BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014507
(423 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LPC4|PPR1_ARATH Pentatricopeptide repeat-containing protein At1g01970
OS=Arabidopsis thaliana GN=At1g01970 PE=2 SV=1
Length = 409
Score = 465 bits (1196), Expect = e-130, Method: Compositional matrix adjust.
Identities = 219/347 (63%), Positives = 281/347 (80%), Gaps = 3/347 (0%)
Query: 63 MGKTQVKDD---TSMFTWIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETGN 119
+G+ K+D + F W +G N+TEEQ +AI++ P KM+KRC+A ++QIIC SPE G+
Sbjct: 55 IGEVVEKEDAEQSRSFNWADVGLNLTEEQDEAITRIPIKMSKRCQALMRQIICFSPEKGS 114
Query: 120 LSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHG 179
DLL AW+R M P RADWL++LK+LK ++ P Y++VAE +LL++SFEAN RDYTKIIH
Sbjct: 115 FCDLLGAWLRRMNPIRADWLSILKELKNLDSPFYIKVAEFSLLQDSFEANARDYTKIIHY 174
Query: 180 YGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLD 239
YGK Q+++AE TLL+MK RGF+ DQVTLT MV +YSKAG K+AEETF EIKLLGEPLD
Sbjct: 175 YGKLNQVEDAERTLLSMKNRGFLIDQVTLTAMVQLYSKAGCHKLAEETFNEIKLLGEPLD 234
Query: 240 KRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFE 299
RSYGSM+MAY+RAG+ ++GE LLREMD+QE+ G EVYKALLR YSM G++EGA+RVF+
Sbjct: 235 YRSYGSMIMAYIRAGVPEKGESLLREMDSQEICAGREVYKALLRDYSMGGDAEGAKRVFD 294
Query: 300 AIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKEN 359
A+Q AGITPD ++C LLINAY ++GQSQ A AF+NMRKAG++ +DKCVAL+L+A EKE
Sbjct: 295 AVQIAGITPDVKLCGLLINAYSVSGQSQNARLAFENMRKAGIKATDKCVALVLAAYEKEE 354
Query: 360 QLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREY 406
+LN AL FL++LE+D M+GKEAS LA WFK+LGVVEEVE +LRE+
Sbjct: 355 KLNEALGFLVELEKDSIMLGKEASAVLAQWFKKLGVVEEVELLLREF 401
>sp|Q940Z1|PPR51_ARATH Pentatricopeptide repeat-containing protein At1g19525
OS=Arabidopsis thaliana GN=At1g19525 PE=2 SV=2
Length = 316
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/209 (40%), Positives = 122/209 (58%), Gaps = 1/209 (0%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M + G D +T T +V MYSK+GN + A E FE +K G D++ Y +M++ YV AG
Sbjct: 1 MSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGK 60
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITP-DARMCA 314
GE L++EM A+E+ EVY ALLR Y+ G++ GA + ++Q+A P +
Sbjct: 61 PKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSFEAYS 120
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
L + AY AGQ KA + F MRK G +P DKC+A ++ A + EN L++AL L+ LE+D
Sbjct: 121 LFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEKD 180
Query: 375 GFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
G +G L W LG++EE E +L
Sbjct: 181 GIEIGVITYTVLVDWMANLGLIEEAEQLL 209
Score = 41.6 bits (96), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 69/158 (43%), Gaps = 12/158 (7%)
Query: 154 LQVAELALLEESFEANIRDYTKIIHGYGK---KMQIQNAENTLLAMKRRGFICDQVTLTV 210
+Q EL EE + A +R Y ++ G +Q A + L+ + ++
Sbjct: 71 MQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSFE---------AYSL 121
Query: 211 MVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE 270
V Y KAG + A+ F+E++ LG D + ++V AY LD+ LL +++
Sbjct: 122 FVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEKDG 181
Query: 271 VYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITP 308
+ +G Y L+ + G E A+++ I G P
Sbjct: 182 IEIGVITYTVLVDWMANLGLIEEAEQLLVKISQLGEAP 219
>sp|Q0WMY5|PP365_ARATH Pentatricopeptide repeat-containing protein At5g04810,
chloroplastic OS=Arabidopsis thaliana GN=PPR4 PE=1 SV=1
Length = 952
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 126/265 (47%), Gaps = 16/265 (6%)
Query: 119 NLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFE--------ANI 170
N +++A+ + KP R ++ ++K Y + ++ E+FE
Sbjct: 293 NWQAVISAFEKISKPSRTEFGLMVK--------FYGRRGDMHRARETFERMRARGITPTS 344
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
R YT +IH Y + A + + MK G VT +V+V +SKAG+ + A+ F+E
Sbjct: 345 RIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDE 404
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
K + + L+ YG ++ A+ + ++R E L+REM+ + + +Y ++ GY+M +
Sbjct: 405 AKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVAD 464
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
+ VF+ ++ G TP LIN Y G+ KA + M++ G++ + K ++
Sbjct: 465 EKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSM 524
Query: 351 ILSACEKENQLNRALEFLIDLERDG 375
+++ K A D+ ++G
Sbjct: 525 MINGFVKLKDWANAFAVFEDMVKEG 549
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 102/230 (44%), Gaps = 1/230 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+ + +I+G +K Q++ A L M G ++ T T ++ Y+ G+ A E F
Sbjct: 623 TVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYF 682
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ G +D +Y +++ A ++G + + +EM A+ + S VY L+ G++
Sbjct: 683 TRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARR 742
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G+ A + + ++ G+ PD I+A AG +A + M G++P+ K
Sbjct: 743 GDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTY 802
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEA-SCTLAAWFKRLGVVE 397
++ + + +AL +++ G K C L + R + E
Sbjct: 803 TTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAE 852
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 98/228 (42%)
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
R + IIHGY K ++ + M+R G + T ++ + ++ A E +E
Sbjct: 590 RTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDE 649
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
+ L G ++ +Y ++ Y G + + + + V Y+ALL+ +G
Sbjct: 650 MTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGR 709
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
+ A V + + I ++ + +LI+ + G +A Q M+K G++P
Sbjct: 710 MQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTS 769
Query: 351 ILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
+SAC K +NRA + + ++E G + TL + R + E+
Sbjct: 770 FISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEK 817
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 88/218 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E F + Y +I+ Y K +I A MK G + T ++M+ + K +
Sbjct: 475 LKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKD 534
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A FE++ G D Y +++ A+ G +DR ++EM + +
Sbjct: 535 WANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMP 594
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ GY+ +G+ + VF+ ++ G P LIN Q +KA M AG
Sbjct: 595 IIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAG 654
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMV 378
+ ++ I+ +A E+ L+ +G V
Sbjct: 655 VSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDV 692
Score = 58.9 bits (141), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 77/181 (42%), Gaps = 1/181 (0%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
AN YTKI+ GY A ++ G D T ++ K+G ++ A
Sbjct: 657 ANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAV 716
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
+E+ P + Y ++ + R G + L+++M + V Y + + S
Sbjct: 717 TKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSK 776
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G+ A + E ++ G+ P+ + LI + A +KA + ++ M+ G++P DK
Sbjct: 777 AGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKP-DKA 835
Query: 348 V 348
V
Sbjct: 836 V 836
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 85/207 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y KII+ + + ++ AE + M+ G M+ Y+ + K F
Sbjct: 413 NASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVF 472
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ +K G +YG ++ Y + G + + + R M + V + Y ++ G+
Sbjct: 473 KRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKL 532
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
+ A VFE + G+ PD + +I+A+ G +A + M+K P+ +
Sbjct: 533 KDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTF 592
Query: 349 ALILSACEKENQLNRALEFLIDLERDG 375
I+ K + R+LE + R G
Sbjct: 593 MPIIHGYAKSGDMRRSLEVFDMMRRCG 619
Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 88/201 (43%), Gaps = 7/201 (3%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E + +I Y ++ K ++Q+A M R + +++ +++ G+
Sbjct: 685 LQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGD 744
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + +++K G D +Y S + A +AG ++R + EM+A V + Y
Sbjct: 745 VWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTT 804
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAY------TAFQ 334
L++G++ E A +E ++ GI PD + L+ + +AY T +
Sbjct: 805 LIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICK 864
Query: 335 NMRKAGLEPSDKCVALILSAC 355
M +AGL D A+ S C
Sbjct: 865 EMVEAGL-IVDMGTAVHWSKC 884
>sp|Q9FLD8|PP408_ARATH Pentatricopeptide repeat-containing protein At5g39980,
chloroplastic OS=Arabidopsis thaliana GN=At5g39980 PE=2
SV=1
Length = 678
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 124/285 (43%), Gaps = 31/285 (10%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ E N+ Y +I YGK M+ + A N + M+ RG + +T + ++ ++ KAG L
Sbjct: 394 KDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDR 453
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM----------------- 266
A F++++ G +D+ Y +M++AY R G++ + LL E+
Sbjct: 454 AATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAK 513
Query: 267 -----DAQEVYVGS---------EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARM 312
+A V+ + V+ ++ YS N VFE ++ AG PD+ +
Sbjct: 514 AGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNV 573
Query: 313 CALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLE 372
A+++NAY + +KA T ++ M++ G D+ +LS + LE
Sbjct: 574 IAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLE 633
Query: 373 RDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRETYSKIPG 417
D + KE +AA ++R + + V+ R PG
Sbjct: 634 SDPNVNSKELHLVVAALYERADKLNDASRVMNRMRERGILKPFPG 678
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/359 (19%), Positives = 142/359 (39%), Gaps = 54/359 (15%)
Query: 98 KMTKRCKAFVKQI--ICVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQ 155
K+ + + +K++ V P T + S LL+ +V K A L+V ++K + L L
Sbjct: 274 KLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEA--LSVFAEMKEVNCALDLT 331
Query: 156 V--------AELALLEES-----------FEANIRDYTKIIHGYGKKMQIQNAENTLLAM 196
+L +++E+ E N+ Y I+ YG+ A + M
Sbjct: 332 TCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLM 391
Query: 197 KRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGML 256
+R+ + VT M+ +Y K + A +E++ G + +Y +++ + +AG L
Sbjct: 392 QRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKL 451
Query: 257 DRGEVLLREMDAQEVYVGSEVYKALLRGY------------------------------- 285
DR L +++ + V + +Y+ ++ Y
Sbjct: 452 DRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITIL 511
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
+ G +E A VF +G D + +IN Y + F+ MR AG P
Sbjct: 512 AKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDS 571
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
+A++L+A K+ + +A +++ +G + E + + + E VE + +
Sbjct: 572 NVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQ 630
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 103/237 (43%), Gaps = 4/237 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y+ ++ Y + + A + MK D T +M+ +Y + +K A+ F
Sbjct: 294 NTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLF 353
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ + + SY +++ Y A + L R M +++ Y +++ Y
Sbjct: 354 WSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKT 413
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A + + +Q GI P+A + +I+ + AG+ +A T FQ +R +G+E
Sbjct: 414 MEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLY 473
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A E+ + A L +L+ + +E + T+ A + G EE V R+
Sbjct: 474 QTMIVAYERVGLMGHAKRLLHELKLPD-NIPRETAITILA---KAGRTEEATWVFRQ 526
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 107/254 (42%), Gaps = 9/254 (3%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+ YGK + A + M G + + V+ + ++ +Y + A F E+K
Sbjct: 263 YNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMK 322
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVL---LREMDAQEVYVGSEVYKALLRGYSMNG 289
+ LD + M+ Y + M+ + L LR+MD + V Y +LR Y
Sbjct: 323 EVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVS---YNTILRVYGEAE 379
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
A +F +Q I + +I Y + +KA Q M+ G+EP+ +
Sbjct: 380 LFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYS 439
Query: 350 LILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLR 409
I+S K +L+RA L G + + T+ ++R+G++ + +L E L
Sbjct: 440 TIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLP 499
Query: 410 ETYSKIPGSRSIAL 423
+ IP +I +
Sbjct: 500 DN---IPRETAITI 510
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 86/195 (44%), Gaps = 5/195 (2%)
Query: 150 HPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLT 209
H L+ ++ + AL + + Y+ +I +GK+ +A + L M++ D V +
Sbjct: 175 HGLFDEMRQRALAPDRY-----TYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYS 229
Query: 210 VMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQ 269
++ + + + A F +K G D +Y SM+ Y +A + +L++EM+
Sbjct: 230 NLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEA 289
Query: 270 EVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
V + Y LL Y N A VF ++ D C ++I+ Y ++A
Sbjct: 290 GVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEA 349
Query: 330 YTAFQNMRKAGLEPS 344
F ++RK +EP+
Sbjct: 350 DRLFWSLRKMDIEPN 364
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 76/170 (44%), Gaps = 8/170 (4%)
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
+A +A F+E++ D+ +Y +++ ++ + GM D L++M+ V
Sbjct: 167 RAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLV 226
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
+Y L+ + A +F ++ +GITPD +IN Y A ++A + M
Sbjct: 227 LYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEM 286
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
+AG+ P+ + +LS + ++ AL ++ KE +C L
Sbjct: 287 NEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEM--------KEVNCAL 328
>sp|O64624|PP163_ARATH Pentatricopeptide repeat-containing protein At2g18940
OS=Arabidopsis thaliana GN=At2g18940 PE=2 SV=1
Length = 822
Score = 82.0 bits (201), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 102/210 (48%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M+ +G D+ T + ++ ++ G L+ A+E F E+K G +Y +++ + +AG+
Sbjct: 272 MRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGV 331
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
+L+EM+ S Y L+ Y G S+ A V E + G+ P+A
Sbjct: 332 YTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTT 391
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+I+AY AG+ +A F +M++AG P+ +LS K+++ N ++ L D++ +G
Sbjct: 392 VIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNG 451
Query: 376 FMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ T+ A G+ + V V RE
Sbjct: 452 CSPNRATWNTMLALCGNKGMDKFVNRVFRE 481
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 84/196 (42%), Gaps = 18/196 (9%)
Query: 212 VVMYSKAGNLKMAEETFE-EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE 270
+V+ S +G LK+ + E +++LG R LL ++ QE
Sbjct: 162 LVLSSNSGALKLDHQVIEIFVRILG----------------RESQYSVAAKLLDKIPLQE 205
Query: 271 VYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS-QKA 329
+ Y +L YS G E A +FE ++ G +P ++++ + G+S +K
Sbjct: 206 YLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKI 265
Query: 330 YTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAW 389
MR GL+ + + +LSAC +E L A EF +L+ G+ G L
Sbjct: 266 LGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQV 325
Query: 390 FKRLGVVEEVEHVLRE 405
F + GV E VL+E
Sbjct: 326 FGKAGVYTEALSVLKE 341
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 100/227 (44%), Gaps = 4/227 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG-NLKMAEET 227
++R YT I+H Y + + + A + MK G VT V++ ++ K G + +
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGV 268
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
+E++ G D+ + +++ A R G+L + E+ + G+ Y ALL+ +
Sbjct: 269 LDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGK 328
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G A V + ++ D+ L+ AY AG S++A + M K G+ P+
Sbjct: 329 AGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAIT 388
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
++ A K + + AL+ ++ G + +CT A LG
Sbjct: 389 YTTVIDAYGKAGKEDEALKLFYSMKEAGCVPN---TCTYNAVLSLLG 432
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/244 (19%), Positives = 110/244 (45%), Gaps = 12/244 (4%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN---LK 222
F A + Y +++ +K ++ EN + MK +GF + + ++M+ Y+K GN ++
Sbjct: 522 FNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIE 581
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGML---DRGEVLLREMDAQEVYVGSEVYK 279
E +E ++ + R ++++A + L +R L ++ + V ++
Sbjct: 582 RIENRIKEGQIFPSWMLLR---TLLLANFKCRALAGSERAFTLFKKHGYKPDMV---IFN 635
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
++L ++ N + A+ + E+I+ G++PD L++ Y G+ KA + + K+
Sbjct: 636 SMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKS 695
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEV 399
L+P ++ + + A+ L ++ G T + + +G+ E+
Sbjct: 696 QLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEI 755
Query: 400 EHVL 403
E V+
Sbjct: 756 EDVI 759
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/183 (19%), Positives = 77/183 (42%)
Query: 186 IQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGS 245
+ +E K+ G+ D V M+ ++++ AE E I+ G D +Y S
Sbjct: 612 LAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNS 671
Query: 246 MVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAG 305
++ YVR G + E +L+ ++ ++ Y +++G+ G + A R+ + G
Sbjct: 672 LMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERG 731
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
I P ++ Y G + + M K P++ +++ + + + A+
Sbjct: 732 IRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAM 791
Query: 366 EFL 368
+F+
Sbjct: 792 DFV 794
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/246 (19%), Positives = 98/246 (39%), Gaps = 3/246 (1%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E S A+ Y +++ Y + + A + M ++G + + +T T ++ Y KAG
Sbjct: 344 ENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKED 403
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A + F +K G + +Y +++ + + +L +M + + +L
Sbjct: 404 EALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML 463
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G + RVF ++ G PD LI+AY G A + M +AG
Sbjct: 464 ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFN 523
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGV---VEEV 399
+L+A ++ + D++ GF + + + + + G +E +
Sbjct: 524 ACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERI 583
Query: 400 EHVLRE 405
E+ ++E
Sbjct: 584 ENRIKE 589
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 67/166 (40%), Gaps = 14/166 (8%)
Query: 178 HGYGKKMQIQN--------------AENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
HGY M I N AE L +++ G D VT ++ MY + G
Sbjct: 625 HGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWK 684
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
AEE + ++ D SY +++ + R G++ +L EM + + Y +
Sbjct: 685 AEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVS 744
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
GY+ G + V E + P+ ++++ Y AG+ +A
Sbjct: 745 GYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEA 790
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/273 (18%), Positives = 103/273 (37%)
Query: 133 PRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENT 192
P RA W +L ++ + FE + + +I YG+ +A
Sbjct: 454 PNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKM 513
Query: 193 LLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVR 252
M R GF T ++ ++ G+ + E ++K G + SY M+ Y +
Sbjct: 514 YGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAK 573
Query: 253 AGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARM 312
G E + + +++ + + LL G++R F + G PD +
Sbjct: 574 GGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVI 633
Query: 313 CALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLE 372
+++ + +A +++R+ GL P ++ + + +A E L LE
Sbjct: 634 FNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLE 693
Query: 373 RDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ + T+ F R G+++E +L E
Sbjct: 694 KSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSE 726
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/238 (18%), Positives = 87/238 (36%), Gaps = 35/238 (14%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKL 233
+ ++ ++ ++ A+ +K G+ VT ++ ++ KAG A +E++
Sbjct: 285 STVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEE 344
Query: 234 LGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEG 293
P D +Y +V AYVRAG ++ M + V + Y ++ Y G +
Sbjct: 345 NSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDE 404
Query: 294 AQRVFEAIQFAGITPDA---------------------RMCALLINAYQ----------- 321
A ++F +++ AG P+ +C + N
Sbjct: 405 ALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLA 464
Query: 322 ---MAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
G + F+ M+ G EP ++SA + A + ++ R GF
Sbjct: 465 LCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGF 522
>sp|Q9SF38|PP222_ARATH Pentatricopeptide repeat-containing protein At3g09650,
chloroplastic OS=Arabidopsis thaliana GN=HCF152 PE=2
SV=1
Length = 778
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 6/185 (3%)
Query: 157 AELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKR---RGFICDQVTLTVMVV 213
E LL + F + R YT ++ GY K ++ + L AM+R R D+VT T +V
Sbjct: 401 GEPPLLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVS 460
Query: 214 MYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYV 273
+ AG + A + E+ +G P ++ +Y ++ Y + +DR E LLREM ++ +
Sbjct: 461 AFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREM-TEDAGI 519
Query: 274 GSEV--YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
+V Y ++ G + +S GA F ++ GI P L+ A+ M+GQ + A
Sbjct: 520 EPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANR 579
Query: 332 AFQNM 336
F M
Sbjct: 580 VFDEM 584
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 100/250 (40%), Gaps = 31/250 (12%)
Query: 156 VAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR-GFICDQVTLTVMV-- 212
+AE+A + AN Y ++ GY K++QI AE+ L M G D V+ +++
Sbjct: 475 LAEMARM--GVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDG 532
Query: 213 --VMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM-DAQ 269
++ AG L F E++ G K SY +++ A+ +G + EM +
Sbjct: 533 CILIDDSAGALAF----FNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDP 588
Query: 270 EVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKA 329
V V + L+ GY G E AQRV ++ G P+ L N A + A
Sbjct: 589 RVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDA 648
Query: 330 YTAFQNMRK-------------------AGLEPSDKCVALILSACEKENQLNRALEFLID 370
++ +++ L+P + + + C + +ALE +
Sbjct: 649 LLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIAC 708
Query: 371 LERDGFMVGK 380
+E +G K
Sbjct: 709 MEENGIPPNK 718
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 110/246 (44%), Gaps = 2/246 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L++ + N+ Y +I+G +I A + M G + +T ++ + K
Sbjct: 322 MLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDM 381
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
LK A + F +K G R Y ++ AY + G +D G L EM+ + + Y
Sbjct: 382 LKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNC 441
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G NGN E A+++F+ + G+ PD +L+ Y G+S+KA + M K G
Sbjct: 442 LIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMG 500
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCT-LAAWFKRLGVVEEV 399
L+P +++ KE L A +E++ + AS L + + G +E+
Sbjct: 501 LKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDA 560
Query: 400 EHVLRE 405
+L E
Sbjct: 561 NMLLNE 566
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 91/206 (44%), Gaps = 3/206 (1%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVR--- 252
M RR + T V++ K G + A + E++K+ G + SY +++ Y +
Sbjct: 214 MIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGG 273
Query: 253 AGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARM 312
G + + + +L+EM +V + L+ G+ + N G+ +VF+ + + P+
Sbjct: 274 NGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVIS 333
Query: 313 CALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLE 372
LIN G+ +A + M AG++P+ +++ K + L AL+ ++
Sbjct: 334 YNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVK 393
Query: 373 RDGFMVGKEASCTLAAWFKRLGVVEE 398
G + L + +LG +++
Sbjct: 394 GQGAVPTTRMYNMLIDAYCKLGKIDD 419
Score = 38.1 bits (87), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 63/147 (42%), Gaps = 2/147 (1%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
E ++ Y +I G + I+ A+ + +G + D VT +++ Y + G +
Sbjct: 430 EGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRK 488
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE-VYVGSEVYKALL 282
A +E+ +G +Y ++ Y + G L + +M+ + + + Y LL
Sbjct: 489 AAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLL 548
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPD 309
+GYS G E A + + G+ P+
Sbjct: 549 QGYSQKGKLEDANMLLNEMLEKGLVPN 575
Score = 37.0 bits (84), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 36/201 (17%), Positives = 82/201 (40%), Gaps = 7/201 (3%)
Query: 168 ANIRDYTKI---IHGYGKKMQIQNAENTLLAMKRRGFIC-DQVTLTVMVVMYSKAGNLKM 223
AN + Y+KI + G+ + + A+ +C + + ++V+ Y+ ++
Sbjct: 112 ANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFEL 171
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
E F+ G L S +++A ++ E + +EM +++ + ++
Sbjct: 172 GFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVIN 231
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTA---FQNMRKAG 340
G A+ V E ++ G +P+ LI+ Y G + K Y A + M +
Sbjct: 232 ALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVEND 291
Query: 341 LEPSDKCVALILSACEKENQL 361
+ P+ +++ K++ L
Sbjct: 292 VSPNLTTFNILIDGFWKDDNL 312
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 91/202 (45%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ E N+ Y +I+G ++ +++ L M RRG+ D+VT ++ Y K GN
Sbjct: 269 KGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQ 328
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A E+ G +Y S++ + +AG ++R L +M + + Y L+
Sbjct: 329 ALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVD 388
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
G+S G A RV + G +P LIN + + G+ + A ++M++ GL P
Sbjct: 389 GFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSP 448
Query: 344 SDKCVALILSACEKENQLNRAL 365
+ +LS + ++ AL
Sbjct: 449 DVVSYSTVLSGFCRSYDVDEAL 470
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N R YT ++ G+ +K + A L M GF VT ++ + G ++ A
Sbjct: 379 NERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVL 438
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++K G D SY +++ + R+ +D + REM + + + Y +L++G+
Sbjct: 439 EDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQ 498
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
++ A ++E + G+ PD LINAY M G +KA M + G+ P
Sbjct: 499 RRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTY 558
