BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014514
(423 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2QZ86|ACLA2_ORYSJ ATP-citrate synthase alpha chain protein 2 OS=Oryza sativa subsp.
japonica GN=ACLA-2 PE=2 SV=2
Length = 423
Score = 803 bits (2073), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/423 (90%), Positives = 404/423 (95%)
Query: 1 MARKKIREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPD 60
MARKKIREYDSKRLLKEHLKRLAG+DLQI SAQVT+STDF+EL N++PWLS+ +LVVKPD
Sbjct: 1 MARKKIREYDSKRLLKEHLKRLAGIDLQILSAQVTQSTDFTELVNQQPWLSTMKLVVKPD 60
Query: 61 MLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQEYYLS 120
MLFGKRGKSGLVALNLD+AQV EFVK RLG EVEMGGCK PITTFIVEPFVPH+QEYYLS
Sbjct: 61 MLFGKRGKSGLVALNLDIAQVKEFVKERLGVEVEMGGCKAPITTFIVEPFVPHDQEYYLS 120
Query: 121 IVSDRLGCTISFSECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFRGKIGD 180
IVS+RLG TISFSECGGIEIEENWDKVKTIFLPTEK MT DACAPLIATLPLE RGKIGD
Sbjct: 121 IVSERLGSTISFSECGGIEIEENWDKVKTIFLPTEKPMTPDACAPLIATLPLEARGKIGD 180
Query: 181 FIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFG 240
FI GVFAVFQDLDFSF+EMNPFT+VNGEPYPLDMRGELDDTAAFKNFKKW NIEFPLPFG
Sbjct: 181 FIKGVFAVFQDLDFSFLEMNPFTIVNGEPYPLDMRGELDDTAAFKNFKKWGNIEFPLPFG 240
Query: 241 RVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN 300
RVLSSTE FIH LDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN
Sbjct: 241 RVLSSTEGFIHDLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN 300
Query: 301 YAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRALRE 360
YAEYSGAPNEEEVLQYARVV+DCATADPDGRKRALLIGGGIANFTDV TF+GIIRALRE
Sbjct: 301 YAEYSGAPNEEEVLQYARVVLDCATADPDGRKRALLIGGGIANFTDVGATFSGIIRALRE 360
Query: 361 KESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLEVYGPEATMTGICKQAIDCIM 420
KESKLKAARMHI+VRRGGPNYQTGLAKMR LG ELG+P+EVYGPEATMTGICKQAI+C+M
Sbjct: 361 KESKLKAARMHIYVRRGGPNYQTGLAKMRKLGAELGVPIEVYGPEATMTGICKQAIECVM 420
Query: 421 SAS 423
+A+
Sbjct: 421 AAA 423
>sp|O80526|ACLA3_ARATH ATP-citrate synthase alpha chain protein 3 OS=Arabidopsis thaliana
GN=ACLA-3 PE=2 SV=1
Length = 424
Score = 797 bits (2058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/420 (90%), Positives = 402/420 (95%)
Query: 1 MARKKIREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPD 60
MARKKIREYDSKRLLKEHLKRLA +DLQI SAQVTESTDF+ELTN+E WLSS++LVVKPD
Sbjct: 1 MARKKIREYDSKRLLKEHLKRLANIDLQIRSAQVTESTDFTELTNQESWLSSTKLVVKPD 60
Query: 61 MLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQEYYLS 120
MLFGKRGKSGLVAL LDLA+VA+FVK RLGTEVEM GCK PITTFIVEPFVPH+QEYYLS
Sbjct: 61 MLFGKRGKSGLVALKLDLAEVADFVKARLGTEVEMEGCKAPITTFIVEPFVPHDQEYYLS 120
Query: 121 IVSDRLGCTISFSECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFRGKIGD 180
IVSDRLGCTISFSECGGIEIEENWDKVKTIFLP EK MTL+ CAPLIATLPLE R KIG+
Sbjct: 121 IVSDRLGCTISFSECGGIEIEENWDKVKTIFLPAEKSMTLEVCAPLIATLPLEVRAKIGN 180
Query: 181 FIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFG 240
FIMG FAVFQDLDFSF+EMNPFTLV+GEP+PLDMRGELDDTAAFKNF KW +IEFPLPFG
Sbjct: 181 FIMGAFAVFQDLDFSFMEMNPFTLVDGEPFPLDMRGELDDTAAFKNFNKWGDIEFPLPFG 240
Query: 241 RVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN 300
RVLSSTE+FIH LDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN
Sbjct: 241 RVLSSTENFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN 300
Query: 301 YAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRALRE 360
YAEYSGAPNEEEVLQYARVVIDCAT DPDGRKRALLIGGGIANFTDVA TFNGIIRALRE
Sbjct: 301 YAEYSGAPNEEEVLQYARVVIDCATTDPDGRKRALLIGGGIANFTDVAATFNGIIRALRE 360
Query: 361 KESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLEVYGPEATMTGICKQAIDCIM 420
KE++LKA+RMHI+VRRGGPNYQTGLA+MRALGEELG+PLEVYGPEATMTGICK+AIDCIM
Sbjct: 361 KETRLKASRMHIYVRRGGPNYQTGLARMRALGEELGVPLEVYGPEATMTGICKRAIDCIM 420
>sp|Q2QNG7|ACLA3_ORYSJ ATP-citrate synthase alpha chain protein 3 OS=Oryza sativa subsp.
japonica GN=ACLA-3 PE=2 SV=1
Length = 423
Score = 792 bits (2046), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/421 (89%), Positives = 400/421 (95%)
Query: 1 MARKKIREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPD 60
MARKKIREYDSKRLL+EHLKRLA +DL I SAQVTESTDF+EL N+EPWLSS +LVVKPD
Sbjct: 1 MARKKIREYDSKRLLREHLKRLAAIDLHILSAQVTESTDFTELVNQEPWLSSMKLVVKPD 60
Query: 61 MLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQEYYLS 120
MLFGKRGKSGLVALNLDLAQV +FVK RLG EVEMGGCK PITTFIVEPFVPH+QEYYLS
Sbjct: 61 MLFGKRGKSGLVALNLDLAQVRQFVKERLGVEVEMGGCKAPITTFIVEPFVPHDQEYYLS 120
Query: 121 IVSDRLGCTISFSECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFRGKIGD 180
IVS+RLG TISFSECGGIEIEENWDKVKT+FLPTEK MT DACAPLIATLPLE R KIGD
Sbjct: 121 IVSERLGSTISFSECGGIEIEENWDKVKTVFLPTEKAMTPDACAPLIATLPLEVRTKIGD 180
Query: 181 FIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFG 240
FI GV++VFQDLDFSF+EMNPFT+VNGEPYPLDMRGELDDTAAFKNFKKW NI+FPLPFG
Sbjct: 181 FIRGVYSVFQDLDFSFLEMNPFTMVNGEPYPLDMRGELDDTAAFKNFKKWGNIQFPLPFG 240
Query: 241 RVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN 300
RVLS +ESFIH LDEKTS+SLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN
Sbjct: 241 RVLSPSESFIHELDEKTSSSLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN 300
Query: 301 YAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRALRE 360
YAEYSGAPNEEEVLQYARVV+DCATADPDGRKRALLIGGGIANFTDVA TF+GIIRALRE
Sbjct: 301 YAEYSGAPNEEEVLQYARVVLDCATADPDGRKRALLIGGGIANFTDVAATFSGIIRALRE 360
Query: 361 KESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLEVYGPEATMTGICKQAIDCIM 420
KESKLKAARM+I+VRRGGPNYQTGLAKMR LG ELG+P+EVYGPEATMTGICKQAIDCIM
Sbjct: 361 KESKLKAARMNIYVRRGGPNYQTGLAKMRTLGAELGVPIEVYGPEATMTGICKQAIDCIM 420
Query: 421 S 421
+
Sbjct: 421 A 421
>sp|Q53JY8|ACLA1_ORYSJ ATP-citrate synthase subunit alpha chain protein 1 OS=Oryza sativa
subsp. japonica GN=ACLA-1 PE=3 SV=2
Length = 407
Score = 742 bits (1915), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/424 (85%), Positives = 383/424 (90%), Gaps = 18/424 (4%)
Query: 1 MARKKIREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPD 60
MARKKIREYDSKRLLKEHLKRLAG+DLQI SAQVT+STDF+EL N++PWLS+ +LVVKPD
Sbjct: 1 MARKKIREYDSKRLLKEHLKRLAGIDLQILSAQVTQSTDFTELVNQQPWLSTMKLVVKPD 60
Query: 61 MLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQEYYLS 120
MLFGKRGKSGLVALNLD+AQV EFVK RLG EVEMGGCK PITTFIVEPFVPH+QEYYLS
Sbjct: 61 MLFGKRGKSGLVALNLDIAQVKEFVKERLGVEVEMGGCKAPITTFIVEPFVPHDQEYYLS 120
Query: 121 IVSDRLGCTISFSECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFRGKIGD 180
IVS+RLG TISFSECGGIEIEENWDKVKTIFL TEK MT DACAPLIATLPLE RGKIGD
Sbjct: 121 IVSERLGSTISFSECGGIEIEENWDKVKTIFLSTEKPMTPDACAPLIATLPLEARGKIGD 180
Query: 181 FIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFK-KWANIEFPLPF 239
FI GVFAVFQDLDFSF+EMNPFT+VNGEPYPLDMRGELDDTAAFK + KW NIEFPLPF
Sbjct: 181 FIKGVFAVFQDLDFSFLEMNPFTIVNGEPYPLDMRGELDDTAAFKTSRSKWGNIEFPLPF 240
Query: 240 GRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELG 299
GRVLSSTE FIH LDEKTSASLKFTVLNPKGRIWTMVAGG EL
Sbjct: 241 GRVLSSTEGFIHDLDEKTSASLKFTVLNPKGRIWTMVAGG-----------------ELE 283
Query: 300 NYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRALR 359
NYAEYSGAPNEEEVLQYARVV+DCATADPDGRKRALLIGGGIANFTDV TF+GIIRALR
Sbjct: 284 NYAEYSGAPNEEEVLQYARVVLDCATADPDGRKRALLIGGGIANFTDVGATFSGIIRALR 343
Query: 360 EKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLEVYGPEATMTGICKQAIDCI 419
EKESKLKAARMHI+VRRGGPNYQTGLAKMR LG ELG+P+EVYGPEATMTGICKQAI+C+
Sbjct: 344 EKESKLKAARMHIYVRRGGPNYQTGLAKMRKLGAELGVPIEVYGPEATMTGICKQAIECV 403
Query: 420 MSAS 423
M+A+
Sbjct: 404 MAAA 407
>sp|Q9SGY2|ACLA1_ARATH ATP-citrate synthase alpha chain protein 1 OS=Arabidopsis thaliana
GN=ACLA-1 PE=1 SV=1
Length = 423
Score = 733 bits (1891), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/423 (81%), Positives = 384/423 (90%)
Query: 1 MARKKIREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPD 60
MARKKIREYDSKRL+KEH KRL+G +L I S Q+ E+TD +EL KEPWLSS +LVVKPD
Sbjct: 1 MARKKIREYDSKRLVKEHFKRLSGKELPIRSVQINETTDLNELVEKEPWLSSEKLVVKPD 60
Query: 61 MLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQEYYLS 120
MLFGKRGKSGLVAL LD A VA FVK RLG EVEM GCKGPITTFIVEPFVPHN+EYYL+
Sbjct: 61 MLFGKRGKSGLVALKLDFADVATFVKERLGKEVEMSGCKGPITTFIVEPFVPHNEEYYLN 120
Query: 121 IVSDRLGCTISFSECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFRGKIGD 180
+VSDRLGC+ISFSECGGIEIEENWDKVKTIFLPT +T + CAPL+ATLPLE + +I +
Sbjct: 121 VVSDRLGCSISFSECGGIEIEENWDKVKTIFLPTGASLTPEICAPLVATLPLEIKAEIEE 180
Query: 181 FIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFG 240
FI +F +FQDLDF+F+EMNPFTLV+G PYPLDMRGELDDTAAFKNFKKW +IEFPLPFG
Sbjct: 181 FIKVIFTLFQDLDFTFLEMNPFTLVDGSPYPLDMRGELDDTAAFKNFKKWGDIEFPLPFG 240
Query: 241 RVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN 300
RV+S TESFIH LDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN
Sbjct: 241 RVMSPTESFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN 300
Query: 301 YAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRALRE 360
YAEYSGAP E+EVLQYARVVIDCATA+PDG+ RAL+IGGGIANFTDVA TFNGIIRAL+E
Sbjct: 301 YAEYSGAPKEDEVLQYARVVIDCATANPDGKSRALVIGGGIANFTDVAATFNGIIRALKE 360
Query: 361 KESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLEVYGPEATMTGICKQAIDCIM 420
KE+KLKAARMHIFVRRGGPNYQ GLAKMRALG+++G+P+EVYGPEATMTGICK+AI I
Sbjct: 361 KEAKLKAARMHIFVRRGGPNYQKGLAKMRALGDDIGVPIEVYGPEATMTGICKEAIQYIT 420
Query: 421 SAS 423
+A+
Sbjct: 421 AAA 423
>sp|O22718|ACLA2_ARATH ATP-citrate synthase alpha chain protein 2 OS=Arabidopsis thaliana
GN=ACLA-2 PE=2 SV=1
Length = 423
Score = 732 bits (1889), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/423 (80%), Positives = 386/423 (91%)
Query: 1 MARKKIREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPD 60
MARKKIREYDSKRL+KEH KRL+G +L I S Q+ + TD +EL +EPWLSS +LVVKPD
Sbjct: 1 MARKKIREYDSKRLVKEHFKRLSGQELPIRSVQINQETDLNELVEREPWLSSEKLVVKPD 60
Query: 61 MLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQEYYLS 120
MLFGKRGKSGLVALNLD A VA FVK RLG EVEM GCKGPITTFIVEPFVPHN+E+YL+
Sbjct: 61 MLFGKRGKSGLVALNLDFADVATFVKERLGKEVEMSGCKGPITTFIVEPFVPHNEEFYLN 120
Query: 121 IVSDRLGCTISFSECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFRGKIGD 180
IVSDRLGC+ISFSECGGI+IEENWDKVKTI +PT +T + CAPL+ATLPLE +G++ D
Sbjct: 121 IVSDRLGCSISFSECGGIDIEENWDKVKTITIPTGASLTFEICAPLVATLPLEIKGELED 180
Query: 181 FIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFG 240
FI +F +F+DLDF+F+EMNPFTLV+G+PYPLDMRGELDDTAAFKNFKKW +IEFP+PFG
