Query 014515
Match_columns 423
No_of_seqs 203 out of 1171
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 12:59:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014515.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014515hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 100.0 2E-98 7E-103 762.0 48.2 419 1-419 63-485 (490)
2 3ed6_A Betaine aldehyde dehydr 100.0 6.1E-95 2.1E-99 742.1 48.9 421 1-423 91-518 (520)
3 3ros_A NAD-dependent aldehyde 100.0 9.8E-95 3.4E-99 735.2 46.3 415 1-418 45-459 (484)
4 3ifg_A Succinate-semialdehyde 100.0 9.4E-95 3.2E-99 736.0 45.0 414 1-416 69-483 (484)
5 3rh9_A Succinate-semialdehyde 100.0 2.4E-94 8.1E-99 735.5 47.7 415 1-417 68-484 (506)
6 3iwj_A Putative aminoaldehyde 100.0 5.5E-94 1.9E-98 734.2 49.0 421 1-423 69-497 (503)
7 3u4j_A NAD-dependent aldehyde 100.0 4.8E-94 1.7E-98 736.8 48.6 421 1-423 82-505 (528)
8 2o2p_A Formyltetrahydrofolate 100.0 3.6E-94 1.2E-98 735.9 46.9 415 1-416 95-516 (517)
9 1bxs_A Aldehyde dehydrogenase; 100.0 8.4E-94 2.9E-98 731.3 49.3 418 1-418 80-497 (501)
10 1o04_A Aldehyde dehydrogenase, 100.0 7.3E-94 2.5E-98 731.6 46.6 418 1-418 79-496 (500)
11 3ek1_A Aldehyde dehydrogenase; 100.0 6.6E-94 2.2E-98 731.9 44.2 413 1-417 89-502 (504)
12 4f3x_A Putative aldehyde dehyd 100.0 8.7E-94 3E-98 730.7 43.9 415 1-417 81-497 (498)
13 3b4w_A Aldehyde dehydrogenase; 100.0 1.9E-93 6.6E-98 728.2 45.0 414 1-417 67-482 (495)
14 3k2w_A Betaine-aldehyde dehydr 100.0 2.1E-93 7E-98 728.9 45.1 417 1-419 69-490 (497)
15 2d4e_A 5-carboxymethyl-2-hydro 100.0 1.3E-92 4.3E-97 725.5 49.6 415 1-418 83-506 (515)
16 3jz4_A Succinate-semialdehyde 100.0 1.1E-92 3.8E-97 721.9 48.5 414 1-416 66-480 (481)
17 3qan_A 1-pyrroline-5-carboxyla 100.0 1.2E-92 4.3E-97 727.8 48.6 415 1-418 93-517 (538)
18 1a4s_A ALDH, betaine aldehyde 100.0 4.4E-93 1.5E-97 726.9 44.9 414 1-417 77-496 (503)
19 3r31_A BADH, betaine aldehyde 100.0 2.8E-93 9.4E-98 729.4 42.4 411 1-417 71-488 (517)
20 1wnd_A Putative betaine aldehy 100.0 1E-92 3.5E-97 722.3 46.1 413 1-416 79-494 (495)
21 2imp_A Lactaldehyde dehydrogen 100.0 1.8E-92 6.2E-97 719.9 47.1 414 1-416 63-478 (479)
22 3prl_A NADP-dependent glyceral 100.0 8.9E-93 3E-97 724.4 44.9 410 1-418 68-484 (505)
23 2ve5_A BADH, betaine aldehyde 100.0 3.9E-92 1.3E-96 719.9 48.3 417 1-418 63-484 (490)
24 3i44_A Aldehyde dehydrogenase; 100.0 5E-92 1.7E-96 717.5 48.9 410 1-414 82-495 (497)
25 3etf_A Putative succinate-semi 100.0 9.7E-92 3.3E-96 712.4 48.2 413 1-416 48-460 (462)
26 3pqa_A Lactaldehyde dehydrogen 100.0 6.1E-92 2.1E-96 715.0 46.1 407 1-417 53-464 (486)
27 4e4g_A Methylmalonate-semialde 100.0 5E-92 1.7E-96 720.8 44.6 415 1-418 83-506 (521)
28 2w8n_A Succinate-semialdehyde 100.0 3.4E-92 1.2E-96 718.2 43.0 413 1-416 67-485 (487)
29 3r64_A NAD dependent benzaldeh 100.0 2.3E-91 7.7E-96 715.7 46.4 418 1-423 69-496 (508)
30 1uxt_A Glyceraldehyde-3-phosph 100.0 1.1E-91 3.7E-96 716.3 43.2 414 1-422 74-498 (501)
31 1uzb_A 1-pyrroline-5-carboxyla 100.0 1.6E-90 5.5E-95 710.6 48.8 413 1-416 93-515 (516)
32 2j6l_A Aldehyde dehydrogenase 100.0 1E-90 3.6E-95 709.5 47.0 414 1-417 78-499 (500)
33 1euh_A NADP dependent non phos 100.0 5.2E-91 1.8E-95 708.5 44.2 409 1-417 59-474 (475)
34 4dng_A Uncharacterized aldehyd 100.0 1E-90 3.5E-95 708.6 45.0 413 1-418 63-479 (485)
35 3ty7_A Putative aldehyde dehyd 100.0 1.1E-90 3.7E-95 707.1 39.9 409 1-415 64-475 (478)
36 1t90_A MMSDH, probable methylm 100.0 3.5E-90 1.2E-94 703.8 43.6 417 1-421 62-484 (486)
37 3sza_A Aldehyde dehydrogenase, 100.0 4.1E-89 1.4E-93 692.0 48.0 406 1-417 37-448 (469)
38 4h7n_A Aldehyde dehydrogenase; 100.0 4.2E-89 1.4E-93 694.3 43.6 417 1-423 47-472 (474)
39 4e3x_A Delta-1-pyrroline-5-car 100.0 2.2E-88 7.4E-93 697.8 47.7 421 1-423 119-559 (563)
40 3lns_A Benzaldehyde dehydrogen 100.0 4.6E-87 1.6E-91 676.4 46.6 403 1-416 47-456 (457)
41 3ju8_A Succinylglutamic semial 100.0 8.8E-87 3E-91 679.4 43.7 407 1-417 61-471 (490)
42 4f9i_A Proline dehydrogenase/d 100.0 2.1E-86 7E-91 718.1 47.6 415 1-417 587-1010(1026)
43 2y53_A Aldehyde dehydrogenase 100.0 1.1E-85 3.9E-90 677.9 41.0 411 1-416 63-518 (534)
44 3haz_A Proline dehydrogenase; 100.0 5.4E-84 1.9E-88 697.8 46.1 410 1-417 569-987 (1001)
45 1ez0_A ALDH, aldehyde dehydrog 100.0 7E-81 2.4E-85 638.9 40.6 398 1-414 49-480 (510)
46 3v4c_A Aldehyde dehydrogenase 100.0 3.5E-81 1.2E-85 643.7 38.2 402 1-417 82-517 (528)
47 3k9d_A LMO1179 protein, aldehy 100.0 3.9E-76 1.3E-80 597.5 29.7 393 1-418 31-450 (464)
48 1vlu_A Gamma-glutamyl phosphat 100.0 2.2E-77 7.6E-82 605.4 20.2 377 1-417 33-440 (468)
49 2h5g_A Delta 1-pyrroline-5-car 100.0 5.1E-75 1.7E-79 587.4 26.9 366 1-417 48-435 (463)
50 4ghk_A Gamma-glutamyl phosphat 100.0 5.9E-74 2E-78 578.1 29.5 369 1-417 45-439 (444)
51 1o20_A Gamma-glutamyl phosphat 100.0 7.4E-74 2.5E-78 574.6 26.7 367 1-417 33-422 (427)
52 3my7_A Alcohol dehydrogenase/a 100.0 3.1E-72 1E-76 567.2 25.4 394 1-420 26-452 (452)
53 4gic_A HDH, histidinol dehydro 97.6 0.053 1.8E-06 52.5 26.3 265 69-413 118-399 (423)
54 1kae_A HDH, histidinol dehydro 97.1 0.063 2.2E-06 52.0 19.9 262 71-413 114-392 (434)
55 2fiu_A Conserved hypothetical 73.6 7.1 0.00024 29.6 5.8 60 268-347 16-76 (99)
56 3v4g_A Arginine repressor; vib 66.2 18 0.00063 30.6 7.3 42 102-146 111-152 (180)
57 3v42_A Folliculin; tumor suppr 60.9 7.5 0.00026 34.3 4.1 66 98-171 21-86 (226)
58 1s7i_A Hypothetical protein PA 58.9 31 0.0011 27.2 7.1 72 271-348 31-108 (124)
59 3lo3_A Uncharacterized conserv 58.0 25 0.00087 26.2 6.1 60 268-347 15-75 (94)
60 2l82_A Designed protein OR32; 51.5 78 0.0027 24.1 12.6 140 162-343 5-146 (162)
61 1b4a_A Arginine repressor; hel 50.3 53 0.0018 26.8 7.4 39 104-146 87-125 (149)
62 1use_A VAsp, vasodilator-stimu 47.8 18 0.0006 23.0 3.0 29 5-33 12-40 (45)
63 3hhl_A RPA0582; alpha-beta-bar 45.5 61 0.0021 26.2 7.0 65 265-346 44-109 (143)
64 3pzy_A MOG; ssgcid, seattle st 42.2 23 0.00077 29.5 4.0 51 122-173 28-80 (164)
65 1y5e_A Molybdenum cofactor bio 42.1 18 0.00062 30.2 3.4 52 121-172 31-85 (169)
66 2xw6_A MGS, methylglyoxal synt 40.9 13 0.00044 30.0 2.1 88 93-190 16-111 (134)
67 1b93_A Protein (methylglyoxal 40.5 33 0.0011 28.2 4.6 114 82-221 12-135 (152)
68 2yvq_A Carbamoyl-phosphate syn 40.0 38 0.0013 27.3 4.9 63 127-191 60-132 (143)
69 3lap_A Arginine repressor; arg 39.8 1.6E+02 0.0056 24.4 11.3 42 101-146 105-146 (170)
70 3rfq_A Pterin-4-alpha-carbinol 36.7 25 0.00084 30.0 3.4 53 121-173 49-103 (185)
71 2ioj_A Hypothetical protein AF 35.8 45 0.0015 26.5 4.7 44 138-181 53-96 (139)
72 3iwt_A 178AA long hypothetical 35.2 37 0.0013 28.4 4.3 53 120-172 39-94 (178)
73 2zfz_A Arginine repressor; DNA 29.4 1.1E+02 0.0037 21.8 5.4 37 106-146 19-55 (79)
74 1b4b_A Arginine repressor; cor 29.2 1E+02 0.0035 21.4 5.1 37 106-146 11-47 (71)
75 2pjk_A 178AA long hypothetical 28.6 42 0.0014 28.2 3.5 54 119-172 38-94 (178)
76 2bon_A Lipid kinase; DAG kinas 26.8 1.4E+02 0.0048 27.5 7.2 104 110-217 33-146 (332)
77 3mwd_B ATP-citrate synthase; A 26.6 3.9E+02 0.013 24.7 11.5 87 105-197 166-264 (334)
78 1mkz_A Molybdenum cofactor bio 26.2 39 0.0013 28.2 2.8 52 121-172 28-82 (172)
79 1xxa_A ARGR, arginine represso 25.8 91 0.0031 22.2 4.3 37 107-146 14-50 (78)
80 2i2c_A Probable inorganic poly 25.5 74 0.0025 28.6 4.8 89 111-217 5-95 (272)
81 2p5m_A Arginine repressor; alp 24.8 1E+02 0.0034 22.2 4.5 37 106-146 23-59 (83)
82 1wu2_A MOEA protein, molybdopt 24.5 24 0.00083 34.0 1.3 52 122-173 212-264 (396)
83 2qv7_A Diacylglycerol kinase D 24.3 1.5E+02 0.0051 27.3 6.8 104 110-217 28-142 (337)
84 3kbq_A Protein TA0487; structu 24.1 45 0.0016 27.9 2.8 53 119-171 21-74 (172)
85 2l2l_A Transcriptional repress 23.8 1.3E+02 0.0046 18.4 4.0 21 2-22 2-22 (43)
86 2pbq_A Molybdenum cofactor bio 23.3 56 0.0019 27.4 3.3 51 121-172 25-81 (178)
87 2is8_A Molybdopterin biosynthe 22.0 41 0.0014 27.7 2.1 51 122-172 22-75 (164)
88 1vmd_A MGS, methylglyoxal synt 21.7 82 0.0028 26.5 3.9 124 73-221 18-151 (178)
89 1di6_A MOGA, molybdenum cofact 21.4 58 0.002 27.8 3.0 51 122-172 24-79 (195)
90 2ec4_A FAS-associated factor 1 20.4 42 0.0014 28.2 1.9 46 320-365 25-74 (178)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=2e-98 Score=761.95 Aligned_cols=419 Identities=44% Similarity=0.756 Sum_probs=400.9
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|+++|+++++.|++++++|++++++|+|||+.+++..|+..+++.++|++.+.++..+...+...+...+.+++|
T Consensus 63 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P 142 (490)
T 2wme_A 63 MTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREP 142 (490)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCccccccCCcceeEEecc
Confidence 58899999999999999999999999999999999999987689999999999999998887766655556778899999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.++++.|+.||+|
T Consensus 143 ~GVv~~I~PwNfP~~~~~~~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v 222 (490)
T 2wme_A 143 LGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLI 222 (490)
T ss_dssp CSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTC
T ss_pred eeEEEEeccccCcchhhhhhHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999888999999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~f 240 (423)