Query: 349 ALILSACEKENQLNRALEFLIDL 371
+++++ K+++ A L+ L
Sbjct: 559 SVLINGLNKQSRTREAKRLLLKL 581
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 98/237 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I GY K +I + L +M +G + ++ V++ + G +K
Sbjct: 239 NVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVL 298
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E+ G LD+ +Y +++ Y + G + V+ EM + Y +L+
Sbjct: 299 TEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKA 358
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
GN A + ++ G+ P+ R L++ + G +AY + M G PS
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+++ ++ A+ L D++ G + T+ + F R V+E V RE
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKRE 475
Score = 68.9 bits (167), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 88/186 (47%), Gaps = 1/186 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I GY K+ A M R G +T T ++ KAGN+ A E ++++
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ G ++R+Y ++V + + G ++ +LREM+ Y AL+ G+ + G E
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV-ALI 351
A V E ++ G++PD + +++ + + +A + M + G++P +LI
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Query: 352 LSACEK 357
CE+
Sbjct: 493 QGFCEQ 498
Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 93/224 (41%), Gaps = 2/224 (0%)
Query: 183 KMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRS 242
K I AEN M + T +++ + AGN+ +A F++++ G + +
Sbjct: 183 KRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVT 242
Query: 243 YGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQ 302
Y +++ Y + +D G LLR M + + Y ++ G G + V +
Sbjct: 243 YNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMN 302
Query: 303 FAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS-DKCVALILSACEKENQL 361
G + D LI Y G +A M + GL PS +LI S C+ N +
Sbjct: 303 RRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGN-M 361
Query: 362 NRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
NRA+EFL + G + TL F + G + E VLRE
Sbjct: 362 NRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLRE 405
Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 88/216 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+LE N+ Y +I G+ I A M+ +G + + VT ++ Y K
Sbjct: 196 MLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK 255
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ + + L G + SY ++ R G + +L EM+ + + Y
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNT 315
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L++GY GN A + + G+TP LI++ AG +A MR G
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG 375
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
L P+++ ++ ++ +N A L ++ +GF
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGF 411
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 111/260 (42%), Gaps = 15/260 (5%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E+ + + Y+ +I G+ ++ + + A + M R G D+ T T ++ Y G+
Sbjct: 476 MVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGD 535
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK- 279
L+ A + E+ G D +Y ++ + + LL ++ +E Y
Sbjct: 536 LEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHT 595
Query: 280 --------------ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQ 325
+L++G+ M G A +VFE++ PD ++I+ + AG
Sbjct: 596 LIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGD 655
Query: 326 SQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCT 385
+KAYT ++ M K+G V ++ A KE ++N ++ + R + E +
Sbjct: 656 IRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKV 715
Query: 386 LAAWFKRLGVVEEVEHVLRE 405
L R G ++ V VL E
Sbjct: 716 LVEINHREGNMDVVLDVLAE 735
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 95/222 (42%)
Query: 156 VAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
V +L ++ YT +IH K + A L M+ RG ++ T T +V +
Sbjct: 331 VMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGF 390
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
S+ G + A E+ G +Y +++ + G ++ +L +M + +
Sbjct: 391 SQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDV 450
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
Y +L G+ + + + A RV + GI PD + LI + ++++A ++
Sbjct: 451 VSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEE 510
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
M + GL P + +++A E L +AL+ ++ G +
Sbjct: 511 MLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552
>sp|Q9LYT2|PP287_ARATH Pentatricopeptide repeat-containing protein At3g59040
OS=Arabidopsis thaliana GN=At3g59040 PE=2 SV=2
Length = 583
Score = 78.6 bits (192), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 10/211 (4%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ YT ++ YG+ + NAE M+ G +T +++ + + K AEE F
Sbjct: 173 NVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVF 232
Query: 229 EEIKLLGE---PL--DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
E LL E PL D++ Y M+ Y +AG ++ + M + V + Y +L+
Sbjct: 233 E--TLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLM- 289
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
S + + ++++ +Q + I PD ALLI AY A + ++A + F+ M AG+ P
Sbjct: 290 --SFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRP 347
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERD 374
+ K ++L A + +A + RD
Sbjct: 348 THKAYNILLDAFAISGMVEQAKTVFKSMRRD 378
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 86/191 (45%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M+R D V+ +++ Y +A + A FEE+ G ++Y ++ A+ +GM
Sbjct: 305 MQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGM 364
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
+++ + + + M ++ Y +L Y + EGA++ F+ I+ G P+
Sbjct: 365 VEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGT 424
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
LI Y A +K ++ MR +G++ + + I+ A + AL + ++E G
Sbjct: 425 LIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCG 484
Query: 376 FMVGKEASCTL 386
++A L
Sbjct: 485 VPPDQKAKNVL 495
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 67/143 (46%), Gaps = 3/143 (2%)
Query: 205 QVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLR 264
++ +++ Y K GN AE + +G + SY +++ +Y R G + E + R
Sbjct: 139 EIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFR 198
Query: 265 EMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI---QFAGITPDARMCALLINAYQ 321
M + + Y+ +L+ + + A+ VFE + + + + PD +M ++I Y+
Sbjct: 199 RMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYK 258
Query: 322 MAGQSQKAYTAFQNMRKAGLEPS 344
AG +KA F +M G+ S
Sbjct: 259 KAGNYEKARKVFSSMVGKGVPQS 281
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 3/126 (2%)
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ Y GN GA+RV + G TP+ L+ +Y G+ A F+ M+ +G
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 341 LEPSDKCVALILSACEKENQLNRA---LEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
EPS +IL + ++ A E L+D ++ ++ + +K+ G E
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 264
Query: 398 EVEHVL 403
+ V
Sbjct: 265 KARKVF 270
Score = 35.4 bits (80), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 36/79 (45%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ FE NI Y +I GY K ++ M+ G +Q LT ++ + N
Sbjct: 413 DGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGS 472
Query: 224 AEETFEEIKLLGEPLDKRS 242
A ++E++ G P D+++
Sbjct: 473 ALGWYKEMESCGVPPDQKA 491
>sp|Q9LR67|PPR9_ARATH Pentatricopeptide repeat-containing protein At1g03560,
mitochondrial OS=Arabidopsis thaliana GN=At1g03560 PE=2
SV=1
Length = 660
Score = 78.6 bits (192), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 98/243 (40%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E E + Y +++G M + +AE M+ D VT M+ Y KAG +
Sbjct: 215 ENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQ 274
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A E +++ G DK +Y +M+ A L +EMD + + V + ++
Sbjct: 275 KAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVI 334
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G G VFE + G P+ + +LI+ Y +G + A M G +
Sbjct: 335 GGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFK 394
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P +++++ K ++ AL++ DG + +L + G V+E E +
Sbjct: 395 PDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERL 454
Query: 403 LRE 405
E
Sbjct: 455 FEE 457
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 102/225 (45%), Gaps = 3/225 (1%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + + N+ YT +I GY K +++A L M GF D VT +V+V K G
Sbjct: 353 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 412
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ A + F + G ++ Y S++ +AG +D E L EM + S Y A
Sbjct: 413 VEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNA 472
Query: 281 LLRGYSMNGNSEGAQRVFEAI-QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L+ ++ + + A +F+ + + G +L++ ++++A + M
Sbjct: 473 LIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDK 532
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASC 384
G+ P+ C + + ++ RA + L +L G ++ +A+C
Sbjct: 533 GITPTAACFRALSTGLCLSGKVARACKILDELAPMGVIL--DAAC 575
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 85/207 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I Y +I GY K Q Q A L M+ RG D++T M+ + +
Sbjct: 256 DIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALY 315
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+ G + ++ ++ + G L+ G + M + +Y L+ GY+ +
Sbjct: 316 QEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKS 375
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G+ E A R+ + G PD ++++N G+ ++A F R GL +
Sbjct: 376 GSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFY 435
Query: 349 ALILSACEKENQLNRALEFLIDLERDG 375
+ ++ K +++ A ++ G
Sbjct: 436 SSLIDGLGKAGRVDEAERLFEEMSEKG 462
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 65/153 (42%)
Query: 230 EIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNG 289
EIK P+ + +++ ++ + GM++ + R+M + Y L+ G
Sbjct: 177 EIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAM 236
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
+ A+RVFE ++ I PD +I Y AGQ+QKA ++M G E
Sbjct: 237 FVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYM 296
Query: 350 LILSACEKENQLNRALEFLIDLERDGFMVGKEA 382
++ AC ++ + +++ G V A
Sbjct: 297 TMIQACYADSDFGSCVALYQEMDEKGIQVPPHA 329
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 102/247 (41%), Gaps = 43/247 (17%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++E F+ ++ Y+ +++G K +++ A + + G + + + ++ KAG
Sbjct: 388 MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGR 447
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE-----VYVGS 275
+ AE FEE+ G D Y +++ A+ + +D L + M+ +E VY
Sbjct: 448 VDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYT-- 505
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDA-----------------RMCALL-- 316
Y LL G +E A ++++ + GITP A R C +L
Sbjct: 506 --YTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDE 563
Query: 317 ---------------INAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQL 361
IN AG+ ++A + + G E + ++++A K +
Sbjct: 564 LAPMGVILDAACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKA 623
Query: 362 NRALEFL 368
+ A++ +
Sbjct: 624 DLAMKLM 630
Score = 38.5 bits (88), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 38/202 (18%), Positives = 75/202 (37%), Gaps = 3/202 (1%)
Query: 206 VTLTVMVVMYSKAGNLKMAEE---TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVL 262
+T++ + G L M EE + ++K G +Y ++ V A +D E +
Sbjct: 185 MTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERV 244
Query: 263 LREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQM 322
M++ + Y +++GY G ++ A ++ G D +I A
Sbjct: 245 FEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYA 304
Query: 323 AGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEA 382
+Q M + G++ +L++ KE +LN ++ R G
Sbjct: 305 DSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAI 364
Query: 383 SCTLAAWFKRLGVVEEVEHVLR 404
L + + G VE+ +L
Sbjct: 365 YTVLIDGYAKSGSVEDAIRLLH 386
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 101/217 (46%), Gaps = 4/217 (1%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
+ NI Y I++G K I+ A + + G D VT T ++ Y K+G + A+E
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 547
Query: 227 TFEEIKLLGEPLDKR--SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
+E +LG+ L ++ ++ + GML+ GE LL M A+ + + + +L++
Sbjct: 548 ILKE--MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQ 605
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
Y + N + A +++ + G+ PD + L+ + A ++A+ FQ M+ G S
Sbjct: 606 YCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVS 665
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDGFMVGKE 381
++++ K + A E + R+G KE
Sbjct: 666 VSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKE 702
Score = 75.5 bits (184), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 110/249 (44%), Gaps = 1/249 (0%)
Query: 159 LALLE-ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSK 217
L L+E + + ++ Y+ +++GY + ++ + MKR+G + ++ + +
Sbjct: 269 LLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCR 328
Query: 218 AGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
L AEE F E+ G D Y +++ + + G + EM ++++
Sbjct: 329 ICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLT 388
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y A++ G+ G+ A ++F + G+ PD+ LIN Y AG + A+ +M
Sbjct: 389 YTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI 448
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
+AG P+ ++ KE L+ A E L ++ + G ++ + G +E
Sbjct: 449 QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 508
Query: 398 EVEHVLREY 406
E ++ E+
Sbjct: 509 EAVKLVGEF 517
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 83/197 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +IH + +I+ A + LL M+ +G+ D ++ + +V Y + G L +
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E +K G + YGS++ R L E EM Q + + VY L+ G+
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G+ A + F + ITPD +I+ + G +A F M GLEP
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 349 ALILSACEKENQLNRAL 365
+++ K + A
Sbjct: 425 TELINGYCKAGHMKDAF 441
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 103/260 (39%), Gaps = 8/260 (3%)
Query: 152 LYLQVAELALLEESFEANIRD--------YTKIIHGYGKKMQIQNAENTLLAMKRRGFIC 203
L ++ +LA EE+F IR YT +I G+ K+ I+ A M R
Sbjct: 325 LLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITP 384
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D +T T ++ + + G++ A + F E+ G D ++ ++ Y +AG + +
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMA 323
M Y L+ G G+ + A + + G+ P+ ++N +
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 324 GQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEAS 383
G ++A AGL ++ A K ++++A E L ++ G
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564
Query: 384 CTLAAWFKRLGVVEEVEHVL 403
L F G++E+ E +L
Sbjct: 565 NVLMNGFCLHGMLEDGEKLL 584
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 113/274 (41%), Gaps = 38/274 (13%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE-- 230
+T++I+GY K +++A M + G + VT T ++ K G+L A E E
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 231 ---------------------------IKLLGE------PLDKRSYGSMVMAYVRAGMLD 257
+KL+GE D +Y +++ AY ++G +D
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 543
Query: 258 RGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
+ + +L+EM + + + L+ G+ ++G E +++ + GI P+A L+
Sbjct: 544 KAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
Y + + A +++M G+ P K ++ K + A +++ GF
Sbjct: 604 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFS 663
Query: 378 VGKEA-SCTLAAWFKRLGVVE--EVEHVLREYGL 408
V S + + KR +E EV +R GL
Sbjct: 664 VSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 67/152 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + + I + +++G+ +++ E L M +G + T +V Y N
Sbjct: 552 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 611
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
LK A ++++ G D ++Y ++V + +A + L +EM + V Y
Sbjct: 612 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 671
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARM 312
L++G+ A+ VF+ ++ G+ D +
Sbjct: 672 LIKGFLKRKKFLEAREVFDQMRREGLAADKEI 703
Score = 37.4 bits (85), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/150 (20%), Positives = 57/150 (38%)
Query: 261 VLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAY 320
++ RE V Y ++ G + A + ++ G TPD + ++N Y
Sbjct: 232 IVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGY 291
Query: 321 QMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGK 380
G+ K + + M++ GL+P+ I+ + +L A E ++ R G +
Sbjct: 292 CRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDT 351
Query: 381 EASCTLAAWFKRLGVVEEVEHVLREYGLRE 410
TL F + G + E R+
Sbjct: 352 VVYTTLIDGFCKRGDIRAASKFFYEMHSRD 381
Score = 32.0 bits (71), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 26/146 (17%), Positives = 56/146 (38%)
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
F E +G + SY ++ + G + LL M+ + Y ++ GY
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G + ++ E ++ G+ P++ + +I + +A AF M + G+ P
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 347 CVALILSACEKENQLNRALEFLIDLE 372
++ K + A +F ++
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMH 378
>sp|Q9SSF9|PP123_ARATH Pentatricopeptide repeat-containing protein At1g74750
OS=Arabidopsis thaliana GN=At1g74750 PE=2 SV=1
Length = 855
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 96/204 (47%), Gaps = 5/204 (2%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
+Y ++ E L ++F Y+ II+ GK + A M +G + VT +M
Sbjct: 451 MYQRMQEAGLSPDTFT-----YSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIM 505
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ +++KA N + A + + +++ G DK +Y ++ G L+ E + EM +
Sbjct: 506 IALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNW 565
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
VY L+ + GN + A + ++A+ AG+ P+ C L++ + + +AY
Sbjct: 566 VPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYN 625
Query: 332 AFQNMRKAGLEPSDKCVALILSAC 355
Q+M GL PS + L+LS C
Sbjct: 626 LLQSMLALGLHPSLQTYTLLLSCC 649
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 110/244 (45%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + + N Y ++IH YG+ ++ A N M+ G D+VT ++ +++KAG
Sbjct: 385 MVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGF 444
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L +A + ++ ++ G D +Y ++ +AG L L EM Q +
Sbjct: 445 LDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNI 504
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ ++ N E A +++ +Q AG PD ++++ G ++A F M++
Sbjct: 505 MIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKN 564
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
P + L++ K +++A ++ + + G +L + F R+ + E
Sbjct: 565 WVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAY 624
Query: 401 HVLR 404
++L+
Sbjct: 625 NLLQ 628
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/236 (19%), Positives = 99/236 (41%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+ F+ + YT ++ G+ Q L M R G + VT ++ Y +A LK
Sbjct: 352 QPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLK 411
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A F +++ G D+ +Y +++ + +AG LD + + M + + Y ++
Sbjct: 412 EAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVII 471
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G+ A R+F + G TP+ ++I + A + A +++M+ AG +
Sbjct: 472 NCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQ 531
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
P ++++ L A +++R ++ + L + + G V++
Sbjct: 532 PDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDK 587
>sp|O82178|PP186_ARATH Pentatricopeptide repeat-containing protein At2g35130
OS=Arabidopsis thaliana GN=At2g35130 PE=2 SV=1
Length = 591
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 105/234 (44%), Gaps = 1/234 (0%)
Query: 173 YTKIIHGYGK-KMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEI 231
Y I G K K + A + MKR T +M+ +Y KA M+ + + E+
Sbjct: 231 YNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEM 290
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
+ + +Y ++V A+ R G+ ++ E + ++ + VY AL+ YS G
Sbjct: 291 RSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYP 350
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALI 351
GA +F +Q G PD ++++AY AG A F+ M++ G+ P+ K L+
Sbjct: 351 YGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLL 410
Query: 352 LSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
LSA K + + + ++ +G ++ + RLG ++E +L E
Sbjct: 411 LSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAE 464
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 90/226 (39%), Gaps = 6/226 (2%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
NI YT +++ + ++ + AE ++ G D ++ YS+AG A E F
Sbjct: 298 NICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIF 357
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
++ +G D+ SY MV AY RAG+ E + EM + + + LL YS
Sbjct: 358 SLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKA 417
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
+ + + + + G+ PD + ++N Y GQ K M
Sbjct: 418 RDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTY 477
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
++++ K L R E ++L+ F + W R+G
Sbjct: 478 NILINIYGKAGFLERIEELFVELKEKNFRP------DVVTWTSRIG 517
Score = 62.0 bits (149), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 78/202 (38%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E + Y ++ YG+ +AE MKR G + +++ YSKA ++ E
Sbjct: 366 EPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEA 425
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
+E+ G D SM+ Y R G + E +L EM+ Y L+ Y
Sbjct: 426 IVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYG 485
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G E + +F ++ PD I AY K F+ M +G P
Sbjct: 486 KAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGG 545
Query: 347 CVALILSACEKENQLNRALEFL 368
++LSAC E Q+ + L
Sbjct: 546 TAKVLLSACSSEEQVEQVTSVL 567
Score = 58.5 bits (140), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 107/269 (39%), Gaps = 48/269 (17%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEH-PLYLQVAELALLEESFEANIR 171
V+ G L A+W D + V QL+L + + V E L + SF+ ++
Sbjct: 105 VADVLGALPSTHASW--------DDLINVSVQLRLNKKWDSIILVCEWILRKSSFQPDVI 156
Query: 172 DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEI 231
+ +I YG+K Q + AE+ + + ++ + T +++ Y
Sbjct: 157 CFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAY---------------- 200
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV---YVGSEVYKALLRGY-SM 287
AG+++R EV+L EM V +G VY A + G
Sbjct: 201 -------------------CMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKR 241
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
GN+E A VF+ ++ P L+IN Y A +S ++ + MR +P+
Sbjct: 242 KGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICT 301
Query: 348 VALILSACEKENQLNRALEFLIDLERDGF 376
+++A +E +A E L+ DG
Sbjct: 302 YTALVNAFAREGLCEKAEEIFEQLQEDGL 330
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 67/171 (39%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ + ++ Y K + E + M G D L M+ +Y + G E+
Sbjct: 403 TMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKIL 462
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++ D +Y ++ Y +AG L+R E L E+ + + + + YS
Sbjct: 463 AEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRK 522
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
VFE + +G PD +L++A Q ++ + + M K
Sbjct: 523 KLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKG 573
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 101/231 (43%), Gaps = 1/231 (0%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKL 233
T +I+ Y KK ++ A + +M +G + D T TV++ K + AEE F E++
Sbjct: 561 TGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRG 620
Query: 234 LGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEG 293
G D SYG ++ + + G + + + EM + + +Y LL G+ +G E
Sbjct: 621 KGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEK 680
Query: 294 AQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILS 353
A+ + + + G+ P+A +I+ Y +G +A+ F M+ GL P ++
Sbjct: 681 AKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVD 740
Query: 354 ACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
C + N + RA+ + + G L W + G E VL
Sbjct: 741 GCCRLNDVERAIT-IFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLN 790
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 92/180 (51%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+++++ + + YT +++G K ++ +AE M+ +G D + V++ +SK G
Sbjct: 582 SMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLG 641
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
N++ A F+E+ G + Y ++ + R+G +++ + LL EM + ++ + Y
Sbjct: 642 NMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYC 701
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
++ GY +G+ A R+F+ ++ G+ PD+ + L++ ++A T F +K
Sbjct: 702 TIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKG 761
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 112/276 (40%), Gaps = 16/276 (5%)
Query: 134 RRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTL 193
R D + VLK++K E+ +I Y +I G K ++ A + L
Sbjct: 467 RFGDAMRVLKEMK----------------EQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 194 LAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRA 253
+ M G + T + Y +A A++ +E++ G +K ++ Y +
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKK 570
Query: 254 GMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
G + R M Q + ++ Y L+ G N + A+ +F ++ GI PD
Sbjct: 571 GKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSY 630
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
+LIN + G QKA + F M + GL P+ ++L + ++ +A E L ++
Sbjct: 631 GVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV 690
Query: 374 DGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLR 409
G CT+ + + G + E + E L+
Sbjct: 691 KGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLK 726
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 121/304 (39%), Gaps = 46/304 (15%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++EE N+ Y ++ G+ + +I+ A+ L M +G + VT ++ Y K+G+
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG--------------------- 259
L A F+E+KL G D Y ++V R ++R
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNAL 772
Query: 260 --------------EVLLREMDAQEVYVGSE---VYKALLRGYSMNGNSEGAQRVFEAIQ 302
EVL R MD G Y ++ GN E A+ +F +Q
Sbjct: 773 INWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQ 832
Query: 303 FAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLN 362
A + P L+N Y G+ + + F AG+EP ++I++A KE
Sbjct: 833 NANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTT 892
Query: 363 RALE-----FLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRETYSKIPG 417
+AL F + DG + L + F ++G +E E V+ E +R Y IP
Sbjct: 893 KALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVM-ENMVRLQY--IPD 949
Query: 418 SRSI 421
S ++
Sbjct: 950 SATV 953
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 100/237 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E + N Y I GY + + +A+ + M+ G + ++V T ++ Y K G