Sbjct: 181 FIQVIFTLFEDLDFTFLEMNPFTLVDGKPYPLDMRGELDDTAAFKNFKKWGDIEFPMPFG 240
Query: 241 RVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN 300
RV+SSTESFIH LDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN
Sbjct: 241 RVMSSTESFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN 300
Query: 301 YAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRALRE 360
YAEYSGAP E+EVLQYARVVIDCATA+PDG+ RAL+IGGGIANFTDVA TFNGIIRAL+E
Sbjct: 301 YAEYSGAPKEDEVLQYARVVIDCATANPDGKSRALVIGGGIANFTDVAATFNGIIRALKE 360
Query: 361 KESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLEVYGPEATMTGICKQAIDCIM 420
KE+KLKAARMHIFVRRGGPNYQ GLAKMR+LG+E+G+P+EVYGPEATMTGICK+AI I
Sbjct: 361 KEAKLKAARMHIFVRRGGPNYQKGLAKMRSLGDEIGVPIEVYGPEATMTGICKEAIQYIT 420
Query: 421 SAS 423
+A+
Sbjct: 421 AAA 423
>sp|Q91V92|ACLY_MOUSE ATP-citrate synthase OS=Mus musculus GN=Acly PE=1 SV=1
Length = 1091
Score = 353 bits (905), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 184/419 (43%), Positives = 259/419 (61%), Gaps = 3/419 (0%)
Query: 1 MARKKIREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPD 60
M+ K I E K LL +++ + + + A+VT TD++ L PWL S LVVKPD
Sbjct: 1 MSAKAISEQTGKELLYKYICTTSAIQNRFKYARVTPDTDWAHLLQDHPWLLSQSLVVKPD 60
Query: 61 MLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQ--EYY 118
L +RGK GLV +NL L V ++K RLG E +G KG + F++EPFVPH+Q E+Y
Sbjct: 61 QLIKRRGKLGLVGVNLSLDGVKSWLKPRLGHEATVGKAKGFLKNFLIEPFVPHSQAEEFY 120
Query: 119 LSIVSDRLGCTISFSECGGIEIEENWDKVKTIFLPT-EKHMTLDACAPLIATLPLEFRGK 177
+ I + R G + F GG+++ + K + + + EK T D L+ P + +
Sbjct: 121 VCIYATREGDYVLFHHEGGVDVGDVDAKAQKLLVGVDEKLNTEDIKRHLLVHAPEDKKEV 180
Query: 178 IGDFIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWANIEFPL 237
+ FI G+F ++DL F+++E+NP + Y LD+ ++D TA + KW +IEFP
Sbjct: 181 LASFISGLFNFYEDLYFTYLEINPLVVTKDGVYILDLAAKVDATADYICKVKWGDIEFPP 240
Query: 238 PFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASE 297
PFGR E++I LD K+ ASLK T+LNPKGRIWTMVAGGGASV+Y+DT+ DLG +E
Sbjct: 241 PFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLGGVNE 300
Query: 298 LGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRA 357
L NY EYSGAP+E++ YA+ ++ T + + L+IGG IANFT+VA TF GI+RA
Sbjct: 301 LANYGEYSGAPSEQQTYDYAKTILSLMTREKHPEGKILIIGGSIANFTNVAATFKGIVRA 360
Query: 358 LREKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLEVYGPEATMTGICKQAI 416
+R+ + LK + IFVRRGGPNYQ GL M +G+ GIP+ V+G E MT I A+
Sbjct: 361 IRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGIPIHVFGTETHMTAIVGMAL 419
>sp|P16638|ACLY_RAT ATP-citrate synthase OS=Rattus norvegicus GN=Acly PE=1 SV=1
Length = 1100
Score = 351 bits (900), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 184/420 (43%), Positives = 261/420 (62%), Gaps = 7/420 (1%)
Query: 1 MARKKIREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPD 60
M+ K I E K LL +++ + + + A+VT TD++ L PWL S LVVKPD
Sbjct: 1 MSAKAISEQTGKELLYKYICTTSAIQNRFKYARVTPDTDWAHLLQDHPWLLSQSLVVKPD 60
Query: 61 MLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQ--EYY 118
L +RGK GLV +NL L V ++K RLG E +G KG + F++EPFVPH+Q E+Y
Sbjct: 61 QLIKRRGKLGLVGVNLSLDGVKSWLKPRLGHEATVGKAKGFLKNFLIEPFVPHSQAEEFY 120
Query: 119 LSIVSDRLGCTISFSECGGIEIEENWDKVKTIFLPTEKHMTL-DACAPLIATLPLEFRGK 177
+ I + R G + F GG+++ + K + + + ++ + D L+ P + +
Sbjct: 121 VCIYATREGDYVLFHHEGGVDVGDVDTKAQKLLVGVDEKLNAEDIKRHLLVHAPEDKKEI 180
Query: 178 IGDFIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWANIEFPL 237
+ FI G+F ++DL F+++E+NP + Y LD+ ++D TA + KW +IEFP
Sbjct: 181 LASFISGLFNFYEDLYFTYLEINPLVVTKDGVYILDLAAKVDATADYICKVKWGDIEFPP 240
Query: 238 PFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASE 297
PFGR E++I LD K+ ASLK T+LNPKGRIWTMVAGGGASV+Y+DT+ DLG +E
Sbjct: 241 PFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLGGVNE 300
Query: 298 LGNYAEYSGAPNEEEVLQYARVVIDCATAD--PDGRKRALLIGGGIANFTDVATTFNGII 355
L NY EYSGAP+E++ YA+ ++ T + PDG + L+IGG IANFT+VA TF GI+
Sbjct: 301 LANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDG--KILIIGGSIANFTNVAATFKGIV 358
Query: 356 RALREKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLEVYGPEATMTGICKQA 415
RA+R+ + LK + IFVRRGGPNYQ GL M +G+ GIP+ V+G E MT I A
Sbjct: 359 RAIRDYQGSLKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGIPIHVFGTETHMTAIVGMA 418
>sp|Q2TCH3|ACLY_SHEEP ATP-citrate synthase OS=Ovis aries GN=ACLY PE=2 SV=1
Length = 1101
Score = 348 bits (893), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 183/421 (43%), Positives = 260/421 (61%), Gaps = 7/421 (1%)
Query: 1 MARKKIREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPD 60
M+ K I E K LL +++ + + + A+VT TD++ L PWL S LVVKPD
Sbjct: 1 MSAKAISEQTGKELLYKYICTTSAIQNRFKYARVTPDTDWARLLQDHPWLLSQSLVVKPD 60
Query: 61 MLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQE--YY 118
L +RGK GLV +NL L V ++K RLG E +G G + F++EPFVPH QE +Y
Sbjct: 61 QLIKRRGKLGLVGVNLTLDGVKSWLKPRLGQEATVGKATGFLKNFLIEPFVPHTQEEEFY 120
Query: 119 LSIVSDRLGCTISFSECGGIEIEENWDKVKTIFLPTEKHMTL-DACAPLIATLPLEFRGK 177
+ I + R G + F GG+++ + K + + + ++ + D L+ P + +
Sbjct: 121 VCIYATREGDYVLFHHEGGVDVGDVDAKAQKLLVAVDEKLNPEDIKKHLLVHAPEDKKEI 180
Query: 178 IGDFIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWANIEFPL 237
+ FI G+F ++DL F+++E+NP + Y LD+ ++D TA + KW +IEFP
Sbjct: 181 LASFISGLFNFYEDLYFTYLEINPLVVTKDGVYILDLAAKVDATADYICKVKWGDIEFPP 240
Query: 238 PFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASE 297
PFGR E++I LD K+ ASLK T+LNPKGRIWTMVAGGGASV+Y+DT+ DLG +E
Sbjct: 241 PFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLGGVNE 300
Query: 298 LGNYAEYSGAPNEEEVLQYARVVIDCATAD--PDGRKRALLIGGGIANFTDVATTFNGII 355
L NY EYSGAP+E++ YA+ ++ T + PDG + L+IGG IANFT+VA TF GI+
Sbjct: 301 LANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDG--KILIIGGSIANFTNVAATFKGIV 358
Query: 356 RALREKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLEVYGPEATMTGICKQA 415
RA+R+ + LK + IFVRRGGPNYQ GL M +G+ GIP+ V+G E MT I A
Sbjct: 359 RAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGIPIHVFGTETHMTAIVGMA 418
Query: 416 I 416
+
Sbjct: 419 L 419
>sp|Q32PF2|ACLY_BOVIN ATP-citrate synthase OS=Bos taurus GN=ACLY PE=2 SV=1
Length = 1091
Score = 347 bits (890), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 182/421 (43%), Positives = 260/421 (61%), Gaps = 7/421 (1%)
Query: 1 MARKKIREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPD 60
M+ K I E K LL +++ + + + A+VT TD++ L PWL S LVVKPD
Sbjct: 1 MSAKAISEQTGKELLYKYICTTSAIQNRFKYARVTPDTDWARLLQDHPWLLSQSLVVKPD 60
Query: 61 MLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQE--YY 118
L +RGK GL+ +NL L V ++K RLG E +G G + F++EPFVPH QE +Y
Sbjct: 61 QLIKRRGKLGLIGVNLTLDGVKSWLKPRLGQEATVGKATGFLKNFLIEPFVPHTQEEEFY 120
Query: 119 LSIVSDRLGCTISFSECGGIEIEENWDKVKTIFLPTEKHMTL-DACAPLIATLPLEFRGK 177
+ I + R G + F GG+++ + K + + + ++ + D L+ P + +
Sbjct: 121 VCIYATREGDYVLFHHEGGVDVGDVDAKAQKLLVGVDEKLNPEDIKKHLLVHAPEDKKEI 180
Query: 178 IGDFIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWANIEFPL 237
+ FI G+F ++DL F+++E+NP + Y LD+ ++D TA + KW +IEFP
Sbjct: 181 LASFISGLFNFYEDLYFTYLEINPLVVTKDGVYVLDLAAKVDATADYICKVKWGDIEFPP 240
Query: 238 PFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASE 297
PFGR E++I LD K+ ASLK T+LNPKGRIWTMVAGGGASV+Y+DT+ DLG +E
Sbjct: 241 PFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLGGVNE 300
Query: 298 LGNYAEYSGAPNEEEVLQYARVVIDCATAD--PDGRKRALLIGGGIANFTDVATTFNGII 355
L NY EYSGAP+E++ YA+ ++ T + PDG + L+IGG IANFT+VA TF GI+
Sbjct: 301 LANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDG--KILIIGGSIANFTNVAATFKGIV 358
Query: 356 RALREKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLEVYGPEATMTGICKQA 415
RA+R+ + LK + IFVRRGGPNYQ GL M +G+ GIP+ V+G E MT I A
Sbjct: 359 RAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGIPIHVFGTETHMTAIVGMA 418
Query: 416 I 416
+
Sbjct: 419 L 419
>sp|P53396|ACLY_HUMAN ATP-citrate synthase OS=Homo sapiens GN=ACLY PE=1 SV=3
Length = 1101
Score = 347 bits (890), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 183/421 (43%), Positives = 260/421 (61%), Gaps = 7/421 (1%)
Query: 1 MARKKIREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPD 60
M+ K I E K LL + + + + + A+VT TD++ L PWL S LVVKPD
Sbjct: 1 MSAKAISEQTGKELLYKFICTTSAIQNRFKYARVTPDTDWARLLQDHPWLLSQNLVVKPD 60
Query: 61 MLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQ--EYY 118
L +RGK GLV +NL L V ++K RLG E +G G + F++EPFVPH+Q E+Y
Sbjct: 61 QLIKRRGKLGLVGVNLTLDGVKSWLKPRLGQEATVGKATGFLKNFLIEPFVPHSQAEEFY 120
Query: 119 LSIVSDRLGCTISFSECGGIEIEENWDKVKTIFLPTEKHMTL-DACAPLIATLPLEFRGK 177
+ I + R G + F GG+++ + K + + + ++ + D L+ P + +
Sbjct: 121 VCIYATREGDYVLFHHEGGVDVGDVDAKAQKLLVGVDEKLNPEDIKKHLLVHAPEDKKEI 180
Query: 178 IGDFIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWANIEFPL 237
+ FI G+F ++DL F+++E+NP + Y LD+ ++D TA + KW +IEFP
Sbjct: 181 LASFISGLFNFYEDLYFTYLEINPLVVTKDGVYVLDLAAKVDATADYICKVKWGDIEFPP 240
Query: 238 PFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASE 297
PFGR E++I LD K+ ASLK T+LNPKGRIWTMVAGGGASV+Y+DT+ DLG +E
Sbjct: 241 PFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLGGVNE 300
Query: 298 LGNYAEYSGAPNEEEVLQYARVVIDCATAD--PDGRKRALLIGGGIANFTDVATTFNGII 355
L NY EYSGAP+E++ YA+ ++ T + PDG + L+IGG IANFT+VA TF GI+
Sbjct: 301 LANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDG--KILIIGGSIANFTNVAATFKGIV 358
Query: 356 RALREKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLEVYGPEATMTGICKQA 415
RA+R+ + LK + IFVRRGGPNYQ GL M +G+ GIP+ V+G E MT I A
Sbjct: 359 RAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGIPIHVFGTETHMTAIVGMA 418
Query: 416 I 416
+
Sbjct: 419 L 419
>sp|P53585|ACLY_CAEEL Probable ATP-citrate synthase OS=Caenorhabditis elegans GN=D1005.1
PE=2 SV=1
Length = 1106
Score = 315 bits (806), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 181/437 (41%), Positives = 262/437 (59%), Gaps = 27/437 (6%)
Query: 1 MARKKIREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLS-SSRLVVKP 59
M+ K + E K +L ++ + +GL + V +F E+ NK WL+ ++ V+KP
Sbjct: 1 MSAKAVSELSGKEVLYKYFEP-SGLLSAPHAFHVKAGENFDEIANKYEWLARDNKGVIKP 59
Query: 60 DMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQ--EY 117
D L +RGK GLV + A F K + V +G +G + TFIVEPF H + E
Sbjct: 60 DQLIKRRGKLGLVKIGTPQELKAWFEKTG-DSYVRVGQTEGRLHTFIVEPFCAHTEKDEM 118
Query: 118 YLSIVSDRLGCTISFSECGGIEIEENWDKVKTIFLPTEKHMTLDACAPL---IATL--PL 172
Y++I S+R I F E GG++I + +K +T+ +P + + +A P + TL PL
