BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014511
(423 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P53383|MRP_SYNY3 Protein mrp homolog OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=mrp PE=3 SV=1
Length = 353
Score = 220 bits (560), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 127/297 (42%), Positives = 184/297 (61%), Gaps = 12/297 (4%)
Query: 6 ALGEVSFRLELTTPACPIKDMFEQRANEVVLAIPWVNKVNVTMSAQPARPIFAEQLP--E 63
A G VSF L LTTPACP+++ + + V +P V KV V ++A+ + + LP +
Sbjct: 35 AGGTVSFTLVLTTPACPLREFIVEDCEKAVKTLPGVEKVEVKVTAETPQ---QKSLPDRQ 91
Query: 64 GLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRL 123
+ ++ NI+A+SS KGGVGKSTVAVN+A LA GA VG+ DAD+YGP+ PTM+
Sbjct: 92 SVGQVKNIIAISSGKGGVGKSTVAVNVAVALAQTGAAVGLLDADIYGPNAPTMLGLSGAA 151
Query: 124 LEM--NPEKRTIIPTEYLGVKLVSFGF--SGQGRAIMRGPMVSGVINQLLTTTEWGELDY 179
+++ +P+ + P G+K+VS GF I RGPM++G+I Q L WG LDY
Sbjct: 152 VQVQNSPQGEVLEPVFNHGIKMVSMGFLIDPDQPVIWRGPMLNGIIRQFLYQVNWGALDY 211
Query: 180 LVIDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVENM 239
L++DMPPGTGD QLTL Q VP+ AVIVTTPQ ++ +D +G++MF ++ V + +VENM
Sbjct: 212 LIVDMPPGTGDAQLTLTQSVPMAGAVIVTTPQTVSLLDARRGLKMFQQMGVNVLGIVENM 271
Query: 240 CHF---DADGKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGMPEVAADP 293
+F D ++Y FG G G + ++ +P L +P+ L GD G+P V + P
Sbjct: 272 SYFIPPDLPDRQYDLFGSGGGEKASKELNVPLLGCVPLEIGLREGGDKGVPIVVSQP 328
>sp|P45135|MRP_HAEIN Protein mrp homolog OS=Haemophilus influenzae (strain ATCC 51907 /
DSM 11121 / KW20 / Rd) GN=mrp PE=3 SV=2
Length = 370
Score = 208 bits (529), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 109/246 (44%), Positives = 151/246 (61%), Gaps = 5/246 (2%)
Query: 64 GLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRL 123
++ + NI+AVSS KGGVGKS+V+VNLA L GARVGI DAD+YGPS+P M+ ++
Sbjct: 102 AVKGVKNIIAVSSGKGGVGKSSVSVNLALALQAQGARVGILDADIYGPSIPHMLGAADQR 161
Query: 124 LEMNPEKRTIIPTEYLGVKLVSFGF--SGQGRAIMRGPMVSGVINQLLTTTEWGELDYLV 181
+P+ + I P + G+ S GF + I RGPM S ++QLL T W LDYLV
Sbjct: 162 -PTSPDNQHITPIKAHGLSANSIGFLMNEDSATIWRGPMASSALSQLLNETLWDSLDYLV 220
Query: 182 IDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVENMC- 240
IDMPPGTGDIQLTL Q +P+T AV+VTTPQ +A +D KG+ MF ++ VP + +VENM
Sbjct: 221 IDMPPGTGDIQLTLSQQIPVTGAVVVTTPQDIALLDAVKGISMFERVSVPVLGIVENMSM 280
Query: 241 HFDAD-GKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGMPEVAADPCGEVAN 299
H ++ G FG G ++ +++ + L LP+ + D+G P V P E++
Sbjct: 281 HICSECGHHEAIFGTGGAEKMAEKYNVKVLAQLPLHIRIREDLDAGNPTVVRVPENEISQ 340
Query: 300 TFQDLG 305
F L
Sbjct: 341 AFLQLA 346
>sp|P72190|YCAB_PSEFR Uncharacterized ATP-binding protein in capB 3'region OS=Pseudomonas
fragi PE=3 SV=1
Length = 287
Score = 205 bits (522), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 122/251 (48%), Positives = 155/251 (61%), Gaps = 5/251 (1%)
Query: 60 QLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSP 119
Q+P GL + NIVAV+S KGGVGKST A NLA LA GARVGI DAD+YGPS M
Sbjct: 31 QIP-GLANVKNIVAVASGKGGVGKSTTAANLALALAREGARVGILDADIYGPSQGVMFGI 89
Query: 120 ENRLLEMNPEKRTIIPTEYLGVKLVSFGFSGQGRAIM--RGPMVSGVINQLLTTTEWGEL 177
+++ +P E GV+++S F M RGPMVSG + QL+T T W +L
Sbjct: 90 AEGTRPKIRDQKWFVPIEAHGVEVMSMAFLTDDNTPMVWRGPMVSGALLQLVTQTAWNDL 149
Query: 178 DYLVIDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVE 237
DYLVIDMPPGTGDIQLTL Q VP+ +VIVTTPQ LA +D KGV MF K+ +P + VVE
Sbjct: 150 DYLVIDMPPGTGDIQLTLAQKVPVAGSVIVTTPQDLALLDARKGVEMFRKVNIPVLGVVE 209
Query: 238 NMC-HFDAD-GKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGMPEVAADPCG 295
NM H ++ G + FG G G ++ Q+G+ L LP+ + D+G P ADP
Sbjct: 210 NMAVHICSNCGHAEHLFGEGGGEKLATQYGVEVLASLPLAMEIREQADNGKPTAIADPNS 269
Query: 296 EVANTFQDLGV 306
+A +Q+L V
Sbjct: 270 PIALIYQELAV 280
>sp|Q54F15|NUBPL_DICDI Iron-sulfur protein NUBPL OS=Dictyostelium discoideum GN=nubpl PE=3
SV=1
Length = 323
Score = 204 bits (518), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 108/257 (42%), Positives = 150/257 (58%), Gaps = 4/257 (1%)
Query: 65 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLL 124
++ I NI+AVSS KGGVGKST AVN+A L+ VG+ D DV+GPS+P M+ +N
Sbjct: 53 IEGIKNIIAVSSAKGGVGKSTCAVNIALGLSSHNLSVGLLDVDVFGPSIPLMMDLKNHEK 112
Query: 125 EMNPEKRTIIPTEYLGVKLVSFGF--SGQGRAIMRGPMVSGVINQLLTTTEWGELDYLVI 182
E +IP + G+K +S GF + I RGPMV + +LL T+WG LD LV
Sbjct: 113 PFTNELNQMIPLQNYGIKCMSMGFLVNEDDPIIWRGPMVGSALEKLLRQTDWGHLDVLVC 172
Query: 183 DMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVENMCHF 242
D+PPGTGD LT+CQ VPLT AVIV+TPQ +A DV +GV MF K++VP + +VENM +F
Sbjct: 173 DLPPGTGDAILTMCQRVPLTGAVIVSTPQDVALADVVRGVNMFKKVEVPILGLVENMSYF 232
Query: 243 DAD--GKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGMPEVAADPCGEVANT 300
+ + + FG ++ GI L D+PI + + DSG P P A
Sbjct: 233 NCPHCNESTHIFGNEGAKNTAKKMGINFLGDVPIHLQIRETSDSGKPITVTQPDSPQAKN 292
Query: 301 FQDLGVCVVQQCAKIRQ 317
++D+ +++Q I
Sbjct: 293 YKDISKEIIKQLEIINN 309
>sp|P0AF08|MRP_ECOLI Protein mrp OS=Escherichia coli (strain K12) GN=mrp PE=3 SV=1
Length = 369
Score = 198 bits (504), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 111/252 (44%), Positives = 154/252 (61%), Gaps = 5/252 (1%)
Query: 64 GLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRL 123
G+ + NI+AVSS KGGVGKS+ AVNLA LA GA+VGI DAD+YGPS+PTM+ EN+
Sbjct: 102 GINGVKNIIAVSSGKGGVGKSSTAVNLALALAAEGAKVGILDADIYGPSIPTMLGAENQR 161
Query: 124 LEMNPEKRTIIPTEYLGVKLVSFGF--SGQGRAIMRGPMVSGVINQLLTTTEWGELDYLV 181
+P+ + P G+ S G+ + + RGPM S + Q+L T W +LDYLV
Sbjct: 162 -PTSPDGTHMAPIMSHGLATNSIGYLVTDDNAMVWRGPMASKALMQMLQETLWPDLDYLV 220
Query: 182 IDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVENMC- 240
+DMPPGTGDIQLTL Q +P+T AV+VTTPQ +A ID KG+ MF K++VP + +VENM
Sbjct: 221 LDMPPGTGDIQLTLAQNIPVTGAVVVTTPQDIALIDAKKGIVMFEKVEVPVLGIVENMSV 280
Query: 241 HFDADGKRYYP-FGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGMPEVAADPCGEVAN 299
H ++ + P FG G ++ +++ L +P+ +L D G P V + P E
Sbjct: 281 HICSNCGHHEPIFGTGGAEKLAEKYHTQLLGQMPLHISLREDLDKGTPTVISRPESEFTA 340
Query: 300 TFQDLGVCVVQQ 311
++ L V Q
Sbjct: 341 IYRQLADRVAAQ 352
>sp|P0AF09|MRP_ECOL6 Protein mrp OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928
/ UPEC) GN=mrp PE=3 SV=1
Length = 369
Score = 198 bits (504), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 111/252 (44%), Positives = 154/252 (61%), Gaps = 5/252 (1%)
Query: 64 GLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRL 123
G+ + NI+AVSS KGGVGKS+ AVNLA LA GA+VGI DAD+YGPS+PTM+ EN+
Sbjct: 102 GINGVKNIIAVSSGKGGVGKSSTAVNLALALAAEGAKVGILDADIYGPSIPTMLGAENQR 161
Query: 124 LEMNPEKRTIIPTEYLGVKLVSFGF--SGQGRAIMRGPMVSGVINQLLTTTEWGELDYLV 181
+P+ + P G+ S G+ + + RGPM S + Q+L T W +LDYLV
Sbjct: 162 -PTSPDGTHMAPIMSHGLATNSIGYLVTDDNAMVWRGPMASKALMQMLQETLWPDLDYLV 220
Query: 182 IDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVENMC- 240
+DMPPGTGDIQLTL Q +P+T AV+VTTPQ +A ID KG+ MF K++VP + +VENM
Sbjct: 221 LDMPPGTGDIQLTLAQNIPVTGAVVVTTPQDIALIDAKKGIVMFEKVEVPVLGIVENMSV 280
Query: 241 HFDADGKRYYP-FGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGMPEVAADPCGEVAN 299
H ++ + P FG G ++ +++ L +P+ +L D G P V + P E
Sbjct: 281 HICSNCGHHEPIFGTGGAEKLAEKYHTQLLGQMPLHISLREDLDKGTPTVISRPESEFTA 340
Query: 300 TFQDLGVCVVQQ 311
++ L V Q
Sbjct: 341 IYRQLADRVAAQ 352
>sp|Q9RVM9|MRP_DEIRA Protein mrp homolog OS=Deinococcus radiodurans (strain ATCC 13939 /
DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB
9279 / R1 / VKM B-1422) GN=mrp PE=3 SV=1