Sbjct: 513 MVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGK 572
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + + G D ++Y ++ + +D E + REM + + Y
Sbjct: 573 VIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGV 632
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G+S GN + A +F+ + G+TP+ + +L+ + +G+ +KA M G
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
L P+ I+ K L A +++ G + TL RL VE
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVE 749
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 88/204 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I G K A+ + M G + + SK G ++ A+ F+ +
Sbjct: 315 YSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMI 374
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G ++Y S++ Y R + +G LL EM + + + Y +++G +G+ +
Sbjct: 375 ASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLD 434
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
GA + + + +G P+ + LI + + A + M++ G+ P C ++
Sbjct: 435 GAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLI 494
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
K +++ A FL+++ +G
Sbjct: 495 IGLSKAKRMDEARSFLVEMVENGL 518
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 96/233 (41%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ G + A N + M G + V T ++ + + A +E+K
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK 479
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D Y S+++ +A +D L EM + + Y A + GY
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFA 539
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + ++ G+ P+ +C LIN Y G+ +A +A+++M G+ K +++
Sbjct: 540 SADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLM 599
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ K ++++ A E ++ G + L F +LG +++ + E
Sbjct: 600 NGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 64/144 (44%)
Query: 195 AMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAG 254
+M +G + + T V++ K L+ A+ E+ LG LD +Y ++ ++
Sbjct: 267 SMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGR 326
Query: 255 MLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCA 314
D + L+ EM + + + +Y + S G E A+ +F+ + +G+ P A+ A
Sbjct: 327 NADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYA 386
Query: 315 LLINAYQMAGQSQKAYTAFQNMRK 338
LI Y ++ Y M+K
Sbjct: 387 SLIEGYCREKNVRQGYELLVEMKK 410
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 57/130 (43%)
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
Y + N++ E E+K + +YG++V +G LD +++EM A
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+Y L++ + N A RV + ++ GI PD LI A + +A +
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511
Query: 335 NMRKAGLEPS 344
M + GL+P+
Sbjct: 512 EMVENGLKPN 521
Score = 40.0 bits (92), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 71/167 (42%), Gaps = 9/167 (5%)
Query: 161 LLEESFE----ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS 216
L++ SF+ N Y +I K+ ++ A+ M+ + +T T ++ Y
Sbjct: 792 LMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYD 851
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY---- 272
K G F+E G D Y ++ A+++ GM + VL+ +M A+
Sbjct: 852 KMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGC 911
Query: 273 -VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLIN 318
+ +ALL G++ G E A++V E + PD+ LIN
Sbjct: 912 KLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELIN 958
>sp|Q9LYZ9|PP362_ARATH Pentatricopeptide repeat-containing protein At5g02860
OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1
Length = 819
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 94/219 (42%), Gaps = 2/219 (0%)
Query: 187 QNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSM 246
Q A MK GF D+VT ++ +Y K+ K A + E+ L G +Y S+
Sbjct: 296 QEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSL 355
Query: 247 VMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGI 306
+ AY R GMLD L +M + Y LL G+ G E A +FE ++ AG
Sbjct: 356 ISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGC 415
Query: 307 TPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALE 366
P+ I Y G+ + F + GL P D L A +N ++ +
Sbjct: 416 KPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSP-DIVTWNTLLAVFGQNGMDSEVS 474
Query: 367 FLI-DLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
+ +++R GF+ +E TL + + R G E+ V R
Sbjct: 475 GVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYR 513
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 78/183 (42%)
Query: 189 AENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVM 248
AE +K RGF D TL MV +Y + + A + +K G +Y S++
Sbjct: 613 AERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMY 672
Query: 249 AYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITP 308
+ R+ + E +LRE+ A+ + Y ++ Y N A R+F ++ +GI P
Sbjct: 673 MHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVP 732
Query: 309 DARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFL 368
D I +Y ++A + M K G P+ I+ K N+ + A F+
Sbjct: 733 DVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFV 792
Query: 369 IDL 371
DL
Sbjct: 793 EDL 795
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 111/262 (42%), Gaps = 13/262 (4%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
F +I Y +I Y + + A M +G D T T ++ + +AG ++ A
Sbjct: 345 FSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAM 404
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
FEE++ G + ++ + + Y G + E++ + + LL +
Sbjct: 405 SIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVF 464
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
NG VF+ ++ AG P+ LI+AY G ++A T ++ M AG+ P
Sbjct: 465 GQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDL 524
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEAS-CTLAAWF---KRLGVVEEVEH 401
+L+A + ++ + L ++E DG E + C+L + K +G++ H
Sbjct: 525 STYNTVLAALARGGMWEQSEKVLAEME-DGRCKPNELTYCSLLHAYANGKEIGLM----H 579
Query: 402 VLREYGLRETYSKIPGSRSIAL 423
L E E YS + R++ L
Sbjct: 580 SLAE----EVYSGVIEPRAVLL 597
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 100/244 (40%), Gaps = 1/244 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLL-AMKRRGFICDQVTLTVMVVMYSKAGNL 221
E+ + + Y I++ +GK N +L+ MK G D T ++ +
Sbjct: 236 EDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLH 295
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
+ A + FEE+K G DK +Y +++ Y ++ +L EM Y +L
Sbjct: 296 QEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSL 355
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+ Y+ +G + A + + G PD L++ ++ AG+ + A + F+ MR AG
Sbjct: 356 ISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGC 415
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEH 401
+P+ + + ++ ++ G TL A F + G+ EV
Sbjct: 416 KPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSG 475
Query: 402 VLRE 405
V +E
Sbjct: 476 VFKE 479
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/194 (20%), Positives = 83/194 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+ E+ + ++ YT ++ G+ + ++++A + M+ G + T + MY G
Sbjct: 375 MAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGK 434
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ F+EI + G D ++ +++ + + GM + +EM E +
Sbjct: 435 FTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNT 494
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ YS G+ E A V+ + AG+TPD ++ A G +++ M
Sbjct: 495 LISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGR 554
Query: 341 LEPSDKCVALILSA 354
+P++ +L A
Sbjct: 555 CKPNELTYCSLLHA 568
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 96/238 (40%), Gaps = 2/238 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I + ++ +G+ MKR GF+ ++ T ++ YS+ G+ + A +
Sbjct: 453 DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVY 512
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ G D +Y +++ A R GM ++ E +L EM+ Y +LL Y+ N
Sbjct: 513 RRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYA-N 571
Query: 289 GNSEGAQRVFEAIQFAG-ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G G ++G I P A + L+ +A AF +++ G P
Sbjct: 572 GKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITT 631
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ ++S + + +A L ++ GF +L R + E +LRE
Sbjct: 632 LNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILRE 689
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 73/172 (42%), Gaps = 2/172 (1%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQ-VTLTVMVVMYSKAGNLKMAEETFEEI 231
Y ++H Y +I ++L G I + V L +V++ SK L AE F E+
Sbjct: 562 YCSLLHAYANGKEI-GLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSEL 620
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
K G D + SMV Y R M+ + +L M + Y +L+ +S + +
Sbjct: 621 KERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADF 680
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
++ + I GI PD +I AY + + A F MR +G+ P
Sbjct: 681 GKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVP 732
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/235 (18%), Positives = 92/235 (39%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
NI + I YG + + + G D VT ++ ++ + G F
Sbjct: 418 NICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVF 477
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+K G ++ ++ +++ AY R G ++ + R M V Y +L +
Sbjct: 478 KEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARG 537
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G E +++V ++ P+ L++AY + ++ + + +EP +
Sbjct: 538 GMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLL 597
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
++ C K + L A +L+ GF ++ + + R +V + VL
Sbjct: 598 KTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVL 652
>sp|Q8GYP6|PPR49_ARATH Pentatricopeptide repeat-containing protein At1g18900
OS=Arabidopsis thaliana GN=At1g18900 PE=1 SV=1
Length = 860
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ II+ GK + A M +G + VT +M+ +++KA N + A + + +++
Sbjct: 472 YSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQ 531
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G DK +Y ++ G L+ E + EM + VY L+ + GN E
Sbjct: 532 NAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVE 591
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + ++A+ AG+ P+ C L++ + + +AY QNM GL PS + L+L
Sbjct: 592 KAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Query: 353 SAC 355
S C
Sbjct: 652 SCC 654
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 113/259 (43%), Gaps = 6/259 (2%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + + N Y ++IH YG+ + A N M+ G D+VT ++ +++KAG
Sbjct: 390 MVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGF 449
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L +A + ++ ++ G D +Y ++ +AG L L EM Q Y
Sbjct: 450 LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNI 509
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ ++ N + A +++ +Q AG PD ++++ G ++A F M++
Sbjct: 510 MMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKN 569
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
P + L++ K + +A ++ + G +L + F R+ + E
Sbjct: 570 WIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAY 629
Query: 401 HVLRE---YGLR---ETYS 413
+L+ GLR +TY+
Sbjct: 630 ELLQNMLALGLRPSLQTYT 648
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/236 (19%), Positives = 100/236 (42%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+ F+ + YT ++ G+ Q L M R G + VT ++ Y +A L
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A F +++ G D+ +Y +++ + +AG LD + + M A + + Y ++
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G+ A ++F + G TP+ ++++ + A Q A +++M+ AG E
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
P ++++ L A ++++ ++ + L + + G VE+
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEK 592
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 100/249 (40%), Gaps = 9/249 (3%)
Query: 158 ELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR-GFICDQVTLTVMVVMYS 216
L L ++++AN K ++ YG NA +KR+ GF D T T MV
Sbjct: 324 NLGLRIDAYQAN--QVLKQMNDYG------NALGFFYWLKRQPGFKHDGHTYTTMVGNLG 375
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
+A + +E+ G + +Y ++ +Y RA L+ + +M
Sbjct: 376 RAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRV 435
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
Y L+ ++ G + A +++ +Q G++PD +++IN AG A+ F M
Sbjct: 436 TYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEM 495
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVV 396
G P+ +++ K AL+ D++ GF K + G +
Sbjct: 496 VDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 555
Query: 397 EEVEHVLRE 405
EE E V E
Sbjct: 556 EEAEAVFTE 564
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 108/243 (44%), Gaps = 4/243 (1%)
Query: 160 ALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
A+ EE F + R Y+ +IHG K +MK +G + D +++ +
Sbjct: 538 AMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGF 597
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
K G + A + EE+K G +YGS++ + LD +L E ++ + +
Sbjct: 598 CKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNV 657
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
+Y +L+ G+ G + A + E + G+TP+ L++A A + +A FQ+
Sbjct: 658 VIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQS 717
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGV 395
M++ P+ ++++ K + N+A F ++++ G + T+ + + G
Sbjct: 718 MKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGN 777
Query: 396 VEE 398
+ E
Sbjct: 778 IAE 780
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 109/252 (43%), Gaps = 8/252 (3%)
Query: 159 LALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
L+LL+E S +A+I Y I +GK ++ A ++ G D+VT T M+ +
Sbjct: 223 LSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGV 282
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
KA L A E FE ++ +Y +M+M Y AG D LL A+
Sbjct: 283 LCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPS 342
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
Y +L G + A +VFE ++ P+ +LI+ AG+ A+
Sbjct: 343 VIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRD 401
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
+M+KAGL P+ + V +++ K +L+ A +++ + V T + LG
Sbjct: 402 SMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMD---YKVCTPDEITFCSLIDGLG 458
Query: 395 VVEEVEHVLREY 406
V V+ + Y
Sbjct: 459 KVGRVDDAYKVY 470
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 96/226 (42%), Gaps = 6/226 (2%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
L+ Q+ EL +E + +T +I G+ K+ ++ +A + L MK D V V
Sbjct: 190 LFQQMQELG-----YEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVC 244
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ + K G + MA + F EI+ G D+ +Y SM+ +A LD + ++
Sbjct: 245 IDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRR 304
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
+ Y ++ GY G + A + E + G P ++ + G+ +A
Sbjct: 305 VPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALK 364
Query: 332 AFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
F+ M+K P+ +++ + +L+ A E +++ G
Sbjct: 365 VFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLF 409
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 92/208 (44%), Gaps = 4/208 (1%)
Query: 161 LLEES----FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS 216
L EE+ E N+ Y+ +I G+GK +I A L + ++G + T ++
Sbjct: 644 LFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALV 703
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
KA + A F+ +K L ++ +YG ++ + ++ V +EM Q + +
Sbjct: 704 KAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTI 763
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
Y ++ G + GN A +F+ + G PD+ +I ++ A++ F+
Sbjct: 764 SYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEET 823
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRA 364
R+ GL +K ++L K + L +A
Sbjct: 824 RRRGLPIHNKTCVVLLDTLHKNDCLEQA 851
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 89/200 (44%), Gaps = 8/200 (4%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+ R Y +I G+ K ++ A L MK +GF VT ++ +K L A F
Sbjct: 586 DTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLF 645
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQ----EVYVGSEVYKALLRG 284
EE K L+ Y S++ + + G +D ++L E+ + +Y + + AL++
Sbjct: 646 EEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKA 705
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
+N A F++++ TP+ +LIN + KA+ +Q M+K G++PS
Sbjct: 706 EEIN----EALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPS 761
Query: 345 DKCVALILSACEKENQLNRA 364
++S K + A
Sbjct: 762 TISYTTMISGLAKAGNIAEA 781
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/237 (18%), Positives = 99/237 (41%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y +I + ++ A +M++ G + T+ +MV K+ L A F
Sbjct: 376 NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMF 435
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
EE+ D+ ++ S++ + G +D + +M + S VY +L++ + +
Sbjct: 436 EEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNH 495
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G E ++++ + +PD ++ ++ AG+ +K F+ ++ P +
Sbjct: 496 GRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSY 555
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++++ K N E ++ G ++ A + F + G V + +L E
Sbjct: 556 SILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEE 612
Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 89/210 (42%), Gaps = 4/210 (1%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+R ++ K ++ A M + D++T ++ K G + A + +
Sbjct: 411 NVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVY 470
Query: 229 EEIKLLGEPLDKRS--YGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
E K+L S Y S++ + G + G + ++M Q ++ +
Sbjct: 471 E--KMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMF 528
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G E + +FE I+ PDAR ++LI+ AG + + Y F +M++ G +
Sbjct: 529 KAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTR 588
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGF 376
+++ K ++N+A + L +++ GF
Sbjct: 589 AYNIVIDGFCKCGKVNKAYQLLEEMKTKGF 618
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 86/217 (39%), Gaps = 2/217 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICD-QVTLTVMVVMYSKAG 219
+L+ N YT +I + + ++ M + D Q+ T M M+ KAG
Sbjct: 473 MLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMF-KAG 531
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
+ FEEIK D RSY ++ ++AG + L M Q + + Y
Sbjct: 532 EPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYN 591
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
++ G+ G A ++ E ++ G P +I+ + +AY F+ +
Sbjct: 592 IVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK 651
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+E + + ++ K +++ A L +L + G
Sbjct: 652 RIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 688
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/286 (19%), Positives = 114/286 (39%), Gaps = 23/286 (8%)
Query: 111 ICVSPETG----NLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPL-----YLQVAELAL 161
IC ETG + + L+A KP+ + VL++LK + + Y + EL
Sbjct: 39 ICNVLETGPWGPSAENTLSALS--FKPQPEFVIGVLRRLKDVNRAIEYFRWYERRTELPH 96
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL 221
ES Y ++ + + L M GF T MV+ KA L
Sbjct: 97 CPES-------YNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKL 149
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
+ + + ++ +Y +++ A+ D L ++M ++ L
Sbjct: 150 REGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTL 209
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
+RG++ G + A + + ++ + + D + + I+++ G+ A+ F + GL
Sbjct: 210 IRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGL 269
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLA 387
+P + ++ K N+L+ A+E LE++ + CT A
Sbjct: 270 KPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKN-----RRVPCTYA 310
>sp|Q8GZ63|PP397_ARATH Pentatricopeptide repeat-containing protein At5g25630
OS=Arabidopsis thaliana GN=At5g25630 PE=2 SV=2
Length = 574
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 126/289 (43%), Gaps = 9/289 (3%)
Query: 92 ISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRF----MKPRRADWLAVLKQLKL 147
+S+ + TK F +I E+GN+ D + A ++ + P + + ++K +
Sbjct: 103 VSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGI 162
Query: 148 MEHP-LYLQVAELALLEESFEA--NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICD 204
P ++ +L L E + + NIR + ++ + KK +++ A + M+ G D
Sbjct: 163 AGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPD 222
Query: 205 QVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPL--DKRSYGSMVMAYVRAGMLDRGEVL 262
VT + Y + G AE E ++ E + R+ G +V Y R G + G
Sbjct: 223 TVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRF 282
Query: 263 LREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQM 322
+R M V V+ +L+ G+ + +G V ++ + D + ++NA+
Sbjct: 283 VRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSS 342
Query: 323 AGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDL 371
AG +KA F+ M KAG++P +++ + + +A E L L
Sbjct: 343 AGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETL 391
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 1/192 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E EAN+ + +I+G+ + M + L MK D +T + ++ +S AG ++
Sbjct: 288 EMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYME 347
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A + F+E+ G D +Y + YVRA + E LL + E ++ ++
Sbjct: 348 KAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIV-ESRPNVVIFTTVI 406
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G+ NG+ + A RVF + G++P+ + L+ Y Q KA Q MR G++
Sbjct: 407 SGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVK 466
Query: 343 PSDKCVALILSA 354
P + L+ A
Sbjct: 467 PENSTFLLLAEA 478
Score = 35.4 bits (80), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 33/174 (18%), Positives = 73/174 (41%), Gaps = 3/174 (1%)
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A+ F+ + G SY +++ A ++ E++ + S + A++
Sbjct: 64 AQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVIN 123
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG--- 340
+S +GN E A + ++ G+ P LI Y +AG+ +++ M + G
Sbjct: 124 AFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVD 183
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
+ P+ + +++ A K+ ++ A E + +E G T+A + + G
Sbjct: 184 VGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKG 237
>sp|Q9SIC9|PP178_ARATH Pentatricopeptide repeat-containing protein At2g31400,
chloroplastic OS=Arabidopsis thaliana GN=At2g31400 PE=2
SV=1
Length = 918
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 90/199 (45%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ Y+ +I G+ K + A N M+ G D+V+ ++ +Y+K G + A +
Sbjct: 408 NVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDIL 467
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E+ +G D +Y +++ Y + G D + + EM + V Y L+ GYS
Sbjct: 468 REMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKG 527
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A +F + AG+ D + + LI+A G A + M K G+ P+
Sbjct: 528 GLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTY 587
Query: 349 ALILSACEKENQLNRALEF 367
I+ A + ++R+ ++
Sbjct: 588 NSIIDAFGRSATMDRSADY 606
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 97/209 (46%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
E ++ Y ++ K Q+ A L M + + + V+ + ++ ++KAG A
Sbjct: 371 EQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALN 430
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
F E++ LG LD+ SY +++ Y + G + +LREM + + Y ALL GY
Sbjct: 431 LFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYG 490
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G + ++VF ++ + P+ + LI+ Y G ++A F+ + AGL
Sbjct: 491 KQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVV 550
Query: 347 CVALILSACEKENQLNRALEFLIDLERDG 375
+ ++ A K + A+ + ++ ++G
Sbjct: 551 LYSALIDALCKNGLVGSAVSLIDEMTKEG 579
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 110/254 (43%), Gaps = 4/254 (1%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKK-MQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
++ E N+ Y +I GK M+ + M+R G D++T ++ + S+
Sbjct: 293 SMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRG 352
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
G + A F+E+ D SY +++ A + G +D +L +M + + Y
Sbjct: 353 GLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSY 412
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
++ G++ G + A +F +++ GI D L++ Y G+S++A + M
Sbjct: 413 STVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMAS 472
Query: 339 AGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
G++ +L K+ + + + +++R+ + TL + + G+ +E
Sbjct: 473 VGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKE 532
Query: 399 VEHVLREY---GLR 409
+ RE+ GLR
Sbjct: 533 AMEIFREFKSAGLR 546
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Query: 294 AQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILS 353
A+R+FE G + LI+AY +G ++A + F +M++ GL P+ ++
Sbjct: 252 AKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVID 311
Query: 354 ACEKEN-QLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
AC K + + +F +++R+G + +L A R G+ E ++ E
Sbjct: 312 ACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDE 364
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I G+ K+ + A + M +G + T +++ Y KA + E F ++
Sbjct: 371 YTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMS 430
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
L G D +Y +++ + G L+ + L +EM +++V YK LL G NG SE
Sbjct: 431 LRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESE 490
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +FE I+ + + D + ++I+ A + A+ F ++ G++P K +++
Sbjct: 491 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMI 550
Query: 353 SACEKENQLNRALEFLIDLERDG 375
K+ L+ A +E DG
Sbjct: 551 GGLCKKGPLSEAELLFRKMEEDG 573
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 109/245 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ N+ ++ +I + K+ +++ AE M RG D +T T ++ + K +
Sbjct: 324 MIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENH 383
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A + + + G + R++ ++ Y +A +D G L R+M + V + Y
Sbjct: 384 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 443
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L++G+ G A+ +F+ + + P+ +L++ G+S+KA F+ + K+
Sbjct: 444 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 503
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+E +I+ ++++ A + L G G + + + G + E E
Sbjct: 504 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 563
Query: 401 HVLRE 405
+ R+
Sbjct: 564 LLFRK 568
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 101/245 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E + N Y +++ K Q A L M+ R D V ++++ K G+
Sbjct: 219 MVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 278
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A F E+++ G + +Y ++ + AG D G LLR+M +++ +
Sbjct: 279 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 338
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ + G A+ + + + GI PD LI+ + KA M G
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+P+ + ++++ K N+++ LE + G + TL F LG + +