Sbjct: 119 YIAIYSERFRDVIMFYEQGGVDIGDVEEKARTVSVPVQ--LNENAMTPSDEELTTLLGPL 176
Query: 173 EFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWA- 231
+ + F++ ++ ++DL F+++E+NPF L+N + + LD+ LD+TA F KW
Sbjct: 177 KDSDIVRRFVVELYKAYKDLHFTYLEINPFVLLNNQIHVLDLAARLDETANFLCADKWKS 236
Query: 232 ---------NIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGAS 282
++EFP PFGR L+S E +I +D KT ASLK T+LN KGR+WTMVAGGGAS
Sbjct: 237 RLTPYGGPNHVEFPAPFGRDLTSEEQYISEMDAKTGASLKLTILNRKGRVWTMVAGGGAS 296
Query: 283 VIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDC---ATADPDGRKRALLIGG 339
V++ DTV DLG ASEL NY EYSG P+E + +YA+ ++ T PDG + L+IGG
Sbjct: 297 VVFTDTVCDLGGASELANYGEYSGDPSESQTYEYAKTLLSVMTEGTPRPDG--KVLIIGG 354
Query: 340 GIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPL 399
IANFT+VA TF GI+RA SKLK ++ IFVRRGGPNYQ GL +++ +L +P+
Sbjct: 355 SIANFTNVAKTFGGIVRAFETFVSKLKEHKVTIFVRRGGPNYQEGLRRIKDAATKLELPI 414
Query: 400 EVYGPEATMTGICKQAI 416
V+GPE MT I A+
Sbjct: 415 HVFGPETHMTAIVGAAL 431
>sp|O13907|ACL2_SCHPO Probable ATP-citrate synthase subunit 2 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC22A12.16 PE=1
SV=1
Length = 492
Score = 311 bits (796), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 179/476 (37%), Positives = 260/476 (54%), Gaps = 64/476 (13%)
Query: 1 MARKKIREYDSKRLLKEHLKRLAGLD------------LQICSAQV--------TESTDF 40
M+ K IREYD K +L L R + +Q+ Q EST +
Sbjct: 1 MSAKSIREYDGKAVLAYWLNRSPSISKEEYKTVSATPAVQLAQIQFPLPTLVIPAESTTY 60
Query: 41 SELT--------NKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTE 92
E+ + PW+ ++LV KPD L +RGKSGL+ LN + E+++ R G
Sbjct: 61 REVVEDVFAKVEQEHPWVKETKLVAKPDQLIKRRGKSGLLKLNATWDEAKEWIRERAGKN 120
Query: 93 VEMGGCKGPITTFIVEPFVPH--NQEYYLSIVSDRLGCTISFSECGGIEIEENWDKVKTI 150
++ G +TTF+VEPFVPH N EYY++I S R G I F GG+++ + K + +
Sbjct: 121 QKVQHAVGYLTTFLVEPFVPHPPNTEYYININSVREGDWILFCNEGGVDVGDVDAKARKL 180
Query: 151 FLP---TEKHMTLDACAPLIATLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLV-- 205
+P +E + L++ +P+E + DFI+ +++V+ D F+++E+NP ++
Sbjct: 181 LVPVRLSEFPSRATIASTLLSDIPVEQHESLVDFIIRLYSVYVDCQFTYLEINPLVVIPT 240
Query: 206 --NGEPYPLDMRGELDDTAAFKNFKKWA--------------------------NIEFPL 237
+ + LD+ +LD TA F+ KWA + FP
Sbjct: 241 AKGADVFYLDLAAKLDQTAEFECGAKWAVARAPESLGIKTSGEESGAINADHGPPMVFPA 300
Query: 238 PFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASE 297
PFGR LS E+++ LD KT ASLK T+LN +GR+W +VAGGGASV+YAD V G A E
Sbjct: 301 PFGRELSKEEAYVQGLDAKTGASLKLTILNAEGRVWNLVAGGGASVVYADAVAVNGAADE 360
Query: 298 LGNYAEYSGAPNEEEVLQYARVVIDCAT-ADPDGRKRALLIGGGIANFTDVATTFNGIIR 356
L NY EYSGAP + + +YA+ V+D T +P + L IGGGIANFT A TF I R
Sbjct: 361 LANYGEYSGAPTDGQTYEYAKTVLDLMTRGEPRADGKVLFIGGGIANFTSPAVTFRAIAR 420
Query: 357 ALREKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLEVYGPEATMTGIC 412
AL + + KL A ++ I+VRR GPNYQ GL +R G++ +PL+VYGPE ++GI
Sbjct: 421 ALGDYKDKLHAHKVSIWVRRAGPNYQEGLRVIREAGKKFDLPLKVYGPECHISGIV 476
>sp|O67546|SUCC_AQUAE Succinyl-CoA ligase [ADP-forming] subunit beta OS=Aquifex aeolicus
(strain VF5) GN=sucC PE=3 SV=1
Length = 385
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 152/346 (43%), Gaps = 51/346 (14%)
Query: 55 LVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKG--PITTFIVEPFVP 112
LVVK + G RGK+G V + D+ ++ + V+ LG ++ C P+ ++E
Sbjct: 43 LVVKAQIHCGGRGKAGGVKIVKDMDELEKAVESLLGKVLKTFQCPDGKPVNRVLIEKATN 102
Query: 113 HNQEYYLSIVSDRLGC--TISFSECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATL 170
++EYYL+I DR I S GG+EIEE I + + ++ P + +
Sbjct: 103 IDKEYYLAITLDRSKSKPVIMASAAGGMEIEE-------IVKENPEAIIIETIDPELGLM 155
Query: 171 PLEFR----------GKIGDFIMGVFAVFQDLDFSFIEMNPFTLVN-GEPYPLDMRGELD 219
P + R + + ++ ++ DLD S +E+NP L G LD + ++D
Sbjct: 156 PYQARELAFKLNLPVKEFASIALKLYQIYSDLDASLVEINPLVLTKEGNLIALDAKLDID 215
Query: 220 DTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLD-EKTSASLKFTVLNPKGRIWTMVAG 278
D A F++ K +E E+ + L+ E L + LN G I MV G
Sbjct: 216 DNALFRH-KDLEEME-----------DETQLPQLEVEAKKYGLNYIKLN--GNIGCMVNG 261
Query: 279 GGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIG 338
G ++ D + G E N+ + G N E++ R+++ ADPD + + I
Sbjct: 262 AGLAMATMDIIKLAG--GEPANFLDVGGGANVEQIANAFRILM----ADPDVKAVFINIF 315
Query: 339 GGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTG 384
GGI +A G+I A SK+ R+ I R G N + G
Sbjct: 316 GGILRVDRLA---QGLIEA-----SKMVELRVPIVARLEGTNVEEG 353
>sp|Q57663|SUCC_METJA Succinyl-CoA ligase [ADP-forming] subunit beta
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=sucC PE=3
SV=1
Length = 364
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 180/427 (42%), Gaps = 97/427 (22%)
Query: 5 KIREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSS----SRLVVKPD 60
K+ EY++K + K++ V ES L +KE L+S +V+K
Sbjct: 2 KLHEYEAKNIFKKY------------GIPVPESF----LVSKEDDLNSINVDKEVVLKAQ 45
Query: 61 MLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKG-PITTFIVEPFVPHNQEYYL 119
+L G RGK+G + L + EF+K E+ KG + +VE +P +EYY+
Sbjct: 46 VLVGGRGKAGGI---LFASNKEEFIKK--AEELFNKEVKGEKVEKILVEEKLPIEKEYYV 100
Query: 120 SIVSDRLGCT--ISFSECGGIEIEENWDK-----------VKTIFLPTEKHMTLDACAPL 166
SI+ DR I FS GG++IEE +K V+ FLP +
Sbjct: 101 SIIIDRDAKKPLIIFSTEGGVDIEEVAEKNPEKIIKYHIDVRKPFLPYIARWIVKE---- 156
Query: 167 IATLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFK 225
A LP GK+ D I ++ +F++LD + +E+NP + +G Y D LDD AAF+
Sbjct: 157 -AKLPSNEIGKVADVIYKLYKIFKELDATMVEINPLVITKDGNVYAADAVLHLDDDAAFR 215
Query: 226 N----FKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGA 281
+ F+++ N E LPF V LD G + + G G
Sbjct: 216 HNYEEFEEYKNKE-KLPFAYV---------ELD---------------GDVAVIGNGAGL 250
Query: 282 SVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIG--G 339
++ D + +LG + + G + E V R V++ + + I G
Sbjct: 251 TLASMDIINNLGRKP--ACFLDIGGGADAETVKLALRKVLENKNV------KGIFINILG 302
Query: 340 GIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPL 399
GI +VA GI+ L+E + A RM G N + G R + EE GIP
Sbjct: 303 GITRCDEVAK---GIVEVLKEHPNVKFAVRMM------GTNEEIG----RKILEEHGIPY 349
Query: 400 EVYGPEA 406
E EA
Sbjct: 350 ETSMEEA 356
>sp|B4U901|SUCC_HYDS0 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Hydrogenobaculum
sp. (strain Y04AAS1) GN=sucC PE=3 SV=1
Length = 382
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 182/418 (43%), Gaps = 76/418 (18%)
Query: 5 KIREYDSKRLLKEHLKRLAGLDLQ--ICSAQVTESTDFSELTNKEPWLSSSRLVVKPDML 62
K+ E+ SK LLK++ GL + + V E+ + ++ P LVVK +
Sbjct: 2 KLHEHQSKELLKKY-----GLPVPEGYAAFNVKEAKEAAQALGGYP------LVVKAQIH 50
Query: 63 FGKRGKSG---LVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQEYYL 119
G RGK+G +V + +L +E + G++ V+ K ++ ++E P +E+YL
Sbjct: 51 CGARGKAGGVKIVKSDEELEAFSEAILGKILKTVQCPNGK-VVSRLLIEKATPIEKEFYL 109
Query: 120 SIVSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEK--HMTLDACAPLIATLPLEFR 175
SI DR I S+ GG+EIEE L EK + + P++ +P + R
Sbjct: 110 SITLDRSNSKILIMASKEGGMEIEE---------LSKEKPDAIIKEYVDPVLGIMPYQTR 160
Query: 176 ----------GKIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAF 224
G + ++ + DLD S +E+NP L +G+ LD + E+DD AAF
Sbjct: 161 KLSFALGLNPSLFGKIVSKLYQAYMDLDASLLEINPLVLTKDGDIVLLDAKVEIDDNAAF 220
Query: 225 --KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGAS 282
K+ ++ +I P E + + +G I MV G G +
Sbjct: 221 RHKDIEELEDITQIDPL---------------EVEAKKYGLNYIKLEGNIGCMVNGAGLA 265
Query: 283 VIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIA 342
+ D + G A N+ + G + E++ R++ T+D + + + I GGI
Sbjct: 266 MTTMDIIKLAGGAP--ANFLDVGGGASVEQIANAFRIL----TSDENVKAVFINIFGGIL 319
Query: 343 NFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLE 400
+A NG+I A +K+ ++ + VR G N + G R L +E G+ E
Sbjct: 320 RCDRLA---NGLIEA-----AKIVNIKIPVVVRLEGTNVEEG----RKLLKESGLNFE 365
>sp|A9KBQ4|SUCC_COXBN Succinyl-CoA ligase [ADP-forming] subunit beta OS=Coxiella burnetii
(strain Dugway 5J108-111) GN=sucC PE=3 SV=1
Length = 390
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 173/403 (42%), Gaps = 63/403 (15%)
Query: 6 IREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPDMLFGK 65
+ EY SK LLK++ ++ + +++V + D + + + R VVK + G
Sbjct: 3 LHEYQSKHLLKKY-------NIPVPASEVVFNPDAA--VDAAAKIGGDRWVVKAQVHAGG 53
Query: 66 RGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGCKGPITTFIVEPFVPHNQEYYLSIV 122
RGK+G V L + ++ VK LGT + + P+ +VE +E YL V
Sbjct: 54 RGKAGGVRLVKNKEELKSAVKALLGTRLVTYQTDERGQPVNQILVEQTSDIARELYLGAV 113
Query: 123 SDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFRG---- 176
DR I F S GG+EIE+ +K L +T+D P I P + R
Sbjct: 114 IDRASQRIVFMASTEGGVEIEKVAEKSPEKIL----KVTVD---PAIGLQPFQCRQLFFG 166
Query: 177 ----------KIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFK 225
D +MG++ +F + D S +E+NP + +GE LD + +DD+A ++
Sbjct: 167 LGLQDLKQMRSFTDIVMGLYRLFTERDLSLLEINPLVITGSGELICLDAKINIDDSALYR 226
Query: 226 NFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIY 285
+ + +T+ H E + + + G I MV G G ++
Sbjct: 227 QSE----------LREMRDTTQEDEH---ETMAQQWELNYIKLDGNIGCMVNGAGLAMAT 273
Query: 286 ADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFT 345
D + G + N+ + G+ +E V + R+++ +D + + + I GGI
Sbjct: 274 MDLIKLSG--GDPANFLDVGGSATKERVTEAFRIIV----SDKNVKGILVNIFGGIVRCD 327
Query: 346 DVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKM 388
+A +GII A++E + + VR G N Q G K+
Sbjct: 328 LIA---DGIISAVKE-----VGIDVPVVVRLEGNNAQLGAKKL 362
>sp|Q49X32|SUCC_STAS1 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305 /
DSM 20229) GN=sucC PE=3 SV=1
Length = 388
Score = 82.4 bits (202), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 168/397 (42%), Gaps = 54/397 (13%)
Query: 42 ELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGC 98
E K L S VVK + G RGK+G V + L++V + K LG + + G
Sbjct: 30 EAVEKAKELDSKVYVVKAQIHAGGRGKAGGVKIAKSLSEVETYAKELLGKTLVTHQTGPE 89
Query: 99 KGPITTFIVEPFVPHNQEYYLSIVSDRLG--CTISFSECGGIEIEENWDKV-KTIFLPTE 155
I +E +EYY+ V DR T+ SE GG EIEE K + IF T
Sbjct: 90 GKEIKRLYIEEGCDIQKEYYVGFVIDRATDRVTLMASEEGGTEIEEVAAKTPEKIFKETI 149
Query: 156 KHMTLDACAPLIA-------TLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPF-TLVNG 207
+ AP A +P E K F++ ++ VF + D S +E+NP T G
Sbjct: 150 DPVV--GLAPYQARRIAFNINIPKESINKAAKFLVSLYNVFIEKDCSIVEINPLVTTGEG 207
Query: 208 EPYPLDMRGELDDTAAF--KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTV 265
E LD + DD A F K+ ++ ++E P E + L +
Sbjct: 208 EVLALDAKVNFDDNALFKHKDIQELRDLEEEDP-------------KEIEASKYDLSYIA 254
