 454
Query: 403 LRE 405
E
Sbjct: 455 FEE 457
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 105/225 (46%), Gaps = 3/225 (1%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + + N+ YT +I GY K +++A L M GF D VT +V+V K G
Sbjct: 353 MIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGR 412
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ A + F+ + G ++ Y S++ +AG +D E L EM + S Y A
Sbjct: 413 VEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNA 472
Query: 281 LLRGYSMNGNSEGAQRVFEAI-QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ ++ +G + A +F+ + + G +LI+ ++++A + M
Sbjct: 473 LIDAFTKHGKVDEALALFKRMEEEEGCDQTVYTYTILISGMFKEHRNEEALKLWDMMIDK 532
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASC 384
G+ P+ C+ + + ++ RA + L +L G ++ +A+C
Sbjct: 533 GITPTAACLRALSTGLCLSGKVARACKILDELAPMGVIL--DAAC 575
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 92/230 (40%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y +I GY K Q Q A L M+ +G D++T M+ + +
Sbjct: 256 DVVTYNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALY 315
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+ G + ++ ++ + G L+ G + M + +Y L+ GY+
Sbjct: 316 QEMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKT 375
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G+ E A R+ + G PD ++++N G+ ++A FQ R GL +
Sbjct: 376 GSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFY 435
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
+ ++ K +++ A ++ G L F + G V+E
Sbjct: 436 SSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDE 485
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 102/247 (41%), Gaps = 43/247 (17%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++E F ++ Y+ +++G K +++ A + + G + + + ++ KAG
Sbjct: 388 MIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGR 447
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE-----VYVGS 275
+ AE FEE+ G D Y +++ A+ + G +D L + M+ +E VY
Sbjct: 448 VDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQTVYT-- 505
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDA-----------------RMCALL-- 316
Y L+ G +E A ++++ + GITP A R C +L
Sbjct: 506 --YTILISGMFKEHRNEEALKLWDMMIDKGITPTAACLRALSTGLCLSGKVARACKILDE 563
Query: 317 ---------------INAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQL 361
IN AG+ ++A + + G E + ++++A K +
Sbjct: 564 LAPMGVILDAACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKA 623
Query: 362 NRALEFL 368
+ A++ +
Sbjct: 624 DLAMKLM 630
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 65/153 (42%)
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
EI+ P+ S++ ++ + GM++ + R+M + Y L+ G
Sbjct: 177 EIRKFEFPMTVSPGNSLIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAM 236
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
+ A+RVFE ++ I PD +I Y AGQ+QKA + M GLE
Sbjct: 237 FVDSAERVFEVMESGRIKPDVVTYNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITYM 296
Query: 350 LILSACEKENQLNRALEFLIDLERDGFMVGKEA 382
++ AC ++ + + +++ G V A
Sbjct: 297 TMIQACYADSDFSSCVALYQEMDEKGLQVPPHA 329
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 89/206 (43%), Gaps = 1/206 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E+ + ++ +I G K+ ++ M R+G + TV++ Y+K G+++
Sbjct: 320 EKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVE 379
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A + G D +Y +V + G ++ + + + S Y +L+
Sbjct: 380 DAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLI 439
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM-RKAGL 341
G G + A+R+FE + G T D+ LI+A+ G+ +A F+ M + G
Sbjct: 440 DGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGC 499
Query: 342 EPSDKCVALILSACEKENQLNRALEF 367
+ + +++S KE++ AL+
Sbjct: 500 DQTVYTYTILISGMFKEHRNEEALKL 525
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 82/219 (37%), Gaps = 10/219 (4%)
Query: 196 MKRRGFICDQV-------TLTVMVVMYSKAGNLKMAEE---TFEEIKLLGEPLDKRSYGS 245
+ R FIC ++ T++ + G L M EE + ++K G +Y
Sbjct: 168 VDRIRFICSEIRKFEFPMTVSPGNSLIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNF 227
Query: 246 MVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAG 305
++ V A +D E + M++ + Y +++GY G ++ A ++ G
Sbjct: 228 LMNGLVSAMFVDSAERVFEVMESGRIKPDVVTYNTMIKGYCKAGQTQKALEKLRVMETKG 287
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
+ D +I A +Q M + GL+ +L++ KE +LN
Sbjct: 288 LEADKITYMTMIQACYADSDFSSCVALYQEMDEKGLQVPPHAFSLVIGGLCKEGKLNEGY 347
Query: 366 EFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
++ R G L + + G VE+ +L
Sbjct: 348 AVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLH 386
>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 105/225 (46%), Gaps = 9/225 (4%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E N+ Y +I G ++ ++ AE + MKR G + ++ ++ Y GNL
Sbjct: 297 ERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLD 356
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRA----GMLDRGEVLLREMDAQEVYVGSEVY 278
A F ++K G+ +Y ++ + A G+ D ++REM+A+ + Y
Sbjct: 357 KASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTD----MVREMEARGLSPSKVTY 412
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
L+ + N E A +++ +++ AG+ D + +LI+ + G ++A F+++ +
Sbjct: 413 TILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDE 472
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEAS 383
L+P+D ++ KE RAL L ++ +G MV AS
Sbjct: 473 MHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENG-MVPNVAS 516
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 77/182 (42%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E N+ YT +I G K I+ + M + +Q T TV++ + K G K
Sbjct: 192 EMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKK 251
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
E +E++KL G + +Y SM+ G L+ L EM + V Y L+
Sbjct: 252 DGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLI 311
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G A+R+ ++ G++P+ LI+ Y G KA + F M+ +G
Sbjct: 312 GGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQS 371
Query: 343 PS 344
PS
Sbjct: 372 PS 373
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 96/231 (41%), Gaps = 7/231 (3%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+SF ++ + II+ + + + A M RG + T ++++ K+ +
Sbjct: 89 DSFPTHVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEK 148
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F E K LD S+G M+ G LD+G +L +M+ + VY L+
Sbjct: 149 AWRVFNETKG-NVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLID 207
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G NG+ E +++F + + + +LIN + G + ++ M+ G+ P
Sbjct: 208 GCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVP 267
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
+ ++ C + +LN A E ++ G +C + + +G
Sbjct: 268 NVYTYNSMICRCCNDGKLNNAFELFDEMRERG------VACNVVTYNTLIG 312
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 74/173 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I ++ NA M+ RG C+ VT ++ + + AE
Sbjct: 268 NVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLM 327
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+K G + SY +++ Y G LD+ L +M + Y L+ G+S
Sbjct: 328 CRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEA 387
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
NS G + ++ G++P +L++A + +KA+ + +M KAGL
Sbjct: 388 KNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGL 440
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 77/175 (44%), Gaps = 6/175 (3%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G+ + + + M+ RG +VT T+++ ++ N++ A + + ++
Sbjct: 377 YNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSME 436
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D YG ++ G + L + +D + +Y ++ GY G+S
Sbjct: 437 KAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSY 496
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK---AYTAFQNMRKAGLEPS 344
A R+ + + G+ P+ A + Q+ + +K A ++M + GL+PS
Sbjct: 497 RALRLLKEMGENGMVPNV---ASYNSTIQILCKDEKWTEAEVLLKDMIELGLKPS 548
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 36/202 (17%), Positives = 84/202 (41%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D + +M+ + G L E +++ +G + Y +++ + G ++RG+ L
Sbjct: 163 DVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLF 222
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
+M +V Y L+ G+ G + ++E ++ GI P+ +I
Sbjct: 223 YKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCND 282
Query: 324 GQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEAS 383
G+ A+ F MR+ G+ + ++ +E ++ A + ++RDG +
Sbjct: 283 GKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISY 342
Query: 384 CTLAAWFKRLGVVEEVEHVLRE 405
TL + +G +++ + +
Sbjct: 343 NTLIDGYCSIGNLDKASSLFNQ 364
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 83/178 (46%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
A++ Y +I+G+ K ++++ M +RG + + VT ++ + +AG++ A+E
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
F ++ G D +Y ++ G L++ V+ +M +E+ + Y ++RG
Sbjct: 388 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 447
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
G E A +F ++ G+ PD +++ G + + M++ GL +D
Sbjct: 448 TGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKND 505
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 102/240 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++++ N+ Y+ ++ + K ++ A+ M R D VT + +V
Sbjct: 251 MIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDR 310
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + F+ + G D SY +++ + +A ++ G L REM + + + Y
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 370
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L++G+ G+ + AQ F + F GI+PD +L+ G+ +KA F++M+K
Sbjct: 371 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 430
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
++ ++ K ++ A L G T+ + G++ EVE
Sbjct: 431 MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE 490
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 117/275 (42%), Gaps = 21/275 (7%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRD 172
++P S LL A+V+ K VL+ +L E ++ S + +I
Sbjct: 256 ITPNVITYSALLDAFVKNGK--------VLEAKELFEE----------MVRMSIDPDIVT 297
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +++G +I A M +G + D V+ ++ + KA ++ + F E+
Sbjct: 298 YSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +Y +++ + +AG +D+ + +MD + Y LL G NG E
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELE 417
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +FE +Q + D +I G+ ++A++ F ++ GL+P ++
Sbjct: 418 KALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 477
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLA 387
S + L+ ++++G M + CTL+
Sbjct: 478 SGLCTKGLLHEVEALYTKMKQEGLM---KNDCTLS 509
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 44/245 (17%), Positives = 100/245 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L+ +E + +++G+ ++ ++ +A + + M G+ D V ++ K
Sbjct: 146 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKR 205
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + F+EI+ G + +Y ++V + LL +M +++ Y A
Sbjct: 206 VNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSA 265
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL + NG A+ +FE + I PD + L+N + + +A F M G
Sbjct: 266 LLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKG 325
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+++ K ++ ++ ++ + G + TL F + G V++ +
Sbjct: 326 CLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQ 385
Query: 401 HVLRE 405
+
Sbjct: 386 EFFSQ 390
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/237 (17%), Positives = 102/237 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+ +I+ + Q+ A + L M + G+ D+VT+ +V + + + A +++
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+G D +Y +++ + + ++ +E++ + + Y AL+ G +
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A R+ + ITP+ + L++A+ G+ +A F+ M + ++P + ++
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLV 302
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLR 409
+ ++++ A + + G + + TL F + VE+ + RE R
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR 359
>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
Length = 759
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 89/206 (43%), Gaps = 3/206 (1%)
Query: 173 YTKIIHGY--GKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
Y +I Y G +M + A +A K G +T + M+ Y+K G A F+E
Sbjct: 262 YNTLIATYCRGGQMHLGAALMETMA-KSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQE 320
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
++ D Y +MV + R G D + R M+ Y ALL Y G
Sbjct: 321 MRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGK 380
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
A + E ++ G +P+ + LI+AY G + A FQ+++KAGL+P +
Sbjct: 381 FREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYST 440
Query: 351 ILSACEKENQLNRALEFLIDLERDGF 376
++ C K + AL L ++ +G
Sbjct: 441 LVDGCCKNGSPDEALALLEEMADNGI 466
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 88/214 (41%), Gaps = 6/214 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFIC--DQVTLTVMVVMYSKAGNLKM 223
F N+ Y+ +I YG+ ++ A AMK +C + V ++ SK G+
Sbjct: 151 FGNNVFVYSSLICAYGRSGKLAKAVEIFEAMK---VVCKPNLVVYNAVIDACSKGGDYPT 207
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F E+ G D+ ++ +++ A RA + + + EM+ + + Y L+
Sbjct: 208 ALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIA 267
Query: 284 GYSMNGNSEGAQRVFEAI-QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
Y G + E + + +GI P + +I+ Y G + +A FQ MR +E
Sbjct: 268 TYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVE 327
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
P C ++ + + A +E GF
Sbjct: 328 PDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGF 361
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 75/179 (41%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
E ++ Y+ +I GY K A M+ + D + MV ++++ GN A
Sbjct: 291 IEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAH 350
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
++ G D +Y +++ +Y + G LL EM + Y AL+ Y
Sbjct: 351 SIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAY 410
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
+G A +F+ ++ AG+ PD + + L++ G +A + M G+ P+
Sbjct: 411 CKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPN 469
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 71/166 (42%), Gaps = 4/166 (2%)
Query: 159 LALLEESFEANIRD----YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
+AL +E N+ Y ++ + + A + AM+ GF D VT ++
Sbjct: 315 IALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDS 374
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
Y K G + A EE+K G + +Y +++ AY + G L +++ +
Sbjct: 375 YGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPD 434
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAY 320
+Y L+ G NG+ + A + E + GI P+ L++AY
Sbjct: 435 VVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAY 480
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 94/199 (47%), Gaps = 4/199 (2%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+ +I GY K + A MK + D +T+T + ++ G+L++A E I
Sbjct: 343 WNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYIS 402
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ D S++ Y + G +D + + ++V V + A++ GY ++G
Sbjct: 403 MSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVV----WSAMMVGYGLHGQGR 458
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
+ +F A++ AG++P+ L+ A + +G ++ + F MR G+EP + A ++
Sbjct: 459 ESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMRDYGIEPRHQHYACVV 518
Query: 353 SACEKENQLNRALEFLIDL 371
+ L+RA F++++
Sbjct: 519 DLLGRAGHLDRAYNFVMNM 537
>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like, partial [Cucumis sativus]
Length = 602
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 98/207 (47%), Gaps = 5/207 (2%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++F NI I G+ + + + A+ LL M+ RG + V+ ++++ +Y K N
Sbjct: 397 DAFTCNI-----IASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAE 451
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F+ ++ G+ +Y + + Y + G ++ L+ EM + + + Y +L+
Sbjct: 452 ARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLID 511
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G +GN + A +F + G+ + ++I+ G++ +A+ + M K G+ P
Sbjct: 512 GERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVP 571
Query: 344 SDKCVALILSACEKENQLNRALEFLID 370
D + ++++ K L LE ++D
Sbjct: 572 DDGIYSSLIASLHKVGPLVSGLENVVD 598
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 103/242 (42%)
Query: 134 RRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTL 193
R W AV+ L + + L+ + F+ ++ Y +++GY + + L
Sbjct: 187 RVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEIL 246
Query: 194 LAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRA 253
M++ + T T+++ YS++ ++ AE+ F+E+ G D Y S++ +
Sbjct: 247 SLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKF 306
Query: 254 GMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
G + R VL EM + + + Y AL+ G G + A+ + +Q G+ + +
Sbjct: 307 GNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIF 366
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
L++ Y G +A M++ G E +I S + N+ A L+ +E
Sbjct: 367 NTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEE 426
Query: 374 DG 375
G
Sbjct: 427 RG 428
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 95/217 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L++ E ++ YT II+ K ++ A M R + + T ++ KAG
Sbjct: 284 MLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGE 343
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+K AE +++ G +++ + +++ Y + GM+D L M + + +
Sbjct: 344 MKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNI 403
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+ G+ + E A+R+ ++ G+ P+ ++LI+ Y +A F+ M K G
Sbjct: 404 IASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKG 463
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
PS + K+ ++ A + + +++ G M
Sbjct: 464 KAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLM 500
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 88/216 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+ E N Y +I+G K +++ AE + M+ +G ++V ++ Y K G
Sbjct: 319 MTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGM 378
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A ++ G +D + + + R+ + + LL M+ + V +
Sbjct: 379 IDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSI 438
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ Y N A+R+F+ ++ G P I Y G+ ++AY M++ G
Sbjct: 439 LIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERG 498
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
L P ++ ++RALE ++ + G
Sbjct: 499 LMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGL 534
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/243 (18%), Positives = 104/243 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ E + +T ++ G KK ++ A+ + + +GF +T ++ Y + +
Sbjct: 179 MVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKD 238
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ E ++ + +Y ++ Y R+ ++ E L EM + + +Y +
Sbjct: 239 VGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTS 298
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ GN + A +F+ + + P+A LIN AG+ + A +M+ G
Sbjct: 299 IINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKG 358
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
++ + ++ K+ ++ AL +++ GF + +A+ F R EE +
Sbjct: 359 VDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAK 418
Query: 401 HVL 403
+L
Sbjct: 419 RLL 421
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 89/203 (43%), Gaps = 3/203 (1%)
Query: 209 TVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
T +V K G + A+ +E+ G +Y +++ Y+ + +L M+
Sbjct: 192 TAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEK 251
Query: 269 QEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
V Y L+ YS + E A+++F+ + GI PD + +IN G ++
Sbjct: 252 NVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKR 311
Query: 329 AYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAA 388
A+ F M + L P+ +++ K ++ A + D++ G V + TL
Sbjct: 312 AFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMD 371
Query: 389 WFKRLGVVEE---VEHVLREYGL 408
+ + G+++E +++++++ G
Sbjct: 372 GYCKKGMIDEALRLQNIMQQKGF 394
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/169 (19%), Positives = 72/169 (42%)
Query: 197 KRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGML 256
+++GF D+ + ++ ++GN+++ E ++ G + S+ ++V + G +
Sbjct: 145 RKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEV 204
Query: 257 DRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALL 316
R + L+ E+ + Y LL GY + G + ++ + + +L
Sbjct: 205 VRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTML 264
Query: 317 INAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
I Y + + ++A F M K G+EP I++ K + RA
Sbjct: 265 IEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAF 313
>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 104/243 (42%), Gaps = 3/243 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ YT +I + I A+ M G +Q T+M+ + K G K E +
Sbjct: 141 NVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELY 200
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+++KL+G + +Y S++ Y R G L + E+ + V + Y L+ G
Sbjct: 201 QKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRK 260
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G A+ + E ++ A I P R +L++ GQ KA + + ++ GL P+
Sbjct: 261 GQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTY 320
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE---EVEHVLRE 405
+++S K + E + ++E G K L F R +E E+ H+++
Sbjct: 321 NILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKR 380
Query: 406 YGL 408
GL
Sbjct: 381 IGL 383
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 94/208 (45%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
N Y +I G +K Q+ AE L MKR T +++ G L A
Sbjct: 245 CNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSY 304
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
E++KL+G +Y ++ + + G L+REM+ + + Y L+ +
Sbjct: 305 LEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVR 364
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
+ + E A +F ++ G+ PD +LI+ + G +A +++M + L+P+D
Sbjct: 365 SDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVI 424
Query: 348 VALILSACEKENQLNRALEFLIDLERDG 375
+++ KE +AL+FL ++ ++G
Sbjct: 425 YNTMINGYCKECNSYKALKFLEEMVKNG 452
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 80/188 (42%), Gaps = 7/188 (3%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G+ K + M+ RG +VT T+++ + ++ +++ A E F +K
Sbjct: 320 YNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMK 379
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+G D+ +YG ++ G + L + M + +Y ++ GY NS
Sbjct: 380 RIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSY 439
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + E + G+TP+ I G+S +A + M +AGL+P +
Sbjct: 440 KALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLKEMTEAGLKPPE------- 492
Query: 353 SACEKENQ 360
S C K Q
Sbjct: 493 SLCSKVGQ 500
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 4/189 (2%)
Query: 160 ALLEESFEANI----RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
LLE A+I R + ++ G Q+ A + L +K G VT +++ +
Sbjct: 268 GLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGF 327
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
SK GN + E E++ G K +Y ++ +VR+ +++ + M +
Sbjct: 328 SKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQ 387
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
Y L+ G + GN A ++++++ + P+ + +IN Y S KA +
Sbjct: 388 HTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEE 447
Query: 336 MRKAGLEPS 344
M K G+ P+
Sbjct: 448 MVKNGVTPN 456
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 83/191 (43%), Gaps = 3/191 (1%)
Query: 214 MYSKAGNLKMAEETFEEIKLLGEP-LDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY 272
+ +K+GNL F E LG D S+G + A+ G + +G LL +M+ V
Sbjct: 82 LLAKSGNLDRTWGFFTE--YLGRTQFDVYSFGITIKAFCENGNVSKGFELLAQMETMGVS 139
Query: 273 VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTA 332
+Y L+ NG+ + A+ +F + G+ + + ++IN + G + +
Sbjct: 140 PNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFEL 199
Query: 333 FQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKR 392
+Q M+ G+ P+ +++ ++ +L+ A + ++ + G L R
Sbjct: 200 YQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCR 259
Query: 393 LGVVEEVEHVL 403
G V + E +L
Sbjct: 260 KGQVSKAEGLL 270
>gi|410110089|gb|AFV61124.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
macropoda]
Length = 427
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 100/212 (47%), Gaps = 4/212 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y + YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 220 KNIEQNVVTYNSMXMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDR 279
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ + +M++AY RAG++ + LL E+ + + + +L
Sbjct: 280 AAMLFQKLRSSGIEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDTAIHILA 338
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + F MR G P
Sbjct: 339 G---AGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFP 395
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDG 375
+A++L+A K + ++A + ++++ G
Sbjct: 396 DSDVIAIVLNAYGKLQEFDKANDVYMEMQEVG 427
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 101/237 (42%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 120 NTXSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 179
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y ++ Y
Sbjct: 180 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMXMIYGKT 239
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G+E
Sbjct: 240 LEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQILF 299
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE +V R+
Sbjct: 300 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAG----AGRIEEATYVFRQ 352
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 103/248 (41%), Gaps = 6/248 (2%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L + F ++ Y +I+ +GK + A + + MK G + + + + ++ MY +
Sbjct: 77 LKKSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTXSYSTLLTMYVENKK 136
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A F E++ + LD + M+ Y + GM + L M + Y
Sbjct: 137 FLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNT 196
Query: 281 LLRGYSMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
LLR Y G++E A +F +Q I + + Y + +KA Q M+
Sbjct: 197 LLRVY---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMXMIYGKTLEHEKANNLIQEMQ 253
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
G+EP+ + I+S K +L+RA L G + + T+ ++R G+V
Sbjct: 254 SRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQILFQTMIVAYERAGLVA 313
Query: 398 EVEHVLRE 405
+ +L E
Sbjct: 314 HAKRLLHE 321
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 75/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ A + L M++ D V + ++ + K + A F +K
Sbjct: 19 YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 78
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +M+ + +A + L+ EM A V + Y LL Y N
Sbjct: 79 KSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTXSYSTLLTMYVENKKFL 138
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF ++ D C ++I+ Y G +++A F MRK G+EP+
Sbjct: 139 EALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 190
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 33/183 (18%), Positives = 81/183 (44%), Gaps = 2/183 (1%)
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
F+E++ D+ +Y +++ + + G+ D L++M+ V +Y L+
Sbjct: 4 FDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRK 63
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
+ A +F ++ +G TPD +IN + A ++A + M+ AG+ P+
Sbjct: 64 LCDYSKAISIFSRLKKSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTXS 123
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYG 407
+ +L+ + + AL ++ ++ + + +LG+ +E + + +G
Sbjct: 124 YSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF--WG 181
Query: 408 LRE 410
+R+
Sbjct: 182 MRK 184
>gi|357127090|ref|XP_003565218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Brachypodium distachyon]
Length = 886
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 103/246 (41%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
++ E N Y +IH K+ + +A L M+ +G ++ K +L
Sbjct: 365 DKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLD 424
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
MA E+ +G + SY ++ R G L L R+M + V + + AL+
Sbjct: 425 MAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALI 484
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G+ + A R+F + + + P+ +I Y + G +KA+ + M GL
Sbjct: 485 NGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLT 544
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P + ++S + ++A EF+ DLE + ++ K + L F R G + E HV
Sbjct: 545 PDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHV 604
Query: 403 LREYGL 408
E +
Sbjct: 605 WNEMAM 610
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 84/195 (43%), Gaps = 1/195 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+T I++ K+ + + MK +G D V T M+ MYSK GN+ A ++E+
Sbjct: 620 FTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMI 679
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +Y ++V ++ L E+L +EM A S + L ++ GN E
Sbjct: 680 ADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEGNLE 739
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ ++ A+ G + LI + GQ Q+A + G P + ++
Sbjct: 740 TAKDLYFAM-LQGFLANIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISYSTVI 798
Query: 353 SACEKENQLNRALEF 367
K+ +N A+E
Sbjct: 799 HELCKKGDINEAIEL 813
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 87/204 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+G K +++ A + +M RG D+VT +V + + L MA E ++
Sbjct: 235 YNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYGFCRTEELDMALEMTGDMA 294
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
LG + + M+ + G ++ L ++ + Y ALL NG
Sbjct: 295 RLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAYNALLNNMCKNGMFS 354
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A R+ + G+ P+ A+LI++ G A MR+ G+ + ++
Sbjct: 355 EADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLI 414
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
+ C K++ L+ A+ FL ++ G
Sbjct: 415 NCCCKKDDLDMAMGFLSEMVEIGL 438
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/215 (18%), Positives = 89/215 (41%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E+ N +T +I+G+ K ++ A M ++VT ++ Y G+++
Sbjct: 470 EKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIR 529
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A + ++++ G D +Y S++ + + + +++ + ALL
Sbjct: 530 KAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALL 589
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G+ G A V+ + G D +++ A S+K+ F+ M++ G+
Sbjct: 590 HGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVR 649
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
P + +++ KE + +AL ++ DG +
Sbjct: 650 PDNVFHTCMINMYSKEGNMVQALNCWDEMIADGHL 684
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/176 (18%), Positives = 73/176 (41%), Gaps = 1/176 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N YT +++ K + +AE M F+ + T + ++ GNL+ A++ +
Sbjct: 686 NTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEGNLETAKDLY 745
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ L G + S +++ + + G + L+ + Y ++
Sbjct: 746 FAM-LQGFLANIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISYSTVIHELCKK 804
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
G+ A ++ + + G+ PD +LI + G+S K + +M K G++P+
Sbjct: 805 GDINEAIELWNEMLYKGVKPDIVAYNILIRWCNIHGESDKCLGIYIDMVKKGVQPN 860
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 90/226 (39%), Gaps = 1/226 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G A+ + ++ + ++ +LT ++ + + G L A + E+
Sbjct: 550 YRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMA 609
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ G LD S+ +V A ++ ++ VL REM + V + + ++ YS GN
Sbjct: 610 MWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMV 669
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A ++ + G P+ L+N + A + M + P+ L
Sbjct: 670 QALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFL 729
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
E L A + + + GF+ + TL F ++G ++E
Sbjct: 730 DYFATEGNLETAKDLYFAMLQ-GFLANIVSVNTLIKGFCKVGQIQE 774
>gi|255660926|gb|ACU25632.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 484
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 107/240 (44%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
FE N + KII G+ ++ +A LL M ++G D+ +M+ Y K G ++ +
Sbjct: 41 FEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVLMIDSYGKEGIVQESV 100
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+ F++++ LG +SY ++ +R G + +M ++ + + ++ G+
Sbjct: 101 KLFQKMEELGVERTIKSYDALFKVIMRRGRFMMAKRYFNKMLSEGIEPTRHTFNVMIWGF 160
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
++G E A R FE ++ I+PD +IN Y + ++A F M+ +EP+
Sbjct: 161 FLSGKVETANRFFEDMKSREISPDVITYNTMINGYCRVKKMEEAEKYFVEMKGKNIEPTV 220
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ +Q++ AL + +++ G TL + E +L+E
Sbjct: 221 VTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKE 280
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 87/202 (43%), Gaps = 8/202 (3%)
Query: 163 EESFEANIRDYT---KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
E E I+ Y K+I G+ M + N +L+ G + T VM+ + +G
Sbjct: 108 ELGVERTIKSYDALFKVIMRRGRFMMAKRYFNKMLS---EGIEPTRHTFNVMIWGFFLSG 164
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A FE++K D +Y +M+ Y R ++ E EM + + Y
Sbjct: 165 KVETANRFFEDMKSREISPDVITYNTMINGYCRVKKMEEAEKYFVEMKGKNIEPTVVTYT 224
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L++GY + A R+ E ++ GI P+A + L+ A + +A + + M
Sbjct: 225 TLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDK 284
Query: 340 GLEPSDKCV--ALILSACEKEN 359
+ P+D + LI S C+ N
Sbjct: 285 YIAPTDNSIFMRLISSHCKVGN 306
>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
Length = 899
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 3/213 (1%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E+ + YT +I G KK + NA M++ G D+ V+ K+G
Sbjct: 432 EDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGR-- 489
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
AEE + + G L K +Y S+V + +AG D VL+ +M + S Y LL
Sbjct: 490 -AEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLL 548
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
+ A + + + +G+ + ++I+ G+ A + F M +G +
Sbjct: 549 QALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHK 608
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDG 375
PS + +S+ K Q+ A + ++ERDG
Sbjct: 609 PSATTYTVFISSYCKIGQIEEAEHLIGEMERDG 641
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 110/266 (41%), Gaps = 16/266 (6%)
Query: 140 AVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR 199
A L+ +LMEH E N Y+ +I+G + ++ A + M+
Sbjct: 387 AALEVFRLMEH-------------EGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQED 433
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G +T T ++ K A FE ++ G D+++Y + A ++G R
Sbjct: 434 GITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSG---RA 490
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
E + + V + Y +L+ G+S GN++ A + E + G D+ ++L+ A
Sbjct: 491 EEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQA 550
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
+ +A + M +G++ + +I+S KE + + A ++ G
Sbjct: 551 LCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPS 610
Query: 380 KEASCTLAAWFKRLGVVEEVEHVLRE 405
+ + ++G +EE EH++ E
Sbjct: 611 ATTYTVFISSYCKIGQIEEAEHLIGE 636
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 85/172 (49%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
++L + + +++ Y +I+ KK + + A+ T+ M G + V T ++ Y K G
Sbjct: 324 SMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVG 383
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ A E F ++ G + +Y S++ ++ L + L+ +M + G Y
Sbjct: 384 KVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYT 443
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
L++G + A R+FE ++ G+TPD + +L +A +G++++AY+
Sbjct: 444 TLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYS 495
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 83/196 (42%), Gaps = 3/196 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y + H K + + A + L+ R+G + +VT T +V +SKAGN A E++
Sbjct: 477 YNVLTHALCKSGRAEEAYSFLV---RKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMV 533
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y ++ A + L+ +L +M V Y ++ G +
Sbjct: 534 NEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHD 593
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ +F + +G P A + I++Y GQ ++A M + G+ P + +
Sbjct: 594 HAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFI 653
Query: 353 SACEKENQLNRALEFL 368
+ C ++RA L
Sbjct: 654 NGCGHMGYMDRAFSTL 669
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 68/172 (39%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT ++ G+ K A + M G D T +V++ K L A +++
Sbjct: 509 YTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMT 568
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
L G + +Y ++ ++ G D + + EM + + Y + Y G E
Sbjct: 569 LSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIE 628
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A+ + ++ G+ PD + IN G +A++ + M A EP+
Sbjct: 629 EAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPN 680
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 105/260 (40%), Gaps = 5/260 (1%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQN-AENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
AL+E + N D+T I YG + + AE L RGF +T T ++ Y KA
Sbjct: 254 ALMERN-GCNPDDWTYNILIYGLCGEKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKA 312
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
+ A + LD ++YG ++ ++ + + EM A + +Y
Sbjct: 313 ERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIY 372
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
+++ GY G A VF ++ G P+A + LI + KA M++
Sbjct: 373 TSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQE 432
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
G+ P ++ K+++ + A +E++G ++A L + G EE
Sbjct: 433 DGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEE 492
Query: 399 VEHVLREYGL---RETYSKI 415
L G+ + TY+ +
Sbjct: 493 AYSFLVRKGVVLTKVTYTSL 512
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 47/267 (17%), Positives = 98/267 (36%), Gaps = 51/267 (19%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ E +A+ Y+ ++ K+ ++ A + L M G C+ V T+++ K G
Sbjct: 532 MVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGK 591
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A+ F E+ G +Y + +Y + G ++ E L+ EM+ V Y
Sbjct: 592 HDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNV 651
Query: 281 LLRGYSMNGNSEGA----QRVFEA--------------------------IQFAG----- 305
+ G G + A +R+ +A + +G
Sbjct: 652 FINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWI 711
Query: 306 ----------------ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
+ P A + +I + A + ++A F +MR + P+++
Sbjct: 712 ELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYT 771
Query: 350 LILSACEKENQLNRALEFLIDLERDGF 376
+++ C +A+ F+ D+ GF
Sbjct: 772 MLIKCCCDIKLFGKAVSFVTDMIEFGF 798
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 60/154 (38%), Gaps = 6/154 (3%)
Query: 218 AGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
G+L+ A + L+G ++ SY ++ + VLL M +
Sbjct: 138 GGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHT 197
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y L++G G GA+RV E + G+ P +I+ Y +G+ + A M
Sbjct: 198 YTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALME 257
Query: 338 KAGLEPSDKCV-ALILSAC-----EKENQLNRAL 365
+ G P D LI C E E LN A+
Sbjct: 258 RNGCNPDDWTYNILIYGLCGEKPDEAEELLNDAI 291
>gi|255660906|gb|ACU25622.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 484
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 113/243 (46%), Gaps = 6/243 (2%)
Query: 141 VLKQLKLMEHPL-YLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR 199
VL K EH L + + E + L FE N + KII G+ ++ +A LL + ++
Sbjct: 18 VLHSAKTSEHALQFFRWVERSNL---FEHNRETHLKIIEILGRASKLNHARCILLDIPKK 74
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G D+ +M+ Y K G ++ + + F++++ LG +SY ++ +R G
Sbjct: 75 GLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMA 134
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+ +M ++ + + ++ G+ ++G E A R FE ++ I+PD +IN
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTIING 194
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
Y + ++A F M+ +EP+ ++ +Q++ AL + +++ GF +
Sbjct: 195 YYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK--GFGIK 252
Query: 380 KEA 382
A
Sbjct: 253 PNA 255
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 86/202 (42%), Gaps = 8/202 (3%)
Query: 163 EESFEANIRDYT---KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
E E I+ Y K+I G+ M + N +L+ G + T VM+ + +G
Sbjct: 108 ELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLS---EGIEPTRHTFNVMIWGFFLSG 164
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A FE++K D +Y +++ Y R ++ E EM + + Y
Sbjct: 165 KVETANRFFEDMKSREISPDVVTYNTIINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYT 224
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L++GY + A R+ E ++ GI P+A + L+ A + +A + + M
Sbjct: 225 TLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMTEARSILKEMMDK 284
Query: 340 GLEPSDKCV--ALILSACEKEN 359
L P+D + LI S C N
Sbjct: 285 YLAPTDNSIFMRLISSQCNSGN 306
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 71/162 (43%), Gaps = 1/162 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y II+GY + +++ AE + MK R VT T ++ Y + A
Sbjct: 184 DVVTYNTIINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLV 243
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM-DAQEVYVGSEVYKALLRGYSM 287
EE+K G + +Y +++ A + +L+EM D + ++ L+
Sbjct: 244 EEMKGFGIKPNAITYSTLLPGLCNAEKMTEARSILKEMMDKYLAPTDNSIFMRLISSQCN 303
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
+GN + A V +A+ + +A +LI + AGQ +A
Sbjct: 304 SGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQYDQA 345
>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Cucumis sativus]
Length = 606
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 98/207 (47%), Gaps = 5/207 (2%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++F NI I G+ + + + A+ LL M+ RG + V+ ++++ +Y K N
Sbjct: 401 DAFTCNI-----IASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAE 455
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F+ ++ G+ +Y + + Y + G ++ L+ EM + + + Y +L+
Sbjct: 456 ARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLID 515
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G +GN + A +F + G+ + ++I+ G++ +A+ + M K G+ P
Sbjct: 516 GERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVP 575
Query: 344 SDKCVALILSACEKENQLNRALEFLID 370
D + ++++ K L LE ++D
Sbjct: 576 DDGIYSSLIASLHKVGPLVSGLENVVD 602
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 103/242 (42%)
Query: 134 RRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTL 193
R W AV+ L + + L+ + F+ ++ Y +++GY + + L
Sbjct: 191 RVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEIL 250
Query: 194 LAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRA 253
M++ + T T+++ YS++ ++ AE+ F+E+ G D Y S++ +
Sbjct: 251 SLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKF 310
Query: 254 GMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
G + R VL EM + + + Y AL+ G G + A+ + +Q G+ + +
Sbjct: 311 GNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIF 370
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
L++ Y G +A M++ G E +I S + N+ A L+ +E
Sbjct: 371 NTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEE 430
Query: 374 DG 375
G
Sbjct: 431 RG 432
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 95/217 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L++ E ++ YT II+ K ++ A M R + + T ++ KAG
Sbjct: 288 MLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGE 347
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+K AE +++ G +++ + +++ Y + GM+D L M + + +
Sbjct: 348 MKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNI 407
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+ G+ + E A+R+ ++ G+ P+ ++LI+ Y +A F+ M K G
Sbjct: 408 IASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKG 467
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
PS + K+ ++ A + + +++ G M
Sbjct: 468 KAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLM 504
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 88/216 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+ E N Y +I+G K +++ AE + M+ +G ++V ++ Y K G
Sbjct: 323 MTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGM 382
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A ++ G +D + + + R+ + + LL M+ + V +
Sbjct: 383 IDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSI 442
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ Y N A+R+F+ ++ G P I Y G+ ++AY M++ G
Sbjct: 443 LIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERG 502
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
L P ++ ++RALE ++ + G
Sbjct: 503 LMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGL 538
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/243 (18%), Positives = 104/243 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ E + +T ++ G KK ++ A+ + + +GF +T ++ Y + +
Sbjct: 183 MVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKD 242
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ E ++ + +Y ++ Y R+ ++ E L EM + + +Y +
Sbjct: 243 VGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTS 302
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ GN + A +F+ + + P+A LIN AG+ + A +M+ G
Sbjct: 303 IINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKG 362
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
++ + ++ K+ ++ AL +++ GF + +A+ F R EE +
Sbjct: 363 VDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAK 422
Query: 401 HVL 403
+L
Sbjct: 423 RLL 425
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 91/204 (44%), Gaps = 5/204 (2%)
Query: 209 TVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
T +V K G + A+ +E+ G +Y +++ Y+ + +L M+
Sbjct: 196 TAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEK 255
Query: 269 QEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
V Y L+ YS + E A+++F+ + GI PD + +IN G ++
Sbjct: 256 NVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKR 315
Query: 329 AYTAFQNMRKAGLEPSDKCV-ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLA 387
A+ F M + L P+ ALI AC K ++ A + D++ G V + TL
Sbjct: 316 AFVLFDEMTERRLVPNAYTYGALINGAC-KAGEMKAAEMMVNDMQSKGVDVNRVIFNTLM 374
Query: 388 AWFKRLGVVEE---VEHVLREYGL 408
+ + G+++E +++++++ G
Sbjct: 375 DGYCKKGMIDEALRLQNIMQQKGF 398
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/169 (19%), Positives = 72/169 (42%)
Query: 197 KRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGML 256
+++GF D+ + ++ ++GN+++ E ++ G + S+ ++V + G +
Sbjct: 149 RKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEV 208
Query: 257 DRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALL 316
R + L+ E+ + Y LL GY + G + ++ + + +L
Sbjct: 209 VRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTML 268
Query: 317 INAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
I Y + + ++A F M K G+EP I++ K + RA
Sbjct: 269 IEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAF 317
>gi|302761054|ref|XP_002963949.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
gi|300167678|gb|EFJ34282.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
Length = 1365
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 89/190 (46%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E+ F + Y ++H + + +I+ E M+ D++T M+ MY KAG +
Sbjct: 259 EQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGKAGMHR 318
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
AEE + ++K G D ++ ++ +AG ++ + +M +V + + A++
Sbjct: 319 KAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAMI 378
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
Y+ A+ + + AG+ PD +++++ + AG +K ++ M +GL+
Sbjct: 379 CAYAKADMFTDAEHTYSCMLRAGVRPDLLAYSVMLDVFFKAGMPEKCIILYKAMVGSGLK 438
Query: 343 PSDKCVALIL 352
P A+++
Sbjct: 439 PELSVYAIMV 448
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 95/250 (38%), Gaps = 35/250 (14%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E N R + I H + + ++ A + MK GF ++ +YS+
Sbjct: 742 LPEMGISPNSRTFVVIFHAFSRNGNLEEARSMYRQMKEAGFSPSIQVFKALLALYSRETV 801
Query: 221 LKMAEETFEEIKLLGEPL-----------------------------------DKRSYGS 245
AEE ++IK G L D ++ +
Sbjct: 802 EIDAEELVKDIKKAGLELDIDIYNHMISLYSKLGSYRNAALVFKGMQEIGCSPDATTFNT 861
Query: 246 MVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAG 305
++M Y R M+ + LLREM Y L+ Y E A+ VF++I G
Sbjct: 862 LIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIAETG 921
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
PDA ++IN Y+ AG+ +K + M+ G EPS + +++ + K +A
Sbjct: 922 CKPDATAYNVMINVYRKAGEHRKIEEIIEQMKVDGFEPSLTTIHMLMDSYGKGGATGKAE 981
Query: 366 EFLIDLERDG 375
E L L G
Sbjct: 982 EVLETLPEIG 991
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 111/271 (40%), Gaps = 14/271 (5%)
Query: 167 EANIRDYTKI-IHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
+ + D+ K+ + Y + A L M G D L V+ Y + G +A
Sbjct: 572 QVQVSDFLKVLVASYDRAGMQDEALARFLDMTTEGLEMDAEVLQTAVMCYCRKGFAFVAH 631
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
E + + D + +++ +Y + + E++ R++ + Y ALL Y
Sbjct: 632 ELLIDCLHAFDVKDSAMHVAIIASYGKLKLWQNAEIVFRDLQQHGFAGNTSAYSALLSAY 691
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
+ GN E A R + + AG+ P+A ++ A+ AG++++ FQ + + G+ P+
Sbjct: 692 AETGNFERATRALDNMVAAGLQPNATCANYVLEAFGRAGKAKEISEFFQRLPEMGISPNS 751
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGV---VEEVEHV 402
+ +I A + L A ++ GF + L A + R V EE+
Sbjct: 752 RTFVVIFHAFSRNGNLEEARSMYRQMKEAGFSPSIQVFKALLALYSRETVEIDAEELVKD 811
Query: 403 LREYGLR----------ETYSKIPGSRSIAL 423
+++ GL YSK+ R+ AL
Sbjct: 812 IKKAGLELDIDIYNHMISLYSKLGSYRNAAL 842
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 99/244 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L + F N Y+ ++ Y + + A L M G + ++ + +AG
Sbjct: 672 LQQHGFAGNTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNATCANYVLEAFGRAGK 731
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
K E F+ + +G + R++ + A+ R G L+ + R+M +V+KA
Sbjct: 732 AKEISEFFQRLPEMGISPNSRTFVVIFHAFSRNGNLEEARSMYRQMKEAGFSPSIQVFKA 791
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL YS A+ + + I+ AG+ D + +I+ Y G + A F+ M++ G
Sbjct: 792 LLALYSRETVEIDAEELVKDIKKAGLELDIDIYNHMISLYSKLGSYRNAALVFKGMQEIG 851
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
P ++ + + A L ++ + G TL + + RL E+ E
Sbjct: 852 CSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAE 911
Query: 401 HVLR 404
V +
Sbjct: 912 LVFK 915
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 92/209 (44%), Gaps = 4/209 (1%)
Query: 160 ALLEESFEANIR----DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
+LL++ + A +R Y +I ++ +A M+R+G D T M+ +Y
Sbjct: 182 SLLQDVYAAGLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVY 241
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
+AG ++ A F ++ G D +Y S++ A+ R G ++ E + M
Sbjct: 242 GRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDE 301
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
Y ++ Y G A+ ++ ++ G PD+ +LI+ AG +A F++
Sbjct: 302 ITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFED 361
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRA 364
M K+ + P+ + + ++ A K + A
Sbjct: 362 MLKSQVRPTLQAFSAMICAYAKADMFTDA 390
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 81/204 (39%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+ +I Y + +Q A+ L M + G + T T ++ Y + + AE F+ I
Sbjct: 859 FNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIA 918
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y M+ Y +AG + E ++ +M L+ Y G +
Sbjct: 919 ETGCKPDATAYNVMINVYRKAGEHRKIEEIIEQMKVDGFEPSLTTIHMLMDSYGKGGATG 978
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ V E + G++PDA +IN++ A + M A + P+ + +
Sbjct: 979 KAEEVLETLPEIGMSPDAIHYTSIINSHLNNKDYLSAVIWLRKMTDACVRPTHVTITCFV 1038
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
A + + AL L L GF
Sbjct: 1039 GAASVCERSSHALMLLKALSEAGF 1062
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 83/203 (40%)
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G D +T ++ S L A FEE++ G D +Y +M+ Y RAG ++
Sbjct: 191 GLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAA 250
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+ R M Q + Y ++L ++ +G E +R+ ++ A + D +I+
Sbjct: 251 SSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHM 310
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
Y AG +KA + M++ G P +++ K +N A D+ +
Sbjct: 311 YGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPT 370
Query: 380 KEASCTLAAWFKRLGVVEEVEHV 402
+A + + + + + EH
Sbjct: 371 LQAFSAMICAYAKADMFTDAEHT 393
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 3/142 (2%)
Query: 266 MDAQEVYVGS--EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
D E +G+ +VY +L+ Y+ +G+ Q++ +Q G PD ++I A
Sbjct: 114 FDRAESSIGNCVQVYNSLMSVYARHGDWNSVQQLLCRMQDRGCRPDLVTFNIVIKARTRG 173
Query: 324 G-QSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEA 382
G Q A + Q++ AGL P ++SAC N+L+ A+ +++R G
Sbjct: 174 GMQEGLASSLLQDVYAAGLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWT 233
Query: 383 SCTLAAWFKRLGVVEEVEHVLR 404
+ + + R G VE + R
Sbjct: 234 YNAMISVYGRAGRVEAASSIFR 255
>gi|302786806|ref|XP_002975174.1| hypothetical protein SELMODRAFT_10825 [Selaginella moellendorffii]
gi|300157333|gb|EFJ23959.1| hypothetical protein SELMODRAFT_10825 [Selaginella moellendorffii]
Length = 555
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 106/229 (46%), Gaps = 14/229 (6%)
Query: 134 RRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTL 193
R D+ A+L+ + ME AE+ + N+ + +I G+ ++ A+
Sbjct: 146 RVGDYQAILRLFRDMEQ------AEI-------KPNVVLFNTLIGTLGRAGKVTLAKGMF 192
Query: 194 LAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRA 253
M G ++TL++++ MY+K G L A + ++ IK LD Y +++ + V +
Sbjct: 193 DEMASYGLEPSEITLSILIDMYTKVGALDKALDVYDTIKQKKWKLDVLVYNTLLKSCVES 252
Query: 254 GMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
G + R E L+ EM+ ++ + Y L+ Y+ G + +F+ ++ + P A
Sbjct: 253 GNIQRAESLIAEMEREKQWPDHMTYGILMNVYATKGMVAEVRAMFDKLKNLAVFPKAAFY 312
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLN 362
+LI A + AG + F M G +++ +++S C +Q++
Sbjct: 313 TMLIKASKQAGDFDRIPGIFDEMIANGCSVNERMSGMLVS-CASSSQIS 360
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 81/190 (42%)
Query: 185 QIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYG 244
Q ++A ++ G D VT + M+ +Y KAG A + ++ ++ D S+G
Sbjct: 79 QAEDAIAWFHRLRETGVSFDGVTYSAMIDLYGKAGRTAEAMDLYQTMRKNNWKPDLVSFG 138
Query: 245 SMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFA 304
+ Y R G L R+M+ E+ ++ L+ G A+ +F+ +
Sbjct: 139 VIANVYSRVGDYQAILRLFRDMEQAEIKPNVVLFNTLIGTLGRAGKVTLAKGMFDEMASY 198
Query: 305 GITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
G+ P ++LI+ Y G KA + +++ + +L +C + + RA
Sbjct: 199 GLEPSEITLSILIDMYTKVGALDKALDVYDTIKQKKWKLDVLVYNTLLKSCVESGNIQRA 258
Query: 365 LEFLIDLERD 374
+ ++ER+
Sbjct: 259 ESLIAEMERE 268
>gi|297737369|emb|CBI26570.3| unnamed protein product [Vitis vinifera]
Length = 1042
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 91/200 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +++ + ++ + + M + GF D++T ++ MY K G +A + + ++K
Sbjct: 342 YNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMK 401
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
L G D +Y ++ + +A M+ ++ EM V + AL+ GY+ G
Sbjct: 402 LSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALICGYAKAGKRV 461
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ F+ + +GI PD +++++ +S KA +Q M +P ++L
Sbjct: 462 EAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVML 521
Query: 353 SACEKENQLNRALEFLIDLE 372
KEN+ + + D+E
Sbjct: 522 RVLGKENREEDVHKVVKDME 541
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 89/201 (44%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
+ ++ Y +I YG+ + A ++ +GF+ D VT ++ +++ GN+ +E
Sbjct: 301 QPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKE 360
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
E++ +G D+ +Y +++ Y + G D L +M + Y L+
Sbjct: 361 ICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLG 420
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
+ A V + A + P R + LI Y AG+ +A F M ++G++P
Sbjct: 421 KANMIKEAAEVMSEMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHL 480
Query: 347 CVALILSACEKENQLNRALEF 367
+++L + N+ +A++
Sbjct: 481 AYSVMLDILLRFNESGKAMKL 501
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 79/176 (44%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
++R G D +T ++ S+ NL+ A + + ++ D +Y +M+ Y R GM
Sbjct: 260 VRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGM 319
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
L ++++++ + Y +LL ++ GN + + + E + G D
Sbjct: 320 SREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNT 379
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDL 371
+I+ Y GQ A+ + +M+ +G P +++ + K N + A E + ++
Sbjct: 380 IIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEM 435
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 90/224 (40%), Gaps = 2/224 (0%)
Query: 154 LQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVV 213
L V A E + ++ Y ++ Y + + + L M+ RG D V+ ++
Sbjct: 181 LAVEIFARAEAASGNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLIN 240
Query: 214 MYSKAGNL--KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
K+G + +A E E++ G D +Y +++ A R L+ + +M A
Sbjct: 241 ARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRC 300
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
Y A++ Y G S A R+F+ ++ G PDA L+ A+ G K
Sbjct: 301 QPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKE 360
Query: 332 AFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
++M K G + I+ K Q + A + D++ G
Sbjct: 361 ICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSG 404
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 66/165 (40%), Gaps = 3/165 (1%)
Query: 215 YSKAGNLKM---AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
Y KA + + EE FE + LD+ Y M+ + +G + E LL M V
Sbjct: 581 YGKARDFGLFCGTEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGV 640
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
L+ YS +G E A++V + ++ G+ + +I+AY G A
Sbjct: 641 EPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVAIQ 700
Query: 332 AFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
M+K GLEP + + A + A+ L L GF
Sbjct: 701 KLMEMKKDGLEPDHRIWTCFVRAASLSQHTSEAIVLLKALRDTGF 745
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 78/179 (43%), Gaps = 10/179 (5%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D+ +M+ M+ +GN AE+ +K G + ++++Y +G + E +L
Sbjct: 608 DRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVL 667
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
+ + + + + Y +++ Y NG+ A + ++ G+ PD R+ + A ++
Sbjct: 668 DNLKVEGLPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRIWTCFVRAASLS 727
Query: 324 GQSQKAYTAFQNMRKAGL--------EPSDKCVALILSACEKENQL--NRALEFLIDLE 372
+ +A + +R G E SD V+ + + EK L N A F+ LE
Sbjct: 728 QHTSEAIVLLKALRDTGFDLPIRLLTEKSDSLVSEVDNCLEKLGPLEDNAAFNFVNALE 786
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 59/124 (47%)
Query: 189 AENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVM 248
AE L MK G T+ +++V YS +G + AE+ + +K+ G PL Y S++
Sbjct: 628 AEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVID 687
Query: 249 AYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITP 308
AY++ G + L EM + ++ +R S++ ++ A + +A++ G
Sbjct: 688 AYLKNGDHNVAIQKLMEMKKDGLEPDHRIWTCFVRAASLSQHTSEAIVLLKALRDTGFDL 747
Query: 309 DARM 312
R+
Sbjct: 748 PIRL 751
>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
Length = 550
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 105/225 (46%), Gaps = 9/225 (4%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E N+ Y +I G ++ ++ AE + MKR G + ++ ++ Y GNL
Sbjct: 284 ERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLD 343
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRA----GMLDRGEVLLREMDAQEVYVGSEVY 278
A F ++K G+ +Y ++ + A G+ D ++REM+A+ + Y
Sbjct: 344 KASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTD----MVREMEARGLSPSKVTY 399
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
L+ + N E A +++ +++ AG+ D + +LI+ + G ++A F+++ +
Sbjct: 400 TILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDE 459
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEAS 383
L+P+D ++ KE RAL L ++ +G MV AS
Sbjct: 460 MHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENG-MVPNVAS 503
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 77/182 (42%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E N+ YT +I G K I+ + M + +Q T TV++ + K G K
Sbjct: 179 EMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKK 238
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
E +E++KL G + +Y SM+ G L+ L EM + V Y L+
Sbjct: 239 DGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLI 298
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G A+R+ ++ G++P+ LI+ Y G KA + F M+ +G
Sbjct: 299 GGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQS 358
Query: 343 PS 344
PS
Sbjct: 359 PS 360
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 96/231 (41%), Gaps = 7/231 (3%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+SF ++ + II+ + + + A M RG + T ++++ K+ +
Sbjct: 76 DSFPTHVLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEK 135
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F E K LD S+G M+ G LD+G +L +M+ + VY L+
Sbjct: 136 AWRVFNETKG-NVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLID 194
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G NG+ E +++F + + + +LIN + G + ++ M+ G+ P
Sbjct: 195 GCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVP 254
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
+ ++ C + +LN A E ++ G +C + + +G
Sbjct: 255 NVYTYNSMICRCCNDGKLNNAFELFDEMRERG------VACNVVTYNTLIG 299
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 74/173 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I ++ NA M+ RG C+ VT ++ + + AE
Sbjct: 255 NVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLM 314
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+K G + SY +++ Y G LD+ L +M + Y L+ G+S
Sbjct: 315 CRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEA 374
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
NS G + ++ G++P +L++A + +KA+ + +M KAGL
Sbjct: 375 KNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGL 427
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/172 (19%), Positives = 73/172 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G+ + + + M+ RG +VT T+++ ++ N++ A + + ++
Sbjct: 364 YNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSME 423
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D YG ++ G + L + +D + +Y ++ GY G+S
Sbjct: 424 KAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSY 483
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A R+ + + G+ P+ I + +A ++M + GL+PS
Sbjct: 484 RALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIELGLKPS 535
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 36/202 (17%), Positives = 84/202 (41%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D + +M+ + G L E +++ +G + Y +++ + G ++RG+ L
Sbjct: 150 DVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLF 209
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
+M +V Y L+ G+ G + ++E ++ GI P+ +I
Sbjct: 210 YKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCND 269
Query: 324 GQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEAS 383
G+ A+ F MR+ G+ + ++ +E ++ A + ++RDG +
Sbjct: 270 GKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISY 329
Query: 384 CTLAAWFKRLGVVEEVEHVLRE 405
TL + +G +++ + +
Sbjct: 330 NTLIDGYCSIGNLDKASSLFNQ 351
>gi|356552149|ref|XP_003544432.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Glycine max]
Length = 481
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 84/168 (50%), Gaps = 4/168 (2%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I + +I YGK + + + M++R F VT ++ ++ KAG ++ ++ F
Sbjct: 300 DITTFNTMIKSYGKAGMYEKMKTVMDFMEKRFFTPTIVTYNTVIEVFGKAGEIEKMDQHF 359
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++K LG + +Y S+V AY + G +D+ + ++R ++ +V + + + ++ Y
Sbjct: 360 LKMKHLGVKPNSITYCSLVSAYSKVGCIDKVDSIMRHVENSDVVLDTPFFNCIISAYGQA 419
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
GN + +F A++ PD A +I +Y G ++ A QN+
Sbjct: 420 GNLKKMGELFLAMRERKCEPDNITFACMIQSYNTQGMTE----AVQNL 463
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/277 (19%), Positives = 115/277 (41%), Gaps = 4/277 (1%)
Query: 132 KPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAEN 191
+PR + +L L P + +L E + + YT ++ YG+ + A +
Sbjct: 121 QPRCRTYAKLLMMLGKCRQPEEASLLFEIMLSEGLKPTVDVYTALVSAYGQSGLLDQAFS 180
Query: 192 TLLAMKRRGFIC--DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMA 249
T+ MK C D T ++++ +K + E E+ LG + +Y S++
Sbjct: 181 TVEDMKSV-VDCEPDVYTYSILIRCCAKFRRFDLIEHVLAEMSYLGIKCNCVTYNSIIDG 239
Query: 250 YVRAGMLDRGEVLLREM-DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITP 308
Y +A M ++ + L +M + + + + Y G + ++ ++ Q GI P
Sbjct: 240 YGKASMFEQMDDALNDMIENGNSHPDVFTLNSFVGAYGNAGQIDKMEKWYDEFQLMGIKP 299
Query: 309 DARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFL 368
D +I +Y AG +K T M K P+ ++ K ++ + +
Sbjct: 300 DITTFNTMIKSYGKAGMYEKMKTVMDFMEKRFFTPTIVTYNTVIEVFGKAGEIEKMDQHF 359
Query: 369 IDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ ++ G C+L + + ++G +++V+ ++R
Sbjct: 360 LKMKHLGVKPNSITYCSLVSAYSKVGCIDKVDSIMRH 396
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 113/264 (42%), Gaps = 19/264 (7%)
Query: 107 VKQIICVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESF 166
+K ++ P+ S L+ +F RR D L+EH L AE++ L
Sbjct: 185 MKSVVDCEPDVYTYSILIRCCAKF---RRFD---------LIEHVL----AEMSYL--GI 226
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFIC-DQVTLTVMVVMYSKAGNLKMAE 225
+ N Y II GYGK + ++ L M G D TL V Y AG + E
Sbjct: 227 KCNCVTYNSIIDGYGKASMFEQMDDALNDMIENGNSHPDVFTLNSFVGAYGNAGQIDKME 286
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+ ++E +L+G D ++ +M+ +Y +AGM ++ + ++ M+ + Y ++ +
Sbjct: 287 KWYDEFQLMGIKPDITTFNTMIKSYGKAGMYEKMKTVMDFMEKRFFTPTIVTYNTVIEVF 346
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
G E + F ++ G+ P++ L++AY G K + +++ + +
Sbjct: 347 GKAGEIEKMDQHFLKMKHLGVKPNSITYCSLVSAYSKVGCIDKVDSIMRHVENSDVVLDT 406
Query: 346 KCVALILSACEKENQLNRALEFLI 369
I+SA + L + E +
Sbjct: 407 PFFNCIISAYGQAGNLKKMGELFL 430
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 57/132 (43%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F I Y +I +GK +I+ + L MK G + +T +V YSK G + +
Sbjct: 332 FTPTIVTYNTVIEVFGKAGEIEKMDQHFLKMKHLGVKPNSITYCSLVSAYSKVGCIDKVD 391
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
++ LD + ++ AY +AG L + L M ++ + + +++ Y
Sbjct: 392 SIMRHVENSDVVLDTPFFNCIISAYGQAGNLKKMGELFLAMRERKCEPDNITFACMIQSY 451
Query: 286 SMNGNSEGAQRV 297
+ G +E Q +
Sbjct: 452 NTQGMTEAVQNL 463
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E ++ Y +I+ + K +I A L MK+RG + VT + ++ + KAG L A +
Sbjct: 318 EPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANK 377
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
F ++ +G ++ +Y S++ A + G L+ L EM V + Y ALL G
Sbjct: 378 FFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLC 437
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
+G A+ +F A+ AG T + ++ L + Y A +KA + M K L+P
Sbjct: 438 EDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLL 497
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ ++N++ ++ + ++ G TL + ++G E ++L+E
Sbjct: 498 LYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQE 556
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 97/216 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + N YT +I K + A M++ G + VT T ++ + G
Sbjct: 382 MIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGR 441
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ AEE F + G L+++ Y S+ Y++A M+++ +L EM+ + + +Y
Sbjct: 442 MREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGT 501
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+ G E + V + G+T ++ + LI+AY G++ +A Q M+ G
Sbjct: 502 KIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLG 561
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
++ + +++ K + +A+ + + R+G
Sbjct: 562 IKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGL 597
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%)
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
SK+ +A F+++ + G +Y ++ R G L+ L EM A+ +
Sbjct: 227 SKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDI 286
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
Y +L+ GY G GA VFE ++ AG PD LIN + + +A+
Sbjct: 287 VTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHG 346
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
M++ GL+P+ + ++ A K L A +F +D+ R G
Sbjct: 347 MKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGL 387
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 88/205 (42%), Gaps = 7/205 (3%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
NI YT ++ G + +++ AE A+ + G+ +Q T + Y KA ++ A +
Sbjct: 425 NIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDIL 484
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
EE+ D YG+ + R ++ ++REM + S +Y L+ Y
Sbjct: 485 EEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKV 544
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC- 347
G + A + + +Q GI +LI+ G Q+A F +M + GL+P+
Sbjct: 545 GKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIY 604
Query: 348 VALILSAC------EKENQLNRALE 366
ALI C E +N N L+
Sbjct: 605 TALIDGLCKNDCLEEAKNLFNEMLD 629
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 99/235 (42%), Gaps = 11/235 (4%)
Query: 152 LYLQVAELALLEESFEA-----------NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRG 200
L+ + +L +LEE+ + +R +++H K + A + M G
Sbjct: 187 LFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVAG 246
Query: 201 FICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGE 260
T +++ ++ G+L+ A FEE+K G D +Y S++ Y + GML
Sbjct: 247 LSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAV 306
Query: 261 VLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAY 320
+ EM Y +L+ + A ++ G+ P+ + LI+A+
Sbjct: 307 SVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAF 366
Query: 321 QMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
AG +A F +M + GL+P++ ++ A K LN A + ++++ G
Sbjct: 367 CKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAG 421
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 95/246 (38%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
ALL+ + N + YT + HGY K ++ A + L M ++ D + + +
Sbjct: 451 ALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQN 510
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ + E+ G + Y +++ AY + G LL+EM + + Y
Sbjct: 511 EIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYG 570
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ G G + A R F+ + G+ P+ + LI+ ++A F M
Sbjct: 571 VLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDK 630
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEV 399
G+ P ++ K AL + G + A +L F R G V+
Sbjct: 631 GISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLA 690
Query: 400 EHVLRE 405
+ +L E
Sbjct: 691 KSLLDE 696
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 98/242 (40%), Gaps = 4/242 (1%)
Query: 161 LLEESFEANIRD----YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS 216
+LEE + N++ Y I G ++ +I+++ + M G + T ++ Y
Sbjct: 483 ILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYF 542
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
K G A +E++ LG + +YG ++ + G++ + M +
Sbjct: 543 KVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIM 602
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
+Y AL+ G N E A+ +F + GI+PD + LI+ G +A + M
Sbjct: 603 IYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRM 662
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVV 396
+ G+E ++ + Q+ A L ++ R G + + L + LG +
Sbjct: 663 VEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDI 722
Query: 397 EE 398
E
Sbjct: 723 NE 724
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 99/237 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y +I ++ ++ A + MK +G D VT ++ Y K G L A F
Sbjct: 250 SVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVF 309
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
EE+K G D +Y S++ + + + + L M + + Y L+ +
Sbjct: 310 EEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKA 369
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G A + F + G+ P+ LI+A G +A+ M++AG+ +
Sbjct: 370 GMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTY 429
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+L ++ ++ A E L + G+ + ++ +L + + ++E+ +L E
Sbjct: 430 TALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEE 486
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 85/195 (43%), Gaps = 10/195 (5%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G K +Q A M R G + + T ++ K L+ A+ F E+
Sbjct: 569 YGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEML 628
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV----YKALLRGYSMN 288
G DK Y S++ ++ G + GE L + + V +G E+ Y +L+ G+S
Sbjct: 629 DKGISPDKLVYTSLIDGNMKHG--NPGEAL--SLRNRMVEIGMELDLCAYTSLIWGFSRY 684
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS--DK 346
G + A+ + + + GI PD +C L+ Y G +A +M + GL D
Sbjct: 685 GQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGLISGTIDI 744
Query: 347 CVALILSACEKENQL 361
V L+A K ++L
Sbjct: 745 TVPSCLTAVTKLHKL 759
>gi|334186712|ref|NP_001190774.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|223635614|sp|P0C8Q3.1|PP326_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g19890
gi|332658842|gb|AEE84242.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 701
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 114/264 (43%), Gaps = 11/264 (4%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ F+ N+ ++T +I G KK I+ A L M R G+ + T T ++ K G
Sbjct: 278 MIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGW 337
Query: 221 LKMAEETFEEIKLLGEPLDK---RSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
+ A F +KL+ K +Y SM+ Y + L+R E+L M Q ++
Sbjct: 338 TEKAFRLF--LKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNT 395
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y L+ G+ G+ A + + G P+ I++ ++ +AY
Sbjct: 396 YTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAF 455
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
GLE +++ K+N +N+AL F + + GF + L A F R ++
Sbjct: 456 SCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMK 515
Query: 398 EVEHVLR---EYGL---RETYSKI 415
E E + + GL +ETY+ +
Sbjct: 516 ESERLFQLVVSLGLIPTKETYTSM 539
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 78/201 (38%), Gaps = 1/201 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+E F NI Y I KK + A L G D VT T+++ K ++
Sbjct: 421 DEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDIN 480
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A F + G D R ++ A+ R + E L + + + + E Y +++
Sbjct: 481 QALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMI 540
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
Y G+ + A + F ++ G PD+ LI+ +A ++ M GL
Sbjct: 541 SCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLS 600
Query: 343 PSDKC-VALILSACEKENQLN 362
P + V L C++ + N
Sbjct: 601 PPEVTRVTLAYEYCKRNDSAN 621
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 4/152 (2%)
Query: 161 LLEESF----EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS 216
LL ++F EA+ YT +I K+ I A M + GF D +++ +
Sbjct: 450 LLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFC 509
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
+ +K +E F+ + LG K +Y SM+ Y + G +D M S
Sbjct: 510 RQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSF 569
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITP 308
Y +L+ G + A +++EA+ G++P
Sbjct: 570 TYGSLISGLCKKSMVDEACKLYEAMIDRGLSP 601
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 75/178 (42%), Gaps = 20/178 (11%)
Query: 219 GNLKMAEE-------TFEEIKLLGEP----LDKRSYG----SMVMAYV-----RAGMLDR 258
GNL+ A E F EI L E +D ++ G S+ M V G+++
Sbjct: 141 GNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEY 200
Query: 259 GEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLIN 318
E + EM + V S YK ++ G +G + A R + G PD C L++
Sbjct: 201 AENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILT 260
Query: 319 AYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
A G +A F+ M G +P+ ++ K+ + +A E L ++ R+G+
Sbjct: 261 ALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGW 318
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 36/202 (17%), Positives = 74/202 (36%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E+ N+ YT +I+G+ K A + M GF+ + T + K
Sbjct: 386 EQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAP 445
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A E + G D +Y ++ + +++ M+ + L+
Sbjct: 446 EAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILI 505
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
+ + ++R+F+ + G+ P +I+ Y G A F NM++ G
Sbjct: 506 AAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCV 565
Query: 343 PSDKCVALILSACEKENQLNRA 364
P ++S K++ ++ A
Sbjct: 566 PDSFTYGSLISGLCKKSMVDEA 587
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 76/180 (42%), Gaps = 1/180 (0%)
Query: 186 IQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGS 245
I+ AEN M RG + D + +MV+ + G ++ A+ + G D +
Sbjct: 198 IEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTL 257
Query: 246 MVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAG 305
++ A G+++R R+M + +L+ G G+ + A + E + G
Sbjct: 258 ILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNG 317
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNM-RKAGLEPSDKCVALILSACEKENQLNRA 364
P+ LI+ G ++KA+ F + R +P+ ++ KE++LNRA
Sbjct: 318 WKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRA 377
>gi|168052832|ref|XP_001778843.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669712|gb|EDQ56293.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 953
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 104/246 (42%), Gaps = 7/246 (2%)
Query: 154 LQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVV 213
+QV L L SF IR++ G+ I A AM R G VT ++
Sbjct: 488 MQVRNLELSSFSFNPFIREF-------GRWTMIDEAFEMKAAMLRLGVQPTVVTYNSLIS 540
Query: 214 MYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYV 273
K G+L+ A F E+K LG + Y ++ + G DR ++R MDA V
Sbjct: 541 ACVKIGDLERACSLFPEMKELGVEANTHCYNPLIQGFAMQGRFDRALAVMRSMDAAGVKP 600
Query: 274 GSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAF 333
Y+ L+ S++ + + A ++F +Q I PD + ++I Y G +
Sbjct: 601 DVNTYRLLIFACSLSKDQDKADQLFAEMQEREIRPDESIYTVMIIVYSKCGNVDRGIEMI 660
Query: 334 QNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRL 393
+++ K+G + + IL +L AL +R+ + A TL A ++
Sbjct: 661 RSLEKSGETAGIEAKSAILHGLAVTGRLEEALALYAVFKRERLLPHSYAVGTLLAALGKV 720
Query: 394 GVVEEV 399
G ++++
Sbjct: 721 GDLDKM 726
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 82/218 (37%), Gaps = 47/218 (21%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y +I A+ M+ R D+ TVM+++YSK GN
Sbjct: 601 DVNTYRLLIFACSLSKDQDKADQLFAEMQEREIRPDESIYTVMIIVYSKCGN-------- 652
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+DRG ++R ++ G E A+L G ++
Sbjct: 653 ---------------------------VDRGIEMIRSLEKSGETAGIEAKSAILHGLAVT 685
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP----- 343
G E A ++ + + P + L+ A G K + F++ R G P
Sbjct: 686 GRLEEALALYAVFKRERLLPHSYAVGTLLAALGKVGDLDKMFELFEDARGDGKWPFMNLR 745
Query: 344 ------SDKCVALILSACEKENQLNRALEFLIDLERDG 375
+ +C+ +L AC + NQL RA+ FL ++ +G
Sbjct: 746 QRAEHLNIRCINSVL-ACIRHNQLGRAISFLRKVKEEG 782
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 87/198 (43%), Gaps = 3/198 (1%)
Query: 181 GKKMQIQNAENTLLAMKRRGFICDQVT--LTVMVVMYSKAGNLKMAEETFEEIKLLGEPL 238
G+ Q A +K +G Q+T L + +S+AG L A F E++++ +
Sbjct: 400 GRHFQRDAALQAFSLLKTKGTSDQQMTFYLNAYIQGFSQAGKLADAINAFRELEIVSQVK 459
Query: 239 DKRSYGSMVMAYV-RAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRV 297
+ ++++ + + G + +G L EM + + + S + +R + + A +
Sbjct: 460 GGQHLFNILIDFCCKQGKISQGLDFLDEMQVRNLELSSFSFNPFIREFGRWTMIDEAFEM 519
Query: 298 FEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEK 357
A+ G+ P LI+A G ++A + F M++ G+E + C ++
Sbjct: 520 KAAMLRLGVQPTVVTYNSLISACVKIGDLERACSLFPEMKELGVEANTHCYNPLIQGFAM 579
Query: 358 ENQLNRALEFLIDLERDG 375
+ + +RAL + ++ G
Sbjct: 580 QGRFDRALAVMRSMDAAG 597
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 57/290 (19%), Positives = 110/290 (37%), Gaps = 55/290 (18%)
Query: 177 IHGYGKKMQIQNAENTLLAMKRRGFICDQVT-----LTVMVVMYSKAGNLKMAEETFEEI 231
I G+ + ++ +A N ++ I QV +++ K G + + +E+
Sbjct: 433 IQGFSQAGKLADAINAFRELE----IVSQVKGGQHLFNILIDFCCKQGKISQGLDFLDEM 488
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE----VYKALLRGYSM 287
++ L S+ + + R M+D EM A + +G + Y +L+
Sbjct: 489 QVRNLELSSFSFNPFIREFGRWTMIDEA----FEMKAAMLRLGVQPTVVTYNSLISACVK 544
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G+ E A +F ++ G+ + LI + M G+ +A ++M AG++P
Sbjct: 545 IGDLERACSLFPEMKELGVEANTHCYNPLIQGFAMQGRFDRALAVMRSMDAAGVKPDVNT 604
Query: 348 VALILSAC------EKENQL-----------------------------NRALEFLIDLE 372
L++ AC +K +QL +R +E + LE
Sbjct: 605 YRLLIFACSLSKDQDKADQLFAEMQEREIRPDESIYTVMIIVYSKCGNVDRGIEMIRSLE 664
Query: 373 RDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRETYSKIPGSRSIA 422
+ G G EA +A L V +E L Y + + +P S ++
Sbjct: 665 KSGETAGIEAK---SAILHGLAVTGRLEEALALYAVFKRERLLPHSYAVG 711
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 84/227 (37%), Gaps = 39/227 (17%)
Query: 162 LEESFE-ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
LE+S E A I + I+HG +++ A KR + + ++ K G+
Sbjct: 663 LEKSGETAGIEAKSAILHGLAVTGRLEEALALYAVFKRERLLPHSYAVGTLLAALGKVGD 722
Query: 221 LKMAEETFEEIKLLG-----------EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQ 269
L E FE+ + G E L+ R S V+A +R L R LR++ +
Sbjct: 723 LDKMFELFEDARGDGKWPFMNLRQRAEHLNIRCINS-VLACIRHNQLGRAISFLRKVKEE 781
Query: 270 EVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
+ ++ + S G E R D L+INA
Sbjct: 782 GIADEGVLFDKIFLHISTGGQDENEMRWL----------DVNDGFLVINA---------- 821
Query: 330 YTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
MR+ GL PS + +L C N +A L ++ER+G
Sbjct: 822 ------MRELGLRPSRMSLEALLDGCAALNDSQQAHRVLQEMEREGL 862
>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 588
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 90/205 (43%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ +E ++ Y +I+GY K ++++ A M G D T V++ AG +
Sbjct: 336 KGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDD 395
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A+E F IK P D + + G + L E+++ + + E + L+
Sbjct: 396 AKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLID 455
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A +FE + GI PDA + +I+ + GQ KA FQ M + G P
Sbjct: 456 GLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSP 515
Query: 344 SDKCVALILSACEKENQLNRALEFL 368
++++ + N+L + ++ L
Sbjct: 516 DLITYSILMRGFYESNKLEKVVQLL 540
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 2/205 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y+ II G K + A M +G + VT +V++ M K G + A++
Sbjct: 236 NVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLL 295
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E + +G + +Y S++ + G L+ + L M ++ Y L+ GY
Sbjct: 296 EMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKT 355
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A ++F + G+ PD + +L+ A +AG+ A F+ ++ + P D C+
Sbjct: 356 LKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAM-PKDLCI 414
Query: 349 ALI-LSACEKENQLNRALEFLIDLE 372
I L K + A++ +LE
Sbjct: 415 CCIFLDGLCKNGYIFEAMKLFNELE 439
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 95/207 (45%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ YT +I G+ + +A+ ++M +G+ D ++ +++ Y K ++ A + F
Sbjct: 306 NLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLF 365
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E+ +G D ++ G ++ A AG +D + L R + + + L G N
Sbjct: 366 NEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKN 425
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G A ++F ++ + D LI+ AG+ + A+ F+ + + G++P
Sbjct: 426 GYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAY 485
Query: 349 ALILSACEKENQLNRALEFLIDLERDG 375
+ ++ K+ Q+++A +E +G
Sbjct: 486 SSMIHGFCKKGQVDKANILFQKMEENG 512
Score = 44.7 bits (104), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 46/251 (18%), Positives = 96/251 (38%), Gaps = 6/251 (2%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
++ + ++ +T +I G + +I A + M++ G + VT ++ G
Sbjct: 151 GIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALG 210
Query: 220 NLKMAEETFEEIKLLGEPL------DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYV 273
N+ +A + +E+ P + SY ++ + G + L EM Q V
Sbjct: 211 NINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQP 270
Query: 274 GSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAF 333
+ L+ G A+++ E + GI P+ LI + + G A F
Sbjct: 271 NVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELF 330
Query: 334 QNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRL 393
+M G EP ++++ K ++ A++ ++ G + S L
Sbjct: 331 VSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLA 390
Query: 394 GVVEEVEHVLR 404
G V++ + + R
Sbjct: 391 GKVDDAKELFR 401
>gi|255660908|gb|ACU25623.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 481
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 105/226 (46%), Gaps = 4/226 (1%)
Query: 141 VLKQLKLMEHPL-YLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR 199
VL K EH L + + E + L FE B + KII G+ ++ +A LL M ++
Sbjct: 18 VLHSAKTSEHALQFFRWVERSNL---FEHBRETHLKIIEILGRASKLNHARCILLDMPKK 74
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G D+ +M+ Y K G ++ + + F++++ LG +SY ++ +R G
Sbjct: 75 GLEWDEDMWVMMIDSYGKQGIVQESVKLFQKMEELGVERTLKSYDALFKVILRRGRYMMA 134
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+ +M ++ + + L+ G+ ++G E A R FE ++ I+PD +IN
Sbjct: 135 KRYFNKMLSEGIEPTRXXFNVLIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMING 194
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
Y + ++A F M+ +EP+ ++ +Q++ AL
Sbjct: 195 YYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 79/183 (43%), Gaps = 5/183 (2%)
Query: 175 KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLL 234
K+I G+ M + N +L+ G + V++ + +G ++ A FE++K
Sbjct: 123 KVILRRGRYMMAKRYFNKMLS---EGIEPTRXXFNVLIWGFFLSGKVETANRFFEDMKSR 179
Query: 235 GEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGA 294
D +Y +M+ Y R ++ E EM + + Y L++GY + A
Sbjct: 180 EISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDA 239
Query: 295 QRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV--ALIL 352
R+ E ++ GI P+A + L+ A + +A + + M L P+D + LI
Sbjct: 240 LRLXEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYLAPTDNSIFMRLIT 299
Query: 353 SAC 355
S C
Sbjct: 300 SQC 302
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 99/238 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y+ +I+GY K +I A M +R + + VT ++ G L+ A F
Sbjct: 353 NVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALF 412
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E+ G+ D +Y ++ + LD+ +L+ ++ + + Y ++ G
Sbjct: 413 HEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRV 472
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G E A +F ++ G+ PD ++IN + G +A F+ M G P D
Sbjct: 473 GELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTY 532
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREY 406
LI + N+ A++ L ++ GF + G+ + V+ +L E+
Sbjct: 533 NLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQILHEF 590
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 78/191 (40%), Gaps = 12/191 (6%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
++++++ E N+ Y II K Q+ A N M +G + T ++ K
Sbjct: 204 SMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFS 263
Query: 220 NLKMAEETFEEIKLLGEPLDKRS------YGSMVMAYVRAGMLDRGEVLLREMDAQEVYV 273
K L+ E +D + + ++V A + GM+ ++ M + V
Sbjct: 264 EWKHVA------TLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEP 317
Query: 274 GSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAF 333
Y AL+ G+ + + A +VF+ + G P+ + LIN Y + KA F
Sbjct: 318 DVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLF 377
Query: 334 QNMRKAGLEPS 344
+ M + L P+
Sbjct: 378 EEMCQRELVPN 388
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/205 (18%), Positives = 82/205 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ E F+ N Y +IHG K + A L +M ++ + +T ++ K
Sbjct: 170 MVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQ 229
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A F E+ G + +Y S++ + L+ EM ++ ++
Sbjct: 230 VNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTT 289
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G A V + + G+ PD L++ + + + +A F M + G
Sbjct: 290 LVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKG 349
Query: 341 LEPSDKCVALILSACEKENQLNRAL 365
P+ + +++ K ++++A+
Sbjct: 350 CAPNVISYSTLINGYCKIQRIDKAM 374
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 58/143 (40%)
Query: 234 LGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEG 293
LG P D + ++ ++ +D G +L ++ + + L+RG + G
Sbjct: 103 LGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGE 162
Query: 294 AQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILS 353
A +F+ + G P+ LI+ G S+ A ++M + EP+ I+
Sbjct: 163 ALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIID 222
Query: 354 ACEKENQLNRALEFLIDLERDGF 376
K+ Q+N AL ++ G
Sbjct: 223 CLFKDRQVNEALNIFSEMIAKGI 245
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 93/208 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++++ E N+ Y +IHG ++ A M+R G + + T ++++ ++K+G+
Sbjct: 340 MIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGD 399
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A ET+ + G + +Y MV + M D+ L+ +M + + +
Sbjct: 400 LVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNT 459
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++G NG E A ++ E +Q G P+ L++A + ++A+ FQ +
Sbjct: 460 FIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARN 519
Query: 341 LEPSDKCVALILSACEKENQLNRALEFL 368
L+P+ +L + + AL+
Sbjct: 520 LQPNLVTYNTVLYGFSRAGMMGEALQLF 547
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 95/233 (40%), Gaps = 5/233 (2%)
Query: 170 IRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFE 229
+R Y ++ + + Q MK+ G I + T +++ K + A + F
Sbjct: 144 VRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFV 203
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
E+ G P D +Y +MV + +AG +D RE+ A VY AL+ G G
Sbjct: 204 EMSNKGCPPDAVTYTTMVSSLCKAGKIDDA----REL-AGRFKPSVPVYNALIDGMCKEG 258
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
E A ++ + G+ P+ + +IN+ ++G + A+ F M G + +
Sbjct: 259 RIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFT 318
Query: 350 LILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
++ C +L AL+ + +DG A TL G +EE V
Sbjct: 319 PLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQV 371
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 99/256 (38%), Gaps = 11/256 (4%)
Query: 140 AVLKQLKL-MEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKR 198
A+L + K M +PLY + + L+ F NI ++ K ++ A + M
Sbjct: 153 ALLSENKFQMINPLYTNMKKDGLIPNVFTYNI-----LLKALCKNDRVDAAHKLFVEMSN 207
Query: 199 RGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDR 258
+G D VT T MV KAG + A E K P+ Y +++ + G ++
Sbjct: 208 KGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKP-SVPV----YNALIDGMCKEGRIEV 262
Query: 259 GEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLIN 318
LL EM V Y ++ ++GN E A +F + G + LI
Sbjct: 263 AIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIK 322
Query: 319 AYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMV 378
M G+ +A ++ M + G EP+ ++ L AL+ ++R G +
Sbjct: 323 GCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLP 382
Query: 379 GKEASCTLAAWFKRLG 394
L F + G
Sbjct: 383 NVTTYSILIDGFAKSG 398
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 42/213 (19%), Positives = 81/213 (38%), Gaps = 7/213 (3%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+F+ Y +I G++ ++ + L MK G C + ++ Y + G+ +
Sbjct: 68 NAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQ 127
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A + F I G R Y ++ A + L M + Y LL+
Sbjct: 128 ALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLK 187
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG-LE 342
N + A ++F + G PDA ++++ AG+ A AG +
Sbjct: 188 ALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAR------ELAGRFK 241
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDG 375
PS ++ KE ++ A++ L ++ +G
Sbjct: 242 PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNG 274
>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
Length = 760
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 89/206 (43%), Gaps = 3/206 (1%)
Query: 173 YTKIIHGY--GKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
Y +I Y G +M + A +A K G +T + M+ Y+K G A F+E
Sbjct: 263 YNTLIATYCRGGQMHLGAALMETMA-KSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQE 321
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
++ D Y +MV + R G D + R M+ Y ALL Y G