|+|+||||+.+|+.+.+.++..++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++|+|
T Consensus 223 ~~I~FTGS~~~G~~i~~~~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f 302 (490)
T 2wme_A 223 EKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARF 302 (490)
T ss_dssp CEEEEESCHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHH
T ss_pred CEEEEECChHHHHHHHHhhhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHH
Confidence 99999999999999987665547899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC----CCCceeecEEEecCCCccc
Q 014515 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDML 316 (423)
Q Consensus 241 ~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~ 316 (423)
+++|+++++++++|+|.|+++++||+++..+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|+
T Consensus 303 ~~~l~~~~~~l~vGdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~ 382 (490)
T 2wme_A 303 EAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMT 382 (490)
T ss_dssp HHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSH
T ss_pred HHHHHHHHHhCcCCCCccccCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCCh
Confidence 999999999999999999999999999999999999999999999999999998653 3689999999999999999
Q ss_pred ccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCC
Q 014515 317 IAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG 396 (423)
Q Consensus 317 ~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g 396 (423)
+++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||++....+.+||||+|.||+|
T Consensus 383 i~~eEiFGPVl~v~~~~~~deAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PFGG~k~SG~G 462 (490)
T 2wme_A 383 IVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVG 462 (490)
T ss_dssp HHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEES
T ss_pred hhhccccCCEEEEEEeCCHHHHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCCCCCCCCcccccccccC
Confidence 99999999999999999999999999999999999999999999999999999999999998777888999999999999
Q ss_pred CcchHHHHHhhheeeEEEEecCC
Q 014515 397 REKGSYSLSNYLQVKAVVTALKN 419 (423)
Q Consensus 397 ~~~g~~~l~~~~~~k~v~~~~~~ 419 (423)
+++|.+||++||+.|+|++++.+
T Consensus 463 re~G~~gl~~ft~~K~v~i~~g~ 485 (490)
T 2wme_A 463 RENGLTTLAHYTRIKSVQVELGD 485 (490)
T ss_dssp CBSHHHHHHTTEEEEEEEEECSC
T ss_pred chhHHHHHHHhhceeEEEEECCC
Confidence 99999999999999999999864
No 2
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=6.1e-95 Score=742.14 Aligned_cols=421 Identities=38% Similarity=0.672 Sum_probs=400.9
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCC-CCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||+.++.. |+..+++.+++++.+.++..+...+.. .+...++.++
T Consensus 91 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~ 169 (520)
T 3ed6_A 91 ETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEESYA-DMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKE 169 (520)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCeecccCCCCCccccccc
Confidence 57899999999999999999999999999999999999985 999999999999998877665544432 4567789999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.+|.+++.++|+|+|++|++++++.+.++.|+.||+
T Consensus 170 P~GVV~~I~PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~ 249 (520)
T 3ed6_A 170 PVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKE 249 (520)
T ss_dssp ECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTT
T ss_pred CccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999988889999999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
||.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+
T Consensus 250 vd~V~FTGS~~vG~~i~~~aa~-~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~ 328 (520)
T 3ed6_A 250 VDLVSFTGGIETGKHIMKNAAN-NVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDK 328 (520)
T ss_dssp CSEEEEESCHHHHHHHHHHHHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHH
T ss_pred cCEEEEECCHHHHHHHHHHhhh-cCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHH
Confidence 9999999999999999999987 799999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC----CCCceeecEEEecCCCcc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDM 315 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~ 315 (423)
|+++|+++++++++|+|.|+++++||+++..+++++++++++++++|+++++||.... ..|+|++|||+.+++++|
T Consensus 329 f~~~l~~~~~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~ 408 (520)
T 3ed6_A 329 FEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSM 408 (520)
T ss_dssp HHHHHHHHHTTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTS
T ss_pred HHHHHHHHHHhccCCCCccCCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCC
Confidence 9999999999999999999999999999999999999999999999999999998642 468999999999999999
Q ss_pred cccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCC
Q 014515 316 LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 395 (423)
Q Consensus 316 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~ 395 (423)
++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++...+.+||||+|.||+
T Consensus 409 ~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~ 488 (520)
T 3ed6_A 409 RIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGI 488 (520)
T ss_dssp HHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCCCTTSCBCCSGGGEE
T ss_pred ccccCceeCcEEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999887788999999999999
Q ss_pred CCcchHHHHHhhheeeEEEEecC--CCCCC
Q 014515 396 GREKGSYSLSNYLQVKAVVTALK--NPAWL 423 (423)
Q Consensus 396 g~~~g~~~l~~~~~~k~v~~~~~--~~~~~ 423 (423)
|+++|.+|+++||+.|+|+++.. ...||
T Consensus 489 Gre~G~~gl~~~t~~k~v~~~~~~~~~~~~ 518 (520)
T 3ed6_A 489 GRELGKEGLEEYLVSKHILTNTNPQLVNWF 518 (520)
T ss_dssp SCBSHHHHHHTTEEEEEEEEESSCCCCCCS
T ss_pred CccchHHHHHHhhceEEEEEcCCCCccCcc
Confidence 99999999999999999999875 35676
No 3
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=9.8e-95 Score=735.21 Aligned_cols=415 Identities=29% Similarity=0.465 Sum_probs=397.8
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++. .|+..+++.+++++.++++..+...+...+...+..++|
T Consensus 45 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P 123 (484)
T 3ros_A 45 EEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSESK-EEVELCVSICNYYADHGPEMLKPTKLNSDLGNAYYLKQS 123 (484)
T ss_dssp SCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHTSCEEECCTTSEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCeeccCCCceeEEEecC
Confidence 5789999999999999999999999999999999999998 499999999999999888876665443456678999999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++|+++|++.+.++ |+.||+|
T Consensus 124 ~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~v 202 (484)
T 3ros_A 124 TGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRI 202 (484)
T ss_dssp CCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTE
T ss_pred CceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999998777888 9999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~f 240 (423)
|.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|
T Consensus 203 d~I~fTGS~~~G~~i~~~aa~-~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f 281 (484)
T 3ros_A 203 QGVALTGSERGGSAVAEAAGK-NLKKSTMELGGNDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEV 281 (484)
T ss_dssp EEEEEESCHHHHHHHHHHHHH-TTCEEEEECCCCCEEEECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHH
T ss_pred CEEEEECCHHHHHHHHHHHhc-cCCceEeecCCCCcceeCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHH
Confidence 999999999999999999987 8999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCccccccc
Q 014515 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKD 320 (423)
Q Consensus 241 ~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~ 320 (423)
+++|+++++++++|+|.|+++++||+++..+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++|
T Consensus 282 ~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~e 361 (484)
T 3ros_A 282 LHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDK 361 (484)
T ss_dssp HHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTS
T ss_pred HHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCccccc
Confidence 99999999999999999999999999999999999999999999999999999876668999999999999999999999
Q ss_pred ccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCcch
Q 014515 321 EIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKG 400 (423)
Q Consensus 321 E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g 400 (423)
|+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++...+.+||||+|.||+|+++|
T Consensus 362 EiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G 441 (484)
T 3ros_A 362 EVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTVINGRWITSGELPFGGIKKSGYGRELS 441 (484)
T ss_dssp CCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCHHHHHHHHHHSCSSCCEETSCCCCCTTSCBCCSGGGEESCBSH
T ss_pred ccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCccceEEECCCCCCCCCCCcCCcCcccCCcCch
Confidence 99999999999999999999999999999999999999999999999999999999987788999999999999999999
Q ss_pred HHHHHhhheeeEEEEecC
Q 014515 401 SYSLSNYLQVKAVVTALK 418 (423)
Q Consensus 401 ~~~l~~~~~~k~v~~~~~ 418 (423)
.+|+++|++.|+|+++..