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458
Query: 401 HVLRE 405
+ +E
Sbjct: 459 ELFQE 463
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/224 (19%), Positives = 102/224 (45%), Gaps = 1/224 (0%)
Query: 155 QVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
Q+ +L ++ + + NIR + +I+GY K +I + M RG + D VT ++
Sbjct: 389 QMVDL-MVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQG 447
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
+ + G L +A+E F+E+ P + +Y ++ G ++ + +++ ++ +
Sbjct: 448 FCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELD 507
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+Y ++ G + A +F ++ G+ P + ++I G +A F+
Sbjct: 508 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFR 567
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMV 378
M + G P +++ A + ++++ + +L+R GF V
Sbjct: 568 KMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSV 611
Score = 35.0 bits (79), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 30/162 (18%), Positives = 68/162 (41%), Gaps = 1/162 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
NI Y ++ G + + A +++ D +++ A + A + F
Sbjct: 472 NIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 531
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ L G ++Y M+ + G L E+L R+M+ Y L+R + +
Sbjct: 532 CSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGD 591
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAY 330
G++ + ++ E ++ G + DA ++I+ G+ +K++
Sbjct: 592 GDATKSVKLIEELKRCGFSVDASTIKMVIDMLS-DGRLKKSF 632
Score = 33.1 bits (74), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 41/238 (17%), Positives = 90/238 (37%), Gaps = 8/238 (3%)
Query: 172 DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEI 231
D++++ K Q M+ +G + TL++M+ + + L +A +I
Sbjct: 90 DFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKI 149
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE----VYKALLRGYSM 287
LG + ++ +++ G + L+ M V +G + L+ G +
Sbjct: 150 IKLGYEPNTITFSTLINGLCLEGRVSEALELVDRM----VEMGHKPDLITINTLVNGLCL 205
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
+G A + + + G P+A ++N +GQ+ A + M + ++
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++I+ K L+ A ++E G L F G ++ +LR+
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRD 323
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 115/263 (43%), Gaps = 18/263 (6%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRD 172
++P+ S L+ +V+ K R A+ L H +++ +
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEEL----------HK--------EMIQRGISPDTVT 354
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +I G+ K+ Q+ A + L M +G + T +++ Y KA + E F ++
Sbjct: 355 YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS 414
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
L G D +Y +++ + G L+ + L +EM ++ V YK LL G NG E
Sbjct: 415 LRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPE 474
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +FE I+ + + D + ++I+ A + A+ F ++ G++P K +++
Sbjct: 475 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMI 534
Query: 353 SACEKENQLNRALEFLIDLERDG 375
K+ L+ A +E DG
Sbjct: 535 GGLCKKGSLSEADLLFRKMEEDG 557
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 103/245 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E F+ N Y ++ K Q A L M+ R D V ++++ K G+
Sbjct: 203 MVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGS 262
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A F E+++ G D Y +++ + AG D G LLR+M +++ + A
Sbjct: 263 LDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSA 322
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ + G A+ + + + GI+PD LI+ + Q KA M G
Sbjct: 323 LIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
P+ + ++++ K N ++ LE + G + TL F LG +E +
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAK 442
Query: 401 HVLRE 405
+ +E
Sbjct: 443 ELFQE 447
Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/317 (19%), Positives = 132/317 (41%), Gaps = 28/317 (8%)
Query: 62 DMGKTQVKDDTSMFTWIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETGNLS 121
DM K ++ D F+ + I + E + + + ++M +R +SP+T +
Sbjct: 307 DMIKRKITPDVVAFSAL-IDCFVKEGKLREAEELHKEMIQRG---------ISPDTVTYT 356
Query: 122 DLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYG 181
L+ + + QL H L L V++ NIR + +I+GY
Sbjct: 357 SLIDGFCKE------------NQLDKANHMLDLMVSK------GCGPNIRTFNILINGYC 398
Query: 182 KKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKR 241
K I + M RG + D VT ++ + + G L++A+E F+E+ D
Sbjct: 399 KANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIV 458
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI 301
SY ++ G ++ + +++ ++ + +Y ++ G + A +F ++
Sbjct: 459 SYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL 518
Query: 302 QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQL 361
G+ PD + ++I G +A F+ M + G P+ +++ A E
Sbjct: 519 PLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDA 578
Query: 362 NRALEFLIDLERDGFMV 378
++ + + +++R GF V
Sbjct: 579 TKSAKLIEEIKRCGFSV 595
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 86/210 (40%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ F+A+I YT +I G+ + + L M +R D V + ++ + K G L+
Sbjct: 276 KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
AEE +E+ G D +Y S++ + + LD+ +L M ++ + L+
Sbjct: 336 AEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
GY + +F + G+ D LI + G+ + A FQ M + P
Sbjct: 396 GYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRP 455
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLER 373
++L + +ALE +E+
Sbjct: 456 DIVSYKILLDGLCDNGEPEKALEIFEKIEK 485
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 85/193 (44%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
+++G ++ +A + M GF ++VT ++ + K+G +A E +++
Sbjct: 183 LVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERK 242
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
LD Y ++ + G LD L EM+ + +Y L+RG+ G +
Sbjct: 243 IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGA 302
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
++ + ITPD + LI+ + G+ ++A + M + G+ P ++
Sbjct: 303 KLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGF 362
Query: 356 EKENQLNRALEFL 368
KENQL++A L
Sbjct: 363 CKENQLDKANHML 375
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/243 (17%), Positives = 102/243 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ +E + ++ +I+G + ++ A + M G +TL +V G
Sbjct: 133 IIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGK 192
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + + G ++ +YG ++ ++G LLR+M+ +++ + + Y
Sbjct: 193 VSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSI 252
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G +G+ + A +F ++ G D + LI + AG+ ++M K
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+ P + ++ KE +L A E ++ + G +L F + +++
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372
Query: 401 HVL 403
H+L
Sbjct: 373 HML 375
Score = 37.4 bits (85), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/113 (21%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Query: 218 AGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
A + A + F + L G D ++Y M+ + G L ++L R+M+
Sbjct: 505 ASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCT 564
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAY 330
Y L+R + G++ + ++ E I+ G + DA ++++ G+ +K++
Sbjct: 565 YNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLS-DGRLKKSF 616
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 43/238 (18%), Positives = 92/238 (38%), Gaps = 8/238 (3%)
Query: 172 DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEI 231
D++++ + Q + M+ +G + TL++M+ + L +A +I
Sbjct: 74 DFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKI 133
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE----VYKALLRGYSM 287
LG D ++ +++ G + L+ M V +G + AL+ G +
Sbjct: 134 IKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRM----VEMGHKPTLITLNALVNGLCL 189
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
NG A + + + G P+ ++ +GQ+ A + M + ++
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++I+ K+ L+ A ++E GF TL F G ++ +LR+
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRD 307
>sp|Q9FGR7|PP426_ARATH Pentatricopeptide repeat-containing protein At5g50280,
chloroplastic OS=Arabidopsis thaliana GN=EMB1006 PE=2
SV=1
Length = 723
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 98/213 (46%), Gaps = 1/213 (0%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M+++G + + ++ Y+K+ +++ E F E++ G +Y ++ AY R
Sbjct: 370 MEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQ 429
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN-SEGAQRVFEAIQFAGITPDARMCA 314
D E LLREM+ + + Y L+ Y S+ A F ++ G+ P +
Sbjct: 430 PDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYT 489
Query: 315 LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
LI+AY ++G +KAY +F+ M K G++PS + +L A + + +E + R+
Sbjct: 490 ALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLRE 549
Query: 375 GFMVGKEASCTLAAWFKRLGVVEEVEHVLREYG 407
+ TL F + G+ E V+ E+
Sbjct: 550 KIKGTRITYNTLLDGFAKQGLYIEARDVVSEFS 582
Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 94/210 (44%), Gaps = 8/210 (3%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG-NLKMAEET 227
++R Y I G + +A AM + D VT +++ KAG + K E
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEI 331
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
FE++ G + +G +V ++ G+ + V+ EM+ + + + VY L+ Y+
Sbjct: 332 FEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNK 391
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
+ + E + +F ++ G+ P A +L++AY Q T + M GLEP+ K
Sbjct: 392 SNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKS 451
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFM 377
++SA + +++ D+ D F+
Sbjct: 452 YTCLISAYGRTKKMS-------DMAADAFL 474
Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 114/256 (44%), Gaps = 23/256 (8%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRD 172
+ P + L+ A+ R M+P + L L+ ME +L L E N++
Sbjct: 410 LKPSAATYNILMDAYARRMQPDIVETL-----LREME--------DLGL-----EPNVKS 451
Query: 173 YTKIIHGYGKKMQIQN-AENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEI 231
YT +I YG+ ++ + A + L MK+ G + T ++ YS +G + A +FEE+
Sbjct: 452 YTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEM 511
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVL-LREMDAQEVYVGSEV-YKALLRGYSMNG 289
G +Y S++ A+ R+G D G+++ + ++ +E G+ + Y LL G++ G
Sbjct: 512 CKEGIKPSVETYTSVLDAFRRSG--DTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQG 569
Query: 290 NSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVA 349
A+ V G+ P +L+NAY GQ K + M L+P +
Sbjct: 570 LYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYS 629
Query: 350 LILSACEKENQLNRAL 365
++ A + RA
Sbjct: 630 TMIYAFVRVRDFKRAF 645
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 116/261 (44%), Gaps = 8/261 (3%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L++ ++ Y I+HG K+ + A+ M R D TLT+++ + K GN
Sbjct: 436 MLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGN 495
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ A E F+++K LD +Y +++ + + G +D + + +M ++E+ Y
Sbjct: 496 LQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSI 555
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G+ A RV++ + I P +C +I Y +G + + + M G
Sbjct: 556 LVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEG 615
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERD--GFMVGKEASCTLAAWFKRLGVVEE 398
P ++ +E +++A + +E + G + ++ F R ++E
Sbjct: 616 FVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKE 675
Query: 399 VEHVLR---EYGL---RETYS 413
E VLR E G+ R TY+
Sbjct: 676 AEVVLRKMIERGVNPDRSTYT 696
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 79/194 (40%), Gaps = 2/194 (1%)
Query: 147 LMEHPLYLQVAEL--ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICD 204
L +H Y + E+ +L + Y ++ KK + E M+ R + D
Sbjct: 315 LCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPD 374
Query: 205 QVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLR 264
V + M+ +++++GNL A F +K G D Y ++ Y R GM+ L
Sbjct: 375 LVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRN 434
Query: 265 EMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAG 324
EM Q + Y +L G A ++F + + PD+ +LI+ + G
Sbjct: 435 EMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLG 494
Query: 325 QSQKAYTAFQNMRK 338
Q A FQ M++
Sbjct: 495 NLQNAMELFQKMKE 508
Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 85/201 (42%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
+ R G + TL +MV K G ++ +++ G D +Y +++ AY G+
Sbjct: 226 ISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL 285
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
++ L+ M + G Y ++ G +G E A+ VF + +G++PD+
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
L+ G + F +MR + P C + ++S + L++AL + ++ G
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 376 FMVGKEASCTLAAWFKRLGVV 396
+ L + R G++
Sbjct: 406 LIPDNVIYTILIQGYCRKGMI 426
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 79/178 (44%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E+ +I Y +I Y K ++ A + AM +GF T ++ K G +
Sbjct: 263 EKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYE 322
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A+E F E+ G D +Y S++M + G + E + +M +++V + +++
Sbjct: 323 RAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMM 382
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ +GN + A F +++ AG+ PD + +LI Y G A M + G
Sbjct: 383 SLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQG 440
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 87/200 (43%), Gaps = 4/200 (2%)
Query: 162 LEESFE---ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
L+ +F +N + +I Y + +++ A ++ +GF ++ +
Sbjct: 154 LDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRI 213
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
G +++A ++EI G ++ + MV A + G +++ L ++ + VY Y
Sbjct: 214 GWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTY 273
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
L+ YS G E A + A+ G +P +IN G+ ++A F M +
Sbjct: 274 NTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLR 333
Query: 339 AGLEPSDKCV-ALILSACEK 357
+GL P +L++ AC+K
Sbjct: 334 SGLSPDSTTYRSLLMEACKK 353
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/326 (19%), Positives = 127/326 (38%), Gaps = 27/326 (8%)
Query: 106 FVKQIICVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQ---VAELALL 162
F+ + IC S + GN +++ +R + P LAV++ L + L L V +L
Sbjct: 53 FLVEKICFSLKQGN-NNVRNHLIR-LNP-----LAVVEVLYRCRNDLTLGQRFVDQLGFH 105
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFIC-----------------DQ 205
+F+ + +IH + ++ +A++ LL M RR + +
Sbjct: 106 FPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSND 165
Query: 206 VTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLRE 265
+++ Y +A L+ A E F ++ G + + +++ + VR G ++ + +E
Sbjct: 166 SVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQE 225
Query: 266 MDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQ 325
+ V + ++ +G E +Q G+ PD LI+AY G
Sbjct: 226 ISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL 285
Query: 326 SQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCT 385
++A+ M G P +++ K + RA E ++ R G +
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345
Query: 386 LAAWFKRLGVVEEVEHVLREYGLRET 411
L + G V E E V + R+
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDV 371
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/246 (18%), Positives = 98/246 (39%), Gaps = 6/246 (2%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
A+ + F + Y +I+G K + + A+ M R G D T +++ K G
Sbjct: 295 AMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG 354
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
++ E+ F +++ D + SM+ + R+G LD+ + + + + +Y
Sbjct: 355 DVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYT 414
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAY---QMAGQSQKAYTAFQNM 336
L++GY G A + + G D +++ +M G++ K F M
Sbjct: 415 ILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADK---LFNEM 471
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVV 396
+ L P + +++ K L A+E ++ + TL F ++G +
Sbjct: 472 TERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDI 531
Query: 397 EEVEHV 402
+ + +
Sbjct: 532 DTAKEI 537
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/193 (20%), Positives = 85/193 (44%), Gaps = 7/193 (3%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ +++ K +++ L ++ +G D VT ++ YS G + EE F
Sbjct: 234 NVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKG---LMEEAF 290
Query: 229 EEIKLL---GEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
E + + G +Y +++ + G +R + + EM + S Y++LL
Sbjct: 291 ELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEA 350
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
G+ ++VF ++ + PD + +++ + +G KA F ++++AGL P +
Sbjct: 351 CKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN 410
Query: 346 KCVALILSA-CEK 357
+++ C K
Sbjct: 411 VIYTILIQGYCRK 423
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 62/138 (44%), Gaps = 2/138 (1%)
Query: 211 MVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE 270
M+ Y ++GN E E++ G D SY +++ +VR + + L+++M+ ++
Sbjct: 591 MIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQ 650
Query: 271 VYVGSEV--YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
+ +V Y ++L G+ + A+ V + G+ PD +IN + +
Sbjct: 651 GGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTE 710
Query: 329 AYTAFQNMRKAGLEPSDK 346
A+ M + G P DK
Sbjct: 711 AFRIHDEMLQRGFSPDDK 728
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 67/159 (42%), Gaps = 12/159 (7%)
Query: 163 EESFEANIRDYTKI----IHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
+E NI+ I I GY + + E+ L M GF+ D ++ ++ + +
Sbjct: 574 DEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVRE 633
Query: 219 GNLKMAEETFEEIKLLGEPL-----DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYV 273
N+ A F +K + E D +Y S++ + R + EV+LR+M + V
Sbjct: 634 ENMSKA---FGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNP 690
Query: 274 GSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARM 312
Y ++ G+ N A R+ + + G +PD +
Sbjct: 691 DRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDDKF 729
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 95/210 (45%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M++ G+ VT ++ Y K G K A E + +K G D +Y ++ R+
Sbjct: 219 MEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNR 278
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
+ +G +LLR+M + ++ Y L+ G+S G A ++ + G++P+
Sbjct: 279 IAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNA 338
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
LI+ + G ++A F M GL PS+ ++L K + + A F + ++R+G
Sbjct: 339 LIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNG 398
Query: 376 FMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
VG+ + + G ++E +L E
Sbjct: 399 VCVGRITYTGMIDGLCKNGFLDEAVVLLNE 428
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 88/232 (37%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+G+ + ++ A L M G + VT ++ + GN K A + F ++
Sbjct: 301 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME 360
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + SYG ++ + D M V VG Y ++ G NG +
Sbjct: 361 AKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLD 420
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + GI PD + LIN + G+ + A + + GL P+ + ++
Sbjct: 421 EAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 480
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
C + L A+ + +G L + G V E E +R
Sbjct: 481 YNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMR 532
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 104/257 (40%), Gaps = 10/257 (3%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMK---RRGFICDQVTL 208
L+ ++ + ++L +S+ YT +I G +K + A L A + R + ++V
Sbjct: 635 LFGEMVQRSILPDSYT-----YTSLISGLCRKGKTVIA--ILFAKEAEARGNVLPNKVMY 687
Query: 209 TVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
T V KAG K E++ LG D + +M+ Y R G +++ LL EM
Sbjct: 688 TCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGN 747
Query: 269 QEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
Q Y LL GYS + + ++ +I GI PD C L+ + +
Sbjct: 748 QNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEI 807
Query: 329 AYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAA 388
+ G+E +++S C ++N A + + + G + K+ + +
Sbjct: 808 GLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVS 867
Query: 389 WFKRLGVVEEVEHVLRE 405
R +E VL E
Sbjct: 868 VLNRNHRFQESRMVLHE 884
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 89/217 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L N + +I G+ + + A M+ +G +V+ V++ K
Sbjct: 324 MLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAE 383
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+A + +K G + + +Y M+ + G LD VLL EM + Y A
Sbjct: 384 FDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSA 443
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G+ G + A+ + I G++P+ + + LI G ++A ++ M G
Sbjct: 444 LINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEG 503
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
+++++ K ++ A EF+ + DG +
Sbjct: 504 HTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 540
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 67/146 (45%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
++ + +I Y+ +I+G+ K + + A+ + + R G + + + ++ + G LK
Sbjct: 431 KDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLK 490
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A +E + L G D ++ +V + +AG + E +R M + + + + L+
Sbjct: 491 EAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLI 550
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITP 308
GY +G A VF+ + G P
Sbjct: 551 NGYGNSGEGLKAFSVFDEMTKVGHHP 576
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 96/246 (39%), Gaps = 4/246 (1%)
Query: 166 FEANIRD---YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E + RD + ++ K ++ AE + M G + + V+ ++ Y +G
Sbjct: 501 LEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGL 560
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A F+E+ +G +YGS++ + G L E L+ + A V + +Y LL
Sbjct: 561 KAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLL 620
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT-AFQNMRKAGL 341
+GN A +F + I PD+ LI+ G++ A A + + +
Sbjct: 621 TAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNV 680
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEH 401
P+ + K Q + F ++ G + + + R+G +E+
Sbjct: 681 LPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTND 740
Query: 402 VLREYG 407
+L E G
Sbjct: 741 LLPEMG 746
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 79/188 (42%), Gaps = 1/188 (0%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I +I GY + +I+ + L M + + T +++ YSK ++ + +
Sbjct: 718 DIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLY 777
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
I L G DK + S+V+ + ML+ G +L+ + V V + L+ N
Sbjct: 778 RSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCAN 837
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP-SDKC 347
G A + + + GI+ D C +++ + Q++ M K G+ P S K
Sbjct: 838 GEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKY 897
Query: 348 VALILSAC 355
+ LI C
Sbjct: 898 IGLINGLC 905
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 90/243 (37%), Gaps = 35/243 (14%)
Query: 169 NIRDYTKIIHGYGKKMQIQNA---------------------------ENTLLAMK---R 198
N+ Y ++HGY K+ + + E+ +L +
Sbjct: 753 NLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKIL 812
Query: 199 RGFIC-----DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRA 253
+ FIC D+ T +++ G + A + + + LG LDK + +MV R
Sbjct: 813 KAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRN 872
Query: 254 GMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMC 313
++L EM Q + S Y L+ G G+ + A V E + I P
Sbjct: 873 HRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAE 932
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
+ ++ A G++ +A + M K L P+ ++ C K + ALE + +
Sbjct: 933 SAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSN 992
Query: 374 DGF 376
G
Sbjct: 993 CGL 995
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/232 (18%), Positives = 92/232 (39%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
+A++ Y +IH + +I L M++R ++VT ++ +S G + +A +
Sbjct: 260 DADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQ 319
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
E+ G + ++ +++ ++ G + M+A+ + Y LL G
Sbjct: 320 LLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLC 379
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
N + A+ + ++ G+ +I+ G +A M K G++P
Sbjct: 380 KNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIV 439
Query: 347 CVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
+ +++ K + A E + + R G TL R+G ++E
Sbjct: 440 TYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKE 491
Score = 35.8 bits (81), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 48/268 (17%), Positives = 97/268 (36%), Gaps = 18/268 (6%)
Query: 107 VKQIICVSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESF 166
+ Q++C++ + R P R +LK+L LM L
Sbjct: 71 IVQLVCITTH-------ILVRARMYDPARH----ILKELSLMSGKSSFVFGALMTTYRLC 119
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
+N Y +I Y ++ IQ++ M GF T ++ K+G
Sbjct: 120 NSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 179
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
+E+ D ++ ++ G ++ L+++M+ Y +L Y
Sbjct: 180 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 239
Query: 287 MNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDK 346
G + A + + ++ G+ D +LI+ + + K Y ++MRK + P++
Sbjct: 240 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 299
Query: 347 CVALILSACEKENQ-------LNRALEF 367
+++ E + LN L F
Sbjct: 300 TYNTLINGFSNEGKVLIASQLLNEMLSF 327
Score = 35.4 bits (80), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 31/172 (18%), Positives = 66/172 (38%), Gaps = 20/172 (11%)
Query: 251 VRAGMLDRGEVLLRE---MDAQEVYV-------------GSEVYKALLRGYSMNGNSEGA 294
VRA M D +L+E M + +V VY L+R Y G + +
Sbjct: 83 VRARMYDPARHILKELSLMSGKSSFVFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDS 142
Query: 295 QRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSA 354
+F + G P C ++ + +G+ ++ + M K + P ++++
Sbjct: 143 LEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINV 202
Query: 355 CEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG----VVEEVEHV 402
E ++ + +E+ G+ T+ W+ + G +E ++H+
Sbjct: 203 LCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHM 254
Score = 33.1 bits (74), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 49/133 (36%)
Query: 243 YGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQ 302
Y ++ Y+R GM+ + R M A+L +G + +
Sbjct: 126 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 185
Query: 303 FAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLN 362
I PD +LIN G +K+ Q M K+G P+ +L K+ +
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 245
Query: 363 RALEFLIDLERDG 375
A+E L ++ G
Sbjct: 246 AAIELLDHMKSKG 258
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 117/257 (45%), Gaps = 13/257 (5%)