Query: 266 LNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCAT 325
L+ G I MV G G ++ DT+ G N+ + G +E+V + ++++
Sbjct: 255 LD--GDIGCMVNGAGLAMATMDTINHFG--GNPANFLDVGGGATKEKVTEAFKIIL---- 306
Query: 326 ADPDGRKRALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGL 385
D + + + I GGI +A GI+ A++E E L + VR G N + G
Sbjct: 307 GDENVKGIFVNIFGGIMKCDIIA---EGIVAAVKEVELTLP-----LVVRLEGTNVERG- 357
Query: 386 AKMRALGEELGIPLEVYGPEATMTGICKQAIDCIMSA 422
+ + +E G+ +E P ATM ++ + + A
Sbjct: 358 ---KEILKESGLAIE---PAATMAEGAQKIVKLVKEA 388
>sp|A9N8R8|SUCC_COXBR Succinyl-CoA ligase [ADP-forming] subunit beta OS=Coxiella burnetii
(strain RSA 331 / Henzerling II) GN=sucC PE=3 SV=1
Length = 390
Score = 82.4 bits (202), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 173/403 (42%), Gaps = 63/403 (15%)
Query: 6 IREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPDMLFGK 65
+ EY SK LLK++ ++ + +++V + D + + + R VVK + G
Sbjct: 3 LHEYQSKHLLKKY-------NIPVPASEVVFNPDAA--VDAAAKIGGDRWVVKAQVHAGG 53
Query: 66 RGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGCKGPITTFIVEPFVPHNQEYYLSIV 122
RGK+G V L + ++ VK LGT + + P+ +VE +E YL V
Sbjct: 54 RGKAGGVRLVKNKEELKSAVKALLGTRLVTYQTDERGQPVNQILVEQTSDIARELYLGAV 113
Query: 123 SDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFRG---- 176
DR I F S GG+EIE+ +K L +T+D P I P + R
Sbjct: 114 IDRASQRIVFMASTEGGVEIEKVAEKSPEKIL----KVTID---PAIGLQPFQCRQLFFG 166
Query: 177 ----------KIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFK 225
D +MG++ +F + D S +E+NP + +GE LD + +DD+A ++
Sbjct: 167 LGLQDLKQMRSFTDIVMGLYRLFTERDLSLLEINPLVITGSGELICLDAKINIDDSALYR 226
Query: 226 NFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIY 285
+ + +T+ H E + + + G I MV G G ++
Sbjct: 227 QSE----------LREMRDTTQEDEH---ETMAQQWELNYIKLDGNIGCMVNGAGLAMAT 273
Query: 286 ADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFT 345
D + G + N+ + G+ +E V + ++++ +D + + + I GGI
Sbjct: 274 MDLIKLSG--GDPANFLDVGGSATKERVTEAFKIIV----SDKNVKGILVNIFGGIVRCD 327
Query: 346 DVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKM 388
+A +GII A++E + + VR G N Q G K+
Sbjct: 328 LIA---DGIISAVKE-----VGIDVPVVVRLEGNNAQLGAKKL 362
>sp|P53592|SUCC_COXBU Succinyl-CoA ligase [ADP-forming] subunit beta OS=Coxiella burnetii
(strain RSA 493 / Nine Mile phase I) GN=sucC PE=3 SV=2
Length = 390
Score = 82.0 bits (201), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 174/406 (42%), Gaps = 69/406 (16%)
Query: 6 IREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPDMLFGK 65
+ EY SK LLK++ ++ + +++V + D + + + R VVK + G
Sbjct: 3 LHEYQSKHLLKKY-------NIPVPASEVVFNPDAA--VDAAAKIGGDRWVVKAQVHAGG 53
Query: 66 RGKSGLVALNLDLAQVAEFVKGRLGTEV------EMGGCKGPITTFIVEPFVPHNQEYYL 119
RGK+G V L + ++ VK LGT + E G P+ +VE +E YL
Sbjct: 54 RGKAGGVRLVKNKEELKSAVKALLGTRLVTYQTDERGQ---PVNQILVEQTSDIARELYL 110
Query: 120 SIVSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFRG- 176
V DR I F S GG+EIE+ +K L +T+D P I P + R
Sbjct: 111 GAVIDRASQRIVFMASTEGGVEIEKVAEKSPEKIL----KVTID---PAIGLQPFQCRQL 163
Query: 177 -------------KIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTA 222
D +MG++ +F + D S +E+NP + +GE LD + +DD+A
Sbjct: 164 FFGLGLQDLKQMRSFTDIVMGLYRLFTERDLSLLEINPLVITGSGELICLDAKINIDDSA 223
Query: 223 AFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGAS 282
++ + + +T+ H E + + + G I MV G G +
Sbjct: 224 LYRQSE----------LREMRDTTQEDEH---ETMAQQWELNYIKLDGNIGCMVNGAGLA 270
Query: 283 VIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIA 342
+ D + G + N+ + G+ +E V + ++++ +D + + + I GGI
Sbjct: 271 MATMDLIKLSG--GDPANFLDVGGSATKERVTEAFKIIV----SDKNVKGILVNIFGGIV 324
Query: 343 NFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKM 388
+A +GII A++E + + VR G N Q G K+
Sbjct: 325 RCDLIA---DGIISAVKE-----VGIDVPVVVRLEGNNAQLGAKKL 362
>sp|B6J8N7|SUCC_COXB1 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Coxiella burnetii
(strain CbuK_Q154) GN=sucC PE=3 SV=1
Length = 390
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 172/403 (42%), Gaps = 63/403 (15%)
Query: 6 IREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPDMLFGK 65
+ EY SK LLK++ ++ + +++V + D + + + R VVK + G
Sbjct: 3 LHEYQSKHLLKKY-------NIPVPASEVVFNPDAA--VDAAAKIGGDRWVVKAQVHAGG 53
Query: 66 RGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGCKGPITTFIVEPFVPHNQEYYLSIV 122
RGK+G V L + ++ VK LGT + + P+ +VE +E YL V
Sbjct: 54 RGKAGGVRLVKNKEELKSAVKALLGTRLVTYQTDERGQPVNQILVEQTSDIARELYLGAV 113
Query: 123 SDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFRG---- 176
DR I F S GG+EIE+ +K L +T+D P I P + R
Sbjct: 114 IDRASQRIVFMASTEGGVEIEKVAEKSPEKIL----KVTVD---PAIGLQPFQCRQLFFG 166
Query: 177 ----------KIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFK 225
D +MG++ +F + D S +E+NP + +GE LD + +DD+A ++
Sbjct: 167 LGLQDLKQMRSFTDIVMGLYRLFTERDLSLLEINPLVITGSGELICLDAKINIDDSALYR 226
Query: 226 NFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIY 285
+ + +T+ H E + + + G I MV G G ++
Sbjct: 227 QSE----------LREMRDTTQEDEH---ETMAQQWELNYIKLDGNIGCMVNGAGLAMAT 273
Query: 286 ADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFT 345
D + G + N+ + G+ +E V + +++ +D + + + I GGI
Sbjct: 274 MDLIKLSG--GDPANFLDVGGSATKERVTEAFKII----ASDKNVKGILVNIFGGIVRCD 327
Query: 346 DVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKM 388
+A +GII A++E + + VR G N Q G K+
Sbjct: 328 LIA---DGIISAVKE-----VGIDVPVVVRLEGNNAQLGAKKL 362
>sp|Q8CPH5|SUCC_STAES Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=sucC PE=3 SV=1
Length = 388
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 169/402 (42%), Gaps = 64/402 (15%)
Query: 42 ELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGC 98
E K L+S VVK + G RGK+G V + L++V + LG ++ + G
Sbjct: 30 EAVEKAKELNSDVYVVKAQIHAGGRGKAGGVKIAKSLSEVETYANELLGKQLVTHQTGPE 89
Query: 99 KGPITTFIVEPFVPHNQEYYLSIVSDRL--GCTISFSECGGIEIEENWDKVKTIFLPTEK 156
+ +E +EYY+ V DR T+ SE GG EIEE + T +
Sbjct: 90 GKEVKRLYIEEGCDIQKEYYVGFVIDRATDKVTLMASEEGGTEIEE-------VAAQTPE 142
Query: 157 HMTLDACAPLIATLPLEFR-------------GKIGDFIMGVFAVFQDLDFSFIEMNPF- 202
+ + P++ P + R GK F++ ++ VF + D S +E+NP
Sbjct: 143 KIFKETIDPVVGLSPYQARRIAFNINIPKESVGKATKFLLALYNVFIEKDCSIVEINPLV 202
Query: 203 TLVNGEPYPLDMRGELDDTAAF--KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSAS 260
T +G+ LD + DD A F K+ + ++E P E +
Sbjct: 203 TTGDGQVLALDAKLNFDDNALFRHKDILELRDLEEEDP-------------KEIEASKYD 249
Query: 261 LKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVV 320
L + L+ G I MV G G ++ DT+ G N+ + G +E+V + +++
Sbjct: 250 LSYIALD--GDIGCMVNGAGLAMATMDTINHFG--GNPANFLDVGGGATKEKVTEAFKII 305
Query: 321 IDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPN 380
+ D + + + I GGI +A GI+ A++E E L + VR G N
Sbjct: 306 L----GDDNVKGIFVNIFGGIMKCDVIA---EGIVAAVKEVELTLP-----LVVRLEGTN 353
Query: 381 YQTGLAKMRALGEELGIPLEVYGPEATMTGICKQAIDCIMSA 422
+ G +A+ E G+ +E P ATM ++ + + A
Sbjct: 354 VERG----KAILNESGLAIE---PAATMAEGAQKIVKLVKEA 388
>sp|Q5HPU5|SUCC_STAEQ Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=sucC PE=3
SV=1
Length = 388
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 169/402 (42%), Gaps = 64/402 (15%)
Query: 42 ELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGC 98
E K L+S VVK + G RGK+G V + L++V + LG ++ + G
Sbjct: 30 EAVEKAKELNSDVYVVKAQIHAGGRGKAGGVKIAKSLSEVETYANELLGKQLVTHQTGPE 89
Query: 99 KGPITTFIVEPFVPHNQEYYLSIVSDRL--GCTISFSECGGIEIEENWDKVKTIFLPTEK 156
+ +E +EYY+ V DR T+ SE GG EIEE + T +
Sbjct: 90 GKEVKRLYIEEGCDIQKEYYVGFVIDRATDKVTLMASEEGGTEIEE-------VAAQTPE 142
Query: 157 HMTLDACAPLIATLPLEFR-------------GKIGDFIMGVFAVFQDLDFSFIEMNPF- 202
+ + P++ P + R GK F++ ++ VF + D S +E+NP
Sbjct: 143 KIFKETIDPVVGLSPYQARRIAFNINIPKESVGKATKFLLALYNVFIEKDCSIVEINPLV 202
Query: 203 TLVNGEPYPLDMRGELDDTAAF--KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSAS 260
T +G+ LD + DD A F K+ + ++E P E +
Sbjct: 203 TTGDGQVLALDAKLNFDDNALFRHKDILELRDLEEEDP-------------KEIEASKYD 249
Query: 261 LKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVV 320
L + L+ G I MV G G ++ DT+ G N+ + G +E+V + +++
Sbjct: 250 LSYIALD--GDIGCMVNGAGLAMATMDTINHFG--GNPANFLDVGGGATKEKVTEAFKII 305
Query: 321 IDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPN 380
+ D + + + I GGI +A GI+ A++E E L + VR G N
Sbjct: 306 L----GDDNVKGIFVNIFGGIMKCDVIA---EGIVAAVKEVELTLP-----LVVRLEGTN 353
Query: 381 YQTGLAKMRALGEELGIPLEVYGPEATMTGICKQAIDCIMSA 422
+ G +A+ E G+ +E P ATM ++ + + A
Sbjct: 354 VERG----KAILNESGLAIE---PAATMAEGAQKIVKLVKEA 388
>sp|Q6GHJ0|SUCC_STAAR Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
aureus (strain MRSA252) GN=sucC PE=3 SV=1
Length = 388
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 170/397 (42%), Gaps = 54/397 (13%)
Query: 42 ELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGC 98
E K L+S VVK + G RGK+G V + L++V + K LG + + G
Sbjct: 30 EAVEKAKELNSDVYVVKAQIHAGGRGKAGGVKITKSLSEVETYAKELLGKTLVTHQTGPE 89
Query: 99 KGPITTFIVEPFVPHNQEYYLSIVSDRL--GCTISFSECGGIEIEENWDKV-KTIFLPTE 155
I +E +EYY+ V DR T+ SE GG EIEE K + IF T
Sbjct: 90 GKEIKRLYIEEGCAIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETI 149
Query: 156 KHMTLDACAPLIA-------TLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPF-TLVNG 207
+ +P A +P E K F++ ++ VF + D S +E+NP T +G
Sbjct: 150 DPVI--GLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADG 207
Query: 208 EPYPLDMRGELDDTAAF--KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTV 265
+ LD + DD A F K+ + ++E P E+ H L +
Sbjct: 208 DVLALDAKINFDDNALFRHKDVVELRDLEEEDP-----KEIEASKH--------DLSYIA 254
Query: 266 LNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCAT 325
L+ G I MV G G ++ DT+ G N+ + G+ E+V + ++++
Sbjct: 255 LD--GDIGCMVNGAGLAMATMDTINHFG--GNPANFLDAGGSATREKVTEAFKIIL---- 306
Query: 326 ADPDGRKRALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGL 385
D + + + I GGI +A GI+ A++E + L + VR G N + G
Sbjct: 307 GDENVKGIFVNIFGGIMKCDVIA---EGIVEAVKEVDLTLP-----LVVRLEGTNVELG- 357
Query: 386 AKMRALGEELGIPLEVYGPEATMTGICKQAIDCIMSA 422
+ + ++ G+ +E P ATM ++ + + A
Sbjct: 358 ---KKILKDSGLAIE---PAATMAEGAQKIVKLVKEA 388
>sp|P66872|SUCC_STAAW Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
aureus (strain MW2) GN=sucC PE=3 SV=1
Length = 388
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 170/397 (42%), Gaps = 54/397 (13%)
Query: 42 ELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGC 98
E K L+S VVK + G RGK+G V + L++V + K LG + + G