Length = 350
Score = 196 bits (498), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 132/320 (41%), Positives = 182/320 (56%), Gaps = 25/320 (7%)
Query: 5 EALGEVS-FRLELTTPACPIKDMFEQRANEVVLAIPWVNKVNVTMSA------QPARPIF 57
E G+V+ ++ LTTPACP+K E +L +P V V + A QPA P
Sbjct: 31 ELSGDVAQVKVNLTTPACPLKGQIELDVRSALLQVPGVRDVQIEFGAMVRAATQPALP-- 88
Query: 58 AEQLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMV 117
+ ++V V S KGGVGKS+VAVNLA +LA GARVG+ DADVYGPS+ M+
Sbjct: 89 ---------GVKHVVLVGSGKGGVGKSSVAVNLAASLARDGARVGLLDADVYGPSVAHML 139
Query: 118 SPENRLLEMNPEKRTIIPTEYLGVKLVSFG-FSGQGRAIM-RGPMVSGVINQLLTTTEWG 175
+ N E R + P E GV+ +S S G+A++ RGPM+ I Q L + WG
Sbjct: 140 GQGQARVTAN-EDRKMRPIEAHGVRFISMANLSPAGQALVWRGPMLHSAIQQFLKDSAWG 198
Query: 176 ELDYLVIDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAV 235
ELDYL++D+PPGTGD+QL+L Q V +T AVIVTTPQ +A ID A+ + MF K VP + V
Sbjct: 199 ELDYLIVDLPPGTGDVQLSLTQTVQVTGAVIVTTPQDVALIDAARAIDMFRKASVPVLGV 258
Query: 236 VENMCHFDA--DGKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGMPEVAADP 293
VENM +F A G Y FGRG ++ +Q+ P L ++P+ + D+G P + A P
Sbjct: 259 VENMSYFVAPDTGLTYDIFGRGGSRKLGEQY--PLLGEIPLDVEVRKDADAGAPAILAHP 316
Query: 294 CGEVANTFQDLGVCVVQQCA 313
A + + + Q +
Sbjct: 317 ESVAAQALRAVARTLAGQIS 336
>sp|O66946|MRP_AQUAE Protein mrp homolog OS=Aquifex aeolicus (strain VF5) GN=mrp PE=3
SV=1
Length = 364
Score = 196 bits (497), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 110/248 (44%), Positives = 159/248 (64%), Gaps = 6/248 (2%)
Query: 68 ISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMN 127
+ +I+AV S KGGVGKSTVA NLA L+ +G +VG+ DADVYGPS+PT+ + + ++
Sbjct: 111 VKHIIAVGSGKGGVGKSTVAANLAVALSQLGYKVGLLDADVYGPSVPTLFGLKGERVTVD 170
Query: 128 PEKRTIIPTEYLGVKLVSFGF---SGQGRAIMRGPMVSGVINQLLTTTEWGELDYLVIDM 184
+R IIP E G+K++S GF S I RGPM+ + + L +T+WG LD+LV+D+
Sbjct: 171 QFQR-IIPVEKYGLKILSIGFMLPSEDTPIIWRGPMLMKALTEFLFSTKWGNLDFLVMDL 229
Query: 185 PPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVENMCHF-- 242
PPGTGD+Q+TL Q V LT AV+VTTPQ +A DV K V MF ++ +P + V+ENM +F
Sbjct: 230 PPGTGDVQITLAQNVELTGAVVVTTPQDVALADVKKAVSMFREVNIPVLGVIENMAYFIC 289
Query: 243 DADGKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGMPEVAADPCGEVANTFQ 302
+D ++YY FG+G ++ +G+ L +PI P ++ D G P V + P EVA F
Sbjct: 290 PSDKQKYYIFGKGKVAEFANAYGLKILGSIPIDPEVAEKSDKGEPIVISHPDSEVAKAFL 349
Query: 303 DLGVCVVQ 310
+ + Q
Sbjct: 350 SIAKVLSQ 357
>sp|Q9ZMM5|MRP_HELPJ Protein mrp homolog OS=Helicobacter pylori (strain J99) GN=mrp PE=3
SV=1
Length = 368
Score = 195 bits (496), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 101/244 (41%), Positives = 149/244 (61%), Gaps = 4/244 (1%)
Query: 66 QKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLE 125
+ I ++V +SS KGGVGKST +VNL+ LA + +VG+ DADVYGP++P M+ +N +
Sbjct: 94 KNIKHVVMISSGKGGVGKSTTSVNLSIALANLNQKVGLLDADVYGPNIPRMMGLQNADVI 153
Query: 126 MNPEKRTIIPTEYLGVKLVSFGF-SGQGRAIM-RGPMVSGVINQLLTTTEWGELDYLVID 183
M+P + +IP + GV ++S G +G++++ RGPM+ I Q+L+ WG+LD LV+D
Sbjct: 154 MDPSGKKLIPLKAFGVSVMSMGLLYDEGQSLIWRGPMLMRAIEQMLSDIIWGDLDVLVVD 213
Query: 184 MPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVENMCHFD 243
MPPGTGD QLTL Q VPL+A + VTTPQ ++ D + + MF KL +P +VENM F
Sbjct: 214 MPPGTGDAQLTLAQAVPLSAGITVTTPQIVSLDDAKRSLDMFKKLHIPIAGIVENMGSFV 273
Query: 244 ADG--KRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGMPEVAADPCGEVANTF 301
+ K FG S S +++ + L LP+ P + GD G P V + P A F
Sbjct: 274 CEHCKKESEIFGSNSMSGLLEAYNTQILAKLPLEPKVRLGGDKGEPIVISHPTSVSAKIF 333
Query: 302 QDLG 305
+ +
Sbjct: 334 EKMA 337
>sp|O24999|MRP_HELPY Protein mrp homolog OS=Helicobacter pylori (strain ATCC 700392 /
26695) GN=mrp PE=3 SV=2
Length = 368
Score = 193 bits (491), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/244 (40%), Positives = 150/244 (61%), Gaps = 4/244 (1%)
Query: 66 QKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLE 125
+ I ++V +SS KGGVGKST +VNL+ LA + +VG+ DADVYGP++P M+ ++ +
Sbjct: 94 KNIKHVVMISSGKGGVGKSTTSVNLSIALANLNQKVGLLDADVYGPNIPRMMGLQSADVI 153
Query: 126 MNPEKRTIIPTEYLGVKLVSFGF-SGQGRAIM-RGPMVSGVINQLLTTTEWGELDYLVID 183
M+P + +IP + GV ++S G +G++++ RGPM+ I Q+L+ WG+LD LV+D
Sbjct: 154 MDPSGKKLIPLKAFGVSVMSMGLLYDEGQSLIWRGPMLMRAIEQMLSDIIWGDLDVLVVD 213
Query: 184 MPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVENMCHFD 243
MPPGTGD QLTL Q VPL+A + VTTPQ ++ D + + MF KL +P +VENM F
Sbjct: 214 MPPGTGDAQLTLAQAVPLSAGITVTTPQIVSLDDAKRSLDMFKKLHIPIAGIVENMGSFV 273
Query: 244 ADG--KRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGMPEVAADPCGEVANTF 301
+ K FG S S++++ + L LP+ P + GD G P V + P A F
Sbjct: 274 CEHCKKESEIFGSNSMSELLEAYHTQILAKLPLEPKVRLGGDRGEPIVISHPNSVSAKIF 333
Query: 302 QDLG 305
+ +
Sbjct: 334 EKMA 337
>sp|Q57731|Y283_METJA Uncharacterized ATP-binding protein MJ0283 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ0283 PE=3 SV=1
Length = 290
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/248 (40%), Positives = 144/248 (58%), Gaps = 10/248 (4%)
Query: 54 RPIFAEQ---LPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYG 110
+ + A+Q + E + KI + + + S KGGVGKSTV VNLA L MG +VG+ DAD++G
Sbjct: 21 KKLLAQQDAKIRENMSKIKHKIVILSGKGGVGKSTVTVNLAAALNLMGKKVGVLDADIHG 80
Query: 111 PSLPTMVSPENRLLEMNPEKRTIIPTEYLGVKLVSFGF---SGQGRAIMRGPMVSGVINQ 167
P++P M+ EN P I T+ G+K +S G+ + I RGP VSG I Q
Sbjct: 81 PNIPKMLGVENTQPMAGPAGIFPIVTKD-GIKTMSIGYLLPDDKTPVIWRGPKVSGAIRQ 139
Query: 168 LLTTTEWGELDYLVIDMPPGTGDIQLTLCQVVP-LTAAVIVTTPQKLAFIDVAKGVRMFS 226
L+ WGELDYL+ID PPGTGD QLT+ Q +P + A+IVTTP++++ +DV K + M
Sbjct: 140 FLSDVVWGELDYLLIDTPPGTGDEQLTIMQSIPDIDGAIIVTTPEEVSVLDVKKSIMMAK 199
Query: 227 KLKVPCIAVVENMCHFDAD--GKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDS 284
L +P I ++ENM F K FGRG G + ++ G+ L +P+ + D
Sbjct: 200 MLNIPIIGIIENMSGFVCPYCNKVVDIFGRGGGEKAAKELGVEFLGRIPLDIKAREASDK 259
Query: 285 GMPEVAAD 292
G+P V D
Sbjct: 260 GIPMVLLD 267
>sp|Q1RHB0|MRP_RICBR Protein mrp homolog OS=Rickettsia bellii (strain RML369-C) GN=mrp
PE=3 SV=1
Length = 318
Score = 171 bits (434), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 101/277 (36%), Positives = 156/277 (56%), Gaps = 38/277 (13%)
Query: 23 IKDMFEQRANEVVLAIPWVNKVNV------TMSAQPARPIFAEQLPEGLQKISNIVAVSS 76
IK+ ++ NE+V + K+ + T+ +P +P + E ++KI + V+S
Sbjct: 55 IKNTAIKKLNEIV----GIGKITIVFTESKTVEKKPQKP---KHFVENVKKI---ILVAS 104
Query: 77 CKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRT---- 132
KGGVGKST++ +A L+ RVGI DAD+YGPS+P + +N +T
Sbjct: 105 GKGGVGKSTISALIAQQLSLENHRVGIVDADIYGPSIP-------HIFGINEVPQTVGGR 157
Query: 133 IIPTEYLGVKLVSFGFSGQGRA--IMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGD 190
IIP ++++S GF + + I RGPM S I QLL+ T+W LDYL+IDMPPGTGD
Sbjct: 158 IIPVRAKNIEVISIGFFVKNYSAIIWRGPMASKTIYQLLSVTKWDNLDYLIIDMPPGTGD 217
Query: 191 IQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVENMCHFDADGKRYY 250
I L++ + L VIVTTPQK++ IDV + + ++ KL +P I ++ENM
Sbjct: 218 IHLSMLENYHLNGVVIVTTPQKMSEIDVVRSIDLYQKLNLPIIGIIENMSDL-------- 269
Query: 251 PFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGMP 287
F SGS + Q++ IP + +P+ P ++ + D +P
Sbjct: 270 -FDGNSGSHLSQKYNIPLIAQIPVIPKIANACDKSLP 305
>sp|Q4UKB5|MRP_RICFE Protein mrp homolog OS=Rickettsia felis (strain ATCC VR-1525 /
URRWXCal2) GN=mrp PE=3 SV=1
Length = 318
Score = 170 bits (431), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/282 (33%), Positives = 153/282 (54%), Gaps = 22/282 (7%)