T Consensus 442 ~~gl~~ft~~K~v~~~~~ 459 (484)
T 3ros_A 442 GLGLMAFVNEHLVIDVTK 459 (484)
T ss_dssp HHHHTTTCEEEEEEECGG
T ss_pred HHHHHHhheeEEEEECCC
Confidence 999999999999998853
No 4
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=9.4e-95 Score=735.98 Aligned_cols=414 Identities=39% Similarity=0.640 Sum_probs=395.6
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCC-CCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..+++. |+..+++.++|++.+.++..+...+.. .+...+++++
T Consensus 69 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~ 147 (484)
T 3ifg_A 69 KTAKERAAILRRWFDLVIANSDDLALILTTEQGKPLAEAKG-EIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKE 147 (484)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEec
Confidence 57899999999999999999999999999999999999875 999999999999998877665544432 3567889999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++|+++|++.+.++.|+.||+
T Consensus 148 P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~ 227 (484)
T 3ifg_A 148 PIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPI 227 (484)
T ss_dssp ECSSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTT
T ss_pred CCcEEEEECCCcChHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999878889999999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
||.|+||||+.+|+.|++.+++ ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+
T Consensus 228 v~~v~FTGS~~~G~~i~~~aa~-~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~ 306 (484)
T 3ifg_A 228 VRKLSFTGSTAVGRLLMAQSAP-TVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDA 306 (484)
T ss_dssp CCEEEEESCHHHHHHHHHHTGG-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHH
T ss_pred cCEEEEECCHHHHHHHHHHhhc-cCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHH
Confidence 9999999999999999999887 789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCcccccc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAK 319 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~ 319 (423)
|+++|+++++++++|+|.|+++++||+++..+++++++++++++++|+++++||...+..|+|++|||+.+++++|++++
T Consensus 307 f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~ 386 (484)
T 3ifg_A 307 FADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAK 386 (484)
T ss_dssp HHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGT
T ss_pred HHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhC
Confidence 99999999999999999999999999999999999999999999999999999987555799999999999999999999
Q ss_pred cccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCcc
Q 014515 320 DEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREK 399 (423)
Q Consensus 320 ~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~ 399 (423)
||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.....+.+||||+|+||+|+++
T Consensus 387 eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~Gr~~ 466 (484)
T 3ifg_A 387 EETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREG 466 (484)
T ss_dssp SCCCSSEEEEEEECCHHHHHHHHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCEETTEECCBS
T ss_pred CeeeCcEEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCcCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999997777889999999999999999
Q ss_pred hHHHHHhhheeeEEEEe
Q 014515 400 GSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 400 g~~~l~~~~~~k~v~~~ 416 (423)
|.+|+++||+.|+|++.
T Consensus 467 g~~gl~~~~~~k~v~~~ 483 (484)
T 3ifg_A 467 SHYGIDDYVVIKYLCVA 483 (484)
T ss_dssp TTTTTGGGEEEEEEEEE
T ss_pred hHHHHHHhhceEEEEEe
Confidence 99999999999999864
No 5
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=2.4e-94 Score=735.52 Aligned_cols=415 Identities=34% Similarity=0.574 Sum_probs=397.4
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEee-c
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLH-E 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 79 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++. .|+..+++.+++++.++++..+...+...+...++.+ +
T Consensus 68 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (506)
T 3rh9_A 68 WPIETRRKWLEDIRDGLKENREEIGRILCMEHGKPWKEAQ-GEVDYAAGFFDYCAKHISALDSHTIPEKPKDCTWTVHYR 146 (506)
T ss_dssp CCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGGCCEECSCCGGGCEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCceeeEeecc
Confidence 5789999999999999999999999999999999999998 5999999999999999888776655443456678889 9
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..|++++.++|+|+|++|+++|++.+.++.|+.||+
T Consensus 147 P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~ 226 (506)
T 3rh9_A 147 PVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKD 226 (506)
T ss_dssp ECCSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTT
T ss_pred cceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999988889999999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
||.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+
T Consensus 227 vd~I~FTGS~~vG~~i~~~aa~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~ 305 (506)
T 3rh9_A 227 VPMLSFTGSTEVGRKLIVDTAE-QVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADA 305 (506)
T ss_dssp CCEEEEESCHHHHHHHHHHTTT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHH
T ss_pred CCEEEEECCHHHHHHHHHHhhh-cCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHH
Confidence 9999999999999999999887 799999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCC-CCceeecEEEecCCCccccc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA-KGYYIKPTVFTGVKDDMLIA 318 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~ 318 (423)
|+++|+++++++++|+|.|+++++||+++.++++++.+++++++++|+++++||...+. .|+|++|||+.+++++|+++
T Consensus 306 f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~ 385 (506)
T 3rh9_A 306 FGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCY 385 (506)
T ss_dssp HHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHH
T ss_pred HHHHHHHHHHhccCCCCcccCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhh
Confidence 99999999999999999999999999999999999999999999999999999986444 78999999999999999999
Q ss_pred ccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCc
Q 014515 319 KDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGRE 398 (423)
Q Consensus 319 ~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~ 398 (423)
+||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++....+.+||||+|+||+|++
T Consensus 386 ~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~ 465 (506)
T 3rh9_A 386 QEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGMKASGIGRE 465 (506)
T ss_dssp HSCCCSSEEEEEEECCHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCCCCTTSCBCCSGGGEESCB
T ss_pred cccccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCccCcCcCcCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999888888999999999999999
Q ss_pred chHHHHHhhheeeEEEEec
Q 014515 399 KGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 399 ~g~~~l~~~~~~k~v~~~~ 417 (423)
+|++|+++||+.|+|+++.
T Consensus 466 ~G~~gl~~ft~~K~v~~~~ 484 (506)
T 3rh9_A 466 GGLEGLFEFVEAQTVPRGF 484 (506)
T ss_dssp SHHHHHTTTEEEEEEEEC-
T ss_pred ccHHHHHHhcceEEEEEcC
Confidence 9999999999999998874
No 6
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=5.5e-94 Score=734.15 Aligned_cols=421 Identities=41% Similarity=0.741 Sum_probs=398.5
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccC---C-CCCCCceeE
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA---P-ADGPYHVQT 76 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~---~-~~~~~~~~~ 76 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++.. |+..+++.+++++.++++..+... + ...+...++
T Consensus 69 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (503)
T 3iwj_A 69 ASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAAW-DIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHV 147 (503)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceE
Confidence 47899999999999999999999999999999999999875 999999999999998876654331 1 113457889
Q ss_pred eeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhc
Q 014515 77 LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS 156 (423)
Q Consensus 77 ~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~ 156 (423)
.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++++++|++.+.++.|+.