Query: 153 YLQVAELALLEESFEA----NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTL 208
Y+Q + + +E F+ N+ + +I GY + +I A+N M +R D V+
Sbjct: 322 YVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR----DPVSW 377
Query: 209 TVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
M+ YS++G+ A F +++ G L++ S+ S + L+ G+ L +
Sbjct: 378 AAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVK 437
Query: 269 QEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQK 328
G V ALL Y G+ E A +F+ + AG D +I Y G +
Sbjct: 438 GGYETGCFVGNALLLMYCKCGSIEEANDLFK--EMAG--KDIVSWNTMIAGYSRHGFGEV 493
Query: 329 AYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERD-GFMVGKEASCTLA 387
A F++M++ GL+P D + +LSAC +++ ++ + +D G M + +
Sbjct: 494 ALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMV 553
Query: 388 AWFKRLGVVEEVEHVLR 404
R G++E+ ++++
Sbjct: 554 DLLGRAGLLEDAHNLMK 570
Score = 36.6 bits (83), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 66/158 (41%), Gaps = 19/158 (12%)
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAI 301
SY M+ Y+R G + L EM +++ + +++GY N N A+ +FE
Sbjct: 97 SYNGMISGYLRNGEFELARKLFDEMPERDLV----SWNVMIKGYVRNRNLGKARELFE-- 150
Query: 302 QFAGITPDARMCA--LLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKEN 359
I P+ +C+ +++ Y G A + F M E +D +LSA + +
Sbjct: 151 ----IMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMP----EKNDVSWNALLSAYVQNS 202
Query: 360 QLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
++ A E + +C L + K+ +VE
Sbjct: 203 KMEEACMLFKSRENWALV---SWNCLLGGFVKKKKIVE 237
>sp|Q9C6S6|PPR67_ARATH Putative pentatricopeptide repeat-containing protein At1g31840
OS=Arabidopsis thaliana GN=At1g31840 PE=2 SV=2
Length = 840
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 103/240 (42%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N+ + +I+G+ K+ ++ A + M++RG D + + ++ Y KAG L M + F
Sbjct: 285 NVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLF 344
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ G LD + S + YV++G L V+ + M Q + Y L++G +
Sbjct: 345 SQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQD 404
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G A ++ I G+ P + LI+ + G + + +++M K G P
Sbjct: 405 GRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIY 464
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGL 408
+++ K+ + A+ F + + + +L + RL +E V R G+
Sbjct: 465 GVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGI 524
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 93/214 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + N+ YT +I G + +I A + +RG VT + ++ + K GN
Sbjct: 382 MLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGN 441
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ +E++ +G P D YG +V + G++ +M Q + + V+ +
Sbjct: 442 LRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNS 501
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G+ + A +VF + GI PD ++ M G+ ++A F M K G
Sbjct: 502 LIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMG 561
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERD 374
LEP ++ A K + L+ ++R+
Sbjct: 562 LEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRN 595
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 128/318 (40%), Gaps = 29/318 (9%)
Query: 45 WSRSLRSGPALEAIKAEDMGKTQVKDDTSMFTWIQIGPNITEEQKQAISQFPRKMTKRCK 104
W R R AL+ + MG +K D + FT + + ++A+ F R
Sbjct: 506 WCRLNRFDEALKVFRL--MGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFK---- 559
Query: 105 AFVKQIICVSPETGNLSDLLAAWVRFMKP----------RRADWLAVLKQLKLMEHPLY- 153
+ + P+ L+ A+ + MKP +R A + ++ H L+
Sbjct: 560 ------MGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFK 613
Query: 154 LQVAELA------LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVT 207
E A L+E E +I Y +I GY ++ AE +K F + VT
Sbjct: 614 CHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVT 673
Query: 208 LTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMD 267
LT+++ + K ++ A F + G + +YG ++ + ++ ++ L EM
Sbjct: 674 LTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQ 733
Query: 268 AQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQ 327
+ + Y ++ G G + A +F A + PD A+LI Y G+
Sbjct: 734 EKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLV 793
Query: 328 KAYTAFQNMRKAGLEPSD 345
+A +++M + G++P D
Sbjct: 794 EAALLYEHMLRNGVKPDD 811
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 84/184 (45%), Gaps = 1/184 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E F I K++ G QI+ A L + G + VT ++ + K G
Sbjct: 243 VMERGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGE 301
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + F+ ++ G D +Y +++ Y +AGML G L + + V + V+ +
Sbjct: 302 MDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSS 361
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+ Y +G+ A V++ + GI+P+ +LI G+ +A+ + + K G
Sbjct: 362 TIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRG 421
Query: 341 LEPS 344
+EPS
Sbjct: 422 MEPS 425
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 97/238 (40%), Gaps = 8/238 (3%)
Query: 131 MKPRRADWLAVLKQLKL---MEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQ 187
+KP A + V++ + +E L+L + + E + Y +I + K M+
Sbjct: 527 IKPDVATFTTVMRVSIMEGRLEEALFLF---FRMFKMGLEPDALAYCTLIDAFCKHMKPT 583
Query: 188 NAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE-IKLLGEPLDKRSYGSM 246
M+R D V++ + K ++ A + F I+ EP D +Y +M
Sbjct: 584 IGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEP-DIVTYNTM 642
Query: 247 VMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGI 306
+ Y LD E + + + L+ N + +GA R+F + G
Sbjct: 643 ICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGS 702
Query: 307 TPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRA 364
P+A L++ + + + ++ F+ M++ G+ PS ++I+ K +++ A
Sbjct: 703 KPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEA 760
Score = 33.1 bits (74), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 46/255 (18%), Positives = 97/255 (38%), Gaps = 11/255 (4%)
Query: 142 LKQLKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGF 201
L + LM H + V +L +S N+ + +I G+ + + A M G
Sbjct: 471 LSKQGLMLHAMRFSVK---MLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGI 527
Query: 202 ICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG-- 259
D T T ++ + G L+ A F + +G D +Y +++ A+ + G
Sbjct: 528 KPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQ 587
Query: 260 --EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
+++ R + ++ V + V L + + + E A + F + + PD +I
Sbjct: 588 LFDLMQRNKISADIAVCNVVIHLLFKCHRI----EDASKFFNNLIEGKMEPDIVTYNTMI 643
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
Y + +A F+ ++ P+ + +++ K N ++ A+ + G
Sbjct: 644 CGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSK 703
Query: 378 VGKEASCTLAAWFKR 392
L WF +
Sbjct: 704 PNAVTYGCLMDWFSK 718
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 107/247 (43%), Gaps = 11/247 (4%)
Query: 155 QVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
Q+ E + + F ++ Y +I G+ K +++ M +RG + + VT +++
Sbjct: 382 QMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 440
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
+AG+ MA+E F+E+ G P + +Y +++ + G L++ V+ + ++
Sbjct: 441 LFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 500
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
Y ++ G G E +F + G+ PD +I+ + G ++A F+
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFK 560
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLG 394
M++ G P+ C ++ A ++ D E ++ + SC A +G
Sbjct: 561 EMKEDGTLPNSGCYNTLIRARLRDG----------DREASAELIKEMRSCGFAGDASTIG 610
Query: 395 VVEEVEH 401
+V + H
Sbjct: 611 LVTNMLH 617
Score = 48.5 bits (114), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 85/210 (40%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
E + Y II G K + +A N M+ +G + VT + ++ G A
Sbjct: 252 LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS 311
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
++ D ++ +++ A+V+ G L E L EM + + Y +L+ G+
Sbjct: 312 RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 371
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
M+ + A+++FE + PD LI + + ++ F+ M + GL +
Sbjct: 372 CMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 431
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDG 375
+++ + + A E ++ DG
Sbjct: 432 VTYNILIQGLFQAGDCDMAQEIFKEMVSDG 461
Score = 40.4 bits (93), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/180 (16%), Positives = 69/180 (38%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M+ G + T ++++ + + L +A ++ LG + + S++ Y +
Sbjct: 107 MQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKR 166
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
+ L+ +M + + L+ G ++ + A + + + G PD +
Sbjct: 167 ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGV 226
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
++N G + A+ M + LEP I+ K ++ AL ++E G
Sbjct: 227 VVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG 286
>sp|Q8L844|PP413_ARATH Pentatricopeptide repeat-containing protein At5g42310,
mitochondrial OS=Arabidopsis thaliana GN=At5g42310 PE=2
SV=1
Length = 709
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 92/202 (45%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ E +++ II G+ K A L + G TL ++ + +G
Sbjct: 263 DKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLE 322
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
AE FEE++ G R+Y +++ YV+ G L E ++ EM+ + V Y L+
Sbjct: 323 AEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLID 382
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
Y G E A+ V + ++ + P++ + + L+ ++ G+ QK + + M+ G++P
Sbjct: 383 AYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKP 442
Query: 344 SDKCVALILSACEKENQLNRAL 365
+ +++ K N L+ A+
Sbjct: 443 DRQFYNVVIDTFGKFNCLDHAM 464
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 102/233 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I +GK + +A T M G D+VT ++ + K G +AEE FE ++
Sbjct: 447 YNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAME 506
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G +Y M+ +Y D + LL +M +Q + + L+ Y +G
Sbjct: 507 RRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFN 566
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A E ++ G+ P + M LINAY G S++A AF+ M GL+PS + ++
Sbjct: 567 DAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLI 626
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+A ++ + A L ++ +G TL R+ ++V V E
Sbjct: 627 NAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEE 679
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 2/162 (1%)
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
Y K G LK AE E++ G D+ +Y ++ AYV AG + ++L+EM+A +V
Sbjct: 349 YVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPN 408
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
S V+ LL G+ G + +V + ++ G+ PD + ++I+ + A T F
Sbjct: 409 SFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFD 468
Query: 335 NMRKAGLEPSDKCVALILSACE-KENQLNRALEFLIDLERDG 375
M G+EP D+ L C K + A E +ER G
Sbjct: 469 RMLSEGIEP-DRVTWNTLIDCHCKHGRHIVAEEMFEAMERRG 509
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 8/210 (3%)
Query: 163 EESFEANIR--------DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
EE FEA R Y +I+ YG + + + + L MK +G + + VT T +V +
Sbjct: 499 EEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDV 558
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
Y K+G A E EE+K +G Y +++ AY + G+ ++ R M + +
Sbjct: 559 YGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPS 618
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+L+ + + A V + ++ G+ PD L+ A + QK ++
Sbjct: 619 LLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYE 678
Query: 335 NMRKAGLEPSDKCVALILSACEKENQLNRA 364
M +G +P K +++ SA Q RA
Sbjct: 679 EMIMSGCKPDRKARSMLRSALRYMKQTLRA 708
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 80/183 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L E E + + +I + K + AE AM+RRG + T +M+ Y
Sbjct: 470 MLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQER 529
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ ++K G + ++ ++V Y ++G + L EM + + S +Y A
Sbjct: 530 WDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNA 589
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ Y+ G SE A F + G+ P LINA+ + +A+ Q M++ G
Sbjct: 590 LINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENG 649
Query: 341 LEP 343
++P
Sbjct: 650 VKP 652
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/215 (18%), Positives = 96/215 (44%), Gaps = 2/215 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLL--AMKRRGFICDQVTLTVMVVMYSKAGN 220
++ ++++ +Y+ +I + +I + L ++R D + +++ ++K+G+
Sbjct: 225 QDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGD 284
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A + + G + S++ A +G E L E+ + + Y A
Sbjct: 285 PSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNA 344
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL+GY G + A+ + ++ G++PD +LLI+AY AG+ + A + M
Sbjct: 345 LLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGD 404
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
++P+ + +L+ + + + L +++ G
Sbjct: 405 VQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIG 439
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 100/235 (42%), Gaps = 2/235 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK--MAEETFEE 230
Y +I + I+ A N + M++ G+ D V ++++ +++ + M ++E
Sbjct: 200 YNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKE 259
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
I+ LD + ++M + ++G + LL A + + +++ + +G
Sbjct: 260 IERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGR 319
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
+ A+ +FE ++ +GI P R L+ Y G + A + M K G+ P + +L
Sbjct: 320 TLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSL 379
Query: 351 ILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++ A + A L ++E L A F+ G ++ VL+E
Sbjct: 380 LIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKE 434
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/284 (19%), Positives = 114/284 (40%), Gaps = 39/284 (13%)
Query: 160 ALLEESFEANI----RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
AL EE ++ I R Y ++ GY K +++AE+ + M++RG D+ T ++++ Y
Sbjct: 325 ALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAY 384
Query: 216 SKAGNLKMA--------------------------------EETFE---EIKLLGEPLDK 240
AG + A ++TF+ E+K +G D+
Sbjct: 385 VNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDR 444
Query: 241 RSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEA 300
+ Y ++ + + LD M ++ + + L+ + +G A+ +FEA
Sbjct: 445 QFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEA 504
Query: 301 IQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQ 360
++ G P A ++IN+Y + M+ G+ P+ ++ K +
Sbjct: 505 MERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGR 564
Query: 361 LNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLR 404
N A+E L +++ G L + + G+ E+ + R
Sbjct: 565 FNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFR 608
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/204 (18%), Positives = 85/204 (41%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+++++ G+ + + Q L MK G D+ V++ + K L A TF+ +
Sbjct: 412 FSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRML 471
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D+ ++ +++ + + G E + M+ + + Y ++ Y +
Sbjct: 472 SEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWD 531
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
+R+ ++ GI P+ L++ Y +G+ A + M+ GL+PS ++
Sbjct: 532 DMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALI 591
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
+A + +A+ + DG
Sbjct: 592 NAYAQRGLSEQAVNAFRVMTSDGL 615
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 99/208 (47%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+I +T +I GY ++ + + +RG + + VT +++V + ++G +K+AEE F
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+E+ G D +YG ++ G L++ + ++ ++ +G +Y ++ G
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G E A +F ++ G+ P+ ++I+ G +A + M + G P+D
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 546
Query: 349 ALILSACEKENQLNRALEFLIDLERDGF 376
++ A ++ L + + + +++ GF
Sbjct: 547 NTLIRAHLRDGDLTASAKLIEEMKSCGF 574
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 91/215 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ NI Y ++ GY + ++ A N L M R D VT T ++ Y
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 383
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ + F I G + +Y +V + ++G + E L +EM + V Y
Sbjct: 384 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 443
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL G NG E A +FE +Q + + M +I G+ + A+ F ++ G
Sbjct: 444 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKG 503
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
++P+ +++S K+ L+ A L +E DG
Sbjct: 504 VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 538
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 107/246 (43%), Gaps = 4/246 (1%)
Query: 157 AELALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMV 212
A ++L +E ++++ Y ++ G K + + L M R + + +T V++
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
Query: 213 VMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVY 272
++ K G L+ A E ++E+ G + +Y +++ Y L +L M +
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365
Query: 273 VGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTA 332
+ +L++GY M + +VF I G+ +A ++L+ + +G+ + A
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425
Query: 333 FQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKR 392
FQ M G+ P ++L +L +ALE DL++ +G T+ +
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 485
Query: 393 LGVVEE 398
G VE+
Sbjct: 486 GGKVED 491
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/245 (17%), Positives = 102/245 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E + ++ Y I++G + A + L M+ R D T + ++ + G
Sbjct: 184 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGC 243
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A F+E++ G +Y S+V +AG + G +LL++M ++E+ +
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL + G + A +++ + GI+P+ L++ Y M + +A M +
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
P ++ +++ ++ ++ + G + L F + G ++ E
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423
Query: 401 HVLRE 405
+ +E
Sbjct: 424 ELFQE 428
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/179 (18%), Positives = 77/179 (43%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
+E + + +I G + ++ A + M G D VT +V ++G+ +A
Sbjct: 154 YEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLAL 213
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
+ +++ D +Y +++ + R G +D L +EM+ + + Y +L+RG
Sbjct: 214 DLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL 273
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
G + + + I P+ +L++ + G+ Q+A ++ M G+ P+
Sbjct: 274 CKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332
Score = 41.2 bits (95), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/198 (19%), Positives = 79/198 (39%), Gaps = 36/198 (18%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM---------------- 211
AN Y+ ++ G+ + +I+ AE M G + D +T ++
Sbjct: 401 ANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEI 460
Query: 212 ------------VVMYS-------KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVR 252
+VMY+ K G ++ A F + G + +Y M+ +
Sbjct: 461 FEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCK 520
Query: 253 AGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARM 312
G L +LLR+M+ Y L+R + +G+ + ++ E ++ G + DA
Sbjct: 521 KGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASS 580
Query: 313 CALLINAYQMAGQSQKAY 330
++I+ ++G+ K++
Sbjct: 581 IKMVIDML-LSGELDKSF 597
>sp|Q5G1S8|PP241_ARATH Pentatricopeptide repeat-containing protein At3g18110,
chloroplastic OS=Arabidopsis thaliana GN=EMB1270 PE=2
SV=2
Length = 1440
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 97/201 (48%), Gaps = 1/201 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +++ + ++ + + M++ GF D++T ++ MY K G L +A + ++++K
Sbjct: 370 YNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMK 429
Query: 233 -LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNS 291
L G D +Y ++ + +A L+ EM + + Y AL+ GY+ G
Sbjct: 430 GLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKR 489
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALI 351
E A+ F + +G PD +++++ +++KA+ +++M G PS L+
Sbjct: 490 EEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELM 549
Query: 352 LSACEKENQLNRALEFLIDLE 372
+ KEN+ + + + D+E
Sbjct: 550 ILGLMKENRSDDIQKTIRDME 570
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 94/205 (45%), Gaps = 2/205 (0%)
Query: 170 IRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL--KMAEET 227
++ Y ++ Y + + A+ + AM++RG + D ++ ++ K+G L +A E
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVEL 284
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
+ ++ G D +Y +++ A R LD + +M+A Y A++ Y
Sbjct: 285 LDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGR 344
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G + A+R+F ++ G PDA L+ A+ ++K +Q M+K G +
Sbjct: 345 CGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMT 404
Query: 348 VALILSACEKENQLNRALEFLIDLE 372
I+ K+ QL+ AL+ D++
Sbjct: 405 YNTIIHMYGKQGQLDLALQLYKDMK 429
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 94/204 (46%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
IR Y +I K ++++AE + M+ F + M+ MY+ + K + +
Sbjct: 891 TIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVY 950
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ IK G D+ +Y ++++ Y R + G +L+++M + + YK+L+ +
Sbjct: 951 QRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQ 1010
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
E A+++FE + G+ D ++ + +G KA Q M+ AG+EP+ +
Sbjct: 1011 KCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATM 1070
Query: 349 ALILSACEKENQLNRALEFLIDLE 372
L++ + A + L +L+
Sbjct: 1071 HLLMVSYSSSGNPQEAEKVLSNLK 1094
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 91/213 (42%), Gaps = 2/213 (0%)
Query: 193 LLAMKRR-GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYV 251
LL M R G D +T ++ S+ NL A + FE+++ D +Y +M+ Y
Sbjct: 284 LLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYG 343
Query: 252 RAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDAR 311
R G+ E L E++ + + + Y +LL ++ N+E + V++ +Q G D
Sbjct: 344 RCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEM 403
Query: 312 MCALLINAYQMAGQSQKAYTAFQNMRK-AGLEPSDKCVALILSACEKENQLNRALEFLID 370
+I+ Y GQ A +++M+ +G P +++ + K N+ A + +
Sbjct: 404 TYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSE 463
Query: 371 LERDGFMVGKEASCTLAAWFKRLGVVEEVEHVL 403
+ G + L + + G EE E
Sbjct: 464 MLDVGIKPTLQTYSALICGYAKAGKREEAEDTF 496
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 93/205 (45%)
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
GF + ++ +M+ +++AGN+ ++ + +K G R Y M+ + +
Sbjct: 852 GFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDA 911
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
E+++ EM+ V ++ ++L+ Y+ + + +V++ I+ G+ PD LI
Sbjct: 912 EIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIM 971
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
Y + ++ Y Q MR GL+P ++SA K+ L +A + +L G +
Sbjct: 972 YCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLD 1031
Query: 380 KEASCTLAAWFKRLGVVEEVEHVLR 404
+ T+ + G + E +L+
Sbjct: 1032 RSFYHTMMKISRDSGSDSKAEKLLQ 1056
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 83/180 (46%), Gaps = 1/180 (0%)
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG-SEVYKALL 282
A + F +++L G + SMV+ Y + G + ++ + + + + S +Y ++
Sbjct: 700 ASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDII 759
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
Y + A+ V ++ +G TPD + L++AY G ++A F M + G
Sbjct: 760 EAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPS 819
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ + + ++L A + +L + +L+ GF + K + + F R G + EV+ +
Sbjct: 820 PTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKI 879
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 96/244 (39%), Gaps = 8/244 (3%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E E + Y +I Y + + + + M+ G T ++ + K L+
Sbjct: 955 ETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLE 1014
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
AE+ FEE+ G LD+ Y +M+ +G + E LL+ M + L+
Sbjct: 1015 QAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLM 1074
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
YS +GN + A++V ++ + + +I+AY + M+K GLE
Sbjct: 1075 VSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLE 1134
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGF------MVGKEA--SCTLAAWFKRLG 394
P + + A + + L LE GF + G+ + WF++L
Sbjct: 1135 PDHRIWTCFVRAASFSKEKIEVMLLLKALEDIGFDLPIRLLAGRPELLVSEVDGWFEKLK 1194
Query: 395 VVEE 398
+E+
Sbjct: 1195 SIED 1198
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 88/219 (40%), Gaps = 36/219 (16%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT II YGK+ Q AE+ + +++ G D T ++ Y++ G + A F +
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G S ++ A G L+ V++ E+ + +L ++ GN
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIF 874
Query: 293 GAQRVFEAIQFAGITPDARMCALLI----------NAYQMAGQSQKA------------- 329
++++ +++ AG P R+ ++I +A M + ++A
Sbjct: 875 EVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSML 934
Query: 330 --YTA----------FQNMRKAGLEPSDKCV-ALILSAC 355
YTA +Q +++ GLEP + LI+ C
Sbjct: 935 KMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYC 973
Score = 35.8 bits (81), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 95/222 (42%), Gaps = 9/222 (4%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L+ + ++ Y+ +I GY K + + AE+T M R G D + +VM+ + +
Sbjct: 464 MLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNE 523
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + ++ G Y M++ ++ D + +R+M+ E+
Sbjct: 524 TRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSV 583
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L++G + A R + G + ++ +Y +G+ +A+ + +++
Sbjct: 584 LVKGECF----DLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHA 639
Query: 341 LEPSDKCV--ALILSACEKENQLNRAL-EFLIDLERDGFMVG 379
S + + ALI+ C K N L+ AL E+ D G+ G
Sbjct: 640 -SGSKRLITEALIVLHC-KVNNLSAALDEYFADPCVHGWCFG 679
>sp|Q9LW84|PP236_ARATH Pentatricopeptide repeat-containing protein At3g16010
OS=Arabidopsis thaliana GN=At3g16010 PE=2 SV=1
Length = 642
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 79/182 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I+ GK + + A +K VM+ + K G L A + F E+K
Sbjct: 447 YCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMK 506
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D +Y +++ V+AGM++ LLR+M+ + +L G++ G
Sbjct: 507 NQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPR 566
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +FE I+ +GI PD L+ + AG ++A + M+ G E + IL
Sbjct: 567 RAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSIL 626