Query: 8 GEVSFRLELTTPACPIKDMFEQRANEVVLAIPWVNKVNVTMSAQPARPIFAEQLPEGLQK 67
+ F ++++ + + +A + + I +NK+ + + A++ ++
Sbjct: 36 NNIGFSIDISGKNKLEAEELKAKAIDKLNEISEINKITIVFTESKPMEKKAQKPKHFVEN 95
Query: 68 ISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMN 127
+ I+ V+S KGGVGKST++ +A L+ RVGI DAD+YGPS+P + +N
Sbjct: 96 VKKIILVASGKGGVGKSTISALIAQQLSLENYRVGIVDADIYGPSIP-------HIFGIN 148
Query: 128 PEKRT----IIPTEYLGVKLVSFGF--SGQGRAIMRGPMVSGVINQLLTTTEWGELDYLV 181
+T IIP ++++S GF I RGPM S I QLL+ T+W LDYL+
Sbjct: 149 EVPKTKDGRIIPITVKSIQVISIGFFVKDHSAIIWRGPMASKTIYQLLSVTKWDNLDYLI 208
Query: 182 IDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVENMCH 241
IDMPPGTGDI L++ + L +IVTTPQK++ IDV + + ++ KL +P + ++ENM
Sbjct: 209 IDMPPGTGDIHLSMLENYHLDGVIIVTTPQKISEIDVIRSIDLYQKLNLPILGIIENMS- 267
Query: 242 FDADGKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGD 283
Y F SG + Q++ IP + +PI P ++ + D
Sbjct: 268 --------YMFESNSGGHLSQKYNIPLIAQIPIMPQIADACD 301
>sp|O58667|Y949_PYRHO Uncharacterized ATP-binding protein PH0949 OS=Pyrococcus horikoshii
(strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139
/ OT-3) GN=PH0949 PE=3 SV=1
Length = 295
Score = 167 bits (424), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/260 (40%), Positives = 150/260 (57%), Gaps = 18/260 (6%)
Query: 72 VAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKR 131
+AV S KGGVGKSTVAVNL LA MG VGI DAD++GP++ M+ + E+ EK
Sbjct: 33 IAVLSGKGGVGKSTVAVNLTAALAKMGYFVGILDADIHGPNVAKMLGVDKE--EVYAEKF 90
Query: 132 -----TIIP--TEYLG----VKLVSFGFS--GQGRAIMRGPMVSGVINQLLTTTEWGELD 178
+IP T+++G +K++S G I RGP+V+ I QLL +WG LD
Sbjct: 91 DDGHFEMIPPTTDFMGQVTPIKVMSMGMMVPEDQPVIWRGPLVTKAIKQLLGDVKWGSLD 150
Query: 179 YLVIDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVEN 238
+++ID PPGTGD LT+ Q + L AA+IVTTPQ++A +D K V M K++VP +AVVEN
Sbjct: 151 FMIIDFPPGTGDEILTVVQSIKLDAAIIVTTPQEVALLDTGKAVNMMKKMEVPYVAVVEN 210
Query: 239 MCHFDAD--GKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGMPEVAADPCGE 296
M + G + FG G G ++ Q+ G+ L +PI + D G+P V +
Sbjct: 211 MSYLICPHCGNKIDIFGEGGGEKLAQKEGVDFLGKIPIDLKAREASDLGIPIVLYEDT-P 269
Query: 297 VANTFQDLGVCVVQQCAKIR 316
A F +L +V + +I+
Sbjct: 270 AAKAFMELAEKLVNKLKEIK 289
>sp|Q92JA4|MRP_RICCN Protein mrp homolog OS=Rickettsia conorii (strain ATCC VR-613 /
Malish 7) GN=mrp PE=3 SV=1
Length = 319
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 153/294 (52%), Gaps = 29/294 (9%)
Query: 3 INEALGEVSFRLELTTPACPIKDMFEQRANEVVLAIPWVNKVNVTMSAQPARPIFAEQLP 62
+NE + ++ + + I + A E+ L +NK+N +F E P
Sbjct: 24 LNEVISDIIIKGNNIGFSIDISGKNKLEAEEIRLK--AINKLNEISEVNKITIVFTESKP 81
Query: 63 ---------EGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSL 113
++ + I+ V+S KGGVGKST++ +A L+ RVGI DAD+YGPS+
Sbjct: 82 MEKKVQKPKHFVENVKKIILVASGKGGVGKSTISALIAQQLSLANYRVGIVDADIYGPSI 141
Query: 114 PTMVSPENRLLEMNPEKR--TIIPTEYLGVKLVSFGF--SGQGRAIMRGPMVSGVINQLL 169
P + + P+ + IIP ++++S GF I RGPM S I QLL
Sbjct: 142 PHIFG-----INEVPQTKDGRIIPVLAQSIEIISIGFFVKDHSAIIWRGPMASKTIYQLL 196
Query: 170 TTTEWGELDYLVIDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLK 229
+ T+W LDYL+IDMPPGTGDI L++ + L +IVTTPQK++ IDV + + ++ KL
Sbjct: 197 SVTKWDNLDYLIIDMPPGTGDIHLSILENYHLDGVIIVTTPQKISEIDVIRSIDLYQKLN 256
Query: 230 VPCIAVVENMCHFDADGKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGD 283
+P + ++ENM Y SG + Q++ IP + +PI P ++ + D
Sbjct: 257 LPILGIIENMS---------YMLKNNSGGHLSQKYNIPLIAQMPITPQIAEACD 301
>sp|Q8TB37|NUBPL_HUMAN Iron-sulfur protein NUBPL OS=Homo sapiens GN=NUBPL PE=1 SV=3
Length = 319
Score = 166 bits (421), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/267 (37%), Positives = 155/267 (58%), Gaps = 16/267 (5%)
Query: 56 IFAEQLPEG--LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGAR--VGIFDADVYGP 111
I + LP+ ++ + ++ V+S KGGVGKST AVNLA LA + +G+ D DVYGP
Sbjct: 52 IMSRGLPKQKPIEGVKQVIVVASGKGGVGKSTTAVNLALALAANDSSKAIGLLDVDVYGP 111
Query: 112 SLPTMVSPENRLLEMNPE---KRTIIPTEYLGVKLVSFGFSGQGR--AIMRGPMVSGVIN 166
S+P M++ L+ NPE + P G+ +S GF + + RG MV I
Sbjct: 112 SVPKMMN-----LKGNPELSQSNLMRPLLNYGIACMSMGFLVEESEPVVWRGLMVMSAIE 166
Query: 167 QLLTTTEWGELDYLVIDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFS 226
+LL +WG+LDYLV+DMPPGTGD+QL++ Q +P+T AVIV+TPQ +A +D KG MF
Sbjct: 167 KLLRQVDWGQLDYLVVDMPPGTGDVQLSVSQNIPITGAVIVSTPQDIALMDAHKGAEMFR 226
Query: 227 KLKVPCIAVVENMCHFDADGKRY--YPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDS 284
++ VP + +V+NM F ++ + FG ++ Q G+ L D+P+ + + D+
Sbjct: 227 RVHVPVLGLVQNMSVFQCPKCKHKTHIFGADGARKLAQTLGLEVLGDIPLHLNIREASDT 286
Query: 285 GMPEVAADPCGEVANTFQDLGVCVVQQ 311
G P V + P + A + + V VV++
Sbjct: 287 GQPIVFSQPESDEAKAYLRIAVEVVRR 313
>sp|Q9CWD8|NUBPL_MOUSE Iron-sulfur protein NUBPL OS=Mus musculus GN=Nubpl PE=2 SV=2
Length = 319
Score = 163 bits (412), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/267 (37%), Positives = 153/267 (57%), Gaps = 16/267 (5%)
Query: 56 IFAEQLPEG--LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGAR--VGIFDADVYGP 111
I + LP+ ++ + ++ V+S KGGVGKST AVNLA LA + VG+ D DVYGP
Sbjct: 52 IMSRGLPKQKPIEGVREVIVVASGKGGVGKSTTAVNLALALAANDSSKAVGLLDVDVYGP 111
Query: 112 SLPTMVSPENRLLEMNPE---KRTIIPTEYLGVKLVSFGFSGQGRA--IMRGPMVSGVIN 166
S+P M++ L NPE + P G+ +S GF + A + RG MV I
Sbjct: 112 SIPKMMN-----LRGNPELSPNNLMRPLLNYGIACMSMGFLVEETAPLVWRGLMVMSAIE 166
Query: 167 QLLTTTEWGELDYLVIDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFS 226
+LL +WG+LDYLV+DMPPGTGD+QL++ Q +P++ AVIV+TPQ +A +D KG MF
Sbjct: 167 KLLRQVDWGQLDYLVVDMPPGTGDVQLSVSQNIPISGAVIVSTPQDIALMDAHKGAEMFR 226
Query: 227 KLKVPCIAVVENMCHFDADGKRY--YPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDS 284
K+ VP + +V+NM F ++ + FG ++ Q + L D+P+ ++ + D
Sbjct: 227 KVNVPVLGLVQNMSVFQCPKCKHKTHIFGADGARKLAQTLDLDVLGDVPLHLSIREASDM 286
Query: 285 GMPEVAADPCGEVANTFQDLGVCVVQQ 311
G P V + P + A + + VV++
Sbjct: 287 GQPVVFSQPGSDEAKAYLHIASEVVRR 313
>sp|P50863|SALA_BACSU Protein mrp homolog SalA OS=Bacillus subtilis (strain 168) GN=salA
PE=2 SV=1
Length = 352
Score = 163 bits (412), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 131/211 (62%), Gaps = 11/211 (5%)
Query: 71 IVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNP-- 128
+AV+S KGGVGKSTV+VNLA +LA +G +VG+ DAD+YG S+P M+ + + P
Sbjct: 108 FLAVASGKGGVGKSTVSVNLAISLARLGKKVGLIDADIYGFSVPDMMG-----ITVRPTI 162
Query: 129 EKRTIIPTEYLGVKLVSFGFSGQGRA--IMRGPMVSGVINQLLTTTEWGELDYLVIDMPP 186
E ++P E GVK++S GF + A + RGPM+ ++N EWGE+DY+V+D+PP
Sbjct: 163 EGEKLLPVERFGVKVMSMGFFVEENAPVVWRGPMLGKMLNNFFHEVEWGEVDYIVLDLPP 222
Query: 187 GTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVENMCHFDA-- 244
GTGD+ L + ++P +IV+TP A A+ M K + V+ENM ++++
Sbjct: 223 GTGDVALDVHTMLPSCKEIIVSTPHPTAAFVAARAGSMAIKTDHEVVGVIENMAYYESAK 282
Query: 245 DGKRYYPFGRGSGSQVVQQFGIPHLFDLPIR 275
G+R Y FG+G G ++ ++ +P L +P++
Sbjct: 283 TGEREYVFGKGGGDKLAEELNVPLLGRIPLK 313
>sp|Q6CE48|IND1_YARLI Iron-sulfur protein IND1 OS=Yarrowia lipolytica (strain CLIB 122 /
E 150) GN=IND1 PE=1 SV=1
Length = 312
Score = 162 bits (411), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 150/264 (56%), Gaps = 16/264 (6%)
Query: 30 RANEVVLAIPWVNKVNVTMSAQPARPIFAEQLPEGLQKISNIVAVSSCKGGVGKSTVAVN 89
R++E L IP + ++ P P + PE + + + VSS KGGVGKSTV+VN
Sbjct: 34 RSHENPLGIPK------SPASAPRIPRKTTRRPEPIAGVKKTIVVSSAKGGVGKSTVSVN 87
Query: 90 LAYTLAGMGARVGIFDADVYGPSLPTM--VSPENRLLEMNPEKRTIIPTEYLGVKLVSFG 147
A +LA G RVG+ D D++GPS+PTM +S E R+ + +IP G++++S G