Sbjct: 322 MRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGK 381
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
A + E ++ G +P+ + LI+AY G + A FQ+++KAGL+P +
Sbjct: 382 FREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYST 441
Query: 351 ILSACEKENQLNRALEFLIDLERDGF 376
++ C K + AL L ++ +G
Sbjct: 442 LVDGCCKNGSPDEALALLEEMADNGI 467
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 88/214 (41%), Gaps = 6/214 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFIC--DQVTLTVMVVMYSKAGNLKM 223
F N+ Y+ +I YG+ ++ A AMK +C + V ++ SK G+
Sbjct: 152 FGNNVFVYSSLICAYGRSGKLAKAVEIFEAMK---VVCKPNLVVYNAVIDACSKGGDYPT 208
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F E+ G D+ ++ +++ A RA + + + EM+ + + Y L+
Sbjct: 209 ALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIA 268
Query: 284 GYSMNGNSEGAQRVFEAI-QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
Y G + E + + +GI P + +I+ Y G + +A FQ MR +E
Sbjct: 269 TYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVE 328
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
P C ++ + + A +E GF
Sbjct: 329 PDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGF 362
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 75/179 (41%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
E ++ Y+ +I GY K A M+ + D + MV ++++ GN A
Sbjct: 292 IEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAH 351
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
++ G D +Y +++ +Y + G LL EM + Y AL+ Y
Sbjct: 352 SIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAY 411
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
+G A +F+ ++ AG+ PD + + L++ G +A + M G+ P+
Sbjct: 412 CKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPN 470
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 71/166 (42%), Gaps = 4/166 (2%)
Query: 159 LALLEESFEANIRD----YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
+AL +E N+ Y ++ + + A + AM+ GF D VT ++
Sbjct: 316 IALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDS 375
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
Y K G + A EE+K G + +Y +++ AY + G L +++ +
Sbjct: 376 YGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPD 435
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAY 320
+Y L+ G NG+ + A + E + GI P+ L++AY
Sbjct: 436 VVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAY 481
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 89/205 (43%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E ++ + +++G K ++++A M R G D V+ +V Y KAG L
Sbjct: 218 EGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLH 277
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A F E+ G D ++ S++ A RAG L+R L+ +M + + + + AL+
Sbjct: 278 EALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALI 337
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G+ NG + A + ++ I P +LIN Y G+ +A M G++
Sbjct: 338 DGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMK 397
Query: 343 PSDKCVALILSACEKENQLNRALEF 367
P + ILS K + A E
Sbjct: 398 PDVVTYSTILSGYCKIGDTDSAFEL 422
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 89/196 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ GY K + A M ++G + D VT T ++ +AGNL+ A +++
Sbjct: 263 YNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMR 322
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G +++ ++ +++ + R G LD + ++EM + Y L+ GY G +
Sbjct: 323 ERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMD 382
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ + ++ G+ PD + +++ Y G + A+ + M K G+ P + ++
Sbjct: 383 EARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLI 442
Query: 353 SACEKENQLNRALEFL 368
+E +L A E
Sbjct: 443 RGLCEERRLGDACELF 458
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 99/226 (43%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y ++ + + ++ AE + M+ G VT +V KAG ++ A + F
Sbjct: 189 NVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMF 248
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+ G D SY ++V Y +AG L + EM + V + +L+
Sbjct: 249 DEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRA 308
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
GN E A + ++ G+ + LI+ + G A A + MR+ ++PS C
Sbjct: 309 GNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCY 368
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
++++ K +++ A E + ++E G T+ + + ++G
Sbjct: 369 NVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIG 414
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 105/262 (40%), Gaps = 24/262 (9%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRD 172
V P+ + L+ A R RA +A++ Q++ E N
Sbjct: 291 VVPDVVTFTSLIHAMCRAGNLERA--VALVGQMR----------------ERGLRMNEFT 332
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMK--RRGFICDQVTL-TVMVVMYSKAGNLKMAEETFE 229
+T +I G+ + + +A LLAMK R I V V++ Y K G + A E
Sbjct: 333 FTALIDGFCRNGFLDDA---LLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIH 389
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
E++ G D +Y +++ Y + G D L R+M + V + Y +L+RG
Sbjct: 390 EMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEER 449
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
A +FE + G+ PD LI+ + G QKA + M K G+ P +
Sbjct: 450 RLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYS 509
Query: 350 LILSACEKENQLNRALEFLIDL 371
+++ K + A L L
Sbjct: 510 VLIDGLSKSARTKEAQRLLFKL 531
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 110/254 (43%), Gaps = 19/254 (7%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y+ I+ GY K +A M ++G + D +T + ++ + L A E F
Sbjct: 399 DVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELF 458
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++ LG D+ +Y +++ + + G + + L EM + V Y L+ G S +
Sbjct: 459 EKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKS 518
Query: 289 GNSEGAQRV---------------FEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAF 333
++ AQR+ +EA+ T + + L+ + M G +A +
Sbjct: 519 ARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVY 578
Query: 334 QNM--RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFK 391
Q+M R L+ S V LI C N + +AL F L R GF ++ +L
Sbjct: 579 QSMLDRHWKLDGSVYSV-LIHGHCRGGNIM-KALSFHKQLLRCGFSPNSTSTISLVRGLF 636
Query: 392 RLGVVEEVEHVLRE 405
G+ E ++V++E
Sbjct: 637 EEGMTVEADNVIQE 650
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 94/222 (42%), Gaps = 1/222 (0%)
Query: 185 QIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF-EEIKLLGEPLDKRSY 243
+ +A L +M R G + T ++V G + A ++++ G + +Y
Sbjct: 134 SLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTY 193
Query: 244 GSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQF 303
++V A+ RAG +D E L+ M V + ++ G G E A+++F+ +
Sbjct: 194 NTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAR 253
Query: 304 AGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNR 363
G+TPD L++ Y AG +A F M + G+ P ++ A + L R
Sbjct: 254 EGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLER 313
Query: 364 ALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
A+ + + G + + L F R G +++ ++E
Sbjct: 314 AVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKE 355
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 38/200 (19%), Positives = 84/200 (42%), Gaps = 20/200 (10%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
L+ ++ +L L + F YT +I G+ K+ +Q A + M ++G + D VT +V+
Sbjct: 457 LFEKMLQLGLQPDEFT-----YTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVL 511
Query: 212 VVMYSKAGNLKMAEE---------------TFEEIKLLGEPLDKRSYGSMVMAYVRAGML 256
+ SK+ K A+ +E + + +S +++ + G++
Sbjct: 512 IDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLM 571
Query: 257 DRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALL 316
++ + + + M + + VY L+ G+ GN A + + G +P++ L
Sbjct: 572 NQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISL 631
Query: 317 INAYQMAGQSQKAYTAFQNM 336
+ G + +A Q +
Sbjct: 632 VRGLFEEGMTVEADNVIQEL 651
>gi|356544457|ref|XP_003540667.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 711
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 1/171 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ Y K +++ AE + MK +G + T +++ YS+ ++ E+ E++
Sbjct: 377 YNTLMDAYCKSNRVEEAEGLFIEMKTKGIKHTEATFNILMYAYSRKMQPEIVEKLMAEMQ 436
Query: 233 LLGEPLDKRSYGSMVMAYVR-AGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
G + +SY ++ AY + M D +M + S Y AL+ YS++G
Sbjct: 437 DAGLKPNAKSYTCLISAYGKQKNMSDMAADAFLKMKKDGIKPTSHSYTALIHAYSVSGWH 496
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
E A FE +Q GI P L++A++ AG +Q ++ MR+ +E
Sbjct: 497 EKAYAAFENMQREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMRRYKVE 547
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 102/223 (45%), Gaps = 4/223 (1%)
Query: 193 LLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVR 252
L ++++G + + ++ Y K+ ++ AE F E+K G + ++ ++ AY R
Sbjct: 362 LSELEKKGVSSNAIVYNTLMDAYCKSNRVEEAEGLFIEMKTKGIKHTEATFNILMYAYSR 421
Query: 253 AGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN-SEGAQRVFEAIQFAGITPDAR 311
+ E L+ EM + ++ Y L+ Y N S+ A F ++ GI P +
Sbjct: 422 KMQPEIVEKLMAEMQDAGLKPNAKSYTCLISAYGKQKNMSDMAADAFLKMKKDGIKPTSH 481
Query: 312 MCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDL 371
LI+AY ++G +KAY AF+NM++ G++PS + +L A + ++ +
Sbjct: 482 SYTALIHAYSVSGWHEKAYAAFENMQREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLM 541
Query: 372 ERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREY---GLRET 411
R + TL F + G +E V+ ++ GL T
Sbjct: 542 RRYKVEGTRVTFNTLVDGFAKHGHYKEARDVISKFANVGLHPT 584
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 99/209 (47%), Gaps = 2/209 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN-LKMAEET 227
++ Y I G + ++A +M+ + D VT ++MV++ K G+ K A +
Sbjct: 267 DVHVYNAAISGLLSSGRCEDAWKVYESMEADNVLPDHVTCSIMVIVMRKLGHSAKDAWQF 326
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
FE++ G + G+++ ++ G++ ++L E++ + V + VY L+ Y
Sbjct: 327 FEKMNGKGVKWGEEVLGALIKSFCVEGLMSEALIILSELEKKGVSSNAIVYNTLMDAYCK 386
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
+ E A+ +F ++ GI +L+ AY Q + M+ AGL+P+ K
Sbjct: 387 SNRVEEAEGLFIEMKTKGIKHTEATFNILMYAYSRKMQPEIVEKLMAEMQDAGLKPNAKS 446
Query: 348 VALILSACEKE-NQLNRALEFLIDLERDG 375
++SA K+ N + A + + +++DG
Sbjct: 447 YTCLISAYGKQKNMSDMAADAFLKMKKDG 475
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 94/211 (44%), Gaps = 1/211 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQN-AENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
N + YT +I YGK+ + + A + L MK+ G + T ++ YS +G + A
Sbjct: 443 NAKSYTCLISAYGKQKNMSDMAADAFLKMKKDGIKPTSHSYTALIHAYSVSGWHEKAYAA 502
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
FE ++ G +Y +++ A+ RAG + + M +V + L+ G++
Sbjct: 503 FENMQREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMRRYKVEGTRVTFNTLVDGFAK 562
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
+G+ + A+ V G+ P +L+NAY GQ K + M L+P
Sbjct: 563 HGHYKEARDVISKFANVGLHPTVMTYNMLMNAYARGGQHSKLPELLEEMAAHNLKPDSVT 622
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMV 378
+ ++ A + ++A + ++ + G ++
Sbjct: 623 YSTMIYAFLRVRDFSQAFFYHQEMVKSGQVI 653
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 6/165 (3%)
Query: 252 RAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDAR 311
+A M D+ +L + + + VY A + G +G E A +V+E+++ + PD
Sbjct: 245 KARMGDKLMLLFTNLPSGREFRDVHVYNAAISGLLSSGRCEDAWKVYESMEADNVLPDHV 304
Query: 312 MCALLINAYQMAGQSQK-AYTAFQNMRKAGLEPSDKCV-ALILSACEKENQLNRALEFLI 369
C++++ + G S K A+ F+ M G++ ++ + ALI S C E ++ AL L
Sbjct: 305 TCSIMVIVMRKLGHSAKDAWQFFEKMNGKGVKWGEEVLGALIKSFC-VEGLMSEALIILS 363
Query: 370 DLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREY---GLRET 411
+LE+ G TL + + VEE E + E G++ T
Sbjct: 364 ELEKKGVSSNAIVYNTLMDAYCKSNRVEEAEGLFIEMKTKGIKHT 408
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 50/122 (40%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
E + +I YT ++ + + Q M+R +VT +V ++K G+ K
Sbjct: 509 EGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMRRYKVEGTRVTFNTLVDGFAKHGHYKE 568
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A + + +G +Y ++ AY R G + LL EM A + S Y ++
Sbjct: 569 ARDVISKFANVGLHPTVMTYNMLMNAYARGGQHSKLPELLEEMAAHNLKPDSVTYSTMIY 628
Query: 284 GY 285
+
Sbjct: 629 AF 630
>gi|356541064|ref|XP_003539003.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 703
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 83/176 (47%), Gaps = 1/176 (0%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
+N Y ++ Y K +++ AE + MK +G + T +++ YS+ ++ E+
Sbjct: 364 SNTIVYNTLMDAYCKSNRVEEAEGLFVEMKTKGIKPTEATFNILMYAYSRKMQPEIVEKL 423
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVR-AGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
E++ G + +SY ++ AY + M D +M + S Y AL+ YS
Sbjct: 424 MAEMQETGLKPNAKSYTCIISAYGKQKNMSDMAADAFLKMKKDGIKPTSHSYTALIHAYS 483
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
++G E A FE +Q GI P L++A++ AG +Q ++ MR+ +E
Sbjct: 484 VSGWHEKAYAAFENMQREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMRREKVE 539
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 98/205 (47%), Gaps = 2/205 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN-LKMAEETFEEI 231
Y I G + ++A +M+ + D VT ++MV++ K G+ K A + FE++
Sbjct: 263 YNAAISGLLSSARYEDAWKVYESMEADNVLPDHVTCSIMVIVMRKLGHSAKDAWQFFEKM 322
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
G + G+++ ++ G++ ++L E++ + V + VY L+ Y +
Sbjct: 323 NGKGVKWGEEVLGALIKSFCVEGLMSEALIILSELEKKGVSSNTIVYNTLMDAYCKSNRV 382
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALI 351
E A+ +F ++ GI P +L+ AY Q + M++ GL+P+ K I
Sbjct: 383 EEAEGLFVEMKTKGIKPTEATFNILMYAYSRKMQPEIVEKLMAEMQETGLKPNAKSYTCI 442
Query: 352 LSACEKE-NQLNRALEFLIDLERDG 375
+SA K+ N + A + + +++DG
Sbjct: 443 ISAYGKQKNMSDMAADAFLKMKKDG 467
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 112/264 (42%), Gaps = 19/264 (7%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRD 172
+ P + L+ A+ R M+P + KLM AE+ E + N +
Sbjct: 397 IKPTEATFNILMYAYSRKMQPEIVE--------KLM--------AEMQ--ETGLKPNAKS 438
Query: 173 YTKIIHGYGKKMQIQN-AENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEI 231
YT II YGK+ + + A + L MK+ G + T ++ YS +G + A FE +
Sbjct: 439 YTCIISAYGKQKNMSDMAADAFLKMKKDGIKPTSHSYTALIHAYSVSGWHEKAYAAFENM 498
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
+ G +Y +++ A+ RAG + + M ++V + L+ G++ +G
Sbjct: 499 QREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMRREKVEGTRVTFNTLVDGFAKHGYY 558
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALI 351
+ A+ V G+ P +L+NAY G+ K + M L+P + +
Sbjct: 559 KEARDVISKFANVGLHPTVMTYNMLMNAYARGGRHSKLPELLEEMAAHNLKPDSVTYSTM 618
Query: 352 LSACEKENQLNRALEFLIDLERDG 375
+ A + ++A + ++ + G
Sbjct: 619 IYAFLRVRDFSQAFFYHQEMVKSG 642
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 3/156 (1%)
Query: 252 RAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDAR 311
+A M D+ VL + + + S VY A + G + E A +V+E+++ + PD
Sbjct: 237 KAKMGDKLMVLFTNLPSSREFRDSHVYNAAISGLLSSARYEDAWKVYESMEADNVLPDHV 296
Query: 312 MCALLINAYQMAGQSQK-AYTAFQNMRKAGLEPSDKCV-ALILSACEKENQLNRALEFLI 369
C++++ + G S K A+ F+ M G++ ++ + ALI S C E ++ AL L
Sbjct: 297 TCSIMVIVMRKLGHSAKDAWQFFEKMNGKGVKWGEEVLGALIKSFC-VEGLMSEALIILS 355
Query: 370 DLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+LE+ G TL + + VEE E + E
Sbjct: 356 ELEKKGVSSNTIVYNTLMDAYCKSNRVEEAEGLFVE 391
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 86/192 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I G + +I A + M +G + D VTL+ M+ KAG + A F+ ++
Sbjct: 273 YTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSME 332
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G ++ Y +++ +A +D +L +M + Y L+ G +G+ E
Sbjct: 333 ARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVE 392
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ F+ + AG PD +L++ + AG + A F +M + P+ ++
Sbjct: 393 AARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLI 452
Query: 353 SACEKENQLNRA 364
S K QL +A
Sbjct: 453 SGLCKRRQLTKA 464
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 1/203 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +IHG K ++ A L MK+ D +T +++ K+G+++ A F+E+
Sbjct: 343 YSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEML 402
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +V + +AG D + +M + Y L+ G
Sbjct: 403 EAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLT 462
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A F+ ++ G PD+ + + L++ +G+ + F M ++G+ S LI
Sbjct: 463 KASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIF 522
Query: 353 SACEKENQLNRALEFLIDLERDG 375
C K N+++ A+ + ++G
Sbjct: 523 HLC-KANRVDEAVSLFNAIRKEG 544
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 88/211 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ ++ YT +I G GK+ + A M RG + D V T ++ +AG
Sbjct: 226 IVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGK 285
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A ++ + G D + +M+ +AG + + + M+A+ + VY A
Sbjct: 286 IPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSA 345
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G + A + ++ A TPD +LI+ +G + A F M +AG
Sbjct: 346 LIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAG 405
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDL 371
+P +++S K + A D+
Sbjct: 406 CKPDVYTYNILVSGFCKAGNTDAACGVFDDM 436
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 99/244 (40%), Gaps = 16/244 (6%)
Query: 137 DWLAVLKQLKLMEHPLYLQVAELALLEESFEAN-----IRDYTKIIHGYGKKMQIQNAEN 191
DWLA K+++ + L E AN I Y +++G K +++ A +
Sbjct: 173 DWLAKNKKIQ-----------DAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAID 221
Query: 192 TLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYV 251
L + G D VT T ++ K A + F+E+ L G LD Y +++ +
Sbjct: 222 LLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLL 281
Query: 252 RAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDAR 311
+AG + + + + M +Q ++ G G A R+F++++ G+ P+
Sbjct: 282 QAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEV 341
Query: 312 MCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDL 371
+ + LI+ A + A M+KA P +++ K + A F ++
Sbjct: 342 VYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEM 401
Query: 372 ERDG 375
G
Sbjct: 402 LEAG 405
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 75/192 (39%), Gaps = 2/192 (1%)
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR-GFICDQVTLTVMVVMYSKAGN 220
L +F ++ + +I GY + + A + M+ G T +++ K+G
Sbjct: 86 LATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGK 145
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + FE G +D +Y ++V + + L+ ++ A Y A
Sbjct: 146 VLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNA 205
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL G G E A + I G TPD LI+ +S +AY F+ M G
Sbjct: 206 LLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRG 265
Query: 341 LEPSDKC-VALI 351
L C ALI
Sbjct: 266 LVLDTVCYTALI 277
>gi|297812025|ref|XP_002873896.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319733|gb|EFH50155.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 507
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 88/188 (46%), Gaps = 1/188 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+ +I+G+ + +++ A+ L MK+ G + + ++ + K G ++ A++ F+E+K
Sbjct: 272 FNVMINGFCRSGEVERAKMILDFMKKNGCNPNVYNYSALMNGFCKEGKIQEAKQVFDEVK 331
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G LD Y +++ R G +D LL EM A + Y +LRG S G SE
Sbjct: 332 KTGLKLDTVGYTTLMNCLCRNGEIDEAMKLLGEMKASRCRADALTYNVILRGLSSEGRSE 391
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC-VALI 351
A ++ + G+ + +++NA G+ +KA M K G+ P L+
Sbjct: 392 EALQMLDQWGCEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSKRGIWPHHATWNELV 451
Query: 352 LSACEKEN 359
+ CE N
Sbjct: 452 VRLCESGN 459
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 74/165 (44%), Gaps = 2/165 (1%)
Query: 243 YGSMVMAYVRAGMLDRGEVLLREMDAQEV-YVGSEVYKALLRGYSMNGNSEGAQRVFE-A 300
+ +V + + G +D ++ EM + Y S Y L+ S+ A +FE
Sbjct: 200 FNILVKHHCKNGDIDSAFRVVEEMKRSGISYPNSITYSTLMDCLFAQSRSKEAVELFEDM 259
Query: 301 IQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQ 360
I GI+PD + ++IN + +G+ ++A M+K G P+ + +++ KE +
Sbjct: 260 ISKRGISPDPVIFNVMINGFCRSGEVERAKMILDFMKKNGCNPNVYNYSALMNGFCKEGK 319
Query: 361 LNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ A + ++++ G + TL R G ++E +L E
Sbjct: 320 IQEAKQVFDEVKKTGLKLDTVGYTTLMNCLCRNGEIDEAMKLLGE 364
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 90/207 (43%), Gaps = 4/207 (1%)
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGF-ICDQVTL-TVMVVMYSKAGNLK 222
+ + N + ++ + K I +A + MKR G + +T T+M +++++ + K
Sbjct: 192 ALQPNTCIFNILVKHHCKNGDIDSAFRVVEEMKRSGISYPNSITYSTLMDCLFAQSRS-K 250
Query: 223 MAEETFEE-IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
A E FE+ I G D + M+ + R+G ++R +++L M Y AL
Sbjct: 251 EAVELFEDMISKRGISPDPVIFNVMINGFCRSGEVERAKMILDFMKKNGCNPNVYNYSAL 310
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+ G+ G + A++VF+ ++ G+ D L+N G+ +A M+ +
Sbjct: 311 MNGFCKEGKIQEAKQVFDEVKKTGLKLDTVGYTTLMNCLCRNGEIDEAMKLLGEMKASRC 370
Query: 342 EPSDKCVALILSACEKENQLNRALEFL 368
+IL E + AL+ L
Sbjct: 371 RADALTYNVILRGLSSEGRSEEALQML 397
>gi|168024390|ref|XP_001764719.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684013|gb|EDQ70418.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1020
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 110/250 (44%), Gaps = 19/250 (7%)
Query: 142 LKQLKLME--HPLYLQVAEL-ALLEESFE--------ANIRDYTKIIHGYGKKMQIQNAE 190
L +L LM+ H + +V + +E++F + ++ YT ++ I A
Sbjct: 267 LDKLSLMKVNHSKFYEVCKTKGTVEDAFTFAKIMRVYSTLQHYTMLLSVCCHAKDIDGAL 326
Query: 191 NTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAY 250
L ++ RGF D V T ++ SKAG + + + E+ + G + ++G+M+
Sbjct: 327 RVLALVESRGFKADCVFYTTLISACSKAGKVDLLFQILHEMDVAGVEANVHTFGAMIDGC 386
Query: 251 VRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI-----QFAG 305
RAG L + M +++V ++ L+ S G QR F+ + +
Sbjct: 387 ARAGQLPKAFGAYGIMISKDVKPDRVIFNTLINACSRVG---AVQRAFDVLADMKSEATP 443
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
+ PD LI+A G+ +A +Q+MR+ ++ C + AC ++ L+ AL
Sbjct: 444 VKPDHVTYGALISACAKGGEVGRALEVYQSMRENDVKGFLACYTAAVHACSQKGDLDYAL 503
Query: 366 EFLIDLERDG 375
DL +DG
Sbjct: 504 AIYDDLLKDG 513
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 91/202 (45%), Gaps = 2/202 (0%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
EAN+ + +I G + Q+ A M + D+V ++ S+ G ++ A +
Sbjct: 373 EANVHTFGAMIDGCARAGQLPKAFGAYGIMISKDVKPDRVIFNTLINACSRVGAVQRAFD 432
Query: 227 TFEEIKLLGEPL--DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
++K P+ D +YG+++ A + G + R + + M +V Y A +
Sbjct: 433 VLADMKSEATPVKPDHVTYGALISACAKGGEVGRALEVYQSMRENDVKGFLACYTAAVHA 492
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
S G+ + A +++ + G+ PD + L++A +G KA++ MRK+G++P
Sbjct: 493 CSQKGDLDYALAIYDDLLKDGVKPDEVFFSALVDAAGHSGDVDKAFSILDIMRKSGMKPG 552
Query: 345 DKCVALILSACEKENQLNRALE 366
+ ++ C + + LE
Sbjct: 553 AVVYSSLMGVCSNLGEWEKGLE 574
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 92/207 (44%), Gaps = 6/207 (2%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKR---RGFICDQVTLTVMVVMYSKAGNLKMAEETFE 229
Y +I K ++ A +M+ +GF+ T V S+ G+L A ++
Sbjct: 451 YGALISACAKGGEVGRALEVYQSMRENDVKGFL---ACYTAAVHACSQKGDLDYALAIYD 507
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
++ G D+ + ++V A +G +D+ +L M + G+ VY +L+ S G
Sbjct: 508 DLLKDGVKPDEVFFSALVDAAGHSGDVDKAFSILDIMRKSGMKPGAVVYSSLMGVCSNLG 567
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
E V+E I+ + + P L+ A A Q +A + +++ AG P+ +
Sbjct: 568 EWEKGLEVYEGIRSSKLRPTVSTYNALMTALCEAKQFDRALSVLNDLKDAGRTPNQVSYS 627
Query: 350 LILSACEKENQLNRALEFLIDLERDGF 376
++L ACE+E + + AL+ +G
Sbjct: 628 ILLKACEREGKADMALDLYTTARAEGI 654
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 2/135 (1%)
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y L+ S G + ++ + AG+ + +I+ AGQ KA+ A+ M
Sbjct: 344 YTTLISACSKAGKVDLLFQILHEMDVAGVEANVHTFGAMIDGCARAGQLPKAFGAYGIMI 403
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
++P +++AC + + RA + L D++ + V K T A
Sbjct: 404 SKDVKPDRVIFNTLINACSRVGAVQRAFDVLADMKSEATPV-KPDHVTYGALISACAKGG 462
Query: 398 EVEHVLREY-GLRET 411
EV L Y +RE
Sbjct: 463 EVGRALEVYQSMREN 477
>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g12100, mitochondrial; Flags: Precursor
gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 816
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 102/215 (47%), Gaps = 2/215 (0%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ E ++ + ++ G K +++AEN L MK GF+ D T +++ YS +
Sbjct: 278 DHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEA 337
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG-EVLLREMDAQEVYVGSEVYKALL 282
A +E G ++ + ++ A + G +++ E+L REM A+ + +Y ++
Sbjct: 338 ALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREM-AKGLVPNEVIYNTMI 396
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
GY G+ GA+ EA++ G+ PD LI + G+ + A M+ G+
Sbjct: 397 DGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVS 456
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
PS + +++ ++ + ++ + L ++E +G M
Sbjct: 457 PSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTM 491
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 85/190 (44%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y +I GYG+K + + L M+ G + + V+ ++ K L A+
Sbjct: 458 SVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVK 517
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+++ G R Y ++ G ++ +EM + + + Y L+ G SM
Sbjct: 518 RDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMT 577
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G A+ + I G+ PD LI+ Y AG Q+ ++ M+++G++P+ K
Sbjct: 578 GKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTY 637
Query: 349 ALILSACEKE 358
L++S C KE
Sbjct: 638 HLLISLCTKE 647
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 109/251 (43%), Gaps = 6/251 (2%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G K ++ +AE M R + +T ++ Y KAGN + + + E +K
Sbjct: 217 YNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMK 276
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
++ +++ +AGM++ E +L+EM + + L GYS N +E
Sbjct: 277 ADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAE 336
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A V+E +G+ +A C++L+NA G+ +KA GL P++ ++
Sbjct: 337 AALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMI 396
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLR--- 409
++ L A + +E+ G A L F LG +E E + + L+
Sbjct: 397 DGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVS 456
Query: 410 ---ETYSKIPG 417
ETY+ + G
Sbjct: 457 PSVETYNILIG 467
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 90/204 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I GY +K + A + AM+++G D + ++ + + G ++ AE+ ++K
Sbjct: 392 YNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMK 451
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
L G +Y ++ Y R D+ +L+EM+ Y L+
Sbjct: 452 LKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLL 511
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
AQ V ++ G++P R+ +LI+ G+ + A+ + M K G+E + ++
Sbjct: 512 EAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLI 571
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
+L+ A + L+++ R G
Sbjct: 572 DGLSMTGKLSEAEDLLLEISRKGL 595
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 94/230 (40%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
+++ K+ +I+ AE L +G + ++V M+ Y + G+L A E ++ G
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQG 419
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
D +Y ++ + G ++ E + +M + V E Y L+ GY +
Sbjct: 420 MKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCF 479
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
+ + ++ G P+ LIN + +A ++M G+ P + +++ C
Sbjct: 480 DILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGC 539
Query: 356 EKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ ++ A F ++ + G + TL G + E E +L E
Sbjct: 540 CSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLE 589
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 109/250 (43%), Gaps = 6/250 (2%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L++ E N+ Y +I G ++ AE+ LL + R+G D T ++ Y AGN
Sbjct: 555 MLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGN 614
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ +EE+K G ++Y ++ + G ++ E L EM + + VY
Sbjct: 615 VQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-IELTERLFGEMSLKPDLL---VYNG 670
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+L Y+++G+ E A + + + I D LI G+ + + M
Sbjct: 671 VLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNARE 730
Query: 341 LEP-SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEV 399
+EP +D ++ CE ++ ++ A + +++ GF++ L + K +E
Sbjct: 731 MEPEADTYNIIVKGHCEVKDYMS-AYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEA 789
Query: 400 EHVLREYGLR 409
E V+ E R
Sbjct: 790 EIVISEMNGR 799
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 8/190 (4%)
Query: 155 QVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
Q+ + + + +R Y +I G K +I++A M ++G + VT ++
Sbjct: 514 QIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDG 573
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
S G L AE+ EI G D +Y S++ Y AG + R L EM +
Sbjct: 574 LSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPT 633
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+ Y L+ + G E +R+F + + PD + +++ Y + G +KA+
Sbjct: 634 LKTYHLLISLCTKEG-IELTERLFGEMS---LKPDLLVYNGVLHCYAVHGDMEKAF---- 685
Query: 335 NMRKAGLEPS 344
N++K +E S
Sbjct: 686 NLQKQMIEKS 695
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 75/192 (39%)
Query: 186 IQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGS 245
I A + A++ G +LT+++ K ++ F I K YG
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184
Query: 246 MVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAG 305
+ A V+ + +G L M +Y +Y L+ G A+++F+ +
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
+ P LI+ Y AG +K++ + M+ +EPS +L K + A
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304
Query: 366 EFLIDLERDGFM 377
L +++ GF+
Sbjct: 305 NVLKEMKDLGFV 316
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 95/239 (39%), Gaps = 38/239 (15%)
Query: 154 LQVAELALLEES---FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTV 210
L AE LLE S + ++ Y +I GYG +Q MKR G T +
Sbjct: 580 LSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHL 639
Query: 211 MVVMYSKAGNLKMAEETFEEIKLLGE--------------------------------PL 238
++ + +K G +++ E F E+ L + L
Sbjct: 640 LISLCTKEG-IELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGL 698
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
DK +Y S+++ ++ G L L+ EM+A+E+ ++ Y +++G+ + A +
Sbjct: 699 DKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWY 758
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEK 357
+Q G D + L++ + +S++A M G D V LSA EK
Sbjct: 759 REMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMN--GRMLGDVTVDEDLSATEK 815
>gi|255660878|gb|ACU25608.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 484
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 112/243 (46%), Gaps = 6/243 (2%)
Query: 141 VLKQLKLMEHPL-YLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR 199
VL K EH L + + E + L FE N + KII G+ ++ +A LL M ++
Sbjct: 18 VLHSSKTSEHALQFFRWVERSNL---FEHNRETHLKIIEILGRASKLNHARCILLDMPKK 74
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G D+ +M+ Y K G ++ + + F++++ LG +SY ++ +R G
Sbjct: 75 GLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMA 134
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+ +M ++ + + ++ G+ ++G E A R FE ++ I+PD +IN
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMING 194
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
Y + ++A F M+ +EP+ ++ +Q++ L + +++ GF +
Sbjct: 195 YYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDXLRLVEEMK--GFGIK 252
Query: 380 KEA 382
A
Sbjct: 253 PNA 255
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 8/202 (3%)
Query: 163 EESFEANIRDYT---KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
E E I+ Y K+I G+ M + N +L+ G + T VM+ + +G
Sbjct: 108 ELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLS---EGIEPTRHTFNVMIWGFFLSG 164
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A FE++K D +Y +M+ Y R ++ E EM + + Y
Sbjct: 165 KVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYT 224
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L++GY + R+ E ++ GI P+A + L+ A + +A + M
Sbjct: 225 TLIKGYVSVDQVDDXLRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDK 284
Query: 340 GLEPSDKCV--ALILSACEKEN 359
L P+D + LI S C+ N
Sbjct: 285 YLAPTDNSIFMRLISSHCKSGN 306
>gi|255660936|gb|ACU25637.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 484
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 86/179 (48%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
FE N + KII G+ ++ +A LL M ++G D+ +M+ Y KAG ++ +
Sbjct: 41 FEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDLWVLMIDSYGKAGIVQESV 100
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+ F++++ LG +SY + +R G + +M ++ + + ++ G+
Sbjct: 101 KLFQKMEELGVERTIKSYDVLFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNIMIWGF 160
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
++G E A R FE ++ ITPD +IN Y + ++A F M+ +EP+
Sbjct: 161 FLSGKVETANRFFEDMKSRXITPDVITYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPT 219
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 90/210 (42%), Gaps = 7/210 (3%)
Query: 163 EESFEANIRDYT---KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
E E I+ Y K+I G+ M + N +L+ G + T +M+ + +G
Sbjct: 108 ELGVERTIKSYDVLFKVILRRGRYMMAKRYFNKMLS---EGIEPTRHTFNIMIWGFFLSG 164
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A FE++K D +Y +M+ Y R ++ E EM + +
Sbjct: 165 KVETANRFFEDMKSRXITPDVITYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTXT 224
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L++GY + A R+ E ++ GI P+A + L+ A + +A + + M
Sbjct: 225 TLIKGYVSVDRVDDALRLXEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARSXLKEMVDK 284
Query: 340 GLEPSDKCVAL-ILSACEKENQLNRALEFL 368
+ P+D + L ++S K L+ A + L
Sbjct: 285 YIAPTDNSIFLRLISGQCKAGNLDAAADVL 314
>gi|242055653|ref|XP_002456972.1| hypothetical protein SORBIDRAFT_03g046570 [Sorghum bicolor]
gi|241928947|gb|EES02092.1| hypothetical protein SORBIDRAFT_03g046570 [Sorghum bicolor]
Length = 821
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 86/189 (45%), Gaps = 1/189 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G K+M+++ AE L R G D + ++ + K GNL+ A E++
Sbjct: 302 YNMVIDGLCKEMKLEEAEKVLEIKTRHGSTPDLYGYSYLIHSHCKMGNLEKAWYHIEDMV 361
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G ++ GS++ + GM+ V ++ +++ +Y + Y GN
Sbjct: 362 SHGIEINCHIVGSLLQCLRKLGMISEVIVHFQKFRDLGLHLDGVLYNVAMDAYCKLGNMN 421
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A ++ + G+ PD LIN Y + G+++ A+ F+ M KA ++P D IL
Sbjct: 422 EAVKLLNEMMAGGLVPDKIHYTCLINGYCLKGETENAWQVFEQMLKANIKP-DVVTYNIL 480
Query: 353 SACEKENQL 361
S+ N L
Sbjct: 481 SSGYSRNGL 489
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 17/199 (8%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+LE++ ++ Y+K+I Y + ++NA M RG + D T+++ Y K G
Sbjct: 605 MLEKNVVPHVISYSKLISAYCQSRDMRNAHLWFHDMVERG-LSDVTAYTILMNGYCKVGQ 663
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLD----------------RGEVLLR 264
L+ A E F ++ LG D +Y ++ +++ + + +VLL
Sbjct: 664 LQEACELFVQMVNLGIKPDVVAYTVLLDGHLKETLQQGWQGIAKERRTFFLRTKHKVLLS 723
Query: 265 EMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAG 324
M E+ Y L+ G E A+ +F+ + G+TPD LIN Y G
Sbjct: 724 SMKEMEIEPDVTCYTVLIYGQCKAEYLEEARGLFDEMLAKGLTPDVDAYTTLINGYCSQG 783
Query: 325 QSQKAYTAFQNMRKAGLEP 343
+ KA FQ M G++P
Sbjct: 784 EIAKAEDLFQEMIDKGMKP 802
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 1/202 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I+GY K + +NA M + D VT ++ YS+ G + + E +
Sbjct: 442 YTCLINGYCLKGETENAWQVFEQMLKANIKPDVVTYNILSSGYSRNGLVMKVFDLLEHMM 501
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +YG + + R G L EVL ++ + + +Y +++ GY +G ++
Sbjct: 502 DQGLEPNSLTYGIAIAGFCRGGNLSEAEVLFNIVEEKGIDNIDVLYSSMVCGYLHSGWTD 561
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +F + G D C+ LIN + Q+A T M + + P + ++
Sbjct: 562 HAYMLFLRVAKQGNMVDHLSCSKLINGLCRDEKVQEASTVCSMMLEKNVVPHVISYSKLI 621
Query: 353 SA-CEKENQLNRALEFLIDLER 373
SA C+ + N L F +ER
Sbjct: 622 SAYCQSRDMRNAHLWFHDMVER 643
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 81/219 (36%), Gaps = 11/219 (5%)
Query: 141 VLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRG 200
V+K L+EH ++++ E N Y I G+ + + AE ++ +G
Sbjct: 490 VMKVFDLLEH----------MMDQGLEPNSLTYGIAIAGFCRGGNLSEAEVLFNIVEEKG 539
Query: 201 FICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGE 260
V + MV Y +G A F + G +D S ++ R +
Sbjct: 540 IDNIDVLYSSMVCGYLHSGWTDHAYMLFLRVAKQGNMVDHLSCSKLINGLCRDEKVQEAS 599
Query: 261 VLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAY 320
+ M + V Y L+ Y + + A F + G++ D +L+N Y
Sbjct: 600 TVCSMMLEKNVVPHVISYSKLISAYCQSRDMRNAHLWFHDMVERGLS-DVTAYTILMNGY 658
Query: 321 QMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKEN 359
GQ Q+A F M G++P ++L KE
Sbjct: 659 CKVGQLQEACELFVQMVNLGIKPDVVAYTVLLDGHLKET 697
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 69/186 (37%), Gaps = 1/186 (0%)
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G D V V + Y K GN+ A + E+ G DK Y ++ Y G +
Sbjct: 399 GLHLDGVLYNVAMDAYCKLGNMNEAVKLLNEMMAGGLVPDKIHYTCLINGYCLKGETENA 458
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+ +M + Y L GYS NG + E + G+ P++ + I
Sbjct: 459 WQVFEQMLKANIKPDVVTYNILSSGYSRNGLVMKVFDLLEHMMDQGLEPNSLTYGIAIAG 518
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
+ G +A F + + G++ D + ++ + A + + + G MV
Sbjct: 519 FCRGGNLSEAEVLFNIVEEKGIDNIDVLYSSMVCGYLHSGWTDHAYMLFLRVAKQGNMV- 577
Query: 380 KEASCT 385
SC+
Sbjct: 578 DHLSCS 583
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 70/162 (43%), Gaps = 22/162 (13%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSK----AGNLKM 223
+++ YT +++GY K Q+Q A + M G D V TV++ + K G +
Sbjct: 646 SDVTAYTILMNGYCKVGQLQEACELFVQMVNLGIKPDVVAYTVLLDGHLKETLQQGWQGI 705
Query: 224 AEE---------------TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
A+E + +E+++ EP D Y ++ +A L+ L EM A
Sbjct: 706 AKERRTFFLRTKHKVLLSSMKEMEI--EP-DVTCYTVLIYGQCKAEYLEEARGLFDEMLA 762
Query: 269 QEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDA 310
+ + + Y L+ GY G A+ +F+ + G+ PD
Sbjct: 763 KGLTPDVDAYTTLINGYCSQGEIAKAEDLFQEMIDKGMKPDV 804
>gi|242054089|ref|XP_002456190.1| hypothetical protein SORBIDRAFT_03g031900 [Sorghum bicolor]
gi|241928165|gb|EES01310.1| hypothetical protein SORBIDRAFT_03g031900 [Sorghum bicolor]
Length = 731
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 88/192 (45%), Gaps = 8/192 (4%)
Query: 154 LQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFIC-----DQVTL 208
L E+ LL +++ N R YT ++ GY ++ + L AM++ D VT
Sbjct: 362 LGADEVPLLPKAYPPNARVYTTLMKGYMNAGRVDDVVAVLRAMRQEARTAPASRPDHVTY 421
Query: 209 TVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM-- 266
T ++ AG++ A +E+ G P ++ +Y ++ Y + + + L EM
Sbjct: 422 TTVMSALVGAGDVARAHAVLDEMAADGVPANRVTYNVLLKGYCQQLQIGKARELFEEMVT 481
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
DA + G Y L+ G ++ +S GA F ++ GI P L+ A+ ++GQ
Sbjct: 482 DAG-IQPGVVTYNTLMDGCVLSDDSAGALAFFNEMRSRGIAPSTVSYTTLMKAFAVSGQP 540
Query: 327 QKAYTAFQNMRK 338
+ A+ F+ M +
Sbjct: 541 KVAHKVFEEMER 552
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 91/224 (40%), Gaps = 11/224 (4%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNA-----ENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
+ AN Y ++ GY +++QI A E A + G + + V+ A
Sbjct: 447 DGVPANRVTYNVLLKGYCQQLQIGKARELFEEMVTDAGIQPGVVTYNTLMDGCVLSDDSA 506
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQ-EVYVGSEV 277
G L F E++ G SY +++ A+ +G + EM+ V V
Sbjct: 507 GALAF----FNEMRSRGIAPSTVSYTTLMKAFAVSGQPKVAHKVFEEMERDPRVTVDRAA 562
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
+ L+ GY G E A++V E ++ G+ PD L MA + +A + ++
Sbjct: 563 WNMLVEGYCRLGQVETAKQVVERMKERGVQPDVATYGSLAKGVAMARKPGEALVLWNEVK 622
Query: 338 KAGLEPSD-KCVALILSACEKENQLNRALEFLIDLERDGFMVGK 380
+ LE +D + + + C + +ALE + +E G K
Sbjct: 623 ERCLEEADEELLGALADVCVRAAFFKKALEIVACMEEKGIAPNK 666
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 86/170 (50%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I + +K Q+++A L M +G + + +T ++ Y ++GN+ ++ +++
Sbjct: 413 YSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMM 472
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ D +Y +++ Y++ + LL M+ ++V Y L+ G+S++GN +
Sbjct: 473 VNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQ 532
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
A +FE + GI PD +IN + AG S++A+ M + G E
Sbjct: 533 EAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGKE 582
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 83/185 (44%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+L + +I Y +I G ++ + A + M R + VT ++++ + + G
Sbjct: 365 TMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKG 424
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A +E+ G + +Y S++ Y R+G + +G+ L++M +V Y
Sbjct: 425 QVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYN 484
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ GY A ++ ++ + PD +LIN + + G Q+A F+ M
Sbjct: 485 TLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAK 544
Query: 340 GLEPS 344
G+EP
Sbjct: 545 GIEPD 549
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 86/199 (43%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E N ++H Y K ++ + + M++R D VT VMV +AG+ + A
Sbjct: 92 EVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMA 151
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
+ + G +Y S++ R+GM D+ + +EMD V + L+ G+
Sbjct: 152 LVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFC 211
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G E A ++++ ++ GI PD + LI + G+ A + MR GL P
Sbjct: 212 RVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGV 271
Query: 347 CVALILSACEKENQLNRAL 365
+++ + ++ AL
Sbjct: 272 IYTMVIGGFCRAGLMSDAL 290
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 92/208 (44%), Gaps = 4/208 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y +++G K+ ++ +AE L M+ RG D T T ++ Y G L A + F
Sbjct: 304 DVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLF 363
Query: 229 EEIKLLGEPL--DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
+ +L + L D +Y +++ R G LD+ L +M ++E++ Y L+ +
Sbjct: 364 D--TMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHC 421
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G E A + + GI P+ +I Y +G K Q M + P
Sbjct: 422 EKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLI 481
Query: 347 CVALILSACEKENQLNRALEFLIDLERD 374
++ KE++++ A + L +E++
Sbjct: 482 TYNTLIHGYIKEDKMHDAFKLLNMMEKE 509
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 89/199 (44%)
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
TL +MV Y KA + E++ D ++ MV A RAG + L+ M
Sbjct: 97 TLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSM 156
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
++ + G Y ++L+G +G + A VF+ + G+ PD R +LI + G+
Sbjct: 157 VSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEI 216
Query: 327 QKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
++A ++ MR G++P + ++ + +++ A+ +L ++ G + +
Sbjct: 217 EEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMV 276
Query: 387 AAWFKRLGVVEEVEHVLRE 405
F R G++ + V E
Sbjct: 277 IGGFCRAGLMSDALRVRDE 295
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/273 (19%), Positives = 109/273 (39%), Gaps = 37/273 (13%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++R +T +I G+ + +I+ A M+ RG D V+ + ++ ++++ G + A
Sbjct: 199 DVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYL 258
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG----------------------------- 259
E++ G D Y ++ + RAG++
Sbjct: 259 REMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKE 318
Query: 260 ------EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
E LL EM + V + L+ GY + G + A ++F+ + + PD
Sbjct: 319 RRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTY 378
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL-SACEKENQLNRALEFLIDLE 372
LI+ G KA + +M + P+ ++++ S CEK Q+ A FL ++
Sbjct: 379 NTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEK-GQVEDAFGFLDEMI 437
Query: 373 RDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
G + ++ + R G V + + L++
Sbjct: 438 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQK 470
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 87/211 (41%), Gaps = 4/211 (1%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+++ + + I Y ++ G + A M G D + T+++ + + G
Sbjct: 155 SMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVG 214
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A + ++E++ G D S+ ++ + R G +D LREM + +Y
Sbjct: 215 EIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYT 274
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
++ G+ G A RV + + G PD L+N + A MR+
Sbjct: 275 MVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRER 334
Query: 340 GLEPSDKC--VALILSACEKENQLNRALEFL 368
G+ P D C LI C E +L++AL+
Sbjct: 335 GV-PPDLCTFTTLIHGYC-IEGKLDKALQLF 363
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 115/257 (44%), Gaps = 18/257 (7%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRD 172
V P+ S L+ W R+ D + LKL Y ++ L S++ ++
Sbjct: 144 VEPDKFTFSALITGWC---NARKVD-----EALKL-----YKEI----LTSSSWKPDVVT 186
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I G+ K ++ A L M+ R + + VT + ++ KAG+L A + F +
Sbjct: 187 YTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMT 246
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +Y +++ A +D +L+ EM A + Y ALL GY G E
Sbjct: 247 SKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIE 306
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK-AGLEPSDKCVALI 351
A+++F+ + PD L+ + A + ++A +NM+ AG++P +++
Sbjct: 307 EAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIV 366
Query: 352 LSACEKENQLNRALEFL 368
++ + + A EF+
Sbjct: 367 VAGYSRAKRFVEAAEFI 383
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 113/269 (42%), Gaps = 28/269 (10%)
Query: 112 CVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIR 171
C P+T + + LL + R + A KQL + ++A + L +
Sbjct: 284 CCPPDTVSYNALLDGYCRLGRIEEA------KQL-------FKEMATKSCLPDRIT---- 326
Query: 172 DYTKIIHGYGKKMQIQNAENTLLAMKRR-GFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
YT ++ G+ +++ A L MK G D VT +++V YS+A A E +E
Sbjct: 327 -YTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQE 385
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
+ + +Y S++ +AG +D +L+ M + V + +++ G+
Sbjct: 386 MIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGD 445
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR--------KAGLE 342
+ A ++ A+ G+ P L+ + G+ + AY F+ MR A L
Sbjct: 446 MDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLV 505
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDL 371
P ALI C K ++++A+ + +L
Sbjct: 506 PEQAFSALIRGLC-KAREIDKAMAVVEEL 533
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 87/201 (43%), Gaps = 22/201 (10%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
+ ++ Y+ ++ GY + + A + M R + VT + ++ KAG + A
Sbjct: 356 IDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAM 415
Query: 226 ETFEEIKLLGEPLDKR------SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
E + + ++KR ++ S++ A R G +D LL M A + G Y
Sbjct: 416 EVLKNM------VNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYT 469
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQ--------FAGITPDARMCALLINAYQMAGQSQKAYT 331
LL G+S G E A +FE ++ A + P+ A LI A + KA
Sbjct: 470 TLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSA-LIRGLCKAREIDKAMA 528
Query: 332 AFQNMRKAGLEPSDK-CVALI 351
+ +R EP+++ C+A++
Sbjct: 529 VVEELRSRECEPAEEDCLAIV 549
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 86/210 (40%), Gaps = 3/210 (1%)
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKR-RGFICDQVTLTVMVVMYSKAGN 220
+ E N R Y +++G K A L M+ + D VT + ++ + K G
Sbjct: 33 MREFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGE 92
Query: 221 LKMAEETFEE-IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ A E E + G D +Y S+V R G +DR ++REM + V +
Sbjct: 93 MDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFS 152
Query: 280 ALLRGYSMNGNSEGAQRVF-EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
AL+ G+ + A +++ E + + PD LI+ + +G +KA M
Sbjct: 153 ALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEG 212
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFL 368
P+ + +L K L++AL+
Sbjct: 213 RKCVPNVVTYSSLLHGLCKAGDLDQALDLF 242
>gi|255660924|gb|ACU25631.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 484
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 106/240 (44%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
FE N + KII G+ ++ +A LL M ++G D+ +M+ Y K G ++ +
Sbjct: 41 FEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVLMIDSYGKEGIVQESV 100
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+ F++++ LG +SY ++ +R G + +M + + + ++ G+
Sbjct: 101 KLFQKMEELGVERTIKSYDALFKVIMRRGRFMMAKRYFNKMLSXGIEPTRHTFNVMIWGF 160
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
++G E A R FE ++ I+PD +IN Y + ++A F M+ +EP+
Sbjct: 161 FLSGKVETANRFFEDMKSREISPDVITYNTMINGYYRVKKMEEAEKYFVEMKGKNIEPTV 220
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ +Q++ AL + +++ G TL + E +L+E
Sbjct: 221 VTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKE 280
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 87/202 (43%), Gaps = 8/202 (3%)
Query: 163 EESFEANIRDYT---KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
E E I+ Y K+I G+ M + N +L+ G + T VM+ + +G
Sbjct: 108 ELGVERTIKSYDALFKVIMRRGRFMMAKRYFNKMLSX---GIEPTRHTFNVMIWGFFLSG 164
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A FE++K D +Y +M+ Y R ++ E EM + + Y
Sbjct: 165 KVETANRFFEDMKSREISPDVITYNTMINGYYRVKKMEEAEKYFVEMKGKNIEPTVVTYT 224
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L++GY + A R+ E ++ GI P+A + L+ A + +A + + M
Sbjct: 225 TLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDK 284
Query: 340 GLEPSDKCV--ALILSACEKEN 359
+ P+D + LI S C+ N
Sbjct: 285 YIAPTDNSIFMRLISSQCKAGN 306
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 57/138 (41%), Gaps = 11/138 (7%)
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
KAGNL A + + + L P + YG ++ Y +AG D+ LL ++ +++ V +
Sbjct: 303 KAGNLDAAADVLKSMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDKLIEKDIIVRPQ 362
Query: 277 --------VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
Y ++ NG + A+ + + G+ D LI + G
Sbjct: 363 STLHMEPSAYNPIVEYLCNNGQTSKAEALVRQLMKLGVQ-DPTALNTLIRGHSQEGSPDS 421
Query: 329 AYTAFQNM--RKAGLEPS 344
A+ + M RK G E S
Sbjct: 422 AFELLKIMLRRKVGSEKS 439
>gi|242091740|ref|XP_002436360.1| hypothetical protein SORBIDRAFT_10g001070 [Sorghum bicolor]
gi|241914583|gb|EER87727.1| hypothetical protein SORBIDRAFT_10g001070 [Sorghum bicolor]
Length = 999
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 88/195 (45%), Gaps = 1/195 (0%)
Query: 180 YGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLD 239
Y K A + L M+ I D+V +++ +Y K G + AE+TFE+I+ G D
Sbjct: 359 YYKNEDYSKALSLLSEMENSKVIPDEVIYGILIRIYGKLGLYEEAEQTFEKIEKAGLLSD 418
Query: 240 KRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFE 299
+++Y +M ++ AG DR +L M + V Y A+LR Y + A+ F
Sbjct: 419 EQTYVAMAQVHLNAGDYDRALEVLESMMMRNVKPSHFSYSAILRCYVAKEDIVAAEDTFR 478
Query: 300 AIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKEN 359
A+ G+ PD C L+ Y G +KA MR+ + ++ K N
Sbjct: 479 ALSQHGL-PDVFCCNDLLRLYMRLGHLEKARALVLKMREDDFRLDEDLSMTVMKFYCKSN 537
Query: 360 QLNRALEFLIDLERD 374
+N A + D++R+
Sbjct: 538 MINDAEKIFKDIQRN 552
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 73/158 (46%)
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
T +M+ ++ K G L A E F + LG P+D++ Y +M+ Y +AG ++ + M
Sbjct: 749 TFNLMISVFGKGGKLDKAVEMFAAAQELGLPIDEKMYTNMLSLYGKAGRHQEASLMFKRM 808
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
+ G + +++ Y+ +G A+ F +Q G PD+ LI AY A
Sbjct: 809 KEDGIRPGKISFNSMINAYATSGLCSEAKSTFHEMQDCGHAPDSFSYLALIRAYTEAKLY 868
Query: 327 QKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
+A A + M + PS + ++ A KE Q+ A
Sbjct: 869 MEAEEAIRMMLNSSTTPSCPHFSHLIFAFLKEGQIGEA 906
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 5/182 (2%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT ++ YGK + Q A MK G +++ M+ Y+ +G A+ TF E++
Sbjct: 785 YTNMLSLYGKAGRHQEASLMFKRMKEDGIRPGKISFNSMINAYATSGLCSEAKSTFHEMQ 844
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D SY +++ AY A + E +R M + L+ + G
Sbjct: 845 DCGHAPDSFSYLALIRAYTEAKLYMEAEEAIRMMLNSSTTPSCPHFSHLIFAFLKEGQIG 904
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
AQR++ ++ A + PD C ++ Y G + T ++ R L+P + IL
Sbjct: 905 EAQRIYNQMKEASVAPDLACCRTMMRVYMEHGLMDEGITLYETTR-GSLKPD----SFIL 959
Query: 353 SA 354
SA
Sbjct: 960 SA 961
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 114/278 (41%), Gaps = 34/278 (12%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I + K+ ++ A + M++ F+ ++ T ++++ S+ G + A FEE+K
Sbjct: 282 YTVVISSFVKEDLLEKAMDVFGEMRQCRFVPEEATYSLLISASSRHGKGEQALRLFEEMK 341
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + S++ Y + + LL EM+ +V +Y L+R Y G E
Sbjct: 342 AQGIVPSNYTCASLLALYYKNEDYSKALSLLSEMENSKVIPDEVIYGILIRIYGKLGLYE 401
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A++ FE I+ AG+ D + + + AG +A ++M ++PS + IL
Sbjct: 402 EAEQTFEKIEKAGLLSDEQTYVAMAQVHLNAGDYDRALEVLESMMMRNVKPSHFSYSAIL 461
Query: 353 SA-CEKEN---------------------------------QLNRALEFLIDLERDGFMV 378
KE+ L +A ++ + D F +
Sbjct: 462 RCYVAKEDIVAAEDTFRALSQHGLPDVFCCNDLLRLYMRLGHLEKARALVLKMREDDFRL 521
Query: 379 GKEASCTLAAWFKRLGVVEEVEHVLREYGLRETYSKIP 416
++ S T+ ++ + ++ + E + ++ KIP
Sbjct: 522 DEDLSMTVMKFYCKSNMINDAEKIFKDIQRNNKTVKIP 559
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 107/244 (43%), Gaps = 4/244 (1%)
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL 221
L+ +E ++ YT ++ YGK +I+ AE T L M + G D V ++ MY++ G
Sbjct: 166 LQLCYEPSVVAYTILLRLYGKVGKIKLAEETFLEMLQVGCEPDAVACGTLLCMYARWGRH 225
Query: 222 KMAEETFEEIKL--LGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
K + ++ L P+ +Y M+ + + + + + ++M Y
Sbjct: 226 KDMMLFYSAVRRRDLVPPVSVYNY--MISSLQKQKLHGKVIHVWKQMREAGALPNQFTYT 283
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
++ + E A VF ++ P+ +LLI+A G+ ++A F+ M+
Sbjct: 284 VVISSFVKEDLLEKAMDVFGEMRQCRFVPEEATYSLLISASSRHGKGEQALRLFEEMKAQ 343
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEV 399
G+ PS+ A +L+ K ++AL L ++E + + L + +LG+ EE
Sbjct: 344 GIVPSNYTCASLLALYYKNEDYSKALSLLSEMENSKVIPDEVIYGILIRIYGKLGLYEEA 403
Query: 400 EHVL 403
E
Sbjct: 404 EQTF 407
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 77/179 (43%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+++ + +I +GK ++ A A + G D+ T M+ +Y KAG + A F
Sbjct: 746 SMQTFNLMISVFGKGGKLDKAVEMFAAAQELGLPIDEKMYTNMLSLYGKAGRHQEASLMF 805
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ +K G K S+ SM+ AY +G+ + EM S Y AL+R Y+
Sbjct: 806 KRMKEDGIRPGKISFNSMINAYATSGLCSEAKSTFHEMQDCGHAPDSFSYLALIRAYTEA 865
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
A+ + + TP + LI A+ GQ +A + M++A + P C
Sbjct: 866 KLYMEAEEAIRMMLNSSTTPSCPHFSHLIFAFLKEGQIGEAQRIYNQMKEASVAPDLAC 924
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M+ G + +Q T TV++ + K L+ A + F E++ ++ +Y ++ A R G
Sbjct: 270 MREAGALPNQFTYTVVISSFVKEDLLEKAMDVFGEMRQCRFVPEEATYSLLISASSRHGK 329
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
++ L EM AQ + + +LL Y N + A + ++ + + PD + +
Sbjct: 330 GEQALRLFEEMKAQGIVPSNYTCASLLALYYKNEDYSKALSLLSEMENSKVIPDEVIYGI 389
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFL 368
LI Y G ++A F+ + KAGL ++ + +RALE L
Sbjct: 390 LIRIYGKLGLYEEAEQTFEKIEKAGLLSDEQTYVAMAQVHLNAGDYDRALEVL 442
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 83/206 (40%), Gaps = 1/206 (0%)
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
GF D + +VV Y + L+ A+E FE L P Y +MV A+ + G +
Sbjct: 638 GFKPDHTAIATLVVQYGQGKQLEQAQELFESASALF-PEGANVYNAMVDAFCKCGKTEDA 696
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
L EM Q + L+ + +G A +++ + +G + + L+I+
Sbjct: 697 YHLFMEMVDQGSNRDAVTVSILVTHLTKHGKLHSAISIYDRMISSGTSQSMQTFNLMISV 756
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
+ G+ KA F ++ GL +K +LS K + A ++ DG G
Sbjct: 757 FGKGGKLDKAVEMFAAAQELGLPIDEKMYTNMLSLYGKAGRHQEASLMFKRMKEDGIRPG 816
Query: 380 KEASCTLAAWFKRLGVVEEVEHVLRE 405
K + ++ + G+ E + E
Sbjct: 817 KISFNSMINAYATSGLCSEAKSTFHE 842
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 96/231 (41%), Gaps = 1/231 (0%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRR-GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLL 234
I+HG+ K+ ++++A N + M + GF DQ T +V KAG++K A E + +
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324
Query: 235 GEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGA 294
G D +Y S++ + G + +L +M ++ + Y L+ E A
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384
Query: 295 QRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSA 354
+ + GI PD LI + + A F+ MR G EP + +++ +
Sbjct: 385 TELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDS 444
Query: 355 CEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ +L+ AL L +E G TL F + E E + E
Sbjct: 445 LCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDE 495
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 88/207 (42%), Gaps = 2/207 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G+ K + + AE M+ G + VT ++ K+ ++ A + +++
Sbjct: 473 YNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMI 532
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ G+ DK +Y S++ + R G + + +++ M + Y L+ G G E
Sbjct: 533 MEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVE 592
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A ++ +IQ GI +I ++ +A F+ M + P D I+
Sbjct: 593 VASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIV 652
Query: 353 --SACEKENQLNRALEFLIDLERDGFM 377
C + A++FL++L GF+
Sbjct: 653 FRGLCNGGGPIREAVDFLVELLEKGFV 679
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 75/169 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I K ++ A N L M+ G +T ++ + KA + AEE F+E++
Sbjct: 438 YNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEME 497
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ G + +Y +++ ++ ++ L+ +M + Y +LL + G+ +
Sbjct: 498 VHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIK 557
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
A + +A+ G PD LI+ AG+ + A ++++ G+
Sbjct: 558 KAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGI 606
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/273 (18%), Positives = 100/273 (36%), Gaps = 37/273 (13%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y +I K+ Q++ A + +G + D T ++ N ++A E F
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
EE++ G D+ +Y ++ + G LD +L++M+ Y L+ G+
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483
Query: 289 GNSEGAQRVFEAIQFAGIT-----------------------------------PDARMC 313
+ A+ +F+ ++ G++ PD
Sbjct: 484 NKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTY 543
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
L+ + G +KA Q M G EP ++S K ++ A + L ++
Sbjct: 544 NSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQM 603
Query: 374 DGFMVGKEA-SCTLAAWFKRLGVVEEVEHVLRE 405
G + A + + F++ E + ++ RE
Sbjct: 604 KGINLTPHAYNPVIQGLFRKRKTTEAI-NLFRE 635
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/201 (18%), Positives = 89/201 (44%), Gaps = 1/201 (0%)
Query: 211 MVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE 270
M+ + +LK+ E + ++ + G D ++ ++ A RA L ++L +M +
Sbjct: 160 MLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYG 219
Query: 271 VYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAY 330
+ + + +++GY G+ +GA R+ E + G + ++++ + G+ + A
Sbjct: 220 LVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDAL 279
Query: 331 TAFQNM-RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAW 389
Q M + G P +++ K + A+E + + ++G+ ++ +
Sbjct: 280 NFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISG 339
Query: 390 FKRLGVVEEVEHVLREYGLRE 410
+LG V+E VL + R+
Sbjct: 340 LCKLGEVKEAVEVLDQMITRD 360
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 106/236 (44%), Gaps = 3/236 (1%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F+ ++ ++ G K+ + + E M +R + ++ ++V K G L A
Sbjct: 116 FKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAG 175
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYV---RAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
+ E++K+ G + +Y +++ Y R G + + + +L+EM A+ + Y L+
Sbjct: 176 DVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILI 235
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G+ + N GA RVF +Q G+ P+ +LIN G+ +A M + LE
Sbjct: 236 DGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLE 295
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
P+ ++++ K +N A+ D+E+ G TL + + G +E+
Sbjct: 296 PNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMED 351
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 79/178 (44%), Gaps = 3/178 (1%)
Query: 169 NIRDYTKIIHGY---GKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
N+ Y +I GY G+ ++ A+ L M +G ++VT +++ + K N+ A
Sbjct: 189 NVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAM 248
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ G + +Y ++ G +D L +M + ++ + L+ G+
Sbjct: 249 RVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGF 308
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
N A +F ++ G+ P+A LI+AY G+ + A+ + M G+ P
Sbjct: 309 CKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFP 366
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 95/242 (39%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ N+ Y +I+G ++ A M + VT V++ + K +
Sbjct: 257 QGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNE 316
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F +++ G + +Y +++ AY + G ++ L M + ++ Y L+
Sbjct: 317 AINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIA 376
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G+ + A+ + + ++ D +LI++ G+S+KA M + GL P
Sbjct: 377 GLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNP 436
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
S ++ +E L AL +ER G L F G +E+ +L
Sbjct: 437 SHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLL 496
Query: 404 RE 405
E
Sbjct: 497 NE 498
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 73/182 (40%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
++ + N YT +I Y K ++++A M RG + T ++ + G++K
Sbjct: 326 KQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVK 385
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A E+ D +Y ++ + + G + LL EM + + Y L+
Sbjct: 386 AARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLM 445
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
GY GN A V ++ G + +LI + + G+ + A M + GL
Sbjct: 446 DGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLV 505
Query: 343 PS 344
P+
Sbjct: 506 PN 507
>gi|224119538|ref|XP_002318099.1| predicted protein [Populus trichocarpa]
gi|222858772|gb|EEE96319.1| predicted protein [Populus trichocarpa]
Length = 426
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 4/220 (1%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M+RRG + + ++ YSK+ ++ AE + E++ G ++ ++ AY R
Sbjct: 72 MERRGISSNAIIYNTLMDSYSKSNQIEEAEGLYSEMQAKGLKPTSATFNILMDAYSRRMQ 131
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN-SEGAQRVFEAIQFAGITPDARMCA 314
D E LL EM + ++ Y L+ Y S+ A F ++ AGI P +
Sbjct: 132 PDIIEKLLLEMQDAGLAPNAKSYTCLISAYGRQKKMSDMAADAFLRMKKAGIKPTSYSYT 191
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
LI+AY ++G +KAY F+NM++ G++PS + +L A + ++ + R+
Sbjct: 192 ALIHAYSVSGWHEKAYITFENMQREGIKPSIETYTTLLDAFRRAGDTKTLMDIWKLMMRE 251
Query: 375 GFMVGKEASCTLAAWFKRLGVVEEVEHVLRE---YGLRET 411
+ L F + G E V+ E +GL T
Sbjct: 252 KVEGTRVTFNILLDGFAKQGHYMEARDVINEFKKFGLHPT 291
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 118/260 (45%), Gaps = 27/260 (10%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRD 172
+ P + + L+ A+ R M+P ++++L L+E +Q A LA N +
Sbjct: 112 LKPTSATFNILMDAYSRRMQP------DIIEKL-LLE----MQDAGLA-------PNAKS 153
Query: 173 YTKIIHGYGKKMQIQN-AENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEI 231
YT +I YG++ ++ + A + L MK+ G + T ++ YS +G + A TFE +
Sbjct: 154 YTCLISAYGRQKKMSDMAADAFLRMKKAGIKPTSYSYTALIHAYSVSGWHEKAYITFENM 213
Query: 232 KLLGEPLDKRSYGSMVMAYVRAG----MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
+ G +Y +++ A+ RAG ++D ++++RE +V + LL G++
Sbjct: 214 QREGIKPSIETYTTLLDAFRRAGDTKTLMDIWKLMMRE----KVEGTRVTFNILLDGFAK 269
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G+ A+ V + G+ P +L+NAY GQ K + M LEP
Sbjct: 270 QGHYMEARDVINEFKKFGLHPTVMTYNMLMNAYARGGQDSKLPQLLKEMATLKLEPDSIT 329
Query: 348 VALILSACEKENQLNRALEF 367
++ A + RA +
Sbjct: 330 YTTMIYAYVRVRDFRRAFFY 349
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 99/234 (42%), Gaps = 1/234 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ Y K QI+ AE M+ +G T +++ YS+ + E+ E++
Sbjct: 84 YNTLMDSYSKSNQIEEAEGLYSEMQAKGLKPTSATFNILMDAYSRRMQPDIIEKLLLEMQ 143
Query: 233 LLGEPLDKRSYGSMVMAYVR-AGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
G + +SY ++ AY R M D M + S Y AL+ YS++G
Sbjct: 144 DAGLAPNAKSYTCLISAYGRQKKMSDMAADAFLRMKKAGIKPTSYSYTALIHAYSVSGWH 203
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALI 351
E A FE +Q GI P L++A++ AG ++ ++ M + +E + ++
Sbjct: 204 EKAYITFENMQREGIKPSIETYTTLLDAFRRAGDTKTLMDIWKLMMREKVEGTRVTFNIL 263
Query: 352 LSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
L K+ A + + + ++ G L + R G ++ +L+E
Sbjct: 264 LDGFAKQGHYMEARDVINEFKKFGLHPTVMTYNMLMNAYARGGQDSKLPQLLKE 317
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 82/180 (45%), Gaps = 8/180 (4%)
Query: 204 DQVTLTVMV-VMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVL 262
D VT +M+ VM K K A E FE + G G+++ ++ G+ ++
Sbjct: 9 DHVTCCIMITVMRKKGCTAKEAWEFFERMTRKGVKWSPEVLGALIKSFCDEGLKKEALII 68
Query: 263 LREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQM 322
EM+ + + + +Y L+ YS + E A+ ++ +Q G+ P + +L++AY
Sbjct: 69 QTEMERRGISSNAIIYNTLMDSYSKSNQIEEAEGLYSEMQAKGLKPTSATFNILMDAYSR 128
Query: 323 AGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEA 382
Q M+ AGL P+ K ++SA ++ +++ D+ D F+ K+A
Sbjct: 129 RMQPDIIEKLLLEMQDAGLAPNAKSYTCLISAYGRQKKMS-------DMAADAFLRMKKA 181
>gi|302784330|ref|XP_002973937.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
gi|300158269|gb|EFJ24892.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
Length = 823
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 125/319 (39%), Gaps = 40/319 (12%)
Query: 127 WVR---FMKPRRADWLAVLKQLKLMEH-PLYLQVAELALLEESFEANIRDYTKIIHGYGK 182
W+R K R ++L L E P L++ E +ES+ ++ YT +I +
Sbjct: 166 WIRKHDCFKLRGVATASILSVLGNHEQLPAALELFESLKQDESYSLDVYAYTSLISILSR 225
Query: 183 KMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN-LKMAEETFEEIKLLGEPLDKR 241
+ M+R G + VT VM+ +Y K G+ + F+E+K L D
Sbjct: 226 ARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQEMKDLEISPDDY 285
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI 301
+Y +M+ A ++ L +EM Y ALL Y G + A + +
Sbjct: 286 TYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEM 345
Query: 302 QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQL 361
+ AGI+P+ LI AY AG +A +++ GL P + ++SA + +
Sbjct: 346 EAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERY 405
Query: 362 NRALEFLIDLERDG---------------------------FMVGKEASCT--LAAW--- 389
+ALE ++ + F +E +CT L W
Sbjct: 406 EKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSL 465
Query: 390 ---FKRLGVVEEVEHVLRE 405
F G++ EV +V RE
Sbjct: 466 LKSFGNCGMLTEVSNVFRE 484
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/261 (19%), Positives = 110/261 (42%), Gaps = 18/261 (6%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRD 172
+SP ++L+AA+ R D A LK+ +LL + +
Sbjct: 350 ISPNIVTYNELIAAYAR---AGLCDEAAALKK---------------SLLSKGLCPDEFT 391
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I + + + + A T M++ + VT +++ +Y + L + F+ ++
Sbjct: 392 YCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQ 451
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
D ++ S++ ++ GML + REM G + + L+ Y G +
Sbjct: 452 EKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVD 511
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
+ +++ + G+ P A L+ + G+ Q+ Q M +AGL+ SD C A ++
Sbjct: 512 YSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLI 571
Query: 353 SACEKENQLNRALEFLIDLER 373
+ Q + +++ +LE+
Sbjct: 572 HSYANSGQFFQLRKYIDELEK 592
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 71/169 (42%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
+ Y K A+ L + G D M+ M +K G ++ A + EEI+
Sbjct: 606 FVLAYCKCGMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQ 665
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
D +Y ++ Y R GM + E ++ EM Y LL Y+ +G + A
Sbjct: 666 LKPDGVTYNCLMSMYGREGMYYKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAA 725
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
RVF + A + PD L+ +Y G ++A + + M + G +P+
Sbjct: 726 RVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPT 774
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 99/251 (39%), Gaps = 4/251 (1%)
Query: 159 LALLEESFEA----NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
L L +E EA N Y ++ YGK + A L+ M+ G + VT ++
Sbjct: 304 LRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAA 363
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
Y++AG A + + G D+ +Y +++ A+ RA ++ EM
Sbjct: 364 YARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPN 423
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
Y L+ Y + +VF+ +Q TPD L+ ++ G + F+
Sbjct: 424 IVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFR 483
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
M++AG P +++ + ++ +++ L R G L A R G
Sbjct: 484 EMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREG 543
Query: 395 VVEEVEHVLRE 405
++ E V +E
Sbjct: 544 RWQQCEKVSQE 554
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 72/167 (43%)
Query: 155 QVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
Q+A L + +I+ + +I K+ I+ A L +++ D VT ++ M
Sbjct: 620 QLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSM 679
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
Y + G AEE E++ G+ + +Y +++ +Y + G +D + +M A V
Sbjct: 680 YGREGMYYKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPD 739
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQ 321
+ + L+ YS G + A V E + G P L++ Y
Sbjct: 740 NFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQITFKALLDGYN 786
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 102/261 (39%), Gaps = 14/261 (5%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
LL + + + ++ ++ + Q E M G ++ Y+ +G
Sbjct: 519 GLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSG 578
Query: 220 NLKMAEETFEEI-KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
+ +E+ K +PL + V+AY + GM + ++ L ++ +V+
Sbjct: 579 QFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCGMDNEAQLALNQLYDNGHSPDIKVF 638
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
A++ + G E A ++ E I+ A + PD L++ Y G KA MR+
Sbjct: 639 NAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYYKAEEVMSEMRR 698
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDL-----ERDGFMVGKEASCTLAAWFKRL 393
AG P+ +L + K +++ A D+ D F TL + L
Sbjct: 699 AGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFN-----TLVGSYSSL 753
Query: 394 GVVEEVEHVLR---EYGLRET 411
G+ +E V+ E+G + T
Sbjct: 754 GLYKEALSVIEYMTEHGCQPT 774
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 65/153 (42%), Gaps = 11/153 (7%)
Query: 161 LLEESFEANIR----DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS 216
LLEE +A ++ Y ++ YG++ AE + M+R G + +T ++ Y+
Sbjct: 657 LLEEIRKAQLKPDGVTYNCLMSMYGREGMYYKAEEVMSEMRRAGKAPNLITYNTLLYSYT 716
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
K G + A F ++ D ++ ++V +Y G+ ++ M
Sbjct: 717 KHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQI 776
Query: 277 VYKALLRGYSMNGN-------SEGAQRVFEAIQ 302
+KALL GY+ N + +G R E I+
Sbjct: 777 TFKALLDGYNRNASPSRKKPGGDGGGRPIEMIK 809
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 38/208 (18%), Positives = 85/208 (40%), Gaps = 3/208 (1%)
Query: 170 IRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFE 229
+ + +I YG+ + + + + R G T ++ ++ G + E+ +
Sbjct: 494 VDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQ 553
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMD--AQEVYVGSEVYKALLRGYSM 287
E+ G L + ++ +Y +G + + E++ A++ G + K + Y
Sbjct: 554 EMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGI-LCKTFVLAYCK 612
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G AQ + G +PD ++ +I+ G ++A + +RKA L+P
Sbjct: 613 CGMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVT 672
Query: 348 VALILSACEKENQLNRALEFLIDLERDG 375
++S +E +A E + ++ R G
Sbjct: 673 YNCLMSMYGREGMYYKAEEVMSEMRRAG 700
>gi|255660920|gb|ACU25629.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
Length = 484
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 117/266 (43%), Gaps = 4/266 (1%)
Query: 141 VLKQLKLMEHPL-YLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR 199
VL K EH L + + E + L FE N + KII G+ ++ +A LL M ++
Sbjct: 18 VLHGSKTSEHALQFFRWVERSNL---FEHNRETHLKIIEILGRASKLNHARCILLDMPKK 74
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G D+ +M+ Y K G ++ + + F++++ LG +SY ++ +R G
Sbjct: 75 GLEWDEDMWVLMIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRFMMA 134
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+ +M ++ + + ++ G+ ++G E A R FE ++ I+PD +IN
Sbjct: 135 KRYFNKMLSEGIEPTRHXFNVMIWGFFLSGKVETANRFFEDMKSREISPDVITYNTMING 194
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
Y + +A F M+ +EP+ ++ +Q++ AL + +++ G
Sbjct: 195 YYRVKKMDEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPN 254
Query: 380 KEASCTLAAWFKRLGVVEEVEHVLRE 405
TL + E +L+E
Sbjct: 255 AITYSTLLPGLCNAEKMSEARSILKE 280
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 86/202 (42%), Gaps = 8/202 (3%)
Query: 163 EESFEANIRDYT---KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
E E I+ Y K+I G+ M + N +L+ G + VM+ + +G
Sbjct: 108 ELGVERTIKSYDALFKVILRRGRFMMAKRYFNKMLS---EGIEPTRHXFNVMIWGFFLSG 164
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A FE++K D +Y +M+ Y R +D E EM + + Y
Sbjct: 165 KVETANRFFEDMKSREISPDVITYNTMINGYYRVKKMDEAEKYFVEMKGRNIEPTVVTYT 224
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L++GY + A R+ E ++ GI P+A + L+ A + +A + + M
Sbjct: 225 TLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDK 284
Query: 340 GLEPSDKCV--ALILSACEKEN 359
+ P+D + LI S C+ N
Sbjct: 285 YMAPTDNSIFXRLISSQCKTGN 306
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 69/162 (42%), Gaps = 1/162 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y +I+GY + ++ AE + MK R VT T ++ Y + A
Sbjct: 184 DVITYNTMINGYYRVKKMDEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLV 243
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM-DAQEVYVGSEVYKALLRGYSM 287
EE+K G + +Y +++ A + +L+EM D + ++ L+
Sbjct: 244 EEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYMAPTDNSIFXRLISSQCK 303
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
GN + A V +A+ + +A +LI + AGQ KA
Sbjct: 304 TGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQHDKA 345
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 119/265 (44%), Gaps = 18/265 (6%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L+ NI YT + G K ++ A L M R+G + T +V KAGN
Sbjct: 354 MLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGN 413
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + +++++ G D +Y +++ AY ++ + R LLR+M +E+ +
Sbjct: 414 IDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNV 473
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G+ M+G E +++ + + GI P+A LI Y + + ++ M G
Sbjct: 474 LMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKG 533
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAW-------FKRL 393
+ P +++ K + A L RD MVGK + T++++ +KR
Sbjct: 534 VVPDGNTYNILIKGHCKARNMKEAWF----LHRD--MVGKGFNLTVSSYNALIKGFYKRK 587
Query: 394 GVVE--EVEHVLREYGL---RETYS 413
+E E+ +R GL RE Y+
Sbjct: 588 KFLEARELFEQMRREGLVADREIYN 612
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 80/172 (46%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I G + ++ A+ M + D+VT T ++ Y K G +K A ++
Sbjct: 296 YTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQML 355
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+G + +Y ++ + G +D LL EM + + + Y +L+ G GN +
Sbjct: 356 QMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNID 415
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A ++ + ++ AG PDA L++AY + + +A+ + M L+P+
Sbjct: 416 QAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPT 467
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 92/222 (41%), Gaps = 4/222 (1%)
Query: 159 LALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
L L+EE + N Y +I K ++ AE L M G D V T ++
Sbjct: 208 LKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDG 267
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
+ K GN+ A F+E++ D +Y +++ + G + + L EM + +
Sbjct: 268 FCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPD 327
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
Y AL+ GY G + A + + G+TP+ L + G+ A
Sbjct: 328 EVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLH 387
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
M + GLE + +++ K +++A++ + D+E GF
Sbjct: 388 EMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGF 429
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 74/177 (41%)
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
EE+++ G + +Y +++ + G + E +LREM ++ + +Y L+ G+
Sbjct: 212 EEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKL 271
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
GN A R+F+ +Q I+PD +I G+ +A F M LEP +
Sbjct: 272 GNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTY 331
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ KE ++ A + + G LA + G V+ +L E
Sbjct: 332 TALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHE 388
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 116/252 (46%), Gaps = 18/252 (7%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRD 172
+SP S L+ ++V+ K R AD L LK++ ++ N
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQL--LKEM----------------MQRGIAPNTIT 370
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G+ K+ +++ A + M +G D +T +++ Y KA + E F E+
Sbjct: 371 YNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMS 430
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
L G + +Y ++V + ++G L+ + L +EM ++ V YK LL G NG E
Sbjct: 431 LRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELE 490
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +F I+ + + D + ++I+ A + A+ F ++ G++ + +++
Sbjct: 491 KALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMI 550
Query: 353 SACEKENQLNRA 364
S +++ L++A
Sbjct: 551 SELCRKDSLSKA 562
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 105/245 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E F+ N Y +++ K Q A L M+ R D V ++++ K G+
Sbjct: 219 MVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGS 278
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A F E+++ G D +Y +++ + AG D G LLR+M +++ +
Sbjct: 279 LDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSV 338
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ + G A ++ + + GI P+ LI+ + + ++A M G
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+P ++++ K N+++ LE ++ G + TL F + G +E +
Sbjct: 399 CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAK 458
Query: 401 HVLRE 405
+ +E
Sbjct: 459 KLFQE 463
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 88/182 (48%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ N+ ++ +I + K+ +++ A+ L M +RG + +T ++ + K
Sbjct: 324 MIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENR 383
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ A + + + G D ++ ++ Y +A +D G L REM + V + Y
Sbjct: 384 LEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNT 443
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L++G+ +G E A+++F+ + + PD +L++ G+ +KA F + K+
Sbjct: 444 LVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSK 503
Query: 341 LE 342
+E
Sbjct: 504 ME 505
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 89/196 (45%), Gaps = 1/196 (0%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
+++G ++ +A + M GF ++VT ++ + K+G +A E +++
Sbjct: 199 LVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERN 258
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
LD Y ++ + G LD L EM+ + Y L+ G+ G +
Sbjct: 259 IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGA 318
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
++ + I+P+ ++LI+++ G+ ++A + M + G+ P+ ++
Sbjct: 319 KLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGF 378
Query: 356 EKENQLNRALEFLIDL 371
KEN+L A++ ++DL
Sbjct: 379 CKENRLEEAIQ-MVDL 393
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 211 MVVMYS--KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
M++++ A + A + F + L G LD R+Y M+ R L + ++L R+M
Sbjct: 512 MIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKM-T 570
Query: 269 QEVYVGSEV-YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQ 327
+E + E+ Y L+R + + ++ A + E ++ +G D ++IN +G+
Sbjct: 571 EEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLS-SGELD 629
Query: 328 KAYTAFQNMRKAGLE 342
K++ + +A L+
Sbjct: 630 KSFLDMLSTTRASLK 644
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 38/216 (17%), Positives = 93/216 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ +E + + +++G + ++ A + M G +TL +V G
Sbjct: 149 IMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGK 208
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + + G ++ +YG ++ ++G LLR+M+ + + + + Y
Sbjct: 209 VSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 268
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G +G+ + A +F ++ G D LI + AG+ ++M K
Sbjct: 269 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+ P+ ++++ + KE +L A + L ++ + G
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI 364
>gi|242056929|ref|XP_002457610.1| hypothetical protein SORBIDRAFT_03g010260 [Sorghum bicolor]
gi|241929585|gb|EES02730.1| hypothetical protein SORBIDRAFT_03g010260 [Sorghum bicolor]
Length = 1089
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 104/221 (47%), Gaps = 6/221 (2%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ YT ++ G+ K+ ++++A + + +++ G + D+ ++++ K +L A
Sbjct: 309 NLITYTSLVGGFCKRDRLEDAFSIVRKLEQTGVVVDEYVYSILIDSLCKMEDLDRAFSLL 368
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++ G +Y +++ +AG ++ + ++ V + Y LL GY
Sbjct: 369 TEMENKGIKASIITYNAIINGLCKAGHTEKALEI-----SEGVAADNFTYSTLLHGYINR 423
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G+ G + + ++ +GI+ D C +LI A M + A++ F M + GL P+
Sbjct: 424 GDITGVMAIKDRLEGSGISIDVVTCNVLIKASFMINKVNDAWSLFHKMPEMGLRPNTITY 483
Query: 349 ALILSACEKENQLNRALEFLIDLERD-GFMVGKEASCTLAA 388
I+ K ++++ALE + ++D GF C + A
Sbjct: 484 HTIIDKLCKAEEVDKALELFDEYKKDSGFSTAVVHECLIKA 524
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 95/209 (45%), Gaps = 5/209 (2%)
Query: 135 RADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLL 194
R A+ KQ ++++ +L++AE +S ++ Y+ ++ G K ++ A +
Sbjct: 691 RGAVFALKKQGEVLDACNFLKIAE-----QSGLVDLAMYSIVVDGLCKGGYLEKALDLCE 745
Query: 195 AMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG 254
+MK+ GF + + ++ G L A F+ ++ +Y ++ A R G
Sbjct: 746 SMKKEGFHPNIIIHNSVLSGLCHQGCLTEAFRLFDYLENSNMLPTIITYTILIGALCREG 805
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
+LD + L ++M + + + VY L+ GY G +E A + ++ + PD
Sbjct: 806 LLDDADQLFQKMSTKGIKPTTRVYNLLISGYCNFGLTEKALELMSHLEELFLLPDCFTLG 865
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
+IN + G+++ A + F R +EP
Sbjct: 866 AIINGLCLKGETEAALSFFNEYRHRDMEP 894
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 85/208 (40%), Gaps = 2/208 (0%)
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRR--GFICDQVTLTVMVVMYSKAGNLKMAEETF 228
R + II G+ + + + +KR+ GF VTLT +V G E
Sbjct: 169 RVCSSIISGFSRTGKAGAGLDFYEKVKRQFSGFDPGLVTLTSVVHALGLEGRTGEVAELM 228
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E++ G D YGSMV Y+ G L G R M + + + Y ++ G
Sbjct: 229 QEMECKGMNADAVFYGSMVHGYMSRGFLMEGLREHRSMLEKGITADAINYTTVIDGLCRE 288
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G+ E + ++ P+ L+ + + + A++ + + + G+ +
Sbjct: 289 GSVEKVMGFLDEMEQVDAKPNLITYTSLVGGFCKRDRLEDAFSIVRKLEQTGVVVDEYVY 348
Query: 349 ALILSACEKENQLNRALEFLIDLERDGF 376
++++ + K L+RA L ++E G
Sbjct: 349 SILIDSLCKMEDLDRAFSLLTEMENKGI 376
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 41/211 (19%), Positives = 81/211 (38%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F+ + T ++H G + + + M+ +G D V MV Y G L
Sbjct: 201 FDPGLVTLTSVVHALGLEGRTGEVAELMQEMECKGMNADAVFYGSMVHGYMSRGFLMEGL 260
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+ G D +Y +++ R G +++ L EM+ + Y +L+ G+
Sbjct: 261 REHRSMLEKGITADAINYTTVIDGLCREGSVEKVMGFLDEMEQVDAKPNLITYTSLVGGF 320
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
E A + ++ G+ D + ++LI++ +A++ M G++ S
Sbjct: 321 CKRDRLEDAFSIVRKLEQTGVVVDEYVYSILIDSLCKMEDLDRAFSLLTEMENKGIKASI 380
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGF 376
I++ K +ALE + D F
Sbjct: 381 ITYNAIINGLCKAGHTEKALEISEGVAADNF 411
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 95/231 (41%), Gaps = 15/231 (6%)
Query: 182 KKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKR 241
K+ ++ +A N L ++ G + D +++V K G L+ A + E +K G +
Sbjct: 699 KQGEVLDACNFLKIAEQSGLV-DLAMYSIVVDGLCKGGYLEKALDLCESMKKEGFHPNII 757
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI 301
+ S++ G L L ++ + Y L+ G + A ++F+ +
Sbjct: 758 IHNSVLSGLCHQGCLTEAFRLFDYLENSNMLPTIITYTILIGALCREGLLDDADQLFQKM 817
Query: 302 QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQL 361
GI P R+ LLI+ Y G ++KA ++ + L P + I++ + +
Sbjct: 818 STKGIKPTTRVYNLLISGYCNFGLTEKALELMSHLEELFLLPDCFTLGAIINGLCLKGET 877
Query: 362 NRALEFLI-----DLERD--GFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
AL F D+E D GFM +L G +EE +LRE
Sbjct: 878 EAALSFFNEYRHRDMEPDFVGFM-------SLVKGLYAKGRMEESRGILRE 921
>gi|255660938|gb|ACU25638.1| pentatricopeptide repeat-containing protein [Citharexylum
montevidense]
Length = 481
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 85/179 (47%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
FE N + KII G+ ++ +A LL M ++G D+ +M+ Y KAG ++ +
Sbjct: 41 FEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLQWDEDLWVLMIDSYGKAGIVQESV 100
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+ F +++ LG +SY + +R G + +M ++ + + ++ G+
Sbjct: 101 KLFHKMEELGVERTIKSYDVLFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNIMIWGF 160
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
++G E A R FE ++ ITPD +IN Y + ++A F M+ +EP+
Sbjct: 161 FLSGKVETAXRFFEDMKSRDITPDVITYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPT 219
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 90/210 (42%), Gaps = 7/210 (3%)
Query: 163 EESFEANIRDYT---KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
E E I+ Y K+I G+ M + N +L+ G + T +M+ + +G
Sbjct: 108 ELGVERTIKSYDVLFKVILRRGRYMMAKRYFNKMLS---EGIEPTRHTFNIMIWGFFLSG 164
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A FE++K D +Y +M+ Y R ++ E EM + + +
Sbjct: 165 KVETAXRFFEDMKSRDITPDVITYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTHT 224
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L++GY + A R+ E ++ GI P+A + + A + +A + + M
Sbjct: 225 TLIKGYVAVDRVDDALRLVEEMKGFGIKPNAITYSTXLPGLCNAEKMSEARSXLKEMVDK 284
Query: 340 GLEPSDKCVAL-ILSACEKENQLNRALEFL 368
+ P+D + L ++S K L+ A + L
Sbjct: 285 YIAPTDNSIFLRLISGQCKAGNLDAAADVL 314
>gi|255660894|gb|ACU25616.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 481
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 112/243 (46%), Gaps = 6/243 (2%)
Query: 141 VLKQLKLMEHPL-YLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR 199
VL K EH L + + E + L FE N + KII G+ ++ +A LL M ++
Sbjct: 18 VLHSSKTSEHALQFFRWVERSNL---FEHNRETHLKIIEILGRASKLNHARCILLDMPKK 74
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G D+ +M+ Y K G ++ + + F++++ LG +SY ++ +R G
Sbjct: 75 GLEWDEDMWVMMIDSYGKQGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMA 134
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+ +M ++ + + ++ G+ ++G E R FE ++ I+PD +IN
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETXNRFFEDMKSREISPDVVTYNTMING 194
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
Y + ++A F M+ +EP+ ++ +Q++ AL + +++ GF +
Sbjct: 195 YYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK--GFGIK 252
Query: 380 KEA 382
A
Sbjct: 253 PNA 255
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 8/202 (3%)
Query: 163 EESFEANIRDYT---KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
E E I+ Y K+I G+ M + N +L+ G + T VM+ + +G
Sbjct: 108 ELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLS---EGIEPTRHTFNVMIWGFFLSG 164
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ FE++K D +Y +M+ Y R ++ E EM + + Y
Sbjct: 165 KVETXNRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYT 224
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L++GY + A R+ E ++ GI P+A + L+ A + +A + M
Sbjct: 225 TLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDK 284
Query: 340 GLEPSDKCV--ALILSACEKEN 359
L P+D + LI S C+ N
Sbjct: 285 YLAPTDNSIFMRLISSHCKSGN 306
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 72/162 (44%), Gaps = 1/162 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y +I+GY + +++ AE + MK R VT T ++ Y + A
Sbjct: 184 DVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLV 243
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM-DAQEVYVGSEVYKALLRGYSM 287
EE+K G + +Y +++ A + V+L+EM D + ++ L+ +
Sbjct: 244 EEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCK 303
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
+GN + A V +A+ + +A +LI + GQ KA
Sbjct: 304 SGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKVGQYDKA 345
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 94/207 (45%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I+G ++ Q++ L M +R ++ D+VT ++ Y GN A
Sbjct: 272 NLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLH 331
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E+ G + +Y +++ + +AG L+R L +M + ++ Y L+ G+S
Sbjct: 332 AEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQ 391
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A ++ + + G TP LIN + + G+ + A Q M + G P
Sbjct: 392 GFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSY 451
Query: 349 ALILSACEKENQLNRALEFLIDLERDG 375
+ I+S + +L +A + +++ G
Sbjct: 452 STIISGFCRNQELEKAFQLKVEMVAKG 478
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 91/223 (40%)
Query: 183 KMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRS 242
K ++ AE M G + T +++ + AGNL+M F E++ G + +
Sbjct: 181 KQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVT 240
Query: 243 YGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQ 302
Y +++ AY + + LLR M + + Y ++ G G + + E +
Sbjct: 241 YNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMS 300
Query: 303 FAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLN 362
PD LIN Y G +A M K GL P+ ++++ K LN
Sbjct: 301 KRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLN 360
Query: 363 RALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
RA+EFL + G TL F + G +++ +++E
Sbjct: 361 RAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKE 403
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 101/248 (40%), Gaps = 6/248 (2%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E N+ Y +I G+ ++ M+R G + + VT ++ Y K
Sbjct: 194 MVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCK--- 250
Query: 221 LKMAEETFEEIKLL---GEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
L+ E F+ ++L+ G + SY ++ R G + +L EM +
Sbjct: 251 LRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVT 310
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
+ L+ GY GN A + + G++P+ LIN+ AG +A MR
Sbjct: 311 FNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMR 370
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
GL P+ + ++ ++ L +A + + ++ +GF L LG +E
Sbjct: 371 DRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRME 430
Query: 398 EVEHVLRE 405
+ +L+E
Sbjct: 431 DASGLLQE 438
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 87/209 (41%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+ N R YT +I G+ ++ ++ A + M GF +T ++ + G ++
Sbjct: 371 DRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRME 430
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A +E+ G D SY +++ + R L++ L EM A+ + Y +L+
Sbjct: 431 DASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLI 490
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
+G +F+ + G+ PD LINAY + G KA M + G
Sbjct: 491 QGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFS 550
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDL 371
P ++++ K+++ A L+ L
Sbjct: 551 PDIVTYNVLINGFNKQSRTKEAKRLLLKL 579
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 118/265 (44%), Gaps = 25/265 (9%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E F I Y +I+G+ ++++A L M RGFI D V+ + ++ + +
Sbjct: 404 MVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQE 463
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEV--LLREMDAQEVYVGSEVY 278
L+ A + E+ G D +Y S++ + L GEV L +EM + + Y
Sbjct: 464 LEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRL--GEVCDLFQEMLSLGLPPDEVTY 521
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
+L+ Y + G+ + A R+ + + G +PD +LIN + ++++A +
Sbjct: 522 TSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLY 581
Query: 339 AGLEPS--------DKC--------VALILSACEKE--NQLNRALEFLIDLERDGFMVGK 380
P+ D C +AL+ C K N+ +R LE ++ + G+ + +