Sbjct: 30 EAVEKAKELNSDVYVVKAQIHAGGRGKAGGVKIAKSLSEVETYAKELLGKTLVTHQTGPE 89
Query: 99 KGPITTFIVEPFVPHNQEYYLSIVSDRL--GCTISFSECGGIEIEENWDKV-KTIFLPTE 155
I +E +EYY+ V DR T+ SE GG EIEE K + IF T
Sbjct: 90 GKEIKRLYIEEGCAIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETI 149
Query: 156 KHMTLDACAPLIA-------TLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPF-TLVNG 207
+ +P A +P E K F++ ++ VF + D S +E+NP T +G
Sbjct: 150 DPVI--GLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADG 207
Query: 208 EPYPLDMRGELDDTAAF--KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTV 265
+ LD + DD A F K+ + ++E P E+ H L +
Sbjct: 208 DVLALDAKINFDDNALFRHKDVVELRDLEEEDP-----KEIEASKH--------DLSYIA 254
Query: 266 LNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCAT 325
L+ G I MV G G ++ DT+ G N+ + G+ E+V + ++++
Sbjct: 255 LD--GDIGCMVNGAGLAMATMDTINHFG--GNPANFLDAGGSATREKVTEAFKIIL---- 306
Query: 326 ADPDGRKRALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGL 385
D + + + I GGI +A GI+ A++E + L + VR G N + G
Sbjct: 307 GDENVKGIFVNIFGGIMKCDVIA---EGIVEAVKEVDLTLP-----LVVRLEGTNVELG- 357
Query: 386 AKMRALGEELGIPLEVYGPEATMTGICKQAIDCIMSA 422
+ + ++ G+ +E P ATM ++ + + A
Sbjct: 358 ---KKILKDSGLAIE---PAATMAEGAQKIVKLVKEA 388
>sp|A8Z3S5|SUCC_STAAT Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
aureus (strain USA300 / TCH1516) GN=sucC PE=3 SV=1
Length = 388
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 170/397 (42%), Gaps = 54/397 (13%)
Query: 42 ELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGC 98
E K L+S VVK + G RGK+G V + L++V + K LG + + G
Sbjct: 30 EAVEKAKELNSDVYVVKAQIHAGGRGKAGGVKIAKSLSEVETYAKELLGKTLVTHQTGPE 89
Query: 99 KGPITTFIVEPFVPHNQEYYLSIVSDRL--GCTISFSECGGIEIEENWDKV-KTIFLPTE 155
I +E +EYY+ V DR T+ SE GG EIEE K + IF T
Sbjct: 90 GKEIKRLYIEEGCAIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETI 149
Query: 156 KHMTLDACAPLIA-------TLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPF-TLVNG 207
+ +P A +P E K F++ ++ VF + D S +E+NP T +G
Sbjct: 150 DPVI--GLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADG 207
Query: 208 EPYPLDMRGELDDTAAF--KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTV 265
+ LD + DD A F K+ + ++E P E+ H L +
Sbjct: 208 DVLALDAKINFDDNALFRHKDVVELRDLEEEDP-----KEIEASKH--------DLSYIA 254
Query: 266 LNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCAT 325
L+ G I MV G G ++ DT+ G N+ + G+ E+V + ++++
Sbjct: 255 LD--GDIGCMVNGAGLAMATMDTINHFG--GNPANFLDAGGSATREKVTEAFKIIL---- 306
Query: 326 ADPDGRKRALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGL 385
D + + + I GGI +A GI+ A++E + L + VR G N + G
Sbjct: 307 GDENVKGIFVNIFGGIMKCDVIA---EGIVEAVKEVDLTLP-----LVVRLEGTNVELG- 357
Query: 386 AKMRALGEELGIPLEVYGPEATMTGICKQAIDCIMSA 422
+ + ++ G+ +E P ATM ++ + + A
Sbjct: 358 ---KKILKDSGLAIE---PAATMAEGAQKIVKLVKEA 388
>sp|Q6G9W8|SUCC_STAAS Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
aureus (strain MSSA476) GN=sucC PE=3 SV=1
Length = 388
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 170/397 (42%), Gaps = 54/397 (13%)
Query: 42 ELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGC 98
E K L+S VVK + G RGK+G V + L++V + K LG + + G
Sbjct: 30 EAVEKAKELNSDVYVVKAQIHAGGRGKAGGVKIAKSLSEVETYAKELLGKTLVTHQTGPE 89
Query: 99 KGPITTFIVEPFVPHNQEYYLSIVSDRL--GCTISFSECGGIEIEENWDKV-KTIFLPTE 155
I +E +EYY+ V DR T+ SE GG EIEE K + IF T
Sbjct: 90 GKEIKRLYIEEGCAIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETI 149
Query: 156 KHMTLDACAPLIA-------TLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPF-TLVNG 207
+ +P A +P E K F++ ++ VF + D S +E+NP T +G
Sbjct: 150 DPVI--GLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADG 207
Query: 208 EPYPLDMRGELDDTAAF--KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTV 265
+ LD + DD A F K+ + ++E P E+ H L +
Sbjct: 208 DVLALDAKINFDDNALFRHKDVVELRDLEEEDP-----KEIEASKH--------DLSYIA 254
Query: 266 LNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCAT 325
L+ G I MV G G ++ DT+ G N+ + G+ E+V + ++++
Sbjct: 255 LD--GDIGCMVNGAGLAMATMDTINHFG--GNPANFLDAGGSATREKVTEAFKIIL---- 306
Query: 326 ADPDGRKRALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGL 385
D + + + I GGI +A GI+ A++E + L + VR G N + G
Sbjct: 307 GDENVKGIFVNIFGGIMKCDVIA---EGIVEAVKEVDLTLP-----LVVRLEGTNVELG- 357
Query: 386 AKMRALGEELGIPLEVYGPEATMTGICKQAIDCIMSA 422
+ + ++ G+ +E P ATM ++ + + A
Sbjct: 358 ---KKILKDSGLAIE---PAATMAEGAQKIVKLVKEA 388
>sp|P99071|SUCC_STAAN Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
aureus (strain N315) GN=sucC PE=1 SV=1
Length = 388
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 170/397 (42%), Gaps = 54/397 (13%)
Query: 42 ELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGC 98
E K L+S VVK + G RGK+G V + L++V + K LG + + G
Sbjct: 30 EAVEKAKELNSDVYVVKAQIHAGGRGKAGGVKIAKSLSEVETYAKELLGKTLVTHQTGPE 89
Query: 99 KGPITTFIVEPFVPHNQEYYLSIVSDRL--GCTISFSECGGIEIEENWDKV-KTIFLPTE 155
I +E +EYY+ V DR T+ SE GG EIEE K + IF T
Sbjct: 90 GKEIKRLYIEEGCAIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETI 149
Query: 156 KHMTLDACAPLIA-------TLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPF-TLVNG 207
+ +P A +P E K F++ ++ VF + D S +E+NP T +G
Sbjct: 150 DPVI--GLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADG 207
Query: 208 EPYPLDMRGELDDTAAF--KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTV 265
+ LD + DD A F K+ + ++E P E+ H L +
Sbjct: 208 DVLALDAKINFDDNALFRHKDVVELRDLEEEDP-----KEIEASKH--------DLSYIA 254
Query: 266 LNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCAT 325
L+ G I MV G G ++ DT+ G N+ + G+ E+V + ++++
Sbjct: 255 LD--GDIGCMVNGAGLAMATMDTINHFG--GNPANFLDAGGSATREKVTEAFKIIL---- 306
Query: 326 ADPDGRKRALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGL 385
D + + + I GGI +A GI+ A++E + L + VR G N + G
Sbjct: 307 GDENVKGIFVNIFGGIMKCDVIA---EGIVEAVKEVDLTLP-----LVVRLEGTNVELG- 357
Query: 386 AKMRALGEELGIPLEVYGPEATMTGICKQAIDCIMSA 422
+ + ++ G+ +E P ATM ++ + + A
Sbjct: 358 ---KKILKDSGLAIE---PAATMAEGAQKIVKLVKEA 388
>sp|P66871|SUCC_STAAM Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
aureus (strain Mu50 / ATCC 700699) GN=sucC PE=1 SV=1
Length = 388
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 170/397 (42%), Gaps = 54/397 (13%)
Query: 42 ELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGC 98
E K L+S VVK + G RGK+G V + L++V + K LG + + G
Sbjct: 30 EAVEKAKELNSDVYVVKAQIHAGGRGKAGGVKIAKSLSEVETYAKELLGKTLVTHQTGPE 89
Query: 99 KGPITTFIVEPFVPHNQEYYLSIVSDRL--GCTISFSECGGIEIEENWDKV-KTIFLPTE 155
I +E +EYY+ V DR T+ SE GG EIEE K + IF T
Sbjct: 90 GKEIKRLYIEEGCAIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETI 149
Query: 156 KHMTLDACAPLIA-------TLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPF-TLVNG 207
+ +P A +P E K F++ ++ VF + D S +E+NP T +G
Sbjct: 150 DPVI--GLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADG 207
Query: 208 EPYPLDMRGELDDTAAF--KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTV 265
+ LD + DD A F K+ + ++E P E+ H L +
Sbjct: 208 DVLALDAKINFDDNALFRHKDVVELRDLEEEDP-----KEIEASKH--------DLSYIA 254
Query: 266 LNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCAT 325
L+ G I MV G G ++ DT+ G N+ + G+ E+V + ++++
Sbjct: 255 LD--GDIGCMVNGAGLAMATMDTINHFG--GNPANFLDAGGSATREKVTEAFKIIL---- 306
Query: 326 ADPDGRKRALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGL 385
D + + + I GGI +A GI+ A++E + L + VR G N + G
Sbjct: 307 GDENVKGIFVNIFGGIMKCDVIA---EGIVEAVKEVDLTLP-----LVVRLEGTNVELG- 357
Query: 386 AKMRALGEELGIPLEVYGPEATMTGICKQAIDCIMSA 422
+ + ++ G+ +E P ATM ++ + + A
Sbjct: 358 ---KKILKDSGLAIE---PAATMAEGAQKIVKLVKEA 388
>sp|A6QGE5|SUCC_STAAE Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
aureus (strain Newman) GN=sucC PE=3 SV=1
Length = 388
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 170/397 (42%), Gaps = 54/397 (13%)
Query: 42 ELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGC 98
E K L+S VVK + G RGK+G V + L++V + K LG + + G
Sbjct: 30 EAVEKAKELNSDVYVVKAQIHAGGRGKAGGVKIAKSLSEVETYAKELLGKTLVTHQTGPE 89
Query: 99 KGPITTFIVEPFVPHNQEYYLSIVSDRL--GCTISFSECGGIEIEENWDKV-KTIFLPTE 155
I +E +EYY+ V DR T+ SE GG EIEE K + IF T
Sbjct: 90 GKEIKRLYIEEGCAIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETI 149
Query: 156 KHMTLDACAPLIA-------TLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPF-TLVNG 207
+ +P A +P E K F++ ++ VF + D S +E+NP T +G
Sbjct: 150 DPVI--GLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADG 207
Query: 208 EPYPLDMRGELDDTAAF--KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTV 265
+ LD + DD A F K+ + ++E P E+ H L +
Sbjct: 208 DVLALDAKINFDDNALFRHKDVVELRDLEEEDP-----KEIEASKH--------DLSYIA 254
Query: 266 LNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCAT 325
L+ G I MV G G ++ DT+ G N+ + G+ E+V + ++++
Sbjct: 255 LD--GDIGCMVNGAGLAMATMDTINHFG--GNPANFLDAGGSATREKVTEAFKIIL---- 306
Query: 326 ADPDGRKRALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGL 385
D + + + I GGI +A GI+ A++E + L + VR G N + G
Sbjct: 307 GDENVKGIFVNIFGGIMKCDVIA---EGIVEAVKEVDLTLP-----LVVRLEGTNVELG- 357
Query: 386 AKMRALGEELGIPLEVYGPEATMTGICKQAIDCIMSA 422
+ + ++ G+ +E P ATM ++ + + A
Sbjct: 358 ---KKILKDSGLAIE---PAATMAEGAQKIVKLVKEA 388
>sp|Q5HGI7|SUCC_STAAC Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
aureus (strain COL) GN=sucC PE=3 SV=1
Length = 388
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 170/397 (42%), Gaps = 54/397 (13%)
Query: 42 ELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGC 98
E K L+S VVK + G RGK+G V + L++V + K LG + + G
Sbjct: 30 EAVEKAKELNSDVYVVKAQIHAGGRGKAGGVKIAKSLSEVETYAKELLGKTLVTHQTGPE 89
Query: 99 KGPITTFIVEPFVPHNQEYYLSIVSDRL--GCTISFSECGGIEIEENWDKV-KTIFLPTE 155
I +E +EYY+ V DR T+ SE GG EIEE K + IF T
Sbjct: 90 GKEIKRLYIEEGCAIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETI 149
Query: 156 KHMTLDACAPLIA-------TLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPF-TLVNG 207
+ +P A +P E K F++ ++ VF + D S +E+NP T +G
Sbjct: 150 DPVI--GLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADG 207
Query: 208 EPYPLDMRGELDDTAAF--KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTV 265
+ LD + DD A F K+ + ++E P E+ H L +
Sbjct: 208 DVLALDAKINFDDNALFRHKDVVELRDLEEEDP-----KEIEASKH--------DLSYIA 254
Query: 266 LNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCAT 325
L+ G I MV G G ++ DT+ G N+ + G+ E+V + ++++