Sbjct: 88 TALSLAKRGLRVGLLDVDIFGPSIPTMFGLSGEPRMTH----EGKLIPMSKFGIQVMSMG 143
Query: 148 F-SGQGRAIM-RGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQVVPLTAAV 205
F +A+ RG +V + QLL +WG LD LV+D+PPGTGD+QLT+ Q V + A+
Sbjct: 144 FLVDPNKAVAWRGLLVQKALEQLLQDVDWGTLDVLVMDLPPGTGDVQLTIAQTVKIDGAI 203
Query: 206 IVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVENMCHFDADGKRY--YPFGRGSGSQVVQQ 263
IV+TPQ +A +DV +G+ +F K + +V+NM F + + FG +
Sbjct: 204 IVSTPQDVALVDVVRGLDLFEKTYTKVLGLVQNMSVFVCPNCNHETHIFGVDGAVSKAKS 263
Query: 264 FGIPHLFDLPIRPTLSASGDSGMP 287
G+ L ++P+ P + + D G+P
Sbjct: 264 RGLGVLGNVPLDPQICSQSDKGVP 287
>sp|P53382|MRP_MYCLE Protein mrp homolog OS=Mycobacterium leprae (strain TN) GN=mrp PE=3
SV=2
Length = 383
Score = 162 bits (409), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 168/314 (53%), Gaps = 29/314 (9%)
Query: 8 GEVSFRLELTTPACPIKDMFEQRANEVVLAIPWVNKVNVTMS--AQPARPIFAEQLPEGL 65
G V + LT +CP K +R + + +P V V++ + R ++L
Sbjct: 46 GNVQVGIYLTIASCPKKSEISKRVTKAIADVPGTAAVEVSLDVMSDEQRTKLRKKLRGDA 105
Query: 66 QK----------ISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPT 115
++ ++ + V+S KGGVGKSTV VNLA +A G VG+ DAD++G S+P
Sbjct: 106 REPMIPFAQPNSLTRVYTVASGKGGVGKSTVTVNLATAIAARGLAVGVLDADIHGHSIPR 165
Query: 116 MVSPENRLLEMNPEKRTIIPTEYLGVKLVSFGFSGQGRA--IMRGPMVSGVINQLLTTTE 173
M+ R +++ + I+P VK++S G +G I RGPM+ + Q L+
Sbjct: 166 MMGSNQRPIQL---ESMILPPIVHEVKVISIGQFTEGNTPVIWRGPMLHRALQQFLSDVY 222
Query: 174 WGELDYLVIDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFS-KLKVPC 232
WG+LD L++D+PPGTGDI +++ Q++P ++VTTPQ LA +VA+ + + +
Sbjct: 223 WGDLDVLMLDLPPGTGDIAISVAQLIPNAEILVVTTPQ-LAAAEVAERAGSIALQTRQRI 281
Query: 233 IAVVENMCHFDA-DGKRYYPFGRGSGSQVVQQFG------IPHLFDLPIRPTLSASGDSG 285
+ VVENM DG R FG G G QV ++ +P L +P+ P L A+GDSG
Sbjct: 282 VGVVENMSGLMMPDGSRLQVFGEGGGQQVAERLSRAVGTDVPLLGQIPLDPALVAAGDSG 341
Query: 286 MPEV--AAD-PCGE 296
+P V A+D P G+
Sbjct: 342 IPIVLNASDSPVGK 355
>sp|Q9V0D9|Y851_PYRAB Uncharacterized ATP-binding protein PYRAB08510 OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=PYRAB08510 PE=3 SV=1
Length = 295
Score = 162 bits (409), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 100/233 (42%), Positives = 137/233 (58%), Gaps = 17/233 (7%)
Query: 72 VAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKR 131
VAV S KGGVGKSTVAVNL LA MG VGI DAD++GP++ M+ E E+ EK
Sbjct: 33 VAVLSGKGGVGKSTVAVNLTAALAKMGYFVGILDADIHGPNVAKMLGVEKE--EIYAEKF 90
Query: 132 -----TIIP--TEYLG----VKLVSFGFS--GQGRAIMRGPMVSGVINQLLTTTEWGELD 178
+IP +++G +K++S G I RG +V+ I QLL +WG LD
Sbjct: 91 DDGHFEMIPPMADFMGQVTPIKVMSMGMMVPEDQPIIWRGALVTKAIKQLLGDVKWGSLD 150
Query: 179 YLVIDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVEN 238
+++ID PPGTGD LT+ Q + L AA+IVTTPQ++A +D K V M K++VP IAVVEN
Sbjct: 151 FMIIDFPPGTGDEILTVVQSIQLDAAIIVTTPQEVALLDTGKAVNMMKKMEVPYIAVVEN 210
Query: 239 MCHFDAD--GKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGMPEV 289
M + G + FG G G ++ ++ G+ L +PI + D G+P V
Sbjct: 211 MSYLICPHCGNKIDIFGEGGGEKLAEKEGVDFLGKIPIDLKAREASDLGIPIV 263
>sp|P53381|MRP_CLOPE Protein mrp homolog OS=Clostridium perfringens (strain 13 / Type A)
GN=mrp PE=3 SV=2
Length = 284
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/247 (39%), Positives = 142/247 (57%), Gaps = 14/247 (5%)
Query: 60 QLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSP 119
+L I N++ V S KGGVGKSTV LA LA G +VG+ DAD+ GPS+P
Sbjct: 29 KLGTNYGNIKNVIGVISGKGGVGKSTVTGILATQLAKKGYKVGVLDADITGPSMPRFFGI 88
Query: 120 ENR---LLEMNPEKRTI----IPTEYLGVKLVSFGFSGQGR---AIMRGPMVSGVINQLL 169
+ ++ M+ E + + + TE LG+K++S + I RGPMV+GV+NQ+
Sbjct: 89 NEKRADIVAMDSEGKQVKFVPVKTE-LGIKVISMNLLMEVEDDPVIWRGPMVTGVLNQMF 147
Query: 170 TTTEWGELDYLVIDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLK 229
T+W ELDYL+IDMPPGT DI LT+ Q P+ VIV+TPQ + + V K V M K+
Sbjct: 148 KDTDWEELDYLLIDMPPGTSDITLTVMQTFPIKELVIVSTPQDMVSMIVKKLVTMAHKMN 207
Query: 230 VPCIAVVENMCHFDAD-GKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGMPE 288
V VVENM + + + GK+ F + S + + G+P + +LPI L+ + ++G E
Sbjct: 208 VCVRGVVENMAYIECECGKKMRVFSKKSSEEHAEYLGLPLIGELPINLDLTEALENGKAE 267
Query: 289 --VAADP 293
VA +P
Sbjct: 268 EYVAENP 274
>sp|Q8U1R0|Y1145_PYRFU Uncharacterized ATP-binding protein PF1145 OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
GN=PF1145 PE=3 SV=1
Length = 295
Score = 158 bits (400), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 146/260 (56%), Gaps = 18/260 (6%)
Query: 72 VAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEK- 130
+AV S KGGVGKSTVAVNL LA MG VGI DAD++GP++ M N ++ EK
Sbjct: 33 IAVLSGKGGVGKSTVAVNLTAALAKMGYFVGILDADIHGPNVAKMFGIGNT--DIYAEKF 90
Query: 131 -----RTIIPT-EYLG----VKLVSFGFS--GQGRAIMRGPMVSGVINQLLTTTEWGELD 178
I PT +++G +K++S G I RG +V+ I QLL WGELD
Sbjct: 91 EDGHFEMIPPTVDFMGQVTPIKVMSMGMMVPEDQPIIWRGSLVTKAIKQLLGDVMWGELD 150
Query: 179 YLVIDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVEN 238
+++ID PPGTGD LT+ Q + L AA++VTTPQ++A +D K V M K++VP IAV+EN
Sbjct: 151 FMIIDFPPGTGDEILTVVQSIQLDAAIVVTTPQEVALLDTGKAVNMMKKMEVPYIAVIEN 210
Query: 239 MCHFDAD--GKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGMPEVAADPCGE 296
M + G + FG G G ++ ++ G+ L +PI + D G+P V
Sbjct: 211 MSYLICPHCGNKIDIFGEGGGEKLAEKEGVDFLGKVPIDLKAREASDLGIPIVLYGDT-P 269
Query: 297 VANTFQDLGVCVVQQCAKIR 316
A F ++ +V + +I+
Sbjct: 270 AAKAFMEIAEKLVNKLKEIK 289
>sp|Q68XP6|MRP_RICTY Protein mrp homolog OS=Rickettsia typhi (strain ATCC VR-144 /
Wilmington) GN=mrp PE=3 SV=1
Length = 318
Score = 156 bits (394), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/249 (34%), Positives = 137/249 (55%), Gaps = 22/249 (8%)
Query: 41 VNKVNVTMSAQPARPIFAEQLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGAR 100
VN + + + + A++ ++ + I+ V+S KGGVGKST++ +A L+ +
Sbjct: 69 VNNITIVFTQKKTIDKKAQKPKHFVENVKKIILVASGKGGVGKSTISALIAQQLSLENYQ 128
Query: 101 VGIFDADVYGPSLPTMVSPENRLLEMNPEKRT----IIPTEYLGVKLVSFGF--SGQGRA 154
VGI DAD+YGPS+P + +N +T IIP ++++S GF
Sbjct: 129 VGIVDADIYGPSIP-------HIFGINEIPKTVEGRIIPILAQNIQIISIGFFVKAHSAI 181
Query: 155 IMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLA 214
I RGPM S +I QLL+ T W LDYL+IDMPPGTGDI L++ + L ++VTTPQK++
Sbjct: 182 IYRGPMASKIIYQLLSNTRWNNLDYLIIDMPPGTGDIHLSMLENYHLDGVIVVTTPQKIS 241
Query: 215 FIDVAKGVRMFSKLKVPCIAVVENMCHFDADGKRYYPFGRGSGSQVVQQFGIPHLFDLPI 274
IDV + + ++ KL +P + ++ENM Y + +++ IP + +PI
Sbjct: 242 EIDVIRSIDLYRKLGLPILGIIENMI---------YMLESDRCGHLSKKYNIPLIAKIPI 292
Query: 275 RPTLSASGD 283
P ++ + D
Sbjct: 293 IPQIANACD 301
>sp|Q9ZE27|MRP_RICPR Protein mrp homolog OS=Rickettsia prowazekii (strain Madrid E)
GN=mrp PE=3 SV=1
Length = 318
Score = 155 bits (392), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 87/249 (34%), Positives = 139/249 (55%), Gaps = 16/249 (6%)
Query: 38 IPWVNKVNVTMSAQPARPIFAEQLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGM 97
I VNK+ + + A++ ++ + I+ V+S KGGVGKST++ +A L+
Sbjct: 66 IKEVNKITIVFTQSKTIDKKAQKPKHFVENVKKIILVASGKGGVGKSTISALIAQQLSLE 125
Query: 98 GARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRTIIPTEYLGVKLVSFGF--SGQGRAI 155
RVGI DAD+YGPS+P + + E R I+P ++++S GF I
Sbjct: 126 NYRVGIVDADIYGPSIPHIFGING--IPKTVEGR-IVPILAQNIQIISIGFFVKAHSAII 182
Query: 156 MRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAF 215
RGPM S +I QLL+ T W LDYL+IDMPPGTGDI L++ + L ++VTT QK++
Sbjct: 183 YRGPMASKIIYQLLSNTRWNNLDYLIIDMPPGTGDIHLSIIENYHLDGVIVVTTQQKISE 242
Query: 216 IDVAKGVRMFSKLKVPCIAVVENMCH-FDADGKRYYPFGRGSGSQVVQQFGIPHLFDLPI 274