Sbjct: 582 EESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESML---QKGYKLNE 638
Query: 381 EASCTLAAWFKRLGVVEEVEHVLRE 405
E + ++G +E+ ++ +E
Sbjct: 639 EVYNVIIHGHSKVGNIEKAYNLYKE 663
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 107/262 (40%), Gaps = 53/262 (20%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E F ++ Y+ II G+ + +++ A + M +G D T + ++ K
Sbjct: 439 MIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRR 498
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG-------------------EV 261
L + F+E+ LG P D+ +Y S++ AY G LD+ V
Sbjct: 499 LGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNV 558
Query: 262 LLREMDAQ---------------EVYVGSEV-------------YK---ALLRGYSMNGN 290
L+ + Q E V +E+ +K AL++G+ M G
Sbjct: 559 LINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGL 618
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
A RV E++ G + + ++I+ + G +KAY ++ M +G P +
Sbjct: 619 MNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMA 678
Query: 351 ILSACE---KENQLNRALEFLI 369
+ + KE +LN+ L++ +
Sbjct: 679 LAKSLYHEGKEVELNQLLDYTL 700
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 93/216 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ N+ YT +I+ K + A L M+ RG + T T ++ +S+ G
Sbjct: 334 MVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGF 393
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
LK A + +E+ G +Y +++ + G ++ LL+EM + Y
Sbjct: 394 LKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYST 453
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G+ N E A ++ + GI+PD + LI + + FQ M G
Sbjct: 454 IISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLG 513
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
L P + +++A E L++AL ++ + GF
Sbjct: 514 LPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGF 549
>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
Length = 676
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 99/211 (46%), Gaps = 2/211 (0%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
E F NI Y II G+ KK +IQ A L +G D+VT T+++ + K G++
Sbjct: 386 EGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITC 445
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A + F+++ D +Y +++ Y + +++ + L + + + + Y +++
Sbjct: 446 ALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIA 505
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
GY G A +VFE + G PD+ LI++ + ++A F+ M L P
Sbjct: 506 GYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSLCKESRLEEARALFETMLDKHLVP 565
Query: 344 SDKC-VALILSACEKENQLNRALEFLIDLER 373
D V L C ++ ++ A+ FL L++
Sbjct: 566 CDVTRVTLAYEYCRRD-KITIAVSFLDRLDK 595
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 102/235 (43%), Gaps = 1/235 (0%)
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
R + ++ G ++ + + A+ L AM +GF D T TV+V + + G + + F
Sbjct: 182 RSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFRR 241
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
+ +G P + +Y + + G + + +L EM + + + +L+ G G
Sbjct: 242 MSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGW 301
Query: 291 SEGAQRVF-EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
E A R+F + ++ + P+ ++I Y G+ +A M + GL P+
Sbjct: 302 MERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYT 361
Query: 350 LILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
++ K +RA E + ++ +GF+ + F + G ++E VLR
Sbjct: 362 TLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLR 416
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 86/204 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E+ N YT +IHG+ K A + MK GF+ + T ++ + K G
Sbjct: 348 MVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGK 407
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ A + G LDK +Y ++ + + G + L ++M + + Y
Sbjct: 408 IQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTT 467
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ Y E +Q++F+ G+ P + +I Y G+ A F+ M + G
Sbjct: 468 IIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHG 527
Query: 341 LEPSDKCVALILSACEKENQLNRA 364
P ++S+ KE++L A
Sbjct: 528 CLPDSITYGALISSLCKESRLEEA 551
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 93/213 (43%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
S++ N+ YT +I GY K+ ++ AE L M +G + T T ++ + K G+
Sbjct: 315 SSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFD 374
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A E ++KL G + +Y +++ + + G + +LR +Q +++ Y L+
Sbjct: 375 RAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILI 434
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
+ G+ A +F+ + PD +I Y Q +++ F GL
Sbjct: 435 TEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLV 494
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDG 375
P+ + +++ + +L AL+ + + G
Sbjct: 495 PTKQTYTSMIAGYCRLGKLTSALKVFERMVQHG 527
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 77/194 (39%), Gaps = 1/194 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAM-KRRGFICDQVTLTVMVVMYSKAG 219
++ + + N+ +T +I G K ++ A L + K + + T TVM+ Y K G
Sbjct: 277 MVGKGLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEG 336
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
L AE + G + +Y +++ + + G DR L+ +M + Y
Sbjct: 337 KLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYN 396
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
A++ G+ G + A +V G+ D +LI + G A F+ M +
Sbjct: 397 AIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEK 456
Query: 340 GLEPSDKCVALILS 353
P I++
Sbjct: 457 SCHPDIHTYTTIIA 470
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 93/208 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++++ E N+ Y +IHG ++ A M+R G + + T ++++ ++K+G+
Sbjct: 340 MIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGD 399
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A ET+ + G + +Y MV + M D+ L+ +M + + +
Sbjct: 400 LVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNT 459
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++G NG E A ++ E +Q G P+ L++A + ++A+ FQ +
Sbjct: 460 FIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARN 519
Query: 341 LEPSDKCVALILSACEKENQLNRALEFL 368
L+P+ +L + + AL+
Sbjct: 520 LQPNLVTYNTVLYGFSRAGMMGEALQLF 547
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 95/233 (40%), Gaps = 5/233 (2%)
Query: 170 IRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFE 229
+R Y ++ + + Q MK+ G I + T +++ K + A + F
Sbjct: 144 VRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFV 203
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
E+ G P D +Y +MV + +AG +D RE+ A VY AL+ G G
Sbjct: 204 EMSNKGCPPDAVTYTTMVSSLCKAGKIDDA----REL-AGRFKPSVPVYNALIDGMCKEG 258
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
E A ++ + G+ P+ + +IN+ ++G + A+ F M G + +
Sbjct: 259 RIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFT 318
Query: 350 LILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
++ C +L AL+ + +DG A TL G +EE V
Sbjct: 319 PLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQV 371
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 99/256 (38%), Gaps = 11/256 (4%)
Query: 140 AVLKQLKL-MEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKR 198
A+L + K M +PLY + + L+ F NI ++ K ++ A + M
Sbjct: 153 ALLSENKFQMINPLYTNMKKDGLIPNVFTYNI-----LLKALCKNDRVDAAHKLFVEMSN 207
Query: 199 RGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDR 258
+G D VT T MV KAG + A E K P+ Y +++ + G ++
Sbjct: 208 KGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKP-SVPV----YNALIDGMCKEGRIEV 262
Query: 259 GEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLIN 318
LL EM V Y ++ ++GN E A +F + G + LI
Sbjct: 263 AIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIK 322
Query: 319 AYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMV 378
M G+ +A ++ M + G EP+ ++ L AL+ ++R G +
Sbjct: 323 GCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLP 382
Query: 379 GKEASCTLAAWFKRLG 394
L F + G
Sbjct: 383 NVTTYSILIDGFAKSG 398
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 42/213 (19%), Positives = 81/213 (38%), Gaps = 7/213 (3%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+F+ Y +I G++ ++ + L MK G C + ++ Y + G+ +
Sbjct: 68 NAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQ 127
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A + F I G R Y ++ A + L M + Y LL+
Sbjct: 128 ALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLK 187
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG-LE 342
N + A ++F + G PDA ++++ AG+ A AG +
Sbjct: 188 ALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDA------RELAGRFK 241
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDG 375
PS ++ KE ++ A++ L ++ +G
Sbjct: 242 PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNG 274
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 33/169 (19%), Positives = 67/169 (39%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ N+ YT ++ K A + + M G + +T + G
Sbjct: 410 MISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGR 469
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ A + E ++ G + +Y ++ A R + L +E++A+ + Y
Sbjct: 470 VEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNT 529
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
+L G+S G A ++F G PD+ +I+AY G+ + A
Sbjct: 530 VLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIA 578
>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Glycine max]
Length = 615
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 106/257 (41%), Gaps = 11/257 (4%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
LYL+V L+ + I + ++HG+ K + NA + +RG V+ +
Sbjct: 235 LYLEV-----LDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTL 289
Query: 212 VVMYSKAGNLKMAEETFEEIKLL---GEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
+ K+G++ EE F ++ G D ++ +++ + G LD G +L EM
Sbjct: 290 ISGCCKSGDV---EEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCG 346
Query: 269 QEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
+ + + L+ G G + A + F+ + G+ PD LIN G ++
Sbjct: 347 RGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKE 406
Query: 329 AYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAA 388
A M +GL+P ++ C K+ + ALE + +G + A L +
Sbjct: 407 ARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALIS 466
Query: 389 WFKRLGVVEEVEHVLRE 405
R G V + +L +
Sbjct: 467 GLCREGRVHDAGRMLTD 483
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 90/217 (41%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E ++ ++ +I+G K+ ++ M RG + + VT T ++ K G +
Sbjct: 311 SEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVD 370
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
+A + F+ + G D +Y +++ + G L L+ EM A + + L+
Sbjct: 371 LALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLI 430
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G +G+ E A + + GI D LI+ G+ A +M AG +
Sbjct: 431 DGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFK 490
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
P D +++ K+ + + L +++ DG + G
Sbjct: 491 PDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPG 527
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 64/131 (48%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++EE E + +T +I G ++ ++ +A L M GF D T T+++ + K G+
Sbjct: 449 MVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGD 508
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+KM + +E++ G +Y +++ + G + ++LL M V Y
Sbjct: 509 VKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNI 568
Query: 281 LLRGYSMNGNS 291
LL G+S +G+S
Sbjct: 569 LLDGHSKHGSS 579
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 69/158 (43%), Gaps = 8/158 (5%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRR----GFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+T +I G K +++A L +KRR G D V T ++ + G + A
Sbjct: 426 FTTLIDGCCKDGDMESA----LEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRML 481
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ G D +Y ++ + + G + G LL+EM + G Y AL+ G
Sbjct: 482 TDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQ 541
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
G + A+ + +A+ G+ P+ +L++ + G S
Sbjct: 542 GQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHGSS 579
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/200 (19%), Positives = 79/200 (39%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + ++ Y +I+G K ++ A + M G D++T T ++ K G+
Sbjct: 379 MLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGD 438
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ A E + G LD ++ +++ R G + +L +M + Y
Sbjct: 439 MESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTM 498
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ + G+ + ++ + +Q G P L+N GQ + A M G
Sbjct: 499 VIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVG 558
Query: 341 LEPSDKCVALILSACEKENQ 360
+ P+D ++L K
Sbjct: 559 VAPNDITYNILLDGHSKHGS 578
>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
Length = 789
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 108/260 (41%), Gaps = 19/260 (7%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N++ Y+ +I G + ++A+ M++ G VT ++ K G L+ A F
Sbjct: 405 NVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLF 464
Query: 229 EEIKLLGEP-------------LDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
++++ P LD S MV +G++ + +L ++ G
Sbjct: 465 YKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGI 524
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
Y L+ G+ GN GA ++F +QF G++PD LIN + + AY F
Sbjct: 525 YTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQ 584
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGV 395
M K G P +++ + +L RA + R+ EA + +F++
Sbjct: 585 MEKNGCTPDAAVYRTMMTWMCRRMELPRAFSLWLKYLRNIRSQEDEAIKAIEGYFEK--- 641
Query: 396 VEEVEHVLREYGLRETYSKI 415
+EVE +R GL E K+
Sbjct: 642 -QEVEKAVR--GLLEMDFKL 658
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 78/182 (42%), Gaps = 1/182 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
++ + ++R Y+ +I G + + ++ + M D T+M+ ++AG ++
Sbjct: 294 KDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVR 353
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A E E+ G D Y ++ + G+L L E+ + + + Y L+
Sbjct: 354 DALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILI 413
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G NG + AQ +F ++ G P A LI+ GQ +KA+ F M + G
Sbjct: 414 SGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKM-EIGRN 472
Query: 343 PS 344
PS
Sbjct: 473 PS 474
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 86/202 (42%), Gaps = 3/202 (1%)
Query: 192 TLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYV 251
TL A+K G V++ +Y K G A ETF ++ D +Y ++ +
Sbjct: 113 TLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLI 172
Query: 252 RAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDAR 311
+ L + M + L+ G +GN + A +F+ + GI PDA
Sbjct: 173 QKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAF 232
Query: 312 MCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS-DKCVALILSACEKENQLNRALEFLID 370
++I+ + + AY F M+ +G+ P C AL+ C + +++ A L
Sbjct: 233 TYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLD-RVDEAFSLLRL 291
Query: 371 LERDGFMVG-KEASCTLAAWFK 391
E+DG+++ + SC + F+
Sbjct: 292 FEKDGYVLDVRGYSCLIRGLFR 313
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/237 (17%), Positives = 95/237 (40%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ ++ +I G K +++A + M +RG + D T V++ ++ + A F
Sbjct: 195 NVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLF 254
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+++K G D + +++ + +D LLR + + Y L+RG
Sbjct: 255 DKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRA 314
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E Q ++ + + PD + +++ AG+ + A M ++G+ P C
Sbjct: 315 KRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCY 374
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+++ L+ A +++ R + L + R G+ + + + E
Sbjct: 375 NVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNE 431
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 94/227 (41%), Gaps = 11/227 (4%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
L+ ++ + +L ++F Y +I G + ++ +A MK G D VT +
Sbjct: 218 LFDEMTQRGILPDAFT-----YCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNAL 272
Query: 212 VVMYSKAGNLKMAEETFEEIKLL---GEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
+ + L +E F ++L G LD R Y ++ RA + ++L R+M
Sbjct: 273 LNGFCM---LDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIE 329
Query: 269 QEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
V +Y +++G + G A + + +G+ PD +LI + G +
Sbjct: 330 DNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSE 389
Query: 329 AYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
A + + + P+ K ++++S + A E ++E+ G
Sbjct: 390 ARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLG 436
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 52/273 (19%), Positives = 109/273 (39%), Gaps = 10/273 (3%)
Query: 152 LYLQVAELALLEESFEANIRDY--TKIIHGYGKKMQIQNAENTLLA-------MKRRGFI 202
+YL++ E+F ++RD+ T ++ Y + + +N LL M + +
Sbjct: 135 VYLKMGLTDKAMETF-GSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCL 193
Query: 203 CDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVL 262
+ T ++++ K+GN+K A F+E+ G D +Y ++ R+ +D L
Sbjct: 194 PNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRL 253
Query: 263 LREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQM 322
+M V ALL G+ M + A + + G D R + LI
Sbjct: 254 FDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFR 313
Query: 323 AGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEA 382
A + + ++ M + ++P +++ + ++ ALE L ++ G +
Sbjct: 314 AKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVC 373
Query: 383 SCTLAAWFKRLGVVEEVEHVLREYGLRETYSKI 415
L F +G++ E + E + + +
Sbjct: 374 YNVLIKGFCDMGLLSEARSLQLEISRHDCFPNV 406
>gi|224138176|ref|XP_002326537.1| predicted protein [Populus trichocarpa]
gi|222833859|gb|EEE72336.1| predicted protein [Populus trichocarpa]
Length = 826
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 100/243 (41%), Gaps = 35/243 (14%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+ E E +I Y +I G + ++ AE L +RG ++++ T ++ +Y K G
Sbjct: 336 ITENGCEPDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGK 395
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG-----------MLDRG---------- 259
A + F + G PLD +YG++V V AG M++RG
Sbjct: 396 CLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNV 455
Query: 260 --------------EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAG 305
++LL EM Q + + + V L+ G+ +G + A+++FE G
Sbjct: 456 LMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKG 515
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
+ P +I Y G A T Q M+ P + + I+ K+N L+ AL
Sbjct: 516 MDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNAL 575
Query: 366 EFL 368
+
Sbjct: 576 KLF 578
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 74/177 (41%), Gaps = 1/177 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
NI Y ++ GY K+ ++ A +K +GF+ T +M+ K N K +
Sbjct: 239 NIVFYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLL 298
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E+K G ++ + Y S+V A ++ G LR + Y L+ G +
Sbjct: 299 VEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRD 358
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
G A+ + E G++P+ LI+ Y G+ +A+ F M + G P D
Sbjct: 359 GKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKG-HPLD 414
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 87/207 (42%), Gaps = 6/207 (2%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
++ G+ + ++ A+ +G V M+ Y K G + A + +K
Sbjct: 491 LVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGD 550
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
D+ +Y +++ YV+ L L +M Q+ Y +L+ G+ G+S A+
Sbjct: 551 HSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAE 610
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILS-- 353
+ FE ++ +G+ P+ +LI + G+ KA + F+ M P+D +++
Sbjct: 611 KTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFELMLLNRCIPNDVTFNYLINGL 670
Query: 354 ----ACEKENQLNRALEFLIDLERDGF 376
A N+ N +LE L D F
Sbjct: 671 TNNLATAVSNKANESLEIKASLMMDFF 697
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 93/245 (37%), Gaps = 35/245 (14%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
+ + E+ ++ Y ++HG ++ A M RG + D V++ K
Sbjct: 404 IGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKK 463
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
G L A+ E+ LD ++V ++R G LD + L A+ + G Y
Sbjct: 464 GRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGY 523
Query: 279 KALLRGYS----MNGNSEGAQR-------------------------VFEAIQFAG---- 305
A+++GY MN QR + A++ G
Sbjct: 524 NAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVK 583
Query: 306 --ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNR 363
P+ LIN + G S +A F+ MR +GL+P+ +++ KE ++++
Sbjct: 584 QKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISK 643
Query: 364 ALEFL 368
A F
Sbjct: 644 ACSFF 648
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 82/200 (41%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
++ G K+ +++ + +G I + V +V Y K G+++ A F+E+K+ G
Sbjct: 211 MVRGLCKERKVEEGRKLINDRWGKGCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKG 270
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
+YG M+ + + LL EM + V V +VY +++ +G
Sbjct: 271 FLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVG 330
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
+ I G PD LI+ G+ +A ++ K GL P+ ++
Sbjct: 331 KTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVY 390
Query: 356 EKENQLNRALEFLIDLERDG 375
K+ + RA + I + G
Sbjct: 391 CKQGKCLRAFDLFIGMTEKG 410
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 90/240 (37%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ F Y +I+G KK + + L+ MK RG + +V K G
Sbjct: 269 KGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIE 328
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
+T I G D +Y +++ R G + E LL + + Y L+
Sbjct: 329 VGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIH 388
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
Y G A +F + G D L++ AG+ A T M + G+ P
Sbjct: 389 VYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLP 448
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
++++ K+ +L+ A L+++ + S TL F R G ++E + +
Sbjct: 449 DANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLF 508
>gi|356495784|ref|XP_003516753.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Glycine max]
Length = 558
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 97/236 (41%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E FE ++ YT I YG + + + L M+ G + VT T +++ KAG L+
Sbjct: 293 EHGFEPDVFSYTNFIEAYGHERDFRKVDQVLEEMRENGCPPNAVTYTSVMLHLGKAGQLR 352
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A E +E++K G D Y SM+ +AG L + +M Q V Y +++
Sbjct: 353 KALEVYEKMKSDGCVADTPFYSSMIFILGKAGRLKDACDVFEDMPKQGVVRDVVTYNSMI 412
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
+ E A R+ + ++ P+ L+ + + +M K +
Sbjct: 413 STACAHSREETALRLLKEMEDGSCKPNVGTYHRLLKMCCKKKRMKVLKFLLDHMFKNNIS 472
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
P +L+++A K ++ A FL ++ GF LA + ++EE
Sbjct: 473 PDLATYSLLVNALRKSGKVEDAYSFLEEMVLRGFTPKPSTLKKLAGELESKSMLEE 528
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 98/245 (40%), Gaps = 12/245 (4%)
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
R + ++HG+ + NA + MK GF D + T + Y + + ++ EE
Sbjct: 266 RSFNVLMHGWCRARDFDNARKAMEDMKEHGFEPDVFSYTNFIEAYGHERDFRKVDQVLEE 325
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
++ G P + +Y S+++ +AG L + + +M + + Y +++ G
Sbjct: 326 MRENGCPPNAVTYTSVMLHLGKAGQLRKALEVYEKMKSDGCVADTPFYSSMIFILGKAGR 385
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
+ A VFE + G+ D +I+ + + A + M +P+
Sbjct: 386 LKDACDVFEDMPKQGVVRDVVTYNSMISTACAHSREETALRLLKEMEDGSCKPNVGTYHR 445
Query: 351 ILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAW------FKRLGVVEEVEHVLR 404
+L + + + L+FL+D M S LA + ++ G VE+ L
Sbjct: 446 LLKM-CCKKKRMKVLKFLLD-----HMFKNNISPDLATYSLLVNALRKSGKVEDAYSFLE 499
Query: 405 EYGLR 409
E LR
Sbjct: 500 EMVLR 504
>gi|225450007|ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
[Vitis vinifera]
Length = 644
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 6/205 (2%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
++ + E+ L+ + F YT ++ GY K I NA L M +RG T T++
Sbjct: 345 VFQDMCEMGLIPDCFS-----YTTMMAGYCKVKDISNALKYLGKMLKRGIRPSVATYTLL 399
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ K GN++MAE F+ + G D SY +++ Y + G L + LL M + V
Sbjct: 400 IDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGV 459
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
Y L+ G G A+ + + + G +PD +I + G ++A+
Sbjct: 460 SPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFL 519
Query: 332 AFQNMRKAGLEPS-DKCVALILSAC 355
F M + LEP C AL+ C
Sbjct: 520 LFFYMSEHHLEPDVVTCSALLNGYC 544
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 75/180 (41%)
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
GN+ A + F+++ +G D SY +M+ Y + + L +M + + Y
Sbjct: 337 GNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGIRPSVATY 396
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
L+ GN E A+ +F+ + G+ PD L+N Y G QKA+ MR
Sbjct: 397 TLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRS 456
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
AG+ P +++ K +N A + L +L R GF + F G EE
Sbjct: 457 AGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEE 516
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 80/182 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L+ ++ YT +I K ++ AE M G + D V+ ++ Y K G+
Sbjct: 384 MLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGH 443
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ A E ++ G D +Y ++ ++ G+++ + +L E+ + +
Sbjct: 444 LQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTN 503
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G+S GN E A +F + + PD C+ L+N Y +A F M AG
Sbjct: 504 IIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAG 563
Query: 341 LE 342
L+
Sbjct: 564 LK 565
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 86/207 (41%), Gaps = 3/207 (1%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ E ++ Y +++GYGKK +Q A L M+ G D VT +++ K G
Sbjct: 419 MITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGL 478
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A++ +E+ G D ++ +++ + G + +L M + A
Sbjct: 479 VNEAKDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSA 538
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL GY A +F + AG+ D + LI+ + G A M + G
Sbjct: 539 LLNGYCRTRCMAEANVLFHKMLDAGLKADVILYNSLIHGFCSLGNIDDACHLVSMMIEHG 598
Query: 341 LEPSDKCVALILSACEK---ENQLNRA 364
+ P++ ++ EK EN + RA
Sbjct: 599 IMPNNITHHALVLGYEKKCVENPVERA 625
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 81/184 (44%), Gaps = 3/184 (1%)
Query: 185 QIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYG 244
Q+ A + L MK +G + +++ + Y GN+ + E+K LG D +Y
Sbjct: 201 QLNLAWDFLKEMKSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYT 260
Query: 245 SMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFA 304
++ + + +L +L +M V++ S +++ GY G SE A V E
Sbjct: 261 IVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDVLEVFN-- 318
Query: 305 GITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
++P+ + I+ G KA FQ+M + GL P +++ K ++ A
Sbjct: 319 -LSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNA 377
Query: 365 LEFL 368
L++L
Sbjct: 378 LKYL 381
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 75/192 (39%), Gaps = 9/192 (4%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
I GY + I L+ MK G D V T+++ K LK A ++ +G
Sbjct: 227 FISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLLKEATSILFKMTQMG 286
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE---VYKALLRGYSMNGNSE 292
LD S S+V Y + G + MD EV+ S V+ + + +GN
Sbjct: 287 VFLDSVSVSSVVDGYCKVGKSEEA------MDVLEVFNLSPNIFVFNSFISKLCTDGNML 340
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +VF+ + G+ PD ++ Y A M K G+ PS L++
Sbjct: 341 KAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGIRPSVATYTLLI 400
Query: 353 SACEKENQLNRA 364
+C K + A
Sbjct: 401 DSCCKPGNMEMA 412
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 94/207 (45%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I+G ++ Q++ L M +R ++ D+VT ++ Y GN A
Sbjct: 272 NLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLH 331
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E+ G + +Y +++ + +AG L+R L +M + ++ Y L+ G+S
Sbjct: 332 AEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQ 391
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A ++ + + G TP LIN + + G+ + A Q M + G P
Sbjct: 392 GFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSY 451
Query: 349 ALILSACEKENQLNRALEFLIDLERDG 375
+ I+S + +L +A + +++ G
Sbjct: 452 STIISGFCRNQELEKAFQLKVEMVAKG 478
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 91/223 (40%)
Query: 183 KMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRS 242
K ++ AE M G + T +++ + AGNL+M F E++ G + +
Sbjct: 181 KQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVT 240
Query: 243 YGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQ 302
Y +++ AY + + LLR M + + Y ++ G G + + E +
Sbjct: 241 YNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMS 300
Query: 303 FAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLN 362
PD LIN Y G +A M K GL P+ ++++ K LN
Sbjct: 301 KRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLN 360
Query: 363 RALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
RA+EFL + G TL F + G +++ +++E
Sbjct: 361 RAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKE 403
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 101/248 (40%), Gaps = 6/248 (2%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E N+ Y +I G+ ++ M+R G + + VT ++ Y K
Sbjct: 194 MVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCK--- 250
Query: 221 LKMAEETFEEIKLL---GEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
L+ E F+ ++L+ G + SY ++ R G + +L EM +
Sbjct: 251 LRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVT 310
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
+ L+ GY GN A + + G++P+ LIN+ AG +A MR
Sbjct: 311 FNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMR 370
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
GL P+ + ++ ++ L +A + + ++ +GF L LG +E
Sbjct: 371 DRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRME 430
Query: 398 EVEHVLRE 405
+ +L+E
Sbjct: 431 DASGLLQE 438
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 87/209 (41%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+ N R YT +I G+ ++ ++ A + M GF +T ++ + G ++
Sbjct: 371 DRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRME 430
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A +E+ G D SY +++ + R L++ L EM A+ + Y +L+
Sbjct: 431 DASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLI 490
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
+G +F+ + G+ PD LINAY + G KA M + G
Sbjct: 491 QGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFS 550
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDL 371
P ++++ K+++ A L+ L
Sbjct: 551 PDIVTYNVLINGFNKQSRTKEAKRLLLKL 579
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 118/265 (44%), Gaps = 25/265 (9%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E F I Y +I+G+ ++++A L M RGFI D V+ + ++ + +
Sbjct: 404 MVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQE 463
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEV--LLREMDAQEVYVGSEVY 278
L+ A + E+ G D +Y S++ + L GEV L +EM + + Y
Sbjct: 464 LEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRL--GEVCDLFQEMLSLGLPPDEVTY 521
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
+L+ Y + G+ + A R+ + + G +PD +LIN + ++++A +
Sbjct: 522 TSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLY 581
Query: 339 AGLEPS--------DKC--------VALILSACEKE--NQLNRALEFLIDLERDGFMVGK 380
P+ D C +AL+ C K N+ +R LE ++ + G+ + +
Sbjct: 582 EESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESML---QKGYKLNE 638
Query: 381 EASCTLAAWFKRLGVVEEVEHVLRE 405
E + ++G +E+ ++ +E
Sbjct: 639 EVYNVIIHGHSKVGNIEKAYNLYKE 663
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 107/262 (40%), Gaps = 53/262 (20%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E F ++ Y+ II G+ + +++ A + M +G D T + ++ K
Sbjct: 439 MIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRR 498
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG-------------------EV 261
L + F+E+ LG P D+ +Y S++ AY G LD+ V
Sbjct: 499 LGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNV 558
Query: 262 LLREMDAQ---------------EVYVGSEV-------------YK---ALLRGYSMNGN 290
L+ + Q E V +E+ +K AL++G+ M G
Sbjct: 559 LINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGL 618
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
A RV E++ G + + ++I+ + G +KAY ++ M +G P +
Sbjct: 619 MNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMA 678
Query: 351 ILSACE---KENQLNRALEFLI 369
+ + KE +LN+ L++ +
Sbjct: 679 LAKSLYHEGKEVELNQLLDYTL 700
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 93/216 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ N+ YT +I+ K + A L M+ RG + T T ++ +S+ G
Sbjct: 334 MVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGF 393
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
LK A + +E+ G +Y +++ + G ++ LL+EM + Y
Sbjct: 394 LKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYST 453
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G+ N E A ++ + GI+PD + LI + + FQ M G
Sbjct: 454 IISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLG 513
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
L P + +++A E L++AL ++ + GF
Sbjct: 514 LPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGF 549
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 121/292 (41%), Gaps = 21/292 (7%)
Query: 107 VKQIICVSPETGNLSDLLAAWVRFMK-PRRADWLAVLKQLKLMEHPLYLQVAELALLEES 165
+K + CV P+ + L+ + +F K PR ++ + +K
Sbjct: 291 MKDVGCV-PDIITYNGLINCYCKFEKMPRAFEYFSEMKN-------------------NG 330
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
+ N+ Y+ +I + K+ +Q A L M+R G + ++ T T ++ KAGNL A
Sbjct: 331 LKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAW 390
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+ ++ G L+ +Y +++ +AG + E + R M + +VY AL+ GY
Sbjct: 391 KLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGY 450
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
E A ++ + + I PD + +I + + ++ + M+ G+ +
Sbjct: 451 IKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANP 510
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
I+ A K + + AL F +++ G C L G+VE
Sbjct: 511 VISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVE 562
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 106/254 (41%), Gaps = 39/254 (15%)
Query: 159 LALLEESFEANIRD----YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
+ +L++ E NI+ Y II G+ + +++ + L MK RG + V T ++
Sbjct: 460 MKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDA 519
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
Y KAG A F+E++ +G +Y ++ AG+++ M + +
Sbjct: 520 YFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPN 579
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPD------------------------A 310
VY +L+ G N E A+++F+ +Q G+TPD +
Sbjct: 580 VAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLIS 639
Query: 311 RMCAL-----------LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKEN 359
RM L L++ + G+ +A F M + G+ P + +L K
Sbjct: 640 RMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRG 699
Query: 360 QLNRALEFLIDLER 373
QL+ A+E ++ER
Sbjct: 700 QLDEAIELKNEMER 713
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 97/217 (44%), Gaps = 5/217 (2%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
L++Q+ E+ L ++ Y +I GYGK ++ + MK G + D +T +
Sbjct: 252 LFVQMREMGL-----SPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGL 306
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ Y K + A E F E+K G + +Y +++ A+ + GM+ LL +M +
Sbjct: 307 INCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGL 366
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
Y +L+ GN A ++ + AG+ + L++ AG+ +A
Sbjct: 367 LPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEE 426
Query: 332 AFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFL 368
F++M K G+ P+ + ++ K ++ A++ L
Sbjct: 427 VFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKIL 463
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 101/264 (38%), Gaps = 11/264 (4%)
Query: 152 LYLQVAELALLEESFEA-----NIRDYTK------IIHGYGKKMQIQNAENTLLAMKRRG 200
L+ EL LLEE+ E N R K ++H K Q M G
Sbjct: 166 LFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAG 225
Query: 201 FICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGE 260
T VM+ K G+L+ + F +++ +G D +Y S++ Y + G L+
Sbjct: 226 IAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVA 285
Query: 261 VLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAY 320
L EM Y L+ Y A F ++ G+ P+ + LI+A+
Sbjct: 286 SLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAF 345
Query: 321 QMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGK 380
G Q A +MR+ GL P++ ++ A K L A + L D+ + G +
Sbjct: 346 CKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNI 405
Query: 381 EASCTLAAWFKRLGVVEEVEHVLR 404
L + G + E E V R
Sbjct: 406 VTYTALLDGLCKAGRMIEAEEVFR 429
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 114/277 (41%), Gaps = 36/277 (12%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNA------------------------------ 189
++L++ N + YT ++HGY K ++++A
Sbjct: 430 SMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQR 489
Query: 190 --ENTLLA---MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYG 244
E T L MK RG + V T ++ Y KAG A F+E++ +G +Y
Sbjct: 490 KLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYC 549
Query: 245 SMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFA 304
++ AG+++ M + + VY +L+ G N E A+++F+ +Q
Sbjct: 550 VLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCR 609
Query: 305 GITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
G+TPD LI+ G Q+A M + +E ++S + +L++A
Sbjct: 610 GMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQA 669
Query: 365 LEFLIDLERDGFMVGKEAS-CTLAAWFKRLGVVEEVE 400
+F ++ G + + C L ++KR + E +E
Sbjct: 670 RKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIE 706
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 100/237 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y +I K+ ++N+ + M+ G D VT ++ Y K G+L+ F
Sbjct: 229 SVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLF 288
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E+K +G D +Y ++ Y + + R EM + Y L+ +
Sbjct: 289 NEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKE 348
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G +GA ++ ++ G+ P+ LI+A AG +A+ +M +AG++ +
Sbjct: 349 GMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTY 408
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+L K ++ A E + +DG ++ L + + +E+ +L++
Sbjct: 409 TALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQ 465
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 52/132 (39%)
Query: 274 GSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAF 333
GS V+ L + G E A F ++ P AR C L++ +G Q F
Sbjct: 159 GSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFF 218
Query: 334 QNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRL 393
+M AG+ PS +++ KE L + + + G +L + ++
Sbjct: 219 NDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKV 278
Query: 394 GVVEEVEHVLRE 405
G +EEV + E
Sbjct: 279 GSLEEVASLFNE 290
>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
Length = 1095
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 96/229 (41%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +IHG+ + +I A M R+ T T ++ Y + G A E++
Sbjct: 337 YNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQ 396
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ G + +Y +++ Y + L L++ + ++ + + +Y L+ G+ G
Sbjct: 397 ITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVS 456
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+++ + + GI PD + LIN G + M+K+G+ P++ ++
Sbjct: 457 KAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLV 516
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEH 401
K AL++ +D+ R G + L F R G++ E E
Sbjct: 517 FYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQ 565
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 91/198 (45%), Gaps = 3/198 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT ++ G+ K+ ++ A L M +G + D + T ++ G +K A F+EI
Sbjct: 687 YTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEI- 745
Query: 233 LLGEPL--DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
+ E L D +Y SM+ Y++ G ++ E L+R M EVY S Y L+ GY G
Sbjct: 746 ICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQ 805
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
++ + GI PD LLI G + A + M G+ P + +
Sbjct: 806 LSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDI 865
Query: 351 ILSACEKENQLNRALEFL 368
++ A ++++++ AL+
Sbjct: 866 LIKAFSEKSKMSNALQLF 883
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 102/238 (42%), Gaps = 6/238 (2%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y I++ Y KK + ++A L M++ G D T +M+ K LK + +
Sbjct: 263 NAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMI---DKLCKLKRSARAY 319
Query: 229 EEIKLLGE---PLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+K + E D+ SY +++ + G ++ + +M Q + Y AL+ GY
Sbjct: 320 LLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGY 379
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
NG ++ A+RV +Q G+ P + L+N Y + A + +R + +
Sbjct: 380 CRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINR 439
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+++ + ++++A + L + DG L ++G++ E + +L
Sbjct: 440 TMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEIL 497
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 86/208 (41%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+L + + ++ Y+ +I+G K I + L M++ G + + V T +V + KAG
Sbjct: 464 CMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAG 523
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ K A + F +I G + + +++ ++ R GM+ E + M ++ +
Sbjct: 524 HAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFN 583
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
++ Y GN A V++ + G PD L+ G +A + +
Sbjct: 584 CIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEK 643
Query: 340 GLEPSDKCVALILSACEKENQLNRALEF 367
+K + +L K L+ AL+
Sbjct: 644 ACAIDEKTLNTLLVGICKHGTLDEALDL 671
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 104/255 (40%), Gaps = 6/255 (2%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
AN + ++ + ++ I AE M R D + ++ Y + GN+ A
Sbjct: 542 ANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSV 601
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
++ + G P D +YGS++ + G L + + + + + + + LL G
Sbjct: 602 YDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICK 661
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
+G + A + E + I PD +L++ + G+ A Q M + GL P
Sbjct: 662 HGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIA 721
Query: 348 VALILSACEKENQLNRALEFLID--LERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+L+ E Q+ +A ++ + ++G A ++ + + G + E+E ++R
Sbjct: 722 YTCLLNGLVNEGQV-KAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRN 780
Query: 406 YGLRETYSKIPGSRS 420
E Y P S S
Sbjct: 781 MHENEVY---PSSAS 792
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 103/250 (41%), Gaps = 18/250 (7%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++HGY KK Q+ M + G D VT +++ + G +++A + E++
Sbjct: 793 YNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMV 852
Query: 233 LLGEPLDKRSYGSMVMAYVR----------------AGMLDRGEVLLREMDAQEVYVGSE 276
L G D ++ ++ A+ G +D L +M A V V SE
Sbjct: 853 LEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGV-VPSE 911
Query: 277 VYKA-LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
V ++ ++RG G E A VF +I AG+ P L++ + A+ Q
Sbjct: 912 VAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQL 971
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGV 395
M GL+ ++++ + + AL+ +++ G + TL G
Sbjct: 972 MESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGT 1031
Query: 396 VEEVEHVLRE 405
+++ E +L++
Sbjct: 1032 MQDGEKLLKD 1041
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 68/169 (40%), Gaps = 1/169 (0%)
Query: 237 PLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQR 296
PLD + ++ + G L + E +L++M + + Y +L Y G + A R
Sbjct: 227 PLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKKGRCKSALR 285
Query: 297 VFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACE 356
+ + ++ GI D ++I+ +S +AY + MR+ L P + ++
Sbjct: 286 ILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFF 345
Query: 357 KENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
E ++N A+ + R L + R G +E VL E
Sbjct: 346 GEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYE 394
>gi|9294596|dbj|BAB02877.1| unnamed protein product [Arabidopsis thaliana]
Length = 695
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 110/242 (45%), Gaps = 17/242 (7%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ +T I+ GY ++ ++ A M R D+++ T+M+ Y +AG + E F
Sbjct: 301 DVISWTSIVKGYVERGNLKLARTYFDQMPVR----DRISWTIMIDGYLRAGCFNESLEIF 356
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++ G D+ + S++ A G L+ GE + +D ++ V AL+ Y
Sbjct: 357 REMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKC 416
Query: 289 GNSEGAQRVFEAI-QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G SE AQ+VF + Q T A + L N GQ Q+A F M+ ++P D
Sbjct: 417 GCSEKAQKVFHDMDQRDKFTWTAMVVGLANN-----GQGQEAIKVFFQMQDMSIQPDDIT 471
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCT----LAAWFKRLGVVEEVEHVL 403
+LSAC +++A +F + D + E S + R G+V+E +L
Sbjct: 472 YLGVLSACNHSGMVDQARKFFAKMRSDHRI---EPSLVHYGCMVDMLGRAGLVKEAYEIL 528
Query: 404 RE 405
R+
Sbjct: 529 RK 530
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 85/187 (45%), Gaps = 8/187 (4%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ + +I GY + + + + L+ M+R VTL +++ SK + + +
Sbjct: 200 DVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVH 259
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E + R ++V AY G +D + R M A++V + ++++GY
Sbjct: 260 EYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVI----SWTSIVKGYVER 315
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
GN + A+ F+ + D ++I+ Y AG ++ F+ M+ AG+ P + +
Sbjct: 316 GNLKLARTYFDQMP----VRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTM 371
Query: 349 ALILSAC 355
+L+AC
Sbjct: 372 VSVLTAC 378
>gi|224133408|ref|XP_002321560.1| predicted protein [Populus trichocarpa]
gi|222868556|gb|EEF05687.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 94/220 (42%), Gaps = 3/220 (1%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ N+ Y ++ GY + QI A + L MK+R D +T T ++ + AG
Sbjct: 231 MVKRGLTPNLTSYNTMLKGYFRAGQINEAWDFFLEMKKRDCEIDVITYTTVIHGFGVAGE 290
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+K A + F+ + G +Y + + + +D V+ EM + S Y
Sbjct: 291 IKRARKVFDTMVKKGVLPSVATYNAFIQVLCKKDNVDNAIVIFEEMVVKGYVPNSITYNL 350
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++RG G E A ++ G P+ + L+I + G+ KA FQ M
Sbjct: 351 VIRGLCHRGEMERAMEFMGRMKDDGCEPNVQTYNLVIRYFCDEGEIDKALDLFQKMTSGD 410
Query: 341 LEPSDKCVALILSAC---EKENQLNRALEFLIDLERDGFM 377
P+ +++SA +K + L A LI++ GF+
Sbjct: 411 CLPNLDTYNILISAMFVRKKSDDLLVAGNLLIEMVDRGFV 450
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 90/208 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+ + F A+ Y +++G+ + A L M +RG + + M+ Y +AG
Sbjct: 196 VFKGKFRADCVSYNVMVNGWCLIKRTNKALEMLKEMVKRGLTPNLTSYNTMLKGYFRAGQ 255
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + F E+K +D +Y +++ + AG + R + M + V Y A
Sbjct: 256 INEAWDFFLEMKKRDCEIDVITYTTVIHGFGVAGEIKRARKVFDTMVKKGVLPSVATYNA 315
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ N + A +FE + G P++ L+I G+ ++A M+ G
Sbjct: 316 FIQVLCKKDNVDNAIVIFEEMVVKGYVPNSITYNLVIRGLCHRGEMERAMEFMGRMKDDG 375
Query: 341 LEPSDKCVALILSACEKENQLNRALEFL 368
EP+ + L++ E ++++AL+
Sbjct: 376 CEPNVQTYNLVIRYFCDEGEIDKALDLF 403
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 86/207 (41%), Gaps = 1/207 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+++ + I+ K +++ A N K + F D V+ VMV + A E
Sbjct: 170 DLQSFNTILDVLCKSKRVEMAYNLFKVFKGK-FRADCVSYNVMVNGWCLIKRTNKALEML 228
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+ G + SY +M+ Y RAG ++ EM ++ + Y ++ G+ +
Sbjct: 229 KEMVKRGLTPNLTSYNTMLKGYFRAGQINEAWDFFLEMKKRDCEIDVITYTTVIHGFGVA 288
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A++VF+ + G+ P I A F+ M G P+
Sbjct: 289 GEIKRARKVFDTMVKKGVLPSVATYNAFIQVLCKKDNVDNAIVIFEEMVVKGYVPNSITY 348
Query: 349 ALILSACEKENQLNRALEFLIDLERDG 375
L++ ++ RA+EF+ ++ DG
Sbjct: 349 NLVIRGLCHRGEMERAMEFMGRMKDDG 375
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 82/199 (41%), Gaps = 4/199 (2%)
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
+ + I Y + A L+M + G D + ++ + K+ ++MA F+
Sbjct: 137 KTFAIIAERYASAGKPHRAVKVFLSMHQFGCFQDLQSFNTILDVLCKSKRVEMAYNLFKV 196
Query: 231 IKLLGE-PLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
K G+ D SY MV + ++ +L+EM + + Y +L+GY G
Sbjct: 197 FK--GKFRADCVSYNVMVNGWCLIKRTNKALEMLKEMVKRGLTPNLTSYNTMLKGYFRAG 254
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV- 348
A F ++ D +I+ + +AG+ ++A F M K G+ PS
Sbjct: 255 QINEAWDFFLEMKKRDCEIDVITYTTVIHGFGVAGEIKRARKVFDTMVKKGVLPSVATYN 314
Query: 349 ALILSACEKENQLNRALEF 367
A I C+K+N N + F
Sbjct: 315 AFIQVLCKKDNVDNAIVIF 333
>gi|168011113|ref|XP_001758248.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690704|gb|EDQ77070.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 658
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 91/200 (45%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++R Y+ +I ++ +AE MK + + + TL ++ Y++ L+ E+
Sbjct: 218 DVRSYSSLIETLVVVRRLDDAEAAYAEMKSKSYKINLRTLNALLSAYTRKSLLEQVEKLM 277
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ + G L SYG ++ AY RAG LD+ + M + V + +Y L+ Y
Sbjct: 278 QDAEDAGLKLSTFSYGLLIDAYSRAGRLDQAKAAFHNMKVENVPANAFIYSRLMVAYRNA 337
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
+G R+ + + + I P+ + +LI+ Y G+ +A F M K G +P
Sbjct: 338 RQWDGTIRLLKDMYASNIKPNQFIFNILIDTYGKFGRLPQAMRTFAQMDKEGFKPDVVTW 397
Query: 349 ALILSACEKENQLNRALEFL 368
++ A + + AL+ L
Sbjct: 398 NSLIEAHCRAGLITEALDLL 417
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 93/212 (43%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
E+ AN Y++++ Y Q L M +Q +++ Y K G L
Sbjct: 318 ENVPANAFIYSRLMVAYRNARQWDGTIRLLKDMYASNIKPNQFIFNILIDTYGKFGRLPQ 377
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A TF ++ G D ++ S++ A+ RAG++ LL++M +E Y +L
Sbjct: 378 AMRTFAQMDKEGFKPDVVTWNSLIEAHCRAGLITEALDLLKQMQERECVPSLHTYNIILN 437
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
+ + + + ++F G+ P+ L+++Y + + ++A + M+ GL+P
Sbjct: 438 ALGWHNRWKEMALLLDEMRFKGLDPNVVTYTTLVDSYGTSKRYREASEYLKQMKSQGLQP 497
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDG 375
S + ++ K +A+E +E+DG
Sbjct: 498 STSVYCALANSYAKRGLCEQAMEVFKSMEKDG 529
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 109/254 (42%), Gaps = 39/254 (15%)
Query: 161 LLEESFEANIRD----YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS 216
LL++ + +NI+ + +I YGK ++ A T M + GF D VT ++ +
Sbjct: 346 LLKDMYASNIKPNQFIFNILIDTYGKFGRLPQAMRTFAQMDKEGFKPDVVTWNSLIEAHC 405
Query: 217 KAGN-------LKMAEE----------------------------TFEEIKLLGEPLDKR 241
+AG LK +E +E++ G +
Sbjct: 406 RAGLITEALDLLKQMQERECVPSLHTYNIILNALGWHNRWKEMALLLDEMRFKGLDPNVV 465
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI 301
+Y ++V +Y + L++M +Q + + VY AL Y+ G E A VF+++
Sbjct: 466 TYTTLVDSYGTSKRYREASEYLKQMKSQGLQPSTSVYCALANSYAKRGLCEQAMEVFKSM 525
Query: 302 QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQL 361
+ G+ + M LLINA+ +AG+ +A++ F + + G+ P ++ A K QL
Sbjct: 526 EKDGVELNLSMLNLLINAFGVAGKYVEAFSVFDYILEVGMSPDVVTYTTLMKALIKAEQL 585
Query: 362 NRALEFLIDLERDG 375
++ + + R G
Sbjct: 586 DQVPDVYEQMVRAG 599
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 85/197 (43%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+S++ N+R ++ Y +K ++ E + + G + +++ YS+AG L
Sbjct: 248 KSYKINLRTLNALLSAYTRKSLLEQVEKLMQDAEDAGLKLSTFSYGLLIDAYSRAGRLDQ 307
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A+ F +K+ P + Y +++AY A D LL++M A + ++ L+
Sbjct: 308 AKAAFHNMKVENVPANAFIYSRLMVAYRNARQWDGTIRLLKDMYASNIKPNQFIFNILID 367
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
Y G A R F + G PD LI A+ AG +A + M++ P
Sbjct: 368 TYGKFGRLPQAMRTFAQMDKEGFKPDVVTWNSLIEAHCRAGLITEALDLLKQMQERECVP 427
Query: 344 SDKCVALILSACEKENQ 360
S +IL+A N+
Sbjct: 428 SLHTYNIILNALGWHNR 444
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/248 (18%), Positives = 111/248 (44%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+E E + + Y +I+ Y + A + M+ + D + + ++ L
Sbjct: 177 QEGLEMDTKLYNDVINAYCRAGDPDKAFQYMGLMQACDLVPDVRSYSSLIETLVVVRRLD 236
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
AE + E+K ++ R+ +++ AY R +L++ E L+++ + + + + Y L+
Sbjct: 237 DAEAAYAEMKSKSYKINLRTLNALLSAYTRKSLLEQVEKLMQDAEDAGLKLSTFSYGLLI 296
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
YS G + A+ F ++ + +A + + L+ AY+ A Q ++M + ++
Sbjct: 297 DAYSRAGRLDQAKAAFHNMKVENVPANAFIYSRLMVAYRNARQWDGTIRLLKDMYASNIK 356
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ +++ K +L +A+ ++++GF +L R G++ E +
Sbjct: 357 PNQFIFNILIDTYGKFGRLPQAMRTFAQMDKEGFKPDVVTWNSLIEAHCRAGLITEALDL 416
Query: 403 LREYGLRE 410
L++ RE
Sbjct: 417 LKQMQERE 424
Score = 37.7 bits (86), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 42/218 (19%), Positives = 91/218 (41%), Gaps = 5/218 (2%)
Query: 193 LLAMKRRGFICDQVTLTVM----VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVM 248
LL + +CD T+ ++ + SK ++ A F+++K LG +Y ++V
Sbjct: 62 LLTLLISSAVCDSETIDLLSAIAITGLSKESRVEEAMLLFDQLKQLGVSPGPMAYNAIVG 121
Query: 249 AYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG-NSEGAQRVFEAIQFAGIT 307
R L+ L+ +M + Y + + + + RV I+ G+
Sbjct: 122 TCAREDRLETALELMNQMRGSGFQPDNVNYTLVFQACAKKRVGVDVISRVCANIEQEGLE 181
Query: 308 PDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
D ++ +INAY AG KA+ M+ L P + + ++ +L+ A
Sbjct: 182 MDTKLYNDVINAYCRAGDPDKAFQYMGLMQACDLVPDVRSYSSLIETLVVVRRLDDAEAA 241
Query: 368 LIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+++ + + L + + R ++E+VE ++++
Sbjct: 242 YAEMKSKSYKINLRTLNALLSAYTRKSLLEQVEKLMQD 279
>gi|225457182|ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Vitis vinifera]
Length = 869
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 106/262 (40%), Gaps = 13/262 (4%)
Query: 137 DWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAM 196
DW +L M H E +A+I Y ++ ++ AE M
Sbjct: 232 DWEELLGLFAQMRH-------------EGIQADIVTYNTLLSACARRGLGDEAEMVFRTM 278
Query: 197 KRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGML 256
G + D T + +V + K L+ E +E++ G D SY ++ A+ ++G +
Sbjct: 279 NEGGILPDITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSI 338
Query: 257 DRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALL 316
+ R+M + Y LL Y +G + + +F ++ + P+A +L
Sbjct: 339 KEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNIL 398
Query: 317 INAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
IN + G ++ T F +M + +EP+ + ++ AC K A + L+ + G
Sbjct: 399 INVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGV 458
Query: 377 MVGKEASCTLAAWFKRLGVVEE 398
+ +A + + + + EE
Sbjct: 459 VPSSKAYTGVIEAYGQAALYEE 480
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 123/303 (40%), Gaps = 37/303 (12%)
Query: 96 PRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLM------- 148
PR RC K + +L+D + F +R DW L+ K M
Sbjct: 93 PRGSIARCLDVFKNKL-------SLNDFALVFKEF--AQRGDWQRSLRLFKYMQRQIWCK 143
Query: 149 --EHPLYLQVAELA---LLEESFE-----------ANIRDYTKIIHGYGKKMQIQNAENT 192
EH + + L LLE+ E ++ +T +I+ YG+ Q +++
Sbjct: 144 PNEHIYTIMIGVLGREGLLEKCQEIFDEMPSHGVAPSVFSFTALINAYGRNGQYKSSLEL 203
Query: 193 LLAMKRRGFICDQVTLTVMVVMYSKA-GNLKMAE--ETFEEIKLLGEPLDKRSYGSMVMA 249
L MK+ LT V+ S A G L E F +++ G D +Y +++ A
Sbjct: 204 LDRMKKER--VSPSILTYNTVINSCARGGLDWEELLGLFAQMRHEGIQADIVTYNTLLSA 261
Query: 250 YVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPD 309
R G+ D E++ R M+ + Y L+ + E + + ++ G PD
Sbjct: 262 CARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPD 321
Query: 310 ARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLI 369
+L+ A+ +G ++A F+ M+ AG P+ +++L+ + + + + +
Sbjct: 322 ITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFL 381
Query: 370 DLE 372
+++
Sbjct: 382 EMK 384
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 77/193 (39%), Gaps = 35/193 (18%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++EE+ E N+ Y +I GK ++A+ LL M +G + T ++ Y +A
Sbjct: 418 MVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAAL 477
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A F + +G +Y S++ + + G+ E +L +M V + +
Sbjct: 478 YEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTF-- 535
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
NG +I A++ GQ ++A A+ M KA
Sbjct: 536 -------NG--------------------------VIEAFRQGGQFEEAIKAYVEMEKAR 562
Query: 341 LEPSDKCVALILS 353
+P ++ + +LS
Sbjct: 563 CDPDEQTLEAVLS 575
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 82/198 (41%), Gaps = 1/198 (0%)
Query: 209 TVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
T+M+ + + G L+ +E F+E+ G S+ +++ AY R G LL M
Sbjct: 150 TIMIGVLGREGLLEKCQEIFDEMPSHGVAPSVFSFTALINAYGRNGQYKSSLELLDRMKK 209
Query: 269 QEVYVGSEVYKALLRGYSMNG-NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQ 327
+ V Y ++ + G + E +F ++ GI D L++A G
Sbjct: 210 ERVSPSILTYNTVINSCARGGLDWEELLGLFAQMRHEGIQADIVTYNTLLSACARRGLGD 269
Query: 328 KAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLA 387
+A F+ M + G+ P + ++ K N+L + E L ++E G + L
Sbjct: 270 EAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLL 329
Query: 388 AWFKRLGVVEEVEHVLRE 405
+ G ++E V R+
Sbjct: 330 EAHAQSGSIKEAMGVFRQ 347
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 38/213 (17%), Positives = 82/213 (38%), Gaps = 35/213 (16%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
L + E+ + + YT +I YG Q E L+A
Sbjct: 451 LHMNEKGVVPSSKAYTGVIEAYG---QAALYEEALVA----------------------- 484
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
F + +G +Y S++ + + G+ E +L +M V + +
Sbjct: 485 ---------FNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTF 535
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
++ + G E A + + ++ A PD + +++ Y AG +++ F ++
Sbjct: 536 NGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKA 595
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDL 371
G+ PS C ++L+ K ++ + A + L ++
Sbjct: 596 LGILPSVMCYCMMLAVYAKADRWDDAHQLLDEM 628
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 69/168 (41%), Gaps = 1/168 (0%)
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
++ Y M+ R G+L++ + + EM + V + AL+ Y NG + + +
Sbjct: 145 NEHIYTIMIGVLGREGLLEKCQEIFDEMPSHGVAPSVFSFTALINAYGRNGQYKSSLELL 204
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQS-QKAYTAFQNMRKAGLEPSDKCVALILSACEK 357
+ ++ ++P +IN+ G ++ F MR G++ +LSAC +
Sbjct: 205 DRMKKERVSPSILTYNTVINSCARGGLDWEELLGLFAQMRHEGIQADIVTYNTLLSACAR 264
Query: 358 ENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ A + G + L F +L +E+V +L+E
Sbjct: 265 RGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLKE 312
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 94/215 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+LE ++ Y +I G + +A L M RG + DQ T T M+ K+
Sbjct: 453 MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKR 512
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ A + F+ ++ G + Y +++ Y +AG +D ++L +M ++ S + A
Sbjct: 513 VEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNA 572
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G +G + A + E + G+ P +LI+ G AY+ FQ M +G
Sbjct: 573 LIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG 632
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+P + +E +L A + + + +G
Sbjct: 633 TKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENG 667
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 81/186 (43%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
+ +LE+ NI Y K+++GY K ++ A + + G D T T +++ Y +
Sbjct: 207 MEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQR 266
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
+L A + F E+ L G ++ +Y ++ A +D L +M E + Y
Sbjct: 267 KDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTY 326
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
L++ + A + + ++ GI P+ +LI++ + +KA M +
Sbjct: 327 TVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLE 386
Query: 339 AGLEPS 344
GL P+
Sbjct: 387 KGLMPN 392
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/182 (20%), Positives = 84/182 (46%), Gaps = 1/182 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E + NI YT +I + + + A L M +G + + +T ++ Y K G ++
Sbjct: 351 ETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIE 410
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A + E ++ + R+Y ++ Y ++ + + +L +M ++V Y +L+
Sbjct: 411 DAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLI 469
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G +GN + A R+ + G+ PD +I++ + + ++A F ++ + G+
Sbjct: 470 DGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVN 529
Query: 343 PS 344
P+
Sbjct: 530 PN 531
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 83/184 (45%), Gaps = 1/184 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+LE+ N+ Y +I+GY K+ I++A + + M+ R + T ++ Y K+ N
Sbjct: 384 MLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-N 442
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A ++ D +Y S++ R+G D LL M+ + + Y +
Sbjct: 443 VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTS 502
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ + E A +F++++ G+ P+ M LI+ Y AG+ +A+ + M
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562
Query: 341 LEPS 344
P+
Sbjct: 563 CLPN 566
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 77/185 (41%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+L ++ N+ YT +I GY K ++ A L M + + + +T ++ G
Sbjct: 522 SLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADG 581
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
LK A E++ +G + ++ ++ G D ++M + + Y
Sbjct: 582 KLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYT 641
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
++ Y G A+ + ++ G++PD + LI Y GQ+ A+ + MR
Sbjct: 642 TFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDT 701
Query: 340 GLEPS 344
G EPS
Sbjct: 702 GCEPS 706
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 102/253 (40%), Gaps = 7/253 (2%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N R Y ++I GY K + A L M R + D VT ++ ++GN A
Sbjct: 427 NTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ G D+ +Y SM+ + ++ ++ L ++ + V +Y AL+ GY
Sbjct: 486 SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKA 545
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A + E + P++ LI+ G+ ++A + M K GL+P+
Sbjct: 546 GKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTD 605
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV---LRE 405
+++ K+ + A + G T + R G + + E + +RE
Sbjct: 606 TILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRE 665
Query: 406 YGLRE---TYSKI 415
G+ TYS +
Sbjct: 666 NGVSPDLFTYSSL 678
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 91/220 (41%), Gaps = 4/220 (1%)
Query: 202 ICDQV-TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGE 260
+C + T MV Y K GN++ A + +I G D +Y S++M Y + LD
Sbjct: 214 VCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAF 273
Query: 261 VLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAY 320
+ EM + Y L+ G + + A +F ++ P R +LI +
Sbjct: 274 KVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSL 333
Query: 321 QMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGK 380
+ + +A + M + G++P+ +++ + + + +A E L + G M
Sbjct: 334 CGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNV 393
Query: 381 EASCTLAAWFKRLGVVEEVEHVLREYGLRETYSKIPGSRS 420
L + + G++E+ V+ L E+ P +R+
Sbjct: 394 ITYNALINGYCKRGMIEDAVDVVE---LMESRKLSPNTRT 430
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 99/249 (39%), Gaps = 15/249 (6%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+E F +R YT +I + A N + M+ G + T TV++ +
Sbjct: 317 DECF-PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFE 375
Query: 223 MAEETFEEIKLLGEPLDKR------SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
A E LLG+ L+K +Y +++ Y + GM++ ++ M+++++ +
Sbjct: 376 KARE------LLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTR 429
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
Y L++GY N A V + + PD LI+ +G AY M
Sbjct: 430 TYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLM 488
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVV 396
GL P ++ + K ++ A + LE+ G L + + G V
Sbjct: 489 NDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKV 548
Query: 397 EEVEHVLRE 405
+E H++ E
Sbjct: 549 DEA-HLMLE 556
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 54/132 (40%)
Query: 243 YGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQ 302
Y +++ + R G++D + + EM +V Y ++ GY GN E A + I
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 303 FAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLN 362
AG+ PD LI Y A+ F M G ++ ++ +++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 363 RALEFLIDLERD 374
A++ + ++ D
Sbjct: 306 EAMDLFVKMKDD 317
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 90/241 (37%), Gaps = 24/241 (9%)
Query: 155 QVAELALLEE-----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLT 209
++ E LLEE + + T +IH K +A + M G D T T
Sbjct: 582 KLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYT 641
Query: 210 VMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQ 269
+ Y + G L AE+ +++ G D +Y S++ Y G + +L+ M
Sbjct: 642 TFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDT 701
Query: 270 EVYVGSEVYKALLRG-----YSMNGNSE-------------GAQRVFEAIQFAGITPDAR 311
+ +L++ Y SE + E + +TP+A+
Sbjct: 702 GCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAK 761
Query: 312 MCALLINAYQMAGQSQKAYTAFQNM-RKAGLEPSDKCVALILSACEKENQLNRALEFLID 370
LI G + A F +M R G+ PS+ +LS C K + N A + + D
Sbjct: 762 SYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDD 821
Query: 371 L 371
+
Sbjct: 822 M 822
>gi|15233234|ref|NP_188214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546758|sp|Q9LSB8.2|PP235_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15930
gi|332642227|gb|AEE75748.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 110/242 (45%), Gaps = 17/242 (7%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ +T I+ GY ++ ++ A M R D+++ T+M+ Y +AG + E F
Sbjct: 301 DVISWTSIVKGYVERGNLKLARTYFDQMPVR----DRISWTIMIDGYLRAGCFNESLEIF 356
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++ G D+ + S++ A G L+ GE + +D ++ V AL+ Y
Sbjct: 357 REMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKC 416
Query: 289 GNSEGAQRVFEAI-QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G SE AQ+VF + Q T A + L N GQ Q+A F M+ ++P D
Sbjct: 417 GCSEKAQKVFHDMDQRDKFTWTAMVVGLANN-----GQGQEAIKVFFQMQDMSIQPDDIT 471
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCT----LAAWFKRLGVVEEVEHVL 403
+LSAC +++A +F + D + E S + R G+V+E +L
Sbjct: 472 YLGVLSACNHSGMVDQARKFFAKMRSDHRI---EPSLVHYGCMVDMLGRAGLVKEAYEIL 528
Query: 404 RE 405
R+
Sbjct: 529 RK 530
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 85/187 (45%), Gaps = 8/187 (4%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ + +I GY + + + + L+ M+R VTL +++ SK + + +
Sbjct: 200 DVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVH 259
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E + R ++V AY G +D + R M A++V + ++++GY
Sbjct: 260 EYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVI----SWTSIVKGYVER 315
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
GN + A+ F+ + D ++I+ Y AG ++ F+ M+ AG+ P + +
Sbjct: 316 GNLKLARTYFDQMP----VRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTM 371
Query: 349 ALILSAC 355
+L+AC
Sbjct: 372 VSVLTAC 378
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 91/202 (45%), Gaps = 4/202 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM--YSKAGNLKMAEE 226
+I Y II+G K+ +++ A + L+ M+ G C+ + T ++M K G ++ A
Sbjct: 9 DIVSYNTIINGLCKEKRLEKAVDLLVEME--GSSCEPNSFTYCILMDGLCKEGRVEEAMR 66
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
E+K G +D Y +++ + G LDRG+ L EM + + VY L+ G+
Sbjct: 67 LLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFC 126
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G A V + GI PD +I G+++KA F M + G EPS
Sbjct: 127 KKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTV 186
Query: 347 CVALILSACEKENQLNRALEFL 368
++++ KE + A +
Sbjct: 187 TYNVLINGLCKEGCIGDAFKIF 208
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 101/248 (40%), Gaps = 2/248 (0%)
Query: 160 ALLEES--FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSK 217
+LLE+ E ++ + +I G K+ ++ A M RG + T +++ Y K
Sbjct: 245 SLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIK 304
Query: 218 AGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
+G + A E ++ + LG +Y M+ + + ML+ + L M +
Sbjct: 305 SGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFD 364
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y L+ + E A+R+F+ ++ + PD ++I+ AG A +M+
Sbjct: 365 YNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQ 424
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
+ GL P + ++ K Q+ A + G +L F +E
Sbjct: 425 QMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIE 484
Query: 398 EVEHVLRE 405
EV ++LR+
Sbjct: 485 EVINLLRQ 492
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 96/241 (39%), Gaps = 37/241 (15%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMV-------- 212
+LE+ N+ Y+ +I+G+ KK + A L M RG D T T M+
Sbjct: 106 MLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGR 165
Query: 213 --------------------VMYS-------KAGNLKMAEETFEEIKLLGEPLDKRSYGS 245
V Y+ K G + A + FE + G+ L+ SY +
Sbjct: 166 ARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNT 225
Query: 246 MVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV--YKALLRGYSMNGNSEGAQRVFEAIQF 303
++M G LD L + YV +V + +++G G + A +++ +
Sbjct: 226 LIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIE 285
Query: 304 AGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNR 363
G + C +LI Y +G KA ++ + K GL PS ++++ K + LN
Sbjct: 286 RGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNF 345
Query: 364 A 364
A
Sbjct: 346 A 346
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 81/190 (42%), Gaps = 5/190 (2%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
L+ +V +L L+ S Y+ +I G+ K + A+ MK G +
Sbjct: 314 LWKRVHKLGLVPSS-----TTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTL 368
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ K +L+ A F+E+K D S+ M+ ++AG + + LL +M +
Sbjct: 369 MASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGL 428
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
+ Y + + S G E A+ F+++ +GITPD + LI + + + ++
Sbjct: 429 TPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVIN 488
Query: 332 AFQNMRKAGL 341
+ M G+
Sbjct: 489 LLRQMADMGV 498
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 60/138 (43%)
Query: 172 DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEI 231
DY ++ K+ ++ A MK D ++ +M+ KAG++ A+E ++
Sbjct: 364 DYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDM 423
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
+ +G D +Y S + + G ++ + M A + + VY +L++G+ +N
Sbjct: 424 QQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEI 483
Query: 292 EGAQRVFEAIQFAGITPD 309
E + + G+ D
Sbjct: 484 EEVINLLRQMADMGVILD 501
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 102/217 (47%), Gaps = 16/217 (7%)
Query: 130 FMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNA 189
F + +R D + L ++ H + EL + + F +I K + GK Q A
Sbjct: 156 FCEAKRTD-----EALDILLH----RTPELGCVPDVFSYSI--LLKSLCDQGKSGQ---A 201
Query: 190 ENTLLAMKRRGFIC--DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMV 247
++ L M G +C D V + ++ + K G++ A + F+E+ G P D +Y S+V
Sbjct: 202 DDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVV 261
Query: 248 MAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGIT 307
A +A +D+ E LR+M + V + Y L+ GYS G + A RVF+ ++ I
Sbjct: 262 HALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSIL 321
Query: 308 PDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
PD ++L+ + G+ ++A F M G P+
Sbjct: 322 PDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPN 358
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 99/242 (40%), Gaps = 35/242 (14%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ YT +++GY K + + + M G D T V++ Y+ G L A F
Sbjct: 358 NVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIF 417
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++ G D +Y +++ A R G +D +M Q V Y L++G+ +
Sbjct: 418 NEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTH 477
Query: 289 GN--------SE---------------------------GAQRVFEAIQFAGITPDARMC 313
G+ SE AQ +F+ G+ P A +
Sbjct: 478 GSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVY 537
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
++L++ Y + G+ +KA F M AG+EP+D +++ K +++ L ++ +
Sbjct: 538 SMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQ 597
Query: 374 DG 375
G
Sbjct: 598 KG 599
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 100/239 (41%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
A++ E N Y +++GY K +I + M ++G + +++ +AG
Sbjct: 559 AMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAG 618
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
A+ F E+ G ++K +Y ++ + D L +E+ A V +
Sbjct: 619 RTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLN 678
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
++ G E A+ +F +I +G+ P +++I G ++A F +M+ A
Sbjct: 679 TMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNA 738
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
G EP + + ++ K+N++ RA +L ++ F + + L F G E
Sbjct: 739 GCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCRE 797
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 72/205 (35%), Gaps = 35/205 (17%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+GY Q + A M+R + D VTL++++ K G +K A + F+ +
Sbjct: 292 YNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMA 351
Query: 233 LLGEPLDKRSYGSM-----------------------------------VMAYVRAGMLD 257
+ G+ + SY M + AY GMLD
Sbjct: 352 MKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLD 411
Query: 258 RGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
+ ++ EM V Y+ ++ G + A F + G+ PD LI
Sbjct: 412 KAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLI 471
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLE 342
+ G KA + G+
Sbjct: 472 QGFCTHGSLLKAKELISEIMNNGMH 496
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 46/256 (17%), Positives = 104/256 (40%), Gaps = 2/256 (0%)
Query: 150 HPLYLQVAELA--LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVT 207
H L+ EL ++ +I ++ II+ K ++ +A+N G V
Sbjct: 477 HGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVV 536
Query: 208 LTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMD 267
++++ Y G ++ A F+ + G + YG++V Y + G +D G L REM
Sbjct: 537 YSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREML 596
Query: 268 AQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQ 327
+ + + +Y ++ G G + A+ F + +GI + +++
Sbjct: 597 QKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFD 656
Query: 328 KAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLA 387
+A F+ +R ++ + + +++ + ++ A + + R G + +
Sbjct: 657 EAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMI 716
Query: 388 AWFKRLGVVEEVEHVL 403
+ G+VEE E +
Sbjct: 717 TNLIKEGLVEEAEDMF 732
>gi|449440377|ref|XP_004137961.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like [Cucumis sativus]
gi|449483612|ref|XP_004156638.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like [Cucumis sativus]
Length = 736
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 4/184 (2%)
Query: 157 AELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFIC---DQVTLTVMVV 213
+E LL + + N R YT ++ GY + ++ + L AM+ +G D V+ T +V
Sbjct: 361 SEPPLLPKIYSPNSRIYTTLMKGYMNEGRVGDTIRMLEAMRNQGDRSSHPDHVSYTTVVS 420
Query: 214 MYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM-DAQEVY 272
KAG++ A + E+ +G P ++ +Y ++ Y R +D+ + L +EM D +
Sbjct: 421 ALVKAGSMDRARQVLAEMTRIGCPANRITYNILLKGYCRLLQMDKAKDLFKEMVDGAGIE 480
Query: 273 VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTA 332
Y ++ G + +S GA F ++ GI P L+ A+ +GQ + A
Sbjct: 481 PDVVSYNIMIDGSILVDDSAGALGFFNEMRSKGIAPTKVSYTTLMKAFAQSGQPKLARKV 540
Query: 333 FQNM 336
F M
Sbjct: 541 FDEM 544
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 95/234 (40%), Gaps = 25/234 (10%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAM-KRRGFICDQVTLTVMV----VMYSKAGNLK 222
AN Y ++ GY + +Q+ A++ M G D V+ +M+ ++ AG L
Sbjct: 445 ANRITYNILLKGYCRLLQMDKAKDLFKEMVDGAGIEPDVVSYNIMIDGSILVDDSAGALG 504
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM-DAQEVYVGSEVYKAL 281
F E++ G K SY +++ A+ ++G + EM + V V + L
Sbjct: 505 F----FNEMRSKGIAPTKVSYTTLMKAFAQSGQPKLARKVFDEMLNDPRVKVDIVAWNML 560
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK--- 338
+ GY G E A+++ + ++ G PD L N +A + +A + +++
Sbjct: 561 IEGYCRLGWIEEAKQLVQKMKENGFFPDVSTYGSLANGISLARKPGEALLLWNEVKERCA 620
Query: 339 ------------AGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGK 380
L+P + + + C + +ALE + +E +G K
Sbjct: 621 VRRGYKSDSSSPPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPNK 674
>gi|302769103|ref|XP_002967971.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
gi|300164709|gb|EFJ31318.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
Length = 1354
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 95/250 (38%), Gaps = 35/250 (14%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E N R + I H + + ++ A + M+ GF ++ +YS+
Sbjct: 731 LPEMGITPNSRTFVVIFHAFSRNGNLEEARSMYRQMREAGFSPSIQVFKALLALYSRETV 790
Query: 221 LKMAEETFEEIKLLGEPL-----------------------------------DKRSYGS 245
AEE ++IK G L D ++ +
Sbjct: 791 EIDAEELVKDIKKAGLELDMDIYNHMISLYSKLGSYRKAALVFKGMQEIGCSPDATTFNT 850
Query: 246 MVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAG 305
++M Y R M+ + LLREM Y L+ Y E A+ VF++I G
Sbjct: 851 LIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIAETG 910
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
PDA ++IN Y+ AG+ +K + M+ G EPS + +++ + K +A
Sbjct: 911 CKPDATAYNVMINVYRKAGEHRKIEEVIEQMKADGFEPSLTTIHMLMDSYGKGGATGKAE 970
Query: 366 EFLIDLERDG 375
E L L G
Sbjct: 971 EVLETLPEIG 980
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 101/240 (42%), Gaps = 1/240 (0%)
Query: 167 EANIRDYTKI-IHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
+A + D+ K+ + Y + A L M G D L V+ Y + G +A
Sbjct: 561 QAQVSDFLKVLVASYDRAGMQDEALARFLDMTTEGLEMDAEVLQTAVMCYCRKGFAFVAH 620
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
E + E D + +++ +Y + + E++ R++ + Y ALL Y
Sbjct: 621 ELLIDCLHAFEVKDSAMHVAIIASYGKLKLWQNAEIVFRDLQRHGFAGNTSAYSALLSAY 680
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
+ GN E A R + + AG+ P+A ++ A+ AG++++ +Q + + G+ P+
Sbjct: 681 AETGNFERATRALDNMVAAGLQPNAACANYVLEAFGRAGKAKELSEFYQRLPEMGITPNS 740
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ +I A + L A + GF + L A + R V + E ++++
Sbjct: 741 RTFVVIFHAFSRNGNLEEARSMYRQMREAGFSPSIQVFKALLALYSRETVEIDAEELVKD 800
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/199 (20%), Positives = 92/199 (46%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E+ F + Y ++H + + +I+ E M+ D++T M+ MY KAG +
Sbjct: 248 EQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGKAGMHR 307
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
AEE + ++K G D ++ ++ +AG ++ + +M +V + + A++
Sbjct: 308 KAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAMI 367
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
Y+ A+ + + AG+ PD +++++ + A +K ++ M +GL+
Sbjct: 368 CAYAKADMFSDAEHTYSCMLRAGVRPDLLAYSVMLDVFFKAEMPEKCIILYKAMVGSGLK 427
Query: 343 PSDKCVALILSACEKENQL 361
P A+++ +++ L
Sbjct: 428 PELSVYAIMVRVFYQKSSL 446
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 99/244 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L F N Y+ ++ Y + + A L M G + ++ + +AG
Sbjct: 661 LQRHGFAGNTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNAACANYVLEAFGRAGK 720
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
K E ++ + +G + R++ + A+ R G L+ + R+M +V+KA
Sbjct: 721 AKELSEFYQRLPEMGITPNSRTFVVIFHAFSRNGNLEEARSMYRQMREAGFSPSIQVFKA 780
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL YS A+ + + I+ AG+ D + +I+ Y G +KA F+ M++ G
Sbjct: 781 LLALYSRETVEIDAEELVKDIKKAGLELDMDIYNHMISLYSKLGSYRKAALVFKGMQEIG 840
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
P ++ + + A L ++ + G TL + + RL E+ E
Sbjct: 841 CSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAE 900
Query: 401 HVLR 404
V +
Sbjct: 901 LVFK 904
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 96/233 (41%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+ II YGK QNAE ++R GF + + ++ Y++ GN + A + +
Sbjct: 638 HVAIIASYGKLKLWQNAEIVFRDLQRHGFAGNTSAYSALLSAYAETGNFERATRALDNMV 697
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + ++ A+ RAG + + + S + + +S NGN E
Sbjct: 698 AAGLQPNAACANYVLEAFGRAGKAKELSEFYQRLPEMGITPNSRTFVVIFHAFSRNGNLE 757
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ ++ ++ AG +P ++ L+ Y A ++++KAGLE ++
Sbjct: 758 EARSMYRQMREAGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDMDIYNHMI 817
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
S K +A ++ G TL + R +V+E + +LRE
Sbjct: 818 SLYSKLGSYRKAALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLRE 870
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 93/209 (44%), Gaps = 4/209 (1%)
Query: 160 ALLEESFEANIR----DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
+LL++ + A +R Y +I ++ +A M+R+G D T M+ +Y
Sbjct: 171 SLLQDVYAAGLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVY 230
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
+AG ++ A F ++ G D +Y S++ A+ R G ++ E + M
Sbjct: 231 GRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDE 290
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
Y ++ Y G A+ ++ ++ G PD+ +LI+ AG +A F++
Sbjct: 291 ITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFED 350
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRA 364
M K+ + P+ + + ++ A K + + A
Sbjct: 351 MLKSQVRPTLQAFSAMICAYAKADMFSDA 379
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 82/204 (40%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+ +I Y + +Q A+ L M + G + T T ++ Y + + AE F+ I
Sbjct: 848 FNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIA 907
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y M+ Y +AG + E ++ +M A L+ Y G +
Sbjct: 908 ETGCKPDATAYNVMINVYRKAGEHRKIEEVIEQMKADGFEPSLTTIHMLMDSYGKGGATG 967
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ V E + G++PDA +IN++ A + M A + P+ + +
Sbjct: 968 KAEEVLETLPEIGMSPDAIHYTSIINSHLNNKDYLSAVIWLRKMTDACVRPTHVTITCFV 1027
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
A + + AL L L GF
Sbjct: 1028 GAASVCERSSHALMLLKALSEAGF 1051
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 83/203 (40%)
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G D +T ++ S L A FEE++ G D +Y +M+ Y RAG ++
Sbjct: 180 GLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAA 239
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+ R M Q + Y ++L ++ +G E +R+ ++ A + D +I+
Sbjct: 240 SSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHM 299
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
Y AG +KA + M++ G P +++ K +N A D+ +
Sbjct: 300 YGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPT 359
Query: 380 KEASCTLAAWFKRLGVVEEVEHV 402
+A + + + + + EH
Sbjct: 360 LQAFSAMICAYAKADMFSDAEHT 382
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 3/142 (2%)
Query: 266 MDAQEVYVGS--EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
D E +G+ +VY +L+ Y+ +G+ Q++ +Q G PD ++I A
Sbjct: 103 FDRAESSIGNCVQVYNSLMSVYARHGDWNSVQQLLCRMQDRGCRPDLVTFNIVIKARTRG 162
Query: 324 G-QSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEA 382
G Q A + Q++ AGL P ++SAC N+L+ A+ +++R G
Sbjct: 163 GMQEGLASSLLQDVYAAGLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWT 222
Query: 383 SCTLAAWFKRLGVVEEVEHVLR 404
+ + + R G VE + R
Sbjct: 223 YNAMISVYGRAGRVEAASSIFR 244
>gi|255566945|ref|XP_002524455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536243|gb|EEF37895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 486
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 122/304 (40%), Gaps = 18/304 (5%)
Query: 75 FTWIQIGPNIT--------EEQKQAISQFPRKMTKRCKAFVKQII--CVSPETGNLSDLL 124
+ ++Q P++T + KQ SQ + + ++I CV G+LS L
Sbjct: 19 YKFLQTHPSLTLLSTCKNLKTLKQIHSQVIKTGLHNTHFALSKLIEFCVISPYGDLSYAL 78
Query: 125 AAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKM 184
+ KP + W +++ L L E P+ + ++ F N Y ++ +
Sbjct: 79 LLFKSIGKPNQIIWNNIIRGLSLSESPILAIQYYVDMISSGFTPNTYTYPFVLKSCARIS 138
Query: 185 QIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYG 244
+ + + GF D T ++ MY + G L A FE + D SY
Sbjct: 139 STHEGKQIHGQILKLGFDNDAFVHTSLITMYVQNGELGNARLVFERSSM----RDVVSYT 194
Query: 245 SMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFA 304
+++ Y G LD+ L E+ ++V + A++ GY+ +G E A FE + A
Sbjct: 195 ALITGYASRGFLDQALELFDEIPVRDVV----SWNAMIAGYTQSGRFEEALIFFEEMLRA 250
Query: 305 GITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
+TP+ +++A +G + + + GLE + K + ++ K L A
Sbjct: 251 NVTPNMSTLLSVLSACAQSGSLKMGNWVSSWIEEHGLESNIKVMNALIDMYAKCGDLENA 310
Query: 365 LEFL 368
L
Sbjct: 311 LHLF 314
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 88/202 (43%), Gaps = 11/202 (5%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E E+NI+ +I Y K ++NA + +K + I + VM+ Y+ K
Sbjct: 284 EHGLESNIKVMNALIDMYAKCGDLENALHLFEGIKNKNVI----SWNVMIGGYTHLSCYK 339
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQ-EVYVGSEVYKAL 281
A F ++ + + S++ A G L G+ + +D + + ++ +L
Sbjct: 340 EALGLFRQMLQSNVEPNDVTLLSILPACANLGALGLGKWIHAYIDKNMKNLANNALWTSL 399
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMC-ALLINAYQMAGQSQKAYTAFQNMRKAG 340
+ Y+ GN E A ++F+ G+ P + +I+ + M GQ+ A + F M K G
Sbjct: 400 IDMYAKCGNIEVANQIFD-----GMNPKSLASWNAMISGFAMHGQADLAISLFSRMTKEG 454
Query: 341 LEPSDKCVALILSACEKENQLN 362
L P + +LSAC L+
Sbjct: 455 LVPDNITFIGVLSACNHAGLLD 476
>gi|115462947|ref|NP_001055073.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|50878350|gb|AAT85125.1| unknown protein, contains pentatricopeptide (PPR) repeat, PF01535
[Oryza sativa Japonica Group]
gi|113578624|dbj|BAF16987.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|215695094|dbj|BAG90285.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 793
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 96/210 (45%), Gaps = 1/210 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG-NLKMAEET 227
++R YT ++H + + + A ++R+G + VT V++ +Y + G +
Sbjct: 179 DVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVAL 238
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
EE++ G D + +++ A R G+LD+ ++ A+ Y ALL+ +
Sbjct: 239 LEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGK 298
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
GN A RV + ++ +G PDA L Y AG ++A M GL P+
Sbjct: 299 AGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFT 358
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFM 377
+++A +++ AL ++++G++
Sbjct: 359 YNTVMTAYANVGRVDEALALFDRMKKNGYV 388
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 105/244 (43%), Gaps = 12/244 (4%)
Query: 159 LALLEESFEANIR--DYT--KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
+ALLEE A + D+T +I G+ + A +K RG + VT ++ +
Sbjct: 236 VALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQV 295
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
+ KAGN A +E++ G D +Y + Y RAG + L M ++ +
Sbjct: 296 FGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPN 355
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTA-- 332
+ Y ++ Y+ G + A +F+ ++ G P+ L+ + M G+ + +TA
Sbjct: 356 TFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLI---FGMLGKKSR-FTAML 411
Query: 333 --FQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWF 390
+ M ++G P+ +L+ C K + L ++ G + ++ TL + +
Sbjct: 412 EMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAY 471
Query: 391 KRLG 394
R G
Sbjct: 472 GRCG 475
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 78/189 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y ++ Y ++ A MK+ G++ + T ++ M K E
Sbjct: 355 NTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEML 414
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
EE+ G ++ ++ +M+ + GM D +L M + V + + Y L+ Y
Sbjct: 415 EEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRC 474
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G+ A ++++ + +G TP L+N G A + M K G +P+D+
Sbjct: 475 GSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSY 534
Query: 349 ALILSACEK 357
+L+L K
Sbjct: 535 SLLLQCYAK 543
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 80/187 (42%)
Query: 185 QIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYG 244
+++ E +K +G+ D V M+ MY+K G A E F+ IK G D +Y
Sbjct: 581 RLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYN 640
Query: 245 SMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFA 304
S++ Y ++ E +L+++ + +V Y ++ G+ G + AQR+ +
Sbjct: 641 SLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIAD 700
Query: 305 GITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
G+ P L+ Y +A M L+P + ++ + K + + A
Sbjct: 701 GMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEA 760
Query: 365 LEFLIDL 371
EFL ++
Sbjct: 761 REFLSEI 767
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 1/129 (0%)
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAF-QNM 336
Y +L S G E A ++F ++ G+ P ++++ Y G+S A + M
Sbjct: 183 YTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEM 242
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVV 396
R AG+EP D + +++AC ++ L++A+ F DL+ G + L F + G
Sbjct: 243 RAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNY 302
Query: 397 EEVEHVLRE 405
E VL+E
Sbjct: 303 TEALRVLKE 311
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 80/202 (39%), Gaps = 2/202 (0%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLL-GEPLDKRSYGSMVMAYVRAGMLDRGEVL 262
D L ++V + G + + +E+ L G LD R+Y +++ A RAG +R L
Sbjct: 143 DAAALEMVVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQL 202
Query: 263 LREMDAQEVYVGSEVYKALLRGYSMNGNS-EGAQRVFEAIQFAGITPDARMCALLINAYQ 321
E+ Q V Y +L Y G S + E ++ AG+ PD + +I A
Sbjct: 203 FAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACG 262
Query: 322 MAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKE 381
G +A F++++ G P +L K AL L ++E G
Sbjct: 263 RDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAV 322
Query: 382 ASCTLAAWFKRLGVVEEVEHVL 403
LA + R G EE L
Sbjct: 323 TYNELAGTYARAGFFEEAAKCL 344
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/243 (18%), Positives = 106/243 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ F + Y +++ ++ A++ + M + GF + + ++++ Y+K GN
Sbjct: 487 MISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGN 546
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
E +E+ + ++V+A + L+ E +E+ AQ ++ +
Sbjct: 547 AAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNS 606
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+L Y+ NG A +F++I+ +G++PD L++ Y + +S +A + ++ +
Sbjct: 607 MLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQ 666
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
++P +++ K+ + A L ++ DG TL + L + E
Sbjct: 667 VKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAR 726
Query: 401 HVL 403
V+
Sbjct: 727 EVV 729
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 45/268 (16%), Positives = 89/268 (33%), Gaps = 35/268 (13%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ +GK A L M+ G D VT + Y++AG + A + + +
Sbjct: 289 YNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMT 348
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +Y +++ AY G +D L M Y +
Sbjct: 349 SKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFT 408
Query: 293 GAQRVFEAIQFAGITPD--------------------------ARMCAL---------LI 317
+ E + +G TP+ + C + LI
Sbjct: 409 AMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLI 468
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
+AY G A+ + M +G P +L+ ++ + A + + ++GF
Sbjct: 469 SAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFK 528
Query: 378 VGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ L + + G +E + +E
Sbjct: 529 PNDQSYSLLLQCYAKGGNAAGIESIEKE 556
>gi|399216092|emb|CCF72780.1| unnamed protein product [Babesia microti strain RI]
Length = 1520
Score = 70.5 bits (171), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/195 (23%), Positives = 88/195 (45%), Gaps = 1/195 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I G+G+ Q+ A N L M G + + +T ++ ++ G++ A E++
Sbjct: 1017 YSTLIKGFGQTKQLNKALNIYLTMLDEGVVPNTITYNSIIDACARVGDMNKAANLLEDML 1076
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
D ++ +++ Y +DR LLR M + + +Y +LL G +G
Sbjct: 1077 NNNIEPDLITFSTVIKGYCVQSNMDRSLQLLRAMSERGIKPDGILYNSLLDGCVKSGRPW 1136
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM-RKAGLEPSDKCVALI 351
Q++++ +Q GI P +LI Y GQ KA+ + RK ++ + +
Sbjct: 1137 LCQQLWDEMQENGIAPSNFTLTILIKMYGRLGQLDKAFQLMDELPRKYNIQTNTHVYTCL 1196
Query: 352 LSACEKENQLNRALE 366
+SAC + AL+
Sbjct: 1197 MSACITNGKYKMALD 1211
Score = 55.5 bits (132), Expect = 5e-05, Method: Composition-based stats.