Sbjct: 255 LD--GDIGCMVNGAGLAMATMDTINHFG--GNPANFLDAGGSATREKVTEAFKIIL---- 306
Query: 326 ADPDGRKRALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGL 385
D + + + I GGI +A GI+ A++E + L + VR G N + G
Sbjct: 307 GDENVKGIFVNIFGGIMKCDVIA---EGIVEAVKEVDLTLP-----LVVRLEGTNVELG- 357
Query: 386 AKMRALGEELGIPLEVYGPEATMTGICKQAIDCIMSA 422
+ + ++ G+ +E P ATM ++ + + A
Sbjct: 358 ---KKILKDSGLAIE---PAATMAEGAQKIVKLVKEA 388
>sp|A5ISD0|SUCC_STAA9 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
aureus (strain JH9) GN=sucC PE=3 SV=1
Length = 388
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 170/397 (42%), Gaps = 54/397 (13%)
Query: 42 ELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGC 98
E K L+S VVK + G RGK+G V + L++V + K LG + + G
Sbjct: 30 EAVEKAKELNSDVYVVKAQIHAGGRGKAGGVKIAKSLSEVETYAKELLGKTLVTHQTGPE 89
Query: 99 KGPITTFIVEPFVPHNQEYYLSIVSDRL--GCTISFSECGGIEIEENWDKV-KTIFLPTE 155
I +E +EYY+ V DR T+ SE GG EIEE K + IF T
Sbjct: 90 GKEIKRLYIEEGCAIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETI 149
Query: 156 KHMTLDACAPLIA-------TLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPF-TLVNG 207
+ +P A +P E K F++ ++ VF + D S +E+NP T +G
Sbjct: 150 DPVI--GLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADG 207
Query: 208 EPYPLDMRGELDDTAAF--KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTV 265
+ LD + DD A F K+ + ++E P E+ H L +
Sbjct: 208 DVLALDAKINFDDNALFRHKDVVELRDLEEEDP-----KEIEASKH--------DLSYIA 254
Query: 266 LNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCAT 325
L+ G I MV G G ++ DT+ G N+ + G+ E+V + ++++
Sbjct: 255 LD--GDIGCMVNGAGLAMATMDTINHFG--GNPANFLDAGGSATREKVTEAFKIIL---- 306
Query: 326 ADPDGRKRALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGL 385
D + + + I GGI +A GI+ A++E + L + VR G N + G
Sbjct: 307 GDENVKGIFVNIFGGIMKCDVIA---EGIVEAVKEVDLTLP-----LVVRLEGTNVELG- 357
Query: 386 AKMRALGEELGIPLEVYGPEATMTGICKQAIDCIMSA 422
+ + ++ G+ +E P ATM ++ + + A
Sbjct: 358 ---KKILKDSGLAIE---PAATMAEGAQKIVKLVKEA 388
>sp|Q2FZ37|SUCC_STAA8 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
aureus (strain NCTC 8325) GN=sucC PE=3 SV=1
Length = 388
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 170/397 (42%), Gaps = 54/397 (13%)
Query: 42 ELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGC 98
E K L+S VVK + G RGK+G V + L++V + K LG + + G
Sbjct: 30 EAVEKAKELNSDVYVVKAQIHAGGRGKAGGVKIAKSLSEVETYAKELLGKTLVTHQTGPE 89
Query: 99 KGPITTFIVEPFVPHNQEYYLSIVSDRL--GCTISFSECGGIEIEENWDKV-KTIFLPTE 155
I +E +EYY+ V DR T+ SE GG EIEE K + IF T
Sbjct: 90 GKEIKRLYIEEGCAIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETI 149
Query: 156 KHMTLDACAPLIA-------TLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPF-TLVNG 207
+ +P A +P E K F++ ++ VF + D S +E+NP T +G
Sbjct: 150 DPVI--GLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADG 207
Query: 208 EPYPLDMRGELDDTAAF--KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTV 265
+ LD + DD A F K+ + ++E P E+ H L +
Sbjct: 208 DVLALDAKINFDDNALFRHKDVVELRDLEEEDP-----KEIEASKH--------DLSYIA 254
Query: 266 LNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCAT 325
L+ G I MV G G ++ DT+ G N+ + G+ E+V + ++++
Sbjct: 255 LD--GDIGCMVNGAGLAMATMDTINHFG--GNPANFLDAGGSATREKVTEAFKIIL---- 306
Query: 326 ADPDGRKRALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGL 385
D + + + I GGI +A GI+ A++E + L + VR G N + G
Sbjct: 307 GDENVKGIFVNIFGGIMKCDVIA---EGIVEAVKEVDLTLP-----LVVRLEGTNVELG- 357
Query: 386 AKMRALGEELGIPLEVYGPEATMTGICKQAIDCIMSA 422
+ + ++ G+ +E P ATM ++ + + A
Sbjct: 358 ---KKILKDSGLAIE---PAATMAEGAQKIVKLVKEA 388
>sp|Q2FHJ3|SUCC_STAA3 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
aureus (strain USA300) GN=sucC PE=3 SV=1
Length = 388
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 170/397 (42%), Gaps = 54/397 (13%)
Query: 42 ELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGC 98
E K L+S VVK + G RGK+G V + L++V + K LG + + G
Sbjct: 30 EAVEKAKELNSDVYVVKAQIHAGGRGKAGGVKIAKSLSEVETYAKELLGKTLVTHQTGPE 89
Query: 99 KGPITTFIVEPFVPHNQEYYLSIVSDRL--GCTISFSECGGIEIEENWDKV-KTIFLPTE 155
I +E +EYY+ V DR T+ SE GG EIEE K + IF T
Sbjct: 90 GKEIKRLYIEEGCAIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETI 149
Query: 156 KHMTLDACAPLIA-------TLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPF-TLVNG 207
+ +P A +P E K F++ ++ VF + D S +E+NP T +G
Sbjct: 150 DPVI--GLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADG 207
Query: 208 EPYPLDMRGELDDTAAF--KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTV 265
+ LD + DD A F K+ + ++E P E+ H L +
Sbjct: 208 DVLALDAKINFDDNALFRHKDVVELRDLEEEDP-----KEIEASKH--------DLSYIA 254
Query: 266 LNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCAT 325
L+ G I MV G G ++ DT+ G N+ + G+ E+V + ++++
Sbjct: 255 LD--GDIGCMVNGAGLAMATMDTINHFG--GNPANFLDAGGSATREKVTEAFKIIL---- 306
Query: 326 ADPDGRKRALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGL 385
D + + + I GGI +A GI+ A++E + L + VR G N + G
Sbjct: 307 GDENVKGIFVNIFGGIMKCDVIA---EGIVEAVKEVDLTLP-----LVVRLEGTNVELG- 357
Query: 386 AKMRALGEELGIPLEVYGPEATMTGICKQAIDCIMSA 422
+ + ++ G+ +E P ATM ++ + + A
Sbjct: 358 ---KKILKDSGLAIE---PAATMAEGAQKIVKLVKEA 388
>sp|A6U164|SUCC_STAA2 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
aureus (strain JH1) GN=sucC PE=3 SV=1
Length = 388
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 170/397 (42%), Gaps = 54/397 (13%)
Query: 42 ELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGC 98
E K L+S VVK + G RGK+G V + L++V + K LG + + G
Sbjct: 30 EAVEKAKELNSDVYVVKAQIHAGGRGKAGGVKIAKSLSEVETYAKELLGKTLVTHQTGPE 89
Query: 99 KGPITTFIVEPFVPHNQEYYLSIVSDRL--GCTISFSECGGIEIEENWDKV-KTIFLPTE 155
I +E +EYY+ V DR T+ SE GG EIEE K + IF T
Sbjct: 90 GKEIKRLYIEEGCAIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETI 149
Query: 156 KHMTLDACAPLIA-------TLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPF-TLVNG 207
+ +P A +P E K F++ ++ VF + D S +E+NP T +G
Sbjct: 150 DPVI--GLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADG 207
Query: 208 EPYPLDMRGELDDTAAF--KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTV 265
+ LD + DD A F K+ + ++E P E+ H L +
Sbjct: 208 DVLALDAKINFDDNALFRHKDVVELRDLEEEDP-----KEIEASKH--------DLSYIA 254
Query: 266 LNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCAT 325
L+ G I MV G G ++ DT+ G N+ + G+ E+V + ++++
Sbjct: 255 LD--GDIGCMVNGAGLAMATMDTINHFG--GNPANFLDAGGSATREKVTEAFKIIL---- 306
Query: 326 ADPDGRKRALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGL 385
D + + + I GGI +A GI+ A++E + L + VR G N + G
Sbjct: 307 GDENVKGIFVNIFGGIMKCDVIA---EGIVEAVKEVDLTLP-----LVVRLEGTNVELG- 357
Query: 386 AKMRALGEELGIPLEVYGPEATMTGICKQAIDCIMSA 422
+ + ++ G+ +E P ATM ++ + + A
Sbjct: 358 ---KKILKDSGLAIE---PAATMAEGAQKIVKLVKEA 388
>sp|A7X1L8|SUCC_STAA1 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
aureus (strain Mu3 / ATCC 700698) GN=sucC PE=3 SV=1
Length = 388
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 170/397 (42%), Gaps = 54/397 (13%)
Query: 42 ELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGC 98
E K L+S VVK + G RGK+G V + L++V + K LG + + G
Sbjct: 30 EAVEKAKELNSDVYVVKAQIHAGGRGKAGGVKIAKSLSEVETYAKELLGKTLVTHQTGPE 89
Query: 99 KGPITTFIVEPFVPHNQEYYLSIVSDRL--GCTISFSECGGIEIEENWDKV-KTIFLPTE 155
I +E +EYY+ V DR T+ SE GG EIEE K + IF T
Sbjct: 90 GKEIKRLYIEEGCAIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETI 149
Query: 156 KHMTLDACAPLIA-------TLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPF-TLVNG 207
+ +P A +P E K F++ ++ VF + D S +E+NP T +G
Sbjct: 150 DPVI--GLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADG 207
Query: 208 EPYPLDMRGELDDTAAF--KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTV 265
+ LD + DD A F K+ + ++E P E+ H L +
Sbjct: 208 DVLALDAKINFDDNALFRHKDVVELRDLEEEDP-----KEIEASKH--------DLSYIA 254
Query: 266 LNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCAT 325
L+ G I MV G G ++ DT+ G N+ + G+ E+V + ++++
Sbjct: 255 LD--GDIGCMVNGAGLAMATMDTINHFG--GNPANFLDAGGSATREKVTEAFKIIL---- 306
Query: 326 ADPDGRKRALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGL 385
D + + + I GGI +A GI+ A++E + L + VR G N + G
Sbjct: 307 GDENVKGIFVNIFGGIMKCDVIA---EGIVEAVKEVDLTLP-----LVVRLEGTNVELG- 357
Query: 386 AKMRALGEELGIPLEVYGPEATMTGICKQAIDCIMSA 422
+ + ++ G+ +E P ATM ++ + + A
Sbjct: 358 ---KKILKDSGLAIE---PAATMAEGAQKIVKLVKEA 388
>sp|B6IZ97|SUCC_COXB2 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Coxiella burnetii
(strain CbuG_Q212) GN=sucC PE=3 SV=1
Length = 390
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 172/403 (42%), Gaps = 63/403 (15%)
Query: 6 IREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPDMLFGK 65
+ EY SK LLK++ ++ + +++V + D + + + R VVK + G
Sbjct: 3 LHEYQSKHLLKKY-------NIPVPASEVVFNPDAA--VDAAAKIGGDRWVVKAQVHAGG 53
Query: 66 RGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGCKGPITTFIVEPFVPHNQEYYLSIV 122
RGK+G V L + ++ VK LG + + P+ +VE +E YL V
Sbjct: 54 RGKAGGVRLVKNKEELKSAVKALLGMRLVTYQTDERGQPVNQILVEQTSDIARELYLGAV 113
Query: 123 SDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFRG---- 176
DR I F S GG+EIE+ +K L +T+D P I P + R
Sbjct: 114 IDRASQRIVFMASTEGGVEIEKVAEKSPEKIL----KVTVD---PAIGLQPFQCRQLFFG 166
Query: 177 ----------KIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFK 225
D +MG++ +F + D S +E+NP + +GE LD + +DD+A ++
Sbjct: 167 LGLQDLKQMRSFTDIVMGLYRLFTERDLSLLEINPLVITGSGELICLDAKINIDDSALYR 226
Query: 226 NFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIY 285
+ + +T+ H E + + + G I MV G G ++
Sbjct: 227 QSE----------LREMRDTTQEDEH---ETMAQQWELNYIKLDGNIGCMVNGAGLAMAT 273
Query: 286 ADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFT 345
D + G + N+ + G+ +E V + ++++ +D + + + I GGI
Sbjct: 274 MDLIKLSG--GDPANFLDVGGSATKERVTEAFKIIV----SDKNVKGILVNIFGGIVRCD 327
Query: 346 DVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKM 388
+A +GII A++E + + VR G N Q G K+
Sbjct: 328 LIA---DGIISAVKE-----VGIDVPVVVRLEGNNAQLGAKKL 362
>sp|Q5X7K6|SUCC_LEGPA Succinyl-CoA ligase [ADP-forming] subunit beta OS=Legionella
pneumophila (strain Paris) GN=sucC PE=3 SV=1
Length = 387
Score = 79.0 bits (193), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 169/403 (41%), Gaps = 72/403 (17%)
Query: 6 IREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPDMLFGK 65
+ EY +K+L A L + +V + + + L + LS+SR VVK + G
Sbjct: 3 LHEYQAKQLF-------ASYGLPVPRGEVAYNVEDALLVASQ--LSTSRWVVKAQVHAGG 53