IDV + + ++ KL +P + ++ENM + ++D Y +++ IP + +PI
Sbjct: 243 IDVIRSIDLYRKLGLPILGIIENMIYMLESDHCGYLS----------KKYHIPLIAQIPI 292
Query: 275 RPTLSASGD 283
P ++ + D
Sbjct: 293 MPQIANACD 301
>sp|Q6CQV4|CFD1_KLULA Cytosolic Fe-S cluster assembly factor CFD1 OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=CFD1 PE=3 SV=1
Length = 283
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/230 (38%), Positives = 128/230 (55%), Gaps = 13/230 (5%)
Query: 61 LPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPE 120
+PE L+ I +I+ V S KGGVGKS+V A TL G +VG+ D D+ GPSLP M E
Sbjct: 10 MPESLKDIKHIILVLSGKGGVGKSSVTTQTALTLCLKGYKVGVLDIDLTGPSLPRMFGLE 69
Query: 121 NRLLEMNPEKRTI---IPTEYLG-VKLVSFGFSGQGRA---IMRGPMVSGVINQLLTTTE 173
N+ + K I +PT G +KL+S GF R + RGP S +I Q + +
Sbjct: 70 NKQV-YQASKGWIPVSVPTTSGGELKLMSLGFLLDDRGNSVVWRGPKKSAMIKQFIKDVD 128
Query: 174 WGELDYLVIDMPPGTGDIQLTLCQVVPLTA---AVIVTTPQKLAFIDVAKGVRMFSKLKV 230
WG+LDYL+ID PPGT D +++ + + A A+IVTTPQ +A DV K + K+
Sbjct: 129 WGDLDYLIIDTPPGTSDEHISIAEELRWAAPDGAIIVTTPQGVATADVRKEINFCKKVNF 188
Query: 231 PCIAVVENMCHFDAD--GKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTL 278
+ V+ENM F + F RG G ++ ++ +P+L ++PI PT
Sbjct: 189 NILGVIENMSGFICPHCAECTDIFSRGGGFKLASEYNVPYLGNIPIDPTF 238
>sp|A7SE07|NUBP2_NEMVE Cytosolic Fe-S cluster assembly factor NUBP2 homolog
OS=Nematostella vectensis GN=v1g229988 PE=3 SV=1
Length = 270
Score = 142 bits (359), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 132/234 (56%), Gaps = 9/234 (3%)
Query: 61 LPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPE 120
+P+GL+ + +I+ V S KGGVGKSTVA L++ L G +VG+ D D+ GPS+P M++ E
Sbjct: 5 VPQGLRSVKHIILVLSGKGGVGKSTVATQLSWALYNQGNKVGLLDIDLCGPSIPRMMNVE 64
Query: 121 NRLLEMNPEKRTII---PTEYLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWGE 176
N + + + P + LGV + F + A++ RGP + +I Q L+ WG+
Sbjct: 65 NNDVHQCSDGWVPVYTGPDQRLGVMSIGFLLHSKEDAVVWRGPKKNAMIKQFLSDVCWGD 124
Query: 177 LDYLVIDMPPGTGDIQLTLCQVVPLT---AAVIVTTPQKLAFIDVAKGVRMFSKLKVPCI 233
+DYL+ID PPGT D +T+ + + A++VTTPQ +A DV + + K K+P +
Sbjct: 125 IDYLIIDTPPGTSDEHITVVENLKTCHPDGAILVTTPQGVAISDVRREITFCKKTKIPVL 184
Query: 234 AVVENMCHFDAD--GKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSG 285
+VENM F + F +G G + ++ +P L +P+ P L+ + + G
Sbjct: 185 GIVENMSGFVCPHCSECTNVFSKGGGEALAKECEVPFLGCIPLDPNLTMNIEDG 238
>sp|P65441|MRP_MYCTU Protein mrp homolog OS=Mycobacterium tuberculosis GN=mrp PE=3 SV=1
Length = 381
Score = 142 bits (358), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 162/319 (50%), Gaps = 26/319 (8%)
Query: 8 GEVSFRLELTTPACPIKDMFEQRANEVVLAIPWVNKVNVTMS--AQPARPIFAEQLPEGL 65
G V + LT CP K +R V +P + V V++ + R +QL
Sbjct: 44 GSVHVEIYLTIAGCPKKSEITERVTRAVADVPGTSAVRVSLDVMSDEQRTELRKQLRGDT 103
Query: 66 QK----------ISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPT 115
++ ++ + AV+S KGGVGKSTV VNLA +A G +G+ DAD++G S+P
Sbjct: 104 REPVIPFAQPDSLTRVYAVASGKGGVGKSTVTVNLAAAMAVRGLSIGVLDADIHGHSIPR 163
Query: 116 MVSPENRLLEMNPEKRTIIPTEYLGVKLVSFGFSGQGRA--IMRGPMVSGVINQLLTTTE 173
M+ +R ++ + I+P VK++S QG + RGPM+ + Q L
Sbjct: 164 MMGTTDRPTQV---ESMILPPIAHQVKVISIAQFTQGNTPVVWRGPMLHRALQQFLADVY 220
Query: 174 WGELDYLVIDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFS-KLKVPC 232
WG+LD L++D+PPGTGD+ +++ Q++P ++VTTPQ LA +VA+ + + +
Sbjct: 221 WGDLDVLLLDLPPGTGDVAISVAQLIPNAELLVVTTPQ-LAAAEVAERAGSIALQTRQRI 279
Query: 233 IAVVENMCHFDA-DGKRYYPFGRGSGSQVVQQFG------IPHLFDLPIRPTLSASGDSG 285
+ VVENM DG FG G G V ++ +P L +P+ P L A+GDSG
Sbjct: 280 VGVVENMSGLTLPDGTTMQVFGEGGGRLVAERLSRAVGADVPLLGQIPLDPALVAAGDSG 339
Query: 286 MPEVAADPCGEVANTFQDL 304
+P V + P + +
Sbjct: 340 VPLVLSSPDSAIGKELHSI 358
>sp|P65442|MRP_MYCBO Protein mrp homolog OS=Mycobacterium bovis (strain ATCC BAA-935 /
AF2122/97) GN=mrp PE=3 SV=1
Length = 381
Score = 142 bits (358), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 162/319 (50%), Gaps = 26/319 (8%)
Query: 8 GEVSFRLELTTPACPIKDMFEQRANEVVLAIPWVNKVNVTMS--AQPARPIFAEQLPEGL 65
G V + LT CP K +R V +P + V V++ + R +QL
Sbjct: 44 GSVHVEIYLTIAGCPKKSEITERVTRAVADVPGTSAVRVSLDVMSDEQRTELRKQLRGDT 103
Query: 66 QK----------ISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPT 115
++ ++ + AV+S KGGVGKSTV VNLA +A G +G+ DAD++G S+P
Sbjct: 104 REPVIPFAQPDSLTRVYAVASGKGGVGKSTVTVNLAAAMAVRGLSIGVLDADIHGHSIPR 163
Query: 116 MVSPENRLLEMNPEKRTIIPTEYLGVKLVSFGFSGQGRA--IMRGPMVSGVINQLLTTTE 173
M+ +R ++ + I+P VK++S QG + RGPM+ + Q L
Sbjct: 164 MMGTTDRPTQV---ESMILPPIAHQVKVISIAQFTQGNTPVVWRGPMLHRALQQFLADVY 220
Query: 174 WGELDYLVIDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFS-KLKVPC 232
WG+LD L++D+PPGTGD+ +++ Q++P ++VTTPQ LA +VA+ + + +
Sbjct: 221 WGDLDVLLLDLPPGTGDVAISVAQLIPNAELLVVTTPQ-LAAAEVAERAGSIALQTRQRI 279
Query: 233 IAVVENMCHFDA-DGKRYYPFGRGSGSQVVQQFG------IPHLFDLPIRPTLSASGDSG 285
+ VVENM DG FG G G V ++ +P L +P+ P L A+GDSG
Sbjct: 280 VGVVENMSGLTLPDGTTMQVFGEGGGRLVAERLSRAVGADVPLLGQIPLDPALVAAGDSG 339
Query: 286 MPEVAADPCGEVANTFQDL 304
+P V + P + +
Sbjct: 340 VPLVLSSPDSAIGKELHSI 358
>sp|P40558|CFD1_YEAST Cytosolic Fe-S cluster assembly factor CFD1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=CFD1 PE=1
SV=1
Length = 293
Score = 141 bits (356), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 90/276 (32%), Positives = 142/276 (51%), Gaps = 18/276 (6%)
Query: 65 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLL 124
L I +I+ + S KGGVGKS+V A TL MG +VG+ D D+ GPSLP M EN +
Sbjct: 13 LAGIKHIILILSGKGGVGKSSVTTQTALTLCSMGFKVGVLDIDLTGPSLPRMFGLENESI 72
Query: 125 EMNPE--KRTIIPTEYLG-VKLVSFGFSGQGRA---IMRGPMVSGVINQLLTTTEWGELD 178
PE + + T G + ++S GF R I RGP + +I Q ++ WGELD
Sbjct: 73 YQGPEGWQPVKVETNSTGSLSVISLGFLLGDRGNSVIWRGPKKTSMIKQFISDVAWGELD 132
Query: 179 YLVIDMPPGTGDIQLTLCQVVPLT---AAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAV 235
YL+ID PPGT D +++ + + + ++VTTPQ +A DV K + K+ + + +
Sbjct: 133 YLLIDTPPGTSDEHISIAEELRYSKPDGGIVVTTPQSVATADVKKEINFCKKVDLKILGI 192
Query: 236 VENMCHFDAD--GKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGMPEVAADP 293
+ENM F + F G G ++ +QF +P+L ++PI P M E
Sbjct: 193 IENMSGFVCPHCAECTNIFSSGGGKRLSEQFSVPYLGNVPIDPKFVE-----MIENQVSS 247
Query: 294 CGEVANTFQDLGVCVV--QQCAKIRQQVSTAVIYDK 327
+ +++ +C + + K+R+Q +T + DK
Sbjct: 248 KKTLVEMYRESSLCPIFEEIMKKLRKQDTTTPVVDK 283
>sp|Q6FPP7|CFD1_CANGA Cytosolic Fe-S cluster assembly factor CFD1 OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=CFD1 PE=3 SV=1
Length = 285
Score = 141 bits (356), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 123/225 (54%), Gaps = 15/225 (6%)
Query: 65 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLL 124
L I +I+ V S KGGVGKS+V A TL GMG VG+ D D+ GPSLP M E+ +
Sbjct: 18 LSLIKHILLVLSGKGGVGKSSVTTQTALTLCGMGYNVGVLDIDLTGPSLPRMFGIEDSSI 77
Query: 125 EMNPEKRTIIPTEYLG---VKLVSFGFSGQGRA---IMRGPMVSGVINQLLTTTEWGELD 178
+ + IP E G + +VS GF R + RGP + +I Q + WGELD
Sbjct: 78 YQSADGWMPIPVETNGKGKLCVVSLGFLLGSRGTSVVWRGPKKTSMIRQFIKDVTWGELD 137
Query: 179 YLVIDMPPGTGDIQLTLCQVVPLT---AAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAV 235
YL+ID PPGT D +++ + + T A++VTTPQ +A DV K + K+ + + V
Sbjct: 138 YLLIDTPPGTSDEHISIAEELRFTNPDGAIVVTTPQGVATADVKKEINFCRKVNLRILGV 197
Query: 236 VENM----CHFDADGKRYYPFGRGSGSQVVQQFGIPHLFDLPIRP 276
+ENM C + + F +G G + +QF +P+L ++PI P
Sbjct: 198 IENMSGFVCPYCTECTNI--FSKGGGESLAKQFDVPYLGNIPIDP 240
>sp|Q7QGS3|NUBP2_ANOGA Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Anopheles