Query: 353 SA 354
A
Sbjct: 627 DA 628
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 80/168 (47%), Gaps = 1/168 (0%)
Query: 242 SYGSMVMAYVRAGMLDRGEVLLREM-DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEA 300
+Y S+++ ++ G ++ + EM + + + + Y AL+ Y G ++ A R+F+
Sbjct: 199 TYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDE 258
Query: 301 IQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQ 360
++ + P ++ L+ Y G+ +KA F+ M++AG P+ ++ K +
Sbjct: 259 MKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGR 318
Query: 361 LNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGL 408
++ A F D+ RDG L ++G VEE+ +V E G+
Sbjct: 319 VDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGM 366
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 80/204 (39%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I GY K +++ A L M +GF ++ KA + A E F+E+K
Sbjct: 412 YSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELK 471
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ R Y M+ + + G L L EM Q Y AL+ G G
Sbjct: 472 ENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMIN 531
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + ++ G D +++N + G ++A F+ ++ +G++P +L
Sbjct: 532 EANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLL 591
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
A + +++ GF
Sbjct: 592 GCFAHAGMFEEAARMMREMKDKGF 615
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 91/237 (38%), Gaps = 1/237 (0%)
Query: 170 IRDYTKIIHG-YGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
+ Y +I + K + + MK + T ++++ Y K ++ A
Sbjct: 373 VVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLL 432
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
EE+ G P +Y S++ A +A + L +E+ V S VY +++ +
Sbjct: 433 EEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKC 492
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G A +F ++ G PD L++ AG +A + + M + G
Sbjct: 493 GKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSH 552
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+IL+ + RA+E ++ G TL F G+ EE ++RE
Sbjct: 553 NIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMRE 609
Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 74/171 (43%), Gaps = 1/171 (0%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKL 233
++++ G+ + A + K R T +++M + G + E + E+
Sbjct: 166 SELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCN 225
Query: 234 LGEPL-DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G+ D +Y +++ +Y + G D L EM + ++Y LL Y G E
Sbjct: 226 EGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVE 285
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
A +FE ++ AG +P LI AG+ +AY +++M + GL P
Sbjct: 286 KALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTP 336
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 119/301 (39%), Gaps = 10/301 (3%)
Query: 120 LSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQV----AELALLEESFEANIRDYTK 175
LS A R KP + + +V+ L LM+ + +V E+ + F I Y+
Sbjct: 182 LSVFYQAKGRKCKPTSSTYNSVI--LMLMQEGQHEKVHEVYTEMCNEGDCFPDTIT-YSA 238
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
+I Y K + +A MK + T ++ +Y K G ++ A + FEE+K G
Sbjct: 239 LISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAG 298
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
+Y ++ +AG +D ++M + L+ G E
Sbjct: 299 CSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELT 358
Query: 296 RVFEAIQFAGITPDARMCALLINA-YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSA 354
VF + TP +I A ++ + + F M+ + PS+ ++++
Sbjct: 359 NVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDG 418
Query: 355 CEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLRETYSK 414
K N++ +AL L +++ GF A C+L + E + +E L+E +
Sbjct: 419 YCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKE--LKENFGN 476
Query: 415 I 415
+
Sbjct: 477 V 477
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 84/173 (48%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
YT +IHG+ K ++++ M ++G + + +T TV++ Y G +A+E F ++
Sbjct: 331 YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMS 390
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
P D R+Y ++ G +++ ++ M +E+ + Y +++G G E
Sbjct: 391 SRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVE 450
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
A +F ++ G+ P+ +I+ + G +A + F+ M++ G P++
Sbjct: 451 DAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNE 503
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 109/248 (43%), Gaps = 6/248 (2%)
Query: 161 LLEESFEANIRDYTKIIHGY---GKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSK 217
+++ E N+ +T +I + GK M+ + N ++ M + +L + MY
Sbjct: 249 MMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMY-- 306
Query: 218 AGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
G L A + F ++ G ++ Y +++ + ++ ++ G + EM + V +
Sbjct: 307 -GLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTIT 365
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y L++GY + G + AQ VF + PD R +L++ G+ +KA F+ MR
Sbjct: 366 YTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMR 425
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
K ++ + +I+ K ++ A + L G T+ + F R G++
Sbjct: 426 KREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIH 485
Query: 398 EVEHVLRE 405
E + + ++
Sbjct: 486 EADSLFKK 493
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 113/273 (41%), Gaps = 18/273 (6%)
Query: 116 ETGNLSDLLAAWV------RFMKPRRADWLAVLKQL----KLME-HPLYLQVAELALLEE 164
E G D AAW+ R ++P + A++ KLME LY + ++++ +
Sbjct: 235 EIGRWGD--AAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPD 292
Query: 165 SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA 224
F Y +I+G + A M+R G ++V T ++ + K+ ++
Sbjct: 293 VFT-----YGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDG 347
Query: 225 EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRG 284
+ F E+ G + +Y ++ Y G D + + +M ++ Y LL G
Sbjct: 348 MKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDG 407
Query: 285 YSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
NG E A +FE ++ + + ++I G+ + A+ F ++ G++P+
Sbjct: 408 LCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPN 467
Query: 345 DKCVALILSACEKENQLNRALEFLIDLERDGFM 377
++S + ++ A ++ DGF+
Sbjct: 468 VITYTTMISGFCRRGLIHEADSLFKKMKEDGFL 500
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 90/215 (41%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ FE ++ +T +++GY +I++A + GF + VT T ++ K +
Sbjct: 144 MMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRH 203
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A E F ++ G + +Y ++V G LLR+M + + + A
Sbjct: 204 LNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTA 263
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ + G A+ ++ + + PD LIN M G +A F M + G
Sbjct: 264 LIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNG 323
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
P++ ++ K ++ ++ ++ + G
Sbjct: 324 CYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKG 358
>sp|Q3E9F0|PP392_ARATH Pentatricopeptide repeat-containing protein At5g18475
OS=Arabidopsis thaliana GN=At5g18475 PE=2 SV=1
Length = 506
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 83/171 (48%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+ +I+G+ + +++ A+ L MK+ G + + ++ + K G ++ A++TF+E+K
Sbjct: 271 FNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVK 330
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G LD Y +++ + R G D LL EM A + Y +LRG S G SE
Sbjct: 331 KTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSE 390
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
A ++ + G+ + +++NA G+ +KA M + G+ P
Sbjct: 391 EALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWP 441
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 74/165 (44%), Gaps = 2/165 (1%)
Query: 243 YGSMVMAYVRAGMLDRGEVLLREMDAQEV-YVGSEVYKALLRGYSMNGNSEGAQRVFE-A 300
+ +V + + G ++ +++ EM + Y S Y L+ + S+ A +FE
Sbjct: 199 FNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDM 258
Query: 301 IQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQ 360
I GI+PD ++IN + AG+ ++A M+K G P+ + +++ K +
Sbjct: 259 ISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGK 318
Query: 361 LNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ A + ++++ G + TL F R G +E +L E
Sbjct: 319 IQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGE 363
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 113/246 (45%), Gaps = 2/246 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E N+ ++ +I + K+ ++ AE M +R D T + ++ +
Sbjct: 316 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 375
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV-YK 279
L A+ FE + + +Y +++ + +A ++ G L REM +Q VG+ V Y
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM-SQRGLVGNTVTYN 434
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
L++G G+ + AQ++F+ + G+ PD ++L++ G+ +KA F+ ++K+
Sbjct: 435 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 494
Query: 340 GLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEV 399
+EP +++ K ++ + L G T+ + F R G+ EE
Sbjct: 495 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 554
Query: 400 EHVLRE 405
+ + RE
Sbjct: 555 DALFRE 560
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 105/230 (45%), Gaps = 2/230 (0%)
Query: 158 ELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSK 217
EL + ++ F N+ Y +I G+ K +++ M +RG + + VT ++ +
Sbjct: 384 ELMISKDCF-PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 442
Query: 218 AGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
AG+ MA++ F+++ G P D +Y ++ + G L++ V+ + ++
Sbjct: 443 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYT 502
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y ++ G G E +F ++ G+ P+ + +I+ + G ++A F+ M+
Sbjct: 503 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 562
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLA 387
+ G P+ ++ A ++ + E + ++ GF VG ++ ++
Sbjct: 563 EDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGF-VGDASTISMV 611
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 75/170 (44%), Gaps = 1/170 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + +I Y+ ++ G K +++ A +++ D T +M+ KAG
Sbjct: 456 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ + F + L G + Y +M+ + R G+ + + L REM S Y
Sbjct: 516 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNT 575
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAY 330
L+R +G+ + + + ++ G DA +++IN G+ +K+Y
Sbjct: 576 LIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLH-DGRLEKSY 624
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 73/186 (39%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
N Y +I G + A+ M G D +T ++++ K G L+ A
Sbjct: 428 GNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVV 487
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
FE ++ D +Y M+ +AG ++ G L + + V +Y ++ G+
Sbjct: 488 FEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCR 547
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G E A +F ++ G P++ LI A G + + MR G
Sbjct: 548 KGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDAST 607
Query: 348 VALILS 353
++++++
Sbjct: 608 ISMVIN 613
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/288 (19%), Positives = 116/288 (40%), Gaps = 22/288 (7%)
Query: 115 PETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLME------------HPLYLQ---VAEL 159
P+ LS LL + R ++ +A++ Q+ +ME H L+L +
Sbjct: 148 PDIVTLSSLLNGYCH--GKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAV 205
Query: 160 ALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMY 215
AL++ + ++ Y +++G K+ I A + L M++ D V T ++
Sbjct: 206 ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDAL 265
Query: 216 SKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGS 275
N+ A F E+ G + +Y S++ G LL +M +++
Sbjct: 266 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 325
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
+ AL+ + G A+++++ + I PD + LIN + M + +A F+
Sbjct: 326 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 385
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEAS 383
M P+ ++ K ++ +E ++ + G +VG +
Sbjct: 386 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRG-LVGNTVT 432
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 83/178 (46%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
A++ Y +I+G+ K ++++ M +RG + + VT ++ + +AG++ A+E
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
F ++ G D +Y ++ G L++ V+ +M +E+ + Y ++RG
Sbjct: 388 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 447
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
G E A +F ++ G+ PD +++ G + + M++ GL +D
Sbjct: 448 TGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKND 505
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 102/240 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++++ N+ Y+ ++ + K ++ A+ M R D VT + ++
Sbjct: 251 MIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDR 310
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + F+ + G D SY +++ + +A ++ G L REM + + + Y
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 370
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L++G+ G+ + AQ F + F GI+PD +L+ G+ +KA F++M+K
Sbjct: 371 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 430
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
++ ++ K ++ A L G T+ + G++ EVE
Sbjct: 431 MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE 490
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 117/275 (42%), Gaps = 21/275 (7%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRD 172
++P S LL A+V+ K VL+ +L E ++ S + +I
Sbjct: 256 ITPNVITYSALLDAFVKNGK--------VLEAKELFEE----------MVRMSIDPDIVT 297
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y+ +I+G +I A M +G + D V+ ++ + KA ++ + F E+
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +Y +++ + +AG +D+ + +MD + Y LL G NG E
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELE 417
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +FE +Q + D +I G+ ++A++ F ++ GL+P ++
Sbjct: 418 KALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 477
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLA 387
S + L+ ++++G M + CTL+
Sbjct: 478 SGLCTKGLLHEVEALYTKMKQEGLM---KNDCTLS 509
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/245 (18%), Positives = 100/245 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L+ +E + +++G+ ++ ++ +A + + M G+ D V ++ K
Sbjct: 146 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKR 205
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + F+EI+ G + +Y ++V + LL +M +++ Y A
Sbjct: 206 VNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSA 265
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL + NG A+ +FE + I PD + LIN + + +A F M G
Sbjct: 266 LLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG 325
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+++ K ++ ++ ++ + G + TL F + G V++ +
Sbjct: 326 CLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQ 385
Query: 401 HVLRE 405
+
Sbjct: 386 EFFSQ 390
Score = 40.8 bits (94), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/237 (17%), Positives = 102/237 (43%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
+ +I+ + Q+ A + L M + G+ D+VT+ +V + + + A +++
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+G D +Y +++ + + ++ +E++ + + Y AL+ G +
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A R+ + ITP+ + L++A+ G+ +A F+ M + ++P + ++
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLR 409
+ ++++ A + + G + + TL F + VE+ + RE R
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR 359
>sp|P0C8Q3|PP326_ARATH Pentatricopeptide repeat-containing protein At4g19890
OS=Arabidopsis thaliana GN=At4g19890 PE=2 SV=1
Length = 701
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 114/264 (43%), Gaps = 11/264 (4%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ F+ N+ ++T +I G KK I+ A L M R G+ + T T ++ K G
Sbjct: 278 MIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGW 337
Query: 221 LKMAEETFEEIKLLGEPLDK---RSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
+ A F +KL+ K +Y SM+ Y + L+R E+L M Q ++
Sbjct: 338 TEKAFRLF--LKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNT 395
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y L+ G+ G+ A + + G P+ I++ ++ +AY
Sbjct: 396 YTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAF 455
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
GLE +++ K+N +N+AL F + + GF + L A F R ++
Sbjct: 456 SCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMK 515
Query: 398 EVEHVLR---EYGL---RETYSKI 415
E E + + GL +ETY+ +
Sbjct: 516 ESERLFQLVVSLGLIPTKETYTSM 539
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 78/201 (38%), Gaps = 1/201 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+E F NI Y I KK + A L G D VT T+++ K ++
Sbjct: 421 DEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDIN 480
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A F + G D R ++ A+ R + E L + + + + E Y +++
Sbjct: 481 QALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMI 540
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
Y G+ + A + F ++ G PD+ LI+ +A ++ M GL
Sbjct: 541 SCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLS 600
Query: 343 PSDKC-VALILSACEKENQLN 362
P + V L C++ + N
Sbjct: 601 PPEVTRVTLAYEYCKRNDSAN 621
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 4/152 (2%)
Query: 161 LLEESF----EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYS 216
LL ++F EA+ YT +I K+ I A M + GF D +++ +
Sbjct: 450 LLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFC 509
Query: 217 KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
+ +K +E F+ + LG K +Y SM+ Y + G +D M S
Sbjct: 510 RQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSF 569
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITP 308
Y +L+ G + A +++EA+ G++P
Sbjct: 570 TYGSLISGLCKKSMVDEACKLYEAMIDRGLSP 601
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 75/178 (42%), Gaps = 20/178 (11%)
Query: 219 GNLKMAEE-------TFEEIKLLGEP----LDKRSYG----SMVMAYV-----RAGMLDR 258
GNL+ A E F EI L E +D ++ G S+ M V G+++
Sbjct: 141 GNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEY 200
Query: 259 GEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLIN 318
E + EM + V S YK ++ G +G + A R + G PD C L++
Sbjct: 201 AENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILT 260
Query: 319 AYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
A G +A F+ M G +P+ ++ K+ + +A E L ++ R+G+
Sbjct: 261 ALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGW 318
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/202 (17%), Positives = 74/202 (36%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E+ N+ YT +I+G+ K A + M GF+ + T + K
Sbjct: 386 EQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAP 445
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A E + G D +Y ++ + +++ M+ + L+
Sbjct: 446 EAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILI 505
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
+ + ++R+F+ + G+ P +I+ Y G A F NM++ G
Sbjct: 506 AAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCV 565
Query: 343 PSDKCVALILSACEKENQLNRA 364
P ++S K++ ++ A
Sbjct: 566 PDSFTYGSLISGLCKKSMVDEA 587
Score = 40.8 bits (94), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 76/180 (42%), Gaps = 1/180 (0%)
Query: 186 IQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGS 245
I+ AEN M RG + D + +MV+ + G ++ A+ + G D +
Sbjct: 198 IEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTL 257
Query: 246 MVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAG 305
++ A G+++R R+M + +L+ G G+ + A + E + G
Sbjct: 258 ILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNG 317
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNM-RKAGLEPSDKCVALILSACEKENQLNRA 364
P+ LI+ G ++KA+ F + R +P+ ++ KE++LNRA
Sbjct: 318 WKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRA 377
Score = 36.6 bits (83), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 1/111 (0%)
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
EV + +LR +S G A + +Q G+TP + ++ G + A F
Sbjct: 148 EVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDE 207
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
M G+ P L++ C ++ ++ A +L + + GF + A+CTL
Sbjct: 208 MSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGF-IPDNATCTL 257
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 102/215 (47%), Gaps = 2/215 (0%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ E ++ + ++ G K +++AEN L MK GF+ D T +++ YS +
Sbjct: 278 DHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEA 337
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG-EVLLREMDAQEVYVGSEVYKALL 282
A +E G ++ + ++ A + G +++ E+L REM A+ + +Y ++
Sbjct: 338 ALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREM-AKGLVPNEVIYNTMI 396
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
GY G+ GA+ EA++ G+ PD LI + G+ + A M+ G+
Sbjct: 397 DGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVS 456
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
PS + +++ ++ + ++ + L ++E +G M
Sbjct: 457 PSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTM 491
Score = 68.9 bits (167), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 85/190 (44%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y +I GYG+K + + L M+ G + + V+ ++ K L A+
Sbjct: 458 SVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVK 517
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+++ G R Y ++ G ++ +EM + + + Y L+ G SM
Sbjct: 518 RDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMT 577
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G A+ + I G+ PD LI+ Y AG Q+ ++ M+++G++P+ K
Sbjct: 578 GKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTY 637
Query: 349 ALILSACEKE 358
L++S C KE
Sbjct: 638 HLLISLCTKE 647
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 109/251 (43%), Gaps = 6/251 (2%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G K ++ +AE M R + +T ++ Y KAGN + + + E +K
Sbjct: 217 YNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMK 276
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
++ +++ +AGM++ E +L+EM + + L GYS N +E
Sbjct: 277 ADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAE 336
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A V+E +G+ +A C++L+NA G+ +KA GL P++ ++
Sbjct: 337 AALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMI 396
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLREYGLR--- 409
++ L A + +E+ G A L F LG +E E + + L+
Sbjct: 397 DGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVS 456
Query: 410 ---ETYSKIPG 417
ETY+ + G
Sbjct: 457 PSVETYNILIG 467
Score = 58.9 bits (141), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 90/204 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I GY +K + A + AM+++G D + ++ + + G ++ AE+ ++K
Sbjct: 392 YNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMK 451
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
L G +Y ++ Y R D+ +L+EM+ Y L+
Sbjct: 452 LKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLL 511
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
AQ V ++ G++P R+ +LI+ G+ + A+ + M K G+E + ++
Sbjct: 512 EAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLI 571
Query: 353 SACEKENQLNRALEFLIDLERDGF 376
+L+ A + L+++ R G
Sbjct: 572 DGLSMTGKLSEAEDLLLEISRKGL 595
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 94/230 (40%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
+++ K+ +I+ AE L +G + ++V M+ Y + G+L A E ++ G
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQG 419
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
D +Y ++ + G ++ E + +M + V E Y L+ GY +
Sbjct: 420 MKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCF 479
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
+ + ++ G P+ LIN + +A ++M G+ P + +++ C
Sbjct: 480 DILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGC 539
Query: 356 EKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ ++ A F ++ + G + TL G + E E +L E
Sbjct: 540 CSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLE 589
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 109/250 (43%), Gaps = 6/250 (2%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L++ E N+ Y +I G ++ AE+ LL + R+G D T ++ Y AGN
Sbjct: 555 MLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGN 614
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ +EE+K G ++Y ++ + G ++ E L EM + + VY
Sbjct: 615 VQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-IELTERLFGEMSLKPDLL---VYNG 670
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
+L Y+++G+ E A + + + I D LI G+ + + M
Sbjct: 671 VLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNARE 730
Query: 341 LEP-SDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEV 399
+EP +D ++ CE ++ ++ A + +++ GF++ L + K +E
Sbjct: 731 MEPEADTYNIIVKGHCEVKDYMS-AYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEA 789
Query: 400 EHVLREYGLR 409
E V+ E R
Sbjct: 790 EIVISEMNGR 799
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 8/190 (4%)
Query: 155 QVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
Q+ + + + +R Y +I G K +I++A M ++G + VT ++
Sbjct: 514 QIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDG 573
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
S G L AE+ EI G D +Y S++ Y AG + R L EM +
Sbjct: 574 LSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPT 633
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+ Y L+ + G E +R+F + + PD + +++ Y + G +KA+
Sbjct: 634 LKTYHLLISLCTKEG-IELTERLFGEMS---LKPDLLVYNGVLHCYAVHGDMEKAF---- 685
Query: 335 NMRKAGLEPS 344
N++K +E S
Sbjct: 686 NLQKQMIEKS 695
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 75/192 (39%)
Query: 186 IQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGS 245
I A + A++ G +LT+++ K ++ F I K YG
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184
Query: 246 MVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAG 305
+ A V+ + +G L M +Y +Y L+ G A+++F+ +
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244
Query: 306 ITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
+ P LI+ Y AG +K++ + M+ +EPS +L K + A
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304
Query: 366 EFLIDLERDGFM 377
L +++ GF+
Sbjct: 305 NVLKEMKDLGFV 316
Score = 39.7 bits (91), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 95/239 (39%), Gaps = 38/239 (15%)
Query: 154 LQVAELALLEES---FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTV 210
L AE LLE S + ++ Y +I GYG +Q MKR G T +
Sbjct: 580 LSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHL 639
Query: 211 MVVMYSKAGNLKMAEETFEEIKLLGE--------------------------------PL 238
++ + +K G +++ E F E+ L + L
Sbjct: 640 LISLCTKEG-IELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGL 698
Query: 239 DKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVF 298
DK +Y S+++ ++ G L L+ EM+A+E+ ++ Y +++G+ + A +
Sbjct: 699 DKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWY 758
Query: 299 EAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEK 357
+Q G D + L++ + +S++A M G D V LSA EK
Sbjct: 759 REMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMN--GRMLGDVTVDEDLSATEK 815