T Consensus 148 ~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~ 227 (503)
T 3iwj_A 148 LREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLAT 227 (503)
T ss_dssp EEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHT
T ss_pred EEcCCceEEEECCCchHHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988889999999
Q ss_pred ccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCcc
Q 014515 157 HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 236 (423)
Q Consensus 157 ~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~ 236 (423)
||++|+|+||||+.+|+.|++.++. +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++
T Consensus 228 ~~~v~~I~FTGS~~~G~~i~~~aa~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i 306 (503)
T 3iwj_A 228 HPDVDKVAFTGSSATGSKIMTAAAQ-LVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESI 306 (503)
T ss_dssp CTTCCEEEEESCHHHHHHHHHHHGG-GTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTT
T ss_pred CCCccEEEEECcHHHHHHHHHHHhc-CCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHH
Confidence 9999999999999999999999887 789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC--CCCceeecEEEecCCCc
Q 014515 237 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDD 314 (423)
Q Consensus 237 ~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~--~~g~~~~Ptvl~~~~~~ 314 (423)
+|+|+++|+++++++++|+|.++++++||+++..+++++.+++++++++|+++++||...+ ..|+|++|||+.+++++
T Consensus 307 ~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~ 386 (503)
T 3iwj_A 307 ATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTN 386 (503)
T ss_dssp HHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTT
T ss_pred HHHHHHHHHHHHHhccCCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCC
Confidence 9999999999999999999999999999999999999999999999999999999998654 57899999999999999
Q ss_pred ccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCC
Q 014515 315 MLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSG 394 (423)
Q Consensus 315 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG 394 (423)
|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++...+.+||||+|.||
T Consensus 387 ~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG 466 (503)
T 3iwj_A 387 MQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSG 466 (503)
T ss_dssp SHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCCCCTTSCBCCSGGGE
T ss_pred chhhCceeeCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999987778899999999999
Q ss_pred CCCcchHHHHHhhheeeEEEEecC--CCCCC
Q 014515 395 QGREKGSYSLSNYLQVKAVVTALK--NPAWL 423 (423)
Q Consensus 395 ~g~~~g~~~l~~~~~~k~v~~~~~--~~~~~ 423 (423)
+|+++|.+|+++|++.|+|+++.. ...||
T Consensus 467 ~G~~~G~~g~~~f~~~k~v~~~~~~~~~~~~ 497 (503)
T 3iwj_A 467 FGRELGEWGLDNYLSVKQVTQYISEEPWGWY 497 (503)
T ss_dssp ECCBSHHHHHHTTEEEEEEEEECCSSCCCCS
T ss_pred CCCcchHHHHHHhhCeEEEEEeCCCCccccc
Confidence 999999999999999999998764 35576
No 7
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=4.8e-94 Score=736.76 Aligned_cols=421 Identities=41% Similarity=0.713 Sum_probs=400.4
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCC-CCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++. .|+..+++.+++++.++++..+...+.. .+...++.++
T Consensus 82 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (528)
T 3u4j_A 82 MSGAERSRLMFKVADLILARQEELALIESLEVGKPIAQAR-GEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLRE 160 (528)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEec
Confidence 5789999999999999999999999999999999999995 5999999999999999877765554433 4567899999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++|+++|.+.+.++.|+.||+
T Consensus 161 P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~ 240 (528)
T 3u4j_A 161 PVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPN 240 (528)
T ss_dssp ECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTT
T ss_pred cceEEEEECCCccHHHHHHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999988889999999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
||.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+
T Consensus 241 vd~I~FTGS~~~G~~i~~~aa~-~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~ 319 (528)
T 3u4j_A 241 VDMVAFTGSVRVGTKLGEIAAR-TVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDA 319 (528)
T ss_dssp CCEEEEESCHHHHHHHHHHHHT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHH
T ss_pred cCEEEEeCCHHHHHHHHHHHHh-cCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHH
Confidence 9999999999999999999887 899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCC-CCceeecEEEecCCCccccc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA-KGYYIKPTVFTGVKDDMLIA 318 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~ 318 (423)
|+++|+++++++++|+|.|+++++||+++.++++++.+++++++++|+++++||...+. .|+|++|||+.+++++|+++
T Consensus 320 f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~ 399 (528)
T 3u4j_A 320 LMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIA 399 (528)
T ss_dssp HHHHHHHHHHHCCEECTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHH
T ss_pred HHHHHHHHHHhhcCCCCCCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999987544 78999999999999999999
Q ss_pred ccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCc
Q 014515 319 KDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGRE 398 (423)
Q Consensus 319 ~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~ 398 (423)
+||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++...+.+||||+|.||+|++
T Consensus 400 ~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~ 479 (528)
T 3u4j_A 400 REEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRE 479 (528)
T ss_dssp HSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCB
T ss_pred cceeeccEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCcCCcCcCCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999888889999999999999999
Q ss_pred chHHHHHhhheeeEEEEecC-CCCCC
Q 014515 399 KGSYSLSNYLQVKAVVTALK-NPAWL 423 (423)
Q Consensus 399 ~g~~~l~~~~~~k~v~~~~~-~~~~~ 423 (423)
+|.+|+++|++.|+|+++.. ..+||
T Consensus 480 ~G~~gl~~ft~~K~v~~~~~~~~~~~ 505 (528)
T 3u4j_A 480 LGRYGFDEYSQFKGVHVTLGRPAPWF 505 (528)
T ss_dssp STTHHHHHTEEEEEEEEESSCCCCSC
T ss_pred chHHHHHHhhceEEEEEeCCCCCCcc
Confidence 99999999999999998863 34455
No 8
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=3.6e-94 Score=735.94 Aligned_cols=415 Identities=43% Similarity=0.803 Sum_probs=394.3
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCC----CCCCceeE
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA----DGPYHVQT 76 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~ 76 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||+.++...|+..+++.+++++.++++..+...+. ..+...+.
T Consensus 95 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~ 174 (517)
T 2o2p_A 95 INARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLT 174 (517)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEE
Confidence 57899999999999999999999999999999999999874599999999999999887766554332 22235689
Q ss_pred eeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhc
Q 014515 77 LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS 156 (423)
Q Consensus 77 ~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~ 156 (423)
.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+++|.+.+.++.|+.
T Consensus 175 ~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~ 254 (517)
T 2o2p_A 175 KKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSD 254 (517)
T ss_dssp EEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHH
T ss_pred EecCCccEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987889999999
Q ss_pred ccCcceEeeecCchHHHHHHHHHh-hCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCc
Q 014515 157 HMEVDKLAFTGSTTTGKIVLQLAA-KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 235 (423)
Q Consensus 157 ~~~v~~v~~tGs~~~~~~v~~~~a-~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~ 235 (423)
||+||+|+||||+.+|+.|++.++ + ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++
T Consensus 255 ~~~v~~V~FTGS~~~G~~I~~~aa~~-~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~ 333 (517)
T 2o2p_A 255 HPDVRKIGFTGSTEVGKHIMKSCALS-NVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEES 333 (517)
T ss_dssp CTTCCEEEEESCHHHHHHHHHHHHHH-TCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHH
T ss_pred CCCCCEEEEECCHHHHHHHHHHhHHh-cCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHH
Confidence 999999999999999999999988 6 89999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCcc
Q 014515 236 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDM 315 (423)
Q Consensus 236 ~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~ 315 (423)
++|+|+++|+++++++++|+|.|+++++||+++..+++++.+++++++++|+++++||...+..|+|++|||+.+++++|
T Consensus 334 i~d~f~~~l~~~~~~~~vGdp~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~ 413 (517)
T 2o2p_A 334 IHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHM 413 (517)
T ss_dssp HHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTS
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999998654468999999999999999
Q ss_pred cccccccccCeeEEEecCC--HHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCC
Q 014515 316 LIAKDEIFGPVQSILKYKD--LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQS 393 (423)
Q Consensus 316 ~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~S 393 (423)
++++||+||||++|++|+| +||||+++|+++|||++||||+|.++++++++++++|+|+||+++...+.+||||+|.|
T Consensus 414 ~i~~eEiFGPVl~v~~~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~S 493 (517)
T 2o2p_A 414 YIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQS 493 (517)
T ss_dssp GGGTSCCCSSEEEEEEECTTCSHHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCCGGG
T ss_pred hhhhccccccEEEEEEcCCCCHHHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCCCCCCCCcCCcCcC
Confidence 9999999999999999999 99999999999999999999999999999999999999999998777789999999999
Q ss_pred CCCCcchHHHHHhhheeeEEEEe
Q 014515 394 GQGREKGSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 394 G~g~~~g~~~l~~~~~~k~v~~~ 416 (423)
|+|+++|.+++++|++.|+|+++
T Consensus 494 G~Gr~~G~~~l~~~~~~k~v~~~ 516 (517)
T 2o2p_A 494 GFGKDLGEAALNEYLRIKTVTFE 516 (517)
T ss_dssp EECCBSHHHHHHTTEEEEEEEEE
T ss_pred CcCccChHHHHHHhCCceEEEee
Confidence 99999999999999999999875
No 9
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=8.4e-94 Score=731.28 Aligned_cols=418 Identities=57% Similarity=0.990 Sum_probs=396.6
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||+.++...|+..+++.+++++.++++..+...+...+...+..++|
T Consensus 80 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P 159 (501)
T 1bxs_A 80 MDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEP 159 (501)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeeccCCcceeEEecC
Confidence 57899999999999999999999999999999999998766799999999999999887776554333334567899999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++|+++|.+.+.++.|+.||+|
T Consensus 160 ~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v 239 (501)
T 1bxs_A 160 VGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDV 239 (501)
T ss_dssp CCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTC
T ss_pred CceEEEECCCcchHHHHHHHHHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999888899999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~f 240 (423)
|+|+||||+.+|+.|++.+++.+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|
T Consensus 240 ~~I~FTGS~~~G~~i~~~aa~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f 319 (501)
T 1bxs_A 240 DKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEF 319 (501)
T ss_dssp SEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHH
T ss_pred CEEEEECCHHHHHHHHHHhhhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHH
Confidence 99999999999999999998238999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCccccccc
Q 014515 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKD 320 (423)
Q Consensus 241 ~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~ 320 (423)
+++|+++++++++|+|.|+++++||+++..+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++|
T Consensus 320 ~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~e 399 (501)
T 1bxs_A 320 VRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKE 399 (501)
T ss_dssp HHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHS
T ss_pred HHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhc
Confidence 99999999999999999999999999999999999999999999999999999865446899999999999999999999
Q ss_pred ccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCcch
Q 014515 321 EIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKG 400 (423)
Q Consensus 321 E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g 400 (423)
|+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++...+.+||||+|.||+|+++|
T Consensus 400 EiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~pfGG~k~SG~G~~~G 479 (501)
T 1bxs_A 400 EIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELG 479 (501)
T ss_dssp CCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESCBSH
T ss_pred ccccceEEEEEeCCHHHHHHHHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCCCCCCCCCCCcCcCCcCccch
Confidence 99999999999999999999999999999999999999999999999999999999987777899999999999999999
Q ss_pred HHHHHhhheeeEEEEecC
Q 014515 401 SYSLSNYLQVKAVVTALK 418 (423)
Q Consensus 401 ~~~l~~~~~~k~v~~~~~ 418 (423)
.+|+++|++.|+|+++..