gambiae GN=AGAP010873 PE=3 SV=4
Length = 259
Score = 138 bits (348), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 89/249 (35%), Positives = 128/249 (51%), Gaps = 9/249 (3%)
Query: 65 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLL 124
L K+ +I+ V S KGGVGKSTV+ LA TLA +VG+ D D+ GPS+P ++ E+R +
Sbjct: 2 LDKVKHIILVLSGKGGVGKSTVSTQLALTLAEADHKVGLLDIDLCGPSVPYLLGLEDRDV 61
Query: 125 EMNPEKRT-IIPTEYLGVKLVSFGFSGQGRA---IMRGPMVSGVINQLLTTTEWGELDYL 180
E + + + ++S GF + R+ I RGP + +I Q L W ELDYL
Sbjct: 62 HQCDEGWVPVYTSAEKRLAVMSIGFLLKNRSDAVIWRGPKKTAMIKQFLEDVNWDELDYL 121
Query: 181 VIDMPPGTGDIQLTL---CQVVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVE 237
+ID PPGT D +T+ + V A+IVTTPQ++A DV K V K +P + +VE
Sbjct: 122 IIDTPPGTSDEHITVMECLKTVRTEGAIIVTTPQEMALEDVRKEVTFCKKTGIPILGIVE 181
Query: 238 NMCHFDADGKRYYP--FGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGMPEVAADPCG 295
NM F F G G + + +PHL LPI P + +G V P
Sbjct: 182 NMSGFVCPNCSECTNIFSSGGGHSLAELAKVPHLGTLPIDPRVGELAGTGKACVKELPDC 241
Query: 296 EVANTFQDL 304
+ ++L
Sbjct: 242 TTSEVLREL 250
>sp|Q93459|NUBP1_CAEEL Cytosolic Fe-S cluster assembly factor NUBP1 homolog
OS=Caenorhabditis elegans GN=F10G8.6 PE=3 SV=2
Length = 313
Score = 138 bits (347), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 135/251 (53%), Gaps = 11/251 (4%)
Query: 65 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGAR-VGIFDADVYGPSLPTMVSPENRL 123
+I + + + S KGGVGKST+ NLA LA ++ V I D D+ GPS P M+ E+
Sbjct: 54 FSRIKHKILILSGKGGVGKSTLTSNLARALASDPSKQVAILDVDICGPSQPRMMGVEDEE 113
Query: 124 LEMNPEKRTIIPTE-YLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWGELDYLV 181
+ + + T + + L + ++F + A++ RG +G+I Q L +WGE+DYL+
Sbjct: 114 VHNSADGWTPVGIQPNLTLMSIAFLLGDKNDAVIWRGARKNGMIKQFLKDVDWGEVDYLL 173
Query: 182 IDMPPGTGDIQLTLCQVV----PLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVE 237
ID PPGT D ++L Q + PL A+IV+TPQ+++ +DV K V K KVP + VVE
Sbjct: 174 IDTPPGTSDEHISLVQFLLQAGPLDGALIVSTPQEVSLLDVRKEVSFCVKTKVPILGVVE 233
Query: 238 NMCHF----DADGKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGMPEVAADP 293
NM F A +P G Q+ + + L LP+ P L+ + D+G +P
Sbjct: 234 NMARFVCPNCAHTTLLFPTSTGGAEQMCKDSNLELLAQLPLEPALAKALDNGEDFFETNP 293
Query: 294 CGEVANTFQDL 304
+A +F DL
Sbjct: 294 DSTLAKSFLDL 304
>sp|A8WWQ7|NUBP1_CAEBR Cytosolic Fe-S cluster assembly factor NUBP1 homolog
OS=Caenorhabditis briggsae GN=CBG03788 PE=3 SV=1
Length = 313
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 135/251 (53%), Gaps = 11/251 (4%)
Query: 65 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGAR-VGIFDADVYGPSLPTMVSPENRL 123
+I + + + S KGGVGKST+ NLA LA ++ V I D D+ GPS P M+ E+
Sbjct: 54 FSRIKHKILILSGKGGVGKSTLTSNLARALASDPSKQVAILDVDICGPSQPRMMGVEDEE 113
Query: 124 LEMNPEKRTIIPTE-YLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWGELDYLV 181
+ + + T + + L + ++F + A++ RG +G+I Q L +WGE+DYL+
Sbjct: 114 VHNSADGWTPVGIQPNLTLMSIAFLIGDKNDAVIWRGARKNGMIKQFLKDVDWGEVDYLL 173
Query: 182 IDMPPGTGDIQLTLCQVV----PLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVE 237
ID PPGT D ++L Q + PL A+IV+TPQ+++ +DV K V K KVP + VVE
Sbjct: 174 IDTPPGTSDEHISLVQFLLQAGPLDGALIVSTPQEVSLLDVRKEVSFCIKTKVPILGVVE 233
Query: 238 NMCHF----DADGKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGMPEVAADP 293
NM F A +P G ++ + + L LP+ P L+ + D+G +P
Sbjct: 234 NMARFVCPNCAHTTLLFPTSTGGAEKMCEDSNLELLAQLPLEPALAEALDNGEDFFETNP 293
Query: 294 CGEVANTFQDL 304
+A +F DL
Sbjct: 294 DSTLAKSFMDL 304
>sp|Q75AC3|CFD1_ASHGO Cytosolic Fe-S cluster assembly factor CFD1 OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=CFD1 PE=3 SV=2
Length = 281
Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 122/231 (52%), Gaps = 16/231 (6%)
Query: 62 PEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPEN 121
PE L++I +IV V S KGGVGKS+V L LA G +VGI D D+ GPSLP MV E
Sbjct: 9 PESLREIEHIVLVLSGKGGVGKSSVTTQLGMALACRGLKVGILDIDLTGPSLPRMVGMEG 68
Query: 122 RLLEMNPEKRTIIPT------EYLGVKLVSFGFSGQGRA---IMRGPMVSGVINQLLTTT 172
+ + P R IP E ++++S GF R + RGP + +I Q ++
Sbjct: 69 KSVLQGP--RGWIPVDVPTGMEQGCLRVMSLGFLLDDRGDSVVWRGPKKTAMIKQFISDV 126
Query: 173 EWGELDYLVIDMPPGTGDIQLTLCQVVPLT---AAVIVTTPQKLAFIDVAKGVRMFSKLK 229
WG LDYL+ID PPGT D +++ + + A+IV+TPQK+A DV K + K+
Sbjct: 127 YWGALDYLLIDTPPGTSDEHISIAEELRGARPDGAIIVSTPQKVAVADVKKEINFCRKVN 186
Query: 230 VPCIAVVENMCHFDAD--GKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTL 278
+ VVENM F + F RG G + + G+P L +PI P
Sbjct: 187 FKLLGVVENMSGFVCPHCSECTNIFARGGGESLALESGVPFLGTVPIDPAF 237
>sp|Q8T2F3|NUBP1_DICDI Cytosolic Fe-S cluster assembly factor NUBP1 homolog
OS=Dictyostelium discoideum GN=nubp1 PE=3 SV=1
Length = 315
Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 133/254 (52%), Gaps = 12/254 (4%)
Query: 60 QLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLA-GMGARVGIFDADVYGPSLPTMVS 118
++ E ++ + N + V S KGGVGKST + L++ L+ VG+ D D+ GPS+P ++
Sbjct: 49 EIEERMKTVKNKILVLSGKGGVGKSTFSSQLSFALSMDEKVEVGLLDIDICGPSIPKIMG 108
Query: 119 PENRLLEMNPEKRT-IIPTEYLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWGE 176
E + ++ + + + L V V F + A++ RGP +G+I Q L W +
Sbjct: 109 LEGENIHISGQGWDPVYVQDNLAVMSVGFLLEKEEDAVIWRGPKKNGIIKQFLKDVYWND 168
Query: 177 LDYLVIDMPPGTGDIQLTLCQVVP---LTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCI 233
LDYLVID PPGT D L++ Q + L+ AVIVT+PQ +A IDV K + K+ VP I
Sbjct: 169 LDYLVIDTPPGTSDEHLSIVQYLKTSNLSGAVIVTSPQDVALIDVRKEINFCKKVGVPII 228
Query: 234 AVVENMCHF-----DADGKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGMPE 288
VVENM F + + + + P G ++ Q +P L +PI P ++ S D G
Sbjct: 229 GVVENMSGFVCPKCNKESQIFIPT-TGGAEKMSQDMNVPFLGRIPIDPLIARSCDEGKSY 287
Query: 289 VAADPCGEVANTFQ 302
+ P E +
Sbjct: 288 LITHPNSEATKQYN 301
>sp|B4IYG8|NUBP2_DROGR Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Drosophila
grimshawi GN=GH14587 PE=3 SV=1
Length = 264
Score = 136 bits (342), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/237 (36%), Positives = 126/237 (53%), Gaps = 12/237 (5%)
Query: 65 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENR-L 123
L K+ N++ V S KGGVGKSTV+ LA L G +VG+ D D+ GPS+P ++ E R +
Sbjct: 2 LDKVKNVIVVLSGKGGVGKSTVSTQLALALRATGHKVGLLDIDLCGPSVPYLLGLEGRDI 61
Query: 124 LEMNPEKRTIIPTEYLGVKLVSFGFSGQGRA---IMRGPMVSGVINQLLTTTEWGELDYL 180
+ + I E + ++S GF + R I RGP + +I Q L+ +W ELDYL
Sbjct: 62 FQCDDGWVPIYTDESKTLAVMSIGFLLKNRTDPVIWRGPKKTMMIKQFLSDVKWDELDYL 121
Query: 181 VIDMPPGTGDIQLTLCQV---VPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVE 237
+ID PPGT D +T+ + VP A+IVTTPQ +A DV K + K + + +VE
Sbjct: 122 IIDTPPGTSDEHITVMECLREVPCNGAIIVTTPQGVALDDVRKEITFCKKTGIKLLGIVE 181
Query: 238 NMCHFDADG--KRYYPFGRGSGSQVVQQFGIPHLFDLPIRP---TLSASGDSGMPEV 289
NM F + F G+++ +PHL LPI P L+ S S + E+
Sbjct: 182 NMSGFVCPHCTECTNIFSSNGGAELANLAQVPHLGTLPIDPRVGVLAGSTASALDEL 238
>sp|Q5I0L4|NUBP1_RAT Cytosolic Fe-S cluster assembly factor NUBP1 OS=Rattus norvegicus
GN=Nubp1 PE=2 SV=1
Length = 320
Score = 136 bits (342), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 131/237 (55%), Gaps = 10/237 (4%)
Query: 59 EQLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMG-ARVGIFDADVYGPSLPTMV 117
E++ E ++ + + + V S KGGVGKST + +LA+ LA G +V + D D+ GPS+P ++
Sbjct: 44 EEIREKMKTVRHRILVLSGKGGVGKSTFSAHLAHGLAEDGDTQVALLDIDICGPSIPKIM 103
Query: 118 SPENRLLEMNPEKRTIIPTE-YLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWG 175
E + + + + E LGV V F S A++ RGP +G+I Q L +WG