Identities = 40/181 (22%), Positives = 80/181 (44%), Gaps = 2/181 (1%)
Query: 197 KRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEI-KLLGEPLDKRSYGSMVMAYVRAGM 255
K+ GF D T +++ +S + N+ + E+ L G L++ +YG M A V M
Sbjct: 934 KKFGFHPDLQTYGLLIKFFSSSDNVMECFHLWNEMTSLYGYELNEVTYGCMFDALVSNNM 993
Query: 256 LDRGEVLLREMDAQE-VYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
LD LL++M + + +Y L++G+ A ++ + G+ P+
Sbjct: 994 LDEALSLLKDMKKNSNIKPNTIIYSTLIKGFGQTKQLNKALNIYLTMLDEGVVPNTITYN 1053
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
+I+A G KA ++M +EP + ++ ++ ++R+L+ L +
Sbjct: 1054 SIIDACARVGDMNKAANLLEDMLNNNIEPDLITFSTVIKGYCVQSNMDRSLQLLRAMSER 1113
Query: 375 G 375
G
Sbjct: 1114 G 1114
Score = 50.8 bits (120), Expect = 0.001, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 78/179 (43%), Gaps = 8/179 (4%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + E ++ ++ +I GY + + + L AM RG D + ++ K+G
Sbjct: 1075 MLNNNIEPDLITFSTVIKGYCVQSNMDRSLQLLRAMSERGIKPDGILYNSLLDGCVKSGR 1134
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQ-EVYVGSEVYK 279
+ ++ ++E++ G + ++ Y R G LD+ L+ E+ + + + VY
Sbjct: 1135 PWLCQQLWDEMQENGIAPSNFTLTILIKMYGRLGQLDKAFQLMDELPRKYNIQTNTHVYT 1194
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA-------YQMAGQSQKAYT 331
L+ NG + A VF + GI PD++ +I YQ+ + AYT
Sbjct: 1195 CLMSACITNGKYKMALDVFNCMNGNGIVPDSKTYETIIFGAIKGRLLYQVIDIIKAAYT 1253
>gi|410110103|gb|AFV61131.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
alba]
Length = 419
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 95/201 (47%), Gaps = 4/201 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 219 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDR 278
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ + +M++AY RAG++ + LL E+ + + + +L
Sbjct: 279 AAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDTAIHILA 337
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + F MR G P
Sbjct: 338 G---AGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYXNVVEVFDKMRGLGYFP 394
Query: 344 SDKCVALILSACEKENQLNRA 364
+A++L+A K + ++A
Sbjct: 395 DSNVIAVVLNAYGKLQEFDKA 415
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 102/237 (43%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 119 NTSSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 178
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 179 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 238
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G+E
Sbjct: 239 LEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILF 298
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE +V R+
Sbjct: 299 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAG----AGRIEEATYVFRQ 351
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 102/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + MK G + + + + ++ MY + A
Sbjct: 81 FTPDLVAYNAMINVFGKAKLFREARSLIGEMKTAGVMPNTSSYSTLLTMYVENKKFLEAL 140
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 141 SVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 200
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + ++ Y + +KA Q M+ G+E
Sbjct: 201 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIE 257
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 258 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRL 317
Query: 403 LRE 405
L E
Sbjct: 318 LHE 320
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ A + L M++ D V + ++ + K + A F +K
Sbjct: 18 YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIAIFSRLK 77
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +M+ + +A + L+ EM V + Y LL Y N
Sbjct: 78 RSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKTAGVMPNTSSYSTLLTMYVENKKFL 137
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF ++ D C ++I+ Y G +++A F MRK G+EP+
Sbjct: 138 EALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 189
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 33/183 (18%), Positives = 81/183 (44%), Gaps = 2/183 (1%)
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
F+E++ D+ +Y +++ + + G+ D L++M+ V +Y L+
Sbjct: 3 FDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRK 62
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
+ A +F ++ +G TPD +IN + A ++A + M+ AG+ P+
Sbjct: 63 LCDYSKAIAIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKTAGVMPNTSS 122
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYG 407
+ +L+ + + AL ++ ++ + + +LG+ +E + + +G
Sbjct: 123 YSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF--WG 180
Query: 408 LRE 410
+R+
Sbjct: 181 MRK 183
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 111/270 (41%), Gaps = 10/270 (3%)
Query: 153 YLQVAELALLEESFEA--------NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICD 204
Y ++ EL + FE N YT +IHG+ + +I A MK G D
Sbjct: 235 YCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPD 294
Query: 205 QVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLR 264
T TV+V + + G A + FEE+ G + +Y ++ + + G +D G +L
Sbjct: 295 VPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLS 354
Query: 265 EMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAG 324
M + + + AL+ GY G E A V ++++ + P++R LI +
Sbjct: 355 TMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKK 414
Query: 325 QSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASC 384
+A M + L P+ ++ K ++ A + +DGF+ + C
Sbjct: 415 SMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFC 474
Query: 385 TLAAWFKRLGVVEEVEHVLREYGLRETYSK 414
++G VE+ V L+E +++
Sbjct: 475 AFIDCLCKMGKVEQAHQVFE--SLKEKHAE 502
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 77/184 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + E N+ + +++ + K + A+ + + GF CD T T +++ Y K
Sbjct: 181 MLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHE 240
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A + FE + G ++ SY +++ + G +D L +M + Y
Sbjct: 241 LGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTV 300
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ + G A + FE + GI P+ +LI+ + G+ + M + G
Sbjct: 301 LVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKG 360
Query: 341 LEPS 344
L S
Sbjct: 361 LVSS 364
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 1/198 (0%)
Query: 155 QVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
QV E +L E+ EAN YT +I GY K + +A M G + +T V++
Sbjct: 491 QVFE-SLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDG 549
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
K G ++ A + + +Y ++ +R DR + L +M +
Sbjct: 550 LRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPN 609
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
Y A ++ Y G A+ + I+ GI D+ + +L+NAY GQ A+
Sbjct: 610 VVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLI 669
Query: 335 NMRKAGLEPSDKCVALIL 352
M G EPS + +++L
Sbjct: 670 RMFDTGCEPSRQTYSILL 687
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 85/199 (42%), Gaps = 1/199 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E E N+ YT +I + K ++ L M +G + V ++ Y K G
Sbjct: 321 MVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGM 380
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ A + +KL + R+Y ++ + R +DR LL +M ++ Y
Sbjct: 381 MEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNT 440
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G + A R+ + G PD R I+ G+ ++A+ F+++++
Sbjct: 441 LIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKH 500
Query: 341 LEPSDKC-VALILSACEKE 358
E ++ ALI C+ E
Sbjct: 501 AEANEFLYTALIDGYCKAE 519
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 91/224 (40%), Gaps = 4/224 (1%)
Query: 159 LALLEESFE----ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
+ALL + +E N+ Y +IHG K + +A M + GF+ DQ T +
Sbjct: 420 MALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDC 479
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
K G ++ A + FE +K ++ Y +++ Y +A +L + M + +
Sbjct: 480 LCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPN 539
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
S + LL G G E A + + + P +LI +A
Sbjct: 540 SITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLD 599
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMV 378
M +G +P+ + A ++ +L A E ++ ++ +G ++
Sbjct: 600 QMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILL 643
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 94/261 (36%), Gaps = 26/261 (9%)
Query: 170 IRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFE 229
+ YT +I ++ A L M G + VT T + Y + G L AEE
Sbjct: 575 VHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVV 634
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR------ 283
+IK G LD Y +V AY G LD +L M + Y LL+
Sbjct: 635 KIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEK 694
Query: 284 ----GYSMNGNS----------------EGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
G ++ NS E +FE + G P+ + LI
Sbjct: 695 YNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKV 754
Query: 324 GQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEAS 383
A+ F +M+++G+ PS+ +LS+C K AL L + + E+
Sbjct: 755 EHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESY 814
Query: 384 CTLAAWFKRLGVVEEVEHVLR 404
L G E+ E + R
Sbjct: 815 KLLVCGLFEQGNQEKAEEIFR 835
>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
Length = 1014
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 102/244 (41%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
E N Y +IH K+ I++A M+ +G ++ Y K G+L A
Sbjct: 369 LEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRAR 428
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+ G SY ++ R G L L REM + + + + AL+ G+
Sbjct: 429 GLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGF 488
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
+ + A R+F+ + + + P+ ++I Y + G +KA+ + M + GL+P +
Sbjct: 489 CKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDN 548
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++S + +++A EF+ DLE ++ + L R G E H+ E
Sbjct: 549 YTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDE 608
Query: 406 YGLR 409
+R
Sbjct: 609 MAVR 612
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/214 (19%), Positives = 91/214 (42%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E N +T +I+G+ K ++ A M I ++VT VM+ Y GN++
Sbjct: 471 ERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIR 530
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A + ++++ +G D +Y S++ + + + +++ + + ALL
Sbjct: 531 KAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALL 590
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G G +++ + G+ D +++ A +K+ F+ M++ G++
Sbjct: 591 YGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVK 650
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
P D ++ A KE + +AL + DG+
Sbjct: 651 PDDIFYTCMIDALSKEENMIQALNCWDQMVIDGY 684
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 101/246 (41%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
E +A+ Y +++G K M++Q A M G D+VT +V + + L+M
Sbjct: 227 EGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEM 286
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A ++ LG + + M+ + +++ L ++ + Y AL+
Sbjct: 287 ALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALID 346
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
N + A R+F+ + G+ P+ A+LI+A G + A F MR G++
Sbjct: 347 KLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKV 406
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+ +++ K+ L+RA L + ++G + L A R G + +
Sbjct: 407 TVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELH 466
Query: 404 REYGLR 409
RE R
Sbjct: 467 REMAER 472
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 5/205 (2%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I K+ + A N M G+ + VT TV++ K+G L AE +E+
Sbjct: 656 YTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEM- 714
Query: 233 LLGEPL-DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV-YKALLRGYSMNGN 290
L G L +K +Y + + G +++ + L M + ++ S V + L++G G
Sbjct: 715 LAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM--LQGHLASIVSFNILIKGLCKAGK 772
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
+ A + I +G +PD + +I+ G KA+ + M GL+P +
Sbjct: 773 IQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNI 832
Query: 351 ILSACEKENQLNRALEFLIDLERDG 375
+ C + ++AL ++ R G
Sbjct: 833 FIRWCNVHGESDKALGIYTNMIRSG 857
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 68/168 (40%)
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G +Q T + ++ K +A + F+++ G LD+ Y + + AY + LD
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
L+ M+++ V + Y L+ G N + A V + G+T D L+
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
+ + + A +M + G PS+ + ++ K+ + A
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSL 325
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/181 (17%), Positives = 76/181 (41%), Gaps = 1/181 (0%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ + N +T +I+ K + +AE M + ++ T + ++ G+++
Sbjct: 682 DGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEK 741
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A++ + L G S+ ++ +AG + L+R++ Y ++
Sbjct: 742 AKDLHSAM-LQGHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIH 800
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G+ A ++ + + G+ PD + I + G+S KA + NM ++G++P
Sbjct: 801 ELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQP 860
Query: 344 S 344
+
Sbjct: 861 N 861
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 41/227 (18%), Positives = 90/227 (39%), Gaps = 35/227 (15%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMV-------------VMYSKAG 219
Y +++G+ + +++ A M R GF+ + + M+ + K G
Sbjct: 271 YRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLG 330
Query: 220 NLKM----------------------AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLD 257
+L M A+ F+E+ G ++ +Y ++ A + GM++
Sbjct: 331 DLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIE 390
Query: 258 RGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
L +M + + V Y +L+ GY G+ + A+ + + G+TP A + LI
Sbjct: 391 DALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLI 450
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
G A + M + G+ ++ +++ K+ +++ A
Sbjct: 451 AGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEA 497
>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
Length = 820
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 83/172 (48%), Gaps = 4/172 (2%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+ +I GY + Q++ A + M RGF D V+ ++ + +AG + A E F E+
Sbjct: 167 FNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMT 226
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+P D ++ ++V AG + G +L++M + Y AL+ + +E
Sbjct: 227 ---QP-DMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAE 282
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A+++ + +G+ P C +++NAY G+ A F++MR G EP+
Sbjct: 283 EAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPN 334
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 85/216 (39%), Gaps = 35/216 (16%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E + R Y ++ + ++ + + AE L M G + VT T++V Y + G +
Sbjct: 258 ELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMS 317
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A FE ++ G + +Y ++V + AG + + LL +M V Y L+
Sbjct: 318 GAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLI 377
Query: 283 RGYSMNGNSEGAQRV-----------------------------------FEAIQFAGIT 307
RG ++G+ A R+ F+ +++ GI
Sbjct: 378 RGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIR 437
Query: 308 PDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
P++ +IN AG+ A T +NM AG P
Sbjct: 438 PNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAP 473
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/187 (19%), Positives = 73/187 (39%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E N+ Y I+ G+ ++ A L M+ G D VT +++ G++ A
Sbjct: 332 EPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFR 391
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
++ G D+ +Y ++ A + G +D L ++ + + S + ++ G
Sbjct: 392 LLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLC 451
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G + A E + AG PD + I SQ+ M + ++PS
Sbjct: 452 KAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTV 511
Query: 347 CVALILS 353
++++
Sbjct: 512 NYTIVIN 518
Score = 38.1 bits (87), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 45/106 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L++ + + +YT +I+ + A M +G D VT T V Y G
Sbjct: 501 MLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGR 560
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
L AE E+K +D +Y +++ + G DR +L+ M
Sbjct: 561 LDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHM 606
>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 86/189 (45%), Gaps = 4/189 (2%)
Query: 155 QVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
Q+ +L + + F ++ Y +I+G+ K ++ + M +RG + D VT ++
Sbjct: 300 QILDLMVTKGCF-PDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQG 358
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
Y +AG A+E F +G + R+Y ++ +++ VL M E+ +
Sbjct: 359 YFQAGRPDAAQEIFSR---MGSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELD 415
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
Y ++ G M GN E A +F ++ F G+ PD +I+ + KA ++
Sbjct: 416 ITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYR 475
Query: 335 NMRKAGLEP 343
M++ GL P
Sbjct: 476 KMQEDGLLP 484
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 92/217 (42%), Gaps = 3/217 (1%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + ++ Y +IHG Q+ A+ L M +G D VT ++ + K
Sbjct: 270 MIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKR 329
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ + E+ G +D ++ +++ Y +AG D + + M ++ Y
Sbjct: 330 VDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRMGSRP---NIRTYSI 386
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL G N E A +FE++Q + + D ++I+ M G + A+ F ++ G
Sbjct: 387 LLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKG 446
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
LEP ++S ++ ++A ++ DG +
Sbjct: 447 LEPDVVTYTTMISGFCRKRLWDKADFLYRKMQEDGLL 483
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 46/256 (17%), Positives = 104/256 (40%), Gaps = 3/256 (1%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ +E ++ + +I+G+ + ++ A + + M+ D V ++ + K G
Sbjct: 130 MMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGL 189
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A F ++ G D +Y S+V +G L+R+M +++ + A
Sbjct: 190 VNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTA 249
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ + G A++ +E + I PD +I+ M GQ +A M G
Sbjct: 250 LINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKG 309
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
P +++ K +++ + + ++ + G +V T+ + + G + +
Sbjct: 310 CFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQ 369
Query: 401 HVLREYGLR---ETYS 413
+ G R TYS
Sbjct: 370 EIFSRMGSRPNIRTYS 385
>gi|410110129|gb|AFV61144.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
pusilla]
Length = 381
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 100/212 (47%), Gaps = 4/212 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 174 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDR 233
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ + +M++ Y RAG++ + LL E+ + + + +L
Sbjct: 234 AAMLFQKLRSTGVEIDQILFQTMIVXYERAGLIAHAKRLLHELKRPD-NIPRDTAIHILA 292
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + F MR G P
Sbjct: 293 G---AGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYANVVEVFDKMRGLGYFP 349
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDG 375
+A++L+A K + ++A + ++++ G
Sbjct: 350 DSNVIAVVLNAYGKLQEFDKANDVYMEMQEVG 381
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + MK G + + + + ++ MY + A
Sbjct: 36 FTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEAL 95
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 96 SVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 155
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + ++ Y + +KA Q M+ G+E
Sbjct: 156 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIE 212
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G++ + +
Sbjct: 213 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSTGVEIDQILFQTMIVXYERAGLIAHAKRL 272
Query: 403 LRE 405
L E
Sbjct: 273 LHE 275
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 100/237 (42%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 74 NTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 133
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 134 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 193
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R G+E
Sbjct: 194 LEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSTGVEIDQILF 253
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ E+ + A L +L+R + A LA G +EE +V R+
Sbjct: 254 QTMIVXYERAGLIAHAKRLLHELKRPDNIPRDTAIHILAGA----GRIEEATYVFRQ 306
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 60/141 (42%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D V + ++ + K + A F +K G D +Y +M+ + +A + L+
Sbjct: 4 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 63
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
EM V + Y LL Y N A VF ++ D C ++I+ Y
Sbjct: 64 SEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 123
Query: 324 GQSQKAYTAFQNMRKAGLEPS 344
G +++A F MRK G+EP+
Sbjct: 124 GMAKEADKLFWGMRKMGIEPN 144
>gi|359490016|ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Vitis vinifera]
Length = 1442
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 91/200 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +++ + ++ + + M + GF D++T ++ MY K G +A + + ++K
Sbjct: 367 YNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMK 426
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
L G D +Y ++ + +A M+ ++ EM V + AL+ GY+ G
Sbjct: 427 LSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALICGYAKAGKRV 486
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ F+ + +GI PD +++++ +S KA +Q M +P ++L
Sbjct: 487 EAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVML 546
Query: 353 SACEKENQLNRALEFLIDLE 372
KEN+ + + D+E
Sbjct: 547 RVLGKENREEDVHKVVKDME 566
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/211 (18%), Positives = 98/211 (46%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F+ ++ + ++ Y + ++ G D+ T +++MY + +
Sbjct: 918 FKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGL 977
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
E++ +G +Y S++ A+ + M+++ E L + ++E + Y +++ +
Sbjct: 978 SLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMF 1037
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
+GN A+++ ++ AG+ P LL+ +Y +GQ ++A N++ GL S
Sbjct: 1038 RNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLST 1097
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGF 376
+ ++ A K N A++ L+++++DG
Sbjct: 1098 LPYSSVIDAYLKNGDHNVAIQKLMEMKKDGL 1128
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 86/195 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I YG+ + A ++ +GF+ D VT ++ +++ GN+ +E E++
Sbjct: 332 YNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMV 391
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+G D+ +Y +++ Y + G D L +M + Y L+ +
Sbjct: 392 KMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIK 451
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A V + A + P R + LI Y AG+ +A F M ++G++P +++L
Sbjct: 452 EAAEVMSEMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVML 511
Query: 353 SACEKENQLNRALEF 367
+ N+ +A++
Sbjct: 512 DILLRFNESGKAMKL 526
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 79/176 (44%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
++R G D +T ++ S+ NL+ A + + ++ D +Y +M+ Y R GM
Sbjct: 285 VRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGM 344
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
L ++++++ + Y +LL ++ GN + + + E + G D
Sbjct: 345 SREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNT 404
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDL 371
+I+ Y GQ A+ + +M+ +G P +++ + K N + A E + ++
Sbjct: 405 IIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEM 460
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 90/224 (40%), Gaps = 2/224 (0%)
Query: 154 LQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVV 213
L V A E + ++ Y ++ Y + + + L M+ RG D V+ ++
Sbjct: 206 LAVEIFARAEAASGNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLIN 265
Query: 214 MYSKAGNL--KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
K+G + +A E E++ G D +Y +++ A R L+ + +M A
Sbjct: 266 ARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRC 325
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
Y A++ Y G S A R+F+ ++ G PDA L+ A+ G K
Sbjct: 326 QPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKE 385
Query: 332 AFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
++M K G + I+ K Q + A + D++ G
Sbjct: 386 ICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSG 429
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 83/175 (47%), Gaps = 12/175 (6%)
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
GF + ++T+M+ ++ AGN+ ++ ++ +K G + +M + + G+L +G
Sbjct: 847 GFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAG------YFPTMHLYRIMIGLLAKG 900
Query: 260 ------EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
E ++ EM+ ++ ++L+ Y+ G+ + +V++ IQ AG+ PD
Sbjct: 901 KRVRDVEAMVSEMEVARFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTY 960
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFL 368
LI Y + ++ + MR+ GLEP ++SA K + +A E
Sbjct: 961 NTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELF 1015
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 102/249 (40%), Gaps = 3/249 (1%)
Query: 129 RFMKPRRADWLAVLKQLK-LMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQ 187
RF KP + W +VLK + + QV +L + E + + Y +I Y + + +
Sbjct: 917 RF-KPDLSIWNSVLKLYTGIGDFKKTGQVYQL-IQEAGLKPDEDTYNTLILMYCRDRRPE 974
Query: 188 NAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMV 247
+ + M+R G T ++ + K ++ AEE FE + LD+ Y M+
Sbjct: 975 EGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMM 1034
Query: 248 MAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGIT 307
+ +G + E LL M V L+ YS +G E A++V + ++ G+
Sbjct: 1035 KMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLP 1094
Query: 308 PDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
+ +I+AY G A M+K GLEP + + A + A+
Sbjct: 1095 LSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRIWTCFVRAASLSQHTSEAIVL 1154
Query: 368 LIDLERDGF 376
L L GF
Sbjct: 1155 LKALRDTGF 1163
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 97/228 (42%), Gaps = 14/228 (6%)
Query: 159 LALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
L+L+ E E + Y +I +GK ++ AE + + D+ +M+ M
Sbjct: 977 LSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKM 1036
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
+ +GN AE+ +K G + ++++Y +G + E +L + + + +
Sbjct: 1037 FRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLS 1096
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+ Y +++ Y NG+ A + ++ G+ PD R+ + A ++ + +A +
Sbjct: 1097 TLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRIWTCFVRAASLSQHTSEAIVLLK 1156
Query: 335 NMRKAGL--------EPSDKCVALILSACEKENQL--NRALEFLIDLE 372
+R G E SD V+ + + EK L N A F+ LE
Sbjct: 1157 ALRDTGFDLPIRLLTEKSDSLVSEVDNCLEKLGPLEDNAAFNFVNALE 1204
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 92/204 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I K ++++ E + M+ F D ++ +Y+ G+ K + ++ I+
Sbjct: 890 YRIMIGLLAKGKRVRDVEAMVSEMEVARFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQ 949
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D+ +Y ++++ Y R + G L+ EM + + YK+L+ + E
Sbjct: 950 EAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVE 1009
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ +FE + D +++ ++ +G KA M++AG+EP+ + L++
Sbjct: 1010 QAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLM 1069
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
+ Q A + L +L+ +G
Sbjct: 1070 VSYSGSGQPEEAEKVLDNLKVEGL 1093
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/290 (19%), Positives = 116/290 (40%), Gaps = 41/290 (14%)
Query: 150 HPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLT 209
H L Q E LL + ++ +T +I YGK Q AE+ + +++++ + D+
Sbjct: 731 HYLIDQAEEKGLLFD----DVSIHTGVIEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWN 786
Query: 210 VMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQ 269
++ Y+ +G + A F + G S ++ A + G LD V+++E+
Sbjct: 787 ALIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQELQDM 846
Query: 270 EVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA---------- 319
+ +L ++ GN +++++ ++ AG P + ++I
Sbjct: 847 GFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDV 906
Query: 320 -------------------------YQMAGQSQKAYTAFQNMRKAGLEPS-DKCVALILS 353
Y G +K +Q +++AGL+P D LIL
Sbjct: 907 EAMVSEMEVARFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILM 966
Query: 354 ACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
C ++ + L + ++ R G + +L + F +L +VE+ E +
Sbjct: 967 YC-RDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELF 1015
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 35/175 (20%), Positives = 73/175 (41%), Gaps = 5/175 (2%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVV-MYSKAGNLKMAEETFEEI 231
Y ++ Y K + A + + +G + D V++ V+ Y K + AE +
Sbjct: 714 YRSMVVTYCKMGFPETAHYLIDQAEEKGLLFDDVSIHTGVIEAYGKLKLWQKAESLVGSL 773
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM--DAQEVYVGSEVYKALLRGYSMNG 289
+ +D++ + +++ AY +G +R + M D V S L++ ++G
Sbjct: 774 RQKCTMVDRKVWNALIHAYAASGCYERARAIFNTMMRDGPSPTVDS--VNGLMQALIVDG 831
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
+ V + +Q G L+++A+ AG + +Q M+ AG P+
Sbjct: 832 RLDELYVVIQELQDMGFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAGYFPT 886
>gi|125551633|gb|EAY97342.1| hypothetical protein OsI_19265 [Oryza sativa Indica Group]
Length = 793
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 96/210 (45%), Gaps = 1/210 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG-NLKMAEET 227
++R YT ++H + + + A ++R+G + VT V++ +Y + G +
Sbjct: 179 DVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVAL 238
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
EE++ G D + +++ A R G+LD+ ++ A+ Y ALL+ +
Sbjct: 239 LEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGK 298
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
GN A RV + ++ +G PDA L Y AG ++A M GL P+
Sbjct: 299 AGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFT 358
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFM 377
+++A +++ AL ++++G++
Sbjct: 359 YNTVMTAYANVGRVDEALALFDRMKKNGYV 388
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 105/244 (43%), Gaps = 12/244 (4%)
Query: 159 LALLEESFEANIR--DYT--KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
+ALLEE A + D+T +I G+ + A +K RG + VT ++ +
Sbjct: 236 VALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQV 295
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
+ KAGN A +E++ G D +Y + Y RAG + L M ++ +
Sbjct: 296 FGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPN 355
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTA-- 332
+ Y ++ Y+ G + A +F+ ++ G P+ L+ + M G+ + +TA
Sbjct: 356 TFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLI---FGMLGKKSR-FTAML 411
Query: 333 --FQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWF 390
+ M ++G P+ +L+ C K + L ++ G + ++ TL + +
Sbjct: 412 EMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAY 471
Query: 391 KRLG 394
R G
Sbjct: 472 GRCG 475
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 78/189 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y ++ Y ++ A MK+ G++ + T ++ M K E
Sbjct: 355 NTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEML 414
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
EE+ G ++ ++ +M+ + GM D +L M + V + + Y L+ Y
Sbjct: 415 EEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRC 474
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G+ A ++++ + +G TP L+N G A + M K G +P+D+
Sbjct: 475 GSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSY 534
Query: 349 ALILSACEK 357
+L+L K
Sbjct: 535 SLLLQCYAK 543
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 80/187 (42%)
Query: 185 QIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYG 244
+++ E +K +G+ D V M+ MY+K G A E F+ IK G D +Y
Sbjct: 581 RLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYN 640
Query: 245 SMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFA 304
S++ Y ++ E +L+++ + +V Y ++ G+ G + AQR+ +
Sbjct: 641 SLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIAD 700
Query: 305 GITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
G+ P L+ Y +A M L+P + ++ + K + + A
Sbjct: 701 GMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEA 760
Query: 365 LEFLIDL 371
EFL ++
Sbjct: 761 REFLSEI 767
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 1/129 (0%)
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAF-QNM 336
Y +L S G E A ++F ++ G+ P ++++ Y G+S A + M
Sbjct: 183 YTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEM 242
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVV 396
R AG+EP D + +++AC ++ L++A+ F DL+ G + L F + G
Sbjct: 243 RAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNY 302
Query: 397 EEVEHVLRE 405
E VL+E
Sbjct: 303 TEALRVLKE 311
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 80/202 (39%), Gaps = 2/202 (0%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLL-GEPLDKRSYGSMVMAYVRAGMLDRGEVL 262
D L ++V + G + + +E+ L G LD R+Y +++ A RAG +R L
Sbjct: 143 DAAALEMVVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQL 202
Query: 263 LREMDAQEVYVGSEVYKALLRGYSMNGNS-EGAQRVFEAIQFAGITPDARMCALLINAYQ 321
E+ Q V Y +L Y G S + E ++ AG+ PD + +I A
Sbjct: 203 FAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACG 262
Query: 322 MAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKE 381
G +A F++++ G P +L K AL L ++E G
Sbjct: 263 RDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAV 322
Query: 382 ASCTLAAWFKRLGVVEEVEHVL 403
LA + R G EE L
Sbjct: 323 TYNELAGTYARAGFFEEAAKCL 344
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/243 (18%), Positives = 106/243 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ F + Y +++ ++ A++ + M + GF + + ++++ Y+K GN
Sbjct: 487 MISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGN 546
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
E +E+ + ++V+A + L+ E +E+ AQ ++ +
Sbjct: 547 AAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNS 606
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+L Y+ NG A +F++I+ +G++PD L++ Y + +S +A + ++ +
Sbjct: 607 MLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQ 666
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
++P +++ K+ + A L ++ DG TL + L + E
Sbjct: 667 VKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAR 726
Query: 401 HVL 403
V+
Sbjct: 727 EVV 729
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 45/268 (16%), Positives = 89/268 (33%), Gaps = 35/268 (13%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ +GK A L M+ G D VT + Y++AG + A + + +
Sbjct: 289 YNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMT 348
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +Y +++ AY G +D L M Y +
Sbjct: 349 SKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFT 408
Query: 293 GAQRVFEAIQFAGITPD--------------------------ARMCAL---------LI 317
+ E + +G TP+ + C + LI
Sbjct: 409 AMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLI 468
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
+AY G A+ + M +G P +L+ ++ + A + + ++GF
Sbjct: 469 SAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFK 528
Query: 378 VGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ L + + G +E + +E
Sbjct: 529 PNDQSYSLLLQCYAKGGNAAGIESIEKE 556
>gi|307110337|gb|EFN58573.1| hypothetical protein CHLNCDRAFT_140730 [Chlorella variabilis]
Length = 926
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 90/204 (44%), Gaps = 3/204 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++H G Q+Q + M+RRG D VT ++ + GN++ A TF ++
Sbjct: 375 YNALLHLLGSIGQLQRSLGVYRGMRRRGPAPDVVTYNTLIAAAAHGGNVQAAMRTFSDMV 434
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+R+ G+++ Y +A + M V E+Y +L+ G +
Sbjct: 435 DADIEPTERTAGALLHCYAKARDAASARRVFEGMAQLGVRPNLEIYTSLIDACVQAGGKQ 494
Query: 293 GAQRVF---EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
Q F E ++ G+ P A L+ A + AG +A+ ++ G+ PSD+
Sbjct: 495 WTQFAFQLVEEMRREGLAPSAVTYGCLLAACEKAGDVTRAFALYKQACDEGVAPSDQMHD 554
Query: 350 LILSACEKENQLNRALEFLIDLER 373
+++S C + +L A++ + L R
Sbjct: 555 MLISMCTEAERLEEAVDLVKRLAR 578
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 57/138 (41%), Gaps = 3/138 (2%)
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI 301
+Y +++ G L R + R M + Y L+ + GN + A R F +
Sbjct: 374 AYNALLHLLGSIGQLQRSLGVYRGMRRRGPAPDVVTYNTLIAAAAHGGNVQAAMRTFSDM 433
Query: 302 QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEK---E 358
A I P R L++ Y A + A F+ M + G+ P+ + ++ AC + +
Sbjct: 434 VDADIEPTERTAGALLHCYAKARDAASARRVFEGMAQLGVRPNLEIYTSLIDACVQAGGK 493
Query: 359 NQLNRALEFLIDLERDGF 376
A + + ++ R+G
Sbjct: 494 QWTQFAFQLVEEMRREGL 511
Score = 38.1 bits (87), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 75/163 (46%), Gaps = 7/163 (4%)
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
GN + A+E ++ G D +Y S++ A AG+L RE+ A + + Y
Sbjct: 155 GNWEAAQEVVSIMEREGIQRDVITYNSLIKAAAAAGLLPHAVRTYRELAAAGLRPTTFTY 214
Query: 279 KALLRGYSM--NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA----GQSQKAYTA 332
AL + +G++ R ++ ++ AG+ P+ + + L +A A Q + + A
Sbjct: 215 AALFTAAAKARHGDAAWLLRTWDEMEAAGVAPNNYVVSALFSAASHAPCTPAQLDRLFAA 274
Query: 333 FQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+R G P+D +L+ +++ RA++ +++DG
Sbjct: 275 LALLRSFG-PPNDTVYTSLLTLIQRQAIQERAVDVWTAVKQDG 316
>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
Length = 532
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 92/217 (42%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
++++ N+ Y ++HGY K + N + M + G D + + Y K G
Sbjct: 251 SMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCG 310
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
L A TF +++ G D SYG+M+ + G LD +M + V+
Sbjct: 311 RLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFT 370
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ G+SM G E A+ +F + GI P + +I+ G+ +A T F M A
Sbjct: 371 NLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIA 430
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
++P+ I+ +L+ L+ L D+ G
Sbjct: 431 SVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGL 467
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 96/254 (37%), Gaps = 3/254 (1%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L+ ++ II G K + AE L M + + D T +V Y +G
Sbjct: 147 MLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSLVHGYLSSGQ 206
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
LK A +++ G+P + +Y ++ + G +L M Y
Sbjct: 207 LKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNPNVATYGG 266
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL GY+ G+ + + + G+ PD + + I AY G+ +A F MR+ G
Sbjct: 267 LLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQG 326
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
L P ++ K +L+ A+ + DG L F G E+ E
Sbjct: 327 LMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAE 386
Query: 401 HVLREY---GLRET 411
+ E G+R T
Sbjct: 387 ELFYEMMDRGIRPT 400
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 79/178 (44%), Gaps = 2/178 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFIC--DQVTLTVMVVMYSKAGNLKMAEE 226
++ YT ++ G + + + A + + M G C + V+ T ++ + K + A
Sbjct: 83 DVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHGFFKEDEVGKAYT 142
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
F E+ G P D + S++ + +D+ E +LR+M + + Y +L+ GY
Sbjct: 143 LFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSLVHGYL 202
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
+G + A R+ + + G P+ ++LI+ G +A +M ++ P+
Sbjct: 203 SSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNPN 260
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 75/195 (38%), Gaps = 17/195 (8%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
++ +I Y +I G K ++ A + M G D V T ++ +S G +
Sbjct: 324 QQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWE 383
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
AEE F E+ G + +M+ + G + + L M V Y A++
Sbjct: 384 KAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNAII 443
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
GY + G + ++ + + G+ P+ A+ N T +M GL+
Sbjct: 444 HGYFLAGKLDEVLKLLDDMLSVGLKPN----AVTFN------------TLLDDMLSMGLK 487
Query: 343 PS-DKCVALILSACE 356
P C LI S CE
Sbjct: 488 PDVATCNTLIDSCCE 502
>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Vitis vinifera]
Length = 590
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 88/204 (43%), Gaps = 2/204 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I Y KK A M+R G D VT ++ + + G ++ A F EI
Sbjct: 235 YNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREIN 294
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +Y +++ Y R L+ L M+ + ++ G Y ++LR G +
Sbjct: 295 --GATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIK 352
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A R+ + + PD C LINAY G A + M +AGL+P ++
Sbjct: 353 DANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALI 412
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
K ++++ A EFL ++ GF
Sbjct: 413 HGFCKLHEVDSAKEFLFEMLDAGF 436
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 99/240 (41%), Gaps = 5/240 (2%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I Y +I+G+ ++ +++ A L + G + VT T ++ Y + +L+ A
Sbjct: 266 DIVTYNSLIYGFCREGRMREALR--LFREINGATPNHVTYTTLIDGYCRVNDLEEALRLR 323
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E +++ G +Y S++ G + LL EM ++V + L+ Y
Sbjct: 324 EVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKI 383
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G+ A +V + + AG+ PD LI+ + + A M AG PS
Sbjct: 384 GDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTY 443
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGL 408
+ ++ + ++ + +L R G V A +RL ++++E R + L
Sbjct: 444 SWLVDSYYDQDNKEAVIRLPDELSRKGLFVDIS---VYRALIRRLCKIDKIESAERIFTL 500
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 85/200 (42%), Gaps = 2/200 (1%)
Query: 180 YGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLD 239
Y Q+A M+ GF TV++ +KA M + ++++ +G +
Sbjct: 137 YANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPN 196
Query: 240 KRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFE 299
+ ++ A ++G +++ E LL EM+++ ++ Y L+ Y G A + +
Sbjct: 197 IHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQD 256
Query: 300 AIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKEN 359
++ G++PD LI + G+ ++A F+ + G P+ ++ + N
Sbjct: 257 RMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREIN--GATPNHVTYTTLIDGYCRVN 314
Query: 360 QLNRALEFLIDLERDGFMVG 379
L AL +E +G G
Sbjct: 315 DLEEALRLREVMEVEGLHPG 334
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 6/166 (3%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
+I+ Y K + +A M G DQ T ++ + K + A+E E+ G
Sbjct: 376 LINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAG 435
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLR---EMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+Y +V +Y D E ++R E+ + ++V VY+AL+R E
Sbjct: 436 FSPSYSTYSWLVDSYYDQ---DNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIE 492
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
A+R+F +Q G+ D+ + L AY AG++ A M K
Sbjct: 493 SAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDK 538
>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
Length = 679
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 103/221 (46%), Gaps = 9/221 (4%)
Query: 153 YLQVAELALLEESF----EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTL 208
++++ ++ +E F E N+ +T +++G+ + + A T M G + T+
Sbjct: 251 FMKMGDMGRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALETFFCMLEEGARPNDYTI 310
Query: 209 TVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
+ +K G L + G L+ ++V Y + G ++ E + E
Sbjct: 311 VSALSACAKIGALDAGLRIHNYLSGNGFKLNLVIGTALVDMYAKCGNIEHAEKVFHETKE 370
Query: 269 QEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
+ G ++ ++ G++++G+ A + FE ++F G PD+ + ++NA +GQ +
Sbjct: 371 K----GLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLAVLNACSHSGQVNE 426
Query: 329 AYTAFQNMRKAGL-EPSDKCVALILSACEKENQLNRALEFL 368
F NMR+ L EPS K L++ + +L+ AL+F+
Sbjct: 427 GLKFFDNMRRGYLIEPSMKHYTLVVDMLGRAGRLDEALKFI 467
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 107/230 (46%), Gaps = 13/230 (5%)
Query: 153 YLQVAELALLEESFEA----NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTL 208
Y ++ +L E F++ + + +I+G+ K + A+ + M + + V+
Sbjct: 220 YCRMGDLVKATELFDSMPKKDTGSWNSLINGFMKMGDMGRAKELFVKMPEK----NVVSW 275
Query: 209 TVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
T MV +S+ G+ + A ETF + G + + S + A + G LD G + +
Sbjct: 276 TTMVNGFSQNGDPEKALETFFCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHNYLSG 335
Query: 269 QEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
+ + AL+ Y+ GN E A++VF + G+ + +++I + + G +K
Sbjct: 336 NGFKLNLVIGTALVDMYAKCGNIEHAEKVFHETKEKGLL----IWSVMIWGWAIHGHFRK 391
Query: 329 AYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMV 378
A F+ M+ G +P +L+AC Q+N L+F ++ R G+++
Sbjct: 392 ALQYFEWMKFTGTKPDSVVFLAVLNACSHSGQVNEGLKFFDNMRR-GYLI 440
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 80/206 (38%), Gaps = 8/206 (3%)
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G D +V MY K L A + F+E + + ++ Y R G L +
Sbjct: 170 GLEFDSFVRVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIHGYCRMGDLVKA 229
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
L M ++ GS + +L+ G+ G+ A+ +F + + M +N
Sbjct: 230 TELFDSMPKKDT--GS--WNSLINGFMKMGDMGRAKELFVKMPEKNVVSWTTM----VNG 281
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
+ G +KA F M + G P+D + LSAC K L+ L L +GF +
Sbjct: 282 FSQNGDPEKALETFFCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHNYLSGNGFKLN 341
Query: 380 KEASCTLAAWFKRLGVVEEVEHVLRE 405
L + + G +E E V E
Sbjct: 342 LVIGTALVDMYAKCGNIEHAEKVFHE 367
>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
Length = 590
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 88/204 (43%), Gaps = 2/204 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I Y KK A M+R G D VT ++ + + G ++ A F EI
Sbjct: 235 YNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREIN 294
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +Y +++ Y R L+ L M+ + ++ G Y ++LR G +
Sbjct: 295 --GATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIK 352
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A R+ + + PD C LINAY G A + M +AGL+P ++
Sbjct: 353 DANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALI 412
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
K ++++ A EFL ++ GF
Sbjct: 413 HGFCKLHEVDSAKEFLFEMLDAGF 436
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 99/240 (41%), Gaps = 5/240 (2%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I Y +I+G+ ++ +++ A L + G + VT T ++ Y + +L+ A
Sbjct: 266 DIVTYNSLIYGFCREGRMREALR--LFREINGATPNHVTYTTLIDGYCRVNDLEEALRLR 323
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E +++ G +Y S++ G + LL EM ++V + L+ Y
Sbjct: 324 EVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKI 383
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G+ A +V + + AG+ PD LI+ + + A M AG PS
Sbjct: 384 GDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTY 443
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGL 408
+ ++ + ++ + +L R G V A +RL ++++E R + L
Sbjct: 444 SWLVDSYYDQDNKEAVIRLPDELSRKGLFVDIS---VYRALIRRLCKIDKIESAERIFTL 500
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 85/200 (42%), Gaps = 2/200 (1%)
Query: 180 YGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLD 239
Y Q+A M+ GF TV++ +KA M + ++++ +G +
Sbjct: 137 YANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPN 196
Query: 240 KRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFE 299
+ ++ A ++G +++ E LL EM+++ ++ Y L+ Y G A + +
Sbjct: 197 IHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQD 256
Query: 300 AIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKEN 359
++ G++PD LI + G+ ++A F+ + G P+ ++ + N
Sbjct: 257 RMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREIN--GATPNHVTYTTLIDGYCRVN 314
Query: 360 QLNRALEFLIDLERDGFMVG 379
L AL +E +G G
Sbjct: 315 DLEEALRLREVMEVEGLHPG 334
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 6/166 (3%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
+I+ Y K + +A M G DQ T ++ + K + A+E E+ G
Sbjct: 376 LINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAG 435
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLR---EMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+Y +V +Y D E ++R E+ + ++V VY+AL+R E
Sbjct: 436 FSPSYSTYSWLVDSYYDQ---DNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIE 492
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
A+R+F +Q G+ D+ + L AY AG++ A M K
Sbjct: 493 SAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDK 538
>gi|255660914|gb|ACU25626.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 481
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 119/266 (44%), Gaps = 4/266 (1%)
Query: 141 VLKQLKLMEHPL-YLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR 199
VL K EH L + + E + L FE + + KII G+ ++ +A LL M ++
Sbjct: 18 VLHAAKTSEHALQFFRWVERSNL---FEHDRETHLKIIEILGRASKLNHARCILLDMPKK 74
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G D+ +M+ Y KAG ++ + + F++++ LG +SY ++ +R G
Sbjct: 75 GLEWDEDMWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVIMRRGRFMMA 134
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+ +M ++ + + ++ G+ ++G + A R FE ++ I+PD +IN
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKMDTAMRFFEDMKSREISPDVVTYNTMING 194
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
+ +A F M+ +EP+ ++ +Q++ AL + +++ G
Sbjct: 195 CYRVKKMDEAEKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQVHDALRLVEEMKGYGIKPN 254
Query: 380 KEASCTLAAWFKRLGVVEEVEHVLRE 405
TL G + E + +L+E
Sbjct: 255 AITYSTLLPGLCNAGKMSEAQSILKE 280
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 84/202 (41%), Gaps = 8/202 (3%)
Query: 163 EESFEANIRDYT---KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
E E I+ Y K+I G+ M + N +L+ G + T VM+ + +G
Sbjct: 108 ELGVERTIKSYDALFKVIMRRGRFMMAKRYFNKMLS---EGIEPTRHTFNVMIWGFFLSG 164
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ A FE++K D +Y +M+ R +D E EM + + Y
Sbjct: 165 KMDTAMRFFEDMKSREISPDVVTYNTMINGCYRVKKMDEAEKYFVEMKGKNIEPTVVTYT 224
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L++GY A R+ E ++ GI P+A + L+ AG+ +A + + M
Sbjct: 225 TLIKGYVSVDQVHDALRLVEEMKGYGIKPNAITYSTLLPGLCNAGKMSEAQSILKEMVDK 284
Query: 340 GLEPSDKCV--ALILSACEKEN 359
+ P D + LI S CE N
Sbjct: 285 YIAPKDNSIFMRLISSQCEAGN 306
>gi|359492357|ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Vitis vinifera]
Length = 476
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 84/186 (45%), Gaps = 1/186 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ + ++ K + A+ MK + FI D T ++++ + KA NL A E F
Sbjct: 145 NLAAFNSLLSALCKSKNVVKAQEIFNGMKDQ-FIPDSKTYSILLEGWGKAPNLPKAREIF 203
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E+ +G D +YG MV +AG +D +++EMD+ S +Y L+ Y +
Sbjct: 204 REMVDMGCDPDIVTYGIMVDILCKAGRVDEAVGIVKEMDSSVCKPTSFIYSVLVHTYGIE 263
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A F ++ I D + LI A+ + + AY M G+ P+ +
Sbjct: 264 NRIEDAVYTFLDMERNEIEADVAVYNALIGAFCKVNKLKNAYRVLNEMDCKGIRPNSRTC 323
Query: 349 ALILSA 354
+IL++
Sbjct: 324 NIILNS 329
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 75/172 (43%), Gaps = 1/172 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ ++H YG + +I++A T L M+R D ++ + K LK A E+
Sbjct: 253 YSVLVHTYGIENRIEDAVYTFLDMERNEIEADVAVYNALIGAFCKVNKLKNAYRVLNEMD 312
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + R+ ++ + + G D + R M + ++ Y +++ + N E
Sbjct: 313 CKGIRPNSRTCNIILNSLISCGDTDEAFRVFRRM-IKVCDPDADTYTMMIKMFCENDKLE 371
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A +V++ ++ P ++LIN G + KA + M + G+ PS
Sbjct: 372 MALKVWKYMRLKQFVPSMHTFSVLINGLCKKGNASKACILLEEMIEKGIRPS 423
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 126/294 (42%), Gaps = 19/294 (6%)
Query: 135 RADWLAVLKQLKLMEHP--LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQ---NA 189
R + V LK E+ L Q E A + ++ +IR Y +I K Q Q +
Sbjct: 40 RVSPIVVENVLKRFENAGMLAYQFFEWAGKQRNYTHSIRAYHTMIESLAKIRQYQIMWDL 99
Query: 190 ENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMA 249
N + ++K I + T +++ Y+++ +K A TF ++ P + ++ S++ A
Sbjct: 100 VNKMRSLK----ILNVETFCIIMRKYARSQKVKEAVYTFNIMEKYDVPPNLAAFNSLLSA 155
Query: 250 YVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPD 309
++ + + + + M Q + S+ Y LL G+ N A+ +F + G PD
Sbjct: 156 LCKSKNVVKAQEIFNGMKDQFI-PDSKTYSILLEGWGKAPNLPKAREIFREMVDMGCDPD 214
Query: 310 ARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLI 369
++++ AG+ +A + M + +P+ ++++ EN++ A+ +
Sbjct: 215 IVTYGIMVDILCKAGRVDEAVGIVKEMDSSVCKPTSFIYSVLVHTYGIENRIEDAVYTFL 274
Query: 370 DLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREY---GLRETYSKIPGSRS 420
D+ER+ L F ++ ++ VL E G+R P SR+
Sbjct: 275 DMERNEIEADVAVYNALIGAFCKVNKLKNAYRVLNEMDCKGIR------PNSRT 322
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 99/242 (40%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ E+N YT +I K Q+ +A L M G D V T ++ + G+L
Sbjct: 316 KGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAA 375
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A FEE++ G D+ ++ +++ RAG L + +L+EM + + V Y L+
Sbjct: 376 ARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLID 435
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
GY GN A RV + + P+ L + G + A M GLE
Sbjct: 436 GYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLEL 495
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+ +++ K L +A+ + ++E G TL + G + ++L
Sbjct: 496 NVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNML 555
Query: 404 RE 405
+E
Sbjct: 556 QE 557
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 85/199 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ YT + G K+ ++ A L M +G + T ++ K GNL+ A
Sbjct: 461 NVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIM 520
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++ G D +Y +++ ++G DR +L+EM + + Y L+ G+ M+
Sbjct: 521 TEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMS 580
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G EG +++ E + + P+ L+ Y + + ++ M + P++
Sbjct: 581 GRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTY 640
Query: 349 ALILSACEKENQLNRALEF 367
+++ K + AL F
Sbjct: 641 NILIKGHCKARNMKEALYF 659
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 88/207 (42%), Gaps = 35/207 (16%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+T +I G+ K + A M++RG D+VT T ++ +AG LK A+ +E+
Sbjct: 360 FTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMV 419
Query: 233 LLGEPLDKRSY----------GSMVMAY--------------------VRAGMLDRGEV- 261
G +D +Y G+MV A+ + G+ +G+V
Sbjct: 420 DKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVR 479
Query: 262 ----LLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
LL EM + + + Y +L+ G GN E A R+ ++ AG D LI
Sbjct: 480 AANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLI 539
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPS 344
+ +G+ +A+ Q M G++PS
Sbjct: 540 DTLCKSGEFDRAHNMLQEMLDKGIKPS 566
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/243 (19%), Positives = 96/243 (39%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E S ++ Y ++HGY + +++NA L M +G + T ++ + G +
Sbjct: 280 EMSSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVS 339
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A E++ + G LD + +++ + G L L EM + + + AL+
Sbjct: 340 DALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALI 399
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G G + A RV + + G+ D +LI+ Y G +A+ M +
Sbjct: 400 NGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVA 459
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + K+ + A E L ++ G + +L + G +E+ +
Sbjct: 460 PNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRI 519
Query: 403 LRE 405
+ E
Sbjct: 520 MTE 522
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 43/246 (17%), Positives = 88/246 (35%), Gaps = 35/246 (14%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+ + E N+ Y +I+G K ++ A + M+ G D T T ++ K+G
Sbjct: 488 MCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGE 547
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A +E+ G +Y ++ + +G ++ G+ LL M + V Y +
Sbjct: 548 FDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNS 607
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA----------- 329
L++ Y ++ N + +++ + + P+ +LI + A ++A
Sbjct: 608 LMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKG 667
Query: 330 -------YTA-----------------FQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
Y+A F MR GL + + E+ L +
Sbjct: 668 LRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTI 727
Query: 366 EFLIDL 371
+L
Sbjct: 728 TLCDEL 733
>gi|224086334|ref|XP_002307852.1| predicted protein [Populus trichocarpa]
gi|222853828|gb|EEE91375.1| predicted protein [Populus trichocarpa]
Length = 670
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 111/244 (45%), Gaps = 2/244 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+LE + N+ + ++ Y K ++ AE + M+ G IC Q + M+ +Y++
Sbjct: 2 MLELGVQPNVATFGMVMGLYQKGWNVEEAEFSFAQMRSFGIIC-QSAYSAMITIYTRLSL 60
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
AEE ++ L+ ++ ++ AY + G L++ E LL M + Y
Sbjct: 61 YDKAEEVIGLMRDDKVVLNLENWLVLLNAYSQQGKLEKAEQLLVAMQEAKFSPTIVAYNI 120
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ GY N AQR+F IQ AG+ PD +I + G ++A ++ +++ G
Sbjct: 121 LITGYGKASNMVAAQRLFSGIQNAGLEPDDTTYRSMIEGWGRVGNYKEAEWYYKELKRLG 180
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+P+ + +++ + A L D+ + G L A ++++G ++++
Sbjct: 181 FKPNSPNLYTLINLQAEHGDEEGACRTLDDMLKIGCQYSSILGTLLKA-YEKVGRIDKIP 239
Query: 401 HVLR 404
+L+
Sbjct: 240 FLLK 243
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/228 (19%), Positives = 97/228 (42%), Gaps = 6/228 (2%)
Query: 154 LQVAELA-----LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTL 208
L V EL+ +L+ F+ N + ++ Y K A + ++RG + D ++
Sbjct: 444 LPVGELSRLFNEMLQRGFDPNTITFNVMLDVYAKAKLFNKARELFMMARKRGLV-DVISY 502
Query: 209 TVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
++ Y + + K T ++ G + +Y ++ AY + G ++ +L+ M
Sbjct: 503 NTIIAAYGRKRDFKNMASTIHTMQFDGFSVSLEAYNCVLDAYGKEGQMESFRSVLQRMKN 562
Query: 269 QEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
Y ++ Y G + V ++ G+ PD LI AY +AG +
Sbjct: 563 SSCTADHYTYNIMMNIYGELGWIDEVAGVLTELRECGLGPDLCSYNTLIKAYGIAGMVED 622
Query: 329 AYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
A + MR+ G+EP +++ +K ++ A+++ + +++ G
Sbjct: 623 AVGLVKEMRQNGVEPDKITYTNLITTLQKNDKYLEAVKWSLWMKQRGL 670
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 100/247 (40%), Gaps = 7/247 (2%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
+A+ E F I Y +I GYGK + A+ ++ G D T M+ + +
Sbjct: 104 VAMQEAKFSPTIVAYNILITGYGKASNMVAAQRLFSGIQNAGLEPDDTTYRSMIEGWGRV 163
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG---S 275
GN K AE ++E+K LG + + +++ G E R +D + +G S
Sbjct: 164 GNYKEAEWYYKELKRLGFKPNSPNLYTLINLQAEHG---DEEGACRTLDDM-LKIGCQYS 219
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
+ LL+ Y G + + + + +T + C++L+ AY +A +
Sbjct: 220 SILGTLLKAYEKVGRIDKIPFLLKGSFYQHVTVNQNSCSILVIAYVKNLLVDEAIKLLGD 279
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGV 395
+ D L++ +C++ L+ A++ + + SCT+ + +G
Sbjct: 280 KKWNDPVFEDNLYHLLICSCKELGHLDSAVKIYSLMPKSDDRPNLHISCTMIDIYTTMGQ 339
Query: 396 VEEVEHV 402
E E +
Sbjct: 340 FNEGEKL 346
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 80/183 (43%), Gaps = 1/183 (0%)
Query: 211 MVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE 270
M+ +Y+ G E+ + ++K G LD ++ ++ YV+AG L +L M+ ++
Sbjct: 330 MIDIYTTMGQFNEGEKLYMKLKSSGIGLDVIAFSIVIRMYVKAGSLKDACSVLETMEKEK 389
Query: 271 VYVGS-EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
V +++ +LR Y G + ++ I +G+ D + LIN A +
Sbjct: 390 DMVPDIYLFRDMLRVYQQCGMMDKLNDLYFKILKSGVVWDQELYNCLINCCARALPVGEL 449
Query: 330 YTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAW 389
F M + G +P+ ++L K N+A E + + G + + +AA+
Sbjct: 450 SRLFNEMLQRGFDPNTITFNVMLDVYAKAKLFNKARELFMMARKRGLVDVISYNTIIAAY 509
Query: 390 FKR 392
++
Sbjct: 510 GRK 512
>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 106/243 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+LE + Y +I G+ + +++ M +RG D T ++ G
Sbjct: 514 MLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGK 573
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A + ++E K G + +YG M+ Y +A ++ E L E+ ++++ + S VY
Sbjct: 574 LDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNI 633
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+++ + NGN A ++ E ++ GI P+ + LI+ G + A MRK G
Sbjct: 634 IIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEG 693
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
P+ C ++ K Q++ A +++ K + + +LG +E+
Sbjct: 694 FVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKAN 753
Query: 401 HVL 403
++L
Sbjct: 754 NLL 756
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 99/224 (44%), Gaps = 3/224 (1%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
+NI Y ++ GY K +I++ EN + + + + +++ + + GN+ A +
Sbjct: 591 SNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQL 650
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
E +K G + +Y S++ G+++ + L+ EM + Y AL+ GY
Sbjct: 651 LENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCK 710
Query: 288 NGNSEGAQRVF-EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G + A+ + E I F I P+ ++I+ Y G +KA M+++G+ P
Sbjct: 711 LGQMDTAESTWLEMISF-NIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVV 769
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLA-AW 389
++ + K N ++ A + + +G V + TL W
Sbjct: 770 TYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 813
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 92/198 (46%), Gaps = 1/198 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ E ++ +T +I+ K +++NA + M++ G + VT ++ + G
Sbjct: 234 VMSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGR 293
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A E E++ + G + ++YG+++ ++ D+ +L EM V+
Sbjct: 294 LDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNN 353
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ GY GN EGA ++ + + ITP + L+ + + Q + A A + + +G
Sbjct: 354 LIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSG 413
Query: 341 LE-PSDKCVALILSACEK 357
L D C +++ C+K
Sbjct: 414 LSIHPDNCYSVVHWLCKK 431
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 79/186 (42%), Gaps = 1/186 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
LL + E N Y II + + + A L MK +G + + T + ++ G
Sbjct: 619 LLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGL 678
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ A+ +E++ G + Y +++ Y + G +D E EM + ++ Y
Sbjct: 679 VEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTV 738
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ GY GN E A + ++ +GI PD +L N + A A+ M G
Sbjct: 739 MIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEG 798
Query: 341 LEPSDK 346
L P D+
Sbjct: 799 L-PVDE 803
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 76/169 (44%), Gaps = 4/169 (2%)
Query: 157 AELALLE----ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMV 212
A L LLE + N Y+ +IHG +++A++ + M++ GF+ + V T ++
Sbjct: 646 AALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALI 705
Query: 213 VMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY 272
Y K G + AE T+ E+ +K +Y M+ Y + G +++ LL +M +
Sbjct: 706 GGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIV 765
Query: 273 VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQ 321
Y L G+ + + A +V + + G+ D L++ +
Sbjct: 766 PDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGWN 814
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/245 (18%), Positives = 104/245 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L +F + T ++ G K + A + +G +VT ++ AG
Sbjct: 444 MLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGK 503
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A +E+ G P+D+ +Y ++++ + G ++ L EM + + Y
Sbjct: 504 LPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNF 563
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LLRG G + A ++++ + +G+ + +++ Y A + + F +
Sbjct: 564 LLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKK 623
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+E + +I+ A + + AL+ L +++ G + +L +G+VE+ +
Sbjct: 624 MELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAK 683
Query: 401 HVLRE 405
H++ E
Sbjct: 684 HLIDE 688
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/269 (19%), Positives = 106/269 (39%), Gaps = 2/269 (0%)
Query: 134 RRADWLAVLKQLKLMEHPLYLQVAEL--ALLEESFEANIRDYTKIIHGYGKKMQIQNAEN 191
R +D L + L + +L+ EL LLE+ A+ +IHG ++ A
Sbjct: 450 RPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASR 509
Query: 192 TLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYV 251
+ M RG D++T +++ + G ++ EE+ G D +Y ++
Sbjct: 510 IVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLC 569
Query: 252 RAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDAR 311
G LD L E A + Y ++ GY E + +F + + ++
Sbjct: 570 NVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSI 629
Query: 312 MCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDL 371
+ ++I A+ G A +NM+ G+ P+ + ++ + A + ++
Sbjct: 630 VYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEM 689
Query: 372 ERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
++GF+ L + +LG ++ E
Sbjct: 690 RKEGFVPNVVCYTALIGGYCKLGQMDTAE 718
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 85/211 (40%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
+ +I Y ++ G ++ +A K G I + T +M+ Y KA ++ E
Sbjct: 555 QPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVEN 614
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
F E+ L+ Y ++ A+ + G + LL M ++ + Y +L+ G
Sbjct: 615 LFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVC 674
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G E A+ + + ++ G P+ LI Y GQ A + + M + P+
Sbjct: 675 NIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKF 734
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGFM 377
+++ K + +A LI ++ G +
Sbjct: 735 TYTVMIDGYCKLGNMEKANNLLIKMKESGIV 765
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 76/186 (40%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
++H KK + +A M R F + LT++V K G A E + + G
Sbjct: 424 VVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKG 483
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
P K + +++ AG L +++EM + + + Y AL+ G+ G EG
Sbjct: 484 SPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCF 543
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
R+ E + GI PD L+ G+ A + + +GL + +++
Sbjct: 544 RLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGY 603
Query: 356 EKENQL 361
K N++
Sbjct: 604 CKANRI 609
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 114/254 (44%), Gaps = 16/254 (6%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+ +E E N+ Y +I G + ++++++ M+ R D ++ T M+ +++ G
Sbjct: 200 VFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRER----DSISWTSMITGFTQNGL 255
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGE----VLLREMDAQEVYVGSE 276
+ A + F E+KL +D+ ++GS++ A L G+ ++R ++V S
Sbjct: 256 DRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVAS- 314
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
AL+ Y N + A+ VF+ + + A+L+ Y G S++A F +M
Sbjct: 315 ---ALVDMYCKCKNIKSAEAVFKKMTCKNVVS---WTAMLV-GYGQNGYSEEAVKTFSDM 367
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVV 396
+K G+EP D + ++S+C L +F G + S L + + G +
Sbjct: 368 QKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSI 427
Query: 397 EEVEHVLREYGLRE 410
E+ + E ++
Sbjct: 428 EDSHRLFNEISFKD 441
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 106/251 (42%), Gaps = 19/251 (7%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ ++ NI + ++ Y K I++AE M + + V+ T M+V Y + G
Sbjct: 301 IIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCK----NVVSWTAMLVGYGQNGY 356
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A +TF +++ G D + GS++ + L+ G + V A
Sbjct: 357 SEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNA 416
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ Y G+ E + R+F I F D L++ Y G++ + F++M G
Sbjct: 417 LVTLYGKCGSIEDSHRLFNEISF----KDEVTWTALVSGYAQFGKANETIGLFESMLAHG 472
Query: 341 LEPSDKCVALILSAC------EKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
L+P +LSAC EK NQ+ ++ + G + ++ + F R G
Sbjct: 473 LKPDKVTFIGVLSACSRAGLVEKGNQIFESM-----INEHGIVPIQDHYTCMIDLFSRAG 527
Query: 395 VVEEVEHVLRE 405
+EE + + +
Sbjct: 528 RIEEARNFINK 538
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 91/210 (43%), Gaps = 21/210 (10%)
Query: 157 AELALLEESFEANIRDYTK-----------IIHGYGKKMQIQNAENTLLAMKRRGFICDQ 205
A LA LEE + + R T ++ YGK I+++ + + D+
Sbjct: 387 ANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFK----DE 442
Query: 206 VTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLRE 265
VT T +V Y++ G FE + G DK ++ ++ A RAG++++G +
Sbjct: 443 VTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFES 502
Query: 266 MDAQEVYVG-SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAG 324
M + V + Y ++ +S G E A+ + F +PDA A L+++ + G
Sbjct: 503 MINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPF---SPDAISWATLLSSCRFYG 559
Query: 325 QSQKAYTAFQNMRKAGLEPSDKCVALILSA 354
A + + + L+P + ++LS+
Sbjct: 560 NMDIGKWAAEFLME--LDPHNTASYVLLSS 587
>gi|225424178|ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial [Vitis vinifera]
Length = 531
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 83/183 (45%)
Query: 170 IRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFE 229
+ D+ +++ K ++ A+ MK R F D + T+++ + + NL +E +
Sbjct: 214 LSDFNRLLDALCKSRHVERAQEVFDKMKDRKFRPDIKSYTILLEGWGQEQNLLRLDEVYR 273
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
E+K G D +YG ++ A+ +A D L +M+A + +Y L+ G
Sbjct: 274 EMKDEGFEPDAVTYGILINAHCKARRYDAAVELFHKMEANKCMPTPHIYCTLINGLGSER 333
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
A + FE + +G TP+A ++ +Y + + AY MRK G+ P +
Sbjct: 334 RLTEALQFFERSKASGFTPEAPTYNAVVGSYCQSMRMDDAYRIVDEMRKCGVGPQTRTYD 393
Query: 350 LIL 352
+IL
Sbjct: 394 IIL 396
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 95/214 (44%), Gaps = 1/214 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
++ F+ + +Y +I GK Q + N + M+ +G + Q T ++ Y++A +K
Sbjct: 138 QKGFKYSTENYNALIEALGKIKQFKMIWNLVNDMRSKGLL-TQETFALISRRYARARKVK 196
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A ETFE+++ G + ++ A ++ ++R + + +M ++ + Y LL
Sbjct: 197 EAVETFEKMEKFGLQPVLSDFNRLLDALCKSRHVERAQEVFDKMKDRKFRPDIKSYTILL 256
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G+ N V+ ++ G PDA +LINA+ A + A F M
Sbjct: 257 EGWGQEQNLLRLDEVYREMKDEGFEPDAVTYGILINAHCKARRYDAAVELFHKMEANKCM 316
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
P+ +++ E +L AL+F + GF
Sbjct: 317 PTPHIYCTLINGLGSERRLTEALQFFERSKASGF 350
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 109/260 (41%), Gaps = 7/260 (2%)
Query: 131 MKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAE 190
++P +D+ +L L H Q + + F +I+ YT ++ G+G++ + +
Sbjct: 210 LQPVLSDFNRLLDALCKSRHVERAQEVFDKMKDRKFRPDIKSYTILLEGWGQEQNLLRLD 269
Query: 191 NTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEI---KLLGEPLDKRSYGSMV 247
MK GF D VT +++ + KA A E F ++ K + P Y +++
Sbjct: 270 EVYREMKDEGFEPDAVTYGILINAHCKARRYDAAVELFHKMEANKCMPTP---HIYCTLI 326
Query: 248 MAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGIT 307
L A + Y A++ Y + + A R+ + ++ G+
Sbjct: 327 NGLGSERRLTEALQFFERSKASGFTPEAPTYNAVVGSYCQSMRMDDAYRIVDEMRKCGVG 386
Query: 308 PDARMCALLINAYQMAGQSQKAYTAFQNM-RKAGLEPSDKCVALILSACEKENQLNRALE 366
P R ++++ A ++++AY FQ M + G EPS +++ E +++ AL
Sbjct: 387 PQTRTYDIILHHLIKARRTKEAYRVFQGMSSEPGCEPSVSTYEIVVRMFCNEERVDMALR 446
Query: 367 FLIDLERDGFMVGKEASCTL 386
+++ G + G TL
Sbjct: 447 VWDEMKAKGVLPGMHMFSTL 466
>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19440, chloroplastic-like [Cucumis sativus]
Length = 799
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 106/243 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+LE + Y +I G+ + +++ M +RG D T ++ G
Sbjct: 491 MLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGK 550
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A + ++E K G + +YG M+ Y +A ++ E L E+ ++++ + S VY
Sbjct: 551 LDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNI 610
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+++ + NGN A ++ E ++ GI P+ + LI+ G + A MRK G
Sbjct: 611 IIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEG 670
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
P+ C ++ K Q++ A +++ K + + +LG +E+
Sbjct: 671 FVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKAN 730
Query: 401 HVL 403
++L
Sbjct: 731 NLL 733
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 99/224 (44%), Gaps = 3/224 (1%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
+NI Y ++ GY K +I++ EN + + + + +++ + + GN+ A +
Sbjct: 568 SNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQL 627
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
E +K G + +Y S++ G+++ + L+ EM + Y AL+ GY
Sbjct: 628 LENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCK 687
Query: 288 NGNSEGAQRVF-EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G + A+ + E I F I P+ ++I+ Y G +KA M+++G+ P
Sbjct: 688 LGQMDTAESTWLEMISF-NIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVV 746
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLA-AW 389
++ + K N ++ A + + +G V + TL W
Sbjct: 747 TYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 790
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 92/198 (46%), Gaps = 1/198 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ E ++ +T +I+ K +++NA + M++ G + VT ++ + G
Sbjct: 211 VMSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGR 270
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A E E++ + G + ++YG+++ ++ D+ +L EM V+
Sbjct: 271 LDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNN 330
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ GY GN EGA ++ + + ITP + L+ + + Q + A A + + +G
Sbjct: 331 LIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSG 390
Query: 341 LE-PSDKCVALILSACEK 357
L D C +++ C+K
Sbjct: 391 LSIHPDNCYSVVHWLCKK 408
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 79/186 (42%), Gaps = 1/186 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
LL + E N Y II + + + A L MK +G + + T + ++ G
Sbjct: 596 LLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGL 655
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ A+ +E++ G + Y +++ Y + G +D E EM + ++ Y
Sbjct: 656 VEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTV 715
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ GY GN E A + ++ +GI PD +L N + A A+ M G
Sbjct: 716 MIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEG 775
Query: 341 LEPSDK 346
L P D+
Sbjct: 776 L-PVDE 780
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 76/169 (44%), Gaps = 4/169 (2%)
Query: 157 AELALLE----ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMV 212
A L LLE + N Y+ +IHG +++A++ + M++ GF+ + V T ++
Sbjct: 623 AALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALI 682
Query: 213 VMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY 272
Y K G + AE T+ E+ +K +Y M+ Y + G +++ LL +M +
Sbjct: 683 GGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIV 742
Query: 273 VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQ 321
Y L G+ + + A +V + + G+ D L++ +
Sbjct: 743 PDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGWN 791
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/245 (18%), Positives = 104/245 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L +F + T ++ G K + A + +G +VT ++ AG
Sbjct: 421 MLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGK 480
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A +E+ G P+D+ +Y ++++ + G ++ L EM + + Y
Sbjct: 481 LPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNF 540
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LLRG G + A ++++ + +G+ + +++ Y A + + F +
Sbjct: 541 LLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKK 600
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+E + +I+ A + + AL+ L +++ G + +L +G+VE+ +
Sbjct: 601 MELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAK 660
Query: 401 HVLRE 405
H++ E
Sbjct: 661 HLIDE 665
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/269 (19%), Positives = 106/269 (39%), Gaps = 2/269 (0%)
Query: 134 RRADWLAVLKQLKLMEHPLYLQVAEL--ALLEESFEANIRDYTKIIHGYGKKMQIQNAEN 191
R +D L + L + +L+ EL LLE+ A+ +IHG ++ A
Sbjct: 427 RPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASR 486
Query: 192 TLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYV 251
+ M RG D++T +++ + G ++ EE+ G D +Y ++
Sbjct: 487 IVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLC 546
Query: 252 RAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDAR 311
G LD L E A + Y ++ GY E + +F + + ++
Sbjct: 547 NVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSI 606
Query: 312 MCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDL 371
+ ++I A+ G A +NM+ G+ P+ + ++ + A + ++
Sbjct: 607 VYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEM 666
Query: 372 ERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
++GF+ L + +LG ++ E
Sbjct: 667 RKEGFVPNVVCYTALIGGYCKLGQMDTAE 695
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 85/211 (40%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
+ +I Y ++ G ++ +A K G I + T +M+ Y KA ++ E
Sbjct: 532 QPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVEN 591
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
F E+ L+ Y ++ A+ + G + LL M ++ + Y +L+ G
Sbjct: 592 LFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVC 651
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G E A+ + + ++ G P+ LI Y GQ A + + M + P+
Sbjct: 652 NIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKF 711
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGFM 377
+++ K + +A LI ++ G +
Sbjct: 712 TYTVMIDGYCKLGNMEKANNLLIKMKESGIV 742
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 76/186 (40%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
++H KK + +A M R F + LT++V K G A E + + G
Sbjct: 401 VVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKG 460
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
P K + +++ AG L +++EM + + + Y AL+ G+ G EG
Sbjct: 461 SPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCF 520
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
R+ E + GI PD L+ G+ A + + +GL + +++
Sbjct: 521 RLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGY 580
Query: 356 EKENQL 361
K N++
Sbjct: 581 CKANRI 586
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 93/215 (43%), Gaps = 16/215 (7%)
Query: 130 FMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNA 189
FM R +D AVL++++ + F ++ Y +I+GY K+ + A
Sbjct: 265 FMDARASDAYAVLEEMQ----------------KNGFSPDVFTYNILINGYCKEGNEKKA 308
Query: 190 ENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMA 249
M ++G VT T ++ ++S+ G ++ + F G D Y +++ +
Sbjct: 309 LEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINS 368
Query: 250 YVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPD 309
+ G ++R ++ EM+ + + Y L+RG+ + G + A+ + + + GI PD
Sbjct: 369 HCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPD 428
Query: 310 ARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
LI+ Y M G + A M G P+
Sbjct: 429 LVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPT 463
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 85/206 (41%), Gaps = 4/206 (1%)
Query: 159 LALLEESFEANIR----DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
L + EE + +R YT +I+ + +K Q+Q + ++G D V ++
Sbjct: 309 LEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINS 368
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
+ G+++ A E E++ P D +Y +++ + G LD L+ EM + +
Sbjct: 369 HCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPD 428
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
Y L+ GYSM G+ + A RV + + G P LI Q A +
Sbjct: 429 LVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMK 488
Query: 335 NMRKAGLEPSDKCVALILSACEKENQ 360
M G+ P D ++ E++
Sbjct: 489 EMVAKGITPDDSTYISLIEGLTTEDE 514
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 89/216 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ + Y ++H + +A L M++ GF D T +++ Y K GN
Sbjct: 245 MVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGN 304
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
K A E FEE+ G +Y S++ + R G + + L + + +Y A
Sbjct: 305 EKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNA 364
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ + G+ E A + ++ I PD L+ + + G+ +A T M K G
Sbjct: 365 LINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRG 424
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
++P ++S + + AL ++ GF
Sbjct: 425 IQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGF 460
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 109/288 (37%), Gaps = 39/288 (13%)
Query: 156 VAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFIC-DQVTLTVMVVM 214
V L LL + N Y +I G+ + ++Q A + M+ RG I D+ T ++
Sbjct: 133 VRALELLRQMPRPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISG 192
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRS-YGSMVMAYVRAGMLD-----------RG--- 259
+ K G ++ A + F+E+ GE Y +++ Y G LD RG
Sbjct: 193 WCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAM 252
Query: 260 ---------EVLLREMDAQEVYVGSE------------VYKALLRGYSMNGNSEGAQRVF 298
L + A + Y E Y L+ GY GN + A VF
Sbjct: 253 TVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVF 312
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV-ALILSACEK 357
E + G+ A LI + GQ Q+ F K G+ P ALI S C
Sbjct: 313 EEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTG 372
Query: 358 ENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ RA E + ++E+ TL F LG ++E ++ E
Sbjct: 373 -GDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDE 419
>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 94/216 (43%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+L+ + N+ Y IIHG KK ++ A L MK G D T ++++ + K G
Sbjct: 315 SLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQG 374
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+++ EE+K SY S+ + + D + R++ A Y
Sbjct: 375 DVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYS 434
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L++G+ M G+ + A ++ E + + PD L++ + G A F M +
Sbjct: 435 ILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEG 494
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
G+ PS +I+ A +E ++ AL + +++ G
Sbjct: 495 GILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQG 530
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 96/229 (41%), Gaps = 7/229 (3%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAG------NLKMAEETFEEIKLLGEPLDKRSYGSMVMA 249
MK G + T T+M+ Y K + + A E EE++ GE +Y + +
Sbjct: 240 MKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYG 299
Query: 250 YVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPD 309
R G ++ +R + + V Y A++ G G + A +V E ++ GI+PD
Sbjct: 300 LCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPD 359
Query: 310 ARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLI 369
++LI+ + G +K + M+ + +EPS + + K+ + +L+
Sbjct: 360 VYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFR 419
Query: 370 DLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRETYSKIPGS 418
DL G+ + A L F G ++ H L E +R + P +
Sbjct: 420 DLGAAGYKYDQTAYSILIKGFCMQGDLDSA-HKLMEEMVRNNLAPDPSN 467
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 75/171 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I G+ K+ Q A M + G D V T+++ + + A F+++
Sbjct: 573 YSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMT 632
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G DK SY S++ + R G + + L EM + Y +L+ GY +
Sbjct: 633 ENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRID 692
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
A + + ++ GITPD +LI A++ G KA M++ G+ P
Sbjct: 693 IADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLP 743
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 80/187 (42%), Gaps = 4/187 (2%)
Query: 161 LLEESFEANI----RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS 216
L+EE N+ ++ ++HG+ K NA M G + T V++ +
Sbjct: 452 LMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHC 511
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
+ G ++ A E++ G + +Y +++ + +R L M + V
Sbjct: 512 REGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVV 571
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
VY L+ G++ NS+ A ++ + G+TPD +LIN + +AY F+ M
Sbjct: 572 VYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKM 631
Query: 337 RKAGLEP 343
+ G+ P
Sbjct: 632 TENGMTP 638
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 62/137 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I+ + ++ A N M G D+++ T ++ + + G+++ A F E+
Sbjct: 608 YTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEML 667
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G +Y S+V Y + +D ++L+ EM + + Y L+ + GN +
Sbjct: 668 QRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLD 727
Query: 293 GAQRVFEAIQFAGITPD 309
A + ++ G+ PD
Sbjct: 728 KALEMLNEMKENGVLPD 744
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L+ + YT ++ GY K +I A+ + MKR+G D VT V++ + + GN
Sbjct: 666 MLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGN 725
Query: 221 LKMAEETFEEIKLLGEPLDKRSY 243
L A E E+K G D +Y
Sbjct: 726 LDKALEMLNEMKENGVLPDHMTY 748
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 50/109 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I G+ + ++ A M +RG + VT T +V Y K + +A+ +E+K
Sbjct: 643 YTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMK 702
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
G D +Y ++ A+ R G LD+ +L EM V Y L
Sbjct: 703 RKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMTYMML 751
>gi|168002263|ref|XP_001753833.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694809|gb|EDQ81155.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 779
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 117/289 (40%), Gaps = 24/289 (8%)
Query: 134 RRADWLAVLKQLKLM---------EHPLYLQVAELA----------LLEE----SFEANI 170
+R+DW L+ K M EH + + + L E+ E N+
Sbjct: 50 QRSDWQKALRLFKYMQRHQWCKPNEHVYTIMIGIMGREGMLDKASELFEDMPLNDVEWNV 109
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG-NLKMAEETFE 229
+T +I+ YG+ Q + + + L MKR + +T ++ +K G + F
Sbjct: 110 YSFTALINAYGRNGQHEASLHLLARMKREKVTPNLITYNTVINACAKGGLEWEGLLGLFA 169
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
+++ G D +Y +++ A G+++ ++ R M+ V S Y AL+ Y
Sbjct: 170 QMRHEGIQPDIITYNTLLSACSSRGLVEEAGMVFRTMNEAGVVPDSITYNALVDIYGQAD 229
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
EG + ++ AG PD +LI AY AG+ + A F+ M++AG P +
Sbjct: 230 RHEGVGELLREMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQEAGCTPDVVTFS 289
Query: 350 LILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
+L A K + D++ G TL F + G +E
Sbjct: 290 TLLEAYGKHGCYDEVRLLFTDMKERGTEPDVNTYNTLIQVFGQGGFFQE 338
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 78/195 (40%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E + +I Y ++ + ++ A M G + D +T +V +Y +A +
Sbjct: 173 HEGIQPDIITYNTLLSACSSRGLVEEAGMVFRTMNEAGVVPDSITYNALVDIYGQADRHE 232
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
E E++ G D +Y ++ AY RAG + ++M + LL
Sbjct: 233 GVGELLREMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQEAGCTPDVVTFSTLL 292
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
Y +G + + +F ++ G PD LI + G Q++ F ++ G+E
Sbjct: 293 EAYGKHGCYDEVRLLFTDMKERGTEPDVNTYNTLIQVFGQGGFFQESINLFWDLLDGGVE 352
Query: 343 PSDKCVALILSACEK 357
P A +L +C K
Sbjct: 353 PDMSTYAGLLYSCGK 367
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 72/175 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y +I YG+ + + A M+ G D VT + ++ Y K G F
Sbjct: 249 DVVAYNILIEAYGRAGKYRAAAKMFKQMQEAGCTPDVVTFSTLLEAYGKHGCYDEVRLLF 308
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++K G D +Y +++ + + G L ++ V Y LL
Sbjct: 309 TDMKERGTEPDVNTYNTLIQVFGQGGFFQESINLFWDLLDGGVEPDMSTYAGLLYSCGKG 368
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G + A+++ + + +TP LI AY A +A AF +M+++G +P
Sbjct: 369 GLHKAAKKIHRHMLQSYVTPTTDGFTGLITAYGNAALYSEATYAFNSMKESGCKP 423
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/182 (19%), Positives = 81/182 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ YG+ + + L M++ G D V +++ Y +AG + A + F++++
Sbjct: 218 YNALVDIYGQADRHEGVGELLREMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQ 277
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D ++ +++ AY + G D +L +M + Y L++ + G +
Sbjct: 278 EAGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERGTEPDVNTYNTLIQVFGQGGFFQ 337
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
+ +F + G+ PD A L+ + G + A ++M ++ + P+ ++
Sbjct: 338 ESINLFWDLLDGGVEPDMSTYAGLLYSCGKGGLHKAAKKIHRHMLQSYVTPTTDGFTGLI 397
Query: 353 SA 354
+A
Sbjct: 398 TA 399
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/204 (19%), Positives = 81/204 (39%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ ++ ++ YGK MK RG D T ++ ++ + G + + F
Sbjct: 284 DVVTFSTLLEAYGKHGCYDEVRLLFTDMKERGTEPDVNTYNTLIQVFGQGGFFQESINLF 343
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ G D +Y ++ + + G+ + + R M V ++ + L+ Y
Sbjct: 344 WDLLDGGVEPDMSTYAGLLYSCGKGGLHKAAKKIHRHMLQSYVTPTTDGFTGLITAYGNA 403
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
A F +++ +G PD LI A+ G +A +A+ M G+
Sbjct: 404 ALYSEATYAFNSMKESGCKPDLETYNALIGAHAGGGLYCEAGSAYLTMIDEGISADVSTY 463
Query: 349 ALILSACEKENQLNRALEFLIDLE 372
++ A + + A+EF D+E
Sbjct: 464 NSLIEAFGRGGLFDDAIEFSRDME 487
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 57/280 (20%), Positives = 104/280 (37%), Gaps = 39/280 (13%)
Query: 170 IRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFIC--DQVTLTVMVVMYSKAGNLKMAEET 227
I D++ I + ++ Q A M+R + C ++ T+M+ + + G L A E
Sbjct: 38 INDFSLIFREFAQRSDWQKALRLFKYMQRHQW-CKPNEHVYTIMIGIMGREGMLDKASEL 96
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV---------------- 271
FE++ L + S+ +++ AY R G + LL M ++V
Sbjct: 97 FEDMPLNDVEWNVYSFTALINAYGRNGQHEASLHLLARMKREKVTPNLITYNTVINACAK 156
Query: 272 ----------------YVGSE----VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDAR 311
+ G + Y LL S G E A VF + AG+ PD+
Sbjct: 157 GGLEWEGLLGLFAQMRHEGIQPDIITYNTLLSACSSRGLVEEAGMVFRTMNEAGVVPDSI 216
Query: 312 MCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDL 371
L++ Y A + + + M +AG P +++ A + + A + +
Sbjct: 217 TYNALVDIYGQADRHEGVGELLREMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQM 276
Query: 372 ERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRET 411
+ G TL + + G +EV + + R T
Sbjct: 277 QEAGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERGT 316
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 60/158 (37%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L+ +T +I YG A +MK G D T ++ ++ G
Sbjct: 381 MLQSYVTPTTDGFTGLITAYGNAALYSEATYAFNSMKESGCKPDLETYNALIGAHAGGGL 440
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A + + G D +Y S++ A+ R G+ D R+M+ Y+A
Sbjct: 441 YCEAGSAYLTMIDEGISADVSTYNSLIEAFGRGGLFDDAIEFSRDMEEARCSPNRHTYEA 500
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLIN 318
L+ Y G + A+ F +Q G P LL++
Sbjct: 501 LMGVYCTAGLFDEAKAQFLDLQVGGELPSVDSYCLLLS 538
>gi|302766812|ref|XP_002966826.1| hypothetical protein SELMODRAFT_11024 [Selaginella moellendorffii]
gi|300164817|gb|EFJ31425.1| hypothetical protein SELMODRAFT_11024 [Selaginella moellendorffii]
Length = 484
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 109/243 (44%), Gaps = 1/243 (0%)
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL 221
LE N+R +++ + ++ +++ A + +K G D VT + Y+ AG +
Sbjct: 162 LEPVARPNLRTMNTLLNAWCREGRLEEAWRVVAMIKSAGMQPDAVTYNTLAKAYAAAGRV 221
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
E+ ++K + R+Y ++ Y + GM +RG LL + + ++ + L
Sbjct: 222 AELEDLIADMKNARLKPNLRTYAILISCYCQNGMPERGLQLLSRLKFEGLHPDVVAFNTL 281
Query: 282 LRGYSMNGNSE-GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+GYS + + + V + + G+ PD + ++N + AG + KA T M++
Sbjct: 282 LKGYSQENDQQLKLEMVLDLMAANGVRPDVTTYSTIMNWWSSAGMADKAQTILLEMQQDR 341
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
++P + A++ + + + A L D+ G T+ + + +G +++
Sbjct: 342 VKPDVRAFAILAKGYVRSGRTHEAESLLQDMSLHGVAPNVVVYTTIISGWCSMGRMDDAL 401
Query: 401 HVL 403
VL
Sbjct: 402 RVL 404
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 81/192 (42%), Gaps = 1/192 (0%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQ-NAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E ++ + ++ GY ++ Q E L M G D T + ++ +S AG
Sbjct: 269 EGLHPDVVAFNTLLKGYSQENDQQLKLEMVLDLMAANGVRPDVTTYSTIMNWWSSAGMAD 328
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A+ E++ D R++ + YVR+G E LL++M V VY ++
Sbjct: 329 KAQTILLEMQQDRVKPDVRAFAILAKGYVRSGRTHEAESLLQDMSLHGVAPNVVVYTTII 388
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G+ G + A RV E + G P+ L+ + A Q ++A M AGL
Sbjct: 389 SGWCSMGRMDDALRVLELMLERGEAPNLNTVQTLVWGFCEARQPREAEEMVAAMAAAGLP 448
Query: 343 PSDKCVALILSA 354
KC+ +I SA
Sbjct: 449 VDSKCLDMIASA 460
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 82/193 (42%), Gaps = 2/193 (1%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA- 224
+ N+R Y +I Y + + L +K G D V ++ YS+ + ++
Sbjct: 236 LKPNLRTYAILISCYCQNGMPERGLQLLSRLKFEGLHPDVVAFNTLLKGYSQENDQQLKL 295
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
E + + G D +Y +++ + AGM D+ + +L EM V + L +G
Sbjct: 296 EMVLDLMAANGVRPDVTTYSTIMNWWSSAGMADKAQTILLEMQQDRVKPDVRAFAILAKG 355
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
Y +G + A+ + + + G+ P+ + +I+ + G+ A + M + G P+
Sbjct: 356 YVRSGRTHEAESLLQDMSLHGVAPNVVVYTTIISGWCSMGRMDDALRVLELMLERGEAPN 415
Query: 345 DKCV-ALILSACE 356
V L+ CE
Sbjct: 416 LNTVQTLVWGFCE 428
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/186 (19%), Positives = 68/186 (36%), Gaps = 48/186 (25%)
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ--- 295
D + +++ + G ++ +++EM + + Y L++GY + G +E AQ
Sbjct: 86 DSVCFNTVINGWCNEGQMEEAMRVVQEMRQKNCRPTTSTYNTLIKGYGVAGQAEQAQQLV 145
Query: 296 ---------------------------------------------RVFEAIQFAGITPDA 310
RV I+ AG+ PDA
Sbjct: 146 LHLLNKTRNSPSSEDGLEPVARPNLRTMNTLLNAWCREGRLEEAWRVVAMIKSAGMQPDA 205
Query: 311 RMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLID 370
L AY AG+ + +M+ A L+P+ + A+++S + R L+ L
Sbjct: 206 VTYNTLAKAYAAAGRVAELEDLIADMKNARLKPNLRTYAILISCYCQNGMPERGLQLLSR 265
Query: 371 LERDGF 376
L+ +G
Sbjct: 266 LKFEGL 271
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 85/174 (48%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y +++ + K +++ A + MKR G + + VT + V + K G ++ A + F
Sbjct: 263 DVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLF 322
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++++ G ++ +Y +V +AG LD VL EM Q V + Y L+ G
Sbjct: 323 AQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKE 382
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G A+ VF ++ AGI + + LI+ + + S++A + M+ G+E
Sbjct: 383 GKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGME 436
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 97/225 (43%), Gaps = 1/225 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++++ N+ YT ++ G K+ ++ AE+ M+R G +++ T ++ + N
Sbjct: 360 MVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKN 419