Query: 66 RGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGCKGPITTFIVEPFVPHNQEYYLSIV 122
RGK+G V L ++A K LGT + + P+ +VE ++E YL V
Sbjct: 54 RGKAGGVKLVSSKDELAAVAKSMLGTRLVTYQTDARGQPVNAILVEETCEIDKELYLGAV 113
Query: 123 SDRLG--CTISFSECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFRG---K 177
DR I S GG+EIE+ + T + + PL+ +P + R K
Sbjct: 114 VDRATRRVVIMASTEGGVEIEK-------VAHETPEKIFKVVVDPLVGVMPFQCRETAFK 166
Query: 178 IG----------DFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFKN 226
+G +MG+ +F D D S +E+NP + +G+ LD + +D A F+
Sbjct: 167 LGLKDDQIKQFTHLMMGLGKMFVDCDLSLLEINPLVITKSGQLICLDGKINIDGNALFRQ 226
Query: 227 FKKWANIEFPLPFGRVLSSTESFIHSLDEKTSAS---LKFTVLNPKGRIWTMVAGGGASV 283
K L + D + AS L + L+ G I MV G G ++
Sbjct: 227 PK--------------LKNMRDVSQEDDRENRASDWELNYIPLD--GTIGCMVNGAGLAM 270
Query: 284 IYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIG--GGI 341
D + G E N+ + G +E V + ++++ D + + +L+ GGI
Sbjct: 271 ATMDVIKLHG--GEPANFLDVGGGATKERVSEALKIIV------SDEKVKGILVNIFGGI 322
Query: 342 ANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTG 384
+A +GI+ A++E + K+ + VR G N Q G
Sbjct: 323 VRCDLIA---DGILAAVKEVDVKIP-----VVVRLEGNNAQLG 357
>sp|Q5WZ04|SUCC_LEGPL Succinyl-CoA ligase [ADP-forming] subunit beta OS=Legionella
pneumophila (strain Lens) GN=sucC PE=3 SV=1
Length = 387
Score = 78.6 bits (192), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 169/403 (41%), Gaps = 72/403 (17%)
Query: 6 IREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPDMLFGK 65
+ EY +K+L A L + +V + + + L + LS+SR VVK + G
Sbjct: 3 LHEYQAKQLF-------ASYGLPVPRGEVAYNVEDALLVASQ--LSTSRWVVKAQVHAGG 53
Query: 66 RGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGCKGPITTFIVEPFVPHNQEYYLSIV 122
RGK+G V L ++A K LGT + + P+ +VE ++E YL V
Sbjct: 54 RGKAGGVKLVSSKDELAAVAKSMLGTRLVTYQTDARGQPVNAILVEETCEIDKELYLGAV 113
Query: 123 SDRLG--CTISFSECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFRG---K 177
DR I S GG+EIE+ + T + + PL+ +P + R K
Sbjct: 114 VDRSTRRVVIMASTEGGVEIEK-------VAHETPEKIFKVVVDPLVGVMPFQCRETAFK 166
Query: 178 IG----------DFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFKN 226
+G +MG+ +F D D S +E+NP + +G+ LD + +D A F+
Sbjct: 167 LGLKDDQIKQFTHLMMGLGKMFVDCDLSLLEINPLVITKSGQLICLDGKINIDGNALFRQ 226
Query: 227 FKKWANIEFPLPFGRVLSSTESFIHSLDEKTSAS---LKFTVLNPKGRIWTMVAGGGASV 283
K L + D + AS L + L+ G I MV G G ++
Sbjct: 227 PK--------------LKNMRDVSQEDDRENRASDWELNYIPLD--GTIGCMVNGAGLAM 270
Query: 284 IYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIG--GGI 341
D + G E N+ + G +E V + ++++ D + + +L+ GGI
Sbjct: 271 ATMDVIKLHG--GEPANFLDVGGGATKERVSEALKIIV------SDEKVKGILVNIFGGI 322
Query: 342 ANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTG 384
+A +GI+ A++E + K+ + VR G N Q G
Sbjct: 323 VRCDLIA---DGILAAVKEVDVKIP-----VVVRLEGNNAQLG 357
>sp|A5IH21|SUCC_LEGPC Succinyl-CoA ligase [ADP-forming] subunit beta OS=Legionella
pneumophila (strain Corby) GN=sucC PE=3 SV=1
Length = 387
Score = 78.6 bits (192), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 169/403 (41%), Gaps = 72/403 (17%)
Query: 6 IREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPDMLFGK 65
+ EY +K+L A L + +V + + + L + LS+SR VVK + G
Sbjct: 3 LHEYQAKQLF-------ASYGLPVPRGEVAYNVEDALLVASQ--LSTSRWVVKAQVHAGG 53
Query: 66 RGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGCKGPITTFIVEPFVPHNQEYYLSIV 122
RGK+G V L ++A K LGT + + P+ +VE ++E YL V
Sbjct: 54 RGKAGGVKLVSSKDELAAVAKSMLGTRLVTYQTDARGQPVNAILVEETCEIDKELYLGAV 113
Query: 123 SDRLG--CTISFSECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFRG---K 177
DR I S GG+EIE+ + T + + PL+ +P + R K
Sbjct: 114 VDRSTRRVVIMASTEGGVEIEK-------VAHETPEKIFKVVVDPLVGVMPFQCRETAFK 166
Query: 178 IG----------DFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFKN 226
+G +MG+ +F D D S +E+NP + +G+ LD + +D A F+
Sbjct: 167 LGLKDDQIKQFTHLMMGLGKMFVDCDLSLLEINPLVITKSGQLICLDGKINIDGNALFRQ 226
Query: 227 FKKWANIEFPLPFGRVLSSTESFIHSLDEKTSAS---LKFTVLNPKGRIWTMVAGGGASV 283
K L + D + AS L + L+ G I MV G G ++
Sbjct: 227 PK--------------LKNMRDVSQEDDRENRASDWELNYIPLD--GTIGCMVNGAGLAM 270
Query: 284 IYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIG--GGI 341
D + G E N+ + G +E V + ++++ D + + +L+ GGI
Sbjct: 271 ATMDVIKLHG--GEPANFLDVGGGATKERVSEALKIIV------SDEKVKGILVNIFGGI 322
Query: 342 ANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTG 384
+A +GI+ A++E + K+ + VR G N Q G
Sbjct: 323 VRCDLIA---DGILAAVKEVDVKIP-----VVVRLEGNNAQLG 357
>sp|Q2YXM1|SUCC_STAAB Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
aureus (strain bovine RF122 / ET3-1) GN=sucC PE=3 SV=1
Length = 388
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 169/397 (42%), Gaps = 54/397 (13%)
Query: 42 ELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGC 98
E K +S VVK + G RGK+G V + L++V + K LG + + G
Sbjct: 30 EAVEKAKEFNSDVYVVKAQIHAGGRGKAGGVKIAKSLSEVETYAKELLGKTLVTHQTGPE 89
Query: 99 KGPITTFIVEPFVPHNQEYYLSIVSDRL--GCTISFSECGGIEIEENWDKV-KTIFLPTE 155
I +E +EYY+ V DR T+ SE GG EIEE K + IF T
Sbjct: 90 GKEIKRLYIEEGCAIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETI 149
Query: 156 KHMTLDACAPLIA-------TLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPF-TLVNG 207
+ +P A +P E K F++ ++ VF + D S +E+NP T +G
Sbjct: 150 DPVI--GLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADG 207
Query: 208 EPYPLDMRGELDDTAAF--KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTV 265
+ LD + DD A F K+ + ++E P E+ H L +
Sbjct: 208 DVLVLDAKINFDDNALFRHKDVVELRDLEEEDP-----KEIEASKH--------DLSYIA 254
Query: 266 LNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCAT 325
L+ G I MV G G ++ DT+ G N+ + G+ E+V + ++++
Sbjct: 255 LD--GDIGCMVNGAGLAMATMDTINHFG--GNPANFLDAGGSATREKVTEAFKIIL---- 306
Query: 326 ADPDGRKRALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGL 385
D + + + I GGI +A GI+ A++E + L + VR G N + G
Sbjct: 307 GDENVKGIFVNIFGGIMKCDVIA---EGIVEAVKEVDLTLP-----LVVRLEGTNVELG- 357
Query: 386 AKMRALGEELGIPLEVYGPEATMTGICKQAIDCIMSA 422
+ + ++ G+ +E P ATM ++ + + A
Sbjct: 358 ---KKILKDSGLAIE---PAATMAEGAQKIVKLVKEA 388
>sp|Q4L5U8|SUCC_STAHJ Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=sucC PE=3 SV=1
Length = 388
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 167/397 (42%), Gaps = 54/397 (13%)
Query: 42 ELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGC 98
E K L + VVK + G RGK+G V + L++V + LG ++ + G
Sbjct: 30 EAVEKAKELDTEIYVVKAQIHAGGRGKAGGVKIAKSLSEVETYANELLGKQLVTHQTGPE 89
Query: 99 KGPITTFIVEPFVPHNQEYYLSIVSDRLGCTISF--SECGGIEIEENWDKV-KTIFLPTE 155
+ +E +EYY+ V DR I+ SE GG EIEE K + IF T
Sbjct: 90 GKEVKRLYIEQGCDIQKEYYVGFVIDRATDRITLMASEEGGTEIEEVAAKTPEKIFKETI 149
Query: 156 KHMTLDACAPLIA-------TLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPF-TLVNG 207
+ +P A +P E K F++ ++ VF + D S +E+NP T G
Sbjct: 150 DPVV--GLSPYQARRIAFNINIPKESINKAAKFLISLYNVFIEKDCSIVEINPLVTTGEG 207
Query: 208 EPYPLDMRGELDDTAAF--KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTV 265
E LD + DD A F K+ ++ ++E P E + L +
Sbjct: 208 EVLALDAKINFDDNALFRHKDIQELRDLEEEDP-------------KEIEASKYDLSYIA 254
Query: 266 LNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCAT 325
L+ G I MV G G ++ DT+ G N+ + G +E+V + ++++
Sbjct: 255 LD--GDIGCMVNGAGLAMATMDTINHFG--GNPANFLDVGGGATKEKVTEAFKIIL---- 306
Query: 326 ADPDGRKRALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGL 385
D + + + I GGI +A GI+ A++E E L + VR G N + G
Sbjct: 307 GDDNVKGIFVNIFGGIMKCDVIA---EGIVAAVKEVELTLP-----LVVRLEGTNVERG- 357
Query: 386 AKMRALGEELGIPLEVYGPEATMTGICKQAIDCIMSA 422
+ + E G+ +E P ATM ++ + + A
Sbjct: 358 ---KEILNESGLAIE---PAATMAEGAQKIVKLVKEA 388
>sp|A7Z4M9|SUCC_BACA2 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus
amyloliquefaciens (strain FZB42) GN=sucC PE=3 SV=1
Length = 385
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 155/369 (42%), Gaps = 47/369 (12%)
Query: 6 IREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPDMLFGK 65
I EY K +L+++ + + +V + + E K LSSS VVK + G
Sbjct: 3 IHEYQGKEVLRKY-------GVSVPEGKVAFTAE--EAVEKAESLSSSVYVVKAQIHAGG 53
Query: 66 RGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGCKGPITTFIVEPFVPHNQEYYLSIV 122
RGK+G V + +V E+ + LG + + G I ++E +EYY+ +V
Sbjct: 54 RGKAGGVKIAKTKDEVKEYAEELLGKTLVTHQTGPDGQVIKRLLIEEGCDIKKEYYVGLV 113
Query: 123 SDRLGCTISF--SECGGIEIEENWDKV-----KTIFLPTEKHMTLDACAPLIA-TLPLEF 174
DR I SE GG EIEE +K K + P A A +P E
Sbjct: 114 LDRATSRIVLMASEEGGTEIEEVAEKTPEKIKKAVIDPAVGLQGYQAREIAFAINIPKEL 173
Query: 175 RGKIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAF--KNFKKWA 231
GK F++G++ F + D S E+NP + +G LD + D A + K+ ++
Sbjct: 174 VGKAAKFMLGLYKAFVEKDCSIAEINPLVVTGDGNVMALDAKLNFDSNALYRQKDIMEYR 233
Query: 232 NIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGD 291
+++ P E ++ + ++ G I MV G G ++ D +
Sbjct: 234 DLDEEDP---------------KEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKH 278
Query: 292 LGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTF 351
Y E N+ + G E+V + ++++ +D + + + I GGI +A
Sbjct: 279 --YGGEPANFLDVGGGATAEKVTEAFKIIL----SDQNVKGIFVNIFGGIMKCDVIA--- 329
Query: 352 NGIIRALRE 360
G++ A R+
Sbjct: 330 EGVVEATRQ 338
>sp|Q5WFP4|SUCC_BACSK Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus clausii
(strain KSM-K16) GN=sucC PE=3 SV=1
Length = 386
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 170/401 (42%), Gaps = 52/401 (12%)
Query: 6 IREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPDMLFGK 65
I EY K +L+ + + + + +V S D + KE L SS VVK + G
Sbjct: 3 IHEYQGKEILRSY-------GVAVPNGKVAFSVDEAVEAAKE--LGSSVSVVKAQIHAGG 53
Query: 66 RGKSG--LVALNLDLAQV-AEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQEYYLSIV 122
RGK+G VA NLD + AE + G+ + G + ++E EYY+ +V
Sbjct: 54 RGKAGGVKVAKNLDEVRTYAEEILGKTLVTHQTGPAGKEVKRLLIEEGCDIKSEYYIGLV 113
Query: 123 SDRLGCTISF--SECGGIEIEENWDKV-----KTIFLPTEKHMTLDAC-APLIATLPLEF 174
DR ++ SE GG EIEE +K K + P A +P E
Sbjct: 114 VDRATSSVVLMASEEGGTEIEEVAEKTPEKIFKEVIDPAVGLQGFQARRIAFNINIPKEL 173
Query: 175 RGKIGDFIMGVFAVFQDLDFSFIEMNPF-TLVNGEPYPLDMRGELDDTAAF--KNFKKWA 231
G+ F+MG++ VF D D S E+NP T +G+ LD + D A + K+ +
Sbjct: 174 VGQAVKFMMGLYQVFVDKDASIAEINPLVTTGDGKVMALDAKFNFDSNALYRHKDILELR 233
Query: 232 NIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGD 291
++E E + + E + L + L+ G I MV G G ++ D +
Sbjct: 234 DLE------------EEDVKEI-EASKHDLNYIALD--GNIGCMVNGAGLAMATMDIIKH 278