Sbjct: 104 GLEGEQVHQSGSGWSPVYVEDNLGVMSVGFLLSSPDDAVIWRGPKKNGMIKQFLRDVDWG 163
Query: 176 ELDYLVIDMPPGTGDIQLTLCQVVP---LTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPC 232
++DYLVID PPGT D L++ Q + + AVI+TTPQ++A DV K + K+K+P
Sbjct: 164 DVDYLVIDTPPGTSDEHLSVVQYLAAAHIDGAVILTTPQEVALQDVRKEISFCHKVKLPI 223
Query: 233 IAVVENMCHFDA-DGKR---YYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSG 285
I VVENM F KR +P G + Q IP L +P+ P + S D G
Sbjct: 224 IGVVENMSGFICPKCKRESQIFPPTTGGAEAMCQALKIPLLGKVPLDPHIGKSCDKG 280
>sp|Q24K00|NUBP1_BOVIN Cytosolic Fe-S cluster assembly factor NUBP1 OS=Bos taurus GN=NUBP1
PE=2 SV=1
Length = 320
Score = 135 bits (340), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/237 (35%), Positives = 129/237 (54%), Gaps = 10/237 (4%)
Query: 59 EQLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLA-GMGARVGIFDADVYGPSLPTMV 117
E++ E ++ + + + V S KGGVGKST + +LA+ LA +V + D D+ GPS+P ++
Sbjct: 44 EEIKEKMKTVKHKILVLSGKGGVGKSTFSAHLAHGLAEDENTQVALLDIDICGPSIPKIM 103
Query: 118 SPENRLLEMNPEKRT-IIPTEYLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWG 175
E + + + + + LGV V F S A++ RGP +G+I Q L +WG
Sbjct: 104 GLEGEQVHQSGSGWSPVFLEDNLGVMSVGFLLSSPDDAVIWRGPKKNGMIKQFLRDVDWG 163
Query: 176 ELDYLVIDMPPGTGDIQLTLCQVVP---LTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPC 232
E+DYL++D PPGT D L++ Q + + AVI+TTPQ+++ DV K + K+K+P
Sbjct: 164 EVDYLIVDTPPGTSDEHLSVVQYLTAAHIDGAVIITTPQEVSLQDVRKEISFCHKVKLPI 223
Query: 233 IAVVENMCHFDA----DGKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSG 285
I VVENM F + +P G + Q IP L +P+ P + S D G
Sbjct: 224 IGVVENMSGFICPKCQKESQIFPPTTGGAEAMCQDLKIPLLGKVPLDPRIGKSCDKG 280
>sp|B3RPX4|NUBP2_TRIAD Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Trichoplax
adhaerens GN=TRIADDRAFT_53697 PE=3 SV=1
Length = 265
Score = 135 bits (339), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 86/230 (37%), Positives = 127/230 (55%), Gaps = 13/230 (5%)
Query: 67 KISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEM 126
KI ++V + S KGGVGKSTVA +A LA G +VGI D D+ GPS+P ++ E++ ++
Sbjct: 12 KIKSVVLILSGKGGVGKSTVASQIALELANGGNKVGILDVDLCGPSIPRVLGLEDK--DV 69
Query: 127 NPEKRTIIP-----TEYLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWGELDYL 180
+ IP E L V + F A++ RGP + +I Q L+ WG+LDYL
Sbjct: 70 HQCADGWIPVYADKNEKLAVMSIGFLLRNSKDAVVWRGPKKNAMIKQFLSDVVWGDLDYL 129
Query: 181 VIDMPPGTGDIQLTLCQVV---PLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVE 237
+ID PPGT D +T+ + V LT AV+VTTPQ +A DV + + K+ +P + +VE
Sbjct: 130 IIDTPPGTSDEHITVAENVRGLNLTGAVMVTTPQAVALGDVRREITFCKKVGIPIVGIVE 189
Query: 238 NMCHFDADG--KRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSG 285
NM + + F +G G + Q +P L LP+ P L+ S + G
Sbjct: 190 NMSGYTCPNCSECTNIFSKGGGEALAQLTQVPFLGCLPLDPKLTMSIEDG 239
>sp|Q5EB25|NUBP1_XENTR Cytosolic Fe-S cluster assembly factor nubp1 OS=Xenopus tropicalis
GN=nubp1 PE=2 SV=1
Length = 320
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 129/237 (54%), Gaps = 10/237 (4%)
Query: 59 EQLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGAR-VGIFDADVYGPSLPTMV 117
E++ E L + + + V S KGGVGKST + +LA+ LA ++ V + D D+ GPS+P M+
Sbjct: 48 EEIKEKLSSVKHKILVLSGKGGVGKSTFSAHLAHGLAQDESKEVALLDVDICGPSIPKMM 107
Query: 118 SPENRLLEMNPEKRTIIPTE-YLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWG 175
E + + + + E L V V F S A++ RGP +G+I Q L +WG
Sbjct: 108 GLEGEQVHQSGSGWSPVYVEDNLAVMSVGFLLSSPDDAVIWRGPKKNGMIKQFLRDVDWG 167
Query: 176 ELDYLVIDMPPGTGDIQLTLCQ---VVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPC 232
E+DYL+ID PPGT D L++ Q V + AVI+TTPQ+++ DV K + K+K+P
Sbjct: 168 EVDYLIIDTPPGTSDEHLSVVQYLSVAGIDGAVIITTPQEVSLQDVRKEINFCHKVKLPI 227
Query: 233 IAVVENMCHFDA----DGKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSG 285
I VVENM F + + +P G ++ + L +P+ P + S D+G
Sbjct: 228 IGVVENMSGFICPKCKNESQIFPPTTGGAEKMCTDLNVSLLGKVPLDPNIGKSCDTG 284
>sp|A7RUD5|NUBP1_NEMVE Cytosolic Fe-S cluster assembly factor NUBP1 homolog
OS=Nematostella vectensis GN=v1g236650 PE=3 SV=1
Length = 318
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 149/285 (52%), Gaps = 11/285 (3%)
Query: 45 NVTMSAQPARPI-FAEQLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGAR-VG 102
+ S++PA P ++ E L + + + V S KGGVGKST +LA+ LA R V
Sbjct: 33 QICASSKPAPPDPDLGKIKERLSSVKHKILVLSGKGGVGKSTFTAHLAHGLAADEDRQVA 92
Query: 103 IFDADVYGPSLPTMVSPENRLLEMNPEKRTIIPTE-YLGVKLVSFGFSGQGRAIM-RGPM 160
+ D D+ GPS+PT+ + + + + + E LGV V F + A++ RGP
Sbjct: 93 VLDIDICGPSIPTVFGLQGEQVHQSGSGWSPVYVEDNLGVMSVGFLLAKPTDAVIWRGPK 152
Query: 161 VSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQVVPLT---AAVIVTTPQKLAFID 217
+G+I Q L +WG+ D+LV+D PPGT D L++ Q + T AV+VTTPQ+++ +D
Sbjct: 153 KNGLIKQFLRDVDWGDADFLVVDTPPGTSDEHLSIIQYLNQTEVDGAVVVTTPQEVSLLD 212
Query: 218 VAKGVRMFSKLKVPCIAVVENM----CHFDADGKRYYPFGRGSGSQVVQQFGIPHLFDLP 273
V K + K+++P I VVENM C + +P G ++ + +P L +P
Sbjct: 213 VRKEISFCKKVRLPVIGVVENMSVFVCPNCKKESQIFPPTTGGAEKMAVEMKVPFLGRIP 272
Query: 274 IRPTLSASGDSGMPEVAADPCGEVANTFQDLGVCVVQQCAKIRQQ 318
+ P + + D G ++ P ++++D+ +V+ C + Q
Sbjct: 273 LDPRIGRACDEGKSFLSEIPDSPATSSYKDIIEKIVKYCVASQHQ 317
>sp|Q29DB7|NUBP2_DROPS Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Drosophila
pseudoobscura pseudoobscura GN=GA18483 PE=3 SV=2
Length = 258
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 126/245 (51%), Gaps = 12/245 (4%)
Query: 65 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLL 124
L K+ N++ V S KGGVGKSTV+ LA L G +VG+ D D+ GPS+P ++ E +
Sbjct: 2 LDKVKNVIIVLSGKGGVGKSTVSTQLALALRHSGHKVGLLDIDLCGPSVPFLLGLEGSNI 61
Query: 125 EMNPEKRTIIPTE-YLGVKLVSFGFSGQGRA---IMRGPMVSGVINQLLTTTEWGELDYL 180
E I T+ + ++S GF + R I RGP + +I Q LT +W ELDYL
Sbjct: 62 YQCDEGWVPIYTDASKTLAVMSIGFLLKNRTDPVIWRGPKKTMMIRQFLTDVKWEELDYL 121
Query: 181 VIDMPPGTGDIQLTLCQV---VPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVE 237
+ID PPGT D +T+ + VP A+IVTTPQ +A DV K + K + + +VE
Sbjct: 122 IIDTPPGTSDEHITVMECMREVPCNGAIIVTTPQSVALDDVRKEITFCKKTGIKLLGIVE 181
Query: 238 NMCHFDADGKRYYP--FGRGSGSQVVQQFGIPHLFDLPIRP---TLSASGDSGMPEVAAD 292
NM F F G ++ IPHL LPI P L+ S S + E+
Sbjct: 182 NMSGFVCPNCTNCTNIFSSNGGVELAHLVQIPHLGTLPIDPRVGVLAGSTASVLDELPDS 241
Query: 293 PCGEV 297
P +V
Sbjct: 242 PTAQV 246
>sp|Q5I050|NUP1B_XENLA Cytosolic Fe-S cluster assembly factor nubp1-B OS=Xenopus laevis
GN=nubp1-b PE=2 SV=1
Length = 315
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/237 (35%), Positives = 128/237 (54%), Gaps = 10/237 (4%)
Query: 59 EQLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLA-GMGARVGIFDADVYGPSLPTMV 117
E++ E + + + + V S KGGVGKST + +LA+ LA G V + D D+ GPS+P M+
Sbjct: 48 EEIKEKMSLVKHKILVLSGKGGVGKSTFSAHLAHGLAQDEGKEVALLDVDICGPSIPRMM 107
Query: 118 SPENRLLEMNPEKRTIIPTE-YLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWG 175
E + + + + E L V V F S A++ RGP +G+I Q L +WG
Sbjct: 108 GLEGEQVHQSGSGWSPVYVEDNLAVMSVGFLLSSPDDAVIWRGPKKNGMIKQFLRDVDWG 167
Query: 176 ELDYLVIDMPPGTGDIQLTLCQVVP---LTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPC 232
E+DYL++D PPGT D L++ Q + + AVIVTTPQ+++ DV K + K+K+P
Sbjct: 168 EVDYLIVDTPPGTSDEHLSVVQYLSAAGIDGAVIVTTPQEVSLQDVRKEINFCRKVKLPI 227
Query: 233 IAVVENMCHFDA----DGKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSG 285
I VVENM F + + +P G ++ + L +P+ P + S D+G
Sbjct: 228 IGVVENMSGFICPKCENESQIFPPTTGGAEKMCTDLNVSLLGKVPLDPNIGKSCDTG 284
>sp|Q6P298|NUBP1_DANRE Cytosolic Fe-S cluster assembly factor nubp1 OS=Danio rerio