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A E+K G LD YG+++ LD + LL +MD + + +Y
Sbjct: 420 SERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTN 479
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ A + + + +G P+ L++ AG +A + F M G
Sbjct: 480 IMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLG 539
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCT 385
LEP+ + ++ K +L++A+ L+D D M CT
Sbjct: 540 LEPNVQAYTALVDGLCKNGRLDKAV-LLLDEMIDKGMSLDNVVCT 583
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 92/222 (41%), Gaps = 2/222 (0%)
Query: 157 AELA--LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
+ELA L E+ N+ + +I K+ + A L MK G D VT ++
Sbjct: 179 SELAWRLFEQLPAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDG 238
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
Y K G L+ E+ E++ G D +Y ++V + + G ++R EM + V
Sbjct: 239 YGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMAN 298
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+ + + NG A ++F ++ G+ P+ L++ AG+ A
Sbjct: 299 VVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTN 358
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
M + G+ + +++ KE ++ A + +ER G
Sbjct: 359 EMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGI 400
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 82/192 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT I+ K + A L M GF + VT +V KAG++ A F ++
Sbjct: 477 YTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMV 536
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
LG + ++Y ++V + G LD+ +LL EM + + + + V +L+ G+ GN +
Sbjct: 537 DLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQ 596
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + +G+ D + + Q+A M + G+ P ++
Sbjct: 597 DAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLI 656
Query: 353 SACEKENQLNRA 364
+ C+K + A
Sbjct: 657 NKCQKLGNMEEA 668
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 77/172 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT ++ G K ++ +A M ++G + VT TV+V K G + AE+ F ++
Sbjct: 337 YTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLME 396
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G ++ Y +++ + +R LL EM + + + +Y AL+ G +
Sbjct: 397 RAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLD 456
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A+ + + G+ P+ + +++A A + +A Q M +G P+
Sbjct: 457 EAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPN 508
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 56/134 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ E N++ YT ++ G K ++ A L M +G D V T ++ + K GN
Sbjct: 535 MVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGN 594
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ A ++ G LD Y V + M+ +L EM + + VY
Sbjct: 595 LQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNC 654
Query: 281 LLRGYSMNGNSEGA 294
L+ GN E A
Sbjct: 655 LINKCQKLGNMEEA 668
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 101/246 (41%), Gaps = 3/246 (1%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ YT II G K NA L M+ +G D V ++ K A
Sbjct: 172 FAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAM 231
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E+ G P + +Y S++ + G L+ L ++M + V + + L+ G
Sbjct: 232 YFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGL 291
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
G A+RVFE + G+ PDA + L++ Y + Q +A F M G PS
Sbjct: 292 CKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSV 351
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ ++++ K +LN A L ++ TL F + G + + + +E
Sbjct: 352 RVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKE 411
Query: 406 ---YGL 408
YGL
Sbjct: 412 MCSYGL 417
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 87/208 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++++ N+ Y+ I+HG+ Q+ A + M R + + VT T++V K G
Sbjct: 237 MVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGM 296
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A FE + G D +Y +++ Y +D + L M + VY
Sbjct: 297 ILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNI 356
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G+ + A+ + + +TPD + L+ + AG+ Q A F+ M G
Sbjct: 357 LINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYG 416
Query: 341 LEPSDKCVALILSACEKENQLNRALEFL 368
L P +++L K L+ A L
Sbjct: 417 LLPDSITYSILLDGLCKHGHLDEAFRLL 444
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 86/184 (46%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + F ++R Y +I+G+ K ++ A+ L M R D VT + ++ + +AG
Sbjct: 342 MVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGR 401
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++A++ F+E+ G D +Y ++ + G LD LL+ M ++ +Y
Sbjct: 402 PQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNI 461
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L++G G E A+ +F + GI P ++I+ G S +A F+ M G
Sbjct: 462 LIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNG 521
Query: 341 LEPS 344
P+
Sbjct: 522 CLPN 525
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 40/208 (19%), Positives = 89/208 (42%), Gaps = 6/208 (2%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+ +++G K +I +A + + GF +T T ++ K G+ A + ++++
Sbjct: 144 FGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKME 203
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +++ + + + EM Q + Y ++L G+ G
Sbjct: 204 EKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLN 263
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +F+ + + P+ +L++ G +A F+ M + G+EP + ++
Sbjct: 264 EATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALM 323
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGK 380
++Q++ A + L D+ MVGK
Sbjct: 324 DGYCLQSQMDEAQK-LFDI-----MVGK 345
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/206 (18%), Positives = 81/206 (39%), Gaps = 18/206 (8%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRD 172
++P+T S L+ + + +P+ A L+ ++ LL +S
Sbjct: 382 LTPDTVTYSTLMQGFCQAGRPQVA-------------QKLFKEMCSYGLLPDSIT----- 423
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ ++ G K + A L AM+ +++ G L+ A E F +
Sbjct: 424 YSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLF 483
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ G +Y M+ ++ G+ + + R+M S Y ++G+ NG+
Sbjct: 484 VKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPS 543
Query: 293 GAQRVFEAIQFAGITPDARMCALLIN 318
A R+ E + G + D+ +L++
Sbjct: 544 NAVRLIEEMVGRGFSADSSTFQMLLD 569
>gi|222630937|gb|EEE63069.1| hypothetical protein OsJ_17877 [Oryza sativa Japonica Group]
Length = 702
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 96/210 (45%), Gaps = 1/210 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG-NLKMAEET 227
++R YT ++H + + + A ++R+G + VT V++ +Y + G +
Sbjct: 88 DVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVAL 147
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
EE++ G D + +++ A R G+LD+ ++ A+ Y ALL+ +
Sbjct: 148 LEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGK 207
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
GN A RV + ++ +G PDA L Y AG ++A M GL P+
Sbjct: 208 AGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFT 267
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFM 377
+++A +++ AL ++++G++
Sbjct: 268 YNTVMTAYANVGRVDEALALFDRMKKNGYV 297
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 105/244 (43%), Gaps = 12/244 (4%)
Query: 159 LALLEESFEANIR--DYT--KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
+ALLEE A + D+T +I G+ + A +K RG + VT ++ +
Sbjct: 145 VALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQV 204
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
+ KAGN A +E++ G D +Y + Y RAG + L M ++ +
Sbjct: 205 FGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPN 264
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTA-- 332
+ Y ++ Y+ G + A +F+ ++ G P+ L+ + M G+ + +TA
Sbjct: 265 TFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLI---FGMLGKKSR-FTAML 320
Query: 333 --FQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWF 390
+ M ++G P+ +L+ C K + L ++ G + ++ TL + +
Sbjct: 321 EMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAY 380
Query: 391 KRLG 394
R G
Sbjct: 381 GRCG 384
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 80/187 (42%)
Query: 185 QIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYG 244
+++ E +K +G+ D V M+ MY+K G A E F+ IK G D +Y
Sbjct: 490 RLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYN 549
Query: 245 SMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFA 304
S++ Y ++ E +L+++ + +V Y ++ G+ G + AQR+ +
Sbjct: 550 SLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIAD 609
Query: 305 GITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
G+ P L+ Y +A M L+P + ++ + K + + A
Sbjct: 610 GMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEA 669
Query: 365 LEFLIDL 371
EFL ++
Sbjct: 670 REFLSEI 676
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 78/189 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y ++ Y ++ A MK+ G++ + T ++ M K E
Sbjct: 264 NTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEML 323
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
EE+ G ++ ++ +M+ + GM D +L M + V + + Y L+ Y
Sbjct: 324 EEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRC 383
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G+ A ++++ + +G TP L+N G A + M K G +P+D+
Sbjct: 384 GSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSY 443
Query: 349 ALILSACEK 357
+L+L K
Sbjct: 444 SLLLQCYAK 452
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 1/129 (0%)
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAF-QNM 336
Y +L S G E A ++F ++ G+ P ++++ Y G+S A + M
Sbjct: 92 YTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEM 151
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVV 396
R AG+EP D + +++AC ++ L++A+ F DL+ G + L F + G
Sbjct: 152 RAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNY 211
Query: 397 EEVEHVLRE 405
E VL+E
Sbjct: 212 TEALRVLKE 220
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 80/202 (39%), Gaps = 2/202 (0%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLL-GEPLDKRSYGSMVMAYVRAGMLDRGEVL 262
D L ++V + G + + +E+ L G LD R+Y +++ A RAG +R L
Sbjct: 52 DAAALEMVVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQL 111
Query: 263 LREMDAQEVYVGSEVYKALLRGYSMNGNS-EGAQRVFEAIQFAGITPDARMCALLINAYQ 321
E+ Q V Y +L Y G S + E ++ AG+ PD + +I A
Sbjct: 112 FAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACG 171
Query: 322 MAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKE 381
G +A F++++ G P +L K AL L ++E G
Sbjct: 172 RDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAV 231
Query: 382 ASCTLAAWFKRLGVVEEVEHVL 403
LA + R G EE L
Sbjct: 232 TYNELAGTYARAGFFEEAAKCL 253
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/243 (18%), Positives = 106/243 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ F + Y +++ ++ A++ + M + GF + + ++++ Y+K GN
Sbjct: 396 MISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGN 455
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
E +E+ + ++V+A + L+ E +E+ AQ ++ +
Sbjct: 456 AAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNS 515
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+L Y+ NG A +F++I+ +G++PD L++ Y + +S +A + ++ +
Sbjct: 516 MLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQ 575
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
++P +++ K+ + A L ++ DG TL + L + E
Sbjct: 576 VKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAR 635
Query: 401 HVL 403
V+
Sbjct: 636 EVV 638
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 45/268 (16%), Positives = 89/268 (33%), Gaps = 35/268 (13%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ +GK A L M+ G D VT + Y++AG + A + + +
Sbjct: 198 YNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMT 257
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +Y +++ AY G +D L M Y +
Sbjct: 258 SKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFT 317
Query: 293 GAQRVFEAIQFAGITPD--------------------------ARMCAL---------LI 317
+ E + +G TP+ + C + LI
Sbjct: 318 AMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLI 377
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
+AY G A+ + M +G P +L+ ++ + A + + ++GF
Sbjct: 378 SAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFK 437
Query: 378 VGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ L + + G +E + +E
Sbjct: 438 PNDQSYSLLLQCYAKGGNAAGIESIEKE 465
>gi|357502615|ref|XP_003621596.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496611|gb|AES77814.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 99/224 (44%), Gaps = 3/224 (1%)
Query: 155 QVAELALLEESFEANIRD---YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
+ A+ L E + +RD Y + K QI A L M R VT + M
Sbjct: 301 ETAQKLLSEMDQKGIVRDAFTYNTYLDTLCKGGQIDLARRVLEEMSSRRVWPTVVTYSTM 360
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ +KA L+ A +EE+KL +D+ SY +MV Y + G D +EM++ +
Sbjct: 361 IDGCAKANLLEDALNLYEEMKLRSISVDRVSYNTMVGIYAKLGRFDEAIGQCKEMESCGM 420
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
Y ALL GY G + +R+FE ++ I P+ + +I+ Y G Q+A
Sbjct: 421 KRDVVTYNALLSGYGRYGMYDEVRRLFEEMKAWNIYPNTLTYSTMIDVYTKGGMFQEAMD 480
Query: 332 AFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+++ +KA LE I+ + K + ++ LI + G
Sbjct: 481 VYKDFKKAQLEVDVVFYTSIIDSLCKNGLVESSIMLLIAMIEKG 524
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 83/189 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I G K +++A N MK R D+V+ MV +Y+K G A +E++
Sbjct: 357 YSTMIDGCAKANLLEDALNLYEEMKLRSISVDRVSYNTMVGIYAKLGRFDEAIGQCKEME 416
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +++ Y R GM D L EM A +Y + Y ++ Y+ G +
Sbjct: 417 SCGMKRDVVTYNALLSGYGRYGMYDEVRRLFEEMKAWNIYPNTLTYSTMIDVYTKGGMFQ 476
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A V++ + A + D +I++ G + + M + G++P+ I+
Sbjct: 477 EAMDVYKDFKKAQLEVDVVFYTSIIDSLCKNGLVESSIMLLIAMIEKGIKPNVVTFNSII 536
Query: 353 SACEKENQL 361
A + L
Sbjct: 537 DASRQSPTL 545
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 93/227 (40%), Gaps = 3/227 (1%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKL 233
+ +I G+ +I +A + + G + + M+ Y + G+ A + F ++
Sbjct: 182 STMIGTLGRLGEINHALRLFESARLEGHGNTVYSFSAMISAYGRNGHFSDAVDLFRSMRS 241
Query: 234 LGEPLDKRSYGSMVMAYVRAGMLDRGEVL--LREMDAQEVYVGSEVYKALLRGYSMNGNS 291
G + SY S++ A + G +D V+ EM A+ + Y +LL + G
Sbjct: 242 WGVYPNLISYNSLIDAGAK-GEVDFDVVVKFFDEMLAEGIVPDRLTYNSLLSVCASKGMW 300
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALI 351
E AQ++ + GI DA ++ GQ A + M + P+ + +
Sbjct: 301 ETAQKLLSEMDQKGIVRDAFTYNTYLDTLCKGGQIDLARRVLEEMSSRRVWPTVVTYSTM 360
Query: 352 LSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
+ C K N L AL +++ V + + T+ + +LG +E
Sbjct: 361 IDGCAKANLLEDALNLYEEMKLRSISVDRVSYNTMVGIYAKLGRFDE 407
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 42/222 (18%), Positives = 90/222 (40%), Gaps = 26/222 (11%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y ++ GYG+ MK + +T + M+ +Y+K G + A + +
Sbjct: 423 DVVTYNALLSGYGRYGMYDEVRRLFEEMKAWNIYPNTLTYSTMIDVYTKGGMFQEAMDVY 482
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG---- 284
++ K +D Y S++ + + G+++ +LL M + + + +++
Sbjct: 483 KDFKKAQLEVDVVFYTSIIDSLCKNGLVESSIMLLIAMIEKGIKPNVVTFNSIIDASRQS 542
Query: 285 ----YSMNGNSEGAQRVFEAIQ-------FAGITPDARMCALLIN-AYQMAGQSQKAYTA 332
Y ++G+S+ + E + F T D R+ + A + AG +K
Sbjct: 543 PTLEYGVHGSSQAVEYPTEQLSSMLIDGAFQNKTGDDRILKMFEQLAAEKAGHREKDRKG 602
Query: 333 ----------FQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
FQ M + ++P+ + IL+AC + N A
Sbjct: 603 RQDQHCILWLFQKMHELNIKPNVVTFSAILNACSRCNSFEDA 644
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 63/163 (38%), Gaps = 8/163 (4%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ Y K + A M+ G D VT ++ Y + G FEE+K
Sbjct: 392 YNTMVGIYAKLGRFDEAIGQCKEMESCGMKRDVVTYNALLSGYGRYGMYDEVRRLFEEMK 451
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ +Y +M+ Y + GM + ++ ++ V Y +++ NG E
Sbjct: 452 AWNIYPNTLTYSTMIDVYTKGGMFQEAMDVYKDFKKAQLEVDVVFYTSIIDSLCKNGLVE 511
Query: 293 GAQRVFEAIQFAGITPDARMCALLINA--------YQMAGQSQ 327
+ + A+ GI P+ +I+A Y + G SQ
Sbjct: 512 SSIMLLIAMIEKGIKPNVVTFNSIIDASRQSPTLEYGVHGSSQ 554
>gi|242078641|ref|XP_002444089.1| hypothetical protein SORBIDRAFT_07g007540 [Sorghum bicolor]
gi|241940439|gb|EES13584.1| hypothetical protein SORBIDRAFT_07g007540 [Sorghum bicolor]
Length = 942
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 96/217 (44%), Gaps = 1/217 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++++ AN ++ YGK AE + +++G + D ++ ++ Y+K+GN
Sbjct: 721 MIQQGHLANTVTLNVLLDIYGKAGLFNRAEKVFIMARKQG-LADIISYNTIIAAYAKSGN 779
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ ++ G P+ +Y M+ AY +AG L+ +L++M + Y
Sbjct: 780 FHSMNYFVQMMQDAGFPVSPEAYNCMLDAYGKAGQLEEFASVLQKMKRAKCKFDHYTYNI 839
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ Y G E V ++ G+ PD LI AY +A + A Q MR G
Sbjct: 840 MINIYGRRGWIEDVSNVLAELKDRGVVPDLYSYNTLIKAYGIARMPEDAVKLMQEMRIKG 899
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
+ P A +++A ++ A+++ + + + G +
Sbjct: 900 ISPDRVTYANLIAALQRNENFLEAVKWSLWMRQTGVV 936
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/243 (19%), Positives = 105/243 (43%), Gaps = 5/243 (2%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+LE + N+ + ++ Y K ++ AE T M+ C + M+ +Y++ G
Sbjct: 267 MLEREVQPNLSTFGMLMVLYQKTGKLSEAEFTFQKMRNCNIKCVN-AYSAMITLYTRLGL 325
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+E+T + G + ++ + Y + G ++ E++L+ M + + Y
Sbjct: 326 FAKSEDTINLMNNDGLVPNMENWLVRLNVYCQQGKMEEAELVLQSMVDEGFTLNIVAYNT 385
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ GY + + + A RVF+++ AG+ PD ++ + A ++A ++ ++ AG
Sbjct: 386 LITGYGKSSDVQKANRVFDSLGSAGLAPDETTYRSMVEGFGRANIYEEAILYYRKLKGAG 445
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
P+ +++ + + A E + D+ G + S + + G V +
Sbjct: 446 FRPNASNFYTMINLLARRDDNETAAEIMEDMR----AAGCQCSSIVTVLVRAYGAVGRMH 501
Query: 401 HVL 403
VL
Sbjct: 502 KVL 504
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 110/277 (39%), Gaps = 9/277 (3%)
Query: 133 PRRADWLAVL----KQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQN 188
P +WL L +Q K+ E L LQ ++++E F NI Y +I GYGK +Q
Sbjct: 343 PNMENWLVRLNVYCQQGKMEEAELVLQ----SMVDEGFTLNIVAYNTLITGYGKSSDVQK 398
Query: 189 AENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVM 248
A ++ G D+ T MV + +A + A + ++K G + ++ +M+
Sbjct: 399 ANRVFDSLGSAGLAPDETTYRSMVEGFGRANIYEEAILYYRKLKGAGFRPNASNFYTMIN 458
Query: 249 AYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITP 308
R + ++ +M A S + L+R Y G + +A I
Sbjct: 459 LLARRDDNETAAEIMEDMRAAGCQC-SSIVTVLVRAYGAVGRMHKVLPILQACFNKKILF 517
Query: 309 DARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFL 368
DA C++L+ ++ ++A + + D +++ +C++ N A+
Sbjct: 518 DATSCSILVTSFVQKSLLEEALYILREKKWKDSAFEDNLYHMLICSCKEGGSYNDAVRIY 577
Query: 369 IDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ + SCT+ F + + E + E
Sbjct: 578 NQMPKSETHPNPRISCTMIDVFSMMKRFADAEAIYLE 614
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 40/212 (18%), Positives = 89/212 (41%), Gaps = 9/212 (4%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN----L 221
F N ++ +I+ ++ + A + M+ G C + +TV+V Y G L
Sbjct: 446 FRPNASNFYTMINLLARRDDNETAAEIMEDMRAAGCQCSSI-VTVLVRAYGAVGRMHKVL 504
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
+ + F + K+L D S +V ++V+ +L+ +LRE ++ +Y L
Sbjct: 505 PILQACFNK-KIL---FDATSCSILVTSFVQKSLLEEALYILREKKWKDSAFEDNLYHML 560
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+ G+ A R++ + + P+ R+ +I+ + M + A + ++ +
Sbjct: 561 ICSCKEGGSYNDAVRIYNQMPKSETHPNPRISCTMIDVFSMMKRFADAEAIYLELKASAS 620
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLER 373
++I+ K +L A L ++E+
Sbjct: 621 VLDMIAYSVIVRMYIKAQRLEDACSILAEMEK 652
>gi|147778634|emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
Length = 1494
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 91/200 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +++ + ++ + + M + GF D++T ++ MY K G +A + + ++K
Sbjct: 399 YNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMK 458
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
L G D +Y ++ + +A M+ ++ EM V + AL+ GY+ G
Sbjct: 459 LSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNAXVKPTLRTFSALICGYAKAGKRV 518
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ F+ + +GI PD +++++ +S KA +Q M +P ++L
Sbjct: 519 EAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVML 578
Query: 353 SACEKENQLNRALEFLIDLE 372
KEN+ + + D+E
Sbjct: 579 RVLGKENREEDVHKVVKDME 598
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 89/181 (49%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
++ G D+ T +++MY + + E++ +G +Y S++ A+ + M
Sbjct: 980 IQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQM 1039
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
+++ E L + ++E + Y +++ + +GN A+++ ++ AG+ P L
Sbjct: 1040 VEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHL 1099
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
L+ +Y +GQ ++A N++ GL S + ++ A K N A++ L+++++DG
Sbjct: 1100 LMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDG 1159
Query: 376 F 376
Sbjct: 1160 L 1160
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 86/195 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I YG+ + A ++ +GF+ D VT ++ +++ GN+ +E E++
Sbjct: 364 YNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMV 423
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+G D+ +Y +++ Y + G D L +M + Y L+ +
Sbjct: 424 KMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIK 483
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A V + A + P R + LI Y AG+ +A F M ++G++P +++L
Sbjct: 484 EAAEVMSEMLNAXVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVML 543
Query: 353 SACEKENQLNRALEF 367
+ N+ +A++
Sbjct: 544 DILLRFNESGKAMKL 558
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 79/176 (44%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
++R G D +T ++ S+ NL+ A + + ++ D +Y +M+ Y R GM
Sbjct: 317 VRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGM 376
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
L ++++++ + Y +LL ++ GN + + + E + G D
Sbjct: 377 SREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNT 436
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDL 371
+I+ Y GQ A+ + +M+ +G P +++ + K N + A E + ++
Sbjct: 437 IIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEM 492
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 90/224 (40%), Gaps = 2/224 (0%)
Query: 154 LQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVV 213
L V A E + ++ Y ++ Y + + + L M+ RG D V+ ++
Sbjct: 238 LAVEIFARAEAAXGNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLIN 297
Query: 214 MYSKAGNL--KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
K+G + +A E E++ G D +Y +++ A R L+ + +M A
Sbjct: 298 ARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRC 357
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
Y A++ Y G S A R+F+ ++ G PDA L+ A+ G K
Sbjct: 358 QPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKE 417
Query: 332 AFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
++M K G + I+ K Q + A + D++ G
Sbjct: 418 ICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSG 461
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 101/250 (40%), Gaps = 2/250 (0%)
Query: 128 VRFMKPRRADWLAVLKQLK-LMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQI 186
V KP + W +VLK + + QV +L + E + + Y +I Y + +
Sbjct: 947 VAXFKPDLSIWNSVLKLYTGIGDFKKTGQVYQL-IQEAGLKPDEDTYNTLILMYCRDRRP 1005
Query: 187 QNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSM 246
+ + + M+R G T ++ + K ++ AEE FE + LD+ Y M
Sbjct: 1006 EEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIM 1065
Query: 247 VMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGI 306
+ + +G + E LL M V L+ YS +G E A++V + ++ G+
Sbjct: 1066 MKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGL 1125
Query: 307 TPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALE 366
+ +I+AY G A M+K GLEP + + A + A+
Sbjct: 1126 PLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRIWTCFVRAASLSQHTSEAIV 1185
Query: 367 FLIDLERDGF 376
L L GF
Sbjct: 1186 LLKALRDTGF 1195
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 83/175 (47%), Gaps = 12/175 (6%)
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
GF + ++T+M+ ++ AGN+ ++ ++ +K G + +M + + G+L +G
Sbjct: 879 GFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAG------YFPTMHLYRIMIGLLAKG 932
Query: 260 ------EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
E ++ EM+ ++ ++L+ Y+ G+ + +V++ IQ AG+ PD
Sbjct: 933 KRVRDVEAMVSEMEVAXFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTY 992
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFL 368
LI Y + ++ + MR+ GLEP ++SA K + +A E
Sbjct: 993 NTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELF 1047
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 97/228 (42%), Gaps = 14/228 (6%)
Query: 159 LALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
L+L+ E E + Y +I +GK ++ AE + + D+ +M+ M
Sbjct: 1009 LSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKM 1068
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
+ +GN AE+ +K G + ++++Y +G + E +L + + + +
Sbjct: 1069 FRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLS 1128
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+ Y +++ Y NG+ A + ++ G+ PD R+ + A ++ + +A +
Sbjct: 1129 TLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRIWTCFVRAASLSQHTSEAIVLLK 1188
Query: 335 NMRKAGL--------EPSDKCVALILSACEKENQL--NRALEFLIDLE 372
+R G E SD V+ + + EK L N A F+ LE
Sbjct: 1189 ALRDTGFDLPIRLLTEKSDSLVSEVDNCLEKLGPLEDNAAFNFVNALE 1236
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 92/204 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I K ++++ E + M+ F D ++ +Y+ G+ K + ++ I+
Sbjct: 922 YRIMIGLLAKGKRVRDVEAMVSEMEVAXFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQ 981
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D+ +Y ++++ Y R + G L+ EM + + YK+L+ + E
Sbjct: 982 EAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVE 1041
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ +FE + D +++ ++ +G KA M++AG+EP+ + L++
Sbjct: 1042 QAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLM 1101
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
+ Q A + L +L+ +G
Sbjct: 1102 VSYSGSGQPEEAEKVLDNLKVEGL 1125
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/290 (19%), Positives = 116/290 (40%), Gaps = 41/290 (14%)
Query: 150 HPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLT 209
H L Q E LL + ++ +T +I YGK Q AE+ + +++++ + D+
Sbjct: 763 HYLIDQAEEKGLLFD----DVSIHTGVIEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWN 818
Query: 210 VMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQ 269
++ Y+ +G + A F + G S ++ A + G LD V+++E+
Sbjct: 819 ALIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQELQDM 878
Query: 270 EVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA---------- 319
+ +L ++ GN +++++ ++ AG P + ++I
Sbjct: 879 GFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDV 938
Query: 320 -------------------------YQMAGQSQKAYTAFQNMRKAGLEPS-DKCVALILS 353
Y G +K +Q +++AGL+P D LIL
Sbjct: 939 EAMVSEMEVAXFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILM 998
Query: 354 ACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
C ++ + L + ++ R G + +L + F +L +VE+ E +
Sbjct: 999 YC-RDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELF 1047
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 35/175 (20%), Positives = 73/175 (41%), Gaps = 5/175 (2%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVV-MYSKAGNLKMAEETFEEI 231
Y ++ Y K + A + + +G + D V++ V+ Y K + AE +
Sbjct: 746 YRSMVVTYCKMGFPETAHYLIDQAEEKGLLFDDVSIHTGVIEAYGKLKLWQKAESLVGSL 805
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM--DAQEVYVGSEVYKALLRGYSMNG 289
+ +D++ + +++ AY +G +R + M D V S L++ ++G
Sbjct: 806 RQKCTMVDRKVWNALIHAYAASGCYERARAIFNTMMRDGPSPTVDS--VNGLMQALIVDG 863
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
+ V + +Q G L+++A+ AG + +Q M+ AG P+
Sbjct: 864 RLDELYVVIQELQDMGFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAGYFPT 918
>gi|414878623|tpg|DAA55754.1| TPA: hypothetical protein ZEAMMB73_281441 [Zea mays]
Length = 891
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 91/227 (40%), Gaps = 35/227 (15%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK---------- 222
Y +I G K+M+++ AE L R G D + + ++ + K GNL+
Sbjct: 212 YNMVIDGLCKEMKLKEAEKVLEIKTRHGSAPDLYSYSYLIHSHCKMGNLEKAWYHVEDMV 271
Query: 223 ----------------------MAEET---FEEIKLLGEPLDKRSYGSMVMAYVRAGMLD 257
M E F++ + LG LD Y + AY + G ++
Sbjct: 272 SHGIEINCYIVAYLLQCLRKLGMVSEVIVHFQKFRDLGVHLDGVLYNIAMDAYCKLGNMN 331
Query: 258 RGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
LL EM A + Y L+ GY + G +E A +VFE + A I PD +L
Sbjct: 332 EAVKLLNEMMAGSLVPDKIHYTCLINGYCLKGETENAWQVFEEMLKANIKPDVVTYNILA 391
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
+ Y G K + ++M GLEP+ + ++ + L+ A
Sbjct: 392 SGYSRNGLVMKVFDILEHMMDQGLEPNSLTYGIAIAGFCRGGNLSEA 438
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 17/200 (8%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+LE++ ++ Y+K+I Y + + NA M RG + D + TV++ Y K G
Sbjct: 515 MLEKNVVPDVISYSKLISAYCQTRDMHNARLWFHDMVERG-LSDVIVYTVLMNGYCKVGR 573
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLD----------------RGEVLLR 264
L+ A E F ++ LG D +Y ++ +++ + + +VLL
Sbjct: 574 LQEACELFVQMINLGIKPDVVAYTVLLDGHLKETLQQGWQGIAKERRTFFLRTKHKVLLN 633
Query: 265 EMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAG 324
M E+ Y L+ G E A+ +F+ + G+ PD LIN Y G
Sbjct: 634 SMKDMEIEPDVTCYTVLIDGRCKAEYLEEARGLFDEMLAKGLIPDVHTYTALINGYCSQG 693
Query: 325 QSQKAYTAFQNMRKAGLEPS 344
+ KA FQ M G++P
Sbjct: 694 EIAKAEDLFQEMIAKGMKPD 713
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 90/202 (44%), Gaps = 1/202 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I+GY K + +NA M + D VT ++ YS+ G + + E +
Sbjct: 352 YTCLINGYCLKGETENAWQVFEEMLKANIKPDVVTYNILASGYSRNGLVMKVFDILEHMM 411
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +YG + + R G L EVL ++ + + + +Y +++ GY +G ++
Sbjct: 412 DQGLEPNSLTYGIAIAGFCRGGNLSEAEVLFNIVEERGIDNINVLYGSMVCGYLHSGWTD 471
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +F + G D C+ LIN + +A T + M + + P + ++
Sbjct: 472 HAYMLFLRVAKQGNMVDRLSCSKLINGLCRDEKVGEASTVCKMMLEKNVVPDVISYSKLI 531
Query: 353 SA-CEKENQLNRALEFLIDLER 373
SA C+ + N L F +ER
Sbjct: 532 SAYCQTRDMHNARLWFHDMVER 553
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 84/215 (39%), Gaps = 5/215 (2%)
Query: 161 LLEESFEANIR----DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS 216
+ EE +ANI+ Y + GY + + + L M +G + +T + + +
Sbjct: 371 VFEEMLKANIKPDVVTYNILASGYSRNGLVMKVFDILEHMMDQGLEPNSLTYGIAIAGFC 430
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
+ GNL AE F ++ G YGSMV Y+ +G D +L + Q V
Sbjct: 431 RGGNLSEAEVLFNIVEERGIDNINVLYGSMVCGYLHSGWTDHAYMLFLRVAKQGNMVDRL 490
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
L+ G + A V + + + PD + LI+AY A F +M
Sbjct: 491 SCSKLINGLCRDEKVGEASTVCKMMLEKNVVPDVISYSKLISAYCQTRDMHNARLWFHDM 550
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDL 371
+ GL L+ C K +L A E + +
Sbjct: 551 VERGLSDVIVYTVLMNGYC-KVGRLQEACELFVQM 584
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 71/192 (36%), Gaps = 13/192 (6%)
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPL------DKRSYGSMVMAYVRA 253
G D V + + Y K GN+ E +KLL E + DK Y ++ Y
Sbjct: 309 GVHLDGVLYNIAMDAYCKLGNMN------EAVKLLNEMMAGSLVPDKIHYTCLINGYCLK 362
Query: 254 GMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
G + + EM + Y L GYS NG + E + G+ P++
Sbjct: 363 GETENAWQVFEEMLKANIKPDVVTYNILASGYSRNGLVMKVFDILEHMMDQGLEPNSLTY 422
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
+ I + G +A F + + G++ + ++ + A + + +
Sbjct: 423 GIAIAGFCRGGNLSEAEVLFNIVEERGIDNINVLYGSMVCGYLHSGWTDHAYMLFLRVAK 482
Query: 374 DGFMVGKEASCT 385
G MV + SC+
Sbjct: 483 QGNMVDR-LSCS 493
>gi|15233383|ref|NP_193806.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75211707|sp|Q9SVH3.1|PP328_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g20740
gi|5262214|emb|CAB45840.1| putative protein [Arabidopsis thaliana]
gi|7268870|emb|CAB79074.1| putative protein [Arabidopsis thaliana]
gi|332658957|gb|AEE84357.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 727
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 109/247 (44%), Gaps = 9/247 (3%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
+Y E L+EES + ++ G K +I+ L M+ D T M
Sbjct: 250 VYEDFKEDGLVEES-----TTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAM 304
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ GNL + ++E++ D +YG++V+ + G ++RG L EM +++
Sbjct: 305 IKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQI 364
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
+ E+Y+ L+ G+ +G A ++E + +G D + +I Q KAY
Sbjct: 365 LIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYK 424
Query: 332 AFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFK 391
FQ + LEP + ++ I+ A +NR +F LER G +G S L +FK
Sbjct: 425 LFQVAIEEELEPDFETLSPIMVAYV---VMNRLSDFSNVLERIG-ELGYPVSDYLTQFFK 480
Query: 392 RLGVVEE 398
L EE
Sbjct: 481 LLCADEE 487
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 55/137 (40%), Gaps = 2/137 (1%)
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y A + NG+ A ++ E + G P + +LI + + + Y ++ M+
Sbjct: 161 YNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMK 220
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
K G +P I+ A K + AL D + DG + L + G +E
Sbjct: 221 KFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIE 280
Query: 398 EVEHVLREYGLRETYSK 414
E+ +L+ +RE K
Sbjct: 281 EMLEILQR--MRENLCK 295
>gi|255551485|ref|XP_002516788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543876|gb|EEF45402.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 710
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 101/230 (43%), Gaps = 16/230 (6%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+++ +E N +I G G+ M + + L A+ + GF C + ++ +Y+ G
Sbjct: 320 SMISAGWEPNDVMMVDLISGCGRTMAMTEGQQLLSAVVKMGFDCYDFIQSTIIHLYAACG 379
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ A F +G + S+ +++ YVR M+DR L EM ++V+ +
Sbjct: 380 RINEACLQFR----IGSKENVASWNALIAGYVRNRMIDRAMELFNEMPERDVFS----WS 431
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
++ GY+ N A +F + +GI P+ +++A +G ++ A + +
Sbjct: 432 TMISGYTQNEQPNLALELFHKMVASGIKPNEVTMVSVLSAIATSGTLKEGRWAHEYVHNN 491
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAW 389
+ SD A I+ K +N ALE ++ +E + T++ W
Sbjct: 492 SITVSDNLSAAIIDMYAKCGSINNALEVFYEI--------REKASTVSPW 533
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 85/207 (41%), Gaps = 14/207 (6%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL---KMAEETFE 229
YT +I G+ + A M+ G + ++VT+ +V YS G + +M
Sbjct: 166 YTTMIMGFSQNECWNQAVELFKQMRNVGVVPNEVTIATLVSAYSHFGGIWACRMLHGLV- 224
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
IK+L E S + M Y L L EM + + + +L GYS G
Sbjct: 225 -IKMLFEEFVLVSTNLLRM-YCVCSSLVEARALFDEMPEKNIVS----WNVMLNGYSKAG 278
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
+ A+ VFE I D +I+ Y + +A +++M AG EP+D +
Sbjct: 279 FVDSARVVFERIP----NKDLVTWGTIIDGYVRVERINEALMMYRSMISAGWEPNDVMMV 334
Query: 350 LILSACEKENQLNRALEFLIDLERDGF 376
++S C + + + L + + GF
Sbjct: 335 DLISGCGRTMAMTEGQQLLSAVVKMGF 361
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 8/129 (6%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
+ + G + ++ MY K G L A+ F+ + D SY M+ YV++G
Sbjct: 92 VSKSGLGSNNFIQNSLINMYGKCGLLVDAKSIFD----VCPRSDPVSYNVMISGYVKSGQ 147
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
LD L EM + G Y ++ G+S N A +F+ ++ G+ P+ A
Sbjct: 148 LDYACELFDEMPVK----GCVSYTTMIMGFSQNECWNQAVELFKQMRNVGVVPNEVTIAT 203
Query: 316 LINAYQMAG 324
L++AY G
Sbjct: 204 LVSAYSHFG 212
>gi|357502623|ref|XP_003621600.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496615|gb|AES77818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 890
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 88/193 (45%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y+ ++ GY K +++A N MK R D+V+ +V +Y K GNL A E
Sbjct: 388 NVVTYSAMMDGYAKANLLEDALNLYEEMKLRSVCLDRVSYNTLVGIYEKLGNLDEAIEKC 447
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E++ G D +Y +++ Y + GM D L EM A+ +Y + Y ++ Y+
Sbjct: 448 KEMERSGINRDVVTYNALLSGYGKHGMYDEVRRLFEEMKARNIYPNTLTYSTMIDMYTKG 507
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
+ A V+ + A + D + +I+ G + + M + G++P+
Sbjct: 508 EMFQEAMDVYREFKMARLEIDVVFYSAIIDTLCKNGLMESSIMLLMAMMEKGIKPNVVTF 567
Query: 349 ALILSACEKENQL 361
I+ A ++ L
Sbjct: 568 NSIIDASQQSPTL 580
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 80/174 (45%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y + K QI A M + + VT + M+ Y+KA L+ A +
Sbjct: 353 DVFTYNTYLDTLCKAGQIDLARRVFEEMSSKRVWPNVVTYSAMMDGYAKANLLEDALNLY 412
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
EE+KL LD+ SY ++V Y + G LD +EM+ + Y ALL GY +
Sbjct: 413 EEMKLRSVCLDRVSYNTLVGIYEKLGNLDEAIEKCKEMERSGINRDVVTYNALLSGYGKH 472
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G + +R+FE ++ I P+ + +I+ Y Q+A ++ + A LE
Sbjct: 473 GMYDEVRRLFEEMKARNIYPNTLTYSTMIDMYTKGEMFQEAMDVYREFKMARLE 526
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 115/268 (42%), Gaps = 2/268 (0%)
Query: 146 KLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQ 205
+L E L L + E A LE + + + ++ +I +G+ + +A + +M G + +
Sbjct: 225 RLGEINLALGLFERARLE-GYGSTVHSFSAMISAFGRNGRFPDAVDLFRSMSSWGVVPNV 283
Query: 206 VTLTVMVVMYSKAG-NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLR 264
+T ++ +K + + + ++E+ G D+ +Y S++ GM + + LL
Sbjct: 284 ITYNSIIDAGAKGEVSFDVVVKFYDEMIANGLMPDRLTYNSLLSVCASKGMWEMAQKLLS 343
Query: 265 EMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAG 324
EMD + + Y L G + A+RVFE + + P+ + +++ Y A
Sbjct: 344 EMDHRCIVPDVFTYNTYLDTLCKAGQIDLARRVFEEMSSKRVWPNVVTYSAMMDGYAKAN 403
Query: 325 QSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASC 384
+ A ++ M+ + ++ EK L+ A+E ++ER G
Sbjct: 404 LLEDALNLYEEMKLRSVCLDRVSYNTLVGIYEKLGNLDEAIEKCKEMERSGINRDVVTYN 463
Query: 385 TLAAWFKRLGVVEEVEHVLREYGLRETY 412
L + + + G+ +EV + E R Y
Sbjct: 464 ALLSGYGKHGMYDEVRRLFEEMKARNIY 491
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 38/211 (18%), Positives = 84/211 (39%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M G + D++T ++ + + G +MA++ E+ D +Y + + +AG
Sbjct: 310 MIANGLMPDRLTYNSLLSVCASKGMWEMAQKLLSEMDHRCIVPDVFTYNTYLDTLCKAGQ 369
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
+D + EM ++ V+ Y A++ GY+ E A ++E ++ + D
Sbjct: 370 IDLARRVFEEMSSKRVWPNVVTYSAMMDGYAKANLLEDALNLYEEMKLRSVCLDRVSYNT 429
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
L+ Y+ G +A + M ++G+ +LS K + +++
Sbjct: 430 LVGIYEKLGNLDEAIEKCKEMERSGINRDVVTYNALLSGYGKHGMYDEVRRLFEEMKARN 489
Query: 376 FMVGKEASCTLAAWFKRLGVVEEVEHVLREY 406
T+ + + + +E V RE+
Sbjct: 490 IYPNTLTYSTMIDMYTKGEMFQEAMDVYREF 520
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 92/233 (39%), Gaps = 31/233 (13%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y ++ GYGK MK R + +T + M+ MY+K + A + +
Sbjct: 458 DVVTYNALLSGYGKHGMYDEVRRLFEEMKARNIYPNTLTYSTMIDMYTKGEMFQEAMDVY 517
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG---- 284
E K+ +D Y +++ + G+++ +LL M + + + +++
Sbjct: 518 REFKMARLEIDVVFYSAIIDTLCKNGLMESSIMLLMAMMEKGIKPNVVTFNSIIDASQQS 577
Query: 285 ----YSMNGNSEGAQRVFEAIQFAGITPDA---------RMCALLIN-AYQMAGQSQKAY 330
Y +NG+S+ E Q + I D R+ + A + AG +K
Sbjct: 578 PTLEYGVNGSSDAIDYPIE--QSSPIVIDGAFQNKPGEDRILKMFEQLAAEKAGHLKKNR 635
Query: 331 TA----------FQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
+ FQ M + ++P+ + IL+AC N A L+D R
Sbjct: 636 SGRQDKHCILWLFQKMHELNIKPNVVTFSAILNACSLCNSYEDA-SLLLDTLR 687
>gi|297848728|ref|XP_002892245.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338087|gb|EFH68504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 664
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 19/211 (9%)
Query: 193 LLAMKRRGFI-CDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRS---YGSMVM 248
L A + F+ CD +V MY+K G L A + FEE + + K S + +V
Sbjct: 148 LHAATLKNFVDCDSFVRVSLVDMYAKTGQLNHAFQVFEETP---DRIKKESILLWNVLVN 204
Query: 249 AYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITP 308
Y RA + L R M + S + L++GY NG A+++FE + P
Sbjct: 205 GYCRAKDMQMATTLFRSMPERN----SGSWSTLIKGYVDNGELNRAKQLFE------LMP 254
Query: 309 DARMCA--LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALE 366
+ + + LIN + G + A + + M + GL+P++ VA +LSAC K L +
Sbjct: 255 EKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTVAAVLSACSKSGALGSGIR 314
Query: 367 FLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
+ +G + + +L + + G V+
Sbjct: 315 IHGYILDNGIKLDRAIGTSLLDMYAKCGEVD 345
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 96/209 (45%), Gaps = 5/209 (2%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E E N+ +T +I+G+ + + A +T M +G ++ T+ ++ SK+G
Sbjct: 249 LFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTVAAVLSACSKSGA 308
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L I G LD+ S++ Y + G +D + M+ +++ + A
Sbjct: 309 LGSGIRIHGYILDNGIKLDRAIGTSLLDMYAKCGEVDCAATVFSNMNHKDILS----WTA 364
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR-KA 339
+++G++++G A + F + ++G PD + ++ A +G+ F +MR
Sbjct: 365 MIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSGEVDLGLNFFDSMRLDY 424
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFL 368
+EP+ K L++ + +L+ A E +
Sbjct: 425 AIEPTLKHYVLVVDLLGRAGKLDEAHELV 453
>gi|224111544|ref|XP_002315895.1| predicted protein [Populus trichocarpa]
gi|222864935|gb|EEF02066.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 80/181 (44%)
Query: 172 DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEI 231
D +++ K Q++ A+ M +RGF+ D + T+++ + + NL E + E+
Sbjct: 110 DVNRLLDTLCKSRQVERAQLVFDKMNKRGFVADIKSYTILLEGWGQEKNLSRLMEVYNEM 169
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
K G D +YG ++ A+ ++ D L EM+A+ +Y L+ G
Sbjct: 170 KDEGFEPDVVTYGILINAHCKSRRYDDAIELFHEMEAKNCKPSPHIYCTLINGLGAEKRL 229
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALI 351
A FE + +G P+A ++ AY + + MRK G+ PS + +I
Sbjct: 230 SEALEFFELSKASGFVPEAPTYNAVVGAYCWSERMDDVQRTIDEMRKGGVGPSARTYDII 289
Query: 352 L 352
L
Sbjct: 290 L 290
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 96/215 (44%), Gaps = 1/215 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
++ F+ + Y +I GK Q N + MK++G + ++ T ++ Y++A +K
Sbjct: 32 QKGFQYSTESYHALIESLGKIKQFNVIWNLVTDMKQKGLL-NKETFALISRRYARARKVK 90
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A + F +++ G ++ ++ ++ ++R +++ +M+ + + Y LL
Sbjct: 91 EAVDAFMKMEKFGLKIESSDVNRLLDTLCKSRQVERAQLVFDKMNKRGFVADIKSYTILL 150
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G+ N V+ ++ G PD +LINA+ + + A F M +
Sbjct: 151 EGWGQEKNLSRLMEVYNEMKDEGFEPDVVTYGILINAHCKSRRYDDAIELFHEMEAKNCK 210
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
PS +++ E +L+ ALEF + GF+
Sbjct: 211 PSPHIYCTLINGLGAEKRLSEALEFFELSKASGFV 245
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 74/171 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+G G + ++ A K GF+ + T +V Y + + + T +E++
Sbjct: 216 YCTLINGLGAEKRLSEALEFFELSKASGFVPEAPTYNAVVGAYCWSERMDDVQRTIDEMR 275
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G R+Y ++ +RAG + ++M + Y+ ++R + +
Sbjct: 276 KGGVGPSARTYDIILHHLIRAGKTKIAYSVFQKMSCEGCQPSVSTYEIIVRMFCNEDRVD 335
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
A +V++ ++ GI P M + LIN+ + +A FQ M G+ P
Sbjct: 336 MAIKVWDQMKAKGILPVMHMFSTLINSLCHESKLDEACMYFQEMLDVGIRP 386
>gi|168033824|ref|XP_001769414.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679334|gb|EDQ65783.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 410
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 91/215 (42%)
Query: 186 IQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGS 245
A L MK + + ++ T M+ ++G L A E FEE+K LG + +Y S
Sbjct: 152 FDTASQILKEMKAVNCLPNVISYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNS 211
Query: 246 MVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAG 305
++ AY R G ++ L M+ + Y ++ G A+ VF +Q G
Sbjct: 212 LLKAYAREGRYEKAMCLFVGMEDEGCIPDLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKG 271
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
TPD +++AY + +A + M++AG P ++L A K + A+
Sbjct: 272 CTPDRVTYNTMLDAYSKWSRRGRARDLLKTMKRAGCTPDLWTYNILLDAAGKAGSASEAM 331
Query: 366 EFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+ +L+ G + L + RLG EE E
Sbjct: 332 QIFHELKAAGHSPNLVSFSALINMYGRLGYFEEAE 366
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 95/228 (41%), Gaps = 9/228 (3%)
Query: 157 AELALLEESFEA--------NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTL 208
+L L E FE ++ YT ++ GY K+ ++ A AMK +G + +T
Sbjct: 44 GKLGLAREIFEGMSKAGVAPSVHAYTALLSGYAKQGLLKEAWALFEAMKEKGCSPNVLTY 103
Query: 209 TVMVVMYSK-AGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMD 267
++ +K A L FEE+K G + +Y MV A V + D +L+EM
Sbjct: 104 NTLINACTKRAYRLPDLVGLFEEMKQAGVQPNDITYNCMVNACVCLSLFDTASQILKEMK 163
Query: 268 AQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQ 327
A Y ++ +G + A +FE ++ G +P++ L+ AY G+ +
Sbjct: 164 AVNCLPNVISYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYE 223
Query: 328 KAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
KA F M G P ++ C + A ++++R G
Sbjct: 224 KAMCLFVGMEDEGCIPDLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKG 271
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 93/227 (40%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ YT +I+ G+ ++ A MK G + T ++ Y++ G + A F
Sbjct: 170 NVISYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLF 229
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ G D +Y +++ R G+ E + EM + Y +L YS
Sbjct: 230 VGMEDEGCIPDLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDAYSKW 289
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
A+ + + ++ AG TPD +L++A AG + +A F ++ AG P+
Sbjct: 290 SRRGRARDLLKTMKRAGCTPDLWTYNILLDAAGKAGSASEAMQIFHELKAAGHSPNLVSF 349
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGV 395
+ +++ + A +++ G + A C L + G+
Sbjct: 350 SALINMYGRLGYFEEAERAWVEMRATGCVPNATAYCGLMNSYSHHGM 396
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 11/160 (6%)
Query: 252 RAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDAR 311
R G L + M V Y ALL GY+ G + A +FEA++ G +P+
Sbjct: 42 REGKLGLAREIFEGMSKAGVAPSVHAYTALLSGYAKQGLLKEAWALFEAMKEKGCSPNVL 101
Query: 312 MCALLINAYQMAGQSQKAY------TAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
LINA +++AY F+ M++AG++P+D +++AC + + A
Sbjct: 102 TYNTLINA-----CTKRAYRLPDLVGLFEEMKQAGVQPNDITYNCMVNACVCLSLFDTAS 156
Query: 366 EFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ L +++ + + T+ R G ++E + E
Sbjct: 157 QILKEMKAVNCLPNVISYTTMINSLGRSGRLDEAVELFEE 196
>gi|403366299|gb|EJY82949.1| hypothetical protein OXYTRI_19434 [Oxytricha trifallax]
Length = 1420
Score = 70.1 bits (170), Expect = 2e-09, Method: Composition-based stats.
Identities = 55/226 (24%), Positives = 95/226 (42%), Gaps = 17/226 (7%)
Query: 164 ESFEANIRD--------YTKIIHGYGKKMQIQNAENTLLAMKRRGFI-CDQVTLTVMVVM 214
E FE RD +T +I G+ K ++ A MK I + VT ++
Sbjct: 792 EVFETMKRDGVQLNTIIFTTLIKGFAKSFKLDQALEVYQIMKMDDKIKPNNVTFNSLIDC 851
Query: 215 YSKAGNLKMAEETFEEIKLLGEPL-----DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQ 269
+ ++K A E FEE+K +P+ D +Y +M+ + R + + ++L +M+
Sbjct: 852 CIRCNSIKKAMEIFEEMK---QPISHTKPDLITYSTMIKGFCREKNIQQALIMLNDMEKN 908
Query: 270 EVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
+ +Y +LL G E A +V++ ++ I P ++LI Y KA
Sbjct: 909 NIMADEVLYNSLLDGCCKANEIEMALKVYKNMEILKIKPSNVTYSILIKIYGKQRNLPKA 968
Query: 330 YTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+ M+K G+ P +L C K QL A + D+ G
Sbjct: 969 LGVLEEMKKDGIRPGLIVYTCLLQTCIKSRQLKTAEQLFHDMRIQG 1014
Score = 66.6 bits (161), Expect = 2e-08, Method: Composition-based stats.
Identities = 56/236 (23%), Positives = 93/236 (39%), Gaps = 47/236 (19%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D+++ ++ ++ L++A E F +K+ + +Y S++ A VR L+ LL
Sbjct: 583 DEISFNTIIKGCAQEKKLQLAFEMFNLMKMQCLKPNDVTYNSLIDACVRCNRLNSAWQLL 642
Query: 264 REMDAQEVYVGSEVYKALLRGY-----SMNG------------------NSEG------- 293
EM + + Y L++G S NG S G
Sbjct: 643 SEMQQNNIVPDNFTYSTLIKGIRAENQSQNGISNPMDLEKAFALLEQMKQSNGGVKPDEI 702
Query: 294 -----------------AQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
A VF+ +QF+ I P + +LI AY A Q A+ F+ M
Sbjct: 703 LYNCLIDACVRFHDVNRAVAVFQEMQFSNIKPSSVTYGILIKAYGSANQLDNAFFVFKKM 762
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKR 392
+ L P+ ++ AC K NQ+ RA+E ++RDG + TL F +
Sbjct: 763 KDNCLIPNSVTYGCLIDACVKNNQIERAMEVFETMKRDGVQLNTIIFTTLIKGFAK 818
Score = 58.9 bits (141), Expect = 4e-06, Method: Composition-based stats.
Identities = 50/243 (20%), Positives = 110/243 (45%), Gaps = 6/243 (2%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I K QI+ A MKR G + + T ++ ++K+ L A E ++ +K
Sbjct: 774 YGCLIDACVKNNQIERAMEVFETMKRDGVQLNTIIFTTLIKGFAKSFKLDQALEVYQIMK 833
Query: 233 LLGE-PLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV--YKALLRGYSMNG 289
+ + + ++ S++ +R + + + EM + ++ Y +++G+
Sbjct: 834 MDDKIKPNNVTFNSLIDCCIRCNSIKKAMEIFEEMKQPISHTKPDLITYSTMIKGFCREK 893
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
N + A + ++ I D + L++ A + + A ++NM ++PS+ +
Sbjct: 894 NIQQALIMLNDMEKNNIMADEVLYNSLLDGCCKANEIEMALKVYKNMEILKIKPSNVTYS 953
Query: 350 LILSACEKENQLNRALEFLIDLERDGFMVGKEA-SCTLAAWFK--RLGVVEEVEHVLREY 406
+++ K+ L +AL L ++++DG G +C L K +L E++ H +R
Sbjct: 954 ILIKIYGKQRNLPKALGVLEEMKKDGIRPGLIVYTCLLQTCIKSRQLKTAEQLFHDMRIQ 1013
Query: 407 GLR 409
G+R
Sbjct: 1014 GIR 1016
Score = 50.8 bits (120), Expect = 0.001, Method: Composition-based stats.
Identities = 40/173 (23%), Positives = 75/173 (43%), Gaps = 4/173 (2%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D +T + M+ Y +A L A +K G D+ Y S++ + + + +L
Sbjct: 365 DMMTFSCMIKGYCRAQRLPQALNVLSIMKERGIKPDEVLYNSIIDGCSKNNQIAKAFLLY 424
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
EM + V + + +L+ +GN + A RV E ++ + PD + L +
Sbjct: 425 DEMLGEGVTPTTITFNSLIDCCVRSGNQDQAWRVLEQMKEKQVKPDNYTYSTLFKGIKSE 484
Query: 324 GQSQ---KAYTAFQNMRKAG-LEPSDKCVALILSACEKENQLNRALEFLIDLE 372
Q Q KA+ + ++ + P + ++L AC QL+RA+E L+
Sbjct: 485 NQRQDLEKAFVLYNQLQNSNDFTPDEILFNVLLDACINCKQLDRAVELFKQLK 537
Score = 49.3 bits (116), Expect = 0.004, Method: Composition-based stats.
Identities = 41/207 (19%), Positives = 89/207 (42%), Gaps = 3/207 (1%)
Query: 170 IRDYTKIIHGYGKKMQIQNAENTLLAMKRR--GFICDQVTLTVMVVMYSKAGNLKMAEET 227
IR + +G M ++ A L MK+ G D++ ++ + ++ A
Sbjct: 664 IRAENQSQNGISNPMDLEKAFALLEQMKQSNGGVKPDEILYNCLIDACVRFHDVNRAVAV 723
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
F+E++ +YG ++ AY A LD + ++M + S Y L+
Sbjct: 724 FQEMQFSNIKPSSVTYGILIKAYGSANQLDNAFFVFKKMKDNCLIPNSVTYGCLIDACVK 783
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR-KAGLEPSDK 346
N E A VFE ++ G+ + + LI + + + +A +Q M+ ++P++
Sbjct: 784 NNQIERAMEVFETMKRDGVQLNTIIFTTLIKGFAKSFKLDQALEVYQIMKMDDKIKPNNV 843
Query: 347 CVALILSACEKENQLNRALEFLIDLER 373
++ C + N + +A+E ++++
Sbjct: 844 TFNSLIDCCIRCNSIKKAMEIFEEMKQ 870
Score = 47.8 bits (112), Expect = 0.010, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 79/171 (46%), Gaps = 8/171 (4%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
++ +I GY + ++ A N L MK RG D+V ++ SK + A ++E
Sbjct: 369 FSCMIKGYCRAQRLPQALNVLSIMKERGIKPDEVLYNSIIDGCSKNNQIAKAFLLYDE-- 426
Query: 233 LLGEPLDKR--SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
+LGE + ++ S++ VR+G D+ +L +M ++V + Y L +G
Sbjct: 427 MLGEGVTPTTITFNSLIDCCVRSGNQDQAWRVLEQMKEKQVKPDNYTYSTLFKGIKSENQ 486
Query: 291 SEGAQRVF---EAIQFAG-ITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
+ ++ F +Q + TPD + +L++A Q +A F+ ++
Sbjct: 487 RQDLEKAFVLYNQLQNSNDFTPDEILFNVLLDACINCKQLDRAVELFKQLK 537
Score = 47.0 bits (110), Expect = 0.018, Method: Composition-based stats.
Identities = 51/250 (20%), Positives = 105/250 (42%), Gaps = 14/250 (5%)
Query: 130 FMKPRRADWLAVLKQLKLMEHPLYLQVAELALLE-ESFEANIRDYTKIIHGYGKKMQIQN 188
FM+P + ++K E L L L++ + + N Y +I + ++ +
Sbjct: 579 FMRPDEISFNTIIKGCA-QEKKLQLAFEMFNLMKMQCLKPNDVTYNSLIDACVRCNRLNS 637
Query: 189 AENTLLAMKRRGFICDQVTLTVMVVMY----------SKAGNLKMAEETFEEIKLL--GE 236
A L M++ + D T + ++ S +L+ A E++K G
Sbjct: 638 AWQLLSEMQQNNIVPDNFTYSTLIKGIRAENQSQNGISNPMDLEKAFALLEQMKQSNGGV 697
Query: 237 PLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQR 296
D+ Y ++ A VR ++R + +EM + S Y L++ Y + A
Sbjct: 698 KPDEILYNCLIDACVRFHDVNRAVAVFQEMQFSNIKPSSVTYGILIKAYGSANQLDNAFF 757
Query: 297 VFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACE 356
VF+ ++ + P++ LI+A Q ++A F+ M++ G++ + ++
Sbjct: 758 VFKKMKDNCLIPNSVTYGCLIDACVKNNQIERAMEVFETMKRDGVQLNTIIFTTLIKGFA 817
Query: 357 KENQLNRALE 366
K +L++ALE
Sbjct: 818 KSFKLDQALE 827
Score = 42.4 bits (98), Expect = 0.48, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 55/110 (50%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I YGK+ + A L MK+ G + T ++ K+ LK AE+ F +++
Sbjct: 952 YSILIKIYGKQRNLPKALGVLEEMKKDGIRPGLIVYTCLLQTCIKSRQLKTAEQLFHDMR 1011
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
+ G D+ +Y +M+ + + D +LL++ +V + E+ + +L
Sbjct: 1012 IQGIRGDQLTYQTMINGCLYSQKFDSILILLKDASDSKVQLPHELSQNIL 1061
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 91/219 (41%), Gaps = 35/219 (15%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + +I ++ +I Y + A M+ G D VT T ++ + G
Sbjct: 389 MLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGK 448
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLRE--------------- 265
+ A E F ++ G DK +Y ++ + G L + + L+ E
Sbjct: 449 MDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSS 508
Query: 266 -----------MDAQEVY-----VGSE----VYKALLRGYSMNGNSEGAQRVFEAIQFAG 305
MDAQ ++ VG VY L+ GY + G E A RVF+A+ AG
Sbjct: 509 IINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG 568
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
I P+ + L+N Y G+ + + F+ M + G++PS
Sbjct: 569 IEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPS 607
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 146/347 (42%), Gaps = 45/347 (12%)
Query: 11 RSYSAYQVFDEIT---APKPGLRLSWRNLSLHRKPAKWSRSLRSGPALEAIKAEDMGKTQ 67
R A+ + DE+ P G L+ +L R P+ S + SGPAL A+ + ++
Sbjct: 48 RPEDAHDLLDELQRRGTPVLGRDLNGFLAALARAPS--SAACGSGPAL-AVALFNRAASR 104
Query: 68 VKDDTSMFTWIQIGPNITEEQKQAISQFPRKMTKRCK-----AFVKQIICVSPETGNLSD 122
+ GP + + T+ + AF Q++ TG D
Sbjct: 105 AQ-----------GPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLL----RTGLRVD 149
Query: 123 LLAA---WVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHG 179
++ A F + +R D + L ++ H + EL + + F +I K +
Sbjct: 150 IIIANHLLKGFCEAKRTD-----EALDILLH----RTPELGCVPDVFSYSI--LLKSLCD 198
Query: 180 YGKKMQIQNAENTLLAMKRRGFIC--DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEP 237
GK Q A++ L M G +C D V T ++ + K G++ A + F+E+ G P
Sbjct: 199 QGKSGQ---ADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIP 255
Query: 238 LDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRV 297
D +Y S+V A +A + + E LR+M + V + Y L+ GYS G + A RV
Sbjct: 256 PDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRV 315
Query: 298 FEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
F+ ++ I PD +L+ + G+ ++A F M G P
Sbjct: 316 FKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPD 362
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 87/206 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ ++ Y+ ++H K + AE L M +G + D T ++ YS G
Sbjct: 249 MVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQ 308
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
K A F+E++ D + ++ + + G + + M + YK
Sbjct: 309 WKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKI 368
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+L GY+ G +F+ + GI PD ++LI AY G KA F MR G
Sbjct: 369 MLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHG 428
Query: 341 LEPSDKCVALILSACEKENQLNRALE 366
++P +++A + +++ A+E
Sbjct: 429 VKPDVVTYTTVIAALCRIGKMDDAME 454
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 82/197 (41%), Gaps = 8/197 (4%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G+ + A+ +L + G D V + ++ K G + A+ F+
Sbjct: 471 YHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTV 530
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE----VYKALLRGYSMN 288
+G+ D Y ++ Y G +++ LR DA V G E VY L+ GY
Sbjct: 531 NVGQHPDAVVYSMLMDGYCLVGKMEKA---LRVFDAM-VSAGIEPNVVVYGTLVNGYCKI 586
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + +F + GI P + ++I+ +AG++ A F M ++G+ +
Sbjct: 587 GRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTY 646
Query: 349 ALILSACEKENQLNRAL 365
++L K + A+
Sbjct: 647 NIVLRGFFKNRCFDEAI 663
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 71/159 (44%), Gaps = 2/159 (1%)
Query: 150 HPLYLQVAELAL--LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVT 207
H L+ EL L + +I ++ II+ K +I +A+N G D V
Sbjct: 481 HGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVV 540
Query: 208 LTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMD 267
++++ Y G ++ A F+ + G + YG++V Y + G +D G L REM
Sbjct: 541 YSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREML 600
Query: 268 AQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGI 306
+ + + +Y ++ G + G + A+ F + +GI
Sbjct: 601 QKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGI 639
>gi|6723418|emb|CAB66911.1| putative protein [Arabidopsis thaliana]
Length = 1184
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 93/197 (47%), Gaps = 2/197 (1%)
Query: 208 LTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMD 267
V++ ++ A +K A E +E+ G D+ +G ++ A + G + + +M
Sbjct: 170 FVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDM- 228
Query: 268 AQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQ 327
++ + +LL G+ G A+ V ++ AG+ PD + L++ Y AG+
Sbjct: 229 REKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMA 288
Query: 328 KAYTAFQNMRKAGLEPSDKCVALILSA-CEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
AY +MRK G EP+ C +++ A C E +++ A+ +++ER G L
Sbjct: 289 DAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTAL 348
Query: 387 AAWFKRLGVVEEVEHVL 403
+ F + G++++ VL
Sbjct: 349 ISGFCKWGMIDKGYSVL 365
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 87/214 (40%), Gaps = 34/214 (15%)
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL 221
+ E F N+R +T +++G+ ++ ++ A+ L+ MK G D V T ++ Y+ AG +
Sbjct: 228 MREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKM 287
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
A + +++ G + Y ++ A R + MD
Sbjct: 288 ADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTE---------KRMDE------------- 325
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
A RVF ++ G D LI+ + G K Y+ +MRK G+
Sbjct: 326 ------------AMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGV 373
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
PS I+ A EK+ Q LE + ++R G
Sbjct: 374 MPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRG 407
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 57/123 (46%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
EA+I YT +I G+ K I + L M+++G + QVT ++V + K + E
Sbjct: 339 EADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLE 398
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
E++K G D Y ++ + G + L EM+A + G + + ++ G++
Sbjct: 399 LIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFT 458
Query: 287 MNG 289
G
Sbjct: 459 SQG 461
>gi|359492783|ref|XP_002278486.2| PREDICTED: pentatricopeptide repeat-containing protein At3g21470
[Vitis vinifera]
Length = 575
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 114/257 (44%), Gaps = 14/257 (5%)
Query: 153 YLQVAELALLEESFEA----NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTL 208
Y + AE+ E FE N ++ +I GY KK ++ A + + R V
Sbjct: 234 YARNAEMEAAREVFEGMPQRNFFAWSSMISGYCKKGNVKEARSIFDRIPVRNL----VNW 289
Query: 209 TVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
++ Y++ G + A E F +++ G D+ + S++ A + G+LD G+ + M+
Sbjct: 290 NSLISGYAQNGFSEEALEAFGKMQAEGFEPDEVTIASVLSACSQLGLLDAGKKIHHMMNH 349
Query: 269 QEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC-ALLINAYQMAGQSQ 327
+ + + V L+ Y+ G+ A+ +FE G+ R C +I+ + + GQS+
Sbjct: 350 KGIKLNQFVLNGLVDMYAKCGDLANARLIFE-----GMAHRNRACWNSMISGFAIHGQSK 404
Query: 328 KAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLA 387
+A F M + P + +LSAC +N LE +E+ G G + L
Sbjct: 405 EALEFFGRMEDSHEGPDEITFLSVLSACAHGGFVNAGLEIFSRMEKYGLTTGIKHYGCLI 464
Query: 388 AWFKRLGVVEEVEHVLR 404
R G ++E +++
Sbjct: 465 DLLGRAGRIKEAYDLIK 481
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 71/152 (46%), Gaps = 10/152 (6%)
Query: 206 VTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLRE 265
VT M+ ++++G+ + A F+++ E + ++ MV Y R ++ +
Sbjct: 192 VTWIEMIDGFARSGDTETARRFFDDVP--SELRNVVTWTVMVDGYARNAEMEAAREVFEG 249
Query: 266 MDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQ 325
M + + + +++ GY GN + A+ +F+ I + LI+ Y G
Sbjct: 250 MPQRNFFA----WSSMISGYCKKGNVKEARSIFDRIPVRNLVN----WNSLISGYAQNGF 301
Query: 326 SQKAYTAFQNMRKAGLEPSDKCVALILSACEK 357
S++A AF M+ G EP + +A +LSAC +
Sbjct: 302 SEEALEAFGKMQAEGFEPDEVTIASVLSACSQ 333
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 64/160 (40%), Gaps = 7/160 (4%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M +G +Q L +V MY+K G+L A FE + ++ + SM+ + G
Sbjct: 347 MNHKGIKLNQFVLNGLVDMYAKCGDLANARLIFEGMA----HRNRACWNSMISGFAIHGQ 402
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
M+ + ++L + G +F ++ G+T +
Sbjct: 403 SKEALEFFGRMEDSHEGPDEITFLSVLSACAHGGFVNAGLEIFSRMEKYGLTTGIKHYGC 462
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
LI+ AG+ ++AY + M ++P+D +L AC
Sbjct: 463 LIDLLGRAGRIKEAYDLIKRMP---VKPNDVVWGALLGAC 499
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 96/215 (44%), Gaps = 16/215 (7%)
Query: 130 FMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNA 189
FM+ R D ++K+++ E ++ ++ NI +I+GY + + A
Sbjct: 367 FMEGRMGDADNMIKEMR-----------EKGMMPDAVTHNI-----LINGYCRCGDAKRA 410
Query: 190 ENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMA 249
L M +G VT T ++ + K +K A+ F +I+ G D + +++
Sbjct: 411 FGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDG 470
Query: 250 YVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPD 309
+ G +DR LL+EMD +V Y L++GY G E A+++ + ++ GI PD
Sbjct: 471 HCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPD 530
Query: 310 ARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
LI+ Y G + A+ M G +P+
Sbjct: 531 HISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPT 565
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 83/189 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I+ GK+ +++ A+ +++ G + D + ++ + GN+ A + +E+
Sbjct: 429 YTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMD 488
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ D+ +Y +++ Y R G ++ LL EM + + Y L+ GYS G+ +
Sbjct: 489 NMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMK 548
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A RV + + G P LI + + A + M G+ P D I+
Sbjct: 549 DAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSII 608
Query: 353 SACEKENQL 361
A E + L
Sbjct: 609 EAMETVDDL 617
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 109/254 (42%), Gaps = 5/254 (1%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + A++ Y IH + ++ +A+N + M+ +G + D VT +++ Y + G+
Sbjct: 347 MISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGD 406
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
K A +E+ G +Y S++ + + + L ++ + + V+ A
Sbjct: 407 AKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNA 466
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G+ NGN + A ++ + + + PD L+ Y G+ ++A M++ G
Sbjct: 467 LIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRG 526
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
++P ++S K + A ++ GF T A + L +E E
Sbjct: 527 IKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGF---DPTILTYNALIQGLCKNQEGE 583
Query: 401 HVLREYGLRETYSK 414
H E L+E SK
Sbjct: 584 HA--EELLKEMVSK 595
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 98/245 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+LE N Y +I GY K + A M +G + VT + + G
Sbjct: 312 MLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGR 371
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A+ +E++ G D ++ ++ Y R G R LL EM + + Y +
Sbjct: 372 MGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTS 431
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ + A +F IQ G+ PD + LI+ + G +A+ + M
Sbjct: 432 LIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMK 491
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+ P + ++ +E ++ A + L +++R G + TL + + + G +++
Sbjct: 492 VLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAF 551
Query: 401 HVLRE 405
V E
Sbjct: 552 RVRDE 556
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 104/245 (42%), Gaps = 4/245 (1%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
++ E + Y I G K+ +++ A + M G + + VT ++ Y G+L
Sbjct: 279 DKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLD 338
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A +E+ G +Y + A G + + +++EM + + + + L+
Sbjct: 339 KAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILI 398
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
GY G+++ A + + + GI P LI + ++A F +++ GL
Sbjct: 399 NGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLL 458
Query: 343 PSDKCV--ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
P D V ALI C N ++RA + L +++ + + TL + R G VEE
Sbjct: 459 P-DIIVFNALIDGHCANGN-IDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEAR 516
Query: 401 HVLRE 405
+L E
Sbjct: 517 QLLDE 521
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 88/232 (37%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E+ F NI +++ + K + Q A M R T +M+ + K G LK
Sbjct: 174 EKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLK 233
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A+E ++ LG + +Y +++ + G R V+ + M + + Y + +
Sbjct: 234 KAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFI 293
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G G E A + + G+ P+A LI+ Y G KAY M G+
Sbjct: 294 SGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIM 353
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
S L + A E ++ A + ++ G M L + R G
Sbjct: 354 ASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCG 405
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 95/234 (40%), Gaps = 10/234 (4%)
Query: 160 ALLEESFEANIRD----YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
L E F NIR + +I+ K+ +++ A+ + M+ G + VT ++ +
Sbjct: 202 VLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGH 261
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
G + A F+ +K G D +Y S + + G L+ L+ +M + +
Sbjct: 262 CLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNA 321
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
Y AL+ GY G+ + A + + GI L I+A M G+ A +
Sbjct: 322 VTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKE 381
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAW 389
MR+ G+ P ++++ + RA L + MVGK TL +
Sbjct: 382 MREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDE------MVGKGIQPTLVTY 429
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 57/121 (47%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ GY ++ +++ A L MKRRG D ++ ++ YSK G++K A +E+
Sbjct: 499 YNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMM 558
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G +Y +++ + + E LL+EM ++ + Y +++ + E
Sbjct: 559 TTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAMETVDDLE 618
Query: 293 G 293
G
Sbjct: 619 G 619
>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 96/233 (41%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y I+ GK M+I++ M +G+ VT ++ K+ L A + ++
Sbjct: 804 YHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLM 863
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G +YG ++ ++ G ++ E L EM +Y LL GY + G++E
Sbjct: 864 SEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTE 923
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
+FE++ G+ PD + ++I+ G+ + F+ + GLEP L++
Sbjct: 924 KVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLI 983
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
K +L AL D+E+ G +L + + G E + E
Sbjct: 984 HGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEE 1036
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 104/232 (44%), Gaps = 2/232 (0%)
Query: 147 LMEHPLYLQVAELALLEESFEANIR--DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICD 204
L +H L EL E+ +++ Y +I G + I AE MKR G D
Sbjct: 741 LCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPD 800
Query: 205 QVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLR 264
+ T +++ K+ ++ + EE+ G +Y +++ V++ MLD L
Sbjct: 801 EFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYY 860
Query: 265 EMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAG 324
++ ++ Y LL G +GN E A+ +F+ + G P+ + +L+N Y++AG
Sbjct: 861 QLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAG 920
Query: 325 QSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
++K F++M + G+ P K +++ + +LN L + L G
Sbjct: 921 DTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGL 972
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 126/305 (41%), Gaps = 19/305 (6%)
Query: 109 QIICVSPETGNLSDLLAAWVRF----MKPRRADWLAVLKQLKLMEHPLYLQVAEL--ALL 162
QI+C + G L+D + + KP R ++ +L K + V+E+ AL
Sbjct: 284 QILC---DAGRLADAKDVFWKMKASDQKPDRVTYITLLD--KCGDSGDSRSVSEIWNALK 338
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+ + N+ YT + + ++ A + MK++G I Q + ++ + KA
Sbjct: 339 ADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFN 398
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG----MLDRGEVLLREMDAQEVYVGSEVY 278
A E F + + G + ++ + + ++G L R E++ + +V G+
Sbjct: 399 RALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGN--- 455
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
A+L G + G A+RVF ++ GI+PD ++I A + +A F M +
Sbjct: 456 -AVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIE 514
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
P + ++ K + N A + +L+ TL A R G V+E
Sbjct: 515 NRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKE 574
Query: 399 VEHVL 403
V +L
Sbjct: 575 VMQLL 579
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 93/243 (38%), Gaps = 35/243 (14%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ YT I G+ +++ A L M+ G D VT TV++ + AG L A++ F
Sbjct: 240 NVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVF 299
Query: 229 EEIKL----------------LGEPLDKRS------------YGSMVMAYVRA------- 253
++K G+ D RS Y V++Y A
Sbjct: 300 WKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQV 359
Query: 254 GMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
G +D + EM + + Y +L+ G+ A +F + G TP+
Sbjct: 360 GRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTH 419
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
L IN + +G+S KA ++ M+ G+ P +L K +L A +L+
Sbjct: 420 VLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKA 479
Query: 374 DGF 376
G
Sbjct: 480 MGI 482
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 95/235 (40%), Gaps = 3/235 (1%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
+++G K ++ A+ +K G D +T T+M+ SKA N A + F E+
Sbjct: 457 VLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENR 516
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
D + S++ +AG + + E+ + Y LL G G +
Sbjct: 517 CAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVM 576
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
++ E + P+ +++ G+ A +M G P ++
Sbjct: 577 QLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGL 636
Query: 356 EKENQLNRALEFLIDLERDGFMVGKEAS-CTLAAWFKRLGVVEEVEHVLREYGLR 409
KE++L+ A +++ + A+ CT+ F R G+++E H +REY L+
Sbjct: 637 VKEDRLDEAFWMFCQMKK--VLAPDYATVCTILPSFVRSGLMKEALHTVREYILQ 689
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/216 (19%), Positives = 89/216 (41%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
A+ + +R Y+ ++ +GK+ + L M+ RG + + T+ + + +AG
Sbjct: 196 AMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAG 255
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
L+ A +++ G D + ++ AG L + + +M A + Y
Sbjct: 256 RLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYI 315
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
LL +G+S ++ A++ G + ++A G+ +A F M++
Sbjct: 316 TLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQK 375
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
G+ P ++S K ++ NRALE + G
Sbjct: 376 GIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHG 411
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 93/240 (38%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
+AN+ + + G + +++A L MK G + + T ++ K+G + A
Sbjct: 132 IKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAM 191
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+ ++ + G R+Y +++A+ + + LL EM+A+ V Y +R
Sbjct: 192 DVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVL 251
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
G E A R+ ++ G PD +LI AG+ A F M+ + +P
Sbjct: 252 GQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDR 311
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+L C E L+ DG+ + ++G V+E V E
Sbjct: 312 VTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDE 371
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 74/158 (46%), Gaps = 2/158 (1%)
Query: 155 QVAEL--ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMV 212
+V EL +++E+ +I+ YT +I ++ + + + G D +T +++
Sbjct: 924 KVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLI 983
Query: 213 VMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY 272
K+G L+ A + +++ G + +Y S+++ +AG + E+ A+
Sbjct: 984 HGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWK 1043
Query: 273 VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDA 310
Y AL+RGYS++G+ E A + + G P++
Sbjct: 1044 PNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNS 1081
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 75/184 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L+ E F Y ++ G K I++AE M G + +++ Y AG+
Sbjct: 862 LMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGD 921
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ E FE + G D +SY ++ G L+ G +++ + Y
Sbjct: 922 TEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNL 981
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G +G E A ++ ++ GI P+ LI AG++ +A ++ + G
Sbjct: 982 LIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKG 1041
Query: 341 LEPS 344
+P+
Sbjct: 1042 WKPN 1045
>gi|356528278|ref|XP_003532731.1| PREDICTED: pentatricopeptide repeat-containing protein At5g27270-like
[Glycine max]
Length = 1079
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 96/237 (40%)
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL 221
LEE+ E + Y I + ++ A + M G T M+ +Y + L
Sbjct: 779 LEENLELDTVAYNTFIKAMLEAGKLHFASSIFEHMISSGVAPSIETFNTMISVYGQDQKL 838
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
A E F + PLD+++Y +++ Y +AG++ L +M + G Y +
Sbjct: 839 DRAVEMFNQASSCSVPLDEKTYMNLIGYYGKAGLMLEASQLFSKMQEGGIKPGKVSYNIM 898
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+ Y+ G +++F +Q G PD+ L+ AY + KA M+ G+
Sbjct: 899 INVYANAGVLHETEKLFHTMQRQGYLPDSFTYLSLVQAYTRSLNYSKAEETIHAMQSKGI 958
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
PS ++L A K ++ A DL G + T+ + + G VEE
Sbjct: 959 PPSCVHFNILLHAFIKAGLIHEAKRVYEDLSTFGLVPDLVCHRTMLNGYLKCGYVEE 1015
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 85/200 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I + +I YG+ ++ A D+ T ++ Y KAG + A + F
Sbjct: 821 SIETFNTMISVYGQDQKLDRAVEMFNQASSCSVPLDEKTYMNLIGYYGKAGLMLEASQLF 880
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+++ G K SY M+ Y AG+L E L M Q S Y +L++ Y+ +
Sbjct: 881 SKMQEGGIKPGKVSYNIMINVYANAGVLHETEKLFHTMQRQGYLPDSFTYLSLVQAYTRS 940
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
N A+ A+Q GI P +L++A+ AG +A ++++ GL P C
Sbjct: 941 LNYSKAEETIHAMQSKGIPPSCVHFNILLHAFIKAGLIHEAKRVYEDLSTFGLVPDLVCH 1000
Query: 349 ALILSACEKENQLNRALEFL 368
+L+ K + + F
Sbjct: 1001 RTMLNGYLKCGYVEEGINFF 1020
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 107/245 (43%), Gaps = 2/245 (0%)
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL 221
L+ S+ ++ YT ++ YG+ +++ AE L M G D+V M+ Y++ G
Sbjct: 188 LQLSYRPSVIVYTIVLRLYGQVGKLKLAEEIFLEMLDVGCEPDEVACGTMLCSYARWGRH 247
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEV-LLREMDAQEVYVGSEVYKA 280
K + IK G L + M M+ ++ L R V + ++M + V + Y
Sbjct: 248 KAMLSFYSAIKERGIILSVAVFNFM-MSSLQKKSLHREVVHVWKDMLGKGVIPNNFTYTV 306
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+ + G E A + F+ ++ G+ P+ +LLIN +G + +++MR G
Sbjct: 307 AISSFVKEGLHEDAFKTFDEMRNYGVVPEELTYSLLINLNAKSGNRDEVQRLYEDMRFRG 366
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+ PS+ A +LS K RAL ++ R+ + L + +LG+ E+
Sbjct: 367 IIPSNYTCASLLSLYYKYEDYPRALSLFSEMVRNKISTDEVIYGLLIRIYGKLGLYEDAH 426
Query: 401 HVLRE 405
E
Sbjct: 427 KTFEE 431
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 74/166 (44%)
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
+ Y +I YGK + A M+ G +V+ +M+ +Y+ AG L E+ F
Sbjct: 858 KTYMNLIGYYGKAGLMLEASQLFSKMQEGGIKPGKVSYNIMINVYANAGVLHETEKLFHT 917
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
++ G D +Y S+V AY R+ + E + M ++ + + LL + G
Sbjct: 918 MQRQGYLPDSFTYLSLVQAYTRSLNYSKAEETIHAMQSKGIPPSCVHFNILLHAFIKAGL 977
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
A+RV+E + G+ PD ++N Y G ++ F+++
Sbjct: 978 IHEAKRVYEDLSTFGLVPDLVCHRTMLNGYLKCGYVEEGINFFESI 1023
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 86/225 (38%), Gaps = 3/225 (1%)
Query: 187 QNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSM 246
Q AEN + D V + +AG L A FE + G ++ +M
Sbjct: 769 QEAENIVQRSLEENLELDTVAYNTFIKAMLEAGKLHFASSIFEHMISSGVAPSIETFNTM 828
Query: 247 VMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGI 306
+ Y + LDR + + + V + + Y L+ Y G A ++F +Q GI
Sbjct: 829 ISVYGQDQKLDRAVEMFNQASSCSVPLDEKTYMNLIGYYGKAGLMLEASQLFSKMQEGGI 888
Query: 307 TPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALE 366
P ++IN Y AG + F M++ G P ++ A + ++A E
Sbjct: 889 KPGKVSYNIMINVYANAGVLHETEKLFHTMQRQGYLPDSFTYLSLVQAYTRSLNYSKAEE 948
Query: 367 FLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV---LREYGL 408
+ ++ G L F + G++ E + V L +GL
Sbjct: 949 TIHAMQSKGIPPSCVHFNILLHAFIKAGLIHEAKRVYEDLSTFGL 993
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 100/231 (43%), Gaps = 3/231 (1%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKL 233
+++I K+ +I AE + + G D+ T+ ++ Y K LK AE+ F E
Sbjct: 652 SQLIINLSKEGEISKAELLNHQLTKLGCRMDEATVASLISHYGKQQMLKQAEDIFAE--Y 709
Query: 234 LGEPLDKRS-YGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ P + Y SM+ AY + G ++ +L ++ + +G+ + + G +
Sbjct: 710 INSPTSSKVLYNSMINAYAKCGKQEKAYLLYKQATGEGRDLGAVGISIAVNSLTNGGKHQ 769
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ + + + D I A AG+ A + F++M +G+ PS + ++
Sbjct: 770 EAENIVQRSLEENLELDTVAYNTFIKAMLEAGKLHFASSIFEHMISSGVAPSIETFNTMI 829
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
S ++ +L+RA+E + ++ L ++ + G++ E +
Sbjct: 830 SVYGQDQKLDRAVEMFNQASSCSVPLDEKTYMNLIGYYGKAGLMLEASQLF 880
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 65/134 (48%), Gaps = 1/134 (0%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M R D+V +++ +Y K G + A +TFEE K G+ +++Y +M ++ +G
Sbjct: 397 MVRNKISTDEVIYGLLIRIYGKLGLYEDAHKTFEETKNRGQLTSEKTYLAMAQVHLTSGN 456
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
+D+ ++ M + ++ Y LL+ Y M + A+ F A+ G PDA C
Sbjct: 457 VDKALEVIELMKSSNLWFSRFAYIVLLQCYVMKEDVASAEGTFLALSKTG-PPDAGSCND 515
Query: 316 LINAYQMAGQSQKA 329
+++ Y + KA
Sbjct: 516 MLSLYMGLNLTNKA 529
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 73/169 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT I + K+ ++A T M+ G + +++T ++++ + +K+GN + +E+++
Sbjct: 304 YTVAISSFVKEGLHEDAFKTFDEMRNYGVVPEELTYSLLINLNAKSGNRDEVQRLYEDMR 363
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + S++ Y + R L EM ++ +Y L+R Y G E
Sbjct: 364 FRGIIPSNYTCASLLSLYYKYEDYPRALSLFSEMVRNKISTDEVIYGLLIRIYGKLGLYE 423
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
A + FE + G + + + +G KA + M+ + L
Sbjct: 424 DAHKTFEETKNRGQLTSEKTYLAMAQVHLTSGNVDKALEVIELMKSSNL 472
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 84/210 (40%), Gaps = 1/210 (0%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M+ RG I T ++ +Y K + A F E+ D+ YG ++ Y + G+
Sbjct: 362 MRFRGIIPSNYTCASLLSLYYKYEDYPRALSLFSEMVRNKISTDEVIYGLLIRIYGKLGL 421
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
+ E + + Y A+ + + +GN + A V E ++ + + +
Sbjct: 422 YEDAHKTFEETKNRGQLTSEKTYLAMAQVHLTSGNVDKALEVIELMKSSNLWFSRFAYIV 481
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
L+ Y M A F + K G + C + LS N N+A EF++ + +
Sbjct: 482 LLQCYVMKEDVASAEGTFLALSKTGPPDAGSCNDM-LSLYMGLNLTNKAKEFIVQIRENE 540
Query: 376 FMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
KE T+ + + G++ E E + +
Sbjct: 541 TNFDKELYRTVMKVYCKEGMLPEAEQLTNQ 570
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 84/201 (41%), Gaps = 12/201 (5%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M +G I + T TV + + K G + A +TF+E++ G ++ +Y ++ ++G
Sbjct: 292 MLGKGVIPNNFTYTVAISSFVKEGLHEDAFKTFDEMRNYGVVPEELTYSLLINLNAKSGN 351
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
D + L +M + + + +LL Y + A +F + I+ D + L
Sbjct: 352 RDEVQRLYEDMRFRGIIPSNYTCASLLSLYYKYEDYPRALSLFSEMVRNKISTDEVIYGL 411
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
LI Y G + A+ F+ + G S+K + +++ALE +I+L +
Sbjct: 412 LIRIYGKLGLYEDAHKTFEETKNRGQLTSEKTYLAMAQVHLTSGNVDKALE-VIELMKSS 470
Query: 376 FMVGKEASCTLAAWFKRLGVV 396
+ WF R +
Sbjct: 471 NL-----------WFSRFAYI 480
>gi|255558584|ref|XP_002520317.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540536|gb|EEF42103.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 439
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 1/185 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ + + K ++ A+ + K R F+ D T T+++ + K NL A E F
Sbjct: 124 NLAAFNGLFSALCKSKNVRKAQEIFDSSKDR-FVPDSKTYTILLEGWGKTPNLPKAREIF 182
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E+ +G D +YG MV +AG +D +++EMD S +Y L+ Y +
Sbjct: 183 REMVDVGCSPDIVTYGIMVDILCKAGRVDEALDIVKEMDLTICKPTSFIYSVLIHTYGIE 242
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A F ++ G+ D LI A+ + + Y M G++P+ + +
Sbjct: 243 NRIEDAVDTFLGMEKNGVKADVAAYNALIGAFCKVNKFKNVYRVLNEMDYKGMQPNSRTL 302
Query: 349 ALILS 353
+IL+
Sbjct: 303 NIILN 307
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 19/213 (8%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
++ F + + YT ++ G+GK + A M G D VT +MV + KAG +
Sbjct: 152 KDRFVPDSKTYTILLEGWGKTPNLPKAREIFREMVDVGCSPDIVTYGIMVDILCKAGRVD 211
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE------ 276
A + +E+ L Y ++ Y G+ +R E DA + ++G E
Sbjct: 212 EALDIVKEMDLTICKPTSFIYSVLIHTY---GIENRIE------DAVDTFLGMEKNGVKA 262
Query: 277 ---VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAF 333
Y AL+ + + RV + + G+ P++R +++N G++ +A+ F
Sbjct: 263 DVAAYNALIGAFCKVNKFKNVYRVLNEMDYKGMQPNSRTLNIILNNLIARGETDEAFRVF 322
Query: 334 QNMRKAGLEPSDKCVALILSACEKENQLNRALE 366
+ M K +D +I CE+ N+L AL+
Sbjct: 323 RRMIKVCEPDADTYTMMIKMFCER-NELEMALK 354
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 116/259 (44%), Gaps = 7/259 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
+ ++R Y +I K Q Q + + AMKR+ + + T +++ Y++A L+ A
Sbjct: 52 YTHSVRAYHTMIESLAKIRQYQIMWDLINAMKRKRML-NVETFCIIMRKYARAQKLEEAV 110
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYV-GSEVYKALLRG 284
TF ++ P + ++ + A ++ + + + + +++ +V S+ Y LL G
Sbjct: 111 YTFNVMEKYDVPPNLAAFNGLFSALCKSKNVRKAQEIFDS--SKDRFVPDSKTYTILLEG 168
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
+ N A+ +F + G +PD ++++ AG+ +A + M +P+
Sbjct: 169 WGKTPNLPKAREIFREMVDVGCSPDIVTYGIMVDILCKAGRVDEALDIVKEMDLTICKPT 228
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
++++ EN++ A++ + +E++G A L F ++ + V VL
Sbjct: 229 SFIYSVLIHTYGIENRIEDAVDTFLGMEKNGVKADVAAYNALIGAFCKVNKFKNVYRVLN 288
Query: 405 EYGLRETYSKIPGSRSIAL 423
E + P SR++ +
Sbjct: 289 EMDYKGMQ---PNSRTLNI 304
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 81/196 (41%), Gaps = 2/196 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +IH YG + +I++A +T L M++ G D ++ + K K E+
Sbjct: 232 YSVLIHTYGIENRIEDAVDTFLGMEKNGVKADVAAYNALIGAFCKVNKFKNVYRVLNEMD 291
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + R+ ++ + G D + R M + ++ Y +++ + E
Sbjct: 292 YKGMQPNSRTLNIILNNLIARGETDEAFRVFRRM-IKVCEPDADTYTMMIKMFCERNELE 350
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +V++ ++ P ++LIN G A ++M + G+ PS +
Sbjct: 351 MALKVWKYMKKKHFVPSMHTFSVLINGLCEEGDVSHACVMLEDMIEKGIRPSGVTFGRLR 410
Query: 353 SACEKENQLNRALEFL 368
KE + + LEFL
Sbjct: 411 HLLIKEGRED-VLEFL 425
>gi|356540373|ref|XP_003538664.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 881
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 103/220 (46%)
Query: 185 QIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYG 244
++++ +T+ MK++GF + + +V +Y G K A E EEI+ G LD
Sbjct: 204 RLEDTWSTINEMKQKGFPLNSFMYSKVVGIYRDNGMWKKAIEVLEEIRERGISLDTHICN 263
Query: 245 SMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFA 304
S++ + + G LD L ++M + V + +L++ + G+ A +F +Q
Sbjct: 264 SIIDTFGKYGELDEALKLFKKMQKEGVRPNIVTWNSLIKWHCKEGDFMKAFHLFTDMQEQ 323
Query: 305 GITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
G+ PD ++ +I+ G+ F++M+ G + A+++ + + A
Sbjct: 324 GLYPDPKIFVTIISCLGEQGKWDIIKKYFESMKIRGNKEYGAVYAVLVDIYGQYGKFQNA 383
Query: 365 LEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
E + L+ +G +V C LA + + G+ E+V VL+
Sbjct: 384 GECVQALKSEGVLVSPSIFCVLANAYAQQGLCEQVIMVLQ 423
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/213 (19%), Positives = 91/213 (42%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+E NI + +I + K+ A + M+ +G D ++ + G
Sbjct: 287 KEGVRPNIVTWNSLIKWHCKEGDFMKAFHLFTDMQEQGLYPDPKIFVTIISCLGEQGKWD 346
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
+ ++ FE +K+ G Y +V Y + G ++ + ++ V V ++ L
Sbjct: 347 IIKKYFESMKIRGNKEYGAVYAVLVDIYGQYGKFQNAGECVQALKSEGVLVSPSIFCVLA 406
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
Y+ G E V + ++ GI P+ M +LINA+ AG+ +A + + +++++G+
Sbjct: 407 NAYAQQGLCEQVIMVLQIMEAEGIEPNIVMLNMLINAFGNAGRYMEAISVYHHIKESGVS 466
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDG 375
P ++ A + + + ++E DG
Sbjct: 467 PDVVTYTTLMKAFIRAKKFDEVPIIYKEMENDG 499
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 84/189 (44%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
++ + Y ++ G+ KK + A L M G + T + + Y AG L+
Sbjct: 150 YKPKLNLYHSLLRGFLKKGLLGLANGVLKEMDDLGIWRSKETYQIFLDYYVGAGRLEDTW 209
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
T E+K G PL+ Y +V Y GM + +L E+ + + + + + +++ +
Sbjct: 210 STINEMKQKGFPLNSFMYSKVVGIYRDNGMWKKAIEVLEEIRERGISLDTHICNSIIDTF 269
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
G + A ++F+ +Q G+ P+ LI + G KA+ F +M++ GL P
Sbjct: 270 GKYGELDEALKLFKKMQKEGVRPNIVTWNSLIKWHCKEGDFMKAFHLFTDMQEQGLYPDP 329
Query: 346 KCVALILSA 354
K I+S
Sbjct: 330 KIFVTIISC 338
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/224 (19%), Positives = 91/224 (40%)
Query: 182 KKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKR 241
K+ + A + L M+ +GF + ++ G A+ F+E+ G
Sbjct: 96 KEGDLDRAMSLLSQMEAKGFHLSSTSYACLIEALGNVGRTSEADMLFKEMVCYGYKPKLN 155
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI 301
Y S++ +++ G+L +L+EMD ++ E Y+ L Y G E +
Sbjct: 156 LYHSLLRGFLKKGLLGLANGVLKEMDDLGIWRSKETYQIFLDYYVGAGRLEDTWSTINEM 215
Query: 302 QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQL 361
+ G ++ M + ++ Y+ G +KA + +R+ G+ I+ K +L
Sbjct: 216 KQKGFPLNSFMYSKVVGIYRDNGMWKKAIEVLEEIRERGISLDTHICNSIIDTFGKYGEL 275
Query: 362 NRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ AL+ ++++G +L W + G + H+ +
Sbjct: 276 DEALKLFKKMQKEGVRPNIVTWNSLIKWHCKEGDFMKAFHLFTD 319
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 90/230 (39%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
II +GK ++ A M++ G + VT ++ + K G+ A F +++ G
Sbjct: 265 IIDTFGKYGELDEALKLFKKMQKEGVRPNIVTWNSLIKWHCKEGDFMKAFHLFTDMQEQG 324
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
D + + +++ G D + M + VY L+ Y G + A
Sbjct: 325 LYPDPKIFVTIISCLGEQGKWDIIKKYFESMKIRGNKEYGAVYAVLVDIYGQYGKFQNAG 384
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
+A++ G+ + +L NAY G ++ Q M G+EP+ + ++++A
Sbjct: 385 ECVQALKSEGVLVSPSIFCVLANAYAQQGLCEQVIMVLQIMEAEGIEPNIVMLNMLINAF 444
Query: 356 EKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ A+ ++ G TL F R +EV + +E
Sbjct: 445 GNAGRYMEAISVYHHIKESGVSPDVVTYTTLMKAFIRAKKFDEVPIIYKE 494
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 83/188 (44%), Gaps = 2/188 (1%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
++ F N Y+K++ Y + A L ++ RG D ++ + K G L
Sbjct: 217 QKGFPLNSFMYSKVVGIYRDNGMWKKAIEVLEEIRERGISLDTHICNSIIDTFGKYGELD 276
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A + F++++ G + ++ S++ + + G + L +M Q +Y +++ ++
Sbjct: 277 EALKLFKKMQKEGVRPNIVTWNSLIKWHCKEGDFMKAFHLFTDMQEQGLYPDPKIFVTII 336
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG-- 340
G + ++ FE+++ G + A+L++ Y G+ Q A Q ++ G
Sbjct: 337 SCLGEQGKWDIIKKYFESMKIRGNKEYGAVYAVLVDIYGQYGKFQNAGECVQALKSEGVL 396
Query: 341 LEPSDKCV 348
+ PS CV
Sbjct: 397 VSPSIFCV 404
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 71/164 (43%), Gaps = 11/164 (6%)
Query: 198 RRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLD 257
+ GF D V ++ Y+ G+L ++++ F E+ D S+ SM+ +Y G
Sbjct: 689 KEGFQEDTVLCNALIHAYAWCGSLALSKQVFNEMGC----RDLVSWNSMLKSYAIHGQTK 744
Query: 258 RGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI-QFAGITPDARMCALL 316
L + M+ V S + LL S G + ++F + G+ P + +
Sbjct: 745 DAVELFQRMN---VCTDSATFVVLLSACSHVGFVDEGVKLFNCMSDDHGVVPQLDHYSCM 801
Query: 317 INAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQ 360
++ Y AG K + A + +RK ++P + +L +C K +
Sbjct: 802 VDLYGGAG---KIFEAEELIRKMPMKPDSVIWSSLLGSCRKHGK 842
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 84/177 (47%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y+ +I+GY K ++++ M +RG + + VT T+++ Y +AG L +AEE F
Sbjct: 325 DVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIF 384
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ G + +Y ++ G +++ V+L +M + Y ++RG
Sbjct: 385 RRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKA 444
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
G A ++ ++ G+ PD ++ G ++A F+ M++ G+ P++
Sbjct: 445 GEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 81/183 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ S + +I Y+ +I+G ++ AE M +G D VT ++++ Y K+
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKK 341
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ + F E+ G + +Y ++ Y RAG L+ E + R M V+ Y
Sbjct: 342 VEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNV 401
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL G NG E A + +Q G+ D ++I AG+ A+ + ++ G
Sbjct: 402 LLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQG 461
Query: 341 LEP 343
L P
Sbjct: 462 LMP 464
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 103/240 (42%), Gaps = 6/240 (2%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMV---VMYSKAGNLKMAE 225
++ + +I K+ ++ AE M RR D VT ++++ MYS+ L AE
Sbjct: 255 DVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSR---LDEAE 311
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
E F + G D +Y ++ Y ++ ++ G L EM + V + Y L++GY
Sbjct: 312 EMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGY 371
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
G A+ +F + F G+ P+ +L++ G+ +KA +M+K G++
Sbjct: 372 CRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADI 431
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+I+ K ++ A + L G M T+ + G+ E + + R+
Sbjct: 432 VTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRK 491
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 86/213 (40%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
++ ++ Y +I G + +A + M +R D T ++ K G +
Sbjct: 214 KDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVS 273
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
AEE +EE+ D +Y ++ LD E + M ++ + Y L+
Sbjct: 274 EAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILI 333
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
GY + E ++F + G+ + +LI Y AG+ A F+ M G+
Sbjct: 334 NGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVH 393
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDG 375
P+ ++L ++ +AL L D++++G
Sbjct: 394 PNIITYNVLLHGLCDNGKIEKALVILADMQKNG 426
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 52/307 (16%), Positives = 117/307 (38%), Gaps = 17/307 (5%)
Query: 115 PETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPL---------YLQVAELAL---- 161
P + S LL+A + K +L Q+ + H L + + ++L+L
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 162 ----LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSK 217
++ E +I + +++G+ + ++ +A M G+ + V ++ K
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 218 AGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
+ + A + ++ G D +Y S++ +G ++ M +E+Y
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
+ AL+ G A+ +E + + PD +LLI M + +A F M
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
G P +++++ K ++ ++ ++ + G + L + R G +
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378
Query: 398 EVEHVLR 404
E + R
Sbjct: 379 VAEEIFR 385
>gi|410110135|gb|AFV61147.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
rotundifolia]
Length = 440
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 103/219 (47%), Gaps = 4/219 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 220 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDR 279
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ + +M++AY RAG++ + LL E+ + + + +L
Sbjct: 280 AAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDTAIHILA 338
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG + + +I+ + F MR G P
Sbjct: 339 G---AGRIEEATYVFRQAIDAGEVKNIAVFERMIHLLSKYKKYANVVEVFDKMRGLGYFP 395
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEA 382
+A++L+A K + ++A + ++++ G + E
Sbjct: 396 DSNVIAVVLNAYGKLQEFDKANDVYMEMQEVGCVFSDEV 434
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 102/237 (43%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 120 NTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 179
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 180 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 239
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G+E
Sbjct: 240 LEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILF 299
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE +V R+
Sbjct: 300 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAG----AGRIEEATYVFRQ 352
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 102/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + MK G + + + + ++ MY + A
Sbjct: 82 FTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEAL 141
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 142 SVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 201
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + ++ Y + +KA Q M+ G+E
Sbjct: 202 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIE 258
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 259 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRL 318
Query: 403 LRE 405
L E
Sbjct: 319 LHE 321
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ A + L M++ D V + ++ + K + A F +K
Sbjct: 19 YSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 78
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +M+ + +A + L+ EM V + Y LL Y N
Sbjct: 79 RSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFL 138
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF ++ D C ++I+ Y G +++A F MRK G+EP+
Sbjct: 139 EALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 190
Score = 41.2 bits (95), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 33/183 (18%), Positives = 82/183 (44%), Gaps = 2/183 (1%)
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
F+E++ D+ +Y +++ + + G+ D L++M+ +V +Y L+
Sbjct: 4 FDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRK 63