T Consensus 480 ~~~l~~f~~~K~v~~~~~ 497 (501)
T 1bxs_A 480 EYGFHEYTEVKTVTIKIS 497 (501)
T ss_dssp HHHHHTTEEEEEEEEECS
T ss_pred HHHHHHhhCeeEEEEccC
Confidence 999999999999988754
No 10
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=7.3e-94 Score=731.56 Aligned_cols=418 Identities=60% Similarity=1.014 Sum_probs=396.0
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||+.++...|+..+++.+++++.++++..+...+...+...+..++|
T Consensus 79 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P 158 (500)
T 1o04_A 79 MDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEP 158 (500)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceecCCCceEEEEEec
Confidence 57899999999999999999999999999999999998766699999999999999887765544333334567899999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++|+++|.+.+.++.|+.||+|
T Consensus 159 ~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v 238 (500)
T 1o04_A 159 VGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDV 238 (500)
T ss_dssp CCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTC
T ss_pred CCcEEEECCCCchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999778899999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~f 240 (423)
|+|+||||+.+|+.|++.++..++||+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|
T Consensus 239 ~~I~FTGS~~~G~~i~~~aa~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f 318 (500)
T 1o04_A 239 DKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEF 318 (500)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHH
T ss_pred CEEEEECCHHHHHHHHHhhhhhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHH
Confidence 99999999999999999998238999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCccccccc
Q 014515 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKD 320 (423)
Q Consensus 241 ~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~ 320 (423)
+++|+++++++++|+|.|+++++||+++..+++++.+++++++++|+++++||...+..|+|++|||+.+++++|++++|
T Consensus 319 ~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~e 398 (500)
T 1o04_A 319 VERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKE 398 (500)
T ss_dssp HHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHS
T ss_pred HHHHHHHHHhCcCCCcccccCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhC
Confidence 99999999999999999999999999999999999999999999999999999764446899999999999999999999
Q ss_pred ccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCcch
Q 014515 321 EIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKG 400 (423)
Q Consensus 321 E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g 400 (423)
|+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++...+.+||||+|.||+|+++|
T Consensus 399 EiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~~G 478 (500)
T 1o04_A 399 EIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELG 478 (500)
T ss_dssp CCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESCBST
T ss_pred cccceEEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccch
Confidence 99999999999999999999999999999999999999999999999999999999987777899999999999999999
Q ss_pred HHHHHhhheeeEEEEecC
Q 014515 401 SYSLSNYLQVKAVVTALK 418 (423)
Q Consensus 401 ~~~l~~~~~~k~v~~~~~ 418 (423)
.+|+++|++.|+|+++..
T Consensus 479 ~~gl~~f~~~K~v~~~~~ 496 (500)
T 1o04_A 479 EYGLQAYTEVKTVTVKVP 496 (500)
T ss_dssp GGGGGGGEEEEEEEEECS
T ss_pred HHHHHHhcceEEEEEecC
Confidence 999999999999988753
No 11
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=6.6e-94 Score=731.91 Aligned_cols=413 Identities=39% Similarity=0.652 Sum_probs=394.7
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCC-CCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..+++. |+..+++.+++++.+.++..+...+.. .+...++.++
T Consensus 89 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~ 167 (504)
T 3ek1_A 89 KTAKERAGILRKWFDLIIANADDIALIMTSEQGKPLAEARG-EVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQ 167 (504)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccccccccceeecc
Confidence 57899999999999999999999999999999999999876 999999999999998877665543322 3467889999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++|++++.+.+.++.|+.||+
T Consensus 168 P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~ 247 (504)
T 3ek1_A 168 PVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDT 247 (504)
T ss_dssp ECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTT
T ss_pred CceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999888889999999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
||.|+||||+.+|+.|++.+++ ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+
T Consensus 248 v~~V~FTGS~~~G~~i~~~aa~-~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~ 326 (504)
T 3ek1_A 248 VRKLSFTGSTEVGRLLMAQCAP-TIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDK 326 (504)
T ss_dssp CCEEEEESCHHHHHHHHHHHGG-GTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHH
T ss_pred cCEEEEECCHHHHHHHHHhhhh-hcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHH
Confidence 9999999999999999999987 789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCcccccc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAK 319 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~ 319 (423)
|+++|+++++++++|+|.|+++++||+++..+++++++++++++++|+++++||.. ..|+|++|||+.+++++|++++
T Consensus 327 f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~~g~~~~PTvl~~v~~~~~i~~ 404 (504)
T 3ek1_A 327 FAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE--LGGLFFEPGILTGVTSDMLVAK 404 (504)
T ss_dssp HHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE--EETTEECCEEEEEECTTSGGGT
T ss_pred HHHHHHHHHhhcccCCCccccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCCceECCeEEecCCCcChhhc
Confidence 99999999999999999999999999999999999999999999999999999976 3689999999999999999999
Q ss_pred cccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCcc
Q 014515 320 DEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREK 399 (423)
Q Consensus 320 ~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~ 399 (423)
||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.....+.+||||+|+||+|+++
T Consensus 405 eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~ 484 (504)
T 3ek1_A 405 EETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREG 484 (504)
T ss_dssp SCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSCCCCSSSCBCCSGGGEESCBS
T ss_pred ccccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcCcCcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999998777789999999999999999
Q ss_pred hHHHHHhhheeeEEEEec
Q 014515 400 GSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 400 g~~~l~~~~~~k~v~~~~ 417 (423)
|.+|+++|++.|+|++++
T Consensus 485 G~~gl~~~t~~K~v~~~~ 502 (504)
T 3ek1_A 485 SKYGIEEYLETKYICSAY 502 (504)
T ss_dssp TTTSGGGGEEEEEEEEEC
T ss_pred cHHHHHHhhceEEEEEec
Confidence 999999999999998864
No 12
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=8.7e-94 Score=730.67 Aligned_cols=415 Identities=34% Similarity=0.625 Sum_probs=396.1
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCC-CCCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++...|+..+++.+++++.++++..+...+. ..+...++.++
T Consensus 81 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (498)
T 4f3x_A 81 TTPAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRD 160 (498)
T ss_dssp CCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEc
Confidence 57899999999999999999999999999999999999834699999999999999887766554332 23567889999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|+++|++.+.++.|+.||+
T Consensus 161 P~GVv~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~ 239 (498)
T 4f3x_A 161 PIGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPK 239 (498)
T ss_dssp ECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTT
T ss_pred CcceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCC
Confidence 999999999999999999999999999999999999999999999999999999 9999999999988889999999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
||.|+||||+.+|+.|++.+++ ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+
T Consensus 240 v~~V~FTGS~~~G~~i~~~aa~-~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~ 318 (498)
T 4f3x_A 240 VGMVSITGDIATGKKVLAAAAK-TVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEK 318 (498)
T ss_dssp CCEEEEESCHHHHHHHHHHHHT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHH
T ss_pred cCEEEEECCHHHHHHHHHHHHh-hCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHH
Confidence 9999999999999999999987 899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCC-EEEeCCcccCCCCceeecEEEecCCCccccc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGA-KLETGGERLGAKGYYIKPTVFTGVKDDMLIA 318 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga-~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~ 318 (423)
|+++|+++++++++|+|.|+++++||+++..+++++.+++++++++|+ ++++||...+..|+|++|||+.+++++|+++
T Consensus 319 f~~~l~~~~~~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~ 398 (498)
T 4f3x_A 319 LVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIV 398 (498)
T ss_dssp HHHHHHHHHTTCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHH
T ss_pred HHHHHHHHHHhcccCCCccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhh
Confidence 999999999999999999999999999999999999999999999999 9999998765689999999999999999999
Q ss_pred ccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCc
Q 014515 319 KDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGRE 398 (423)
Q Consensus 319 ~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~ 398 (423)
+||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++...+.+||||+|.||+|++
T Consensus 399 ~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~ 478 (498)
T 4f3x_A 399 RREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGKD 478 (498)
T ss_dssp HSCCCSSEEEEEEECTTSCHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCSGGGEECCB
T ss_pred CCceeCcEEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCCcCcc
Confidence 99999999999999999999999999999999999999999999999999999999999887779999999999999999
Q ss_pred chHHHHHhhheeeEEEEec
Q 014515 399 KGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 399 ~g~~~l~~~~~~k~v~~~~ 417 (423)
+|.+|+++|++.|+|+++.