GN=nubp1 PE=2 SV=2
Length = 321
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 146/280 (52%), Gaps = 17/280 (6%)
Query: 59 EQLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGAR-VGIFDADVYGPSLPTMV 117
E++ + + + + + V S KGGVGKST + +L++ LA ++ V + D D+ GPS+P ++
Sbjct: 48 EEIKQKMTSVKHKILVLSGKGGVGKSTFSAHLSHALASDSSKEVALLDVDICGPSIPKIM 107
Query: 118 SPENRLLEMNPEKRTIIPTE-YLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWG 175
E + + + + E L V + F S A++ RGP +G+I Q L +WG
Sbjct: 108 GLEGEQVHQSGSGWSPVYVEDNLAVMSIGFLLSSPDDAVIWRGPKKNGMIKQFLRDVDWG 167
Query: 176 ELDYLVIDMPPGTGDIQLTLCQVVP---LTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPC 232
E+DYL++D PPGT D L++ Q + + AVI+TTPQ+++ DV K +R K+ +P
Sbjct: 168 EVDYLIVDTPPGTSDEHLSIVQYLSGAGIDGAVIITTPQEVSLQDVRKEIRFCKKVNLPI 227
Query: 233 IAVVENMCHFDA----DGKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGMPE 288
+ V+ENM F + + +P G ++ ++ +P L +P+ P + S D G
Sbjct: 228 LGVIENMSGFVCPKCKNTSQIFPPTTGGAQRMCEELNLPLLGRIPLDPRIGKSCDEGKSF 287
Query: 289 VAADPCGEVANTFQDLGVCVVQQCAKIRQQVSTAVIYDKS 328
+ P A +Q +VQ KIR ++ D S
Sbjct: 288 LTEVPDSPAAAAYQS----IVQ---KIRDYCASHSASDDS 320
>sp|Q9R060|NUBP1_MOUSE Cytosolic Fe-S cluster assembly factor NUBP1 OS=Mus musculus
GN=Nubp1 PE=1 SV=1
Length = 320
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 130/237 (54%), Gaps = 10/237 (4%)
Query: 59 EQLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMG-ARVGIFDADVYGPSLPTMV 117
E++ E ++ + + + V S KGGVGKST + +LA+ LA G +V + D D+ GPS+P ++
Sbjct: 44 EEIREKMKTVRHKLLVLSGKGGVGKSTFSAHLAHGLAEDGDTQVALLDIDICGPSIPKIM 103
Query: 118 SPENRLLEMNPEKRT-IIPTEYLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWG 175
E + + + + + LGV V F S A++ RGP +G+I Q L +WG
Sbjct: 104 GLEGEQVHQSGSGWSPVYVDDNLGVMSVGFLLSSPDDAVIWRGPKKNGMIKQFLRDVDWG 163
Query: 176 ELDYLVIDMPPGTGDIQLTLCQVVP---LTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPC 232
++DYL++D PPGT D L++ Q + + AVI+TTPQ++A DV K + K+K+P
Sbjct: 164 DVDYLIVDTPPGTSDEHLSVVQYLAAAHIDGAVILTTPQEVALQDVRKEISFCHKVKLPI 223
Query: 233 IAVVENMCHFDA----DGKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSG 285
I VVENM F + +P G + Q IP L +P+ P + S D G
Sbjct: 224 IGVVENMSGFICPKCKKESQIFPPTTGGAEAMCQDLRIPLLGKVPLDPHIGKSCDKG 280
>sp|B0XDJ0|NUBP2_CULQU Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Culex
quinquefasciatus GN=CPIJ017390 PE=3 SV=1
Length = 257
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/240 (37%), Positives = 126/240 (52%), Gaps = 13/240 (5%)
Query: 65 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLL 124
L KI +I+ V S KGGVGKSTV+ LA TLA G +VG+ D D+ GPS+P ++ E
Sbjct: 2 LDKIKHIILVLSGKGGVGKSTVSTQLALTLAESGHKVGLLDIDLCGPSVPFLLGLEGH-- 59
Query: 125 EMNPEKRTIIPT-----EYLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWGELD 178
+++ ++ +P + L V + F + A++ RGP + +I Q L W ELD
Sbjct: 60 DVHQCEQGWVPVFSGADQRLAVMSIGFLLKNRDEAVIWRGPKKTAMIKQFLEDVAWDELD 119
Query: 179 YLVIDMPPGTGDIQLTLCQV---VPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAV 235
YLVID PPGT D +T+ + V A+IVTTPQ++A DV K V K + + +
Sbjct: 120 YLVIDTPPGTSDEHITVMECLKGVNADGAIIVTTPQEMALEDVRKEVTFCKKTGIAILGI 179
Query: 236 VENMCHFDA--DGKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGMPEVAADP 293
VENM F + F G G + + +PHL LPI P + A +G V P
Sbjct: 180 VENMSGFVCPNCAECTKIFSSGGGVALAELAQVPHLGTLPIDPRVGALAGTGKACVTELP 239
>sp|Q3KQF0|NUP1A_XENLA Cytosolic Fe-S cluster assembly factor nubp1-A OS=Xenopus laevis
GN=nubp1-a PE=2 SV=1
Length = 315
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 139/275 (50%), Gaps = 12/275 (4%)
Query: 21 CPIKDMFEQRANEVVLAIPWVNKVNVTMSAQPARPIFAEQLPEGLQKISNIVAVSSCKGG 80
CP D E + P + +A P I E++ E + + + + V S KGG
Sbjct: 12 CPGTDSTEAGKSSACQGCPNQSICASGAAAGPDPAI--EEIKEKMSLVKHKILVLSGKGG 69
Query: 81 VGKSTVAVNLAYTLA-GMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRTIIPTE-Y 138
VGKST + +LA+ LA G V + D D+ GPS+P M+ E + + + + E
Sbjct: 70 VGKSTFSAHLAHGLAQDEGKEVALLDVDICGPSIPKMMGLEGEQVHQSGSGWSPVYVEDN 129
Query: 139 LGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 197
L V V F S A++ RGP +G+I Q L +WG++DYL++D PPGT D L++ Q
Sbjct: 130 LAVMSVGFLLSSPDDAVIWRGPKKNGMIKQFLRDVDWGDVDYLIVDTPPGTSDEHLSVVQ 189
Query: 198 VVP---LTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVENMCHFDA----DGKRYY 250
+ + AVI+TTPQ+++ DV K + K+K+P I VVENM F + + +
Sbjct: 190 YLSAAGIDGAVIITTPQEVSLQDVRKEINFCRKVKLPIIGVVENMSGFICPKCKNESQIF 249
Query: 251 PFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSG 285
P G ++ + L +P+ P + S D+G
Sbjct: 250 PPTTGGAEKMCTDLSVSLLGKVPLDPNIGKSCDTG 284
>sp|B3M9R3|NUBP2_DROAN Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Drosophila
ananassae GN=GF10354 PE=3 SV=1
Length = 261
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/221 (38%), Positives = 118/221 (53%), Gaps = 9/221 (4%)
Query: 65 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPE-NRL 123
L K+ N++ V S KGGVGKSTV+ LA L G +VG+ D D+ GPS+P ++ E + +
Sbjct: 2 LDKVKNVIVVLSGKGGVGKSTVSTQLALALRQTGHKVGLLDIDLCGPSVPYLLGLEGSDI 61
Query: 124 LEMNPEKRTIIPTEYLGVKLVSFGFSGQGRA---IMRGPMVSGVINQLLTTTEWGELDYL 180
+ + I E + ++S GF + R I RGP + +I Q LT +W ELDYL
Sbjct: 62 FQCDEGWVPIYTDESQTLAVMSIGFLLKNRTDPVIWRGPKKTMMIRQFLTDVKWDELDYL 121
Query: 181 VIDMPPGTGDIQLTLCQV---VPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVE 237
+ID PPGT D +T+ + VP A+IVTTPQ +A DV K + K + + +VE
Sbjct: 122 IIDTPPGTSDEHITVMECLREVPCNGAIIVTTPQGVALDDVRKEITFCKKTGIKLLGIVE 181
Query: 238 NMCHFDADGKRYYP--FGRGSGSQVVQQFGIPHLFDLPIRP 276
NM F F G ++ + IPHL LPI P
Sbjct: 182 NMSGFVCPHCTSCTNIFSSNGGVELAKYAQIPHLGTLPIDP 222
>sp|B4KY56|NUBP2_DROMO Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Drosophila
mojavensis GN=GI13405 PE=3 SV=1
Length = 264
Score = 133 bits (334), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/252 (36%), Positives = 133/252 (52%), Gaps = 18/252 (7%)
Query: 65 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENR-L 123
L K+ N++ V S KGGVGKSTV+ LA L G +VG+ D D+ GPS+P ++ E R +
Sbjct: 2 LDKVKNVIVVLSGKGGVGKSTVSTQLALALRATGHKVGLLDIDLCGPSVPHLLGLEGRDI 61
Query: 124 LEMNPEKRTIIPTEYLGVKLVSFGFSGQGR---AIMRGPMVSGVINQLLTTTEWGELDYL 180
+ + I E + ++S GF + R I RGP + +I Q LT +W +LDYL
Sbjct: 62 YQCDDGWVPIYTDESKTLAVMSIGFLLKNRNDPVIWRGPKKTMMIKQFLTDVKWEDLDYL 121
Query: 181 VIDMPPGTGDIQLTLCQV---VPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVE 237
+ID PPGT D +T+ + VP A+IVTTPQ +A DV K + K + + +VE
Sbjct: 122 IIDTPPGTSDEHITVMECMREVPCNGAIIVTTPQGVALDDVRKELTFCKKTGIKVLGIVE 181
Query: 238 NM----CHFDADGKRYY-PFGRGSGSQVVQQFGIPHLFDLPIRP---TLSASGDSGMPEV 289
NM C +D + FG G+++ Q +P L LPI P L+ S S + E+
Sbjct: 182 NMSGFVCPHCSDCTNIFSSFG---GAELAQLAQVPLLGTLPIDPRVGVLAGSTASVLNEL 238
Query: 290 AADPCGEVANTF 301
A +V +
Sbjct: 239 ADSSTAQVLRSI 250
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 161,713,992
Number of Sequences: 539616
Number of extensions: 7022326
Number of successful extensions: 17929
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 199
Number of HSP's successfully gapped in prelim test: 58
Number of HSP's that attempted gapping in prelim test: 17318
Number of HSP's gapped (non-prelim): 271
length of query: 423
length of database: 191,569,459
effective HSP length: 120
effective length of query: 303
effective length of database: 126,815,539
effective search space: 38425108317
effective search space used: 38425108317
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)