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
+ A +F ++ +G TPD +IN + A ++A + M+ AG+ P+
Sbjct: 64 LCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTS 123
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYG 407
+ +L+ + + AL ++ ++ + + +LG+ +E + + +G
Sbjct: 124 YSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF--WG 181
Query: 408 LRE 410
+R+
Sbjct: 182 MRK 184
>gi|359490014|ref|XP_002275213.2| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Vitis vinifera]
Length = 494
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 103/236 (43%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y ++ YG+ ++ + + M R GF D + ++ +Y G K A E
Sbjct: 127 NRATYEALVDYYGRAGRLNDVWAVIGEMSRDGFGPDSFVYSKVIGVYRDNGMWKKAMEIV 186
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
EI+ +G LDKR Y S++ + + G L + +M + V + +L++ +
Sbjct: 187 REIREMGVSLDKRIYNSIIDTFGKCGELSEALEVFEKMQEEGVKPDIMTWNSLIQWHCKA 246
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G+ A +F +Q G+ PD ++ +I+ G+ F+NM+ G + S
Sbjct: 247 GDVGKALELFSKMQEEGLYPDPKIFITIISRLGEQGKWDVIKRNFENMKCRGHQRSGAIY 306
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
A+++ + + E + L+ +G C LA + + G+ E+ VL+
Sbjct: 307 AILVDIYGQYGRFQGPEECISALKSEGIQPSASMFCVLANAYAQQGLCEQTVKVLQ 362
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/213 (19%), Positives = 91/213 (42%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
EE + +I + +I + K + A M+ G D ++ + G
Sbjct: 226 EEGVKPDIMTWNSLIQWHCKAGDVGKALELFSKMQEEGLYPDPKIFITIISRLGEQGKWD 285
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
+ + FE +K G Y +V Y + G E + + ++ + + ++ L
Sbjct: 286 VIKRNFENMKCRGHQRSGAIYAILVDIYGQYGRFQGPEECISALKSEGIQPSASMFCVLA 345
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
Y+ G E +V + ++ GI P+ M +LINA+ +AG+ +A + + +++ G+
Sbjct: 346 NAYAQQGLCEQTVKVLQLMETEGIEPNLIMLNMLINAFGIAGRHLEALSVYHHIKDTGIS 405
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDG 375
P + ++ AC + + ++ E ++E G
Sbjct: 406 PDVVTYSTLMKACIRARKFDKVPEIYEEMESAG 438
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 104/249 (41%)
Query: 148 MEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVT 207
M++ + V E+++ E E + Y I + + A L M+ GF +
Sbjct: 1 MKNKHQVSVEEVSISENGEELSGVVYNARIRESCRVGDVDKAMKLLAQMEALGFSLSLGS 60
Query: 208 LTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMD 267
T ++ G AE F E+ LG LD R Y M+ + +R G+L+ + +L EMD
Sbjct: 61 YTTVIEALGSVGRTLEAEAIFREMVHLGLKLDLRVYNVMLRSCLRKGLLELADKVLAEMD 120
Query: 268 AQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQ 327
A + Y+AL+ Y G V + G PD+ + + +I Y+ G +
Sbjct: 121 ALGIGRNRATYEALVDYYGRAGRLNDVWAVIGEMSRDGFGPDSFVYSKVIGVYRDNGMWK 180
Query: 328 KAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLA 387
KA + +R+ G+ + I+ K +L+ ALE ++ +G +L
Sbjct: 181 KAMEIVREIREMGVSLDKRIYNSIIDTFGKCGELSEALEVFEKMQEEGVKPDIMTWNSLI 240
Query: 388 AWFKRLGVV 396
W + G V
Sbjct: 241 QWHCKAGDV 249
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 78/185 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++R Y ++ +K ++ A+ L M G ++ T +V Y +AG L
Sbjct: 92 DLRVYNVMLRSCLRKGLLELADKVLAEMDALGIGRNRATYEALVDYYGRAGRLNDVWAVI 151
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E+ G D Y ++ Y GM + ++RE+ V + +Y +++ +
Sbjct: 152 GEMSRDGFGPDSFVYSKVIGVYRDNGMWKKAMEIVREIREMGVSLDKRIYNSIIDTFGKC 211
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G A VFE +Q G+ PD LI + AG KA F M++ GL P K
Sbjct: 212 GELSEALEVFEKMQEEGVKPDIMTWNSLIQWHCKAGDVGKALELFSKMQEEGLYPDPKIF 271
Query: 349 ALILS 353
I+S
Sbjct: 272 ITIIS 276
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/204 (19%), Positives = 91/204 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+K+I Y + A + ++ G D+ ++ + K G L A E FE+++
Sbjct: 166 YSKVIGVYRDNGMWKKAMEIVREIREMGVSLDKRIYNSIIDTFGKCGELSEALEVFEKMQ 225
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D ++ S++ + +AG + + L +M + +Y +++ ++ G +
Sbjct: 226 EEGVKPDIMTWNSLIQWHCKAGDVGKALELFSKMQEEGLYPDPKIFITIISRLGEQGKWD 285
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
+R FE ++ G + A+L++ Y G+ Q ++ G++PS ++
Sbjct: 286 VIKRNFENMKCRGHQRSGAIYAILVDIYGQYGRFQGPEECISALKSEGIQPSASMFCVLA 345
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
+A ++ + ++ L +E +G
Sbjct: 346 NAYAQQGLCEQTVKVLQLMETEGI 369
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 79/192 (41%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
EE + + + II G++ + + MK RG ++V +Y + G +
Sbjct: 261 EEGLYPDPKIFITIISRLGEQGKWDVIKRNFENMKCRGHQRSGAIYAILVDIYGQYGRFQ 320
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
EE +K G + + AY + G+ ++ +L+ M+ + + + L+
Sbjct: 321 GPEECISALKSEGIQPSASMFCVLANAYAQQGLCEQTVKVLQLMETEGIEPNLIMLNMLI 380
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
+ + G A V+ I+ GI+PD + L+ A A + K ++ M AG
Sbjct: 381 NAFGIAGRHLEALSVYHHIKDTGISPDVVTYSTLMKACIRARKFDKVPEIYEEMESAGCT 440
Query: 343 PSDKCVALILSA 354
P K ++ +A
Sbjct: 441 PDRKAREMLQTA 452
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 73/187 (39%)
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
+ G++ A + +++ LG L SY +++ A G E + REM + +
Sbjct: 35 RVGDVDKAMKLLAQMEALGFSLSLGSYTTVIEALGSVGRTLEAEAIFREMVHLGLKLDLR 94
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
VY +LR G E A +V + GI + L++ Y AG+ + M
Sbjct: 95 VYNVMLRSCLRKGLLELADKVLAEMDALGIGRNRATYEALVDYYGRAGRLNDVWAVIGEM 154
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVV 396
+ G P + ++ +A+E + ++ G + K ++ F + G +
Sbjct: 155 SRDGFGPDSFVYSKVIGVYRDNGMWKKAMEIVREIREMGVSLDKRIYNSIIDTFGKCGEL 214
Query: 397 EEVEHVL 403
E V
Sbjct: 215 SEALEVF 221
>gi|240255563|ref|NP_190542.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546755|sp|P0C8A0.1|PP275_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49730
gi|332645062|gb|AEE78583.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 93/197 (47%), Gaps = 2/197 (1%)
Query: 208 LTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMD 267
V++ ++ A +K A E +E+ G D+ +G ++ A + G + + +M
Sbjct: 170 FVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDM- 228
Query: 268 AQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQ 327
++ + +LL G+ G A+ V ++ AG+ PD + L++ Y AG+
Sbjct: 229 REKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMA 288
Query: 328 KAYTAFQNMRKAGLEPSDKCVALILSA-CEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
AY +MRK G EP+ C +++ A C E +++ A+ +++ER G L
Sbjct: 289 DAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTAL 348
Query: 387 AAWFKRLGVVEEVEHVL 403
+ F + G++++ VL
Sbjct: 349 ISGFCKWGMIDKGYSVL 365
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 87/214 (40%), Gaps = 34/214 (15%)
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL 221
+ E F N+R +T +++G+ ++ ++ A+ L+ MK G D V T ++ Y+ AG +
Sbjct: 228 MREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKM 287
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
A + +++ G + Y ++ A R + MD
Sbjct: 288 ADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTE---------KRMDE------------- 325
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
A RVF ++ G D LI+ + G K Y+ +MRK G+
Sbjct: 326 ------------AMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGV 373
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
PS I+ A EK+ Q LE + ++R G
Sbjct: 374 MPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRG 407
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 57/123 (46%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
EA+I YT +I G+ K I + L M+++G + QVT ++V + K + E
Sbjct: 339 EADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLE 398
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
E++K G D Y ++ + G + L EM+A + G + + ++ G++
Sbjct: 399 LIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFT 458
Query: 287 MNG 289
G
Sbjct: 459 SQG 461
>gi|215768832|dbj|BAH01061.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 842
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 74/152 (48%), Gaps = 4/152 (2%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D T T +V MY+K G L A++ + + E + ++ S+V Y AG D L+
Sbjct: 326 DVYTGTALVDMYAKCGRLDCAQKVLDAL----EHRNLTTWNSLVAGYANAGRFDIALELV 381
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
M + + L+ GYSMNG S A + I+ AG+TP+ LI+
Sbjct: 382 ELMKKNRLDPDITTWNGLITGYSMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHN 441
Query: 324 GQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
G+ + ++ M+K G++PS ++++L AC
Sbjct: 442 GEYEDSFYFCHEMQKDGVQPSLVTMSVLLRAC 473
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 96/212 (45%), Gaps = 10/212 (4%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E N+ + ++ G + + + A + +M ++G D T++ ++ + G L+ E
Sbjct: 254 EPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGME 313
Query: 227 T---FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
F +L EP D + ++V Y + G LD + +L ++ + + + +L+
Sbjct: 314 IHCFFLRNQL--EP-DVYTGTALVDMYAKCGRLDCAQKVLDALEHRNL----TTWNSLVA 366
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
GY+ G + A + E ++ + PD LI Y M GQS +A + ++ AG+ P
Sbjct: 367 GYANAGRFDIALELVELMKKNRLDPDITTWNGLITGYSMNGQSSQAVLLLRQIKAAGVTP 426
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDG 375
+ ++S + + F ++++DG
Sbjct: 427 NVVSWTSLISGSCHNGEYEDSFYFCHEMQKDG 458
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 52/266 (19%), Positives = 93/266 (34%), Gaps = 40/266 (15%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ + ++ GY + A + MK+ D T ++ YS G A
Sbjct: 357 NLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDITTWNGLITGYSMNGQSSQAVLLL 416
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYV--------------- 273
+IK G + S+ S++ G + EM V
Sbjct: 417 RQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRACAGL 476
Query: 274 -----GSEVY---------------KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
G E++ AL+ YS G+ A+ +FE+IQ + +C
Sbjct: 477 ALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVIFESIQQKNLV----LC 532
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLE- 372
++ + GQ ++A F +M +GL+P +L+AC + E+ +E
Sbjct: 533 NAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTACRSMGLVTEGWEYFDSMET 592
Query: 373 RDGFMVGKEASCTLAAWFKRLGVVEE 398
+ G E + R G ++E
Sbjct: 593 KYGVKPTTENYACMVDLLARCGYLDE 618
>gi|357444525|ref|XP_003592540.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481588|gb|AES62791.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 507
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 96/223 (43%), Gaps = 1/223 (0%)
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA 224
+ E N++ YT +I G+ ++ + + MK GF D VT +++ Y KA A
Sbjct: 220 NLEPNLKSYTILIEGWSQQQNLLKVDEVCREMKDDGFQPDVVTYGIIINAYCKAKKYDEA 279
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
+ ++ Y + + +D + A + Y A++
Sbjct: 280 IGIYHDMLSKNVNPSPHIYCTFITGLGNGSRMDEAFEFFEKSKASGFPPEAPTYNAVVSA 339
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM-RKAGLEP 343
Y + + A R+ ++ GI P+AR +++ G++++AY+ FQ M + G EP
Sbjct: 340 YCWSMRIDDAYRIVGEMKELGIGPNARTYDIILVHLIKGGRTKEAYSVFQRMSSETGCEP 399
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
S A+++ ENQL+ A+ +++ G + G TL
Sbjct: 400 SVSTYAIMVRMFCNENQLDMAMVVWNEMKDKGILPGIHMFSTL 442
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 91/215 (42%), Gaps = 2/215 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
++ F N + +I GK Q + N + MK+R + + T +++ Y +A +K
Sbjct: 113 QQGFNHNTEIFHALIEALGKIRQFKMIWNLVDEMKQRKLL-NGDTFSLIARRYVRAKVIK 171
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM-LDRGEVLLREMDAQEVYVGSEVYKAL 281
A +TFE ++ G + ++ ++ +++ + L +M + + Y L
Sbjct: 172 EALKTFERMEKYGLKPQISDFNKLIDVLCKSKFHVEKAQELFDKMRQWNLEPNLKSYTIL 231
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+ G+S N V ++ G PD ++INAY A + +A + +M +
Sbjct: 232 IEGWSQQQNLLKVDEVCREMKDDGFQPDVVTYGIIINAYCKAKKYDEAIGIYHDMLSKNV 291
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
PS ++ ++++ A EF + GF
Sbjct: 292 NPSPHIYCTFITGLGNGSRMDEAFEFFEKSKASGF 326
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 73/188 (38%), Gaps = 7/188 (3%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L ++ + Y I G G ++ A K GF + T +V Y +
Sbjct: 286 MLSKNVNPSPHIYCTFITGLGNGSRMDEAFEFFEKSKASGFPPEAPTYNAVVSAYCWSMR 345
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE---- 276
+ A E+K LG + R+Y +++ ++ G + + M ++ G E
Sbjct: 346 IDDAYRIVGEMKELGIGPNARTYDIILVHLIKGGRTKEAYSVFQRMSSE---TGCEPSVS 402
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
Y ++R + + A V+ ++ GI P M + LI + + A FQ M
Sbjct: 403 TYAIMVRMFCNENQLDMAMVVWNEMKDKGILPGIHMFSTLIISLCHENKLDDACRYFQQM 462
Query: 337 RKAGLEPS 344
G+ P+
Sbjct: 463 LDVGIRPT 470
>gi|302771417|ref|XP_002969127.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
gi|300163632|gb|EFJ30243.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
Length = 646
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 125/319 (39%), Gaps = 40/319 (12%)
Query: 127 WVR---FMKPRRADWLAVLKQLKLMEH-PLYLQVAELALLEESFEANIRDYTKIIHGYGK 182
W+R K R ++L L E P L++ E +ES+ ++ YT +I +
Sbjct: 27 WIRKHDCFKLRGVATASILSVLGNHEQLPAALELFESLKQDESYSLDVYAYTSLISILSR 86
Query: 183 KMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN-LKMAEETFEEIKLLGEPLDKR 241
+ M+R G + VT VM+ +Y K G+ + F+E+K L D
Sbjct: 87 ARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQEMKDLEISPDDY 146
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI 301
+Y +M+ A ++ L +EM Y ALL Y G + A + +
Sbjct: 147 TYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEM 206
Query: 302 QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQL 361
+ AGI+P+ LI AY AG +A +++ GL P + ++SA + +
Sbjct: 207 EAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERY 266
Query: 362 NRALEFLIDLERDG---------------------------FMVGKEASCT--LAAW--- 389
+ALE ++ + F +E +CT L W
Sbjct: 267 EKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSL 326
Query: 390 ---FKRLGVVEEVEHVLRE 405
F G++ EV +V RE
Sbjct: 327 LKSFGNCGMLTEVSNVFRE 345
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/261 (19%), Positives = 110/261 (42%), Gaps = 18/261 (6%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRD 172
+SP ++L+AA+ R D A LK+ +LL + +
Sbjct: 211 ISPNIVTYNELIAAYAR---AGLCDEAAALKK---------------SLLSKGLCPDEFT 252
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I + + + + A T M++ + VT +++ +Y + L + F+ ++
Sbjct: 253 YCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQ 312
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
D ++ S++ ++ GML + REM G + + L+ Y G +
Sbjct: 313 EKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVD 372
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
+ +++ + G+ P A L+ + G+ Q+ Q M +AGL+ SD C A ++
Sbjct: 373 YSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLI 432
Query: 353 SACEKENQLNRALEFLIDLER 373
+ Q + +++ +LE+
Sbjct: 433 HSYANSGQFFQLRKYIDELEK 453
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 71/169 (42%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
+ Y K A+ L + G D M+ M +K G ++ A + EEI+
Sbjct: 467 FVLAYCKCCMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQ 526
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
D +Y ++ Y R GM + E ++ EM Y LL Y+ +G + A
Sbjct: 527 LKPDGVTYNCLMSMYGREGMYHKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAA 586
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
RVF + A + PD L+ +Y G ++A + + M + G +P+
Sbjct: 587 RVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPT 635
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 99/251 (39%), Gaps = 4/251 (1%)
Query: 159 LALLEESFEA----NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
L L +E EA N Y ++ YGK + A L+ M+ G + VT ++
Sbjct: 165 LRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAA 224
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
Y++AG A + + G D+ +Y +++ A+ RA ++ EM
Sbjct: 225 YARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPN 284
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
Y L+ Y + +VF+ +Q TPD L+ ++ G + F+
Sbjct: 285 IVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFR 344
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
M++AG P +++ + ++ +++ L R G L A R G
Sbjct: 345 EMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREG 404
Query: 395 VVEEVEHVLRE 405
++ E V +E
Sbjct: 405 RWQQCEKVSQE 415
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 72/166 (43%)
Query: 155 QVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
Q+A L + +I+ + +I K+ I+ A L +++ D VT ++ M
Sbjct: 481 QLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSM 540
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
Y + G AEE E++ G+ + +Y +++ +Y + G +D + +M A V
Sbjct: 541 YGREGMYHKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPD 600
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAY 320
+ + L+ YS G + A V E + G P L++ Y
Sbjct: 601 NFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQITFKALLDGY 646
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 52/261 (19%), Positives = 101/261 (38%), Gaps = 14/261 (5%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
LL + + + ++ ++ + Q E M G ++ Y+ +G
Sbjct: 380 GLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSG 439
Query: 220 NLKMAEETFEEI-KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
+ +E+ K +PL + V+AY + M + ++ L ++ +V+
Sbjct: 440 QFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCCMDNEAQLALNQLYDNGHSPDIKVF 499
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
A++ + G E A ++ E I+ A + PD L++ Y G KA MR+
Sbjct: 500 NAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYHKAEEVMSEMRR 559
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDL-----ERDGFMVGKEASCTLAAWFKRL 393
AG P+ +L + K +++ A D+ D F TL + L
Sbjct: 560 AGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFN-----TLVGSYSSL 614
Query: 394 GVVEEVEHVLR---EYGLRET 411
G+ +E V+ E+G + T
Sbjct: 615 GLYKEALSVIEYMTEHGCQPT 635
>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 96/233 (41%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y I+ GK M+I++ M +G+ VT ++ K+ L A + ++
Sbjct: 804 YHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLM 863
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G +YG ++ ++ G ++ E L EM +Y LL GY + G++E
Sbjct: 864 SEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTE 923
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
+FE++ G+ PD + ++I+ G+ + F+ + GLEP L++
Sbjct: 924 KVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLI 983
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
K +L AL D+E+ G +L + + G E + E
Sbjct: 984 HGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEE 1036
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 93/204 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G + I AE MKR G D+ T +++ K+ ++ + EE+
Sbjct: 769 YNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMH 828
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G +Y +++ V++ MLD L ++ ++ Y LL G +GN E
Sbjct: 829 NKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIE 888
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ +F+ + G P+ + +L+N Y++AG ++K F++M + G+ P K +++
Sbjct: 889 DAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVI 948
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
+ +LN L + L G
Sbjct: 949 DTLCADGRLNDGLSYFKQLTDMGL 972
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 126/305 (41%), Gaps = 19/305 (6%)
Query: 109 QIICVSPETGNLSDLLAAWVRF----MKPRRADWLAVLKQLKLMEHPLYLQVAEL--ALL 162
QI+C + G L+D + + KP R ++ +L K + V+E+ AL
Sbjct: 284 QILC---DAGRLADAKDVFWKMKASDQKPDRVTYITLLD--KCGDSGDSRSVSEIWNALK 338
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+ + N+ YT + + ++ A + MK++G I Q + ++ + KA
Sbjct: 339 ADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFN 398
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG----MLDRGEVLLREMDAQEVYVGSEVY 278
A E F + + G + ++ + + ++G L R E++ + +V G+
Sbjct: 399 RALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGN--- 455
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
A+L G + G A+RVF ++ GI+PD ++I A + +A F M +
Sbjct: 456 -AVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIE 514
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
P + ++ K + N A + +L+ TL A R G V+E
Sbjct: 515 NRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKE 574
Query: 399 VEHVL 403
V +L
Sbjct: 575 VMQLL 579
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 93/243 (38%), Gaps = 35/243 (14%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ YT I G+ +++ A L M+ G D VT TV++ + AG L A++ F
Sbjct: 240 NVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVF 299
Query: 229 EEIKL----------------LGEPLDKRS------------YGSMVMAYVRA------- 253
++K G+ D RS Y V++Y A
Sbjct: 300 WKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQV 359
Query: 254 GMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
G +D + EM + + Y +L+ G+ A +F + G TP+
Sbjct: 360 GRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTH 419
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
L IN + +G+S KA ++ M+ G+ P +L K +L A +L+
Sbjct: 420 VLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKA 479
Query: 374 DGF 376
G
Sbjct: 480 MGI 482
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/216 (19%), Positives = 89/216 (41%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
A+ + +R Y+ ++ +GK+ + L M+ RG + + T+ + + +AG
Sbjct: 196 AMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAG 255
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
L+ A +++ G D + ++ AG L + + +M A + Y
Sbjct: 256 RLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYI 315
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
LL +G+S ++ A++ G + ++A G+ +A F M++
Sbjct: 316 TLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQK 375
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
G+ P ++S K ++ NRALE + G
Sbjct: 376 GIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHG 411
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 94/235 (40%), Gaps = 3/235 (1%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
+++G K ++ A+ +K G D +T T+M+ SKA N A + F E+
Sbjct: 457 VLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENR 516
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
D + S++ +AG + + E+ + Y LL G G +
Sbjct: 517 CAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVM 576
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
++ E + P+ +++ G+ A +M G P ++
Sbjct: 577 QLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGL 636
Query: 356 EKENQLNRALEFLIDLERDGFMVGKEAS-CTLAAWFKRLGVVEEVEHVLREYGLR 409
KE +L+ A +++ + A+ CT+ F R G+++E H +REY L+
Sbjct: 637 VKEGRLDEAFWMFCQMKK--VLAPDYATVCTILPSFVRSGLMKEALHTVREYILQ 689
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 93/240 (38%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
+AN+ + + G + +++A L MK G + + T ++ K+G + A
Sbjct: 132 IKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAM 191
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+ ++ + G R+Y +++A+ + + LL EM+A+ V Y +R
Sbjct: 192 DVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVL 251
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
G E A R+ ++ G PD +LI AG+ A F M+ + +P
Sbjct: 252 GQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDR 311
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+L C E L+ DG+ + ++G V+E V E
Sbjct: 312 VTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDE 371
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 74/158 (46%), Gaps = 2/158 (1%)
Query: 155 QVAEL--ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMV 212
+V EL +++E+ +I+ YT +I ++ + + + G D +T +++
Sbjct: 924 KVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLI 983
Query: 213 VMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY 272
K+G L+ A + +++ G + +Y S+++ +AG + E+ A+
Sbjct: 984 HGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWK 1043
Query: 273 VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDA 310
Y AL+RGYS++G+ E A + + G P++
Sbjct: 1044 PNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNS 1081
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 75/184 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L+ E F Y ++ G K I++AE M G + +++ Y AG+
Sbjct: 862 LMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGD 921
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ E FE + G D +SY ++ G L+ G +++ + Y
Sbjct: 922 TEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNL 981
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G +G E A ++ ++ GI P+ LI AG++ +A ++ + G
Sbjct: 982 LIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKG 1041
Query: 341 LEPS 344
+P+
Sbjct: 1042 WKPN 1045
>gi|410110075|gb|AFV61117.1| pentatricopeptide repeat-containing protein 123, partial
[Burroughsia fastigiata]
Length = 348
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 91/194 (46%), Gaps = 4/194 (2%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y +I YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 156 KNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDR 215
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ + +M++AY RAG++ + LL E+ + + + +L
Sbjct: 216 AAMLFQKLRSSGXEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDTAIHILA 274
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + F MR G P
Sbjct: 275 G---AGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFP 331
Query: 344 SDKCVALILSACEK 357
+A++L+A K
Sbjct: 332 DSDVIAIVLNAYGK 345
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 101/237 (42%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 56 NTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 115
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY ++V Y A + L R M + + Y +++ Y
Sbjct: 116 WGMRKMGIEPNVVSYNTLVRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKT 175
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G E
Sbjct: 176 LEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILF 235
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE +V R+
Sbjct: 236 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAG----AGRIEEATYVFRQ 288
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 97/236 (41%), Gaps = 6/236 (2%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I +GK + A + + MK G + + + ++ MY + A F E++
Sbjct: 25 YNTMIIVFGKAKLFREARSLISEMKTAGVTPNTTSYSTLLTMYVENKKFLEALSVFSEMR 84
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ LD + M+ Y + GM + L M + Y L+R Y G++E
Sbjct: 85 EIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLVRVY---GDAE 141
Query: 293 ---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
A +F +Q I + +I Y + +KA Q M+ G+EP+ +
Sbjct: 142 LFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYS 201
Query: 350 LILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
I+S K +L+RA L G + + T+ ++R G+V + +L E
Sbjct: 202 TIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQTMIVAYERAGLVAHAKRLLHE 257
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 6/130 (4%)
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
YSKA ++ F +K G D +Y +M++ + +A + L+ EM V
Sbjct: 3 YSKAISI------FSRLKSSGYXPDLVAYNTMIIVFGKAKLFREARSLISEMKTAGVTPN 56
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+ Y LL Y N A VF ++ D C ++I+ Y G +++A F
Sbjct: 57 TTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFW 116
Query: 335 NMRKAGLEPS 344
MRK G+EP+
Sbjct: 117 GMRKMGIEPN 126
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 104/247 (42%), Gaps = 25/247 (10%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQV--------AELALLEE 164
V+P T + S LL +V K A L+V +++ ++ L L +L + +E
Sbjct: 53 VTPNTTSYSTLLTMYVENKKFLEA--LSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKE 110
Query: 165 S-----------FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVV 213
+ E N+ Y ++ YG A + M+R+ + VT M++
Sbjct: 111 ADKLFWGMRKMGIEPNVVSYNTLVRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIM 170
Query: 214 MYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYV 273
+Y K + A +E++ G + +Y +++ + + G LDR +L +++ + +
Sbjct: 171 IYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEI 230
Query: 274 GSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAF 333
+++ ++ Y G A+R+ ++ PD I+ AG+ ++A F
Sbjct: 231 DQILFQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVF 286
Query: 334 QNMRKAG 340
+ AG
Sbjct: 287 RQAIDAG 293
>gi|293336971|ref|NP_001167873.1| uncharacterized protein LOC100381578 [Zea mays]
gi|223944573|gb|ACN26370.1| unknown [Zea mays]
gi|414585240|tpg|DAA35811.1| TPA: hypothetical protein ZEAMMB73_503732 [Zea mays]
Length = 640
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 84/195 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I K + A M +RG + T ++ K G K A FE +K
Sbjct: 316 YVLVIGALSKDGKPFEALAVFERMSKRGCPANAAMYTALIDSMGKFGREKEAMALFERMK 375
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G LD +YG +V R G L+ R + V V + Y +L+ G+ G +
Sbjct: 376 ATGIELDAVTYGVVVNCLCRFGNLEEALACFRSCVEKGVAVNAIFYTSLIDGFGKTGMVD 435
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ +FE + G PD+ +LI+A AG++ A ++ M G + + +++
Sbjct: 436 QAKELFEEMVAKGFVPDSYCYNVLIDALVKAGRTDDACAFYKRMEDDGCDQTVYTYTILI 495
Query: 353 SACEKENQLNRALEF 367
KE++ AL+F
Sbjct: 496 DGLFKEHKNEEALKF 510
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 87/210 (41%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
AN YT +I GK + + A MK G D VT V+V + GNL+ A
Sbjct: 346 ANAAMYTALIDSMGKFGREKEAMALFERMKATGIELDAVTYGVVVNCLCRFGNLEEALAC 405
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
F G ++ Y S++ + + GM+D+ + L EM A+ S Y L+
Sbjct: 406 FRSCVEKGVAVNAIFYTSLIDGFGKTGMVDQAKELFEEMVAKGFVPDSYCYNVLIDALVK 465
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G ++ A ++ ++ G +LI+ ++++A + +M G+ P+
Sbjct: 466 AGRTDDACAFYKRMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDSMIDKGITPTAAA 525
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFM 377
+ + + +RA L +L G +
Sbjct: 526 FRALSNGLCLSGKFSRAWRILDELAPMGVI 555
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/219 (19%), Positives = 87/219 (39%), Gaps = 6/219 (2%)
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL 221
+E+ N YT +I G+GK + A+ M +GF+ D V++ KAG
Sbjct: 410 VEKGVAVNAIFYTSLIDGFGKTGMVDQAKELFEEMVAKGFVPDSYCYNVLIDALVKAGRT 469
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
A ++ ++ G +Y ++ + + M + + + ++AL
Sbjct: 470 DDACAFYKRMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDSMIDKGITPTAAAFRAL 529
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
G ++G A R+ + + G+ P+ +IN G+ ++A + + G
Sbjct: 530 SNGLCLSGKFSRAWRILDELAPMGVIPETAH-EDMINVLCKTGRFKQACKLADGIVQKGR 588
Query: 342 EPSDKCVALILSACEKENQLNRALEFL-----IDLERDG 375
E + ++++A K + A + + I ER G
Sbjct: 589 EIPGRVRTMMINALRKAGNTDLAFKLVHSKIGIGYERSG 627
>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
Length = 592
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 97/217 (44%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+++ +S E NI Y +I+GY ++ +I A + ++G VT V++ + G
Sbjct: 343 SMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELG 402
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
K A+ F+E+ G D ++ +++ Y + G+++ +++ + ++Y
Sbjct: 403 RTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYT 462
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
A++ G NG + A FE + G+ PD +I+ Y G +A + M
Sbjct: 463 AVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDN 522
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
G ++ +I+ + N+++ FL ++ F
Sbjct: 523 GCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSF 559
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 93/213 (43%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E E N Y +++G KK Q A + L M++ + ++++ + K G L
Sbjct: 171 ENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLD 230
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A E+K P D +Y +++ A + + L EM +Y + +++
Sbjct: 231 GATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVI 290
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G G E A+ + + G+ PD ++I+ Y + GQ +A F +M +E
Sbjct: 291 DGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIE 350
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDG 375
P+ ++++ ++ +++ A++ ++ + G
Sbjct: 351 PNIISYNILINGYARQKKIDEAMQVCREISQKG 383
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 105/241 (43%), Gaps = 1/241 (0%)
Query: 159 LALLEE-SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSK 217
L L+E+ S + N Y+ +I + K + A + L MK++ D T + ++ K
Sbjct: 201 LRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCK 260
Query: 218 AGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
+ F E+ L + ++ S++ + G ++ E ++R M + V
Sbjct: 261 LSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVIT 320
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y ++ GY + G + A+ +F+++ I P+ +LIN Y + +A + +
Sbjct: 321 YNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREIS 380
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
+ GL+PS ++L + + A F ++ G + CTL + + G+VE
Sbjct: 381 QKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVE 440
Query: 398 E 398
E
Sbjct: 441 E 441
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 80/211 (37%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
++S +I Y+ +I K Q +N L M + T ++ K G ++
Sbjct: 241 QKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVE 300
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
AEE + G D +Y ++ Y G +DR + M + + Y L+
Sbjct: 301 DAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILI 360
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
GY+ + A +V I G+ P C +L++ G+++ A F M AG
Sbjct: 361 NGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHI 420
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLER 373
P +L K + A+ LER
Sbjct: 421 PDLYTHCTLLGGYFKNGLVEEAMSHFHKLER 451
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 96/245 (39%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E+ + ++ Y II GYG + Q+ A +M + + ++ +++ Y++
Sbjct: 309 MIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKK 368
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + EI G + ++ G + EM + +
Sbjct: 369 IDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCT 428
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL GY NG E A F ++ + ++ +I+ G+ KA+ F+ + G
Sbjct: 429 LLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIG 488
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
L P ++S +E L+ A + L +E +G + + F R V E++
Sbjct: 489 LHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMK 548
Query: 401 HVLRE 405
L E
Sbjct: 549 AFLEE 553
>gi|115479179|ref|NP_001063183.1| Os09g0417500 [Oryza sativa Japonica Group]
gi|50253027|dbj|BAD29277.1| putative fertility restorer homologue A [Oryza sativa Japonica
Group]
gi|113631416|dbj|BAF25097.1| Os09g0417500 [Oryza sativa Japonica Group]
Length = 618
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 90/198 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +IHG + Q A + R+G D+ T +++V G +++A E ++
Sbjct: 316 YNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQ 375
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G L+ +Y ++ Y ++G LD V M V Y +L+ G+S NG E
Sbjct: 376 QSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEME 435
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A ++ + G+ P+ LI+ + G A+ + M + G+ + V++++
Sbjct: 436 IAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLV 495
Query: 353 SACEKENQLNRALEFLID 370
+EN++ A+ F+++
Sbjct: 496 DGLCRENRVQDAVRFIME 513
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 90/205 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + N+ YT +I ++ I +AE L MK G + T ++ + K N
Sbjct: 199 MVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDN 258
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+K A + ++ G + + +++ +A + + + +M EV VY +
Sbjct: 259 IKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNS 318
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G +G ++ A F+ I G+ PD C++++ GQ Q A + M+++G
Sbjct: 319 LIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSG 378
Query: 341 LEPSDKCVALILSACEKENQLNRAL 365
+ + +++ K L+ AL
Sbjct: 379 IALNAAAYNVLIDEYCKSGNLDEAL 403
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 80/191 (41%), Gaps = 7/191 (3%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E E N+ Y+ +I G+ K +++ A M +G + VT T ++ ++K G++
Sbjct: 411 EVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMD 470
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE------VYVGSE 276
A +E++ G + + +V R + + E Q+ S
Sbjct: 471 AAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSV 530
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
Y L+ G ++G A F ++ +G+ PD L+I M G A + +M
Sbjct: 531 TYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADM 590
Query: 337 RKAGLEPSDKC 347
K G++P+ KC
Sbjct: 591 VKVGVKPT-KC 600
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/217 (18%), Positives = 87/217 (40%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
L + E N+ Y ++ + K+ I++A + + G + + V T ++ +A
Sbjct: 232 LEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQA 291
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
+ A+ F ++ Y S++ R+G +E+ + +
Sbjct: 292 NRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTC 351
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
++RG G + A R E +Q +GI +A +LI+ Y +G +A M +
Sbjct: 352 SIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSE 411
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
G+EP+ + ++ K ++ A+ ++ G
Sbjct: 412 VGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKG 448
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 42/238 (17%), Positives = 94/238 (39%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L ++ Y +I+ + + A M R + VT T M+ +
Sbjct: 164 MLGRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALCEEDC 223
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ AE F E+K G + +Y +++ ++ + + V ++ + ++
Sbjct: 224 IGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTT 283
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G A+ +F + + P + LI+ +G +Q+A FQ + + G
Sbjct: 284 LIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKG 343
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
L P + ++++ Q+ A FL +++ G + A L + + G ++E
Sbjct: 344 LRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDE 401
>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 99/221 (44%), Gaps = 6/221 (2%)
Query: 150 HPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLT 209
H L+ ++ E L+ N +T +IHG+ + QI + + M +G D V
Sbjct: 330 HRLFYEMCERGLI-----PNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYN 384
Query: 210 VMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQ 269
+V + K G+L A + + G DK +Y +++ + R G +D + +EMD
Sbjct: 385 TLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQN 444
Query: 270 EVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
+ + + AL+ G G A+R + AG+ PD ++++A+ G +Q
Sbjct: 445 GIELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTG 504
Query: 330 YTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLID 370
+ + M+ G P+ ++L+ K Q+ A + L+D
Sbjct: 505 FKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKNA-DMLLD 544
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 84/185 (45%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + + +I Y +++G+ K + A N + M RRG D+VT T ++ + + G+
Sbjct: 371 MLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGD 430
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A E +E+ G LD+ + +++ + G + E LREM + Y
Sbjct: 431 VDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKPDDVTYTM 490
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ + G+++ ++ + +Q G P+ +L+N GQ + A M G
Sbjct: 491 MMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKNADMLLDAMLNVG 550
Query: 341 LEPSD 345
+ P D
Sbjct: 551 VVPDD 555
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/247 (19%), Positives = 103/247 (41%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
+ +L+ F N+ + +++ + K+ I +A+ + +R V+ ++ Y K
Sbjct: 229 MEILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKV 288
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
GNL + ++ D +Y +++ A + +D L EM + + ++
Sbjct: 289 GNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIF 348
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
L+ G+S NG + + ++ + G+ PD + L+N + G A M +
Sbjct: 349 TTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIR 408
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
GL P ++ + ++ ALE +++++G + + L + G V +
Sbjct: 409 RGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVID 468
Query: 399 VEHVLRE 405
E LRE
Sbjct: 469 AERALRE 475
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 103/235 (43%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y+ +I+ K+ ++ A M RG I + V T ++ +S+ G + + +E++
Sbjct: 309 DVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESY 368
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+++ G D Y ++V + + G L ++ M + + Y L+ G+
Sbjct: 369 QKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRG 428
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G+ + A + + + GI D + LI G+ A A + M +AG++P D
Sbjct: 429 GDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKPDDVTY 488
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+++ A K+ + L +++ DG + L +LG ++ + +L
Sbjct: 489 TMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKNADMLL 543
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 16/217 (7%)
Query: 130 FMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNA 189
F + +R D + L ++ H + EL + + F NI K + GK Q A
Sbjct: 158 FCEAKRTD-----EALDILLH----RTPELGCVPDVFSYNI--LLKSLCNQGKSGQ---A 203
Query: 190 ENTLLAMKRRGFIC--DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMV 247
++ L M G +C D V ++ + K G++ A + F+E+ G P D +Y S+V
Sbjct: 204 DDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVV 263
Query: 248 MAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGIT 307
A +A +D+ E LR+M + V + Y L+ GYS G + A RVF+ ++ I
Sbjct: 264 HALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSIL 323
Query: 308 PDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
PD L+ + G+ ++A F M G P
Sbjct: 324 PDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPD 360
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 18/191 (9%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+ + ++ Y +I + ++ +A M +G + D+ ++ + G+L
Sbjct: 424 DHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLL 483
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY-----VG--- 274
A+E EI G LD +GS++ + G R MDAQ ++ VG
Sbjct: 484 KAKELISEIMNNGMRLDIVFFGSIINNLCKLG---------RVMDAQNIFDLTVNVGLHP 534
Query: 275 -SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAF 333
+ VY L+ GY + G E A RVF+A+ AGI P+ L+N Y G+ + + F
Sbjct: 535 DAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLF 594
Query: 334 QNMRKAGLEPS 344
+ M + G++PS
Sbjct: 595 REMLQKGIKPS 605
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 102/239 (42%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
A++ E N+ Y +++GY K +I + M ++G + +++ +AG
Sbjct: 561 AMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAG 620
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
A+ F E+ G ++K +Y ++ + D L +E+ A V +
Sbjct: 621 RTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLN 680
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
++ G E A+ +F +I +G+ P A +++I G ++A F +M+ A
Sbjct: 681 TMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNA 740
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
G EP + + ++ K+N++ RA +L ++ F + + L F G E
Sbjct: 741 GCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCRE 799
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 78/184 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + I + +I Y + A M+ G VT ++ + G
Sbjct: 387 MLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGK 446
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A E F ++ G DK +Y ++ + G L + + L+ E+ + + + +
Sbjct: 447 MDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGS 506
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G AQ +F+ G+ PDA + +L++ Y + G+ +KA F M AG
Sbjct: 507 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG 566
Query: 341 LEPS 344
+EP+
Sbjct: 567 IEPN 570
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 99/245 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ ++ Y+ ++H K + AE L M +G + D T ++ YS G
Sbjct: 247 MVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQ 306
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
K A F+E++ D + +++ + + G + + M + Y
Sbjct: 307 WKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTI 366
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+L GY+ G +F+ + GI P +LI AY G KA F MR G
Sbjct: 367 MLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHG 426
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
++P +++A + +++ A+E + G + K A L F G + + +
Sbjct: 427 VKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAK 486
Query: 401 HVLRE 405
++ E
Sbjct: 487 ELISE 491
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 87/226 (38%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G+ K+ + A + M +RG D VT + +V KA + AE ++
Sbjct: 224 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMV 283
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +++ Y G + +EM Q + L+ G +
Sbjct: 284 NKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIK 343
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ VF+ + G PD +++N Y G F M G+ P +++
Sbjct: 344 EARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLI 403
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
A L++A+ ++ G T+ A R+G +++
Sbjct: 404 KAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDD 449
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 47/256 (18%), Positives = 103/256 (40%), Gaps = 2/256 (0%)
Query: 150 HPLYLQVAELA--LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVT 207
H L+ EL ++ +I + II+ K ++ +A+N G D V
Sbjct: 479 HGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVV 538
Query: 208 LTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMD 267
+++ Y G ++ A F+ + G + YG++V Y + G +D G L REM
Sbjct: 539 YNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREML 598
Query: 268 AQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQ 327
+ + + +Y ++ G G + A+ F + +GI + ++++
Sbjct: 599 QKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFD 658
Query: 328 KAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLA 387
+A F+ +R ++ + +++ + ++ A + + R G + +
Sbjct: 659 EAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMI 718
Query: 388 AWFKRLGVVEEVEHVL 403
+ G+VEE E +
Sbjct: 719 TNLIKEGLVEEAEDMF 734
>gi|224090111|ref|XP_002308939.1| predicted protein [Populus trichocarpa]
gi|222854915|gb|EEE92462.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 108/247 (43%), Gaps = 4/247 (1%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+ E ++ + I+ Y Q A + MK D TL +++ +K G
Sbjct: 231 MTENGVGPDLVTHNIILSAYKTGAQYAKALSYFELMKGTNIRPDTTTLNIIIYCLTKLGQ 290
Query: 221 LKMAEETFE---EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
+ A F+ E + P D ++ S++ Y G ++ + M A+ +
Sbjct: 291 YEKAIGIFKSMREKRAECHP-DVVTFTSIIHLYSVNGQIENCRAVFSTMVAEGLKPNIVS 349
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y L+ Y+ +G ++ A VF AI+ +G+ PD L+N+Y + Q +KA F+ M+
Sbjct: 350 YNTLMGAYASHGMNKEALSVFNAIKNSGLRPDVVSYTSLLNSYGRSQQPKKAREVFEMMK 409
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
+ L+P+ ++ A L A+E L ++E+DG + CTL A R
Sbjct: 410 RDKLKPNIVSYNAMIDAYGSNGLLAEAVEVLREMEQDGIYPNAVSICTLLAACGRCSRKV 469
Query: 398 EVEHVLR 404
++ VL+
Sbjct: 470 NIDVVLQ 476
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 85/225 (37%), Gaps = 13/225 (5%)
Query: 154 LQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVV 213
LQ AE + N Y I Y + + A + +M++ I D VT TV++
Sbjct: 475 LQAAE----RRHIKLNTIAYNSAIGSYMNVGEFEKATSMYRSMRKSKVIPDAVTFTVLIS 530
Query: 214 MYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYV 273
K A E E+ L P+ K +Y S G + E + +M
Sbjct: 531 GCCKMTKYCEALEFLSEMMDLKIPMTKEAYSS--------GKITEAESMFNKMKMAGCSP 582
Query: 274 GSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAF 333
Y +L Y+ + + A + + ++ I PD C+ L+ A+ G K
Sbjct: 583 DVVTYTMMLHAYNAAEHWKKACALLQEMEEYNIQPDTIACSALMRAFNKGGDPSKVLILA 642
Query: 334 QNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMV 378
+ MR+ + SD ++SAC +E LI L F V
Sbjct: 643 EFMREKEIPLSDAIFFEMVSACSLLRDWRTTIE-LIKLMESSFSV 686
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 66/137 (48%), Gaps = 1/137 (0%)
Query: 240 KRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG-SEVYKALLRGYSMNGNSEGAQRVF 298
++++ ++ + G ++ ++ R M Q Y +++Y ++R ++ + ++ A+ +F
Sbjct: 99 RKNFPLLIKEITQKGSIEHSILVFRWMKNQRNYCARTDIYNMMIRLHARHNWTDQARGLF 158
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
+Q PDA C LINA+ +GQ + A ++M + + PS +++AC
Sbjct: 159 FEMQKWRCKPDAETCNALINAHGRSGQWRWAMNIMEDMLQKAIPPSRSTYNNLINACGSS 218
Query: 359 NQLNRALEFLIDLERDG 375
AL+ + +G
Sbjct: 219 GNWREALKLCKKMTENG 235
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 114/290 (39%), Gaps = 33/290 (11%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
A+ ++ YT +++ YG+ Q + A MKR + V+ M+ Y G
Sbjct: 372 AIKNSGLRPDVVSYTSLLNSYGRSQQPKKAREVFEMMKRDKLKPNIVSYNAMIDAYGSNG 431
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
L A E E++ G + S +++ A R +V+L+ + + + + + Y
Sbjct: 432 LLAEAVEVLREMEQDGIYPNAVSICTLLAACGRCSRKVNIDVVLQAAERRHIKLNTIAYN 491
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLIN--------------------- 318
+ + Y G E A ++ +++ + + PDA +LI+
Sbjct: 492 SAIGSYMNVGEFEKATSMYRSMRKSKVIPDAVTFTVLISGCCKMTKYCEALEFLSEMMDL 551
Query: 319 -------AYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDL 371
AY +G+ +A + F M+ AG P ++L A +A L ++
Sbjct: 552 KIPMTKEAYS-SGKITEAESMFNKMKMAGCSPDVVTYTMMLHAYNAAEHWKKACALLQEM 610
Query: 372 ERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRETYSKIPGSRSI 421
E A L F + G +V +L E+ +RE +IP S +I
Sbjct: 611 EEYNIQPDTIACSALMRAFNKGGDPSKV-LILAEF-MRE--KEIPLSDAI 656
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/196 (17%), Positives = 86/196 (43%), Gaps = 1/196 (0%)
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTL-TVMVVMYSKAGNLKMAEETFE 229
+++ +I +K I+++ MK + C + + +M+ ++++ A F
Sbjct: 100 KNFPLLIKEITQKGSIEHSILVFRWMKNQRNYCARTDIYNMMIRLHARHNWTDQARGLFF 159
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
E++ D + +++ A+ R+G ++ +M + + Y L+ +G
Sbjct: 160 EMQKWRCKPDAETCNALINAHGRSGQWRWAMNIMEDMLQKAIPPSRSTYNNLINACGSSG 219
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
N A ++ + + G+ PD ++++AY+ Q KA + F+ M+ + P +
Sbjct: 220 NWREALKLCKKMTENGVGPDLVTHNIILSAYKTGAQYAKALSYFELMKGTNIRPDTTTLN 279
Query: 350 LILSACEKENQLNRAL 365
+I+ K Q +A+
Sbjct: 280 IIIYCLTKLGQYEKAI 295
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/233 (18%), Positives = 92/233 (39%), Gaps = 3/233 (1%)
Query: 107 VKQIICVSPETGNLSDLLAAWV-RFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEES 165
V++++ + ++ ++ LL WV RF + + + Q +EH + V + +
Sbjct: 73 VQKVLELDHKSDDVEGLLNRWVGRFARKNFPLLIKEITQKGSIEHSIL--VFRWMKNQRN 130
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
+ A Y +I + + A M++ D T ++ + ++G + A
Sbjct: 131 YCARTDIYNMMIRLHARHNWTDQARGLFFEMQKWRCKPDAETCNALINAHGRSGQWRWAM 190
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
E++ P + +Y +++ A +G L ++M V + +L Y
Sbjct: 191 NIMEDMLQKAIPPSRSTYNNLINACGSSGNWREALKLCKKMTENGVGPDLVTHNIILSAY 250
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
A FE ++ I PD ++I GQ +KA F++MR+
Sbjct: 251 KTGAQYAKALSYFELMKGTNIRPDTTTLNIIIYCLTKLGQYEKAIGIFKSMRE 303
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 50/126 (39%)
Query: 243 YGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQ 302
Y M+ + R D+ L EM +E AL+ + +G A + E +
Sbjct: 138 YNMMIRLHARHNWTDQARGLFFEMQKWRCKPDAETCNALINAHGRSGQWRWAMNIMEDML 197
Query: 303 FAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLN 362
I P LINA +G ++A + M + G+ P +ILSA + Q
Sbjct: 198 QKAIPPSRSTYNNLINACGSSGNWREALKLCKKMTENGVGPDLVTHNIILSAYKTGAQYA 257
Query: 363 RALEFL 368
+AL +
Sbjct: 258 KALSYF 263
>gi|48475086|gb|AAT44155.1| hypothetical protein, contains pentrtricopeptide (PPR) repeat
[Oryza sativa Japonica Group]
gi|125568883|gb|EAZ10398.1| hypothetical protein OsJ_00231 [Oryza sativa Japonica Group]
Length = 836
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 74/152 (48%), Gaps = 4/152 (2%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D T T +V MY+K G L A++ + + E + ++ S+V Y AG D L+
Sbjct: 326 DVYTGTALVDMYAKCGRLDCAQKVLDAL----EHRNLTTWNSLVAGYANAGRFDIALELV 381
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
M + + L+ GYSMNG S A + I+ AG+TP+ LI+
Sbjct: 382 ELMKKNRLDPDITTWNGLITGYSMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHN 441
Query: 324 GQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
G+ + ++ M+K G++PS ++++L AC
Sbjct: 442 GEYEDSFYFCHEMQKDGVQPSLVTMSVLLRAC 473
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 96/212 (45%), Gaps = 10/212 (4%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E N+ + ++ G + + + A + +M ++G D T++ ++ + G L+ E
Sbjct: 254 EPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGME 313
Query: 227 T---FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
F +L EP D + ++V Y + G LD + +L ++ + + + +L+
Sbjct: 314 IHCFFLRNQL--EP-DVYTGTALVDMYAKCGRLDCAQKVLDALEHRNL----TTWNSLVA 366
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
GY+ G + A + E ++ + PD LI Y M GQS +A + ++ AG+ P
Sbjct: 367 GYANAGRFDIALELVELMKKNRLDPDITTWNGLITGYSMNGQSSQAVLLLRQIKAAGVTP 426
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDG 375
+ ++S + + F ++++DG
Sbjct: 427 NVVSWTSLISGSCHNGEYEDSFYFCHEMQKDG 458
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 52/266 (19%), Positives = 93/266 (34%), Gaps = 40/266 (15%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ + ++ GY + A + MK+ D T ++ YS G A
Sbjct: 357 NLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDITTWNGLITGYSMNGQSSQAVLLL 416
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYV--------------- 273
+IK G + S+ S++ G + EM V
Sbjct: 417 RQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRACAGL 476
Query: 274 -----GSEVY---------------KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
G E++ AL+ YS G+ A+ +FE+IQ + +C
Sbjct: 477 ALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVIFESIQQKNLV----LC 532
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLE- 372
++ + GQ ++A F +M +GL+P +L+AC + E+ +E
Sbjct: 533 NAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTACRSMGLVTEGWEYFDSMET 592
Query: 373 RDGFMVGKEASCTLAAWFKRLGVVEE 398
+ G E + R G ++E
Sbjct: 593 KYGVKPTTENYACMVDLLARCGYLDE 618
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 99/216 (45%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + E +I Y+ +I+ Y K ++ + + +G I + +T +V+ + ++G
Sbjct: 405 MVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 464
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A+E F+E+ G P +YG ++ G L++ + +M + +G +Y
Sbjct: 465 LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 524
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G + A +F ++ G+ PD ++I G +A F+ M++ G
Sbjct: 525 IIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 584
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
P D +++ A + L ++E + +++ GF
Sbjct: 585 CTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGF 620
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 89/216 (41%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ +A++ Y+ +I G + + L M R I D VT + ++ ++ K G L
Sbjct: 303 KGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLE 362
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A+E + E+ G D +Y S++ + + L + M ++ Y L+
Sbjct: 363 AKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILIN 422
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
Y + R+F I G+ P+ L+ + +G+ A FQ M G+ P
Sbjct: 423 SYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPP 482
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
S ++L +LN+ALE +++ +G
Sbjct: 483 SVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLG 518
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 92/203 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G+ K+ + A M +G D VT ++++ Y KA + F EI
Sbjct: 382 YNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREIS 441
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +Y ++V+ + ++G L+ + L +EM ++ V Y LL G NG
Sbjct: 442 SKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELN 501
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +FE +Q + +T + ++I+ A + A++ F ++ G++P +++
Sbjct: 502 KALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMI 561
Query: 353 SACEKENQLNRALEFLIDLERDG 375
K+ L+ A ++ DG
Sbjct: 562 GGLCKKGSLSEADMLFRKMKEDG 584
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/245 (19%), Positives = 98/245 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E F+ + Y +++ K A + M+ R V ++++ K G+
Sbjct: 230 MVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGS 289
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A F E+++ G D +Y S++ G D G +LREM + + + A
Sbjct: 290 FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSA 349
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ + G A+ ++ + GI PD LI+ + +A F M G
Sbjct: 350 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 409
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
EP ++++++ K +++ + ++ G + TL F + G + +
Sbjct: 410 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 469
Query: 401 HVLRE 405
+ +E
Sbjct: 470 ELFQE 474
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 79/191 (41%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKL 233
+ +I+G K ++ A + M GF D+VT ++ K+GN +A + F +++
Sbjct: 208 STLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEE 267
Query: 234 LGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEG 293
Y ++ + + G D L EM+ + + Y +L+ G +G +
Sbjct: 268 RNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDD 327
Query: 294 AQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILS 353
++ + I PD + LI+ + G+ +A + M G+ P ++
Sbjct: 328 GAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLID 387
Query: 354 ACEKENQLNRA 364
KEN L+ A
Sbjct: 388 GFCKENCLHEA 398
Score = 38.1 bits (87), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 37/201 (18%), Positives = 76/201 (37%), Gaps = 12/201 (5%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
++ G+ K M++ E+ D T+T+M+ Y + L A LG
Sbjct: 117 LVLGFCKGMELNGIEH------------DMYTMTIMINCYCRKKKLLFAFSVLGRAWKLG 164
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
D ++ ++V + G + L+ M + L+ G + G A
Sbjct: 165 YEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEAL 224
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
+ + + G PD ++N +G S A F+ M + ++ S ++++ +
Sbjct: 225 VLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSL 284
Query: 356 EKENQLNRALEFLIDLERDGF 376
K+ + AL ++E G
Sbjct: 285 CKDGSFDDALSLFNEMEMKGI 305
>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
Length = 825
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 98/241 (40%), Gaps = 35/241 (14%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
LL ++ Y +I G+ K+ ++ A + M+ +G + + VT + ++ K
Sbjct: 215 LLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKE 274
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM-------------- 266
+ AE ++ G + +Y ++ Y +GM + +EM
Sbjct: 275 MDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNS 334
Query: 267 ------------DAQEVYVGSEV---------YKALLRGYSMNGNSEGAQRVFEAIQFAG 305
+A++++ + Y ALL GY+ G G +F + G
Sbjct: 335 FMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEG 394
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
+ PD + LINAY G K+ F++M K G+ P + ++SA + +L+ A+
Sbjct: 395 VVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAM 454
Query: 366 E 366
E
Sbjct: 455 E 455
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 82/204 (40%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +IHGY + + M + D + K G +K A + F+ +
Sbjct: 297 YNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMV 356
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
L G D SYG+++ Y AG + + L M + V V+ L+ Y+ G +
Sbjct: 357 LKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMD 416
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
+ +FE + G+ PD + +I+A+ G+ A F +M G+ P + ++
Sbjct: 417 KSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLI 476
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
L +A E + D+ G
Sbjct: 477 QGQCNRRDLVKAKELISDMLSKGI 500
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 66/151 (43%), Gaps = 1/151 (0%)
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
T +++ Y +A + F + G D SY +++ + + G +D+ L +M
Sbjct: 191 TYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKM 250
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
+ Q + Y +L+ G + A+RV + AG+ P+ LI+ Y +G
Sbjct: 251 EEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMW 310
Query: 327 QKAYTAFQNMRKAGLEPS-DKCVALILSACE 356
+++ F+ M + L P C + + + C+
Sbjct: 311 KESVRVFKEMSSSLLVPDVGNCNSFMTALCK 341
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 71/172 (41%), Gaps = 2/172 (1%)
Query: 182 KKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKR 241
K +I+ A + +M +G D ++ ++ Y+ AG + + F + G D+
Sbjct: 341 KHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRH 400
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI 301
+ +++ AY R GM+D+ ++ +M Q V + ++ + G + A F +
Sbjct: 401 VFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHM 460
Query: 302 QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILS 353
G+ PD + + LI KA +M G+ P C+ S
Sbjct: 461 IDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPP--PCIKFFTS 510
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/291 (18%), Positives = 104/291 (35%), Gaps = 42/291 (14%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y ++HGY I +N M G + D+ ++ Y++ G + + F
Sbjct: 363 DVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMF 422
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG---- 284
E++ G D ++ +++ A+ R G LD M V + VY L++G
Sbjct: 423 EDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNR 482
Query: 285 --------------------------------YSMNGNSEGAQRVFEAIQFAGITPDARM 312
G + V + I G P+
Sbjct: 483 RDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLIT 542
Query: 313 CALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLID-L 371
L++ Y + G ++A +M G+EP ++ K +++ AL D L
Sbjct: 543 FNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDML 602
Query: 372 ERDGFMVGKEASCTLAAWF--KRLGVVEEVEHVLREYGLR---ETYSKIPG 417
+ + + L F +R V +E+ H + E G+ TY+ + G
Sbjct: 603 HKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLG 653
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 41/221 (18%), Positives = 80/221 (36%), Gaps = 35/221 (15%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E +I Y ++ GY K +I +A M + V+ +++ +A +A+E
Sbjct: 572 EPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKE 631
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
F E+ G + +Y +++ R D +LL ++ + V + ++R
Sbjct: 632 MFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMF 691
Query: 287 MNGNSEGAQRVFEAIQFAGI-----------------------------------TPDAR 311
G + A+ +F AI G+ TPD+R
Sbjct: 692 KVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSR 751
Query: 312 MCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
+ +I G+ KA + K G+ P +L++
Sbjct: 752 ILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLI 792
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 48/272 (17%), Positives = 96/272 (35%), Gaps = 35/272 (12%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK------ 222
N+ + ++ GY ++ A L +M+ G D T +V Y K G +
Sbjct: 539 NLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLF 598
Query: 223 -----------------------------MAEETFEEIKLLGEPLDKRSYGSMVMAYVRA 253
+A+E F E+ G + +Y +++ R
Sbjct: 599 RDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRN 658
Query: 254 GMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
D +LL ++ + V + ++R G + A+ +F AI G+ P
Sbjct: 659 NCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTY 718
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
++I + A F +M K+ P + + I+ + ++ +A +L +++
Sbjct: 719 RVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDK 778
Query: 374 DGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
G + + L F G E +L E
Sbjct: 779 KGILPEATTTSLLIYLFSVNGKYREYIKLLPE 810
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 16/217 (7%)
Query: 130 FMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNA 189
F + +R D + L ++ H + EL + + F NI K + GK Q A
Sbjct: 158 FCEAKRTD-----EALDILLH----RTPELGCVPDVFSYNI--LLKSLCNQGKSGQ---A 203
Query: 190 ENTLLAMKRRGFIC--DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMV 247
++ L M G +C D V ++ + K G++ A + F+E+ G P D +Y S+V
Sbjct: 204 DDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVV 263
Query: 248 MAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGIT 307
A +A +D+ E LR+M + V + Y L+ GYS G + A RVF+ ++ I
Sbjct: 264 HALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSIL 323
Query: 308 PDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
PD L+ + G+ ++A F M G P
Sbjct: 324 PDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPD 360
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 18/191 (9%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+ + ++ Y +I + ++ +A M +G + D+ ++ + G+L
Sbjct: 424 DHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLL 483
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY-----VG--- 274
A+E EI G LD +GS++ + G R MDAQ ++ VG
Sbjct: 484 KAKELISEIMNNGMRLDIVFFGSIINNLCKLG---------RVMDAQNIFDLTVNVGLHP 534
Query: 275 -SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAF 333
+ VY L+ GY + G E A RVF+A+ AGI P+ L+N Y G+ + + F
Sbjct: 535 DAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLF 594
Query: 334 QNMRKAGLEPS 344
+ M + G++PS
Sbjct: 595 REMLQKGIKPS 605
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 102/239 (42%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
A++ E N+ Y +++GY K +I + M ++G + +++ +AG
Sbjct: 561 AMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAG 620
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
A+ F E+ G ++K +Y ++ + D L +E+ A V +
Sbjct: 621 RTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLN 680
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
++ G E A+ +F +I +G+ P A +++I G ++A F +M+ A
Sbjct: 681 TMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNA 740
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
G EP + + ++ K+N++ RA +L ++ F + + L F G E
Sbjct: 741 GCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCRE 799
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 85/211 (40%), Gaps = 35/211 (16%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ YT +++GY K + + + M G D T V++ Y+ G L A F
Sbjct: 360 DVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIF 419
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++ G +Y +++ A R G +D +M Q V Y L++G+ +
Sbjct: 420 NEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTH 479
Query: 289 GN--------SE---------------------------GAQRVFEAIQFAGITPDARMC 313
G+ SE AQ +F+ G+ PDA +
Sbjct: 480 GSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVY 539
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
+L++ Y + G+ +KA F M AG+EP+
Sbjct: 540 NMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 570
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 100/268 (37%), Gaps = 35/268 (13%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G+ K+ + A + M +RG D VT + +V KA + AE ++
Sbjct: 224 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMV 283
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV---------YVGSEV------ 277
G D +Y +++ Y G + +EM Q + +GS
Sbjct: 284 NKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIK 343
Query: 278 --------------------YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
Y +L GY+ G +F+ + GI PD +LI
Sbjct: 344 EARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLI 403
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
AY G KA F MR G++P +++A + +++ A+E + G +
Sbjct: 404 KAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVV 463
Query: 378 VGKEASCTLAAWFKRLGVVEEVEHVLRE 405
K A L F G + + + ++ E
Sbjct: 464 PDKYAYHCLIQGFCTHGSLLKAKELISE 491
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 47/256 (18%), Positives = 103/256 (40%), Gaps = 2/256 (0%)
Query: 150 HPLYLQVAELA--LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVT 207
H L+ EL ++ +I + II+ K ++ +A+N G D V
Sbjct: 479 HGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVV 538
Query: 208 LTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMD 267
+++ Y G ++ A F+ + G + YG++V Y + G +D G L REM
Sbjct: 539 YNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREML 598
Query: 268 AQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQ 327
+ + + +Y ++ G G + A+ F + +GI + ++++
Sbjct: 599 QKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFD 658
Query: 328 KAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLA 387
+A F+ +R ++ + +++ + ++ A + + R G + +
Sbjct: 659 EAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMI 718
Query: 388 AWFKRLGVVEEVEHVL 403
+ G+VEE E +
Sbjct: 719 TNLLKEGLVEEAEDMF 734
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 90/225 (40%), Gaps = 7/225 (3%)
Query: 157 AELAL---LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVV 213
AEL L + FE + Y +IHGY Q + M RRG + D T +
Sbjct: 281 AELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMS 340
Query: 214 MYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYV 273
K G K A E F+ + G D +Y ++ Y G + L M+ +
Sbjct: 341 SLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVA 400
Query: 274 GSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAF 333
VY L+ Y G + A +F +Q G+ PDA +I A+ G+ A F
Sbjct: 401 DHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKF 460
Query: 334 QNMRKAGLEPSDKCV--ALILSACEKENQLNRALEFLIDLERDGF 376
M GL+P D V +LI C N L +A E + ++ G
Sbjct: 461 NQMIAMGLKP-DTIVYNSLIQGFCMHGN-LVKAKELISEMMSRGI 503
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 86/207 (41%), Gaps = 36/207 (17%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ ++HGY + + + N +M+ G + D +++ Y K G + A F +++
Sbjct: 370 YSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQ 429
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN-- 290
G D +YG+++ A+ R G L +M A + + VY +L++G+ M+GN
Sbjct: 430 ERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLV 489
Query: 291 ------------------------------SEG----AQRVFEAIQFAGITPDARMCALL 316
EG AQ +F+ + G PD L
Sbjct: 490 KAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSL 549
Query: 317 INAYQMAGQSQKAYTAFQNMRKAGLEP 343
I+ Y + G+ +KA+ M G+EP
Sbjct: 550 IDGYGLVGKMEKAFGVLDAMISVGIEP 576
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/394 (20%), Positives = 156/394 (39%), Gaps = 39/394 (9%)
Query: 15 AYQVFDEI---TAPKPGLRLSWRNLSLHRKPAKWSRSLRSGPALEAIKAEDMGKTQVKDD 71
+ +FDE+ T P P L+ +L R P+ S + R GP+L + + + +
Sbjct: 56 THHLFDELLRQTTPVPERALNGFLTALARAPS--SATCRDGPSLAVALFNRICREEARPR 113
Query: 72 TSMFTWIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRFM 131
++ T + + M C+A P G A + RF+
Sbjct: 114 VALPT---------------VCTYNILMDCCCRAH-------RPTVG-----FALFGRFL 146
Query: 132 KPR-RADWLAVLKQLKLMEHPLYLQVAELALL----EESFEANIRDYTKIIHGYGKKMQI 186
K + D + LK + H A LL E E + Y+ ++ + +
Sbjct: 147 KTGLKTDVIVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRS 206
Query: 187 QNAENTLLAMKRRGFIC--DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYG 244
Q A + L M ++ C + V+ ++ + + G + A F E+ G D +Y
Sbjct: 207 QRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYS 266
Query: 245 SMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFA 304
S + A +A +D+ E++LR+M + Y ++ GYS+ G + +F +
Sbjct: 267 SYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRR 326
Query: 305 GITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
G+ PD C +++ G+S++A F +M G +P +++L E +
Sbjct: 327 GLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDM 386
Query: 365 LEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
L +E +G + L + + G+++E
Sbjct: 387 LNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDE 420
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 103/247 (41%), Gaps = 3/247 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+ II+ K+ ++ A++ + G D +T ++ Y G ++ A + +
Sbjct: 511 FNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMI 570
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+G D +Y +++ Y R G +D G +L REM ++ V + Y +L G +G +
Sbjct: 571 SVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTV 630
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
GA+++ + +G T D C +++ +A F+ + ++ + + ++
Sbjct: 631 GAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMI 690
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRETY 412
A K + A E + G + + + G VEE +++ + L E
Sbjct: 691 DAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNM---FSLMEKS 747
Query: 413 SKIPGSR 419
P SR
Sbjct: 748 GCAPSSR 754
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 83/206 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++++ ++ Y+ I K + AE L M GF D+VT M+ YS G
Sbjct: 253 MMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQ 312
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
K F E+ G D + S + + + G M A+ Y
Sbjct: 313 WKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSV 372
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL GY+ G +F +++ GI D + +LI+AY G +A F M++ G
Sbjct: 373 LLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERG 432
Query: 341 LEPSDKCVALILSACEKENQLNRALE 366
+ P +++A + +L A++
Sbjct: 433 VMPDAWTYGTVIAAFSRMGRLADAMD 458
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 101/247 (40%), Gaps = 16/247 (6%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS--- 216
A++ E ++ Y+ ++ GY + +I + M +G T+T ++++
Sbjct: 568 AMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGV--KPTTITYGIILHGLFN 625
Query: 217 ---KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYV 273
G KM E E G +D + G ++ R D L +++ A V
Sbjct: 626 DGRTVGAKKMCHEMIES----GTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKF 681
Query: 274 GSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAF 333
+ ++ E A +F++I G+ P+A ++I G ++A F
Sbjct: 682 NIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMF 741
Query: 334 QNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCT--LAAWFK 391
M K+G PS + + I+ ++ ++++A +L + DG + EAS + + F
Sbjct: 742 SLMEKSGCAPSSRLLNNIIRVLLEKGEISKAGNYLSKV--DGKTISLEASTASLMLSLFS 799
Query: 392 RLGVVEE 398
R G E
Sbjct: 800 RKGKYRE 806
>gi|356503440|ref|XP_003520516.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Glycine max]
Length = 832
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 73/161 (45%)
Query: 195 AMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG 254
+M+++ D VT TV++ K A EEI L PL K Y S + AY + G
Sbjct: 528 SMRKKKIKTDSVTYTVLISGCCKMSKYGEALSFMEEIMHLKLPLSKEVYSSAICAYSKQG 587
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
+ E M + Y Y A+L Y+ N E A +FE ++ + I D CA
Sbjct: 588 QIVEAESTFNLMKSSGCYPDVVTYTAMLDAYNAAENWEKAYALFEEMEASSIKLDTIACA 647
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
L+ ++ GQ + + ++MR+ + SD ++SAC
Sbjct: 648 ALMRSFNKGGQPGRVLSLAESMREKEIPFSDTIFFEMVSAC 688
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 105/270 (38%), Gaps = 35/270 (12%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ +T IIH Y Q++N E M G + V+ ++ Y+ G A F
Sbjct: 327 DVVTFTSIIHLYSVCGQVENCEAAFNMMIAEGLKPNIVSYNALIGAYAARGMDNEAHLFF 386
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
EIK G D SY S++ AY R+ + + M ++ Y AL+ Y N
Sbjct: 387 NEIKQNGFRPDIVSYTSLLNAYGRSQKPHKARQIFDRMKRNKLKPNLVSYNALIDAYGSN 446
Query: 289 GNSEGAQRVFEAIQFAGITPDA-RMCALL-------------------------IN--AY 320
G A ++ ++ GI P+ +C LL +N AY
Sbjct: 447 GLLADAIKILREMEQEGIQPNVVSICTLLAACGRCSRKVKIDTVLTAAEMRGIKLNTVAY 506
Query: 321 QMA-------GQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
A G+ KA +++MRK ++ +++S C K ++ AL F+ ++
Sbjct: 507 NAAIGSCMNVGEYDKAIGLYKSMRKKKIKTDSVTYTVLISGCCKMSKYGEALSFMEEIMH 566
Query: 374 DGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+ KE + + + G + E E
Sbjct: 567 LKLPLSKEVYSSAICAYSKQGQIVEAESTF 596
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 99/252 (39%), Gaps = 4/252 (1%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+ E ++ + I+ + Q A + MK D TL +++ K
Sbjct: 247 MTENGVGPDLVTHNIILSAFKSGAQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQ 306
Query: 221 LKMAEETFE---EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
A E F E K P D ++ S++ Y G ++ E M A+ +
Sbjct: 307 YDKAIEIFNSMREKKSECTP-DVVTFTSIIHLYSVCGQVENCEAAFNMMIAEGLKPNIVS 365
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y AL+ Y+ G A F I+ G PD L+NAY + + KA F M+
Sbjct: 366 YNALIGAYAARGMDNEAHLFFNEIKQNGFRPDIVSYTSLLNAYGRSQKPHKARQIFDRMK 425
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
+ L+P+ ++ A L A++ L ++E++G + CTL A R
Sbjct: 426 RNKLKPNLVSYNALIDAYGSNGLLADAIKILREMEQEGIQPNVVSICTLLAACGRCSRKV 485
Query: 398 EVEHVLREYGLR 409
+++ VL +R
Sbjct: 486 KIDTVLTAAEMR 497
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/323 (17%), Positives = 111/323 (34%), Gaps = 55/323 (17%)
Query: 82 PNITEEQKQAISQFPRKMTKRCKAFVKQI--ICVSPETGNLSDLLAAWVRFMKPRRADWL 139
PNI + R M F +I P+ + + LL A+ R KP +A
Sbjct: 361 PNIVSYNALIGAYAARGMDNEAHLFFNEIKQNGFRPDIVSYTSLLNAYGRSQKPHKAR-- 418
Query: 140 AVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR 199
+ ++K + N+ Y +I YG + +A L M++
Sbjct: 419 QIFDRMK----------------RNKLKPNLVSYNALIDAYGSNGLLADAIKILREMEQE 462
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G + V++ ++ + + ++ G L+ +Y + + + + G D+
Sbjct: 463 GIQPNVVSICTLLAACGRCSRKVKIDTVLTAAEMRGIKLNTVAYNAAIGSCMNVGEYDKA 522
Query: 260 EVLLREMDAQEVYVGSEVYKALLRG----------------------------------- 284
L + M +++ S Y L+ G
Sbjct: 523 IGLYKSMRKKKIKTDSVTYTVLISGCCKMSKYGEALSFMEEIMHLKLPLSKEVYSSAICA 582
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
YS G A+ F ++ +G PD +++AY A +KAY F+ M + ++
Sbjct: 583 YSKQGQIVEAESTFNLMKSSGCYPDVVTYTAMLDAYNAAENWEKAYALFEEMEASSIKLD 642
Query: 345 DKCVALILSACEKENQLNRALEF 367
A ++ + K Q R L
Sbjct: 643 TIACAALMRSFNKGGQPGRVLSL 665
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/177 (19%), Positives = 77/177 (43%), Gaps = 6/177 (3%)
Query: 209 TVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
+M+ ++++ A F E++ D +Y +++ A+ RAG ++ +M
Sbjct: 155 NMMIRLHARHNRTDQARGLFFEMQEWRCKPDVETYNAIINAHGRAGQWRWAMNIMDDMLR 214
Query: 269 QEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
+ Y L+ +GN + A V + + G+ PD ++++A++ Q K
Sbjct: 215 AAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIILSAFKSGAQYSK 274
Query: 329 AYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCT 385
A + F+ M+ + P + +++ K Q ++A+E M K++ CT
Sbjct: 275 ALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIEIF------NSMREKKSECT 325
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 98/233 (42%), Gaps = 1/233 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ I Y K+ QI AE+T MK G D VT T M+ Y+ A N + A FEE++
Sbjct: 576 YSSAICAYSKQGQIVEAESTFNLMKSSGCYPDVVTYTAMLDAYNAAENWEKAYALFEEME 635
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
LD + +++ ++ + G R L M +E+ ++ ++ S+ +
Sbjct: 636 ASSIKLDTIACAALMRSFNKGGQPGRVLSLAESMREKEIPFSDTIFFEMVSACSILQDWR 695
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + I+ + + +++ +G+ + F M +G + + +++L
Sbjct: 696 TAVDMIKYIEPSLPVISSGCLNQFLHSLGKSGKIETMLKLFFKMLASGADVNLNTYSILL 755
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ LE L +E G KE +++ F + E V+RE
Sbjct: 756 KNLLSSGNWRKYLEVLQWMEDAGIHPSKEMYHDISS-FSQKCCGNENAAVIRE 807
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 51/126 (40%)
Query: 243 YGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQ 302
Y M+ + R D+ L EM E Y A++ + G A + + +
Sbjct: 154 YNMMIRLHARHNRTDQARGLFFEMQEWRCKPDVETYNAIINAHGRAGQWRWAMNIMDDML 213
Query: 303 FAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLN 362
A I P LINA +G ++A + M + G+ P +ILSA + Q +
Sbjct: 214 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIILSAFKSGAQYS 273
Query: 363 RALEFL 368
+AL +
Sbjct: 274 KALSYF 279
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/137 (19%), Positives = 63/137 (45%), Gaps = 1/137 (0%)
Query: 240 KRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG-SEVYKALLRGYSMNGNSEGAQRVF 298
++++ ++ + G ++ + R + Q+ Y +++Y ++R ++ + ++ A+ +F
Sbjct: 115 RKNFPFLIKELTQRGSIEHCNRVFRWLKNQKNYRARNDIYNMMIRLHARHNRTDQARGLF 174
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
+Q PD +INA+ AGQ + A +M +A + PS +++AC
Sbjct: 175 FEMQEWRCKPDVETYNAIINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSS 234
Query: 359 NQLNRALEFLIDLERDG 375
AL + +G
Sbjct: 235 GNWKEALNVCKKMTENG 251
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 116/257 (45%), Gaps = 13/257 (5%)
Query: 153 YLQVAELALLEESFEA----NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTL 208
Y+Q + + +E F+ N+ + +I GY + +I A+N M +R D V+
Sbjct: 317 YVQGERVEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR----DPVSW 372
Query: 209 TVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
M+ YS++G+ A F ++ G L++ S+ S + L+ G+ L +
Sbjct: 373 AAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVK 432
Query: 269 QEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
G V ALL Y G+ E A +F+ + AG D +I Y G ++
Sbjct: 433 GGYETGCFVGNALLLMYCKCGSIEEANDLFK--EMAG--KDIVSWNTMIAGYSRHGFGEE 488
Query: 329 AYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD-GFMVGKEASCTLA 387
A F++M++ GL+P D + +LSAC +++ ++ + +D G + +
Sbjct: 489 ALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMV 548
Query: 388 AWFKRLGVVEEVEHVLR 404
R G++EE ++++
Sbjct: 549 DLLGRAGLLEEAHNLMK 565
>gi|255660928|gb|ACU25633.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 481
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 94/203 (46%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
FE N + KII G+ ++ +A LL M ++G D+ +M+ Y K G ++ +
Sbjct: 41 FEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVLMIDSYGKEGIVQESV 100
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+ F++++ LG +SY ++ R G + +M + + + L+ G+
Sbjct: 101 KLFQKMEELGVERTIKSYDALFKVISRRGRYMMSKRYFNKMVNEGIEPTRHTFNVLIWGF 160
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
++G E A R FE ++ ITPD +IN Y + ++A F M++ ++P+
Sbjct: 161 FLSGKVETANRFFEDLKSREITPDVVTYNTMINGYTRVKKMEEAEKYFLEMKEKKIDPTV 220
Query: 346 KCVALILSACEKENQLNRALEFL 368
++ ++++ AL +
Sbjct: 221 VTYTTLIKGYASIDRVDDALRLV 243
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 86/202 (42%), Gaps = 8/202 (3%)
Query: 163 EESFEANIRDYT---KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
E E I+ Y K+I G+ M + N M G + T V++ + +G
Sbjct: 108 ELGVERTIKSYDALFKVISRRGRYMMSKRYFN---KMVNEGIEPTRHTFNVLIWGFFLSG 164
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A FE++K D +Y +M+ Y R ++ E EM +++ Y
Sbjct: 165 KVETANRFFEDLKSREITPDVVTYNTMINGYTRVKKMEEAEKYFLEMKEKKIDPTVVTYT 224
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L++GY+ + A R+ E ++ GI P+A + L+ A + +A + + M
Sbjct: 225 TLIKGYASIDRVDDALRLVEEMKGLGIKPNAITYSTLLPGLCDAEKMSEARSLLKEMVDK 284
Query: 340 GLEPSDKC--VALILSACEKEN 359
+ P D + LI S C+ N
Sbjct: 285 YIAPKDNSIFIRLISSQCKAGN 306
>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
Length = 667
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 95/206 (46%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E + + R Y ++ ++ + + AE L M +G VT T ++ Y K G +
Sbjct: 104 ELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMS 163
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A E +KL G + +Y ++V + G + + LL +M A V + Y L+
Sbjct: 164 DALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLI 223
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
RG ++G+ E A R+ ++ G+ D LINA G++ +A + F ++ G++
Sbjct: 224 RGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIK 283
Query: 343 PSDKCVALILSACEKENQLNRALEFL 368
P+ +++ K + + A +FL
Sbjct: 284 PNAVTFNSLINGLCKSGKADIAWKFL 309
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 83/187 (44%), Gaps = 4/187 (2%)
Query: 161 LLEESFEAN----IRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS 216
+L+E FE + T +I+ Y K+ ++ +A L MK RG + T +V +
Sbjct: 133 MLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFC 192
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
G + A +++ G D +Y ++ G ++ LLR M+ +
Sbjct: 193 NEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQY 252
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
Y AL+ +G ++ A +F++++ GI P+A LIN +G++ A+ + M
Sbjct: 253 TYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKM 312
Query: 337 RKAGLEP 343
AG P
Sbjct: 313 VSAGCTP 319
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 81/174 (46%), Gaps = 6/174 (3%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M R G+ D T ++V Y + + +A + F+++ L G D SY +++ AG
Sbjct: 1 MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
+D L EMD +++ +Y AL++G E + ++ G P R A
Sbjct: 61 IDEAVELFGEMDQPDMH----MYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPS-DKCVALILSACEKENQLNRALEFL 368
+++ ++++A Q M + GL P C A+I + C KE +++ AL L
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYC-KEGRMSDALRVL 169
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 85/236 (36%), Gaps = 31/236 (13%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE-- 230
+ +I GY + Q+ A + M RGF D V+ ++ +AG + A E F E
Sbjct: 13 FNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMD 72
Query: 231 -----------------------------IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEV 261
+K LG R+Y ++V R E
Sbjct: 73 QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEE 132
Query: 262 LLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQ 321
+L+EM + + A++ Y G A RV E ++ G P+ L+ +
Sbjct: 133 MLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFC 192
Query: 322 MAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
G+ KA T MR G+ P L++ + + A L +E DG +
Sbjct: 193 NEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLI 248
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 93/208 (44%), Gaps = 7/208 (3%)
Query: 154 LQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVV 213
L+V EL L + N+ Y ++ G+ + ++ A L M+ G D VT +++
Sbjct: 166 LRVLELMKLR-GCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIR 224
Query: 214 MYSKAGNLKMAEETFEEIKLL-GEPL--DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE 270
G++ E F ++L+ G+ L D+ +Y +++ A + G D+ L ++ +
Sbjct: 225 GQCIDGHI---ESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRG 281
Query: 271 VYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAY 330
+ + + +L+ G +G ++ A + E + AG TPD + I SQ+
Sbjct: 282 IKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGL 341
Query: 331 TAFQNMRKAGLEPSDKCVALILSACEKE 358
+ M + ++PS +++ KE
Sbjct: 342 SFIGEMLQKDVKPSTVNYTIVIHKLLKE 369
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 49/259 (18%), Positives = 104/259 (40%), Gaps = 21/259 (8%)
Query: 131 MKPRRADWLAVLKQLKLMEHPLYLQVAEL--ALLEESFEANIRDYTKIIHGYGKKMQIQN 188
+KP ++ V+ KL++ Y VA ++ ++ YT + Y + ++
Sbjct: 352 VKPSTVNYTIVIH--KLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNE 409
Query: 189 AENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVM 248
AEN L+ M + G D + ++ ++ G A +++ + ++ +Y ++
Sbjct: 410 AENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLR 469
Query: 249 AYVR------------AGMLDRGEV-----LLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
VR AG+ E+ L M E S Y ++L G+S +G +
Sbjct: 470 HLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRT 529
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALI 351
E A + ++ I+ + + L+ + + + A+ +M + G P +
Sbjct: 530 EEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHL 589
Query: 352 LSACEKENQLNRALEFLID 370
LS E Q ++A E ++
Sbjct: 590 LSGLICEGQTDKAKEIFMN 608
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 63/155 (40%)
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
K AEE +E+ G + +++ AY + G + +L M + Y AL
Sbjct: 128 KEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNAL 187
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
++G+ G A + ++ G+ PDA LLI + G + A+ + M GL
Sbjct: 188 VQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGL 247
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+++A K+ + ++A LE G
Sbjct: 248 IADQYTYNALINALCKDGRTDQACSLFDSLETRGI 282
Score = 38.1 bits (87), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 50/123 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L++ + + +YT +IH K+ T M G D VT T + Y G
Sbjct: 347 MLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGR 406
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L AE E+ G +D +Y +++ + G D +L++M + Y
Sbjct: 407 LNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFI 466
Query: 281 LLR 283
LLR
Sbjct: 467 LLR 469
>gi|168045050|ref|XP_001774992.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673739|gb|EDQ60258.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 385
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 113/269 (42%), Gaps = 40/269 (14%)
Query: 133 PRRADWLAVLKQLKLMEHPLYLQVAEL--ALLEESFEANIRDYTKIIHGYGKKMQIQNAE 190
P + + A++K E LY+Q ++ ++ E + +I Y +IHGYGK + E
Sbjct: 103 PDKYTYTAMIK--GCCEAGLYVQARKIFDEMMIEGVKPSIVTYNILIHGYGKAGLFREVE 160
Query: 191 NTLLAMK-----------------------------------RRGFICDQVTLTVMVVMY 215
L M+ R+G D VTL ++ Y
Sbjct: 161 RVLSTMEANNVAPDTVTWNTLIRVFGLNCKIPEMEQAYEGLLRQGLQPDMVTLNSLISAY 220
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
AG + E + ++ P+ + +Y ++ AY RAGM+D+ E + M A+ V S
Sbjct: 221 GTAGLFEKMESVTQYMQRYNYPMTRITYNIIMEAYGRAGMVDQMEETWKRMKAEFVKPNS 280
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
+ ++L Y +G ++V ++ D + I+A+Q A + F+
Sbjct: 281 STFCSMLSAYGRHGYWHNVEKVMRQARYFD-AADTAVYNAAIDAFQRAQNFEDMEKIFEE 339
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRA 364
M+ G P D ++++ A E+ ++++A
Sbjct: 340 MKLKGHAPDDVTYSILIGAYERIRRVDKA 368
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 126/299 (42%), Gaps = 13/299 (4%)
Query: 118 GNLSDLLAAWVRFMKPRRADWLAV-----LKQLKLMEHPLYLQVAELA-----LLEESFE 167
G + +A W F R +W LK L ++ Q AE + LLE+
Sbjct: 9 GTAVNGVALWQVFELVRAQEWYTADLSTYLKLLTMLAKAK--QAAEASNVFDCLLEDKLR 66
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMK-RRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
+T ++ + + Q + A +M+ G + D+ T T M+ +AG A +
Sbjct: 67 PTTAIFTALLTVFTQSNQFKKALEIFESMRLYEGCVPDKYTYTAMIKGCCEAGLYVQARK 126
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
F+E+ + G +Y ++ Y +AG+ E +L M+A V + + L+R +
Sbjct: 127 IFDEMMIEGVKPSIVTYNILIHGYGKAGLFREVERVLSTMEANNVAPDTVTWNTLIRVFG 186
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
+N ++ +E + G+ PD LI+AY AG +K + Q M++ +
Sbjct: 187 LNCKIPEMEQAYEGLLRQGLQPDMVTLNSLISAYGTAGLFEKMESVTQYMQRYNYPMTRI 246
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+I+ A + +++ E ++ + C++ + + R G VE V+R+
Sbjct: 247 TYNIIMEAYGRAGMVDQMEETWKRMKAEFVKPNSSTFCSMLSAYGRHGYWHNVEKVMRQ 305
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 77/172 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +++G+GK+ ++ A M + G D + ++MV G + A FEE+K
Sbjct: 931 YNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELK 990
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
L G D Y M+ R+ ++ L EM + + Y AL+ + G E
Sbjct: 991 LSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVE 1050
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A +++E +Q G+ P+ LI + M+G +AY ++ M G P+
Sbjct: 1051 EAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPN 1102
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 95/216 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ E + +++ Y+ ++ GK+ I+ L M+ G + T T+ + + +AG
Sbjct: 218 MVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGK 277
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + + G D +Y ++ A AG L+ + L +M A Y
Sbjct: 278 IDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYIT 337
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL +S +G+ + + + ++ G PD +LI+A G+ +A+ M+K G
Sbjct: 338 LLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQG 397
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+ P+ ++ + N+L+ ALE +E G
Sbjct: 398 VAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGL 433
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 84/180 (46%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M+ G++ D VT T+++ K G + A T + +K G + +Y +++ +R
Sbjct: 358 MEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNR 417
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
LD L M++ + + Y + Y +G S A + FE ++ GI P+ C
Sbjct: 418 LDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNA 477
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+ + G+ ++A F ++K GL P +++ K +++ A++ L ++E +G
Sbjct: 478 SLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENG 537
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 101/237 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ YT +I ++ NA+ L MK D+VT ++ +S G+L +E +
Sbjct: 296 DVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFW 355
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++ G D ++ ++ A + G +D L M Q V Y L+ G
Sbjct: 356 SEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRL 415
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
+ A +F +++ G+ A L I+ Y +G+S KA F+ M+ G+ P+
Sbjct: 416 NRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVAC 475
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
L + ++ +L A EF L++ G L + + G V++ +L E
Sbjct: 476 NASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSE 532
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/241 (19%), Positives = 100/241 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y + GK +I+ + M RG + +T +++ K+ +L A + +
Sbjct: 822 DVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLY 881
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +YG ++ ++ G L+ + EM +Y L+ G+
Sbjct: 882 YDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQ 941
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G+ E A +F + GI PD + +++++ M G+ A F+ ++ +GL+P C
Sbjct: 942 GDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCY 1001
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGL 408
L+++ + ++ AL ++ G L G+VEE + E L
Sbjct: 1002 NLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQL 1061
Query: 409 R 409
+
Sbjct: 1062 K 1062
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 98/227 (43%), Gaps = 4/227 (1%)
Query: 150 HPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLT 209
+ ++L++ + + S EA Y +I G K + A MK G D T
Sbjct: 772 YNVFLKLTKSFCITPSLEA----YNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYN 827
Query: 210 VMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQ 269
+ + K+G +K + +EE+ G + ++ ++ V++ LD+ L ++ +
Sbjct: 828 LFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSG 887
Query: 270 EVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
+ Y L+ G G E A++ FE + G P+ + +L+N + G + A
Sbjct: 888 DFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETA 947
Query: 330 YTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
F+ M K G+ P K ++++ +++ AL + +L+ G
Sbjct: 948 CELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGL 994
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 76/158 (48%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++E +++ Y+ ++ ++ +A + +K G D V +M+ ++
Sbjct: 954 MVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQR 1013
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ A F+E++ G D +Y ++++ AGM++ + E+ + + Y A
Sbjct: 1014 VEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNA 1073
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLIN 318
L+RG+SM+GN + A V++ + G P+ A L N
Sbjct: 1074 LIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQLPN 1111
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 93/235 (39%), Gaps = 4/235 (1%)
Query: 132 KPRRADWLAVLKQLKLMEHPLYLQVAEL--ALLEESFEANIRDYTKIIHGYGKKMQIQNA 189
KP R ++ +L K +H + E + + + ++ +T +I K ++ A
Sbjct: 329 KPDRVTYITLLD--KFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEA 386
Query: 190 ENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMA 249