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 96/231 (41%), Gaps = 1/231 (0%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRR-GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLL 234
I+HG+ K+ ++++A N + M + GF DQ T +V KAG++K A E + +
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324
Query: 235 GEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGA 294
G D +Y S++ + G + +L +M ++ + Y L+ E A
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384
Query: 295 QRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSA 354
+ + GI PD LI + + A F+ MR G EP + +++ +
Sbjct: 385 TELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDS 444
Query: 355 CEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ +L+ AL L +E G TL F + E E + E
Sbjct: 445 LCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDE 495
Score = 58.5 bits (140), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 88/207 (42%), Gaps = 2/207 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G+ K + + AE M+ G + VT ++ K+ ++ A + +++
Sbjct: 473 YNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMI 532
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ G+ DK +Y S++ + R G + + +++ M + Y L+ G G E
Sbjct: 533 MEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVE 592
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A ++ +IQ GI +I ++ +A F+ M + P D I+
Sbjct: 593 VASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIV 652
Query: 353 --SACEKENQLNRALEFLIDLERDGFM 377
C + A++FL++L GF+
Sbjct: 653 FRGLCNGGGPIREAVDFLVELLEKGFV 679
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 75/169 (44%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I K ++ A N L M+ G +T ++ + KA + AEE F+E++
Sbjct: 438 YNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEME 497
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
+ G + +Y +++ ++ ++ L+ +M + Y +LL + G+ +
Sbjct: 498 VHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIK 557
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
A + +A+ G PD LI+ AG+ + A ++++ G+
Sbjct: 558 KAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGI 606
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/273 (18%), Positives = 100/273 (36%), Gaps = 37/273 (13%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N Y +I K+ Q++ A + +G + D T ++ N ++A E F
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
EE++ G D+ +Y ++ + G LD +L++M+ Y L+ G+
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483
Query: 289 GNSEGAQRVFEAIQFAGIT-----------------------------------PDARMC 313
+ A+ +F+ ++ G++ PD
Sbjct: 484 NKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTY 543
Query: 314 ALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLER 373
L+ + G +KA Q M G EP ++S K ++ A + L ++
Sbjct: 544 NSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQM 603
Query: 374 DGFMVGKEA-SCTLAAWFKRLGVVEEVEHVLRE 405
G + A + + F++ E + ++ RE
Sbjct: 604 KGINLTPHAYNPVIQGLFRKRKTTEAI-NLFRE 635
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/201 (18%), Positives = 89/201 (44%), Gaps = 1/201 (0%)
Query: 211 MVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQE 270
M+ + +LK+ E + ++ + G D ++ ++ A RA L ++L +M +
Sbjct: 160 MLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYG 219
Query: 271 VYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAY 330
+ + + +++GY G+ +GA R+ E + G + ++++ + G+ + A
Sbjct: 220 LVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDAL 279
Query: 331 TAFQNM-RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAW 389
Q M + G P +++ K + A+E + + ++G+ ++ +
Sbjct: 280 NFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISG 339
Query: 390 FKRLGVVEEVEHVLREYGLRE 410
+LG V+E VL + R+
Sbjct: 340 LCKLGEVKEAVEVLDQMITRD 360
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 116/252 (46%), Gaps = 18/252 (7%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPLYLQVAELALLEESFEANIRD 172
+SP S L+ ++V+ K R AD L LK++ ++ N
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQL--LKEM----------------MQRGIAPNTIT 370
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G+ K+ +++ A + M +G D +T +++ Y KA + E F E+
Sbjct: 371 YNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMS 430
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
L G + +Y ++V + ++G L+ + L +EM ++ V YK LL G NG E
Sbjct: 431 LRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELE 490
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +F I+ + + D + ++I+ A + A+ F ++ G++ + +++
Sbjct: 491 KALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMI 550
Query: 353 SACEKENQLNRA 364
S +++ L++A
Sbjct: 551 SELCRKDSLSKA 562
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 105/245 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E F+ N Y +++ K Q A L M+ R D V ++++ K G+
Sbjct: 219 MVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGS 278
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A F E+++ G D +Y +++ + AG D G LLR+M +++ +
Sbjct: 279 LDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSV 338
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ + G A ++ + + GI P+ LI+ + + ++A M G
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
+P ++++ K N+++ LE ++ G + TL F + G +E +
Sbjct: 399 CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAK 458
Query: 401 HVLRE 405
+ +E
Sbjct: 459 KLFQE 463
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 88/182 (48%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ N+ ++ +I + K+ +++ A+ L M +RG + +T ++ + K
Sbjct: 324 MIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENR 383
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L+ A + + + G D ++ ++ Y +A +D G L REM + V + Y
Sbjct: 384 LEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNT 443
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L++G+ +G E A+++F+ + + PD +L++ G+ +KA F + K+
Sbjct: 444 LVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSK 503
Query: 341 LE 342
+E
Sbjct: 504 ME 505
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 89/196 (45%), Gaps = 1/196 (0%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
+++G ++ +A + M GF ++VT ++ + K+G +A E +++
Sbjct: 199 LVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERN 258
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
LD Y ++ + G LD L EM+ + Y L+ G+ G +
Sbjct: 259 IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGA 318
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
++ + I+P+ ++LI+++ G+ ++A + M + G+ P+ ++
Sbjct: 319 KLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGF 378
Query: 356 EKENQLNRALEFLIDL 371
KEN+L A++ ++DL
Sbjct: 379 CKENRLEEAIQ-MVDL 393
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 211 MVVMYS--KAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDA 268
M++++ A + A + F + L G LD R+Y M+ R L + ++L R+M
Sbjct: 512 MIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKM-T 570
Query: 269 QEVYVGSEV-YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQ 327
+E + E+ Y L+R + + ++ A + E ++ +G D ++IN +G+
Sbjct: 571 EEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLS-SGELD 629
Query: 328 KAYTAFQNMRKAGLE 342
K++ + +A L+
Sbjct: 630 KSFLDMLSTTRASLK 644
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/216 (17%), Positives = 93/216 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ +E + + +++G + ++ A + M G +TL +V G
Sbjct: 149 IMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGK 208
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A + + G ++ +YG ++ ++G LLR+M+ + + + + Y
Sbjct: 209 VSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 268
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G +G+ + A +F ++ G D LI + AG+ ++M K
Sbjct: 269 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
+ P+ ++++ + KE +L A + L ++ + G
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI 364
Score = 35.8 bits (81), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 44/238 (18%), Positives = 89/238 (37%), Gaps = 8/238 (3%)
Query: 172 DYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEI 231
D+ ++ K Q + M+ +G TL++M+ + + L A T +I
Sbjct: 90 DFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKI 149
Query: 232 KLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE----VYKALLRGYSM 287
LG D + +++ + L+ M V +G + L+ G +
Sbjct: 150 MKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRM----VEMGHKPTLITLNTLVNGLCL 205
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
NG A + + + G P+ ++N +GQ+ A + M + ++
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
++I+ K+ L+ A ++E GF TL F G ++ +LR+
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRD 323
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 94/215 (43%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+LE ++ Y +I G + +A L M RG + DQ T T M+ K+
Sbjct: 453 MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKR 512
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ A + F+ ++ G + Y +++ Y +AG +D ++L +M ++ S + A
Sbjct: 513 VEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNA 572
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G +G + A + E + G+ P +LI+ G AY+ FQ M +G
Sbjct: 573 LIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG 632
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+P + +E +L A + + + +G
Sbjct: 633 TKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENG 667
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 81/186 (43%)
Query: 159 LALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKA 218
+ +LE+ NI Y K+++GY K ++ A + + G D T T +++ Y +
Sbjct: 207 MEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQR 266
Query: 219 GNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVY 278
+L A + F E+ L G ++ +Y ++ A +D L +M E + Y
Sbjct: 267 KDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTY 326
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
L++ + A + + ++ GI P+ +LI++ + +KA M +
Sbjct: 327 TVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLE 386
Query: 339 AGLEPS 344
GL P+
Sbjct: 387 KGLMPN 392
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/182 (20%), Positives = 84/182 (46%), Gaps = 1/182 (0%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E + NI YT +I + + + A L M +G + + +T ++ Y K G ++
Sbjct: 351 ETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIE 410
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A + E ++ + R+Y ++ Y ++ + + +L +M ++V Y +L+
Sbjct: 411 DAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLI 469
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G +GN + A R+ + G+ PD +I++ + + ++A F ++ + G+
Sbjct: 470 DGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVN 529
Query: 343 PS 344
P+
Sbjct: 530 PN 531
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 83/184 (45%), Gaps = 1/184 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+LE+ N+ Y +I+GY K+ I++A + + M+ R + T ++ Y K+ N
Sbjct: 384 MLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-N 442
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A ++ D +Y S++ R+G D LL M+ + + Y +
Sbjct: 443 VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTS 502
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ + E A +F++++ G+ P+ M LI+ Y AG+ +A+ + M
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562
Query: 341 LEPS 344
P+
Sbjct: 563 CLPN 566
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 77/185 (41%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+L ++ N+ YT +I GY K ++ A L M + + + +T ++ G
Sbjct: 522 SLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADG 581
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYK 279
LK A E++ +G + ++ ++ G D ++M + + Y
Sbjct: 582 KLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYT 641
Query: 280 ALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKA 339
++ Y G A+ + ++ G++PD + LI Y GQ+ A+ + MR
Sbjct: 642 TFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDT 701
Query: 340 GLEPS 344
G EPS
Sbjct: 702 GCEPS 706
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 102/253 (40%), Gaps = 7/253 (2%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
N R Y ++I GY K + A L M R + D VT ++ ++GN A
Sbjct: 427 NTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ G D+ +Y SM+ + ++ ++ L ++ + V +Y AL+ GY
Sbjct: 486 SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKA 545
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A + E + P++ LI+ G+ ++A + M K GL+P+
Sbjct: 546 GKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTD 605
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV---LRE 405
+++ K+ + A + G T + R G + + E + +RE
Sbjct: 606 TILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRE 665
Query: 406 YGLRE---TYSKI 415
G+ TYS +
Sbjct: 666 NGVSPDLFTYSSL 678
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 91/220 (41%), Gaps = 4/220 (1%)
Query: 202 ICDQV-TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGE 260
+C + T MV Y K GN++ A + +I G D +Y S++M Y + LD
Sbjct: 214 VCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAF 273
Query: 261 VLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAY 320
+ EM + Y L+ G + + A +F ++ P R +LI +
Sbjct: 274 KVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSL 333
Query: 321 QMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGK 380
+ + +A + M + G++P+ +++ + + + +A E L + G M
Sbjct: 334 CGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNV 393
Query: 381 EASCTLAAWFKRLGVVEEVEHVLREYGLRETYSKIPGSRS 420
L + + G++E+ V+ L E+ P +R+
Sbjct: 394 ITYNALINGYCKRGMIEDAVDVVE---LMESRKLSPNTRT 430
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 99/249 (39%), Gaps = 15/249 (6%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+E F +R YT +I + A N + M+ G + T TV++ +
Sbjct: 317 DECF-PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFE 375
Query: 223 MAEETFEEIKLLGEPLDKR------SYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSE 276
A E LLG+ L+K +Y +++ Y + GM++ ++ M+++++ +
Sbjct: 376 KARE------LLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTR 429
Query: 277 VYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNM 336
Y L++GY N A V + + PD LI+ +G AY M
Sbjct: 430 TYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLM 488
Query: 337 RKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVV 396
GL P ++ + K ++ A + LE+ G L + + G V
Sbjct: 489 NDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKV 548
Query: 397 EEVEHVLRE 405
+E H++ E
Sbjct: 549 DEA-HLMLE 556
Score = 41.2 bits (95), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 54/132 (40%)
Query: 243 YGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQ 302
Y +++ + R G++D + + EM +V Y ++ GY GN E A + I
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 303 FAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLN 362
AG+ PD LI Y A+ F M G ++ ++ +++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 363 RALEFLIDLERD 374
A++ + ++ D
Sbjct: 306 EAMDLFVKMKDD 317
Score = 40.8 bits (94), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 90/241 (37%), Gaps = 24/241 (9%)
Query: 155 QVAELALLEE-----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLT 209
++ E LLEE + + T +IH K +A + M G D T T
Sbjct: 582 KLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYT 641
Query: 210 VMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQ 269
+ Y + G L AE+ +++ G D +Y S++ Y G + +L+ M
Sbjct: 642 TFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDT 701
Query: 270 EVYVGSEVYKALLRG-----YSMNGNSE-------------GAQRVFEAIQFAGITPDAR 311
+ +L++ Y SE + E + +TP+A+
Sbjct: 702 GCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAK 761
Query: 312 MCALLINAYQMAGQSQKAYTAFQNM-RKAGLEPSDKCVALILSACEKENQLNRALEFLID 370
LI G + A F +M R G+ PS+ +LS C K + N A + + D
Sbjct: 762 SYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDD 821
Query: 371 L 371
+
Sbjct: 822 M 822
>sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containing protein At3g15930
OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2
Length = 687
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 110/242 (45%), Gaps = 17/242 (7%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ +T I+ GY ++ ++ A M R D+++ T+M+ Y +AG + E F
Sbjct: 301 DVISWTSIVKGYVERGNLKLARTYFDQMPVR----DRISWTIMIDGYLRAGCFNESLEIF 356
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E++ G D+ + S++ A G L+ GE + +D ++ V AL+ Y
Sbjct: 357 REMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKC 416
Query: 289 GNSEGAQRVFEAI-QFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKC 347
G SE AQ+VF + Q T A + L N GQ Q+A F M+ ++P D
Sbjct: 417 GCSEKAQKVFHDMDQRDKFTWTAMVVGLANN-----GQGQEAIKVFFQMQDMSIQPDDIT 471
Query: 348 VALILSACEKENQLNRALEFLIDLERDGFMVGKEASCT----LAAWFKRLGVVEEVEHVL 403
+LSAC +++A +F + D + E S + R G+V+E +L
Sbjct: 472 YLGVLSACNHSGMVDQARKFFAKMRSDHRI---EPSLVHYGCMVDMLGRAGLVKEAYEIL 528
Query: 404 RE 405
R+
Sbjct: 529 RK 530
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 85/187 (45%), Gaps = 8/187 (4%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ + +I GY + + + + L+ M+R VTL +++ SK + + +
Sbjct: 200 DVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVH 259
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E + R ++V AY G +D + R M A++V + ++++GY
Sbjct: 260 EYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVI----SWTSIVKGYVER 315
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
GN + A+ F+ + D ++I+ Y AG ++ F+ M+ AG+ P + +
Sbjct: 316 GNLKLARTYFDQMP----VRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTM 371
Query: 349 ALILSAC 355
+L+AC
Sbjct: 372 VSVLTAC 378
>sp|Q9SVH3|PP328_ARATH Pentatricopeptide repeat-containing protein At4g20740
OS=Arabidopsis thaliana GN=At4g20740 PE=3 SV=1
Length = 727
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 109/247 (44%), Gaps = 9/247 (3%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
+Y E L+EES + ++ G K +I+ L M+ D T M
Sbjct: 250 VYEDFKEDGLVEES-----TTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAM 304
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEV 271
+ GNL + ++E++ D +YG++V+ + G ++RG L EM +++
Sbjct: 305 IKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQI 364
Query: 272 YVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYT 331
+ E+Y+ L+ G+ +G A ++E + +G D + +I Q KAY
Sbjct: 365 LIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYK 424
Query: 332 AFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFK 391
FQ + LEP + ++ I+ A +NR +F LER G +G S L +FK
Sbjct: 425 LFQVAIEEELEPDFETLSPIMVAYV---VMNRLSDFSNVLERIG-ELGYPVSDYLTQFFK 480
Query: 392 RLGVVEE 398
L EE
Sbjct: 481 LLCADEE 487
Score = 38.9 bits (89), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 55/137 (40%), Gaps = 2/137 (1%)
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
Y A + NG+ A ++ E + G P + +LI + + + Y ++ M+
Sbjct: 161 YNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMK 220
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
K G +P I+ A K + AL D + DG + L + G +E
Sbjct: 221 KFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIE 280
Query: 398 EVEHVLREYGLRETYSK 414
E+ +L+ +RE K
Sbjct: 281 EMLEILQR--MRENLCK 295
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 84/177 (47%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
++ Y+ +I+GY K ++++ M +RG + + VT T+++ Y +AG L +AEE F
Sbjct: 325 DVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIF 384
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
+ G + +Y ++ G +++ V+L +M + Y ++RG
Sbjct: 385 RRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKA 444
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
G A ++ ++ G+ PD ++ G ++A F+ M++ G+ P++
Sbjct: 445 GEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 81/183 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ S + +I Y+ +I+G ++ AE M +G D VT ++++ Y K+
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKK 341
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
++ + F E+ G + +Y ++ Y RAG L+ E + R M V+ Y
Sbjct: 342 VEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNV 401
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL G NG E A + +Q G+ D ++I AG+ A+ + ++ G
Sbjct: 402 LLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQG 461
Query: 341 LEP 343
L P
Sbjct: 462 LMP 464
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 103/240 (42%), Gaps = 6/240 (2%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMV---VMYSKAGNLKMAE 225
++ + +I K+ ++ AE M RR D VT ++++ MYS+ L AE
Sbjct: 255 DVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSR---LDEAE 311
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
E F + G D +Y ++ Y ++ ++ G L EM + V + Y L++GY
Sbjct: 312 EMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGY 371
Query: 286 SMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD 345
G A+ +F + F G+ P+ +L++ G+ +KA +M+K G++
Sbjct: 372 CRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADI 431
Query: 346 KCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+I+ K ++ A + L G M T+ + G+ E + + R+
Sbjct: 432 VTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRK 491
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 86/213 (40%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
++ ++ Y +I G + +A + M +R D T ++ K G +
Sbjct: 214 KDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVS 273
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
AEE +EE+ D +Y ++ LD E + M ++ + Y L+
Sbjct: 274 EAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILI 333
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
GY + E ++F + G+ + +LI Y AG+ A F+ M G+
Sbjct: 334 NGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVH 393
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDG 375
P+ ++L ++ +AL L D++++G
Sbjct: 394 PNIITYNVLLHGLCDNGKIEKALVILADMQKNG 426
Score = 40.8 bits (94), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 52/307 (16%), Positives = 117/307 (38%), Gaps = 17/307 (5%)
Query: 115 PETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHPL---------YLQVAELAL---- 161
P + S LL+A + K +L Q+ + H L + + ++L+L
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 162 ----LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSK 217
++ E +I + +++G+ + ++ +A M G+ + V ++ K
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 218 AGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEV 277
+ + A + ++ G D +Y S++ +G ++ M +E+Y
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 278 YKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
+ AL+ G A+ +E + + PD +LLI M + +A F M
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 338 KAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVE 397
G P +++++ K ++ ++ ++ + G + L + R G +
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378
Query: 398 EVEHVLR 404
E + R
Sbjct: 379 VAEEIFR 385
>sp|P0C8A0|PP275_ARATH Pentatricopeptide repeat-containing protein At3g49730
OS=Arabidopsis thaliana GN=At3g49730 PE=2 SV=1
Length = 638
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 93/197 (47%), Gaps = 2/197 (1%)
Query: 208 LTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMD 267
V++ ++ A +K A E +E+ G D+ +G ++ A + G + + +M
Sbjct: 170 FVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDM- 228
Query: 268 AQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQ 327
++ + +LL G+ G A+ V ++ AG+ PD + L++ Y AG+
Sbjct: 229 REKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMA 288
Query: 328 KAYTAFQNMRKAGLEPSDKCVALILSA-CEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
AY +MRK G EP+ C +++ A C E +++ A+ +++ER G L
Sbjct: 289 DAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTAL 348
Query: 387 AAWFKRLGVVEEVEHVL 403
+ F + G++++ VL
Sbjct: 349 ISGFCKWGMIDKGYSVL 365
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 87/214 (40%), Gaps = 34/214 (15%)
Query: 162 LEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNL 221
+ E F N+R +T +++G+ ++ ++ A+ L+ MK G D V T ++ Y+ AG +
Sbjct: 228 MREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKM 287
Query: 222 KMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKAL 281
A + +++ G + Y ++ A R + MD
Sbjct: 288 ADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTE---------KRMDE------------- 325
Query: 282 LRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGL 341
A RVF ++ G D LI+ + G K Y+ +MRK G+
Sbjct: 326 ------------AMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGV 373
Query: 342 EPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
PS I+ A EK+ Q LE + ++R G
Sbjct: 374 MPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRG 407
Score = 45.4 bits (106), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 57/123 (46%)
Query: 167 EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEE 226
EA+I YT +I G+ K I + L M+++G + QVT ++V + K + E
Sbjct: 339 EADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLE 398
Query: 227 TFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
E++K G D Y ++ + G + L EM+A + G + + ++ G++
Sbjct: 399 LIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFT 458
Query: 287 MNG 289
G
Sbjct: 459 SQG 461
Score = 33.5 bits (75), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
Query: 276 EVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQN 335
E++ L+R ++ + A V + + G+ PD + L++A G ++A F++
Sbjct: 168 ELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFED 227
Query: 336 MRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
MR+ P+ + +L +E +L A E L+ ++ G
Sbjct: 228 MREK-FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGL 267
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 99/216 (45%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ + E +I Y+ +I+ Y K ++ + + +G I + +T +V+ + ++G
Sbjct: 376 MVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 435
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A+E F+E+ G P +YG ++ G L++ + +M + +G +Y
Sbjct: 436 LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 495
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
++ G + A +F ++ G+ PD ++I G +A F+ M++ G
Sbjct: 496 IIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 555
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGF 376
P D +++ A + L ++E + +++ GF
Sbjct: 556 CTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGF 591
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 89/216 (41%)
Query: 164 ESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKM 223
+ +A++ Y+ +I G + + L M R I D VT + ++ ++ K G L
Sbjct: 274 KGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLE 333
Query: 224 AEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLR 283
A+E + E+ G D +Y S++ + + L + M ++ Y L+
Sbjct: 334 AKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILIN 393
Query: 284 GYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEP 343
Y + R+F I G+ P+ L+ + +G+ A FQ M G+ P
Sbjct: 394 SYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPP 453
Query: 344 SDKCVALILSACEKENQLNRALEFLIDLERDGFMVG 379
S ++L +LN+ALE +++ +G
Sbjct: 454 SVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLG 489
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 92/203 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G+ K+ + A M +G D VT ++++ Y KA + F EI
Sbjct: 353 YNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREIS 412
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G + +Y ++V+ + ++G L+ + L +EM ++ V Y LL G NG