T Consensus 479 ~G~~~l~~~t~~k~v~~~~ 497 (498)
T 4f3x_A 479 MSVYALEDYTAVRHIMINH 497 (498)
T ss_dssp SHHHHHHHTEEEEEEEEEC
T ss_pred chHHHHHHhhceEEEEEeC
Confidence 9999999999999998763
No 13
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.9e-93 Score=728.20 Aligned_cols=414 Identities=37% Similarity=0.607 Sum_probs=393.7
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.+++++.++++..+...+...+...+..++|
T Consensus 67 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P 146 (495)
T 3b4w_A 67 TPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSYGQSIVSREP 146 (495)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEEETTEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCceEEEEEcc
Confidence 57899999999999999999999999999999999999874599999999999999887776654332233467899999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++++++| +.+.++.|++||+|
T Consensus 147 ~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v 225 (495)
T 3b4w_A 147 VGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDI 225 (495)
T ss_dssp CCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTC
T ss_pred CceEEEECCCcchHHHHHHHHHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999 88899999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~f 240 (423)
|.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|
T Consensus 226 ~~I~FTGS~~~G~~i~~~aa~-~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f 304 (495)
T 3b4w_A 226 DMFTFTGSSAVGREVGRRAAE-MLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEI 304 (495)
T ss_dssp CEEEEESCHHHHHHHHHHHHH-TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHH
T ss_pred CEEEEeCCHHHHHHHHHHhhh-cCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHH
Confidence 999999999999999999987 7899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC--CCCceeecEEEecCCCccccc
Q 014515 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIA 318 (423)
Q Consensus 241 ~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~ 318 (423)
+++|+++++++++|+|.|+++++||+++..+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|+++
T Consensus 305 ~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~ 384 (495)
T 3b4w_A 305 VAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIA 384 (495)
T ss_dssp HHHHHHHHHHSCBCCTTCTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHH
T ss_pred HHHHHHHHHhcCCCCCccCCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhh
Confidence 999999999999999999999999999999999999999999999999999997643 368999999999999999999
Q ss_pred ccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCc
Q 014515 319 KDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGRE 398 (423)
Q Consensus 319 ~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~ 398 (423)
+||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++ ..+.+||||+|.||+|++
T Consensus 385 ~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~-~~~~~PfGG~k~SG~Gr~ 463 (495)
T 3b4w_A 385 QEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA-FDPGSPFGGYKNSGIGRE 463 (495)
T ss_dssp HSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC-CCTTSCBCCSGGGEESCB
T ss_pred hcccccceEEEEecCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC-CCCCCCCCCCCCCCcCcc
Confidence 9999999999999999999999999999999999999999999999999999999999987 778999999999999999
Q ss_pred chHHHHHhhheeeEEEEec
Q 014515 399 KGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 399 ~g~~~l~~~~~~k~v~~~~ 417 (423)
+|.+|+++|++.|+|+++.
T Consensus 464 ~G~~gl~~~~~~k~v~~~~ 482 (495)
T 3b4w_A 464 NGPEGVEHFTQQKSVLLPM 482 (495)
T ss_dssp SHHHHHHTTEEEEEEECCT
T ss_pred chHHHHHHhcceeEEEEcc
Confidence 9999999999999998875
No 14
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=2.1e-93 Score=728.93 Aligned_cols=417 Identities=35% Similarity=0.577 Sum_probs=395.0
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCC-CCCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++.. |+..+++.+++++.++++..+...+. ..+...+..++
T Consensus 69 ~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (497)
T 3k2w_A 69 LTARTRQNMLRTFANKIRENKHILAPMLVAEQGKLLSVAEM-EVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKV 147 (497)
T ss_dssp SCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEc
Confidence 57899999999999999999999999999999999999884 99999999999999887766554332 24567889999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++|+++|++.+.++.|+.||+
T Consensus 148 P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~ 227 (497)
T 3k2w_A 148 PRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPI 227 (497)
T ss_dssp ECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSS
T ss_pred CCceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999988889999999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
||.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+
T Consensus 228 vd~I~fTGS~~~G~~i~~~aa~-~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~ 306 (497)
T 3k2w_A 228 TKMITMTGSTVAGKQIYKTSAE-YMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDE 306 (497)
T ss_dssp EEEEEEESCHHHHHHHHHHHTT-TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHH
T ss_pred cCEEEEECcHHHHHHHHHHhhh-cCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHH
Confidence 9999999999999999999987 799999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcc--cCC--CCceeecEEEecCCCcc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER--LGA--KGYYIKPTVFTGVKDDM 315 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~--~~~--~g~~~~Ptvl~~~~~~~ 315 (423)
|+++|+++++++++|+|.|+++++||+++..+++++.+++++++++|+++++||.. .+. .|+|++|||+.+++++|
T Consensus 307 f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~ 386 (497)
T 3k2w_A 307 FMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDN 386 (497)
T ss_dssp HHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTS
T ss_pred HHHHHHHHHHhccCCCCCCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCc
Confidence 99999999999999999999999999999999999999999999999999999973 332 68999999999999999
Q ss_pred cccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCC
Q 014515 316 LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 395 (423)
Q Consensus 316 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~ 395 (423)
++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++...+.+||||+|+||+
T Consensus 387 ~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~ 466 (497)
T 3k2w_A 387 IVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGF 466 (497)
T ss_dssp HHHHSCCCSSEEEEEEESCHHHHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCEETSEE
T ss_pred HhhcCCccCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCcCCcCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999888788999999999999
Q ss_pred CCcchHHHHHhhheeeEEEEecCC
Q 014515 396 GREKGSYSLSNYLQVKAVVTALKN 419 (423)
Q Consensus 396 g~~~g~~~l~~~~~~k~v~~~~~~ 419 (423)
|+++|.+|+++|++.|+|++++..
T Consensus 467 G~~~G~~gl~~ft~~k~v~~~~~~ 490 (497)
T 3k2w_A 467 GGEDGKFGLEQYLEKKTVYINEAE 490 (497)
T ss_dssp SCBSHHHHHHTTEEEEEEEEECCC
T ss_pred CccchHHHHHHhcceEEEEEEccc
Confidence 999999999999999999988753
No 15
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=1.3e-92 Score=725.49 Aligned_cols=415 Identities=41% Similarity=0.713 Sum_probs=394.6
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCC-CCCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++. .|+..+++.+++++.++++..+...+. ..+...++.++
T Consensus 83 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~ 161 (515)
T 2d4e_A 83 TKAKERKRYLLRIAELIEKHADELAVMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRV 161 (515)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEe
Confidence 5789999999999999999999999999999999999988 599999999999999887766654333 23456788999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++.+.++.|+.||+
T Consensus 162 P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~ 241 (515)
T 2d4e_A 162 PAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPL 241 (515)
T ss_dssp ECCCEEEECCSSSHHHHHHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTT
T ss_pred cCCceEEECCCCchhhhhhhhhhHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999977789999999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
||+|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+
T Consensus 242 vd~I~FTGS~~~G~~I~~~aa~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~ 320 (515)
T 2d4e_A 242 VPLLTLTGETETGKIVMRNAAD-HLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFED 320 (515)
T ss_dssp CCEEEEESCHHHHHHHHHHHGG-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHH
T ss_pred cCEEEEeCcHHHHHHHHHHHhh-cCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHH
Confidence 9999999999999999999987 799999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC--------CCCceeecEEEecC
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--------AKGYYIKPTVFTGV 311 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~--------~~g~~~~Ptvl~~~ 311 (423)
|+++|+++++++++|+|.|+++++||+++..+++++.++|++++++|+++++||.... ..|+|++|||+.+
T Consensus 321 f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~- 399 (515)
T 2d4e_A 321 FVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG- 399 (515)
T ss_dssp HHHHHHHHHHHCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-
T ss_pred HHHHHHHHHhhcccCCcccccCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-
Confidence 9999999999999999999999999999999999999999999999999999997643 2689999999999
Q ss_pred CCcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCC
Q 014515 312 KDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYK 391 (423)
Q Consensus 312 ~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~ 391 (423)
+++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++...+.+||||+|
T Consensus 400 ~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k 479 (515)
T 2d4e_A 400 ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVK 479 (515)
T ss_dssp CTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCCCCTTSCBCCSG
T ss_pred CCCChhhhccccCCceEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999987777899999999
Q ss_pred CCCCCCcchHHHHHhhheeeEEEEecC
Q 014515 392 QSGQGREKGSYSLSNYLQVKAVVTALK 418 (423)
Q Consensus 392 ~SG~g~~~g~~~l~~~~~~k~v~~~~~ 418 (423)
+||+|+++|.+|+++|++.|+|++++.