TL MK++G + T ++ + L A E F ++ LG +Y +
Sbjct: 387 FGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDY 446
Query: 250 YVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPD 309
Y ++G + +M + A L + G E A+ F ++ G+ PD
Sbjct: 447 YGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPD 506
Query: 310 ARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
A +L+ Y AG+ A M + G +P + ++ K ++++ A
Sbjct: 507 AITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEA 561
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 83/198 (41%), Gaps = 1/198 (0%)
Query: 208 LTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMD 267
LT+ V+Y + G L+ A E+++ +G L+ SY ++ +++G + R M
Sbjct: 161 LTIFKVLYIRGG-LREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMV 219
Query: 268 AQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQ 327
++ + + Y AL+ + E + + ++ G+ P+ + I AG+
Sbjct: 220 SEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKID 279
Query: 328 KAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLA 387
+AY + M AG P +++ A +LN A E + ++ + TL
Sbjct: 280 EAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLL 339
Query: 388 AWFKRLGVVEEVEHVLRE 405
F G ++ ++ E
Sbjct: 340 DKFSDHGDLDAIKEFWSE 357
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 96/230 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I Y I + ++ A L M++ GF+ + + ++ + K+G + A + +
Sbjct: 156 SINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVY 215
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ G ++Y ++++A + ++ LL+EM++ + + +R
Sbjct: 216 RRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRA 275
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A + + + AG PD +LI+A AG+ A F M+ + +P
Sbjct: 276 GKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTY 335
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
+L L+ EF ++E DG++ L ++G V+E
Sbjct: 336 ITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDE 385
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 58/130 (44%)
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
E Y +L+ G +E A +F ++ AG TPD L ++A +G+ ++ + ++
Sbjct: 789 EAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEE 848
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGV 395
M G +P+ +++ K N L++A++ DL F L +LG
Sbjct: 849 MLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGR 908
Query: 396 VEEVEHVLRE 405
+EE + E
Sbjct: 909 LEEAKQFFEE 918
>gi|410109955|gb|AFV61057.1| pentatricopeptide repeat-containing protein 11, partial [Phyla
nodiflora]
Length = 431
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 81/184 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+LE+ N +T +I G+ K + A M + + D VT ++ K G+
Sbjct: 238 MLEKGLVPNSVTFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGD 297
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
LK A + +E+ + G DK +Y +++ + G LD + M + + + Y A
Sbjct: 298 LKQAHDLIDEMSMXGLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTA 357
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G G S A+++ + G+ PD R ++IN + G K + M++ G
Sbjct: 358 LISGLCQEGRSVDAEKMLREMLSVGLKPDTRTYTMIINEFCKKGDVWKGSKLLKEMQRDG 417
Query: 341 LEPS 344
PS
Sbjct: 418 HVPS 421
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 95/227 (41%), Gaps = 6/227 (2%)
Query: 146 KLMEHPLYLQVAELA------LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR 199
K++EH + L+ +L +LE + A++ + ++H + K+ I+ A++ A+ +
Sbjct: 112 KVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFDAITKW 171
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G V+ ++ Y + G+L + G D +Y ++ + +D
Sbjct: 172 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDA 231
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
L EM + + S + L+ G+ NG + A +++ + + PD LI
Sbjct: 232 NKLFDEMLEKGLVPNSVTFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYG 291
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALE 366
G ++A+ M GL+P ++ C KE L+ A E
Sbjct: 292 LCKKGDLKQAHDLIDEMSMXGLKPDKITYTTLIDGCCKEGDLDTAFE 338
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 97/218 (44%), Gaps = 4/218 (1%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
A+ ++ Y+ +I+G K+ ++ +A M +G + + VT T ++ + K G
Sbjct: 202 AMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVTFTTLIDGHCKNG 261
Query: 220 NLKMAEETFEEIKLLGEPL--DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
+ +A E +++ +L + L D +Y +++ + G L + L+ EM +
Sbjct: 262 WVDLAMEIYKQ--MLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPDKIT 319
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y L+ G G+ + A + + I D LI+ G+S A + M
Sbjct: 320 YTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 379
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
GL+P + +I++ K+ + + + L +++RDG
Sbjct: 380 SVGLKPDTRTYTMIINEFCKKGDVWKGSKLLKEMQRDG 417
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 99/216 (45%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + E +I Y+ +I+ Y K ++ + + +G I + +T +V+ + ++G
Sbjct: 376 MVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 435
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A+E F+E+ G P +YG ++ G L++ + +M + +G +Y
Sbjct: 436 LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 495
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G + A +F ++ G+ PD ++I G +A F+ M++ G
Sbjct: 496 IIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 555
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
P D +++ A + L ++E + +++ GF
Sbjct: 556 CTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGF 591
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 89/216 (41%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ +A++ Y+ +I G + + L M R I D VT + ++ ++ K G L
Sbjct: 274 KGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLE 333
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A+E + E+ G D +Y S++ + + L + M ++ Y L+
Sbjct: 334 AKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILIN 393
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
Y + R+F I G+ P+ L+ + +G+ A FQ M G+ P
Sbjct: 394 SYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPP 453
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
S ++L +LN+ALE +++ +G
Sbjct: 454 SVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLG 489
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 92/203 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G+ K+ + A M +G D VT ++++ Y KA + F EI
Sbjct: 353 YNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREIS 412
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +Y ++V+ + ++G L+ + L +EM ++ V Y LL G NG
Sbjct: 413 SKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELN 472
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +FE +Q + +T + ++I+ A + A++ F ++ G++P +++
Sbjct: 473 KALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMI 532
Query: 353 SACEKENQLNRALEFLIDLERDG 375
K+ L+ A ++ DG
Sbjct: 533 GGLCKKGSLSEADMLFRKMKEDG 555
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/245 (19%), Positives = 98/245 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E F+ + Y +++ K A + M+ R V ++++ K G+
Sbjct: 201 MVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGS 260
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A F E+++ G D +Y S++ G D G +LREM + + + A
Sbjct: 261 FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSA 320
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ + G A+ ++ + GI PD LI+ + +A F M G
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
EP ++++++ K +++ + ++ G + TL F + G + +
Sbjct: 381 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 440
Query: 401 HVLRE 405
+ +E
Sbjct: 441 ELFQE 445
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 79/191 (41%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKL 233
+ +I+G K ++ A + M GF D+VT ++ K+GN +A + F +++
Sbjct: 179 STLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEE 238
Query: 234 LGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEG 293
Y ++ + + G D L EM+ + + Y +L+ G +G +
Sbjct: 239 RNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDD 298
Query: 294 AQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILS 353
++ + I PD + LI+ + G+ +A + M G+ P ++
Sbjct: 299 GAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLID 358
Query: 354 ACEKENQLNRA 364
KEN L+ A
Sbjct: 359 GFCKENCLHEA 369
Score = 38.1 bits (87), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 37/201 (18%), Positives = 76/201 (37%), Gaps = 12/201 (5%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
++ G+ K M++ E+ D T+T+M+ Y + L A LG
Sbjct: 88 LVLGFCKGMELNGIEH------------DMYTMTIMINCYCRKKKLLFAFSVLGRAWKLG 135
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
D ++ ++V + G + L+ M + L+ G + G A
Sbjct: 136 YEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEAL 195
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
+ + + G PD ++N +G S A F+ M + ++ S ++++ +
Sbjct: 196 VLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSL 255
Query: 356 EKENQLNRALEFLIDLERDGF 376
K+ + AL ++E G
Sbjct: 256 CKDGSFDDALSLFNEMEMKGI 276
>gi|15225722|ref|NP_180822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75160493|sp|Q8S8P6.1|PP180_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32630
gi|20197234|gb|AAM14987.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330253613|gb|AEC08707.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 624
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 100/233 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y II+ Y K+ E L MK+ G + ++VT T+++ + K G + AE+ F+E++
Sbjct: 262 YNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMR 321
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D Y S++ R G + R +L E+ + + S Y AL+ G G
Sbjct: 322 ERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMG 381
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ + +Q G+ + LI+ Y G +A + M + G + I
Sbjct: 382 AAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIA 441
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
S + + + A ++L + G + + L + + G VEE + + E
Sbjct: 442 SCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVE 494
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 88/192 (45%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
++ F+A++ I + + + A+ L M G V+ T ++ +Y K GN++
Sbjct: 427 QKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVE 486
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A+ F E+ G + +Y M+ AY + G + L M+A + S Y +L+
Sbjct: 487 EAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLI 546
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G + N + A R+F + G+ ++ ++I+ AG+S +A+ + M++ G
Sbjct: 547 HGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYT 606
Query: 343 PSDKCVALILSA 354
+K ++ +
Sbjct: 607 IDNKVYTALIGS 618
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 110/265 (41%), Gaps = 22/265 (8%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHP--LYLQVAELALLEESFEANI 170
+ PE + ++ A+V+ + D+ V LK+M+ +Y +V L+E S
Sbjct: 255 IKPEAYTYNTIINAYVK-----QRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSV---- 305
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
K ++ +AE M+ RG D T ++ + GN+K A F+E
Sbjct: 306 -----------KNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDE 354
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
+ G +YG+++ + G + E+L+ EM ++ V + V+ L+ GY G
Sbjct: 355 LTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGM 414
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
+ A +++ ++ G D C + + + + +A M + G++ S
Sbjct: 415 VDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTN 474
Query: 351 ILSACEKENQLNRALEFLIDLERDG 375
++ KE + A +++ G
Sbjct: 475 LIDVYCKEGNVEEAKRLFVEMSSKG 499
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 73/159 (45%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E + + YT +I Y K+ ++ A+ + M +G + +T VM+ Y K G
Sbjct: 460 MMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGK 519
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+K A + ++ G D +Y S++ A +D L EM + + S Y
Sbjct: 520 IKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTV 579
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
++ G S G S+ A +++ ++ G T D ++ LI +
Sbjct: 580 MISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGS 618
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 88/196 (44%)
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
+LT++V + G ++ +++ +E + G + +Y +++ AYV+ E +L+ M
Sbjct: 226 SLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVM 285
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
V Y L+ NG A+++F+ ++ GI D + LI+ G
Sbjct: 286 KKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNM 345
Query: 327 QKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
++A+ F + + GL PS ++ K ++ A + +++ G + + TL
Sbjct: 346 KRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTL 405
Query: 387 AAWFKRLGVVEEVEHV 402
+ R G+V+E +
Sbjct: 406 IDGYCRKGMVDEASMI 421
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 1/200 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E+ + Y +I G K ++ AE + M+ +G QV ++ Y + G
Sbjct: 355 LTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGM 414
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A ++ ++ G D + ++ + R D + L M V + + Y
Sbjct: 415 VDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTN 474
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ Y GN E A+R+F + G+ P+A ++I AY G+ ++A NM G
Sbjct: 475 LIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANG 534
Query: 341 LEP-SDKCVALILSACEKEN 359
++P S +LI C +N
Sbjct: 535 MDPDSYTYTSLIHGECIADN 554
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 76/183 (41%), Gaps = 4/183 (2%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M ++G D+ + V +V K + + E F + G + S +V R G
Sbjct: 180 MVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGE 239
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
+++ + L++E + + + Y ++ Y + G + V + ++ G+ + L
Sbjct: 240 VEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTL 299
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV--ALILSACEKENQLNRALEFLIDLER 373
L+ G+ A F MR+ G+E SD V +LI C K N + RA +L
Sbjct: 300 LMELSVKNGKMSDAEKLFDEMRERGIE-SDVHVYTSLISWNCRKGN-MKRAFLLFDELTE 357
Query: 374 DGF 376
G
Sbjct: 358 KGL 360
>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 81/173 (46%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E ++ Y +I + K+ AE+ L M +G I VT MV + K L+ A +
Sbjct: 333 ETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQ 392
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
+ + G D ++ +++ Y +AG +D G L EM + + + Y AL+ G+
Sbjct: 393 MVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFC 452
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
G+ GAQ +FE + +G+ PD ++ + QK T ++++K+
Sbjct: 453 KVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDLQKS 505
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 91/218 (41%), Gaps = 13/218 (5%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E +AN+ Y+ I+ K A+N M +G + +T M+ Y G
Sbjct: 73 ESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWS 132
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
AE+ ++ D ++ +++ A+V+ G + E L REM + ++ + Y +++
Sbjct: 133 DAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMI 192
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPD-----------ARMCALLINAYQMAGQSQKAYT 331
G+ + E A+ +F+ + G +PD R LI+ + G A
Sbjct: 193 DGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQD 252
Query: 332 AFQNMRKAGLEPSD-KCVALILSACEKENQLNRALEFL 368
FQ M G+ P C L+ CE +L +ALE
Sbjct: 253 LFQEMISNGVSPDIVTCNTLLAGLCEN-GKLEKALEMF 289
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/228 (19%), Positives = 98/228 (42%), Gaps = 11/228 (4%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E + + ++ ++ +I+ + K+ ++ AE M RR +T + M+ + K
Sbjct: 141 MIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSR 200
Query: 221 LKMAEETFE---------EIKLLGEPLDK--RSYGSMVMAYVRAGMLDRGEVLLREMDAQ 269
L+ A+ F+ +I L +D R+ ++ + + G ++ + L +EM +
Sbjct: 201 LEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISN 260
Query: 270 EVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
V LL G NG E A +F+ Q + + D C ++IN + +A
Sbjct: 261 GVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEA 320
Query: 330 YTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
+ F ++ G+E +++ KE RA + +++ G +
Sbjct: 321 WDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGII 368
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 88/208 (42%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M G + VT T ++ + G + A + + G D +YG++V + G
Sbjct: 1 MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
+LR+MD ++ +Y A++ +GN AQ +F + GI P+
Sbjct: 61 TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+I+ Y G+ A ++M + ++P + +++A KE +++ A E ++ R
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180
Query: 376 FMVGKEASCTLAAWFKRLGVVEEVEHVL 403
++ F + +E+ +H+
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMF 208
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 60/138 (43%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D T +++ K + A + F + + G D +Y ++ +V+ G R E +
Sbjct: 300 DTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIY 359
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
EM + + + Y +++ G+ E A+++ +++ G +PD + LI Y A
Sbjct: 360 LEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKA 419
Query: 324 GQSQKAYTAFQNMRKAGL 341
G+ F M + GL
Sbjct: 420 GRVDDGLELFSEMCQRGL 437
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 76/195 (38%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++EE + + Y I++G K +A N L M + V + +V K GN
Sbjct: 36 MVEEGHQPDAVTYGTIVNGMCKLGDTVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGN 95
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A+ F E+ G + +Y M+ Y G E LLR+M + + + A
Sbjct: 96 HIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSA 155
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ + G GA+ ++ + I P + +I+ + + + A F M G
Sbjct: 156 LINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKG 215
Query: 341 LEPSDKCVALILSAC 355
P + ++ C
Sbjct: 216 CSPDIITLNTLIDGC 230
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 52/107 (48%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+++ E ++ ++ +I GY K ++ + M +RG + D +T ++ + K G
Sbjct: 396 SMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVG 455
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
+L A++ FEE+ G D ++ SM+ L +G +L ++
Sbjct: 456 DLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDL 502
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 41/237 (17%), Positives = 98/237 (41%), Gaps = 11/237 (4%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMV-----------VMYSKAGNL 221
Y+ +I G+ K ++++A++ M +G D +TL ++ + + GN+
Sbjct: 188 YSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNV 247
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
+A++ F+E+ G D + +++ G L++ + + ++ + + +
Sbjct: 248 NVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNII 307
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+ G + A +F ++ G+ D +LI + G +A + M G+
Sbjct: 308 INGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGI 367
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
PS ++ K+N+L A + + + +G TL + + G V++
Sbjct: 368 IPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDD 424
>gi|357481229|ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512235|gb|AES93858.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1508
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 90/204 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I YG+ AE+ +K GF D VT ++ +SK GN + + EE+
Sbjct: 374 YNAMISVYGRCGFALKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMV 433
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+G D+ +Y +++ Y + G D L R+M + + Y L+ E
Sbjct: 434 KMGFGKDEMTYNTIIHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIE 493
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +V + AG+ P + LI AY G+ +A F MR++G++ +++L
Sbjct: 494 EASKVMSEMLDAGVKPTLHTYSALICAYAKVGRRVEAEETFNRMRESGIKADHLAYSVML 553
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
+ N++ +A ++ GF
Sbjct: 554 DFFLRFNEIKKAAALYQEMIEAGF 577
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 109/252 (43%), Gaps = 12/252 (4%)
Query: 154 LQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVV 213
+Q A LA EE+ Y +I Y + + + + + MK G + T M+
Sbjct: 990 IQDAGLAPDEET-------YNTLITMYCRDHRPEEGLSLMHKMKSLGLEPKRDTYRSMIA 1042
Query: 214 MYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYV 273
+SK AEE FEE++ G LD+ Y M+ Y +G + E LL M +
Sbjct: 1043 AFSKQQLYDQAEELFEELRSNGYKLDRSFYHLMMKMYRTSGDHQKAENLLEIMKEAGIEP 1102
Query: 274 GSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAF 333
+ L+ Y +G E A R+ + ++ G D + +I+AY G ++
Sbjct: 1103 NTATMHLLMVSYGKSGQPEEADRILKNLRTMGAVLDTLPYSSVIDAYLKKGDAKAGIEKL 1162
Query: 334 QNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF-----MVGKEASCTLAA 388
M++A +EP + + A ++N A L L+ GF ++G+++ ++
Sbjct: 1163 TEMKEAAIEPDHRIWTCFIRAASLSGEVNDANNLLNALQAVGFDLPIRLLGEKSESLVSE 1222
Query: 389 WFKRLGVVEEVE 400
+ LG +E VE
Sbjct: 1223 VDQCLGRLEHVE 1234
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 84/178 (47%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E F+ +++ + ++ Y + QN ++ G D+ T ++ MY + +
Sbjct: 957 EAGFKPDLQIFNSVLKLYSSIEEFQNMGVIYQMIQDAGLAPDEETYNTLITMYCRDHRPE 1016
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
++K LG + +Y SM+ A+ + + D+ E L E+ + + Y ++
Sbjct: 1017 EGLSLMHKMKSLGLEPKRDTYRSMIAAFSKQQLYDQAEELFEELRSNGYKLDRSFYHLMM 1076
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+ Y +G+ + A+ + E ++ AGI P+ LL+ +Y +GQ ++A +N+R G
Sbjct: 1077 KMYRTSGDHQKAENLLEIMKEAGIEPNTATMHLLMVSYGKSGQPEEADRILKNLRTMG 1134
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/309 (19%), Positives = 127/309 (41%), Gaps = 30/309 (9%)
Query: 51 SGPALEAIKAEDMGKTQVKDDTSMFTWIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQI 110
SG A+E + +++GK ++ D + + + K+AI F + RC+
Sbjct: 317 SGLAIELL--DEVGKFGLRPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQ------ 368
Query: 111 ICVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANI 170
P+ + +++ + R +A+ L ++LK F +
Sbjct: 369 ----PDLWTYNAMISVYGRCGFALKAEHL--FEKLK----------------SNGFSPDA 406
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
Y +++ + K+ + + M + GF D++T ++ MY K G A + +
Sbjct: 407 VTYNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTIIHMYGKHGRHDEALRLYRD 466
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
+K G D +Y ++ +A ++ ++ EM V Y AL+ Y+ G
Sbjct: 467 MKSSGRNPDAVTYTVLIDLLGKASKIEEASKVMSEMLDAGVKPTLHTYSALICAYAKVGR 526
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
A+ F ++ +GI D +++++ + + +KA +Q M +AG P +
Sbjct: 527 RVEAEETFNRMRESGIKADHLAYSVMLDFFLRFNEIKKAAALYQEMIEAGFTPDTGLYEV 586
Query: 351 ILSACEKEN 359
+L A +EN
Sbjct: 587 MLPALVREN 595
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 133/301 (44%), Gaps = 26/301 (8%)
Query: 114 SPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFE--ANIR 171
SP +++ LL A + + R ++ V+++L+ M+ L + + + L+ E+F N+
Sbjct: 856 SPTVESVNGLLQALI--VDGRLSELYVVIQELQDMD--LKISKSSILLMLEAFAQAGNLF 911
Query: 172 DYTKIIHG-----YGKKMQ--------------IQNAENTLLAMKRRGFICDQVTLTVMV 212
+ K+ +G Y M +++ L M GF D ++
Sbjct: 912 EVQKVYNGMKAAGYFPTMHLYRLMIGLLCRFKRVRDVRVMLSEMGEAGFKPDLQIFNSVL 971
Query: 213 VMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY 272
+YS + ++ I+ G D+ +Y +++ Y R + G L+ +M + +
Sbjct: 972 KLYSSIEEFQNMGVIYQMIQDAGLAPDEETYNTLITMYCRDHRPEEGLSLMHKMKSLGLE 1031
Query: 273 VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTA 332
+ Y++++ +S + A+ +FE ++ G D L++ Y+ +G QKA
Sbjct: 1032 PKRDTYRSMIAAFSKQQLYDQAEELFEELRSNGYKLDRSFYHLMMKMYRTSGDHQKAENL 1091
Query: 333 FQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGK-EASCTLAAWFK 391
+ M++AG+EP+ + L++ + K Q A L +L G ++ S + A+ K
Sbjct: 1092 LEIMKEAGIEPNTATMHLLMVSYGKSGQPEEADRILKNLRTMGAVLDTLPYSSVIDAYLK 1151
Query: 392 R 392
+
Sbjct: 1152 K 1152
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 98/237 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I Y +I ++ ++ A M+ D T M+ +Y + G AE F
Sbjct: 335 DIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAMISVYGRCGFALKAEHLF 394
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++K G D +Y S++ A+ + G ++ + EM Y ++ Y +
Sbjct: 395 EKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTIIHMYGKH 454
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A R++ ++ +G PDA +LI+ A + ++A M AG++P+
Sbjct: 455 GRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEASKVMSEMLDAGVKPTLHTY 514
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ ++ A K + A E + G A + +F R +++ + +E
Sbjct: 515 SALICAYAKVGRRVEAEETFNRMRESGIKADHLAYSVMLDFFLRFNEIKKAAALYQE 571
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 82/208 (39%), Gaps = 3/208 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y IIH YGK + A MK G D VT TV++ + KA ++ A + E+
Sbjct: 444 YNTIIHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEASKVMSEML 503
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G +Y +++ AY + G E M + Y +L + +
Sbjct: 504 DAGVKPTLHTYSALICAYAKVGRRVEAEETFNRMRESGIKADHLAYSVMLDFFLRFNEIK 563
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG-LEPSDKCVALI 351
A +++ + AG TPD + +++ A Q+ ++ G + P D L+
Sbjct: 564 KAAALYQEMIEAGFTPDTGLYEVMLPALVRENMGDVIERVVQDTKELGSMNPHDISSVLV 623
Query: 352 LSACEKEN--QLNRALEFLIDLERDGFM 377
C L A+ +L+R+ F+
Sbjct: 624 KGGCYDHGAKMLKVAISNGYELDREIFL 651
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 88/197 (44%)
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
++ +M+ +++AGNL ++ + +K G Y M+ R + V+L EM
Sbjct: 896 SILLMLEAFAQAGNLFEVQKVYNGMKAAGYFPTMHLYRLMIGLLCRFKRVRDVRVMLSEM 955
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
+++ ++L+ YS + +++ IQ AG+ PD LI Y +
Sbjct: 956 GEAGFKPDLQIFNSVLKLYSSIEEFQNMGVIYQMIQDAGLAPDEETYNTLITMYCRDHRP 1015
Query: 327 QKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
++ + M+ GLEP +++A K+ ++A E +L +G+ + + +
Sbjct: 1016 EEGLSLMHKMKSLGLEPKRDTYRSMIAAFSKQQLYDQAEELFEELRSNGYKLDRSFYHLM 1075
Query: 387 AAWFKRLGVVEEVEHVL 403
++ G ++ E++L
Sbjct: 1076 MKMYRTSGDHQKAENLL 1092
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 54/130 (41%), Gaps = 2/130 (1%)
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA--YQMAGQSQKAYTAF 333
+VY A++ Y+ NGN E +F ++ G PD LINA A S A
Sbjct: 265 QVYNAMMGVYARNGNFEKVNEMFNLMRERGCEPDIVSFNTLINAKVKSCATVSGLAIELL 324
Query: 334 QNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRL 393
+ K GL P ++SAC +E+ L A+ +E + + + + R
Sbjct: 325 DEVGKFGLRPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAMISVYGRC 384
Query: 394 GVVEEVEHVL 403
G + EH+
Sbjct: 385 GFALKAEHLF 394
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 48/265 (18%), Positives = 105/265 (39%), Gaps = 35/265 (13%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
II YGK Q+AE+ + +++R D+ ++ Y+ +G + A F + G
Sbjct: 795 IIETYGKLKMWQSAESIVENLRQRCSKMDRKVWNALIHAYAFSGCYERARAIFNTMMREG 854
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
S ++ A + G L V+++E+ ++ + +L ++ GN Q
Sbjct: 855 PSPTVESVNGLLQALIVDGRLSELYVVIQELQDMDLKISKSSILLMLEAFAQAGNLFEVQ 914
Query: 296 RVFEAIQFAGITPDARMCALLIN-------------------------AYQMAGQSQKAY 330
+V+ ++ AG P + L+I Q+ K Y
Sbjct: 915 KVYNGMKAAGYFPTMHLYRLMIGLLCRFKRVRDVRVMLSEMGEAGFKPDLQIFNSVLKLY 974
Query: 331 TA---FQNM-------RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGK 380
++ FQNM + AGL P ++ +++ ++++ L + ++ G +
Sbjct: 975 SSIEEFQNMGVIYQMIQDAGLAPDEETYNTLITMYCRDHRPEEGLSLMHKMKSLGLEPKR 1034
Query: 381 EASCTLAAWFKRLGVVEEVEHVLRE 405
+ ++ A F + + ++ E + E
Sbjct: 1035 DTYRSMIAAFSKQQLYDQAEELFEE 1059
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/175 (20%), Positives = 75/175 (42%), Gaps = 4/175 (2%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM---AEETFE 229
Y ++ Y + + A++ L ++ I D VT+ ++ ++ + G LKM AE E
Sbjct: 755 YQSMVSVYCRIGFPETAQHLLYHAEKNDIILDNVTVHIIDIIET-YGKLKMWQSAESIVE 813
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
++ +D++ + +++ AY +G +R + M + E LL+ ++G
Sbjct: 814 NLRQRCSKMDRKVWNALIHAYAFSGCYERARAIFNTMMREGPSPTVESVNGLLQALIVDG 873
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
V + +Q + L++ A+ AG + + M+ AG P+
Sbjct: 874 RLSELYVVIQELQDMDLKISKSSILLMLEAFAQAGNLFEVQKVYNGMKAAGYFPT 928
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 38/189 (20%), Positives = 82/189 (43%), Gaps = 2/189 (1%)
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
+K+ +A + F +++ G + Y SMV Y R G + + LL + ++ + +
Sbjct: 728 TKSEQFDIASQLFSDMRFNGVEPSECLYQSMVSVYCRIGFPETAQHLLYHAEKNDIILDN 787
Query: 276 EVYKA--LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAF 333
++ Y + A+ + E ++ D ++ LI+AY +G ++A F
Sbjct: 788 VTVHIIDIIETYGKLKMWQSAESIVENLRQRCSKMDRKVWNALIHAYAFSGCYERARAIF 847
Query: 334 QNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRL 393
M + G P+ + V +L A + +L+ + +L+ + K + + F +
Sbjct: 848 NTMMREGPSPTVESVNGLLQALIVDGRLSELYVVIQELQDMDLKISKSSILLMLEAFAQA 907
Query: 394 GVVEEVEHV 402
G + EV+ V
Sbjct: 908 GNLFEVQKV 916
>gi|449438016|ref|XP_004136786.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Cucumis sativus]
Length = 707
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 87/209 (41%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+L E + NI Y +I Y + A + MKR GF D V+ T ++ + ++
Sbjct: 232 TMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCPDVVSYTSLISTFGRSQ 291
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
A E F+ +K + SY +++ AY G L + +LREM+ ++
Sbjct: 292 QPARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLPQAVDILREMEQDGIHPNVVSIC 351
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
LL G V A + GI + C I +Y G+ +KA +++M
Sbjct: 352 TLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNIGEYEKAINLYRSMENK 411
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFL 368
+P +++S C + ++ AL F
Sbjct: 412 TTKPDSVTFTILISGCCRMSKYEEALCFF 440
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 100/242 (41%), Gaps = 14/242 (5%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
++ Y Q A + MK D TL +++ K A E F ++
Sbjct: 141 VLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMR--- 197
Query: 236 EPLDKRS--------YGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
+KRS + S++ Y G ++ + + M A+ + Y AL+ Y+
Sbjct: 198 ---EKRSECRPDVVTFTSIIHLYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYAS 254
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
+G + A VF+ ++ +G PD LI+ + + Q +A F M++ +P+
Sbjct: 255 HGMDKEAFSVFDEMKRSGFCPDVVSYTSLISTFGRSQQPARAREVFDMMKRNKCKPNLVS 314
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYG 407
++ A L +A++ L ++E+DG + CTL A R G ++ VL
Sbjct: 315 YNALMDAYGSNGYLPQAVDILREMEQDGIHPNVVSICTLLAACGRFGQKVNIDSVLSAAE 374
Query: 408 LR 409
LR
Sbjct: 375 LR 376
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 103/264 (39%), Gaps = 19/264 (7%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRD 172
+ P ++ LLAA RF + D + L AEL N
Sbjct: 343 IHPNVVSICTLLAACGRFGQKVNIDSV--------------LSAAEL----RGIHLNTIA 384
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
I Y + + A N +M+ + D VT T+++ + + A F+E+
Sbjct: 385 CNSAIGSYMNIGEYEKAINLYRSMENKTTKPDSVTFTILISGCCRMSKYEEALCFFKEML 444
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
L PL Y SM+ AY + G L + E L + Y A++ YS + E
Sbjct: 445 DLRIPLSSEIYSSMICAYSKQGQLVKAESLFNSLKGSGCCPDLVTYTAMINAYSASEMWE 504
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
+++ ++ I D+ C+ L+ A+ Q+ + M++ G+ +D +L
Sbjct: 505 KVCALYQEMEANNIQLDSIACSALMKAFNKGNQASNVLILAEIMKEKGIPFNDANFFEML 564
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
SAC +A + LI+L F
Sbjct: 565 SACSILRDWRKATD-LINLMEPSF 587
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/203 (18%), Positives = 82/203 (40%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
++ N+ ++ G+ Q N ++ L A + RG + + + Y G +
Sbjct: 340 QDGIHPNVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNIGEYE 399
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A + ++ D ++ ++ R + +EM + + SE+Y +++
Sbjct: 400 KAINLYRSMENKTTKPDSVTFTILISGCCRMSKYEEALCFFKEMLDLRIPLSSEIYSSMI 459
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
YS G A+ +F +++ +G PD +INAY + +K +Q M ++
Sbjct: 460 CAYSKQGQLVKAESLFNSLKGSGCCPDLVTYTAMINAYSASEMWEKVCALYQEMEANNIQ 519
Query: 343 PSDKCVALILSACEKENQLNRAL 365
+ ++ A K NQ + L
Sbjct: 520 LDSIACSALMKAFNKGNQASNVL 542
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 101/262 (38%), Gaps = 9/262 (3%)
Query: 168 ANIRDYTK----IIHGYGKKMQIQNAENTLLAMKRRGFIC--DQVTLTVMVVMYSKAGNL 221
NIR T +IH K Q A +M+ + C D VT T ++ +YS G +
Sbjct: 164 TNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRSECRPDVVTFTSIIHLYSVRGQI 223
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
+ + F + G + SY +++ AY GM + EM Y +L
Sbjct: 224 EDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCPDVVSYTSL 283
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+ + + A+ VF+ ++ P+ L++AY G +A + M + G+
Sbjct: 284 ISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLPQAVDILREMEQDGI 343
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEH 401
P+ + +L+AC + Q L E G + A + + +G E E
Sbjct: 344 HPNVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNIG---EYEK 400
Query: 402 VLREYGLRETYSKIPGSRSIAL 423
+ Y E + P S + +
Sbjct: 401 AINLYRSMENKTTKPDSVTFTI 422
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/172 (19%), Positives = 73/172 (42%)
Query: 197 KRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGML 256
+R + +M+ ++++ + A F E++ D +Y +++ A+ RAG
Sbjct: 22 NQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQKWRCKPDVETYNALINAHGRAGQW 81
Query: 257 DRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALL 316
++ +M + + L+ GN A RV + + G+ PD ++
Sbjct: 82 RWATNIMEDMLRAAIPPSRSTFNNLINACGSCGNWREALRVCKKMTDNGVGPDLVTHNIV 141
Query: 317 INAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFL 368
++AY+ Q KA + F+ M+ + P + +++ K Q +A+E
Sbjct: 142 LSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIF 193
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 75/374 (20%), Positives = 147/374 (39%), Gaps = 23/374 (6%)
Query: 15 AYQVFDEITAPKPGLRLSWRN--LSLHRKPAKWSRSLRSGPALEAIKAEDMGKTQVKDDT 72
A +V ++T G L N LS ++ A++S++L E M T ++ DT
Sbjct: 119 ALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALS--------YFELMKGTNIRPDT 170
Query: 73 SMFTWIQIGPNITEEQKQAISQFPRKMTKR--CKAFV---KQIICVSPETGNLSDLLAAW 127
+ + ++ QAI F KR C+ V II + G + D A +
Sbjct: 171 TTLNIVIHCLIKVKQYGQAIEIFSSMREKRSECRPDVVTFTSIIHLYSVRGQIEDCKAVF 230
Query: 128 VRFM----KPRRADWLAVLKQLKL--MEHPLYLQVAELALLEESFEANIRDYTKIIHGYG 181
+ KP + A++ M+ + E+ F ++ YT +I +G
Sbjct: 231 STMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMK--RSGFCPDVVSYTSLISTFG 288
Query: 182 KKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKR 241
+ Q A MKR + V+ ++ Y G L A + E++ G +
Sbjct: 289 RSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLPQAVDILREMEQDGIHPNVV 348
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI 301
S +++ A R G + +L + + +++ + + + Y G E A ++ ++
Sbjct: 349 SICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNIGEYEKAINLYRSM 408
Query: 302 QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQL 361
+ PD+ +LI+ + ++A F+ M + S + + ++ A K+ QL
Sbjct: 409 ENKTTKPDSVTFTILISGCCRMSKYEEALCFFKEMLDLRIPLSSEIYSSMICAYSKQGQL 468
Query: 362 NRALEFLIDLERDG 375
+A L+ G
Sbjct: 469 VKAESLFNSLKGSG 482
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 95/217 (43%), Gaps = 6/217 (2%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y+ +I+G K + A M + + VT + ++ K+G + +
Sbjct: 333 NVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLI 392
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+EI G+P + +Y S++ + +D+ LL +M + + Y L+ G N
Sbjct: 393 DEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKN 452
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + AQR+++ + G + RM ++IN G +A + M G P
Sbjct: 453 GRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTY 512
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCT 385
++SA K N+ +A++ L + M+ +E+ C+
Sbjct: 513 ETLISALFKNNKNGKAVKLLRE------MIARESDCS 543
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 82/208 (39%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ + +I G K+ +++ A + L M ++G + VT T ++ Y + A+ F
Sbjct: 263 NVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVF 322
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
I L G + SY M+ + M+D L +EM + + + Y +L+ G +
Sbjct: 323 NTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKS 382
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + + I G + L+N Q KA M+ G++P
Sbjct: 383 GRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTY 442
Query: 349 ALILSACEKENQLNRALEFLIDLERDGF 376
++ K +L A DL G+
Sbjct: 443 TTLVDGLCKNGRLKDAQRIYQDLLCKGY 470
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/203 (19%), Positives = 81/203 (39%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT II + K + +A + M + + VT ++ + G LK A E+
Sbjct: 197 YTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMS 256
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
L + ++ ++ + G + + +L M Q V Y +L+ GY +
Sbjct: 257 LNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVN 316
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ VF I G+TP+ +++IN +A F+ M + P+ + ++
Sbjct: 317 KAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLI 376
Query: 353 SACEKENQLNRALEFLIDLERDG 375
K +++ + + ++ G
Sbjct: 377 DGLCKSGRISDVWDLIDEINNRG 399
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 108/272 (39%), Gaps = 51/272 (18%)
Query: 119 NLSDLLAAWVRFMK-----PRRADWLAVLKQLKLMEH----PLYLQVAELALLE-ESFEA 168
NL D ++++ + P ++ +L L M H + Q EL ++ E F
Sbjct: 32 NLDDAVSSFNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTF 91
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
NI +I+ + Q+ A + + + + G+ D VT+ ++ G +K A
Sbjct: 92 NI-----LINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFH 146
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAG---------------MLDRGEVLL---------- 263
+ + LD+ SYG+++ ++G +L R +V++
Sbjct: 147 DHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCK 206
Query: 264 -----------REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARM 312
EM +++Y + +L+ G+ + G + A + + + P+
Sbjct: 207 DKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYT 266
Query: 313 CALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
+LI+ G+ +KA + M K G+EP+
Sbjct: 267 FNILIDGLCKEGEVKKATSVLSVMIKQGVEPN 298
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 102/255 (40%), Gaps = 3/255 (1%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+LE + N+ Y +IHG K+ + +A L M G + D+ T +V + K G
Sbjct: 440 MLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGL 499
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ A FE +K G ++ Y +++ Y + G + G LL +M + S Y +
Sbjct: 500 VEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNS 559
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ GY N + A+ + + + I P A +LI+ + +A+ F M G
Sbjct: 560 LIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTG 619
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
P + A +L A + + G M + R G ++
Sbjct: 620 SHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAF 679
Query: 401 HVLR---EYGLRETY 412
+L+ E G +Y
Sbjct: 680 GILKRMHEVGCEPSY 694
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 85/192 (44%), Gaps = 14/192 (7%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+L E+ +AN Y+ +I GY K ++ + L M G + + +T ++ Y K
Sbjct: 509 SLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCK-- 566
Query: 220 NLKMAEETFEEIKLLGEPLDKR-------SYGSMVMAYVRAGMLDRGEVLLREMDAQEVY 272
E+ F+E +LL + + KR +Y ++ ++ D+ + +M + +
Sbjct: 567 -----EKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSH 621
Query: 273 VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTA 332
+Y A + Y +G + A+ + + GI PD + L I+AY G A+
Sbjct: 622 PDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGI 681
Query: 333 FQNMRKAGLEPS 344
+ M + G EPS
Sbjct: 682 LKRMHEVGCEPS 693
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 78/195 (40%), Gaps = 1/195 (0%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F+ +R Y ++ + + I ++ L M + TL MV Y K GN+ AE
Sbjct: 165 FKLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAE 224
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+I G LD +Y S+++ Y R +D + M + Y L+ G+
Sbjct: 225 LYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGF 284
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS- 344
+ A ++F + P R ++I A G+ +A F+ M + +P+
Sbjct: 285 CEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNV 344
Query: 345 DKCVALILSACEKEN 359
LI S CE N
Sbjct: 345 HTYTVLICSLCEDSN 359
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 62/145 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I GY K+ + A + M +R T T+++ K A + F+++
Sbjct: 557 YNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQML 616
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D Y + + AY G L EVL+ +M+A+ + + +Y + Y G+ +
Sbjct: 617 STGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSID 676
Query: 293 GAQRVFEAIQFAGITPDARMCALLI 317
GA + + + G P + LI
Sbjct: 677 GAFGILKRMHEVGCEPSYYTYSCLI 701
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/236 (18%), Positives = 87/236 (36%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E++ +R YT II + + A N M + + T TV++ + N
Sbjct: 302 EDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFD 361
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A++ + G +Y +++ Y + G+ +L M++ + Y L+
Sbjct: 362 DAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELI 421
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G+ N A + + + P+ +LI+ G AY M ++GL
Sbjct: 422 LGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLV 481
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
P + ++ + K + A L+ G + TL + ++G V +
Sbjct: 482 PDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSD 537
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 90/222 (40%), Gaps = 13/222 (5%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+LE+ ++ Y +I GY KK +A L M+ + T +++ + +
Sbjct: 369 GMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGK 428
Query: 220 NLKMAEETFEEIKLLGEPLDKR------SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYV 273
N+ A + LL + L+++ +Y ++ + G L LL M+ +
Sbjct: 429 NIHKA------MSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVP 482
Query: 274 GSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAF 333
Y + G E A+ +FE+++ GI + + + LI+ Y G+
Sbjct: 483 DEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLL 542
Query: 334 QNMRKAGLEPSDKCV-ALILSACEKENQLNRALEFLIDLERD 374
M AG P+ +LI C+++N L I ++RD
Sbjct: 543 DKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRD 584
>gi|297736717|emb|CBI25753.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 82/182 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y + + K + AE M RG D +T + ++ + A E FE++
Sbjct: 179 YNVTLKVFRKCRNLDRAEKLFDEMLERGVKPDNITFSTIISCARVSSLPNKAVEWFEKMP 238
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +M+ AY RAG +D L ++ + + L+R Y M+GN +
Sbjct: 239 EFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSGNFD 298
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
G V+E ++ G+ P+ + L++A A + +A ++ M GL+PS A +L
Sbjct: 299 GCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQPSWGTYAALL 358
Query: 353 SA 354
A
Sbjct: 359 RA 360
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 6/206 (2%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I YG+ + A + + D VT + ++ +Y +GN +EE+K
Sbjct: 249 YSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSGNFDGCLNVYEEMK 308
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
LG + Y +++ A RA + + + +EM + Y ALLR Y +E
Sbjct: 309 ALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQPSWGTYAALLRAYGRARYAE 368
Query: 293 GAQRVFEAIQFAG---ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
A V++ ++ G PD+ + LI Y +G+ +A M +AG EP+ +
Sbjct: 369 DALIVYKEMKEKGSGNCMPDSWTFSSLITIYSCSGKVSEAEAMLNAMLEAGFEPNIFVLT 428
Query: 350 LILSACEKENQLN---RALEFLIDLE 372
++ K N+ + R + L++L+
Sbjct: 429 SLIQCYGKANRTDEVVRTFDRLLELD 454
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 63/154 (40%), Gaps = 5/154 (3%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y ++ G+ + A+N M G T ++ Y +A + A +
Sbjct: 315 NLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQPSWGTYAALLRAYGRARYAEDALIVY 374
Query: 229 EEIKLLGE----PLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
+E+K G P D ++ S++ Y +G + E +L M V +L++
Sbjct: 375 KEMKEKGSGNCMP-DSWTFSSLITIYSCSGKVSEAEAMLNAMLEAGFEPNIFVLTSLIQC 433
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLIN 318
Y ++ R F+ + ITPD R C ++N
Sbjct: 434 YGKANRTDEVVRTFDRLLELDITPDDRFCGCMLN 467
>gi|147771903|emb|CAN75708.1| hypothetical protein VITISV_031421 [Vitis vinifera]
Length = 1313
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 95/209 (45%), Gaps = 1/209 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y +I + + A + L M++ GF +T + ++ Y++ G L A +
Sbjct: 893 NESTYNSLIQMFSGGDLVDEARDILAEMQKMGFKPQCLTFSAVIACYARLGRLPDAVGVY 952
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
EE+ LG ++ YGS++ + G ++ R+MD + V +L++ YS
Sbjct: 953 EEMVRLGVKPNEVVYGSLINGFSETGNVEEALCYFRKMDEFGISANQIVLTSLIKAYSKV 1012
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G EGA+ ++E ++ PD +IN Y G +A F ++R+ G
Sbjct: 1013 GCLEGAKTLYEGMKDLEGGPDIVASNSMINLYADLGLVSEAKLIFDDLRQKG-SADGVSF 1071
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFM 377
A ++ + L+ A++ ++++ GF+
Sbjct: 1072 ATMMYLYKNLGMLDEAIDVADEMKQSGFL 1100
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 76/164 (46%), Gaps = 6/164 (3%)
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
T ++ +Y KAG LK A + F E+ LG +D ++ +M+ G L E LL EM
Sbjct: 652 TYNTLIDLYGKAGRLKDAADVFAEMLKLGVAMDTITFNTMIYTCGSHGHLSEAETLLTEM 711
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDA---RMCALLINAYQMA 323
+ + + ++ Y L Y+ GN + A + + I+ G+ PD R ++ M
Sbjct: 712 EERGISPDTKTYNIFLSLYADGGNIDAALKCYRKIREVGLFPDVVTHRAVLHVLCERNMV 771
Query: 324 GQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
G+ + T M+++ + + + +++ E L++A F
Sbjct: 772 GEVE---TVIAEMKRSRVRVDEHSIPVVIKMYVNEGLLDKAKIF 812
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 100/238 (42%), Gaps = 6/238 (2%)
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
R II Y +K AEN + + G D V VMV Y KA A F+
Sbjct: 825 RTRVAIIDAYAEKGLWAEAENVFIGKRDLGQKKDVVEYNVMVKAYGKAKLYDKAFSLFKG 884
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
++ G ++ +Y S++ + ++D +L EM + A++ Y+ G
Sbjct: 885 MRNHGTWPNESTYNSLIQMFSGGDLVDEARDILAEMQKMGFKPQCLTFSAVIACYARLGR 944
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
A V+E + G+ P+ + LIN + G ++A F+ M + G+ + +
Sbjct: 945 LPDAVGVYEEMVRLGVKPNEVVYGSLINGFSETGNVEEALCYFRKMDEFGISANQIVLTS 1004
Query: 351 ILSACEKENQLNRA---LEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A K L A E + DLE +V AS ++ + LG+V E + + +
Sbjct: 1005 LIKAYSKVGCLEGAKTLYEGMKDLEGGPDIV---ASNSMINLYADLGLVSEAKLIFDD 1059
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 109/268 (40%), Gaps = 36/268 (13%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+ +I+ G + AE L M+ RG D T + + +Y+ GN+ A + + +I+
Sbjct: 688 FNTMIYTCGSHGHLSEAETLLTEMEERGISPDTKTYNIFLSLYADGGNIDAALKCYRKIR 747
Query: 233 ----------------------LLGEP-------------LDKRSYGSMVMAYVRAGMLD 257
++GE +D+ S ++ YV G+LD
Sbjct: 748 EVGLFPDVVTHRAVLHVLCERNMVGEVETVIAEMKRSRVRVDEHSIPVVIKMYVNEGLLD 807
Query: 258 RGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
+ ++ L E ++ + S A++ Y+ G A+ VF + G D +++
Sbjct: 808 KAKIFLEEHLLEDE-LSSRTRVAIIDAYAEKGLWAEAENVFIGKRDLGQKKDVVEYNVMV 866
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
AY A KA++ F+ MR G P++ ++ + ++ A + L ++++ GF
Sbjct: 867 KAYGKAKLYDKAFSLFKGMRNHGTWPNESTYNSLIQMFSGGDLVDEARDILAEMQKMGFK 926
Query: 378 VGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ A + RLG + + V E
Sbjct: 927 PQCLTFSAVIACYARLGRLPDAVGVYEE 954
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 75/194 (38%), Gaps = 6/194 (3%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+ F + + K++ Y Q+ L M R + D T VM + K G
Sbjct: 1096 QSGFLRDCASFNKVMACYATNGQLSACGELLHEMISRRILPDTGTFKVMFTVLKKGGLPT 1155
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYV--RAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A E G+P +++ + V + V A L+ E L EV + S Y
Sbjct: 1156 EAVTQLESSYQEGKPYARQAVITSVFSTVGLHAFALESCETFLN----AEVDLDSSFYNV 1211
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+ Y +G+ + A ++F +Q G+ PD L Y AG + + ++
Sbjct: 1212 AIYAYGASGSIDKALKMFMKMQDEGLEPDLVTYINLAGCYGKAGMLEGLKRIYSQLKYRE 1271
Query: 341 LEPSDKCVALILSA 354
+EP++ I+ A
Sbjct: 1272 IEPNESLFKAIIDA 1285
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 50/268 (18%), Positives = 90/268 (33%), Gaps = 36/268 (13%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I YGK ++++A + M + G D +T M+ G+L AE E++
Sbjct: 653 YNTLIDLYGKAGRLKDAADVFAEMLKLGVAMDTITFNTMIYTCGSHGHLSEAETLLTEME 712
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRG--------------------------------- 259
G D ++Y + Y G +D
Sbjct: 713 ERGISPDTKTYNIFLSLYADGGNIDAALKCYRKIREVGLFPDVVTHRAVLHVLCERNMVG 772
Query: 260 --EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
E ++ EM V V +++ Y G + A ++F +R +I
Sbjct: 773 EVETVIAEMKRSRVRVDEHSIPVVIKMYVNEGLLDKA-KIFLEEHLLEDELSSRTRVAII 831
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
+AY G +A F R G + +++ A K ++A + G
Sbjct: 832 DAYAEKGLWAEAENVFIGKRDLGQKKDVVEYNVMVKAYGKAKLYDKAFSLFKGMRNHGTW 891
Query: 378 VGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ +L F +V+E +L E
Sbjct: 892 PNESTYNSLIQMFSGGDLVDEARDILAE 919
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 54/305 (17%), Positives = 105/305 (34%), Gaps = 67/305 (21%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFE--- 229
Y +I+G+ + ++ A M G +Q+ LT ++ YSK G L+ A+ +E
Sbjct: 967 YGSLINGFSETGNVEEALCYFRKMDEFGISANQIVLTSLIKAYSKVGCLEGAKTLYEGMK 1026
Query: 230 -------------------------EIKLLGEPL------DKRSYGSMVMAYVRAGMLDR 258
E KL+ + L D S+ +M+ Y GMLD
Sbjct: 1027 DLEGGPDIVASNSMINLYADLGLVSEAKLIFDDLRQKGSADGVSFATMMYLYKNLGMLDE 1086
Query: 259 GEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLIN 318
+ EM + ++ Y+ NG + + I PD ++
Sbjct: 1087 AIDVADEMKQSGFLRDCASFNKVMACYATNGQLSACGELLHEMISRRILPDTGTFKVMFT 1146
Query: 319 AYQMAGQSQKAYTAFQNMRKAGLEPSDKCV-----------ALILSACEK---------- 357
+ G +A T ++ + G + + V A L +CE
Sbjct: 1147 VLKKGGLPTEAVTQLESSYQEGKPYARQAVITSVFSTVGLHAFALESCETFLNAEVDLDS 1206
Query: 358 ------------ENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+++AL+ + ++ +G LA + + G++E ++ + +
Sbjct: 1207 SFYNVAIYAYGASGSIDKALKMFMKMQDEGLEPDLVTYINLAGCYGKAGMLEGLKRIYSQ 1266
Query: 406 YGLRE 410
RE
Sbjct: 1267 LKYRE 1271
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 56/130 (43%)
Query: 210 VMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQ 269
V+ ++S G A E+ E LD Y + AY +G +D+ + +M +
Sbjct: 1176 VITSVFSTVGLHAFALESCETFLNAEVDLDSSFYNVAIYAYGASGSIDKALKMFMKMQDE 1235
Query: 270 EVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
+ Y L Y G EG +R++ +++ I P+ + +I+AY+ A + A
Sbjct: 1236 GLEPDLVTYINLAGCYGKAGMLEGLKRIYSQLKYREIEPNESLFKAIIDAYRSAKRHDLA 1295
Query: 330 YTAFQNMRKA 339
Q M+ A
Sbjct: 1296 ELVSQEMKFA 1305
>gi|356520039|ref|XP_003528673.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g11690-like [Glycine max]
Length = 585
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 115/269 (42%), Gaps = 23/269 (8%)
Query: 159 LALLEE-SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSK 217
LA+LEE F N+ YT +I+G K ++ A+ M R G + + + V++ + K
Sbjct: 224 LAMLEEFGFSLNVVIYTTLIYGCCKSGDVRLAKKLFCTMDRLGLVANHHSCGVLMNGFFK 283
Query: 218 AGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
G + +E +K G + +Y ++ Y A M+D+ + EM + + G
Sbjct: 284 QGLQREGFXMYENMKPSGIVPNAYAYNCVISEYCNARMVDKALNVFAEMREKGIAYGVIT 343
Query: 278 YK--ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
Y L RG A ++ + G++P+ +LIN + G+ A F
Sbjct: 344 YNXGGLCRGKKFG----EAVKIVHQVNKVGLSPNIVTYNILINGFCDVGKIDTAVRLFNQ 399
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER--------------DGF--MVG 379
++ GL P+ +++ K L AL+ + ++E D F +
Sbjct: 400 LKSNGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIPPSKVTYXILIDAFARLNY 459
Query: 380 KEASCTLAAWFKRLGVVEEVEHVLREYGL 408
+ +C + + ++ G+V +V H + +GL
Sbjct: 460 TKKTCEMHSLMEKSGLVSDVXHSVLIHGL 488
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 66/142 (46%)
Query: 238 LDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRV 297
+D S+G M+ AG L +G LL ++ + +Y L+ G +G+ A+++
Sbjct: 199 MDAYSFGIMIKGRCEAGDLMKGFRLLAMLEEFGFSLNVVIYTTLIYGCCKSGDVRLAKKL 258
Query: 298 FEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEK 357
F + G+ + C +L+N + G ++ + ++NM+ +G+ P+ ++S
Sbjct: 259 FCTMDRLGLVANHHSCGVLMNGFFKQGLQREGFXMYENMKPSGIVPNAYAYNCVISEYCN 318
Query: 358 ENQLNRALEFLIDLERDGFMVG 379
+++AL ++ G G
Sbjct: 319 ARMVDKALNVFAEMREKGIAYG 340
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 60/144 (41%)
Query: 198 RRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLD 257
+R + D + +M+ +AG+L ++ G L+ Y +++ ++G +
Sbjct: 194 KRKVVMDAYSFGIMIKGRCEAGDLMKGFRLLAMLEEFGFSLNVVIYTTLIYGCCKSGDVR 253
Query: 258 RGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
+ L MD + L+ G+ G ++E ++ +GI P+A +I
Sbjct: 254 LAKKLFCTMDRLGLVANHHSCGVLMNGFFKQGLQREGFXMYENMKPSGIVPNAYAYNCVI 313
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGL 341
+ Y A KA F MR+ G+
Sbjct: 314 SEYCNARMVDKALNVFAEMREKGI 337
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 67/181 (37%), Gaps = 35/181 (19%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
NI Y +I+G+ +I A +K G VT ++ YSK NL A +
Sbjct: 373 NIVTYNILINGFCDVGKIDTAVRLFNQLKSNGLSPTLVTYNTLIAGYSKVENLAGALDLV 432
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVR----------------------------------AG 254
+E++ P K +Y ++ A+ R G
Sbjct: 433 KEMEERCIPPSKVTYXILIDAFARLNYTKKTCEMHSLMEKSGLVSDVXHSVLIHGLCMNG 492
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPD-ARMC 313
+ LL+ + + S +Y ++ GY G+S A R+F + + + P+ A C
Sbjct: 493 NMKEASKLLKSLGELHLEPNSVIYNTMIHGYCKEGSSYRALRLFNEMVHSRMVPNVASFC 552
Query: 314 A 314
+
Sbjct: 553 S 553
>gi|326529783|dbj|BAK04838.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 490
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 105/230 (45%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y +IHG+ K+ +I A + M ++G++ D VT ++ KA + AE
Sbjct: 204 SVVSYNLVIHGFFKEGEISKACHLFHGMIQQGYVPDVVTYNSVINALCKARAMDKAEVVL 263
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ D +Y S++ Y+ G L LL+ M +Q V +++ +
Sbjct: 264 RSMVHNSVQPDAVTYNSLIHGYLILGQLKETFRLLKVMRSQGVMPSLVTCSSVMDYLCKH 323
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A+ +F + G PD + +++++ Y + G K + M + G+ P C
Sbjct: 324 GKIKEAEEMFYSRAVNGRKPDIVLYSIMLHGYAIEGSLVKMIDLCEVMARDGVVPDLPCF 383
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
++++A K ++ A+ F D+ + G + T+ + F ++G +++
Sbjct: 384 NILINAYAKYGMMDVAMLFFEDMLKQGVKPNEFTYLTVISAFCKMGRMDD 433
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 63/127 (49%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I Y+ ++HGY + + + M R G + D +++ Y+K G + +A F
Sbjct: 344 DIVLYSIMLHGYAIEGSLVKMIDLCEVMARDGVVPDLPCFNILINAYAKYGMMDVAMLFF 403
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++ G ++ +Y +++ A+ + G +D EM V + +EVY ++ GY +
Sbjct: 404 EDMLKQGVKPNEFTYLTVISAFCKMGRMDDAMEKFSEMIDMGVPLDTEVYMCMVEGYLNH 463
Query: 289 GNSEGAQ 295
G+S A+
Sbjct: 464 GDSMKAE 470
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 81/220 (36%), Gaps = 38/220 (17%)
Query: 155 QVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
+V +++ S + + Y +IHGY Q++ L M+ +G + VT + ++
Sbjct: 260 EVVLRSMVHNSVQPDAVTYNSLIHGYLILGQLKETFRLLKVMRSQGVMPSLVTCSSVMDY 319
Query: 215 YSKAGNLKMAEETFEE--------------------------IKLL---------GEPLD 239
K G +K AEE F +K++ G D
Sbjct: 320 LCKHGKIKEAEEMFYSRAVNGRKPDIVLYSIMLHGYAIEGSLVKMIDLCEVMARDGVVPD 379
Query: 240 KRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFE 299
+ ++ AY + GM+D + +M Q V Y ++ + G + A F
Sbjct: 380 LPCFNILINAYAKYGMMDVAMLFFEDMLKQGVKPNEFTYLTVISAFCKMGRMDDAMEKFS 439
Query: 300 AIQFAGITPDARMCALLINAYQMAGQSQKA---YTAFQNM 336
+ G+ D + ++ Y G S KA T +NM
Sbjct: 440 EMIDMGVPLDTEVYMCMVEGYLNHGDSMKAEEFITKMKNM 479
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 95/215 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ S + NI Y +I+G+ ++ A+ M + + D VT ++ + KA
Sbjct: 336 MIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKK 395
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ E F ++ G + +Y +++ + +A D +++ ++M + V+ Y
Sbjct: 396 VVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNT 455
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL G NG E A VFE +Q + + PD ++ AG+ + + F ++ G
Sbjct: 456 LLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKG 515
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
++P ++S K+ A I ++ DG
Sbjct: 516 VKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDG 550
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 100/238 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+LE N+ + +I + K+ ++ AE M +R + VT ++ +
Sbjct: 301 MLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDR 360
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A++ F + D +Y +++ + +A + G L R+M + + + Y
Sbjct: 361 LDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTT 420
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G+ + + AQ VF+ + G+ P+ L++ G+ +KA F+ ++K+
Sbjct: 421 LIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSK 480
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
+EP ++ K ++ + L G A T+ + F + G+ EE
Sbjct: 481 MEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEE 538
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 67/170 (39%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
N YT +IHG+ + NA+ M G + +T ++ K G L+ A
Sbjct: 413 GNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 472
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
FE ++ D +Y M +AG ++ G L + + V Y ++ G+
Sbjct: 473 FEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCK 532
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
G E A +F ++ G PD+ LI A+ G + + MR
Sbjct: 533 KGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMR 582
>gi|77552391|gb|ABA95188.1| salt-inducible protein, putative [Oryza sativa Japonica Group]
Length = 938
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 76/171 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ G K+M++ AE L R+G D + ++ Y K GNL A + +E +
Sbjct: 415 YNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMV 474
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + ++ + + GM + +++ +Y + Y NGN
Sbjct: 475 SHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMN 534
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
A ++ +++ G+TPD LI+ Y + G+ Q A F+ M KA +EP
Sbjct: 535 EAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEP 585
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 90/216 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L+ + E +I Y + G+ K + + L M +G + +T + +V + + GN
Sbjct: 578 MLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGN 637
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L AE F ++ G + Y SMV Y+ +G D +L + Q V
Sbjct: 638 LSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSK 697
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ GN +GA V + + + PD + LI+ Y G KA+ F +M + G
Sbjct: 698 LINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRG 757
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
L ++++ K +L A + + + G
Sbjct: 758 LSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGI 793
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 99/226 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I GY K ++QNA+ M + D VT ++ + K+G + + + +
Sbjct: 555 YTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMA 614
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +YG ++ + R G L EVL ++ + + +Y +++ GY ++G ++
Sbjct: 615 DQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTD 674
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +F + G D C+ LIN G Q A + M + + P + ++
Sbjct: 675 HAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLI 734
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
S + +++A + D+ + G V L + + G ++E
Sbjct: 735 SIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQE 780
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 94/223 (42%), Gaps = 20/223 (8%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+LE ++ Y+K+I Y + + A M +RG D + T+++ Y KAG
Sbjct: 718 MLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGR 777
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGML--------DRGEVLLR-------- 264
L+ A + F ++ LG D +Y ++ +++ + +R LLR
Sbjct: 778 LQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLS 837
Query: 265 EMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAG 324
M ++ Y L+ G A+ +F+ + G+TPDA LIN Y G
Sbjct: 838 SMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQG 897
Query: 325 QSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
+ KA Q M G+EP + L S + + +R ++F
Sbjct: 898 EISKAEDLLQEMIDKGIEPDE----LTFSVLNQSSLRSRKIQF 936
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 75/177 (42%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D T ++ +A + A + + E+ +G D R Y S ++ G D V+L
Sbjct: 341 DVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVIL 400
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
+E++ ++V V + Y ++ G + A+++ E G PD + LI +Y
Sbjct: 401 QEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKM 460
Query: 324 GQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGK 380
G A ++ M G+E + V+ +L K + A+ + + + G + K
Sbjct: 461 GNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDK 517
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/245 (18%), Positives = 91/245 (37%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
A++ E N + ++ + K A L K G D+V + + Y K G
Sbjct: 472 AMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNG 531
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
N+ A + E+K G DK Y ++ Y G + + + EM + Y
Sbjct: 532 NMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYN 591
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L G+ +G + + + G+ P++ + I + G +A F + +
Sbjct: 592 ILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEK 651
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEV 399
G++ + + ++ + A + + R G +V + L R+G V+
Sbjct: 652 GIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGA 711
Query: 400 EHVLR 404
+V +
Sbjct: 712 SNVCK 716
>gi|302823876|ref|XP_002993586.1| hypothetical protein SELMODRAFT_137265 [Selaginella moellendorffii]
gi|300138598|gb|EFJ05361.1| hypothetical protein SELMODRAFT_137265 [Selaginella moellendorffii]
Length = 451
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 97/222 (43%), Gaps = 1/222 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E + + + I+ Y KK ++ E L M G D VT V++ Y +AG+
Sbjct: 198 LRREDLKPDAYTFNGIMDAYAKKGLYRDMEYKLKEMSEHGVRPDLVTFNVLIDAYGRAGD 257
Query: 221 LKMAEETFEE-IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
E T++ + L G ++ SM+ +Y ++ L + E +L MD + +
Sbjct: 258 FVKMERTYKSLVNLSGCKPSATTFNSMLASYGQSRELGKMEQVLVRMDMAGLGPDLTTFN 317
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ Y G + ++ F+ + + + P +L+ AY G +A F N K
Sbjct: 318 TLMSSYGRAGELDTMRKCFDKMVRSPVKPQVSTLDVLLRAYAEHGLVDEAEALFINASKL 377
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKE 381
++P+ ++ A +E QL++ + +E+ G G+E
Sbjct: 378 DIKPAVSSYLILFKAYGEERQLDKMTVLMSKMEQSGVESGQE 419
>gi|255582603|ref|XP_002532083.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528243|gb|EEF30297.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 841
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 99/220 (45%), Gaps = 1/220 (0%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
+++ Y ++I K +++ + ++ G D T ++ + G A E
Sbjct: 251 SSVYAYNRVIQHLAKAEKLELSFCCFKKVQDSGCKIDTQTYNALITSFLNKGLPYKAFEI 310
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
+E ++ LD +Y M+ + ++G LD L +EM +++ ++ +L+
Sbjct: 311 YESMQAAQCSLDASTYELMIPSLAKSGRLDVAFKLFQEMKERKIRPSFGIFSSLVDSMGK 370
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
+G + + +++ +Q G+ A M LI +Y AG+ A + M+KAG P+
Sbjct: 371 SGRLDTSMKIYMEMQGFGLRSSASMYVSLIESYTKAGKLDTALRLWDEMKKAGFRPNYGL 430
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFM-VGKEASCTL 386
LI+ + K +L+ A D+++ GF+ SC L
Sbjct: 431 YTLIIESHAKSGKLDIATSIFKDMDKAGFLPTPSTYSCLL 470
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 92/219 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I K ++ A MK R + +V K+G L + + + E++
Sbjct: 326 YELMIPSLAKSGRLDVAFKLFQEMKERKIRPSFGIFSSLVDSMGKSGRLDTSMKIYMEMQ 385
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G Y S++ +Y +AG LD L EM +Y ++ ++ +G +
Sbjct: 386 GFGLRSSASMYVSLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIIESHAKSGKLD 445
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +F+ + AG P + L+ + +GQ A + +M AGL+P +L
Sbjct: 446 IATSIFKDMDKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLKPGLSTYTALL 505
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFK 391
+ + ++ A + L++++ GF V AS L + K
Sbjct: 506 TLLASKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYIK 544
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 30/174 (17%), Positives = 78/174 (44%), Gaps = 3/174 (1%)
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI 301
+Y ++ +A L+ +++ + ++ Y AL+ + G A ++E++
Sbjct: 255 AYNRVIQHLAKAEKLELSFCCFKKVQDSGCKIDTQTYNALITSFLNKGLPYKAFEIYESM 314
Query: 302 QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQL 361
Q A + DA L+I + +G+ A+ FQ M++ + PS + ++ + K +L
Sbjct: 315 QAAQCSLDASTYELMIPSLAKSGRLDVAFKLFQEMKERKIRPSFGIFSSLVDSMGKSGRL 374
Query: 362 NRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV---LREYGLRETY 412
+ +++ ++++ G +L + + G ++ + +++ G R Y
Sbjct: 375 DTSMKIYMEMQGFGLRSSASMYVSLIESYTKAGKLDTALRLWDEMKKAGFRPNY 428
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 100/244 (40%), Gaps = 1/244 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y +I K ++Q+A N M +G D T ++ K + A +
Sbjct: 458 NAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLY 517
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+++ L G + +Y +++ A++R G + L+ +M + + Y L++
Sbjct: 518 QDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRA 577
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
GN E +FE + G+ P+ C +LIN G Q A ++M GL P
Sbjct: 578 GNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTY 637
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGL 408
+++ K + AL L+ +G TL +W + G+ ++ H+L G+
Sbjct: 638 NSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDA-HLLLSRGV 696
Query: 409 RETY 412
+
Sbjct: 697 DSGF 700
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 2/211 (0%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E N+ YT +I + K+ +++ A N L M +G + V ++ K ++ A
Sbjct: 421 EPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALN 480
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
F ++ G D ++ S++ + + L ++M + V + Y L+ +
Sbjct: 481 MFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFL 540
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD- 345
G + A ++ + F G D LI A AG +K F++M GL P++
Sbjct: 541 RRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNI 600
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGF 376
C LI C N + ALEFL D+ G
Sbjct: 601 SCNILINGLCRTGN-IQHALEFLRDMIHRGL 630
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 85/198 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L E AN Y +IH + ++ +Q A + M RG D +T ++ +AGN
Sbjct: 520 MLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGN 579
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ FE++ G + S ++ R G + LR+M + + Y +
Sbjct: 580 IEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNS 639
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G G ++ A +F+ +Q GI PDA LI+ + G A+ +G
Sbjct: 640 LINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSG 699
Query: 341 LEPSDKCVALILSACEKE 358
P++ +++S KE
Sbjct: 700 FIPNEVTWYILVSNFIKE 717
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 86/209 (41%), Gaps = 7/209 (3%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ + IHG K ++I A + M RGF + T V++ + G + A
Sbjct: 286 DVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLL 345
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV--YKALLRGYS 286
++ P + + +++ YV G LD + ++ E V G ++ Y L+ G
Sbjct: 346 NKVP---NP-NVVLFNTLINGYVSRGRLDEAKAVMHE-SMLSVGCGPDIFTYNTLILGLC 400
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G A+ + +Q G P+ +LI+ + G+ ++A M GL +
Sbjct: 401 KKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAV 460
Query: 347 CVALILSACEKENQLNRALEFLIDLERDG 375
++SA K+ ++ AL D+ G
Sbjct: 461 GYNCLISALCKDEKVQDALNMFGDMSSKG 489
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 41/212 (19%), Positives = 89/212 (41%), Gaps = 1/212 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLL-AMKRRGFICDQVTLTVMVVMYSKAG 219
LL + N+ + +I+GY + ++ A+ + +M G D T +++ K G
Sbjct: 344 LLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKG 403
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
L A E E+++ G + +Y ++ + + G L+ +L EM + + + + Y
Sbjct: 404 YLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYN 463
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ + + A +F + G PD LI + ++A +Q+M
Sbjct: 464 CLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLE 523
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDL 371
G+ + ++ A + + AL+ + D+
Sbjct: 524 GVIANTITYNTLIHAFLRRGAMQEALKLVNDM 555
>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 889
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 102/246 (41%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
L E F N Y +++GY K +I A M+++G D +T ++V + K G
Sbjct: 361 GLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYG 420
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ + ++I +LG D+ + V AG LD L +M + + +
Sbjct: 421 REEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFN 480
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
+++ YS G + A ++ + G+TP C+ L+ + G+ Q+A M +
Sbjct: 481 SVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEK 540
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEV 399
GL ++ ++L K + A ++ER G A + G+VEE
Sbjct: 541 GLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEA 600
Query: 400 EHVLRE 405
+V E
Sbjct: 601 YNVFLE 606
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 101/266 (37%), Gaps = 36/266 (13%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E N Y +I+ + + +A M RG VT ++ + K GN+ A +
Sbjct: 298 EPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARK 357
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
F+ +K +G + Y +++ YV+ +D+ +L EM + + + L+ G+
Sbjct: 358 LFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHY 417
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCAL------------------------------- 315
G E R+ + I G+ PD + +
Sbjct: 418 KYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSII 477
Query: 316 ----LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDL 371
+I AY AG KA+ A++ M GL PS + +L +L A E + +
Sbjct: 478 AFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQM 537
Query: 372 ERDGFMVGKEA-SCTLAAWFKRLGVV 396
G V A + L +FKR VV
Sbjct: 538 IEKGLSVNNMAFTVLLDKFFKRGDVV 563
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 87/217 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E+ N +T ++ + K+ + A++ M+RRG D V + + SK G
Sbjct: 537 MIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGL 596
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ A F E+ G + +Y S++ + + G L+ L + M + +
Sbjct: 597 VEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNM 656
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G G A VF + G++PD LIN Y A A M +G
Sbjct: 657 IIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASG 716
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
P + + ++NRA+ L +L G +
Sbjct: 717 SNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIV 753
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 82/186 (44%), Gaps = 6/186 (3%)
Query: 185 QIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLL---GEPLDKR 241
++ A L+ M +G + ++ YS+AG + ++ FE KL+ G
Sbjct: 456 RLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAG---LEDKAFEAYKLMVHFGLTPSPS 512
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI 301
+ S++M G L L+ +M + + V + + LL + G+ GAQ ++ +
Sbjct: 513 TCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEM 572
Query: 302 QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQL 361
+ GI PD + I+ G ++AY F M + GL P++ ++ K +L
Sbjct: 573 ERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKL 632
Query: 362 NRALEF 367
N AL+
Sbjct: 633 NEALKL 638
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/170 (18%), Positives = 77/170 (45%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKL 233
+ ++ G ++Q A + M +G + + TV++ + K G++ A+ + E++
Sbjct: 515 SSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMER 574
Query: 234 LGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEG 293
G D ++ + + + G+++ + EM + + + Y +L+ G+ G
Sbjct: 575 RGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNE 634
Query: 294 AQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
A ++ + ++ G+ PD ++I G+ + A F +M + GL P
Sbjct: 635 ALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSP 684
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 48/248 (19%), Positives = 95/248 (38%), Gaps = 6/248 (2%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
++ I G K+ ++ A N L M R+G I + ++ + K G L A + + ++
Sbjct: 584 FSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMR 643
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D + ++ + G + + +M + Y L+ GY +
Sbjct: 644 HRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMV 703
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + +G PD + I+ + + + +A + AG+ P+ +L
Sbjct: 704 NADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSML 763
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEV---EHVLRE--YG 407
+ + L+RA+ L + F+ + L + F + G+ E H L E Y
Sbjct: 764 NGVCSD-ILDRAMILTARLLKMAFVPNVVTANLLLSQFYKQGMPERTLMWGHKLSEIPYA 822
Query: 408 LRETYSKI 415
E KI
Sbjct: 823 FDEITYKI 830
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 102/245 (41%), Gaps = 7/245 (2%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y II KKM+I+ AE M +G VT ++ KA + A E E++
Sbjct: 480 YNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMV 539
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +Y S++ Y + G + + +L M A + Y L+ G G ++
Sbjct: 540 KEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQ 599
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A ++ ++ GI P + +I + + A F+ M + G EP D I+
Sbjct: 600 VALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVG-EPPDALTYKIV 658
Query: 353 --SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG----VVEEVEHVLREY 406
S C + A +FL+++ GFM + LA LG ++ +E ++ +
Sbjct: 659 FRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLGMDDYLISAIELIIEKA 718
Query: 407 GLRET 411
RE+
Sbjct: 719 KFRES 723
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 85/203 (41%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I ++ NA + L M+ G VT ++ K ++ AEE F+++
Sbjct: 445 YNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMD 504
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G ++ +++ +A +D L+ +M + + + Y ++L Y GN +
Sbjct: 505 AQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIK 564
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + E + G D LIN AG++Q A + MR G+ P+ K ++
Sbjct: 565 KAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVI 624
Query: 353 SACEKENQLNRALEFLIDLERDG 375
+ + N L AL ++ G
Sbjct: 625 QSLFRRNNLRDALNLFREMTEVG 647
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 86/200 (43%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
+I+GY K ++++A + GF DQVT V + G++ A + + + G
Sbjct: 273 LINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEG 332
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
D +Y +++ + G LD + ++ +M + + + L+ S E A
Sbjct: 333 HDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEAL 392
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
+ + G++PD +LINA G F+ M+ +G P + +++
Sbjct: 393 DLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHL 452
Query: 356 EKENQLNRALEFLIDLERDG 375
+L AL+ L ++E +G
Sbjct: 453 CSMGKLGNALDLLNEMESNG 472
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 112/291 (38%), Gaps = 38/291 (13%)
Query: 154 LQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVV 213
L+V +L +L+E + ++ Y +I+ K ++ A+ + M RG + D T ++V
Sbjct: 322 LKVMDL-MLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIV 380
Query: 214 MYS-----------------------------------KAGNLKMAEETFEEIKLLGEPL 238
S K G+ + FEE+K G
Sbjct: 381 ALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTP 440
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
D+ +Y ++ G L LL EM++ + Y ++ E A+ VF
Sbjct: 441 DEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVF 500
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
+ + GI+ A LI+ A + A + M K GL+P++ IL+ K+
Sbjct: 501 DQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQ 560
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLR 409
+ +A + L + +GF + TL + G + +LR G+R
Sbjct: 561 GNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLR--GMR 609
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 69/169 (40%)
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G D V ++ + + LK+ E + E+ G D + +++ A RA +
Sbjct: 157 GVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTA 216
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
++L EM + V + L++G+ G+ E A RV + AG +P +LIN
Sbjct: 217 VLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLING 276
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFL 368
Y G+ + A Q G EP + + ++ AL+ +
Sbjct: 277 YCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVM 325
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 84/215 (39%)
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL 221
+ + FE + Y +HG + + +A + M + G D T ++ SK G L
Sbjct: 294 IADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGEL 353
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
A+ ++ G D ++ ++++A L+ L RE+ + + + L
Sbjct: 354 DEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNIL 413
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+ G+ R+FE ++ +G TPD +LI+ G+ A M G
Sbjct: 414 INALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGC 473
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
S I+ A K+ ++ A E ++ G
Sbjct: 474 PRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGI 508
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 57/128 (44%), Gaps = 4/128 (3%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++E + N Y I+ Y K+ I+ A + L M GF D VT ++ KAG
Sbjct: 538 MVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGR 597
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM----DAQEVYVGSE 276
++A + +++ G ++Y ++ + R L L REM + +
Sbjct: 598 TQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKI 657
Query: 277 VYKALLRG 284
V+++L RG
Sbjct: 658 VFRSLCRG 665
>gi|255661186|gb|ACU25762.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 426
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 97/209 (46%), Gaps = 31/209 (14%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ KAG L A F
Sbjct: 218 NVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKAGKLDRAAMLF 277
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA-------------------- 268
++++ G +D+ Y +M++AY +AG++ + LL E+ +
Sbjct: 278 QKLRSSGVEIDQVLYQTMIVAYEKAGLVAHAKRLLHELKSPDNIPRDTAIHILAGAGRIE 337
Query: 269 QEVYVGSE-----------VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
+ YV + V++ ++ +S VF+ ++ G PD+ + AL++
Sbjct: 338 EATYVFRQAIDAGEVRDITVFERMIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVL 397
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
NAY + KA + M++ G SD+
Sbjct: 398 NAYGKLHEFDKANGVYMEMQEVGCVFSDE 426
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 102/237 (43%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N YT ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 113 NTASYTTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 172
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 173 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKT 232
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + AG+ +A FQ +R +G+E
Sbjct: 233 LEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLY 292
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A EK + A L +L+ + A LA G +EE +V R+
Sbjct: 293 QTMIVAYEKAGLVAHAKRLLHELKSPDNIPRDTAIHILAG----AGRIEEATYVFRQ 345
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + M+ G + + + T ++ MY + A
Sbjct: 75 FTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYTTLLTMYVENKKFLEAL 134
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 135 SVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 194
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + ++ Y + +KA Q M+ G+E
Sbjct: 195 ---GDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIE 251
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ +++ G+V + +
Sbjct: 252 PNSITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYEKAGLVAHAKRL 311
Query: 403 LRE 405
L E
Sbjct: 312 LHE 314
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/246 (19%), Positives = 98/246 (39%), Gaps = 31/246 (12%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E N+ Y ++ YG A + M+R+ + + VT M+++Y K + A
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANN 240
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
+E++ G + +Y +++ + +AG LDR +L +++ + V + +Y+ ++ Y
Sbjct: 241 LIQEMQNRGIEPNSITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYE 300
Query: 287 MNGNSEGAQR-------------------------------VFEAIQFAGITPDARMCAL 315
G A+R VF AG D +
Sbjct: 301 KAGLVAHAKRLLHELKSPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVRDITVFER 360
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+I+ + + F MR G P +AL+L+A K ++ ++A ++++ G
Sbjct: 361 MIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANGVYMEMQEVG 420
Query: 376 FMVGKE 381
+ E
Sbjct: 421 CVFSDE 426
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ A + L M++ D V + ++ + K + A F +K
Sbjct: 12 YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 71
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +M+ + +A + L+ EM V + Y LL Y N
Sbjct: 72 RSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYTTLLTMYVENKKFL 131
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF ++ D C ++I+ Y G +++A F MRK G+EP+
Sbjct: 132 EALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/172 (18%), Positives = 75/172 (43%), Gaps = 2/172 (1%)
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
D+ +Y +++ + + G+ D L++M+ V +Y L+ + A +F
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
++ +G TPD +IN + A ++A + MR AG+ P+ +L+ +
Sbjct: 68 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYTTLLTMYVEN 127
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRE 410
+ AL ++ ++ + + +LG+ +E + + +G+R+
Sbjct: 128 KKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF--WGMRK 177
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 126/287 (43%), Gaps = 9/287 (3%)
Query: 118 GNLSDLLAAWVRFM----KPRRADWLAVLKQLKLMEHPLYLQVAEL--ALLEESFEANIR 171
G D +A + R + +P + VL M P + +V EL ++ E +
Sbjct: 186 GRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVP-WKEVVELVASMKEHGVAPDRY 244
Query: 172 DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEI 231
Y +I ++ + A MK GF D+VT ++ +Y KA A E +E+
Sbjct: 245 TYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEM 304
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
+ +G P +Y S++ +YV+ G+L++ L +EM+ + + Y L+ G G
Sbjct: 305 ERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKI 364
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALI 351
+ A ++ + G P+ LI + + G+ + F +R AG P D
Sbjct: 365 DAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVP-DIVTWNT 423
Query: 352 LSACEKENQLNRALEFLI-DLERDGFMVGKEASCTLAAWFKRLGVVE 397
L A +N L+ + + ++++ G++ ++ +L + + R G+ +
Sbjct: 424 LLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFD 470
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 102/235 (43%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I +G + + ++ GF+ D VT ++ ++ + G F
Sbjct: 382 NLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVF 441
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+K G ++ +Y S++ +Y R G+ D + + M +Y Y A+L +
Sbjct: 442 KEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARG 501
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G E A+++F ++ PD + L++AY A + K ++ +EP + V
Sbjct: 502 GRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLV 561
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
++ K N L A + ++L + + + + + + +V +VE +L
Sbjct: 562 KTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKIL 616
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 76/161 (47%)
Query: 208 LTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMD 267
+ +V++ SK NL AE+ F E++ LD +MV Y + M+ + E +L M
Sbjct: 561 VKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMK 620
Query: 268 AQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQ 327
+ + + Y +L+ YS G+ E + + I+ +G+ PD +I AY GQ +
Sbjct: 621 ESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMK 680
Query: 328 KAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFL 368
+A F M+ +GL+P + + + + A+E +
Sbjct: 681 EASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELV 721
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 81/204 (39%), Gaps = 6/204 (2%)
Query: 137 DWLAVLKQLKLMEHPLY-LQVAELALLE---ESFEANIRDYTKIIHGYGKKMQIQNAENT 192
+WL +K L L+ + L AE A LE + +I ++ YGK ++ E
Sbjct: 558 NWL--VKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKI 615
Query: 193 LLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVR 252
L MK T ++ MYS+ G+ + E EIK G D+ SY +++ AY R
Sbjct: 616 LSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGR 675
Query: 253 AGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARM 312
G + L EM + Y ++ Y N E A + + G P+ R
Sbjct: 676 KGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERT 735
Query: 313 CALLINAYQMAGQSQKAYTAFQNM 336
++ Y G+ A N+
Sbjct: 736 YNSIVEGYCRNGKLTDAKIFVSNL 759
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 82/190 (43%)
Query: 182 KKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKR 241
K + AE L ++++ D L MV +Y K ++ E+ +K L
Sbjct: 570 KVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAA 629
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI 301
+Y S++ Y R G ++ E +L E+ + V Y ++ Y G + A R+F +
Sbjct: 630 TYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEM 689
Query: 302 QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQL 361
+ +G+ PD + + +Y ++A + M G +P+++ I+ + +L
Sbjct: 690 KCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKL 749
Query: 362 NRALEFLIDL 371
A F+ +L
Sbjct: 750 TDAKIFVSNL 759
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/200 (19%), Positives = 86/200 (43%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ + ++ YT +I G + +I A M R G + T ++ M+ G
Sbjct: 342 KGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPE 401
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
F+E++ G D ++ +++ + + G+ + +EM + Y +L+
Sbjct: 402 MMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLIS 461
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
YS G + A ++++ + AGI PD +++A G+ ++A F M + +P
Sbjct: 462 SYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKP 521
Query: 344 SDKCVALILSACEKENQLNR 363
+ + +L A +L++
Sbjct: 522 DEYSYSSLLHAYANAKRLDK 541
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 105/282 (37%), Gaps = 36/282 (12%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
ALL+ + + YT ++ + + + ++A M G VT V++ +YSK
Sbjct: 162 ALLDAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMA 221
Query: 220 N------------------------------------LKMAEETFEEIKLLGEPLDKRSY 243
K A + F+E+K G DK ++
Sbjct: 222 VPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTF 281
Query: 244 GSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQF 303
S++ Y +A D +++EM+ Y +L+ Y +G E A + + ++
Sbjct: 282 NSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEV 341
Query: 304 AGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNR 363
GI PD LI+ AG+ A + M + G +P+ ++ +
Sbjct: 342 KGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPE 401
Query: 364 ALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ +L GF+ TL A F + G+ EV V +E
Sbjct: 402 MMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKE 443
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 86/207 (41%), Gaps = 1/207 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y +I Y K ++ A M+ +G D VT T ++ +AG + A +
Sbjct: 312 SVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEY 371
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+ G + +Y +++ + G + E+ + + LL + N
Sbjct: 372 DEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQN 431
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G VF+ ++ AG P+ LI++Y G A ++ M +AG+ P
Sbjct: 432 GLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTY 491
Query: 349 ALILSACEKENQLNRALEFLIDL-ERD 374
+LSA + + +A + ++ ERD
Sbjct: 492 NAVLSALARGGRWEQAEKLFAEMEERD 518
>gi|255660884|gb|ACU25611.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 484
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 112/243 (46%), Gaps = 6/243 (2%)
Query: 141 VLKQLKLMEHPL-YLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR 199
VL K EH L + + E + L FE N + KII G+ ++ +A LL M ++
Sbjct: 18 VLHSSKTSEHALQFFRWVERSNL---FEHNRETHLKIIEILGRASKLNHARCILLDMPKK 74
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G D+ +M+ Y K ++ + + F++++ LG +SY ++ +R G
Sbjct: 75 GLEWDEDMWVMMIDSYGKEXIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMA 134
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
+ +M ++ + + ++ G+ ++G E A R FE ++ I+PD +IN
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMING 194
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
Y + ++A F M+ +EP+ ++ +Q++ AL + +++ GF +
Sbjct: 195 YYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK--GFGIK 252
Query: 380 KEA 382
A
Sbjct: 253 PNA 255
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 85/202 (42%), Gaps = 8/202 (3%)
Query: 163 EESFEANIRDYT---KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
E E I+ Y K+I G+ M + N +L+ G + T VM+ + +G
Sbjct: 108 ELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLS---EGIEPTRHTFNVMIWGFFLSG 164
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ A FE++K D +Y +M+ Y R ++ E EM + + Y
Sbjct: 165 KVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYT 224
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L++GY + A R+ E ++ GI P+A + L+ A +A + M
Sbjct: 225 TLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEXMSEARVILKEMMDK 284
Query: 340 GLEPSDKCV--ALILSACEKEN 359
L P+D + LI S C+ N
Sbjct: 285 YLAPTDNSIFMRLISSHCKSGN 306
>gi|410110149|gb|AFV61154.1| pentatricopeptide repeat-containing protein 123, partial
[Xeroaloysia ovatifolia]
Length = 431
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 97/210 (46%), Gaps = 31/210 (14%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ KAG L A F
Sbjct: 221 NVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKAGKLDRAAMLF 280
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA-------------------- 268
++++ G +D+ Y +M++AY +AG++ + LL E+ +
Sbjct: 281 QKLRSSGVEIDQVLYQTMIVAYEKAGLVAHAKRLLHELKSPDNIPRDTAIHILAGAGRIE 340
Query: 269 QEVYVGSE-----------VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
+ YV + V++ ++ +S VF+ ++ G PD+ + AL++
Sbjct: 341 EATYVFRQAIDAGEVRDITVFERMIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVL 400
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
NAY + KA + M++ G SD+
Sbjct: 401 NAYGKLHEFDKANGVYMEMQEVGCVFSDEV 430
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 102/237 (43%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N YT ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 116 NTASYTTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 175
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 176 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKT 235
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + AG+ +A FQ +R +G+E
Sbjct: 236 LEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLY 295
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A EK + A L +L+ + A LA G +EE +V R+
Sbjct: 296 QTMIVAYEKAGLVAHAKRLLHELKSPDNIPRDTAIHILAG----AGRIEEATYVFRQ 348
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + M+ G + + + T ++ MY + A
Sbjct: 78 FTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYTTLLTMYVENKKFLEAL 137
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 138 SVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 197
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + ++ Y + +KA Q M+ G+E
Sbjct: 198 ---GDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIE 254
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ +++ G+V + +
Sbjct: 255 PNSITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYEKAGLVAHAKRL 314
Query: 403 LRE 405
L E
Sbjct: 315 LHE 317
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/247 (19%), Positives = 98/247 (39%), Gaps = 31/247 (12%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E N+ Y ++ YG A + M+R+ + + VT M+++Y K + A
Sbjct: 184 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANN 243
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
+E++ G + +Y +++ + +AG LDR +L +++ + V + +Y+ ++ Y
Sbjct: 244 LIQEMQNRGIEPNSITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYE 303
Query: 287 MNGNSEGAQR-------------------------------VFEAIQFAGITPDARMCAL 315
G A+R VF AG D +
Sbjct: 304 KAGLVAHAKRLLHELKSPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVRDITVFER 363
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+I+ + + F MR G P +AL+L+A K ++ ++A ++++ G
Sbjct: 364 MIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANGVYMEMQEVG 423
Query: 376 FMVGKEA 382
+ E
Sbjct: 424 CVFSDEV 430
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ A + L M++ D V + ++ + K + A F +K
Sbjct: 15 YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 74
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +M+ + +A + L+ EM V + Y LL Y N
Sbjct: 75 RSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYTTLLTMYVENKKFL 134
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF ++ D C ++I+ Y G +++A F MRK G+EP+
Sbjct: 135 EALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 186
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/172 (18%), Positives = 75/172 (43%), Gaps = 2/172 (1%)
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
D+ +Y +++ + + G+ D L++M+ V +Y L+ + A +F
Sbjct: 11 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 70
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
++ +G TPD +IN + A ++A + MR AG+ P+ +L+ +
Sbjct: 71 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYTTLLTMYVEN 130
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRE 410
+ AL ++ ++ + + +LG+ +E + + +G+R+
Sbjct: 131 KKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF--WGMRK 180
>gi|410110117|gb|AFV61138.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
hermannioides]
Length = 382
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 105/216 (48%), Gaps = 12/216 (5%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 174 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKXGKLDR 233
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ + +M++AY RAG++ + LL E+ + + + +L
Sbjct: 234 AAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDTAIHILA 292
Query: 284 GYSMNGNSEGAQRVFEAIQFAG----ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
G G E A VF AG IT RM LL + Y+ + F MR
Sbjct: 293 G---AGRIEEATYVFRQAIDAGEVKXITVFERMIHLL-SKYK---KYSNVVEVFDKMRGL 345