Query: 292 LGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTF 351
Y + N+ + G E+V + ++++ +D + + + I GGI +A
Sbjct: 279 --YNGDPANFLDVGGGATAEKVTEAFKLIL----SDENVKGIFVNIFGGIMKCDIIA--- 329
Query: 352 NGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKMRALG 392
+G+I A +E + + VR G N + G ++ G
Sbjct: 330 DGVIAATKE-----VGLEIPLVVRLEGTNVELGKKMLKESG 365
>sp|P80886|SUCC_BACSU Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus subtilis
(strain 168) GN=sucC PE=1 SV=2
Length = 385
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 153/369 (41%), Gaps = 47/369 (12%)
Query: 6 IREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPDMLFGK 65
I EY K +L+++ + + + + ES LSSS VVK + G
Sbjct: 3 IHEYQGKEVLRKYGVSVPEGKVAFTAEEAVESA---------KSLSSSVYVVKAQIHAGG 53
Query: 66 RGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGCKGPITTFIVEPFVPHNQEYYLSIV 122
RGK+G V + L +V + + LG + + G I ++E +EYY+ +V
Sbjct: 54 RGKAGGVKIAKSLDEVKAYAEELLGKTLVTHQTGPDGQVIKRLLIEEGCDIKKEYYIGLV 113
Query: 123 SDRLGCTISF--SECGGIEIEENWDKV-----KTIFLPTEKHMTLDACAPLIA-TLPLEF 174
DR I SE GG EIEE +K K + P A A +P E
Sbjct: 114 LDRATSRIVLMASEEGGTEIEEVAEKTPEKIKKAVIDPAVGLQGYQAREIAFAINIPKEL 173
Query: 175 RGKIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAF--KNFKKWA 231
GK F++G++ F + D S E+NP + +G LD + D A + K+ ++
Sbjct: 174 VGKAAKFMLGLYKAFVEKDCSIAEINPLVVTGDGNVMALDAKLNFDSNALYRQKDIMEYR 233
Query: 232 NIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGD 291
+++ P E ++ + ++ G I MV G G ++ D +
Sbjct: 234 DLDEEDP---------------KEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKH 278
Query: 292 LGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTF 351
Y E N+ + G E+V + ++++ +D + + + I GGI +A
Sbjct: 279 --YGGEPANFLDVGGGATAEKVTEAFKIIL----SDQNVKGIFVNIFGGIMKCDVIA--- 329
Query: 352 NGIIRALRE 360
G++ A R+
Sbjct: 330 EGVVEATRQ 338
>sp|Q9KA20|SUCC_BACHD Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus
halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344
/ JCM 9153 / C-125) GN=sucC PE=3 SV=1
Length = 386
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 168/399 (42%), Gaps = 48/399 (12%)
Query: 6 IREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPDMLFGK 65
I EY K LL+++ + + + +V S D + KE L S+ VVK + G
Sbjct: 3 IHEYQGKELLRQY-------GVAVPNGKVAFSVDEAVEAAKE--LGSNVCVVKAQIHAGG 53
Query: 66 RGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGCKGPITTFIVEPFVPHNQEYYLSIV 122
RGK+G V + +L +V + LG + + G + ++E +EYY+ +V
Sbjct: 54 RGKAGGVKVAKNLDEVRTYADEILGKTLVTHQTGPEGKEVKRLLIEEGCDIQKEYYVGLV 113
Query: 123 SDRLGCTISF--SECGGIEIEENWDKV-----KTIFLPTEKHMTLDACA-PLIATLPLEF 174
DR + SE GG EIEE +K K I P A +P E
Sbjct: 114 LDRATSRVVMMASEEGGTEIEEVAEKTPEKIFKEIIDPVVGLQGFQARRLAFNINIPKEL 173
Query: 175 RGKIGDFIMGVFAVFQDLDFSFIEMNPF-TLVNGEPYPLDMRGELDDTAAFKNFKKWANI 233
G+ F++G++ VF + D S E+NP T +G+ LD + D A +++ A +
Sbjct: 174 VGQAVKFMLGLYKVFVEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNAL---YRQKAIL 230
Query: 234 EFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLG 293
EF R L + E ++ + ++ G I MV G G ++ D +
Sbjct: 231 EF-----RDLDEEDP-----KEIEASKYDLSYISLDGNIGCMVNGAGLAMATMDIIKH-- 278
Query: 294 YASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNG 353
Y E N+ + G E+V + ++++ +D + + I GGI +A G
Sbjct: 279 YNGEPANFLDVGGGATAEKVTEAFKIIL----SDESVKGIFVNIFGGIMKCDVIA---EG 331
Query: 354 IIRALREKESKLKAARMHIFVRRGGPNYQTGLAKMRALG 392
+I+A +E + + VR G N G K+ G
Sbjct: 332 VIQATKE-----VGLSIPLVVRLEGTNVDLGKKKLEESG 365
>sp|Q65JP0|SUCC_BACLD Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus
licheniformis (strain DSM 13 / ATCC 14580) GN=sucC PE=3
SV=1
Length = 386
Score = 75.5 bits (184), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 163/393 (41%), Gaps = 52/393 (13%)
Query: 6 IREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPDMLFGK 65
I EY K +L+++ + + +V + D E LSSS VVK + G
Sbjct: 3 IHEYQGKEVLRKY-------GVAVPEGKVAFTAD--EAVKAAEALSSSVYVVKAQIHAGG 53
Query: 66 RGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGCKGPITTFIVEPFVPHNQEYYLSIV 122
RGK+G V + +V + + LG + + G I ++E +EYY+ +V
Sbjct: 54 RGKAGGVKIAKSKEEVKAYAEELLGKTLVTHQTGPDGQQIKRLLIEEGCDIKKEYYVGLV 113
Query: 123 SDRLGCTISF--SECGGIEIEENWDK-----VKTIFLPTEKHMTLDACAPLIA-TLPLEF 174
DR I SE GG EIEE +K VK + P + A A +P E
Sbjct: 114 LDRATSRIVLMASEEGGTEIEEVAEKTPEKIVKEVIDPAVGLQSYQARKIAFAINIPKEL 173
Query: 175 RGKIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAF--KNFKKWA 231
G+ F+MG++ F + D S E+NP + +G+ LD + D A + K+ ++
Sbjct: 174 VGQAVKFMMGLYKAFTEKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRQKDILEYR 233
Query: 232 NIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGD 291
+++ P E ++ + ++ G I MV G G ++ D +
Sbjct: 234 DLDEEDP---------------KEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKH 278
Query: 292 LGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTF 351
Y E N+ + G E+V + ++++ +D + + + I GGI +A
Sbjct: 279 --YGGEPANFLDVGGGATAEKVTEAFKIIL----SDQNVKGIFVNIFGGIMKCDVIA--- 329
Query: 352 NGIIRALREKESKLKAARMHIFVRRGGPNYQTG 384
G++ A +K + + VR G N G
Sbjct: 330 EGVVEA-----TKQVGLTLPLVVRLEGTNVDLG 357
>sp|B2V8I4|SUCC_SULSY Succinyl-CoA ligase [ADP-forming] subunit beta
OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=sucC
PE=3 SV=1
Length = 389
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 163/375 (43%), Gaps = 47/375 (12%)
Query: 39 DFSELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVE--MG 96
D E L + +VVK + G RGK+G V L + +V + LG ++
Sbjct: 27 DVKEAVEAAEELGTWPVVVKAQIHAGGRGKAGGVKLAKSIEEVQQIASELLGKKLATFQT 86
Query: 97 GCKG-PITTFIVEPFVPHNQEYYLSIVSDRLGC--TISFSECGGIEIEE----NWDKV-- 147
G +G P++ +E ++E+Y++I DR I S GG+EIEE N + +
Sbjct: 87 GPEGLPVSRLYIEEATAIDKEFYVAITLDRSKSKPIIMVSAAGGMEIEEVAATNPEAIIT 146
Query: 148 KTI--FLPTEKHMTLDACAPLIATLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLV 205
+TI F+ + + L LP K ++ ++ +LD S +E+NP L
Sbjct: 147 QTIEPFIGLRSYHARELALKL--GLPKNLLNKAASIFTTLYKIYIELDASMVEINPLVLT 204
Query: 206 -NGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFT 264
+G LD + E DD F++ + ++ P + + F +L +
Sbjct: 205 KDGNIVILDAKIEFDDNGLFRH-PEIMEMDDPTQISPLEVEAKKF----------NLNYI 253
Query: 265 VLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCA 324
L+ G I MV G G ++ DT+ G E N+ + G+ N ++ ++++
Sbjct: 254 KLD--GNIACMVNGAGLAMSTMDTIKLAG--GEPANFLDVGGSANATQIANAFKIIL--- 306
Query: 325 TADPDGRKRALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTG 384
+DP+ + + I GGI +A GII A +E + + + VR G N + G
Sbjct: 307 -SDPNVKAIFINIFGGILRCDRLA---EGIITAAKE-----VSINVPVIVRMEGTNVELG 357
Query: 385 LAKMRALGEELGIPL 399
+ + +E G+PL
Sbjct: 358 ----KKMLQESGLPL 368
>sp|B9DPG0|SUCC_STACT Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
carnosus (strain TM300) GN=sucC PE=3 SV=1
Length = 388
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 162/384 (42%), Gaps = 54/384 (14%)
Query: 42 ELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGC 98
E K L + VVK + G RGK+G V + L++V + LG ++ + G
Sbjct: 30 EAVEKAKELDTDVYVVKAQIHAGGRGKAGGVKIAKSLSEVEAYANELLGKQLVTHQTGPE 89
Query: 99 KGPITTFIVEPFVPHNQEYYLSIVSDRLG--CTISFSECGGIEIEENWDKV-KTIFLPTE 155
+ +E +EYY+ V DR T+ SE GG EIEE K + IF T
Sbjct: 90 GKEVKRLYIEEGADIKKEYYVGFVIDRATDRVTLMASEEGGTEIEEVAAKSPEKIFKETI 149
Query: 156 KHMTLDACAPLIA-------TLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NG 207
+ AP A +P E K F++ ++ VF + D S +E+NP L G
Sbjct: 150 DPVV--GLAPFQARRIAFNINIPKESINKAAKFLIALYNVFIEKDCSIVEINPLVLTGEG 207
Query: 208 EPYPLDMRGELDDTAAF--KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTV 265
+ LD + DD A F K+ + ++E P E + L +
Sbjct: 208 DVLALDAKINFDDNALFRHKDILELRDLEEEDP-------------KEIEASKYDLSYIA 254
Query: 266 LNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCAT 325
L+ G I MV G G ++ DT+ G N+ + G +E+V + ++++
Sbjct: 255 LD--GDIGCMVNGAGLAMATMDTINHFG--GNPANFLDVGGGATKEKVTEAFKIIL---- 306
Query: 326 ADPDGRKRALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGL 385
D + + + I GGI +A GI+ A++E + L + VR G N + G
Sbjct: 307 GDDNVKGIFVNIFGGIMRCDIIA---EGIVAAVKEVDLTLP-----LVVRLEGTNVELG- 357
Query: 386 AKMRALGEELGIPLEVYGPEATMT 409
+ + ++ G+ +E P ATM
Sbjct: 358 ---KQILKDSGLAIE---PAATMA 375
>sp|A5UCR4|SUCC_HAEIE Succinyl-CoA ligase [ADP-forming] subunit beta OS=Haemophilus
influenzae (strain PittEE) GN=sucC PE=3 SV=1
Length = 389
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 156/377 (41%), Gaps = 61/377 (16%)
Query: 5 KIREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPDMLFG 64
+ EY +K+L + + L + + V +S D +L + LS + K + G
Sbjct: 2 NLHEYQAKQLFEHY-------GLPVKNGAVCQSVDEVDLVLAQ--LSGDKWAAKCQVHAG 52
Query: 65 KRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGCKGPITTFIVEPFVPHNQEYYLSI 121
RGK+G V L D+ + F + LG + + P+ E ++E+YLS
Sbjct: 53 GRGKAGGVKLVQDVEEARSFAEKWLGQRLVTFQTDKLGQPVNQIYFEETCDIDKEFYLSA 112
Query: 122 VSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFRG--- 176
V DR + F S GG++IEE + E PL LP + R
Sbjct: 113 VVDRASQKVVFIASPAGGMDIEEVAQNTPHLLHKVE-------IDPLFGGLPYQGRELAF 165
Query: 177 KIG----------DFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFK 225
K+G D MG+ +F + D S +E+NP L G LD + +DD A F+
Sbjct: 166 KLGLSGTQNKQFTDIFMGLSRLFLEKDLSLLEVNPLVLTQQGNLVCLDAKIAVDDNALFR 225
Query: 226 NFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTV--LNPKGRIWTMVAGGGASV 283
+ + LS+ + + D + + + KF + + +G I MV G G ++
Sbjct: 226 H--------------KDLSALQDLTQN-DAREAEAEKFQLNYVALEGDIGCMVNGAGLAM 270
Query: 284 IYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIAN 343
D V Y + N+ + G +E V + ++++ DP + + I GGI
Sbjct: 271 GTMDIVK--LYGGKPANFLDVGGGATKERVAEAFKIIL----TDPSVKVILVNIFGGIVR 324
Query: 344 FTDVATTFNGIIRALRE 360
+A G+I A+ E
Sbjct: 325 CDLIA---EGVIAAVNE 338
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.138 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 158,703,430
Number of Sequences: 539616
Number of extensions: 6868473
Number of successful extensions: 16472
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 445
Number of HSP's that attempted gapping in prelim test: 16055
Number of HSP's gapped (non-prelim): 470
length of query: 423
length of database: 191,569,459
effective HSP length: 120
effective length of query: 303
effective length of database: 126,815,539
effective search space: 38425108317
effective search space used: 38425108317
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)