T Consensus 480 ~SG~Gr~~G~~gl~~~~~~K~v~~~~~ 506 (515)
T 2d4e_A 480 GSGDRREGGTYALDFYTDLKTIALPLR 506 (515)
T ss_dssp GGBCSCBSHHHHHHHHEEEEEEEEESS
T ss_pred CCCCCccchHHHHHHhCceeEEEEcCC
Confidence 999999999999999999999988763
No 16
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=1.1e-92 Score=721.85 Aligned_cols=414 Identities=38% Similarity=0.661 Sum_probs=395.0
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCC-CCCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++.. |+..+++.+++++.+..+..+...+. ..+...+.+++
T Consensus 66 ~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (481)
T 3jz4_A 66 LTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKG-EISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQ 144 (481)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEc
Confidence 57899999999999999999999999999999999999875 99999999999998876665544332 23567789999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++++++|++.+.++.|+.||+
T Consensus 145 P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~ 224 (481)
T 3jz4_A 145 PIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPL 224 (481)
T ss_dssp ECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTT
T ss_pred CccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999988889999999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
||.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+
T Consensus 225 v~~I~fTGS~~~g~~i~~~aa~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~ 303 (481)
T 3jz4_A 225 VRKLSFTGSTEIGRQLMEQCAK-DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDR 303 (481)
T ss_dssp EEEEEEESCHHHHHHHHHHHTT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHH
T ss_pred cCEEEEECCHHHHHHHHHHHhh-cCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHH
Confidence 9999999999999999999887 889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCcccccc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAK 319 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~ 319 (423)
|+++|+++++++++|+|.|+++++||+++..+++++++++++++++|+++++||...+..|+|++|||+.+++++|++++
T Consensus 304 f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~ 383 (481)
T 3jz4_A 304 FAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSK 383 (481)
T ss_dssp HHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGT
T ss_pred HHHHHHHHHHhccCCCCccCcCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCccccc
Confidence 99999999999999999999999999999999999999999999999999999987555689999999999999999999
Q ss_pred cccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCcc
Q 014515 320 DEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREK 399 (423)
Q Consensus 320 ~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~ 399 (423)
||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||++....+.+||||+|+||+|+++
T Consensus 384 eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~ 463 (481)
T 3jz4_A 384 EETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREG 463 (481)
T ss_dssp SCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCSGGGEESCBS
T ss_pred ccccCceEEEEEECCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCcccCcCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999998777889999999999999999
Q ss_pred hHHHHHhhheeeEEEEe
Q 014515 400 GSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 400 g~~~l~~~~~~k~v~~~ 416 (423)
|.+|+++||+.|+|++.
T Consensus 464 g~~g~~~~t~~k~v~~~ 480 (481)
T 3jz4_A 464 SKYGIEDYLEIKYMCIG 480 (481)
T ss_dssp HHHHHHTTEEEEEEEEE
T ss_pred hHHHHHHhhceeEEEEe
Confidence 99999999999999875
No 17
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=1.2e-92 Score=727.85 Aligned_cols=415 Identities=35% Similarity=0.567 Sum_probs=394.3
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHH-hhhhcCccCCCCCCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW-ADKIQGLTAPADGPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..++.. |+..+++.+++++.+ .+...++..+...+...+..++
T Consensus 93 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (538)
T 3qan_A 93 VNPEERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEADA-DTAEAIDFLEYYARQMIELNRGKEILSRPGEQNRYFYT 171 (538)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHTCBCCCCCTTEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCeeecccCCcceeeecC
Confidence 57899999999999999999999999999999999999986 999999999999988 5556665554444677899999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++++++|++.+.++.|+.||+
T Consensus 172 P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~ 251 (538)
T 3qan_A 172 PMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPK 251 (538)
T ss_dssp ECCEEEEECCSTTTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTT
T ss_pred CCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999988889999999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCC------CCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEe
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSN------LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVH 233 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~------~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~ 233 (423)
||.|+||||+.+|+.|++.++. + ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||
T Consensus 252 v~~I~FTGS~~~G~~i~~~aa~-~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~ 330 (538)
T 3qan_A 252 TSLITFTGSKDVGVRLYERAAV-VRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIH 330 (538)
T ss_dssp EEEEEEESCHHHHHHHHHHHTS-CCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEE
T ss_pred cCEEEEECCHHHHHHHHHHhhh-ccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEe
Confidence 9999999999999999999887 5 89999999999999999999999999999999999999999999999999
Q ss_pred CccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCC
Q 014515 234 ESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKD 313 (423)
Q Consensus 234 ~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~ 313 (423)
++++|+|+++|+++++++++|+|.|+++++||+++..+++++.++|++++++| ++++||...+..|+|++|||+.++++
T Consensus 331 ~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v~~ 409 (538)
T 3qan_A 331 KDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDP 409 (538)
T ss_dssp TTTHHHHHHHHHHHHTTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECSSSCEECCEEEESCCT
T ss_pred hHHHHHHHHHHHHHHHhccCCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCCCCceeCCeeeecCCC
Confidence 99999999999999999999999999999999999999999999999999999 99999987544799999999999999
Q ss_pred cccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEc-CcCCC-CCCCCCCCCC
Q 014515 314 DMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN-CFDVF-DAAIPFGGYK 391 (423)
Q Consensus 314 ~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN-~~~~~-~~~~pfgG~~ 391 (423)
+|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+|| ++... .+.+||||+|
T Consensus 410 ~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k 489 (538)
T 3qan_A 410 EAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFK 489 (538)
T ss_dssp TSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEE
T ss_pred CChhhCCCcCCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcC
Confidence 999999999999999999999999999999999999999999999999999999999999999 55544 7889999999
Q ss_pred CCCCC-CcchHHHHHhhheeeEEEEecC
Q 014515 392 QSGQG-REKGSYSLSNYLQVKAVVTALK 418 (423)
Q Consensus 392 ~SG~g-~~~g~~~l~~~~~~k~v~~~~~ 418 (423)
.||+| +++|.+|+++|++.|+|+++..
T Consensus 490 ~SG~G~~~~G~~gl~~ft~~k~v~~~~~ 517 (538)
T 3qan_A 490 MSGTDSKAGGPDYLALHMQAKTVSEMYA 517 (538)
T ss_dssp TTBSCCCBTSTTTGGGGEEEEEEEEEC-
T ss_pred cCCCCcccccHHHHHHhhCeEEEEEecC
Confidence 99999 9999999999999999988863
No 18
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=4.4e-93 Score=726.93 Aligned_cols=414 Identities=39% Similarity=0.727 Sum_probs=393.0
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||+.++.. |+..+++.+++++.++++..++..+...+...++.++|
T Consensus 77 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P 155 (503)
T 1a4s_A 77 MAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAEY-DIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREP 155 (503)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccCCCCceeEEEEec
Confidence 57899999999999999999999999999999999999865 99999999999999887765543332233467889999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|.+ +.++.|+.||+|
T Consensus 156 ~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v 234 (503)
T 1a4s_A 156 LGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNV 234 (503)
T ss_dssp CSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTC
T ss_pred CceEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999977 889999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~f 240 (423)
|+|+||||+.+|+.|++.+++ ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|
T Consensus 235 ~~V~FTGS~~~G~~i~~~aa~-~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f 313 (503)
T 1a4s_A 235 AKVSFTGSVPTGKKVMEMSAK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQF 313 (503)
T ss_dssp CEEEEESCHHHHHHHHHHHHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHH
T ss_pred CEEEEeCCHHHHHHHHHHhhh-cCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHH
Confidence 999999999999999999987 8999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccc--C----CCCceeecEEEecCCCc
Q 014515 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL--G----AKGYYIKPTVFTGVKDD 314 (423)
Q Consensus 241 ~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~--~----~~g~~~~Ptvl~~~~~~ 314 (423)
+++|+++++++++|+|.|+++++||+++..+++++.+++++++++|+++++||... + ..|+|++|||+.+++++
T Consensus 314 ~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~ 393 (503)
T 1a4s_A 314 LEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDD 393 (503)
T ss_dssp HHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTT
T ss_pred HHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCC
Confidence 99999999999999999999999999999999999999999999999999999764 2 35899999999999999
Q ss_pred ccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCC
Q 014515 315 MLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSG 394 (423)
Q Consensus 315 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG 394 (423)
|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++....+.+||||+|+||
T Consensus 394 ~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG 473 (503)
T 1a4s_A 394 MTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSG 473 (503)
T ss_dssp SHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGE
T ss_pred CHHHhccccCceEEEEecCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCCCCCCCCCCCcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999987777889999999999
Q ss_pred CCCcchHHHHHhhheeeEEEEec
Q 014515 395 QGREKGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 395 ~g~~~g~~~l~~~~~~k~v~~~~ 417 (423)
+|+++|.+|+++|++.|+|+++.