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
G P +A++L+A K + ++A + ++++ G
Sbjct: 346 GYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQEVG 381
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 102/237 (43%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 74 NTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 133
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 134 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 193
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G+E
Sbjct: 194 LEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKXGKLDRAAMLFQKLRSSGVEIDQILF 253
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE +V R+
Sbjct: 254 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGA----GRIEEATYVFRQ 306
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 102/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + MK G + + + + ++ MY + A
Sbjct: 36 FTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEAL 95
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 96 SVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 155
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + ++ Y + +KA Q M+ G+E
Sbjct: 156 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIE 212
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 213 PNSITYSTIISIWGKXGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRL 272
Query: 403 LRE 405
L E
Sbjct: 273 LHE 275
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 60/141 (42%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D V + ++ + K + A F +K G D +Y +M+ + +A + L+
Sbjct: 4 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 63
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
EM V + Y LL Y N A VF ++ D C ++I+ Y
Sbjct: 64 SEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 123
Query: 324 GQSQKAYTAFQNMRKAGLEPS 344
G +++A F MRK G+EP+
Sbjct: 124 GMAKEADKLFWGMRKMGIEPN 144
>gi|297830178|ref|XP_002882971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328811|gb|EFH59230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 642
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 78/182 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+ GK + + A +K VM+ + K G L A + F E+K
Sbjct: 447 YCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMK 506
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +++ V+AGM++ LLR+M+ + +L G++ G
Sbjct: 507 NQGSGPDVYAYNALMSGMVKAGMVNEANSLLRKMEENGCTADINSHNIILNGFARTGVPR 566
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +FE ++ GI PD L+ + AG ++A + M+ G E + IL
Sbjct: 567 RAIEMFETMKHCGIKPDGVTYNTLLGCFAHAGMFEEAARLMREMKDKGFEYDAITYSSIL 626
Query: 353 SA 354
A
Sbjct: 627 DA 628
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 80/204 (39%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I GY K +++ A L M +GF ++ KA + A E F+E+K
Sbjct: 412 YSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELK 471
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ R Y M+ + + G L L EM Q Y AL+ G G
Sbjct: 472 ENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMVN 531
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + ++ G T D +++N + G ++A F+ M+ G++P +L
Sbjct: 532 EANSLLRKMEENGCTADINSHNIILNGFARTGVPRRAIEMFETMKHCGIKPDGVTYNTLL 591
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
A + +++ GF
Sbjct: 592 GCFAHAGMFEEAARLMREMKDKGF 615
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 74/171 (43%), Gaps = 1/171 (0%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKL 233
++++ G+ + A + K R T +++M + G + E + E+
Sbjct: 166 SELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCN 225
Query: 234 LGEPL-DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G+ D +Y +++ +Y + G D L EM + ++Y LL Y G E
Sbjct: 226 EGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVE 285
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
A +FE ++ AG +P LI AG+ ++AY ++NM GL P
Sbjct: 286 KALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTDGLTP 336
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 84/210 (40%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
MK G + T ++++ Y K ++ A EE+ G P +Y S++ A +A
Sbjct: 400 MKADGVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKR 459
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
+ L +E+ V S VY +++ + G A +F ++ G PD
Sbjct: 460 YEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNA 519
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
L++ AG +A + + M + G +IL+ + RA+E ++ G
Sbjct: 520 LMSGMVKAGMVNEANSLLRKMEENGCTADINSHNIILNGFARTGVPRRAIEMFETMKHCG 579
Query: 376 FMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
TL F G+ EE ++RE
Sbjct: 580 IKPDGVTYNTLLGCFAHAGMFEEAARLMRE 609
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 77/167 (46%), Gaps = 1/167 (0%)
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREM-DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEA 300
+Y S+++ ++ G ++ + EM + + + + Y AL+ Y G ++ A R+F+
Sbjct: 199 TYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDE 258
Query: 301 IQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQ 360
++ + P ++ L+ Y G+ +KA F+ M++AG P+ ++ K +
Sbjct: 259 MKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGR 318
Query: 361 LNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYG 407
+ A + ++ DG L ++G +EE+ +V E G
Sbjct: 319 VEEAYDLYKNMLTDGLTPDVVFLNNLMNILGKVGRLEELTNVFNEMG 365
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 71/345 (20%), Positives = 135/345 (39%), Gaps = 28/345 (8%)
Query: 76 TWIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRFMKPRR 135
T++ +GP + E +A+ + KM + LS A R KP
Sbjct: 156 TYVSVGPVVLSELVKALGR--AKMVSKA----------------LSVFYQAKGRKCKPTS 197
Query: 136 ADWLAVLKQLKLMEHPLYLQV----AELALLEESFEANIRDYTKIIHGYGKKMQIQNAEN 191
+ + +V+ L LM+ + +V E+ + F I Y+ +I Y K + +A
Sbjct: 198 STYNSVI--LMLMQEGQHEKVHEVYTEMCNEGDCFPDTIT-YSALISSYEKLGRNDSAIR 254
Query: 192 TLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYV 251
MK + T ++ +Y K G ++ A + FEE+K G +Y ++
Sbjct: 255 LFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLG 314
Query: 252 RAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDAR 311
+AG ++ L + M + L+ G E VF + TP
Sbjct: 315 KAGRVEEAYDLYKNMLTDGLTPDVVFLNNLMNILGKVGRLEELTNVFNEMGTWRCTPTVV 374
Query: 312 MCALLINA-YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLID 370
+I A ++ + + F M+ G+ PS+ ++++ K N++ +AL L +
Sbjct: 375 SYNTVIKALFESKAPVSEVSSWFDKMKADGVSPSEFTYSILIDGYCKTNRVEKALLLLEE 434
Query: 371 LERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRETYSKI 415
++ GF A C+L + E + +E L+E + +
Sbjct: 435 MDEKGFPPCPAAYCSLINALGKAKRYEAANELFKE--LKENFGNV 477
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 100/244 (40%), Gaps = 1/244 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y +I K ++Q+A N M +G D T ++ K + A +
Sbjct: 476 NAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLY 535
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+++ L G + +Y +++ A++R G + L+ +M + + Y L++
Sbjct: 536 QDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRA 595
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
GN E +FE + G+ P+ C +LIN G Q A ++M GL P
Sbjct: 596 GNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTY 655
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGL 408
+++ K + AL L+ +G TL +W + G+ ++ H+L G+
Sbjct: 656 NSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDA-HLLLSRGV 714
Query: 409 RETY 412
+
Sbjct: 715 DSGF 718
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 89/210 (42%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E N+ YT +I + K+ +++ A N L M +G + V ++ K ++ A
Sbjct: 439 EPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALN 498
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
F ++ G D ++ S++ + + L ++M + V + Y L+ +
Sbjct: 499 MFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFL 558
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G + A ++ + F G D LI A AG +K F++M GL P++
Sbjct: 559 RRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNI 618
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGF 376
++++ + + ALEFL D+ G
Sbjct: 619 SCNILINGLCRTGNIQHALEFLRDMIHRGL 648
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 85/198 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L E AN Y +IH + ++ +Q A + M RG D +T ++ +AGN
Sbjct: 538 MLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGN 597
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ FE++ G + S ++ R G + LR+M + + Y +
Sbjct: 598 IEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNS 657
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G G ++ A +F+ +Q GI PDA LI+ + G A+ +G
Sbjct: 658 LINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSG 717
Query: 341 LEPSDKCVALILSACEKE 358
P++ +++S KE
Sbjct: 718 FIPNEVTWYILVSNFIKE 735
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 86/209 (41%), Gaps = 7/209 (3%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ + IHG K ++I A + M RGF + T V++ + G + A
Sbjct: 304 DVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLL 363
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV--YKALLRGYS 286
++ P + + +++ YV G LD + ++ E V G ++ Y L+ G
Sbjct: 364 NKVP---NP-NVVLFNTLINGYVSRGRLDEAKAVMHE-SMLSVGCGPDIFTYNTLILGLC 418
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G A+ + +Q G P+ +LI+ + G+ ++A M GL +
Sbjct: 419 KKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAV 478
Query: 347 CVALILSACEKENQLNRALEFLIDLERDG 375
++SA K+ ++ AL D+ G
Sbjct: 479 GYNCLISALCKDEKVQDALNMFGDMSSKG 507
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 41/212 (19%), Positives = 89/212 (41%), Gaps = 1/212 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLL-AMKRRGFICDQVTLTVMVVMYSKAG 219
LL + N+ + +I+GY + ++ A+ + +M G D T +++ K G
Sbjct: 362 LLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKG 421
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
L A E E+++ G + +Y ++ + + G L+ +L EM + + + + Y
Sbjct: 422 YLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYN 481
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ + + A +F + G PD LI + ++A +Q+M
Sbjct: 482 CLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLE 541
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDL 371
G+ + ++ A + + AL+ + D+
Sbjct: 542 GVIANTITYNTLIHAFLRRGAMQEALKLVNDM 573
>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 783
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 101/238 (42%), Gaps = 16/238 (6%)
Query: 153 YLQVAELALLEESFE---ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLT 209
YL AE LE S N Y+ +I G K I A++ M++ G + VT
Sbjct: 388 YLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFN 447
Query: 210 VMVVMYSKAGNLKMAEETFEEIKLLGEP-------------LDKRSYGSMVMAYVRAGML 256
++ KA L+ A F +++++ +P D S M+ +GM+
Sbjct: 448 SLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMI 507
Query: 257 DRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALL 316
+ LL ++ V Y L+ G+ GN GA ++F+ +Q G PD+ L
Sbjct: 508 LKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTL 567
Query: 317 INAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
I+ AG+++ A F+ M K G P I++ +EN ++ AL + RD
Sbjct: 568 IDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRD 625
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 104/246 (42%), Gaps = 2/246 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L+ + ++ Y +IHG K + Q+A M RG + +Q+ ++++ +A
Sbjct: 189 MLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKK 248
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A+ F +++ G D +Y ++ + ++G LD LL+ + +G Y
Sbjct: 249 IFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGC 308
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G E A ++ + I PD + ++I G+ +A T M + G
Sbjct: 309 LINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERG 368
Query: 341 LEPSDKCV-ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEV 399
L P C ALI C+ L+ A +++ + L + G++ +
Sbjct: 369 LRPDTICYNALIKGFCDM-GYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKA 427
Query: 400 EHVLRE 405
+H+ +E
Sbjct: 428 QHIFKE 433
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 66/164 (40%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+G + + + A M R D + T+M+ S+ G + A E+
Sbjct: 306 YGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMT 365
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D Y +++ + G LD E L E+ + + + Y L+ G NG
Sbjct: 366 ERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLIN 425
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
AQ +F+ ++ G P LIN A + ++A F M
Sbjct: 426 KAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQM 469
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/249 (18%), Positives = 99/249 (39%), Gaps = 19/249 (7%)
Query: 159 LALLEESFEANIRD----YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
L LL E E +R Y +I G+ + AE+ L + + + T ++++
Sbjct: 358 LTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICG 417
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMD------- 267
K G + A+ F+E++ LG ++ S++ +A L+ +L +M+
Sbjct: 418 MCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSL 477
Query: 268 -------AQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAY 320
+V+ + + + ++ +G A ++ + +G+ PD R +LIN +
Sbjct: 478 FLRLSQGTDKVFDIASL-QVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGF 536
Query: 321 QMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGK 380
G A+ F+ M+ G P ++ + + ALE + + G +
Sbjct: 537 CKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPES 596
Query: 381 EASCTLAAW 389
T+ W
Sbjct: 597 STYKTIMTW 605
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 88/206 (42%), Gaps = 6/206 (2%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ ++ G + +I +A+ M+ G D +T V++ + K+G L ++ F ++
Sbjct: 236 YSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYL---DDAFTLLQ 292
Query: 233 LL---GEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
LL G L YG ++ RA + + ++M + + +Y ++RG S G
Sbjct: 293 LLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEG 352
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
A + + G+ PD LI + G +A + + K P++ +
Sbjct: 353 RVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYS 412
Query: 350 LILSACEKENQLNRALEFLIDLERDG 375
+++ K +N+A ++E+ G
Sbjct: 413 ILICGMCKNGLINKAQHIFKEMEKLG 438
>gi|255660846|gb|ACU25592.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 418
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 85/183 (46%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L++ N +T +I G+ K ++ +A T M + F+ D +T ++ K G+
Sbjct: 232 MLDKGLVPNGVTFTTLIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGD 291
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
LK A++ +E+++ G DK +Y +++ + G LD L M + + + Y A
Sbjct: 292 LKQAQDLLDEMRMKGLKPDKITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTA 351
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G G + A+++ + G+ PD ++IN + + A + M++ G
Sbjct: 352 LISGLCQEGRATDAEKMLREMLSVGLKPDNGTYTMIINEFCKKEDVKTAAKLLKEMQRQG 411
Query: 341 LEP 343
P
Sbjct: 412 HVP 414
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 97/216 (44%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
A+ + ++ Y+ +I+G K+ ++ A + M +G + + VT T ++ + K G
Sbjct: 196 AMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDGHCKNG 255
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ A ET++++ D +Y +++ + G L + + LL EM + + Y
Sbjct: 256 KVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYT 315
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ G G+ + A + E + I D LI+ G++ A + M
Sbjct: 316 TLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLREMLSV 375
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
GL+P + +I++ K+ + A + L +++R G
Sbjct: 376 GLKPDNGTYTMIINEFCKKEDVKTAAKLLKEMQRQG 411
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/266 (19%), Positives = 107/266 (40%), Gaps = 6/266 (2%)
Query: 146 KLMEHPLYLQVAELA------LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR 199
K++EH + L+ +L +LE + A++ + ++H + K+ +I A++ ++ +
Sbjct: 106 KVLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIWIAQSVFDSITKW 165
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
G V+ ++ Y + G+L + + G D +Y ++ + ++
Sbjct: 166 GLRPSVVSFNTLMNGYIRLGDLDQGFKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEA 225
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
L EM + + + L+ G+ NG + A ++ + PD LI
Sbjct: 226 NDLFNEMLDKGLVPNGVTFTTLIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYG 285
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
G ++A MR GL+P ++ KE L+ A E + ++ +
Sbjct: 286 LCKKGDLKQAQDLLDEMRMKGLKPDKITYTTLIDGNCKEGDLDSAFELRETMVKESIRLD 345
Query: 380 KEASCTLAAWFKRLGVVEEVEHVLRE 405
A L + + G + E +LRE
Sbjct: 346 DVAYTALISGLCQEGRATDAEKMLRE 371
>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 947
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 115/256 (44%), Gaps = 11/256 (4%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
FE N+ Y +I G ++ AE L M RG + ++VTLT+++ Y + L+ AE
Sbjct: 249 FELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAE 308
Query: 226 ETFEEI-KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
+ E+ + G LD+ +YG ++ Y R +D L EM + + + AL+ G
Sbjct: 309 KVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALING 368
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
Y NG A+R+ + + P++ + L++ + G KA + + M + G++ +
Sbjct: 369 YCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSN 428
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTL-------AAWFKRLGVVE 397
+L + AL + + G + + CTL +F+ L +
Sbjct: 429 VVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWN 488
Query: 398 EVEHVLREYGLRETYS 413
++ + R YG R TY+
Sbjct: 489 DI--LARGYG-RSTYA 501
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 87/199 (43%), Gaps = 8/199 (4%)
Query: 178 HGYGKKMQ--------IQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFE 229
HGY ++ Q +TL + + + V + + K+G + A++ F
Sbjct: 674 HGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFS 733
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
+ L G D +Y +++ Y AG ++ L EM + + Y AL+ G +G
Sbjct: 734 SLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSG 793
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
N + AQ++F+ + G+ P+ +LI+ Y G +++A M K G+ PS +
Sbjct: 794 NLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYS 853
Query: 350 LILSACEKENQLNRALEFL 368
++ K+ + +A L
Sbjct: 854 ALIYGFCKQGDMGKATNLL 872
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 106/270 (39%), Gaps = 36/270 (13%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++R +++ +K + NA + R G + D T ++MV Y K G + +A +
Sbjct: 182 SLRSCNRLLSSLVRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFV 241
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEV--------------------------- 261
+E+ LG L+ +Y S++ V G ++R E+
Sbjct: 242 KEMDYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQ 301
Query: 262 --------LLREMDAQEVYVGSE-VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARM 312
+LREM+ E V E Y L+ GY + A R+ + + G+ + +
Sbjct: 302 CKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFI 361
Query: 313 CALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLE 372
C LIN Y GQ +A M LEP + ++ +E + +A+ ++
Sbjct: 362 CNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEML 421
Query: 373 RDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
R G +L R+G E+ HV
Sbjct: 422 RVGIQSNVVTHNSLLKGLCRVGAFEDALHV 451
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 73/166 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y I G K ++ +A+ ++ RGF D T ++ YS AGN+ A +E+
Sbjct: 712 YNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEML 771
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +Y +++ ++G LDR + L ++ + + Y L+ GY NGN+
Sbjct: 772 KRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTR 831
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
A + + GI+P + LI + G KA MR+
Sbjct: 832 EALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRE 877
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 85/210 (40%), Gaps = 4/210 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I G+ + ++ A M +GF + + + +V + G + A
Sbjct: 603 NVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLL 662
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEV--LLREMDAQEVYVGSEVYKALLRGYS 286
+++ L LD + + A G LD ++ L E S VY + G
Sbjct: 663 QKMVNLDVFLDHGYFDRLHKA--DDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLC 720
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
+G + A+++F ++ G +PD LI+ Y AG A++ M K GL P+
Sbjct: 721 KSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNII 780
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGF 376
+++ K L+RA + L G
Sbjct: 781 TYNALINGLCKSGNLDRAQKLFDKLHLKGL 810
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/245 (18%), Positives = 98/245 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L ++N+ + ++ G + ++A + M +RG D+V+ ++ + K G
Sbjct: 420 MLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGE 479
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A + +I G ++ +M+ + + + E M Y+
Sbjct: 480 FFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRT 539
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ GY GN E A +V E ++ I P + LI + ++++ M G
Sbjct: 540 LIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKG 599
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
L P+ +++ E +L++A D+ GF + + RLG ++E
Sbjct: 600 LSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEAN 659
Query: 401 HVLRE 405
+L++
Sbjct: 660 MLLQK 664
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 65/133 (48%)
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
V+ +L+ Y G + A VF+ + G P R C L+++ G+S A + ++
Sbjct: 150 VFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAILVYDHI 209
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVV 396
+ G+ P +++++A K+ +N A++F+ +++ GF + +L +G +
Sbjct: 210 NRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDM 269
Query: 397 EEVEHVLREYGLR 409
E E VL+ G R
Sbjct: 270 ERAEMVLKLMGER 282
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 64/143 (44%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+LL F + Y +IHGY + +A + M +RG + +T ++ K+G
Sbjct: 734 SLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSG 793
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
NL A++ F+++ L G + SY ++ Y + G L +M + + Y
Sbjct: 794 NLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYS 853
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQ 302
AL+ G+ G+ A + + ++
Sbjct: 854 ALIYGFCKQGDMGKATNLLDEMR 876
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 77/182 (42%)
Query: 158 ELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSK 217
EL + E F+ + + I+ Y +K I+NA + M + G + + ++ +
Sbjct: 136 ELVRVFEDFKFSPTVFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVR 195
Query: 218 AGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
G A ++ I LG D + MV AY + G ++ ++EMD +
Sbjct: 196 KGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVT 255
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y +L+ G G+ E A+ V + + GI + LLI Y + ++A + M
Sbjct: 256 YNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREME 315
Query: 338 KA 339
++
Sbjct: 316 RS 317
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 96/232 (41%), Gaps = 12/232 (5%)
Query: 173 YTKIIHGYGKKMQIQNA-----ENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
Y +I GY + ++ +A E + ++ FIC+ ++ Y K G + AE
Sbjct: 327 YGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICN-----ALINGYCKNGQVSEAERL 381
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
+ + SY +++ + R G++ + + EM + + +LL+G
Sbjct: 382 LMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCR 441
Query: 288 NGNSEGAQRVFEAIQFAGITPD-ARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G E A V+ + G+TPD C LL ++M G+ +A + ++ G S
Sbjct: 442 VGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKM-GEFFRALALWNDILARGYGRSTY 500
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
+++ K ++ A E ++ GF TL + +LG VEE
Sbjct: 501 AFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEE 552
Score = 38.1 bits (87), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 99/260 (38%), Gaps = 8/260 (3%)
Query: 157 AELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS 216
A ++E+ F N+ +KI+ + +I A L M D + +
Sbjct: 626 AYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRL--HKA 683
Query: 217 KAGNL---KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYV 273
GNL K+A+ E K P + Y + ++G +D + + + +
Sbjct: 684 DDGNLDSQKIADTLDESSKSFSLP-NSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSP 742
Query: 274 GSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAF 333
+ Y L+ GYS GN A + + + G+ P+ LIN +G +A F
Sbjct: 743 DNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLF 802
Query: 334 QNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRL 393
+ GL P+ +++ K AL+ + ++G L F +
Sbjct: 803 DKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQ 862
Query: 394 GVVEEVEHVLREYGLRETYS 413
G + + ++L E +RE ++
Sbjct: 863 GDMGKATNLLDE--MRELFA 880
>gi|222616383|gb|EEE52515.1| hypothetical protein OsJ_34721 [Oryza sativa Japonica Group]
Length = 820
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 76/171 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ G K+M++ AE L R+G D + ++ Y K GNL A + +E +
Sbjct: 297 YNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMV 356
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + ++ + + GM + +++ +Y + Y NGN
Sbjct: 357 SHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMN 416
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
A ++ +++ G+TPD LI+ Y + G+ Q A F+ M KA +EP
Sbjct: 417 EAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEP 467
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 90/216 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L+ + E +I Y + G+ K + + L M +G + +T + +V + + GN
Sbjct: 460 MLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGN 519
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L AE F ++ G + Y SMV Y+ +G D +L + Q V
Sbjct: 520 LSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSK 579
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ GN +GA V + + + PD + LI+ Y G KA+ F +M + G
Sbjct: 580 LINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRG 639
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
L ++++ K +L A + + + G
Sbjct: 640 LSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGI 675
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 99/226 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I GY K ++QNA+ M + D VT ++ + K+G + + + +
Sbjct: 437 YTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMA 496
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +YG ++ + R G L EVL ++ + + +Y +++ GY ++G ++
Sbjct: 497 DQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTD 556
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +F + G D C+ LIN G Q A + M + + P + ++
Sbjct: 557 HAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLI 616
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
S + +++A + D+ + G V L + + G ++E
Sbjct: 617 SIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQE 662
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 94/223 (42%), Gaps = 20/223 (8%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+LE ++ Y+K+I Y + + A M +RG D + T+++ Y KAG
Sbjct: 600 MLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGR 659
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGML--------DRGEVLLR-------- 264
L+ A + F ++ LG D +Y ++ +++ + +R LLR
Sbjct: 660 LQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLS 719
Query: 265 EMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAG 324
M ++ Y L+ G A+ +F+ + G+TPDA LIN Y G
Sbjct: 720 SMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQG 779
Query: 325 QSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
+ KA Q M G+EP + L S + + +R ++F
Sbjct: 780 EISKAEDLLQEMIDKGIEPDE----LTFSVLNQSSLRSRKIQF 818
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 75/177 (42%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D T ++ +A + A + + E+ +G D R Y S ++ G D V+L
Sbjct: 223 DVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVIL 282
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
+E++ ++V V + Y ++ G + A+++ E G PD + LI +Y
Sbjct: 283 QEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKM 342
Query: 324 GQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGK 380
G A ++ M G+E + V+ +L K + A+ + + + G + K
Sbjct: 343 GNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDK 399
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/245 (18%), Positives = 91/245 (37%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
A++ E N + ++ + K A L K G D+V + + Y K G
Sbjct: 354 AMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNG 413
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
N+ A + E+K G DK Y ++ Y G + + + EM + Y
Sbjct: 414 NMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYN 473
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L G+ +G + + + G+ P++ + I + G +A F + +
Sbjct: 474 ILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEK 533
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEV 399
G++ + + ++ + A + + R G +V + L R+G V+
Sbjct: 534 GIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGA 593
Query: 400 EHVLR 404
+V +
Sbjct: 594 SNVCK 598
>gi|15226343|ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01740
gi|4220475|gb|AAD12698.1| hypothetical protein [Arabidopsis thaliana]
gi|330250397|gb|AEC05491.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/264 (19%), Positives = 113/264 (42%), Gaps = 45/264 (17%)
Query: 150 HPLYLQVAELALLEESF----------EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR 199
+ L+ +++ +L+E F N+ Y+ I + K ++Q A + +MKR
Sbjct: 133 NSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRD 192
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
+ VT T ++ Y KAG+L++A ++E++ + L+ +Y +++ + + G + R
Sbjct: 193 ALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRA 252
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQR----------------------- 296
E + M V S VY ++ G+ G+S+ A +
Sbjct: 253 EEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISG 312
Query: 297 ------------VFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
+ E ++ + + PD + ++NAY +G+ + A + + + G EP
Sbjct: 313 LCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPD 372
Query: 345 DKCVALILSACEKENQLNRALEFL 368
++ ++ K QL+ A+ +
Sbjct: 373 VVALSTMIDGIAKNGQLHEAIVYF 396
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 105/261 (40%), Gaps = 41/261 (15%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + +I Y II G +++ A + M++ + D V T M+ Y K+G
Sbjct: 294 MLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGR 353
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+K A + ++ G D + +M+ + G L V A +V +Y
Sbjct: 354 MKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDV-----MYTV 408
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPD--------ARMC--ALLINAYQMAGQSQK-- 328
L+ G+ +R+F I AG+ PD A +C L++A+++ + +
Sbjct: 409 LIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEG 468
Query: 329 ------AYTA-----------------FQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
AYT F M +G+ P L++ A EKE + A
Sbjct: 469 LLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAAS 528
Query: 366 EFLIDLERDGFMVG-KEASCT 385
+ L+D++R G + +A C+
Sbjct: 529 DLLLDMQRRGLVTAVSDADCS 549
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 124/296 (41%), Gaps = 26/296 (8%)
Query: 93 SQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWV--RFMKPRRADWLAV------LKQ 144
S P T C + Q+I + G LS A++ R P R+ + +V L Q
Sbjct: 16 SNLPDPFT--CNKHIHQLI--NSNCGILSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQ 71
Query: 145 LKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMK-RRGFIC 203
+K E ++ ++ E ++ Y +I G+ + I++A L +++ GFIC
Sbjct: 72 VKFAEDIVH------SMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFIC 125
Query: 204 --DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKR--SYGSMVMAYVRAGMLDRG 259
D V+ + +SK +KM +E F + ++ + +Y + + + ++G L
Sbjct: 126 KPDIVSFNSLFNGFSK---MKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLA 182
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
M + + L+ GY G+ E A +++ ++ ++ + LI+
Sbjct: 183 LKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDG 242
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+ G+ Q+A + M + +EP+ I+ + + A++FL + G
Sbjct: 243 FCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQG 298
>gi|410110133|gb|AFV61146.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
rhodocnemis]
Length = 345
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 91/194 (46%), Gaps = 4/194 (2%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y +I YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 156 KNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDR 215
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ + +M++AY RAG++ + LL E+ + + + +L
Sbjct: 216 AAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDTAIHILA 274
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + F MR G P
Sbjct: 275 G---AGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFP 331
Query: 344 SDKCVALILSACEK 357
+A++L+A K
Sbjct: 332 DSDVIAIVLNAYGK 345
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 102/237 (43%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 56 NTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 115
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 116 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKT 175
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G+E
Sbjct: 176 LEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILF 235
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE +V R+
Sbjct: 236 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGA----GRIEEATYVFRQ 288
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 102/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + MK G + + + + ++ MY + A
Sbjct: 18 FMPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEAL 77
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 78 SVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 137
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + +I Y + +KA Q M+ G+E
Sbjct: 138 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIE 194
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 195 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRL 254
Query: 403 LRE 405
L E
Sbjct: 255 LHE 257
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 6/130 (4%)
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
YSKA ++ F +K LG D +Y +M+ + +A + L+ EM V
Sbjct: 3 YSKAISI------FSRLKRLGFMPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPN 56
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+ Y LL Y N A VF ++ D C ++I+ Y G +++A F
Sbjct: 57 TTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFW 116
Query: 335 NMRKAGLEPS 344
MRK G+EP+
Sbjct: 117 GMRKMGIEPN 126
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 77/174 (44%), Gaps = 4/174 (2%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E N+ Y ++ YG A + M+R+ + VT M+++Y K + A
Sbjct: 124 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANN 183
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
+E++ G + +Y +++ + + G LDR +L +++ + V + +++ ++ Y
Sbjct: 184 LIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYE 243
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
G A+R+ ++ PD I+ AG+ ++A F+ AG
Sbjct: 244 RAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAG 293
>gi|255574996|ref|XP_002528404.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532192|gb|EEF33997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 955
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 112/248 (45%), Gaps = 8/248 (3%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+LE + NI + ++ Y K ++ AE M+ G IC Q + M+ +Y++
Sbjct: 287 MLELGVQPNIATFGMLMGLYQKGWNVEEAEFVFSKMRSFGIIC-QSAYSAMITIYTRLSL 345
Query: 221 LKMAEETFEEIKLLGE---PLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
AEE I L+GE ++ ++ ++ AY + G L+ E +L EM
Sbjct: 346 YNKAEEI---IGLMGEDKVAMNVENWLVLLNAYSQQGRLEEAEQVLVEMQEASFSPNIVA 402
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
+ L+ GY N AQR+F IQ AG+ PD +I + G ++A ++ ++
Sbjct: 403 FNTLITGYGKLSNMAAAQRLFLDIQNAGLEPDETTYRSMIEGWGRTGNYKEAEWYYKELK 462
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
+ G P+ + +++ K + A+ L D+ + G L A +++ G +
Sbjct: 463 RLGYMPNSSNLYTLINLQAKHDDDEGAIGTLDDMLKIGCQHSSILGTLLKA-YEKAGRIN 521
Query: 398 EVEHVLRE 405
+V +L++
Sbjct: 522 KVPLLLKD 529
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 97/218 (44%), Gaps = 3/218 (1%)
Query: 162 LEESF--EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+ +SF E + R + +I+ ++ + M G + T +++ +Y K
Sbjct: 251 VSDSFGSELDFRVFNTLIYACSRRGNMLLGGKWFRMMLELGVQPNIATFGMLMGLYQKGW 310
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
N++ AE F +++ G + + +Y +M+ Y R + ++ E ++ M +V + E +
Sbjct: 311 NVEEAEFVFSKMRSFG-IICQSAYSAMITIYTRLSLYNKAEEIIGLMGEDKVAMNVENWL 369
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
LL YS G E A++V +Q A +P+ LI Y A F +++ A
Sbjct: 370 VLLNAYSQQGRLEEAEQVLVEMQEASFSPNIVAFNTLITGYGKLSNMAAAQRLFLDIQNA 429
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
GLEP + ++ + A + +L+R G+M
Sbjct: 430 GLEPDETTYRSMIEGWGRTGNYKEAEWYYKELKRLGYM 467
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/265 (19%), Positives = 108/265 (40%), Gaps = 7/265 (2%)
Query: 108 KQIICVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELA-----LL 162
+ ++ + + G +S L + + +K DW L + L V EL+ +L
Sbjct: 684 RDMLRIYQQCGMMSKLKDLYHKILKSE-VDWDQELYNCIINCCARALPVGELSRLFSEML 742
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+ F N + ++ YGK A+ ++RG + D ++ ++ Y + K
Sbjct: 743 QRGFSPNTITFNVMLDVYGKAKLFNKAKELFWMARKRGLV-DVISYNTVIAAYGHNKDFK 801
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
++ G + +Y M+ Y + G ++ +L+ M Y ++
Sbjct: 802 NMASAVRNMQFDGFSVSLEAYNCMLDGYGKEGQMECFRNVLQRMKQSSYTSDHYTYNIMI 861
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
Y G + V ++ G+ PD LI AY +AG + A + MR+ G+E
Sbjct: 862 NIYGEQGWIDEVAGVLTELRECGLRPDLCSYNTLIKAYGVAGMVEDAIDLVKEMRENGIE 921
Query: 343 PSDKCVALILSACEKENQLNRALEF 367
P + +++A +K ++ A+++
Sbjct: 922 PDKITYSNLITALQKNDKYLEAVKW 946
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 105/258 (40%), Gaps = 10/258 (3%)
Query: 154 LQVAELALLE---ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTV 210
L+ AE L+E SF NI + +I GYGK + A+ L ++ G D+ T
Sbjct: 381 LEEAEQVLVEMQEASFSPNIVAFNTLITGYGKLSNMAAAQRLFLDIQNAGLEPDETTYRS 440
Query: 211 MVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE 270
M+ + + GN K AE ++E+K LG + + +++ + D E + +D
Sbjct: 441 MIEGWGRTGNYKEAEWYYKELKRLGYMPNSSNLYTLINLQAKH---DDDEGAIGTLDDM- 496
Query: 271 VYVG---SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQ 327
+ +G S + LL+ Y G + + + + + C++L+ Y
Sbjct: 497 LKIGCQHSSILGTLLKAYEKAGRINKVPLLLKDSFYQHVLVNQTSCSILVMTYVKNCLVD 556
Query: 328 KAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLA 387
+A + + D L++ +C++ L A+ + + SCT+
Sbjct: 557 EALKVLGDKKWKDQTFEDNLYHLLICSCKELGNLESAVRIYTQMPKSEDKPNLHISCTVI 616
Query: 388 AWFKRLGVVEEVEHVLRE 405
+ LG E E + ++
Sbjct: 617 DIYSVLGCFAEAEKLYQQ 634
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/241 (19%), Positives = 95/241 (39%), Gaps = 36/241 (14%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E+ N+ ++ +++ Y ++ +++ AE L+ M+ F + V ++ Y K N+
Sbjct: 358 EDKVAMNVENWLVLLNAYSQQGRLEEAEQVLVEMQEASFSPNIVAFNTLITGYGKLSNMA 417
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A+ F +I+ G D+ +Y SM+
Sbjct: 418 AAQRLFLDIQNAGLEPDETTYRSMI----------------------------------- 442
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G+ GN + A+ ++ ++ G P++ LIN + A +M K G +
Sbjct: 443 EGWGRTGNYKEAEWYYKELKRLGYMPNSSNLYTLINLQAKHDDDEGAIGTLDDMLKIGCQ 502
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
S + +L A EK ++N+ L D +V + + L + + +V+E V
Sbjct: 503 HS-SILGTLLKAYEKAGRINKVPLLLKDSFYQHVLVNQTSCSILVMTYVKNCLVDEALKV 561
Query: 403 L 403
L
Sbjct: 562 L 562
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 2/186 (1%)
Query: 205 QVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLR 264
++ TV+ + YS G AE+ ++++K G LD ++ +V YV+AG L +L
Sbjct: 610 HISCTVIDI-YSVLGCFAEAEKLYQQLKCSGIALDMVAFSIVVRMYVKAGSLKDACSVLA 668
Query: 265 EMDAQEVYVGS-EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
M+ QE + +Y+ +LR Y G + ++ I + + D + +IN A
Sbjct: 669 TMEKQENIIPDIYLYRDMLRIYQQCGMMSKLKDLYHKILKSEVDWDQELYNCIINCCARA 728
Query: 324 GQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEAS 383
+ F M + G P+ ++L K N+A E + G + +
Sbjct: 729 LPVGELSRLFSEMLQRGFSPNTITFNVMLDVYGKAKLFNKAKELFWMARKRGLVDVISYN 788
Query: 384 CTLAAW 389
+AA+
Sbjct: 789 TVIAAY 794
>gi|168049914|ref|XP_001777406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671255|gb|EDQ57810.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 570
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D VT + M+ +Y K G A +E +K G DK +YG+MV + RAG + +
Sbjct: 112 DAVTYSTMIDVYGKVGKYDEAVALYESVKKSGWKPDKVTYGTMVRLFGRAGYISAAVSIF 171
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
EM + GS VY ++ G A +VF+ ++ AG+ P+A + ++ Y +
Sbjct: 172 DEMKGSGIQPGSVVYNIMISCLGRAGRMGHALKVFQEMKQAGVKPNAVTLSTVMEIYSRS 231
Query: 324 GQSQKAYTAFQNMRK 338
G+ + F +MR+
Sbjct: 232 GKVMEGLGIFHHMRQ 246
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 135/325 (41%), Gaps = 15/325 (4%)
Query: 47 RSLRSGPALEAIK--AEDMGKTQVKDDTSMFTWIQIGPNITEEQKQAISQFPRKMTKRC- 103
+ LR G E + AEDM ++ D ++ + N Q A++ F R +C
Sbjct: 51 KVLRRGQQWELSQQIAEDMINAGIRPDNITYSTLISCANRCNYQDAAMAWFDRMHDAQCV 110
Query: 104 --KAFVKQIICVSPETGNLSDLLAAWVRFMKPR-RADWLAVLKQLKLMEHPLYLQVAELA 160
+I V + G + +A + K + D + ++L Y+ A ++
Sbjct: 111 PDAVTYSTMIDVYGKVGKYDEAVALYESVKKSGWKPDKVTYGTMVRLFGRAGYISAA-VS 169
Query: 161 LLEESFEANIRD----YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS 216
+ +E + I+ Y +I G+ ++ +A MK+ G + VTL+ ++ +YS
Sbjct: 170 IFDEMKGSGIQPGSVVYNIMISCLGRAGRMGHALKVFQEMKQAGVKPNAVTLSTVMEIYS 229
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
++G + F ++ D Y +++ AG++ E LREM
Sbjct: 230 RSGKVMEGLGIFHHMRQ-DLACDIIVYNAVIKMCREAGLVPEAEQYLREMVEYGHQPNDW 288
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
Y+ ++ Y+ NG + AQR+F + AG PD L+ Y A +K M
Sbjct: 289 TYRNMISLYAKNGMAVEAQRMFSQLVEAGYQPDVMSYTSLLQGYGNAKDYEKVQEILHEM 348
Query: 337 RKAGLEPSDK--CVAL-ILSACEKE 358
A P ++ CV L +L AC+ +
Sbjct: 349 VSANCAPDERLWCVILNLLDACDTD 373
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/210 (17%), Positives = 88/210 (41%), Gaps = 3/210 (1%)
Query: 199 RGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDR 258
+ F + T VM+ + + +++++ E++ G D +Y +++ R D
Sbjct: 37 QNFNLNIYTYNVMLKVLRRGQQWELSQQIAEDMINAGIRPDNITYSTLISCANRCNYQDA 96
Query: 259 GEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLIN 318
M + + Y ++ Y G + A ++E+++ +G PD ++
Sbjct: 97 AMAWFDRMHDAQCVPDAVTYSTMIDVYGKVGKYDEAVALYESVKKSGWKPDKVTYGTMVR 156
Query: 319 AYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMV 378
+ AG A + F M+ +G++P +++S + ++ AL+ ++++ G
Sbjct: 157 LFGRAGYISAAVSIFDEMKGSGIQPGSVVYNIMISCLGRAGRMGHALKVFQEMKQAGVKP 216
Query: 379 GKEASCTLAAWFKRLGVVEE---VEHVLRE 405
T+ + R G V E + H +R+
Sbjct: 217 NAVTLSTVMEIYSRSGKVMEGLGIFHHMRQ 246
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 94/233 (40%), Gaps = 1/233 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I YGK + A ++K+ G+ D+VT MV ++ +AG + A F+E+K
Sbjct: 116 YSTMIDVYGKVGKYDEAVALYESVKKSGWKPDKVTYGTMVRLFGRAGYISAAVSIFDEMK 175
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G Y M+ RAG + + +EM V + ++ YS +G
Sbjct: 176 GSGIQPGSVVYNIMISCLGRAGRMGHALKVFQEMKQAGVKPNAVTLSTVMEIYSRSGKVM 235
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
+F ++ + D + +I + AG +A + M + G +P+D ++
Sbjct: 236 EGLGIFHHMR-QDLACDIIVYNAVIKMCREAGLVPEAEQYLREMVEYGHQPNDWTYRNMI 294
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
S K A L G+ + +L + E+V+ +L E
Sbjct: 295 SLYAKNGMAVEAQRMFSQLVEAGYQPDVMSYTSLLQGYGNAKDYEKVQEILHE 347
>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g31850, chloroplastic; AltName: Full=Protein PROTON
GRADIENT REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 85/180 (47%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M++ G + D VT T++V KAGN A +T + ++ G + +Y +++ +R
Sbjct: 354 MEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHR 413
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
LD L M++ V + Y + Y +G+S A FE ++ GI P+ C
Sbjct: 414 LDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNA 473
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+ + AG+ ++A F ++ GL P +++ K +++ A++ L ++ +G
Sbjct: 474 SLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENG 533
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 95/205 (46%), Gaps = 1/205 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G + I+ A++ L +K G I D T ++ Y K+G + E ++E+
Sbjct: 788 YNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMS 847
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLRE-MDAQEVYVGSEVYKALLRGYSMNGNS 291
+ ++ ++ V+AG +D L + M ++ + Y L+ G S +G
Sbjct: 848 THECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRL 907
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALI 351
A+++FE + G P+ + +LIN + AG++ A F+ M K G+ P K +++
Sbjct: 908 YEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVL 967
Query: 352 LSACEKENQLNRALEFLIDLERDGF 376
+ +++ L + +L+ G
Sbjct: 968 VDCLCMVGRVDEGLHYFKELKESGL 992
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 80/186 (43%), Gaps = 1/186 (0%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+L+ N Y +I+G+GK + A M + G D T +V+V G
Sbjct: 916 GMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVG 975
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM-DAQEVYVGSEVY 278
+ F+E+K G D Y ++ ++ L+ VL EM ++ + Y
Sbjct: 976 RVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTY 1035
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
+L+ + G E A +++ IQ AG+ P+ LI Y ++G+ + AY +Q M
Sbjct: 1036 NSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVT 1095
Query: 339 AGLEPS 344
G P+
Sbjct: 1096 GGFSPN 1101
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 95/215 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ E F +++ Y+ ++ G GK+ I + L M+ G + T T+ + + +AG
Sbjct: 214 MILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGK 273
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A E + + G D +Y ++ A A LD + + +M Y
Sbjct: 274 INEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYIT 333
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL +S N + + ++ + ++ G PD +L++A AG +A+ MR G
Sbjct: 334 LLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQG 393
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+ P+ ++ + ++L+ ALE ++E G
Sbjct: 394 ILPNLHTYNTLICGLLRVHRLDDALELFGNMESLG 428
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 95/221 (42%), Gaps = 18/221 (8%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
++LQV + + + Y ++ YGK +I M + +T ++
Sbjct: 807 VFLQVKSTGCIPD-----VATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIV 861
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKR-------SYGSMVMAYVRAGMLDRGEVLLR 264
+ KAGN+ A + + ++ + R +YG ++ ++G L + L
Sbjct: 862 ISGLVKAGNVDDALDLYYDL------MSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFE 915
Query: 265 EMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAG 324
M +Y L+ G+ G ++ A +F+ + G+ PD + ++L++ M G
Sbjct: 916 GMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVG 975
Query: 325 QSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
+ + F+ ++++GL P C LI++ K ++L AL
Sbjct: 976 RVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEAL 1016
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/243 (19%), Positives = 95/243 (39%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+E ++ YT +I ++ A+ MK D+VT ++ +S +L
Sbjct: 286 DEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLD 345
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
++ + E++ G D ++ +V A +AG L M Q + Y L+
Sbjct: 346 SVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLI 405
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G + A +F ++ G+ P A + I+ Y +G S A F+ M+ G+
Sbjct: 406 CGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIA 465
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ L + K + A + L+ G + + + ++G ++E +
Sbjct: 466 PNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKL 525
Query: 403 LRE 405
L E
Sbjct: 526 LSE 528
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 75/190 (39%), Gaps = 4/190 (2%)
Query: 159 LALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
+ LL+E + N+ +T I G+ +I A L M G D VT TV++
Sbjct: 243 MGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDA 302
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
A L A+E FE++K D+ +Y +++ + LD + EM+
Sbjct: 303 LCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPD 362
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+ L+ GN A + ++ GI P+ LI + A F
Sbjct: 363 VVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFG 422
Query: 335 NMRKAGLEPS 344
NM G++P+
Sbjct: 423 NMESLGVKPT 432
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 88/240 (36%), Gaps = 5/240 (2%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
NI ++ K + + A+ +K G + D VT +M+ YSK G + A +
Sbjct: 467 NIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLL 526
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E+ G D S++ +A +D + M ++ Y LL G N
Sbjct: 527 SEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKN 586
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A +FE + G P+ L + + A M G P
Sbjct: 587 GKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTY 646
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKE--ASCTLAAWFKRLGVVEEVEHVLREY 406
I+ K Q+ A+ F +++ +V + CTL + ++E+ ++ +
Sbjct: 647 NTIIFGLVKNGQVKEAMCFFHQMKK---LVYPDFVTLCTLLPGVVKASLIEDAYKIITNF 703
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 79/203 (38%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y I K ++ A L M+ GF+ + + ++ + K+ A E + +
Sbjct: 156 YLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMI 215
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
L G ++Y S+++ + +D LL+EM+ + + +R G
Sbjct: 216 LEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKIN 275
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + + G PD +LI+A A + A F+ M+ +P +L
Sbjct: 276 EAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLL 335
Query: 353 SACEKENQLNRALEFLIDLERDG 375
L+ +F ++E+DG
Sbjct: 336 DRFSDNRDLDSVKQFWSEMEKDG 358
>gi|401405234|ref|XP_003882067.1| putative PPR repeat-containing protein [Neospora caninum Liverpool]
gi|325116481|emb|CBZ52035.1| putative PPR repeat-containing protein [Neospora caninum Liverpool]
Length = 1159
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 94/196 (47%), Gaps = 2/196 (1%)
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL 221
L +S +++++ +I +++A L M R F D+ + ++ ++ G+
Sbjct: 623 LLDSGRGSVKNFNALIKAKIFFDDMESALEILEKMTRHSFPPDEESFVHLIGGAARKGDS 682
Query: 222 KMAEETFEEIK-LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A F +++ L P R Y +++ A+V AG L LLR+M+ + + VY
Sbjct: 683 ARARMLFLKMRSTLSSPPSARVYAALIQAHVAAGDLASAFALLRKMEDEHIPADCVVYTV 742
Query: 281 LLRGYSMNGNSEGAQRVFEAIQ-FAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ G A R F ++ + G+ PD + ++I A + G++++A ++R +
Sbjct: 743 LIDGLVRAKKVRKAWRTFWNMRTWKGLEPDEVLFTVMIKACAVRGEAERAINLLDDLRAS 802
Query: 340 GLEPSDKCVALILSAC 355
GL P+D + ++ AC
Sbjct: 803 GLHPTDVTYSELMHAC 818
>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 548
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 1/192 (0%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
AN++ YT +++G+ K + A N M+ R I + VT + ++ K G + A +
Sbjct: 339 ANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKL 398
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
+E+ G+P + +Y S++ A + +D+ LL + Q + Y L++G
Sbjct: 399 VDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQ 458
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
+G E AQ VFE + G D ++I + G KA M G P+ K
Sbjct: 459 SGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKT 518
Query: 348 VAL-ILSACEKE 358
L ILS EK+
Sbjct: 519 YELVILSLFEKD 530
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/262 (18%), Positives = 107/262 (40%), Gaps = 8/262 (3%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L++ + + +I G K I A + + +GF DQV+ ++ K G
Sbjct: 122 ILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGR 181
Query: 221 LKMAEETFEEIK-LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ A + + + L +P + Y ++ +A +++ L +M A+ + Y
Sbjct: 182 ITAALQLLKRVDGKLVQP-NAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYN 240
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
AL+ G+S A +F ++ I P+ +L++ + G+ A M K
Sbjct: 241 ALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKD 300
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEV 399
++P ++ N++N+A + + G + + T+ F ++ +V+E
Sbjct: 301 DIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEA 360
Query: 400 EHVLREYGLRE------TYSKI 415
++ E R+ TYS +
Sbjct: 361 INLFEEMRCRKIIPNVVTYSSL 382
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 46/242 (19%), Positives = 99/242 (40%), Gaps = 10/242 (4%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y +I G+ ++ A + MK+ + T ++V + K G + A+
Sbjct: 235 DVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVL 294
Query: 229 -----EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
++IK P D +Y S++ Y +++ + + M + V ++Y ++
Sbjct: 295 AIMMKDDIK----P-DVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVN 349
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G+ + A +FE ++ I P+ + LI+ G+ A M G P
Sbjct: 350 GFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPP 409
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+ + IL A K + +++A+ L +L+ G L + G +E+ ++V
Sbjct: 410 NIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVF 469
Query: 404 RE 405
+
Sbjct: 470 ED 471
>gi|410110069|gb|AFV61114.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
lycioides]
Length = 429
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 96/210 (45%), Gaps = 31/210 (14%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L A F
Sbjct: 220 NVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLF 279
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA-------------------- 268
++++ G +D+ Y +M++AY RAG++ + LL E+ +
Sbjct: 280 QKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKSPDNIPRDTAIHILAGAGRIE 339
Query: 269 QEVYVGSE-----------VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
+ YV + V++ ++ +S VF+ ++ G PD+ + AL++
Sbjct: 340 EATYVFRQAIDAGEVKDITVFERMIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVL 399
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
NAY + KA + M++ G SD+
Sbjct: 400 NAYGKLHEFDKANGVYMEMQEVGCVFSDEV 429
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + M+ G + + + + ++ MY + A
Sbjct: 77 FTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENKKFLEAL 136
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 137 SVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 196
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + ++ Y + +KA Q M+ G+E
Sbjct: 197 ---GDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIE 253
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 254 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRL 313
Query: 403 LRE 405
L E
Sbjct: 314 LHE 316
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 101/237 (42%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 115 NTASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 174
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 175 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKT 234
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G+E
Sbjct: 235 LEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLY 294
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+ + A LA G +EE +V R+
Sbjct: 295 QTMIVAYERAGLVAHAKRLLHELKSPDNIPRDTAIHILAG----AGRIEEATYVFRQ 347
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/247 (19%), Positives = 97/247 (39%), Gaps = 31/247 (12%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E N+ Y ++ YG A + M+R+ + + VT M+++Y K + A
Sbjct: 183 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANN 242
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
+E++ G + +Y +++ + + G LDR +L +++ + V + +Y+ ++ Y
Sbjct: 243 LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYE 302
Query: 287 MNGNSEGAQR-------------------------------VFEAIQFAGITPDARMCAL 315
G A+R VF AG D +
Sbjct: 303 RAGLVAHAKRLLHELKSPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFER 362
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+I+ + + F MR G P +AL+L+A K ++ ++A ++++ G
Sbjct: 363 MIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANGVYMEMQEVG 422
Query: 376 FMVGKEA 382
+ E
Sbjct: 423 CVFSDEV 429
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I +GK+ A + L M++ D V + ++ + K + A F +K
Sbjct: 14 YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 73
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +M+ + +A + L+ EM V + Y LL Y N
Sbjct: 74 RSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENKKFL 133
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
A VF ++ D C ++I+ Y G +++A F MRK G+EP+
Sbjct: 134 EALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 185
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/172 (18%), Positives = 76/172 (44%), Gaps = 2/172 (1%)
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
D+ +Y +++ + + G+ D L++M+ V +Y L+ + A +F
Sbjct: 10 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 69
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKE 358
++ +G TPD +IN + A ++A + MR AG+ P+ + +L+ +
Sbjct: 70 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVEN 129
Query: 359 NQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRE 410
+ AL ++ ++ + + +LG+ +E + + +G+R+
Sbjct: 130 KKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF--WGMRK 179
>gi|449523013|ref|XP_004168519.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like, partial [Cucumis sativus]
Length = 594
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 87/209 (41%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+L E + NI Y +I Y + A + MKR GF D V+ T ++ + ++
Sbjct: 137 TMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCPDVVSYTSLISTFGRSQ 196
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
A E F+ +K + SY +++ AY G L + +LREM+ ++
Sbjct: 197 QPARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLPQAVDILREMEQDGIHPNVVSIC 256
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
LL G V A + GI + C I +Y G+ +KA +++M
Sbjct: 257 TLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNIGEYEKAINLYRSMENK 316
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFL 368
+P +++S C + ++ AL F
Sbjct: 317 TTKPDSVTFTILISGCCRMSKYEEALCFF 345
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 100/242 (41%), Gaps = 14/242 (5%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
++ Y Q A + MK D TL +++ K A E F ++
Sbjct: 46 VLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMR--- 102
Query: 236 EPLDKRS--------YGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
+KRS + S++ Y G ++ + + M A+ + Y AL+ Y+
Sbjct: 103 ---EKRSECRPDVVTFTSIIHLYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYAS 159
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
+G + A VF+ ++ +G PD LI+ + + Q +A F M++ +P+
Sbjct: 160 HGMDKEAFSVFDEMKRSGFCPDVVSYTSLISTFGRSQQPARAREVFDMMKRNKCKPNLVS 219
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYG 407
++ A L +A++ L ++E+DG + CTL A R G ++ VL
Sbjct: 220 YNALMDAYGSNGYLPQAVDILREMEQDGIHPNVVSICTLLAACGRFGQKVNIDSVLSAAE 279
Query: 408 LR 409
LR
Sbjct: 280 LR 281
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 103/264 (39%), Gaps = 19/264 (7%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRD 172
+ P ++ LLAA RF + D + L AEL N
Sbjct: 248 IHPNVVSICTLLAACGRFGQKVNIDSV--------------LSAAEL----RGIHLNTIA 289
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
I Y + + A N +M+ + D VT T+++ + + A F+E+
Sbjct: 290 CNSAIGSYMNIGEYEKAINLYRSMENKTTKPDSVTFTILISGCCRMSKYEEALCFFKEML 349
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
L PL Y SM+ AY + G L + E L + Y A++ YS + E
Sbjct: 350 DLRIPLSSEIYSSMICAYSKQGQLVKAESLFNSLKGSGCCPDLVTYTAMINAYSASEMWE 409
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
+++ ++ I D+ C+ L+ A+ Q+ + M++ G+ +D +L
Sbjct: 410 KVCALYQEMEANNIQLDSIACSALMKAFNKGNQASNVLILAEIMKEKGIPFNDANFFEML 469
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
SAC +A + LI+L F
Sbjct: 470 SACSILRDWRKATD-LINLMEPSF 492
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/203 (18%), Positives = 82/203 (40%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
++ N+ ++ G+ Q N ++ L A + RG + + + Y G +
Sbjct: 245 QDGIHPNVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNIGEYE 304
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A + ++ D ++ ++ R + +EM + + SE+Y +++
Sbjct: 305 KAINLYRSMENKTTKPDSVTFTILISGCCRMSKYEEALCFFKEMLDLRIPLSSEIYSSMI 364
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
YS G A+ +F +++ +G PD +INAY + +K +Q M ++
Sbjct: 365 CAYSKQGQLVKAESLFNSLKGSGCCPDLVTYTAMINAYSASEMWEKVCALYQEMEANNIQ 424
Query: 343 PSDKCVALILSACEKENQLNRAL 365
+ ++ A K NQ + L
Sbjct: 425 LDSIACSALMKAFNKGNQASNVL 447
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 101/262 (38%), Gaps = 9/262 (3%)
Query: 168 ANIRDYTK----IIHGYGKKMQIQNAENTLLAMKRRGFIC--DQVTLTVMVVMYSKAGNL 221
NIR T +IH K Q A +M+ + C D VT T ++ +YS G +
Sbjct: 69 TNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRSECRPDVVTFTSIIHLYSVRGQI 128
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
+ + F + G + SY +++ AY GM + EM Y +L
Sbjct: 129 EDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCPDVVSYTSL 188
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+ + + A+ VF+ ++ P+ L++AY G +A + M + G+
Sbjct: 189 ISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLPQAVDILREMEQDGI 248
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEH 401
P+ + +L+AC + Q L E G + A + + +G E E
Sbjct: 249 HPNVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNIG---EYEK 305
Query: 402 VLREYGLRETYSKIPGSRSIAL 423
+ Y E + P S + +
Sbjct: 306 AINLYRSMENKTTKPDSVTFTI 327
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 95/212 (44%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
AN++ Y +I+G+ K + A M + D +T + ++ K+G + A E
Sbjct: 471 ANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALEL 530
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
+E+ G+ D +Y S++ A + +D+ LL ++ Q + Y L++G
Sbjct: 531 VDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQ 590
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
+G E A++VFE + G D ++I + G +A M + G P K
Sbjct: 591 SGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKT 650
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVG 379
+I+ + ++++ + A + L ++ G +V
Sbjct: 651 YEIIILSLFEKDENDMAEKLLREMIMRGLLVA 682
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 97/230 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ ++ ++ G+ K I+ A+N L M ++ D VT + ++ Y + AE F
Sbjct: 402 DVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIF 461
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ G + +SY M+ + + M+D L +EM ++++ Y +L+ G +
Sbjct: 462 NTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKS 521
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G A + + + + G PD +++A KA T ++ G+ P
Sbjct: 522 GRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTY 581
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
+++ + +L A + DL G+ + A + F G+ +E
Sbjct: 582 TILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDE 631
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 97/237 (40%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y +I G+ ++++A + M + I D T +++V + K GN+K A+
Sbjct: 367 DVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVL 426
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ D +Y S++ Y +++ E + M + V + Y ++ G+
Sbjct: 427 AMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKI 486
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
+ A ++F+ + I PD + LI+ +G+ A M G +P
Sbjct: 487 KMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITY 546
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
IL A K++ +++A+ L L+ G L + G +E+ V +
Sbjct: 547 NSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFED 603
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 113/266 (42%), Gaps = 10/266 (3%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNA---ENTLLAMKRRGFICDQVTLTVMVVMYSK 217
+L+ +E + T I G+ K QI A + ++AM GF DQV+ ++ K
Sbjct: 254 ILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAM---GFHLDQVSYGTLINGLCK 310
Query: 218 AGNLKMAEETF--EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
G K A E + KL+ +P D Y +++ + ++ L E ++ ++
Sbjct: 311 VGETKAALELLRRNDGKLV-QP-DVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDV 368
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
Y AL+ G+ + G + A +F + I PD ++L++ + G ++A
Sbjct: 369 FTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAM 428
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGV 395
M K ++P + ++ N++N+A + G ++ + F ++ +
Sbjct: 429 MMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKM 488
Query: 396 VEEVEHVLREYGLRETYSKIPGSRSI 421
V+E + +E ++ + + S+
Sbjct: 489 VDEAMKLFKEMHHKQIFPDVITYSSL 514
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/203 (18%), Positives = 81/203 (39%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y II G K + +A + + D T ++ + G LK A + F ++
Sbjct: 336 YNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMT 395
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
D ++ +V + + G + + +L M Q + Y +L+ GY +
Sbjct: 396 SKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVN 455
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ +F + G+T + + ++IN + +A F+ M + P + ++
Sbjct: 456 KAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLI 515
Query: 353 SACEKENQLNRALEFLIDLERDG 375
K +++ ALE + ++ G
Sbjct: 516 DGLCKSGRISYALELVDEMHYRG 538
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 95/209 (45%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ + +I GY K++++ +A + M G D +T ++ KAG + ETF
Sbjct: 429 DVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETF 488
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+ L G + +Y ++ + R+ ++ ++ +M + ++ + + L+ G+ N
Sbjct: 489 QEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRN 548
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G+ EGA +F+ ++ G + A LI A+ A F M G
Sbjct: 549 GDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTY 608
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFM 377
+++ K ++RA L+++ + GF+
Sbjct: 609 RVLIDGSCKTANVDRAYMHLVEMIKKGFI 637
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 87/231 (37%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y II GY K +Q A L +GF+ DQVT ++ G+++ A E F E +
Sbjct: 293 YNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQ 352
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D Y S+V G++ ++ EM + + + Y ++ G GN
Sbjct: 353 AKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNIS 412
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A V G PD LI+ Y + A + M + G+ P +L
Sbjct: 413 DATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVL 472
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+ K ++N E ++ G L F R +EE V+
Sbjct: 473 NGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVI 523
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 92/216 (42%), Gaps = 2/216 (0%)
Query: 126 AWVRFMKPRRADWLAVLKQLKLMEHPLY-LQVAELALLEESFEANIRDYTKIIHGYGKKM 184
A + +KP + +++K L L L+ LQV + EE +I+ Y +I+G K
Sbjct: 351 AQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMN-EMAEEGCHPDIQTYNIVINGLCKMG 409
Query: 185 QIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYG 244
I +A + +G++ D T ++ Y K L A + E + G D +Y
Sbjct: 410 NISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYN 469
Query: 245 SMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFA 304
S++ +AG ++ +EM + + Y L+ + + E A +V +
Sbjct: 470 SVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQE 529
Query: 305 GITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
G+ PDA LI + G + AY FQ + + G
Sbjct: 530 GLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKG 565
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 94/241 (39%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y +I G KK Q A + L M +G + D T ++ Y K ++ A E
Sbjct: 254 DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELL 313
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ G D+ +Y S++ G ++R L E A+ + VY +L++G +
Sbjct: 314 KDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQ 373
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G A +V + G PD + ++IN G A + G P
Sbjct: 374 GLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTF 433
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGL 408
++ K +L+ AL+ + + G ++ + G V EV +E L
Sbjct: 434 NTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMIL 493
Query: 409 R 409
+
Sbjct: 494 K 494
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/192 (18%), Positives = 84/192 (43%), Gaps = 4/192 (2%)
Query: 157 AELALLEESFEANIR----DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMV 212
+ L L+E +E I Y +++G K ++ T M +G + +T +++
Sbjct: 448 SALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILI 507
Query: 213 VMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY 272
+ ++ ++ A + ++ G D S+ +++ + R G L+ +L ++++ +
Sbjct: 508 ENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYS 567
Query: 273 VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTA 332
++ + L+ +S N A+++F+ + G D+ +LI+ +AY
Sbjct: 568 ATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMH 627
Query: 333 FQNMRKAGLEPS 344
M K G PS
Sbjct: 628 LVEMIKKGFIPS 639
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 69/183 (37%), Gaps = 1/183 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L N+ + K++H K+ + A L + +RG + T + + +AG
Sbjct: 177 MLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGR 236
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A + ++ P D +Y +++ + M LR M Q Y
Sbjct: 237 LPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNT 295
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ GY + A + + F G PD LIN G ++A F + G
Sbjct: 296 IIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKG 355
Query: 341 LEP 343
++P
Sbjct: 356 IKP 358
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/144 (18%), Positives = 61/144 (42%), Gaps = 6/144 (4%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+E + + +I+G+ + ++ A ++ +G+ T ++ +S N+
Sbjct: 528 QEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMH 587
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
MAE+ F+E+ G D +Y ++ + +DR + L EM + + ++
Sbjct: 588 MAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVI 647
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGI 306
++N RVF+A+ I
Sbjct: 648 NSLTVN------HRVFQAVGIIHI 665
>gi|357506669|ref|XP_003623623.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498638|gb|AES79841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 115/281 (40%), Gaps = 8/281 (2%)
Query: 136 ADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLA 195
+D+ +L L + + P + Q L + Y+ +I + K +++ A+ L
Sbjct: 112 SDFNHLLMALVIAQKPDFCQTMFTKLSSFHLVPDSCTYSIMIRCHCSKNELEEAKRVLFT 171
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
+ GF D T+TV++ K G +K A E FE ++ G L ++Y ++ G
Sbjct: 172 VLENGFEPDSATITVLINSLCKRGKVKKAMEVFEFLERKGLKLGVQAYNCLLRGLAYVGR 231
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
+D +L +M + V Y A++ G G S+ A +F+ G+ PD
Sbjct: 232 VDEAVEILMDMKTGNIGVDVYSYSAVMNGLCKVGRSDEAMELFDEAVGVGLRPDVVTFNA 291
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
LI Y G+ + + M++ G +L K N+ A ++ R G
Sbjct: 292 LIEGYSREGREMEGVGVLKMMKEHGCVADLINYKTVLHGLLKWNETVEAFGVYKEMVRIG 351
Query: 376 FMVGKEASCTLAAWFKRL-----GVVE---EVEHVLREYGL 408
F V TL +L G++E EV ++E GL
Sbjct: 352 FEVDSRMMGTLVRRLCKLSWREKGLLEDACEVFEKMKERGL 392
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 89/232 (38%), Gaps = 23/232 (9%)
Query: 115 PETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYT 174
P+ + L+ + R + R + + VLK +K E A++ +Y
Sbjct: 284 PDVVTFNALIEGYSR--EGREMEGVGVLKMMK----------------EHGCVADLINYK 325
Query: 175 KIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMV-----VMYSKAGNLKMAEETFE 229
++HG K + A M R GF D + +V + + + G L+ A E FE
Sbjct: 326 TVLHGLLKWNETVEAFGVYKEMVRIGFEVDSRMMGTLVRRLCKLSWREKGLLEDACEVFE 385
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
++K G +DKR+ MV A R D V L +M + ++ ++ G G
Sbjct: 386 KMKERGLVVDKRTVEVMVEALFRGEKFDEALVNLNDMVRWGYSLEGIAFEEVIEGLCGQG 445
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+ A +Q G D +L+N G+ A F K G+
Sbjct: 446 RVDEAVSTLLLLQANGGFLDRVSFGVLVNELNAHGRVFCASFLFGVALKHGV 497
>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1245
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 94/210 (44%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M++ G+ VT ++ Y K G K A E + + L G D +Y ++ R+
Sbjct: 219 MEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNR 278
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
+G +LLR+M + ++ Y LL G+S G A+++ + G++P+
Sbjct: 279 SAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNA 338
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
LI+ + G ++A F M GL ++ ++L K + + A F + ++R+G
Sbjct: 339 LIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNG 398
Query: 376 FMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
VG+ + + G ++E +L E
Sbjct: 399 VCVGRITYTGMIDGLCKNGFLDEAVVMLNE 428
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 79/201 (39%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I G K + A L M + G D VT + ++ + + G LK A+E I
Sbjct: 406 YTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIY 465
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+G + Y +++ R G L + M + + L+ G
Sbjct: 466 RVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVA 525
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ + GI P+A LIN Y +G+ KA++ F M K G P+ +L
Sbjct: 526 EAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLL 585
Query: 353 SACEKENQLNRALEFLIDLER 373
K L A +FL L+
Sbjct: 586 KGLCKGGHLIAAEKFLKSLQN 606
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 90/217 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L N + +I G+ + + A M+ +G I +V+ V++ K
Sbjct: 324 MLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAE 383
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+A + +K G + + +Y M+ + G LD V+L EM + Y A
Sbjct: 384 FDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSA 443
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G+ G + A+ + I G++P+ + + LI G ++ ++ M G
Sbjct: 444 LINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEG 503
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
P +++++ K ++ A EF+ + DG +
Sbjct: 504 NTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 540
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 104/257 (40%), Gaps = 10/257 (3%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMK---RRGFICDQVTL 208
L+ ++ + ++L +SF YT +I G +K + A L A + R + ++V
Sbjct: 635 LFGEMVQRSILPDSFT-----YTSLISGLCRKGKTVIA--ILFAKEAEARGNLVPNKVMY 687
Query: 209 TVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
T V KAG K +++ LG D + +M+ Y R G +++ LL EM
Sbjct: 688 TCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGN 747
Query: 269 QEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
Q Y LL GYS + + ++ ++ +GI PD C +I + +
Sbjct: 748 QNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEI 807
Query: 329 AYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAA 388
+ G+E +++S C ++N A + + + G + K + +
Sbjct: 808 GLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVS 867
Query: 389 WFKRLGVVEEVEHVLRE 405
R +E VL E
Sbjct: 868 VLNRNHRFQESRMVLHE 884
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/266 (18%), Positives = 103/266 (38%), Gaps = 37/266 (13%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
++ + +I Y+ +I+G+ + +++ A+ + + R G + + + ++ + G LK
Sbjct: 431 KDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLK 490
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
+E + L G D ++ +V + +AG + E +R M + + + + L+
Sbjct: 491 ETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLI 550
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITP---------------------------------- 308
GY +G A VF+ + G P
Sbjct: 551 NGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAA 610
Query: 309 -DARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
D MC LI A +G KA + F M + + P ++S ++ + A+ F
Sbjct: 611 VDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILF 670
Query: 368 LIDLERDGFMVGKEA--SCTLAAWFK 391
+ E G +V + +C + FK
Sbjct: 671 AKEAEARGNLVPNKVMYTCFVDGMFK 696
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 73/183 (39%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +++G+ + ++ A L M G + VT ++ + GN K A + F ++
Sbjct: 301 YNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMME 360
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + SYG ++ + D M V VG Y ++ G NG +
Sbjct: 361 AKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLD 420
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + GI PD + LIN + G+ + A + + GL P+ + ++
Sbjct: 421 EAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLI 480
Query: 353 SAC 355
C
Sbjct: 481 YNC 483
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 83/202 (41%), Gaps = 6/202 (2%)
Query: 155 QVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
Q+ +L L + N +I GY + +I+ + L M + + T +++
Sbjct: 709 QMDKLGLTRDVVTTN-----AMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHG 763
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
YSK ++ + + + L G DK + S+++ + ML+ G +L+ + V V
Sbjct: 764 YSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVD 823
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+ L+ NG A + + GI+ D C +++ + Q++
Sbjct: 824 RHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLH 883
Query: 335 NMRKAGLEP-SDKCVALILSAC 355
M K G+ P S K + L+ C
Sbjct: 884 EMSKQGISPESRKYIGLLNGLC 905
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 48/246 (19%), Positives = 94/246 (38%), Gaps = 4/246 (1%)
Query: 166 FEANIRD---YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E N D + ++ K ++ AE + M G + + V+ ++ Y +G
Sbjct: 501 LEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGL 560
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A F+E+ +G +YGS++ + G L E L+ + V + + L+
Sbjct: 561 KAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLI 620
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT-AFQNMRKAGL 341
+GN + A +F + I PD+ LI+ G++ A A + + L
Sbjct: 621 TAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNL 680
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEH 401
P+ + K Q F +++ G + + + R+G +E+
Sbjct: 681 VPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHD 740
Query: 402 VLREYG 407
+L E G
Sbjct: 741 LLFEMG 746
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 44/233 (18%), Positives = 96/233 (41%), Gaps = 2/233 (0%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
A++ Y +IH + + L M++R ++VT ++ +S G + +A +
Sbjct: 260 NADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQ 319
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV-YKALLRGY 285
E+ G + ++ +++ ++ G + M+A+ + +G+EV Y LL G
Sbjct: 320 LLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGL-IGTEVSYGVLLDGL 378
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
N + A+ + ++ G+ +I+ G +A M K G++P
Sbjct: 379 CKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDI 438
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
+ +++ + +L A E + + R G TL R+G ++E
Sbjct: 439 VTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKE 491
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 89/243 (36%), Gaps = 35/243 (14%)
Query: 169 NIRDYTKIIHGYGKKMQIQNA---------------------------ENTLLAMK---R 198
N+ Y ++HGY K+ + + E+ +L +
Sbjct: 753 NLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKIL 812
Query: 199 RGFIC-----DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRA 253
+ FIC D+ T +++ G + A + + LG LDK + ++V R
Sbjct: 813 KAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRN 872
Query: 254 GMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
++L EM Q + S Y LL G G+ + A V E + I P
Sbjct: 873 HRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAE 932
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
+ ++ A G++ +A ++M K L P+ ++ K + ALE + +
Sbjct: 933 SAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSN 992
Query: 374 DGF 376
G
Sbjct: 993 CGL 995
>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 98/217 (45%), Gaps = 1/217 (0%)
Query: 182 KKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKR 241
K+ + + E K RG D +++V + +L +A E +E++ G K
Sbjct: 232 KEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKG 291
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI 301
+Y ++++A V+ G L EM + + + V ++L++GY + G+ A ++F+ +
Sbjct: 292 TYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEV 351
Query: 302 QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQL 361
G+ PD + ++LIN G +KAY + M+ G++P+ V +L ++N L
Sbjct: 352 VEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLL 411
Query: 362 NRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
A + G + L W LG V E
Sbjct: 412 EHAYGLFDEAVEHG-ITNVVTYNILLKWLGELGKVNE 447
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 86/205 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+ E ++ YT +I G K +I A MK +G D V + ++ + K +
Sbjct: 595 MCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHD 654
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ A + F E+ +G + Y SM+ ++ ++ L +EM +V +VY +
Sbjct: 655 MESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTS 714
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G G A ++ + I PD M +LIN GQ + A + M
Sbjct: 715 IIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNN 774
Query: 341 LEPSDKCVALILSACEKENQLNRAL 365
+ PS ++++ +E L A
Sbjct: 775 ITPSVLVYNILIAGNFREGNLQEAF 799
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 78/182 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I G+ K +++A + G + V M+ + N++ A +E+
Sbjct: 642 YSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMI 701
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
P D + Y S++ ++ G L L EM ++++ +Y L+ G S NG E
Sbjct: 702 KNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLE 761
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A ++ + + ITP + +LI G Q+A+ M GL P D +++
Sbjct: 762 NASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILV 821
Query: 353 SA 354
+
Sbjct: 822 NG 823
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/213 (19%), Positives = 90/213 (42%), Gaps = 4/213 (1%)
Query: 159 LALLEESFEANI----RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
+ E+ ANI + +I+G GK ++ ++ L ++GF+ +T ++
Sbjct: 519 FVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDG 578
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
+ K G + A + E+ G D +Y S++ ++ + + +M + + +
Sbjct: 579 FFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLD 638
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
Y AL+ G+ + E A + F + G+TP+ + +I+ + + A Q
Sbjct: 639 VVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQ 698
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEF 367
M K + + I+ KE +L+ AL+
Sbjct: 699 EMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDL 731
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 100/240 (41%), Gaps = 34/240 (14%)
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG-----------------EPLDKRS 242
G + D V +V++ SK G+++ A E + +KL+G + L + +
Sbjct: 355 GVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHA 414
Query: 243 YG----------SMVMAYV-------RAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
YG + V+ Y G ++ L +M ++ + Y L+ G+
Sbjct: 415 YGLFDEAVEHGITNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGH 474
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
G + A + ++I G+ P+A LLI+ + G S++A+ F+ M A + P+D
Sbjct: 475 CKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTD 534
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+++ K +++ + L + + GF+ ++ F + G V+ RE
Sbjct: 535 HTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYRE 594
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/199 (20%), Positives = 84/199 (42%), Gaps = 1/199 (0%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
+ N+ ++ G+ ++ +++A G I + VT +++ + G + A
Sbjct: 392 QPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHG-ITNVVTYNILLKWLGELGKVNEACN 450
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
+E++ G SY ++++ + + G +D+ +L+ + + + + Y L+ G+
Sbjct: 451 LWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFF 510
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G+SE A VFE + A I P +IN G+ + N K G +
Sbjct: 511 KKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSI 570
Query: 347 CVALILSACEKENQLNRAL 365
I+ KE ++ AL
Sbjct: 571 TYNSIIDGFFKEGAVDSAL 589
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/237 (17%), Positives = 97/237 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + ++ Y +I G+ KK + A + L ++ RG + VT T+++ + K G+
Sbjct: 455 MVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGD 514
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A FE++ ++ +++ + G + + L Q S Y +
Sbjct: 515 SERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNS 574
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G+ G + A + + +GI+PD LI+ + + A +M+ G
Sbjct: 575 IIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKG 634
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
++ + ++ K + + A +F +L G ++ + F L +E
Sbjct: 635 MKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNME 691
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 44/235 (18%), Positives = 87/235 (37%), Gaps = 6/235 (2%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
++LE + N YT +I G+ KK + A M T ++ K G
Sbjct: 489 SILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTG 548
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ ++ G +Y S++ + + G +D + REM + Y
Sbjct: 549 RVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYT 608
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
+L+ G + A + +++ G+ D + LI+ + + A F +
Sbjct: 609 SLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDI 668
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
GL P+ ++S N + AL +L ++ M+ + C L + +G
Sbjct: 669 GLTPNTVVYNSMISGFIHLNNMEAAL----NLHQE--MIKNKVPCDLQVYTSIIG 717
>gi|410110131|gb|AFV61145.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
rehmannii]
Length = 379
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 99/209 (47%), Gaps = 4/209 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
++ E N+ Y ++ YGK ++ + A N + M+ RG + +T + ++ ++ K G L
Sbjct: 174 KNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDR 233
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A F++++ G +D+ + +M++AY RAG++ + LL E+ + + + +L
Sbjct: 234 AAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPD-NIPRDTAIHILA 292
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G G E A VF AG D + +I+ + F MR G P
Sbjct: 293 G---AGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYANVVEVFDKMRGLGYFP 349
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLE 372
+A++L+A K ++A + ++++
Sbjct: 350 DSNVIAVVLNAYGKLQXFDKANDVYMEMQ 378
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 102/237 (43%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + M+ + D T +M+ +Y + G K A++ F
Sbjct: 74 NTSSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 133
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G + SY +++ Y A + L R M + + Y +++ Y
Sbjct: 134 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 193
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P++ + +I+ + G+ +A FQ +R +G+E
Sbjct: 194 LEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILF 253
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+R + A LA G +EE +V R+
Sbjct: 254 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGA----GRIEEATYVFRQ 306
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 102/243 (41%), Gaps = 6/243 (2%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F ++ Y +I+ +GK + A + + MK G + + + + ++ MY + A
Sbjct: 36 FTPDLVAYNAMINVFGKAKLFREARSLIGEMKTAGVMPNTSSYSTLLTMYVENKKFLEAL 95
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
F E++ + LD + M+ Y + GM + L M + Y LLR Y
Sbjct: 96 SVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 155
Query: 286 SMNGNSE---GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G++E A +F +Q I + ++ Y + +KA Q M+ G+E
Sbjct: 156 ---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIE 212
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + I+S K +L+RA L G + + T+ ++R G+V + +
Sbjct: 213 PNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRL 272
Query: 403 LRE 405
L E
Sbjct: 273 LHE 275
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 60/141 (42%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D V + ++ + K + A F +K G D +Y +M+ + +A + L+
Sbjct: 4 DLVLYSNLIELSRKLCDYSKAIAIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 63
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
EM V + Y LL Y N A VF ++ D C ++I+ Y
Sbjct: 64 GEMKTAGVMPNTSSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 123
Query: 324 GQSQKAYTAFQNMRKAGLEPS 344
G +++A F MRK G+EP+
Sbjct: 124 GMAKEADKLFWGMRKMGIEPN 144
>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
Length = 754
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 98/241 (40%), Gaps = 35/241 (14%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
LL ++ Y +I G+ K+ ++ A + M+ +G + + VT + ++ K
Sbjct: 144 LLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKE 203
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM-------------- 266
+ AE ++ G + +Y ++ Y +GM + +EM
Sbjct: 204 MDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNS 263
Query: 267 ------------DAQEVYVGSEV---------YKALLRGYSMNGNSEGAQRVFEAIQFAG 305
+A++++ + Y ALL GY+ G G +F + G
Sbjct: 264 FMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEG 323
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
+ PD + LINAY G K+ F++M K G+ P + ++SA + +L+ A+
Sbjct: 324 VVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAM 383
Query: 366 E 366
E
Sbjct: 384 E 384
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 82/204 (40%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +IHGY + + M + D + K G +K A + F+ +
Sbjct: 226 YNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMV 285
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
L G D SYG+++ Y AG + + L M + V V+ L+ Y+ G +
Sbjct: 286 LKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMD 345
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
+ +FE + G+ PD + +I+A+ G+ A F +M G+ P + ++
Sbjct: 346 KSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLI 405
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
L +A E + D+ G
Sbjct: 406 QGQCNRRDLVKAKELISDMLSKGI 429
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 66/151 (43%), Gaps = 1/151 (0%)
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
T +++ Y +A + F + G D SY +++ + + G +D+ L +M
Sbjct: 120 TYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKM 179
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
+ Q + Y +L+ G + A+RV + AG+ P+ LI+ Y +G
Sbjct: 180 EEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMW 239
Query: 327 QKAYTAFQNMRKAGLEPS-DKCVALILSACE 356
+++ F+ M + L P C + + + C+
Sbjct: 240 KESVRVFKEMSSSLLVPDVGNCNSFMTALCK 270
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 71/172 (41%), Gaps = 2/172 (1%)
Query: 182 KKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKR 241
K +I+ A + +M +G D ++ ++ Y+ AG + + F + G D+
Sbjct: 270 KHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRH 329
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI 301
+ +++ AY R GM+D+ ++ +M Q V + ++ + G + A F +
Sbjct: 330 VFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHM 389
Query: 302 QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILS 353
G+ PD + + LI KA +M G+ P C+ S
Sbjct: 390 IDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPP--CIKFFTS 439
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/293 (19%), Positives = 109/293 (37%), Gaps = 42/293 (14%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
+ ++ Y ++HGY I +N M G + D+ ++ Y++ G + +
Sbjct: 290 KPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLL 349
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG-- 284
FE++ G D ++ +++ A+ R G LD M V + VY L++G
Sbjct: 350 MFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQC 409
Query: 285 ----------------------------YSMNGN--SEG----AQRVFEAIQFAGITPDA 310
S+ N EG + V + I G P+
Sbjct: 410 NRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNL 469
Query: 311 RMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLID 370
L++ Y + G ++A +M G+EP ++ K +++ AL D
Sbjct: 470 ITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRD 529
Query: 371 -LERDGFMVGKEASCTLAAWF--KRLGVVEEVEHVLREYGLR---ETYSKIPG 417
L + + + L F +R V +E+ H + E G+ TY+ + G
Sbjct: 530 MLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLG 582
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/221 (18%), Positives = 80/221 (36%), Gaps = 35/221 (15%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E +I Y ++ GY K +I +A M + V+ +++ +A +A+E
Sbjct: 501 EPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKE 560
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
F E+ G + +Y +++ R D +LL ++ + V + ++R
Sbjct: 561 MFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMF 620
Query: 287 MNGNSEGAQRVFEAIQFAGI-----------------------------------TPDAR 311
G + A+ +F AI G+ TPD+R
Sbjct: 621 KVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSR 680
Query: 312 MCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
+ +I G+ KA + K G+ P +L++
Sbjct: 681 ILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLI 721
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 48/272 (17%), Positives = 96/272 (35%), Gaps = 35/272 (12%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK------ 222
N+ + ++ GY ++ A L +M+ G D T +V Y K G +
Sbjct: 468 NLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLF 527
Query: 223 -----------------------------MAEETFEEIKLLGEPLDKRSYGSMVMAYVRA 253
+A+E F E+ G + +Y +++ R
Sbjct: 528 RDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRN 587
Query: 254 GMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
D +LL ++ + V + ++R G + A+ +F AI G+ P
Sbjct: 588 NCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTY 647
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
++I + A F +M K+ P + + I+ + ++ +A +L +++
Sbjct: 648 RVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDK 707
Query: 374 DGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
G + + L F G E +L E
Sbjct: 708 KGILPEATTTSLLIYLFSVNGKYREYIKLLPE 739
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.134 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,220,989,273
Number of Sequences: 23463169
Number of extensions: 238121545
Number of successful extensions: 634176
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4832
Number of HSP's successfully gapped in prelim test: 4816
Number of HSP's that attempted gapping in prelim test: 566759
Number of HSP's gapped (non-prelim): 47973
length of query: 423
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 278
effective length of database: 8,957,035,862
effective search space: 2490055969636
effective search space used: 2490055969636
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 78 (34.7 bits)