Sbjct: 413 SKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELN 472
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A +FE +Q + +T + ++I+ A + A++ F ++ G++P +++
Sbjct: 473 KALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMI 532
Query: 353 SACEKENQLNRALEFLIDLERDG 375
K+ L+ A ++ DG
Sbjct: 533 GGLCKKGSLSEADMLFRKMKEDG 555
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/245 (19%), Positives = 98/245 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E F+ + Y +++ K A + M+ R V ++++ K G+
Sbjct: 201 MVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGS 260
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
A F E+++ G D +Y S++ G D G +LREM + + + A
Sbjct: 261 FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSA 320
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ + G A+ ++ + GI PD LI+ + +A F M G
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVE 400
EP ++++++ K +++ + ++ G + TL F + G + +
Sbjct: 381 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 440
Query: 401 HVLRE 405
+ +E
Sbjct: 441 ELFQE 445
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 79/191 (41%)
Query: 174 TKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKL 233
+ +I+G K ++ A + M GF D+VT ++ K+GN +A + F +++
Sbjct: 179 STLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEE 238
Query: 234 LGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEG 293
Y ++ + + G D L EM+ + + Y +L+ G +G +
Sbjct: 239 RNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDD 298
Query: 294 AQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILS 353
++ + I PD + LI+ + G+ +A + M G+ P ++
Sbjct: 299 GAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLID 358
Query: 354 ACEKENQLNRA 364
KEN L+ A
Sbjct: 359 GFCKENCLHEA 369
Score = 38.1 bits (87), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/201 (18%), Positives = 76/201 (37%), Gaps = 12/201 (5%)
Query: 176 IIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLG 235
++ G+ K M++ E+ D T+T+M+ Y + L A LG
Sbjct: 88 LVLGFCKGMELNGIEH------------DMYTMTIMINCYCRKKKLLFAFSVLGRAWKLG 135
Query: 236 EPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQ 295
D ++ ++V + G + L+ M + L+ G + G A
Sbjct: 136 YEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEAL 195
Query: 296 RVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSAC 355
+ + + G PD ++N +G S A F+ M + ++ S ++++ +
Sbjct: 196 VLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSL 255
Query: 356 EKENQLNRALEFLIDLERDGF 376
K+ + AL ++E G
Sbjct: 256 CKDGSFDDALSLFNEMEMKGI 276
>sp|Q8S8P6|PP180_ARATH Pentatricopeptide repeat-containing protein At2g32630
OS=Arabidopsis thaliana GN=At2g32630 PE=3 SV=1
Length = 624
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 100/233 (42%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y II+ Y K+ E L MK+ G + ++VT T+++ + K G + AE+ F+E++
Sbjct: 262 YNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMR 321
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
G D Y S++ R G + R +L E+ + + S Y AL+ G G
Sbjct: 322 ERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMG 381
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A+ + +Q G+ + LI+ Y G +A + M + G + I
Sbjct: 382 AAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIA 441
Query: 353 SACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
S + + + A ++L + G + + L + + G VEE + + E
Sbjct: 442 SCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVE 494
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 88/192 (45%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
++ F+A++ I + + + A+ L M G V+ T ++ +Y K GN++
Sbjct: 427 QKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVE 486
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A+ F E+ G + +Y M+ AY + G + L M+A + S Y +L+
Sbjct: 487 EAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLI 546
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G + N + A R+F + G+ ++ ++I+ AG+S +A+ + M++ G
Sbjct: 547 HGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYT 606
Query: 343 PSDKCVALILSA 354
+K ++ +
Sbjct: 607 IDNKVYTALIGS 618
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 110/265 (41%), Gaps = 22/265 (8%)
Query: 113 VSPETGNLSDLLAAWVRFMKPRRADWLAVLKQLKLMEHP--LYLQVAELALLEESFEANI 170
+ PE + ++ A+V+ + D+ V LK+M+ +Y +V L+E S
Sbjct: 255 IKPEAYTYNTIINAYVK-----QRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSV---- 305
Query: 171 RDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEE 230
K ++ +AE M+ RG D T ++ + GN+K A F+E
Sbjct: 306 -----------KNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDE 354
Query: 231 IKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGN 290
+ G +YG+++ + G + E+L+ EM ++ V + V+ L+ GY G
Sbjct: 355 LTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGM 414
Query: 291 SEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVAL 350
+ A +++ ++ G D C + + + + +A M + G++ S
Sbjct: 415 VDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTN 474
Query: 351 ILSACEKENQLNRALEFLIDLERDG 375
++ KE + A +++ G
Sbjct: 475 LIDVYCKEGNVEEAKRLFVEMSSKG 499
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 73/159 (45%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E + + YT +I Y K+ ++ A+ + M +G + +T VM+ Y K G
Sbjct: 460 MMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGK 519
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+K A + ++ G D +Y S++ A +D L EM + + S Y
Sbjct: 520 IKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTV 579
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
++ G S G S+ A +++ ++ G T D ++ LI +
Sbjct: 580 MISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGS 618
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 88/196 (44%)
Query: 207 TLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM 266
+LT++V + G ++ +++ +E + G + +Y +++ AYV+ E +L+ M
Sbjct: 226 SLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVM 285
Query: 267 DAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQS 326
V Y L+ NG A+++F+ ++ GI D + LI+ G
Sbjct: 286 KKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNM 345
Query: 327 QKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTL 386
++A+ F + + GL PS ++ K ++ A + +++ G + + TL
Sbjct: 346 KRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTL 405
Query: 387 AAWFKRLGVVEEVEHV 402
+ R G+V+E +
Sbjct: 406 IDGYCRKGMVDEASMI 421
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 1/200 (0%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
L E+ + Y +I G K ++ AE + M+ +G QV ++ Y + G
Sbjct: 355 LTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGM 414
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A ++ ++ G D + ++ + R D + L M V + + Y
Sbjct: 415 VDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTN 474
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ Y GN E A+R+F + G+ P+A ++I AY G+ ++A NM G
Sbjct: 475 LIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANG 534
Query: 341 LEP-SDKCVALILSACEKEN 359
++P S +LI C +N
Sbjct: 535 MDPDSYTYTSLIHGECIADN 554
Score = 39.3 bits (90), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 76/183 (41%), Gaps = 4/183 (2%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M ++G D+ + V +V K + + E F + G + S +V R G
Sbjct: 180 MVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGE 239
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
+++ + L++E + + + Y ++ Y + G + V + ++ G+ + L
Sbjct: 240 VEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTL 299
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV--ALILSACEKENQLNRALEFLIDLER 373
L+ G+ A F MR+ G+E SD V +LI C K N + RA +L
Sbjct: 300 LMELSVKNGKMSDAEKLFDEMRERGIE-SDVHVYTSLISWNCRKGN-MKRAFLLFDELTE 357
Query: 374 DGF 376
G
Sbjct: 358 KGL 360
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 95/215 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+++ S + NI Y +I+G+ ++ A+ M + + D VT ++ + KA
Sbjct: 336 MIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKK 395
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ E F ++ G + +Y +++ + +A D +++ ++M + V+ Y
Sbjct: 396 VVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNT 455
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL G NG E A VFE +Q + + PD ++ AG+ + + F ++ G
Sbjct: 456 LLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKG 515
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
++P ++S K+ A I ++ DG
Sbjct: 516 VKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDG 550
Score = 58.5 bits (140), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 100/238 (42%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+LE N+ + +I + K+ ++ AE M +R + VT ++ +
Sbjct: 301 MLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDR 360
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
L A++ F + D +Y +++ + +A + G L R+M + + + Y
Sbjct: 361 LDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTT 420
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G+ + + AQ VF+ + G+ P+ L++ G+ +KA F+ ++K+
Sbjct: 421 LIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSK 480
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEE 398
+EP ++ K ++ + L G A T+ + F + G+ EE
Sbjct: 481 MEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEE 538
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 67/170 (39%)
Query: 168 ANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEET 227
N YT +IHG+ + NA+ M G + +T ++ K G L+ A
Sbjct: 413 GNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 472
Query: 228 FEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSM 287
FE ++ D +Y M +AG ++ G L + + V Y ++ G+
Sbjct: 473 FEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCK 532
Query: 288 NGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMR 337
G E A +F ++ G PD+ LI A+ G + + MR
Sbjct: 533 KGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMR 582
Score = 34.3 bits (77), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 35/184 (19%), Positives = 74/184 (40%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++E ++ + +T ++HG + + A + M +G D VT ++ K G
Sbjct: 161 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 220
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+A +++ D Y +++ + + +D L EMD + + Y +
Sbjct: 221 PDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSS 280
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
L+ G A R+ + I P+ LI+A+ G+ +A F M +
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS 340
Query: 341 LEPS 344
++P+
Sbjct: 341 IDPN 344
>sp|Q9ZUA2|PP141_ARATH Pentatricopeptide repeat-containing protein At2g01740
OS=Arabidopsis thaliana GN=At2g01740 PE=3 SV=1
Length = 559
Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/264 (19%), Positives = 113/264 (42%), Gaps = 45/264 (17%)
Query: 150 HPLYLQVAELALLEESF----------EANIRDYTKIIHGYGKKMQIQNAENTLLAMKRR 199
+ L+ +++ +L+E F N+ Y+ I + K ++Q A + +MKR
Sbjct: 133 NSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRD 192
Query: 200 GFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRG 259
+ VT T ++ Y KAG+L++A ++E++ + L+ +Y +++ + + G + R
Sbjct: 193 ALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRA 252
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQR----------------------- 296
E + M V S VY ++ G+ G+S+ A +
Sbjct: 253 EEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISG 312
Query: 297 ------------VFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPS 344
+ E ++ + + PD + ++NAY +G+ + A + + + G EP
Sbjct: 313 LCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPD 372
Query: 345 DKCVALILSACEKENQLNRALEFL 368
++ ++ K QL+ A+ +
Sbjct: 373 VVALSTMIDGIAKNGQLHEAIVYF 396
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 105/261 (40%), Gaps = 41/261 (15%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
+L + +I Y II G +++ A + M++ + D V T M+ Y K+G
Sbjct: 294 MLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGR 353
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+K A + ++ G D + +M+ + G L V A +V +Y
Sbjct: 354 MKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDV-----MYTV 408
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPD--------ARMC--ALLINAYQMAGQSQK-- 328
L+ G+ +R+F I AG+ PD A +C L++A+++ + +
Sbjct: 409 LIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEG 468
Query: 329 ------AYTA-----------------FQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
AYT F M +G+ P L++ A EKE + A
Sbjct: 469 LLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAAS 528
Query: 366 EFLIDLERDGFMVG-KEASCT 385
+ L+D++R G + +A C+
Sbjct: 529 DLLLDMQRRGLVTAVSDADCS 549
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 124/296 (41%), Gaps = 26/296 (8%)
Query: 93 SQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWV--RFMKPRRADWLAV------LKQ 144
S P T C + Q+I + G LS A++ R P R+ + +V L Q
Sbjct: 16 SNLPDPFT--CNKHIHQLI--NSNCGILSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQ 71
Query: 145 LKLMEHPLYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMK-RRGFIC 203
+K E ++ ++ E ++ Y +I G+ + I++A L +++ GFIC
Sbjct: 72 VKFAEDIVH------SMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFIC 125
Query: 204 --DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKR--SYGSMVMAYVRAGMLDRG 259
D V+ + +SK +KM +E F + ++ + +Y + + + ++G L
Sbjct: 126 KPDIVSFNSLFNGFSK---MKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLA 182
Query: 260 EVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINA 319
M + + L+ GY G+ E A +++ ++ ++ + LI+
Sbjct: 183 LKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDG 242
Query: 320 YQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+ G+ Q+A + M + +EP+ I+ + + A++FL + G
Sbjct: 243 FCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQG 298
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 85/180 (47%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M++ G + D VT T++V KAGN A +T + ++ G + +Y +++ +R
Sbjct: 354 MEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHR 413
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
LD L M++ V + Y + Y +G+S A FE ++ GI P+ C
Sbjct: 414 LDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNA 473
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+ + AG+ ++A F ++ GL P +++ K +++ A++ L ++ +G
Sbjct: 474 SLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENG 533
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 95/205 (46%), Gaps = 1/205 (0%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y +I G + I+ A++ L +K G I D T ++ Y K+G + E ++E+
Sbjct: 788 YNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMS 847
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLRE-MDAQEVYVGSEVYKALLRGYSMNGNS 291
+ ++ ++ V+AG +D L + M ++ + Y L+ G S +G
Sbjct: 848 THECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRL 907
Query: 292 EGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALI 351
A+++FE + G P+ + +LIN + AG++ A F+ M K G+ P K +++
Sbjct: 908 YEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVL 967
Query: 352 LSACEKENQLNRALEFLIDLERDGF 376
+ +++ L + +L+ G
Sbjct: 968 VDCLCMVGRVDEGLHYFKELKESGL 992
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 80/186 (43%), Gaps = 1/186 (0%)
Query: 160 ALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAG 219
+L+ N Y +I+G+GK + A M + G D T +V+V G
Sbjct: 916 GMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVG 975
Query: 220 NLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREM-DAQEVYVGSEVY 278
+ F+E+K G D Y ++ ++ L+ VL EM ++ + Y
Sbjct: 976 RVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTY 1035
Query: 279 KALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRK 338
+L+ + G E A +++ IQ AG+ P+ LI Y ++G+ + AY +Q M
Sbjct: 1036 NSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVT 1095
Query: 339 AGLEPS 344
G P+
Sbjct: 1096 GGFSPN 1101
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 95/215 (44%)
Query: 161 LLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGN 220
++ E F +++ Y+ ++ G GK+ I + L M+ G + T T+ + + +AG
Sbjct: 214 MILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGK 273
Query: 221 LKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKA 280
+ A E + + G D +Y ++ A A LD + + +M Y
Sbjct: 274 INEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYIT 333
Query: 281 LLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAG 340
LL +S N + + ++ + ++ G PD +L++A AG +A+ MR G
Sbjct: 334 LLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQG 393
Query: 341 LEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+ P+ ++ + ++L+ ALE ++E G
Sbjct: 394 ILPNLHTYNTLICGLLRVHRLDDALELFGNMESLG 428
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 95/221 (42%), Gaps = 18/221 (8%)
Query: 152 LYLQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVM 211
++LQV + + + Y ++ YGK +I M + +T ++
Sbjct: 807 VFLQVKSTGCIPD-----VATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIV 861
Query: 212 VVMYSKAGNLKMAEETFEEIKLLGEPLDKR-------SYGSMVMAYVRAGMLDRGEVLLR 264
+ KAGN+ A + + ++ + R +YG ++ ++G L + L
Sbjct: 862 ISGLVKAGNVDDALDLYYDL------MSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFE 915
Query: 265 EMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAG 324
M +Y L+ G+ G ++ A +F+ + G+ PD + ++L++ M G
Sbjct: 916 GMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVG 975
Query: 325 QSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRAL 365
+ + F+ ++++GL P C LI++ K ++L AL
Sbjct: 976 RVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEAL 1016
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/243 (19%), Positives = 95/243 (39%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
+E ++ YT +I ++ A+ MK D+VT ++ +S +L
Sbjct: 286 DEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLD 345
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
++ + E++ G D ++ +V A +AG L M Q + Y L+
Sbjct: 346 SVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLI 405
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
G + A +F ++ G+ P A + I+ Y +G S A F+ M+ G+
Sbjct: 406 CGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIA 465
Query: 343 PSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRLGVVEEVEHV 402
P+ L + K + A + L+ G + + + ++G ++E +
Sbjct: 466 PNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKL 525
Query: 403 LRE 405
L E
Sbjct: 526 LSE 528
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 75/190 (39%), Gaps = 4/190 (2%)
Query: 159 LALLEE----SFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVM 214
+ LL+E + N+ +T I G+ +I A L M G D VT TV++
Sbjct: 243 MGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDA 302
Query: 215 YSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVG 274
A L A+E FE++K D+ +Y +++ + LD + EM+
Sbjct: 303 LCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPD 362
Query: 275 SEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQ 334
+ L+ GN A + ++ GI P+ LI + A F
Sbjct: 363 VVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFG 422
Query: 335 NMRKAGLEPS 344
NM G++P+
Sbjct: 423 NMESLGVKPT 432
Score = 41.6 bits (96), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 88/240 (36%), Gaps = 5/240 (2%)
Query: 169 NIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETF 228
NI ++ K + + A+ +K G + D VT +M+ YSK G + A +
Sbjct: 467 NIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLL 526
Query: 229 EEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMN 288
E+ G D S++ +A +D + M ++ Y LL G N
Sbjct: 527 SEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKN 586
Query: 289 GNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCV 348
G + A +FE + G P+ L + + A M G P
Sbjct: 587 GKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTY 646
Query: 349 ALILSACEKENQLNRALEFLIDLERDGFMVGKE--ASCTLAAWFKRLGVVEEVEHVLREY 406
I+ K Q+ A+ F +++ +V + CTL + ++E+ ++ +
Sbjct: 647 NTIIFGLVKNGQVKEAMCFFHQMKK---LVYPDFVTLCTLLPGVVKASLIEDAYKIITNF 703
Score = 39.3 bits (90), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 79/203 (38%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y I K ++ A L M+ GF+ + + ++ + K+ A E + +
Sbjct: 156 YLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMI 215
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSE 292
L G ++Y S+++ + +D LL+EM+ + + +R G
Sbjct: 216 LEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKIN 275
Query: 293 GAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALIL 352
A + + + G PD +LI+A A + A F+ M+ +P +L
Sbjct: 276 EAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLL 335
Query: 353 SACEKENQLNRALEFLIDLERDG 375
L+ +F ++E+DG
Sbjct: 336 DRFSDNRDLDSVKQFWSEMEKDG 358
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/171 (18%), Positives = 66/171 (38%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
M++R D T + S G LK A +++ G L+ SY ++ +++
Sbjct: 144 MQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRF 203
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
+ R M + + Y +L+ G + + + + ++ G+ P+ +
Sbjct: 204 CTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTI 263
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALE 366
I AG+ +AY + M G P +++ A +L+ A E
Sbjct: 264 CIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKE 314
>sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630,
mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3
SV=1
Length = 627
Score = 68.9 bits (167), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 98/249 (39%), Gaps = 35/249 (14%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMA-------- 224
Y +IHG + +I+ AE + ++ +G + D VT +++ Y + G+ K A
Sbjct: 365 YNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMM 424
Query: 225 ---------------------------EETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLD 257
+E FE++ G D +++ + G +D
Sbjct: 425 TDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMD 484
Query: 258 RGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLI 317
R LL+EMD + Y L+RG G E A+ + ++ GI PD LI
Sbjct: 485 RAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLI 544
Query: 318 NAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFM 377
+ Y G ++ A+ M G P+ +L K + A E L +++ +G +
Sbjct: 545 SGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIV 604
Query: 378 VGKEASCTL 386
+ C++
Sbjct: 605 PNDSSFCSV 613
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/241 (19%), Positives = 94/241 (39%), Gaps = 35/241 (14%)
Query: 189 AENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVM 248
A L MK G + D V+ +++ S G+L+MA +E+ G +Y +++
Sbjct: 311 ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIH 370
Query: 249 AYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEG--------------- 293
++ E+L+RE+ + + + S Y L+ GY +G+++
Sbjct: 371 GLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQP 430
Query: 294 --------------------AQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAF 333
A +FE + G+ PD M L++ + G +A++
Sbjct: 431 TQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLL 490
Query: 334 QNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDGFMVGKEASCTLAAWFKRL 393
+ M + P D ++ E + A E + +++R G + TL + + +
Sbjct: 491 KEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKK 550
Query: 394 G 394
G
Sbjct: 551 G 551
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 89/228 (39%), Gaps = 39/228 (17%)
Query: 166 FEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAE 225
++N+ + +I+ K+ +++ A+ L M+ G VT +V +S G ++ A
Sbjct: 221 IKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGAR 280
Query: 226 ETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGY 285
E+K G D ++Y ++ G R +LREM + S Y L+RG
Sbjct: 281 LIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYNILIRGC 337
Query: 286 SMNGN-----------------------------------SEGAQRVFEAIQFAGITPDA 310
S NG+ E A+ + I+ GI D+
Sbjct: 338 SNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDS 397
Query: 311 RMCALLINAYQMAGQSQKAYTAFQNMRKAGLEPSD-KCVALILSACEK 357
+LIN Y G ++KA+ M G++P+ +LI C K
Sbjct: 398 VTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRK 445
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/210 (18%), Positives = 86/210 (40%), Gaps = 3/210 (1%)
Query: 196 MKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGM 255
MK +GF T ++ + S+ ++ A + ++ + + ++ M+ + G
Sbjct: 181 MKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGK 240
Query: 256 LDRGEVLLREMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITPDARMCAL 315
L + + L M+ + Y L++G+S+ G EGA+ + ++ G PD +
Sbjct: 241 LKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNP 300
Query: 316 LINAYQMAGQSQKAYTAFQNMRKAGLEPSDKCVALILSACEKENQLNRALEFLIDLERDG 375
+++ G +A + M++ GL P +++ C L A + ++ + G
Sbjct: 301 ILSWMCNEG---RASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQG 357
Query: 376 FMVGKEASCTLAAWFKRLGVVEEVEHVLRE 405
+ TL +E E ++RE
Sbjct: 358 MVPTFYTYNTLIHGLFMENKIEAAEILIRE 387
Score = 41.6 bits (96), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 83/207 (40%), Gaps = 4/207 (1%)
Query: 163 EESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLK 222
E+ F I+ + +I+NA M R + T +M+ + K G LK
Sbjct: 183 EKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLK 242
Query: 223 MAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALL 282
A+ +++ G +Y ++V + G ++ +++ EM ++ + Y +L
Sbjct: 243 KAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPIL 302
Query: 283 RGYSMNGNSEGAQRVFEAIQFAGITPDARMCALLINAYQMAGQSQKAYTAFQNMRKAGLE 342
S N A V ++ G+ PD+ +LI G + A+ M K G+
Sbjct: 303 ---SWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMV 359
Query: 343 PSDKCVALILSACEKENQLNRALEFLI 369
P+ ++ EN++ A E LI
Sbjct: 360 PTFYTYNTLIHGLFMENKI-EAAEILI 385
Score = 40.4 bits (93), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 1/114 (0%)
Query: 204 DQVTLTVMVVMYSKAGNLKMAEETFEEIKLLGEPLDKRSYGSMVMAYVRAGMLDRGEVLL 263
D VT ++ G + A E E+K G D SY +++ Y + G ++
Sbjct: 501 DDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVR 560
Query: 264 REMDAQEVYVGSEVYKALLRGYSMNGNSEGAQRVFEAIQFAGITP-DARMCALL 316
EM + Y ALL+G S N E A+ + ++ GI P D+ C+++
Sbjct: 561 DEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVI 614
Score = 36.6 bits (83), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 52/114 (45%)
Query: 173 YTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQVTLTVMVVMYSKAGNLKMAEETFEEIK 232
Y ++ G + + + A + MKRRG D ++ ++ YSK G+ K A +E+
Sbjct: 505 YNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEML 564
Query: 233 LLGEPLDKRSYGSMVMAYVRAGMLDRGEVLLREMDAQEVYVGSEVYKALLRGYS 286
LG +Y +++ + + E LLREM ++ + + +++ S
Sbjct: 565 SLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMS 618
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 148,472,319
Number of Sequences: 539616
Number of extensions: 5764561
Number of successful extensions: 17583
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 310
Number of HSP's successfully gapped in prelim test: 162
Number of HSP's that attempted gapping in prelim test: 14184
Number of HSP's gapped (non-prelim): 2255
length of query: 423
length of database: 191,569,459
effective HSP length: 120
effective length of query: 303
effective length of database: 126,815,539
effective search space: 38425108317
effective search space used: 38425108317
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)