T Consensus 474 ~G~~~G~~~l~~f~~~k~v~~~~ 496 (503)
T 1a4s_A 474 FGRENGQATVDYYSQLKTVIVEM 496 (503)
T ss_dssp ECCBSTTGGGGGSEEEEEEEECC
T ss_pred CCccchHHHHHHhcCceEEEEcc
Confidence 99999999999999999998864
No 19
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=2.8e-93 Score=729.43 Aligned_cols=411 Identities=41% Similarity=0.714 Sum_probs=392.3
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhh----hcCccCCCCCCCceeE
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK----IQGLTAPADGPYHVQT 76 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~ 76 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++ |+..+++.+++++.+.++ ..+...+...+. .+.
T Consensus 71 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~~~~~-~~~ 146 (517)
T 3r31_A 71 MSPMARGRILKRAADIMRERNDALSTLETLDTGKPIQET---IVADPTSGADAFEFFGGIAPSALNGDYIPLGGDF-AYT 146 (517)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHHHHHHHHHTCCCEEECSSSE-EEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHhhhccccccCcccccCCCc-ceE
Confidence 578999999999999999999999999999999999887 899999999999998877 666554433445 899
Q ss_pred eeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhc
Q 014515 77 LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS 156 (423)
Q Consensus 77 ~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~ 156 (423)
+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++++++| +.+.++.|+.
T Consensus 147 ~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~ 225 (517)
T 3r31_A 147 KRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQG-DRDTGPLLVN 225 (517)
T ss_dssp EEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCC-CTTHHHHHHT
T ss_pred EEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEEC-CHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999999999999 7889999999
Q ss_pred ccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCcc
Q 014515 157 HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 236 (423)
Q Consensus 157 ~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~ 236 (423)
||+||.|+||||+.+|+.|++.+++ ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++
T Consensus 226 ~p~vd~I~FTGS~~~G~~i~~~aa~-~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i 304 (517)
T 3r31_A 226 HPDVAKVSLTGSVPTGRKVAAAAAG-HLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKA 304 (517)
T ss_dssp CTTEEEEEEESCHHHHHHHHHHHHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGG
T ss_pred CCCcCEEeccCCHHHHHHHHHHhhc-CCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHH
Confidence 9999999999999999999999988 899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC---CCCceeecEEEecCCC
Q 014515 237 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG---AKGYYIKPTVFTGVKD 313 (423)
Q Consensus 237 ~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~---~~g~~~~Ptvl~~~~~ 313 (423)
+|+|+++|+++++++++|+|.|+++++||+++.++++++.++|++++++|+++++||...+ ..|+|++|||+.++++
T Consensus 305 ~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~ 384 (517)
T 3r31_A 305 KARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTD 384 (517)
T ss_dssp HHHHHHHHHHHHHHCCBCCTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECT
T ss_pred HHHHHHHHHHHHHhccCCCCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCC
Confidence 9999999999999999999999999999999999999999999999999999999993122 3689999999999999
Q ss_pred cccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCC
Q 014515 314 DMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQS 393 (423)
Q Consensus 314 ~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~S 393 (423)
+|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++...+.+||||+|.|
T Consensus 385 ~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~S 464 (517)
T 3r31_A 385 DMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQS 464 (517)
T ss_dssp TSHHHHSCCSSSEEEEEEECCHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCCCCTTSCBCCEETT
T ss_pred CCccccceeeccEEEEEEeCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999998888899999999999
Q ss_pred CCCCcchHHHHHhhheeeEEEEec
Q 014515 394 GQGREKGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 394 G~g~~~g~~~l~~~~~~k~v~~~~ 417 (423)
|+|+++|++|+++|++.|+|+++.
T Consensus 465 G~Gr~~G~~gl~~ft~~K~v~~~~ 488 (517)
T 3r31_A 465 GFGRENSAAALEHYSELKTVYVST 488 (517)
T ss_dssp EECCBSTGGGGGGSEEEEEEEECC
T ss_pred CCCcCchHHHHHHhhceEEEEEcC
Confidence 999999999999999999998875
No 20
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=1e-92 Score=722.28 Aligned_cols=413 Identities=36% Similarity=0.644 Sum_probs=391.8
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCC-CCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.+++++.++++..++..+.. .+...+..++
T Consensus 79 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~ 158 (495)
T 1wnd_A 79 TTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRD 158 (495)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeee
Confidence 578999999999999999999999999999999999998755999999999999998877655443322 2345688999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..|++++.++ +|+|++|+++|++.+.++.|++||+
T Consensus 159 P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~ 237 (495)
T 1wnd_A 159 PLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPK 237 (495)
T ss_dssp ECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTT
T ss_pred cCCeEEEECCCcchHHHHHHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCC
Confidence 999999999999999999999999999999999999999999999999999999 9999999999977889999999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
||.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+
T Consensus 238 vd~I~FTGS~~~G~~i~~~aa~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~ 316 (495)
T 1wnd_A 238 VRMVSLTGSIATGEHIISHTAS-SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDT 316 (495)
T ss_dssp EEEEEEESCHHHHHHHHHHHGG-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHH
T ss_pred cCEEEEECcHHHHHHHHHHHHh-cCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHH
Confidence 9999999999999999999987 789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCC-CEEEeCCc-ccCCCCceeecEEEecCCCcccc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG-AKLETGGE-RLGAKGYYIKPTVFTGVKDDMLI 317 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~g-a~~~~gg~-~~~~~g~~~~Ptvl~~~~~~~~~ 317 (423)
|+++|+++++++++|+|.|+++++||+++..+++++.+++++++++| +++++||. .. ..|+|++|||+.+++++|++
T Consensus 317 f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-~~g~~~~PTvl~~v~~~~~i 395 (495)
T 1wnd_A 317 LVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-GNGYYYAPTLLAGALQDDAI 395 (495)
T ss_dssp HHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-SSSCCBCCEEEECCCTTSHH
T ss_pred HHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-CCCCeeCCEEEeCCCCCChh
Confidence 99999999999999999999999999999999999999999999999 99999997 53 26899999999999999999
Q ss_pred cccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCC
Q 014515 318 AKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGR 397 (423)
Q Consensus 318 ~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~ 397 (423)
++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++...+.+||||+|.||+|+
T Consensus 396 ~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr 475 (495)
T 1wnd_A 396 VQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGK 475 (495)
T ss_dssp HHSCCCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSCBCCSGGGEECC
T ss_pred hhccccCceEEEEEeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCCcCcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999987777899999999999999
Q ss_pred cchHHHHHhhheeeEEEEe
Q 014515 398 EKGSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 398 ~~g~~~l~~~~~~k~v~~~ 416 (423)
++|.+|+++|++.|+|+++
T Consensus 476 ~~G~~gl~~f~~~k~v~~~ 494 (495)
T 1wnd_A 476 DMSLYGLEDYTVVRHVMVK 494 (495)
T ss_dssp BSHHHHHHTTEEEEEEEEE
T ss_pred cchHHHHHHhhCeEEEEec
Confidence 9999999999999999875
No 21
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=1.8e-92 Score=719.94 Aligned_cols=414 Identities=34% Similarity=0.606 Sum_probs=392.6
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCC-CCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..++. .|+..+++.+++++.+.++..+...+.. .+...+..++
T Consensus 63 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (479)
T 2imp_A 63 LPAIERASWLRKISAGIRERASEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKR 141 (479)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEe
Confidence 5789999999999999999999999999999999999987 4999999999999988776655543322 2446789999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++++++|++.+.++.|+.||+
T Consensus 142 P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~ 221 (479)
T 2imp_A 142 ALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPK 221 (479)
T ss_dssp ECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTT
T ss_pred ccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999977778999999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
+|+|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+
T Consensus 222 v~~V~fTGS~~~g~~i~~~aa~-~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~ 300 (479)
T 2imp_A 222 VAMVSMTGSVSAGEKIMATAAK-NITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQ 300 (479)
T ss_dssp EEEEEEESCHHHHHHHHHHHHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHH
T ss_pred cCEEEEeCCHHHHHHHHHHHhc-cCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHH
Confidence 9999999999999999999987 899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCC-CCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCccccc
Q 014515 240 FVEKANALAMKRVVGDPFK-GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIA 318 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~-~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~ 318 (423)
|+++|+++++++++|+|.| +++++||+++..+++++.+++++++++|+++++||...+..|+|++|||+.+++++|+++
T Consensus 301 f~~~l~~~~~~~~~g~p~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~ 380 (479)
T 2imp_A 301 FVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIM 380 (479)
T ss_dssp HHHHHHHHHHTCCBSCTTTCSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGG
T ss_pred HHHHHHHHHHhcccCCccccCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHH
Confidence 9999999999999999999 999999999999999999999999999999999997643468999999999999999999
Q ss_pred ccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCc
Q 014515 319 KDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGRE 398 (423)
Q Consensus 319 ~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~ 398 (423)
+||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||++....+.+||||+|.||+|++
T Consensus 381 ~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~ 460 (479)
T 2imp_A 381 HEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGA 460 (479)
T ss_dssp GSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCEETTEESCB
T ss_pred hCccCCceEEEEeeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCCCCCCCCCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999777678999999999999999
Q ss_pred chHHHHHhhheeeEEEEe
Q 014515 399 KGSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 399 ~g~~~l~~~~~~k~v~~~ 416 (423)
+|.+|+++|++.|+|+++
T Consensus 461 ~g~~~l~~~~~~k~v~~~ 478 (479)
T 2imp_A 461 DGKHGLHEYLQTQVVYLQ 478 (479)
T ss_dssp SHHHHHHTTEEEEEEEEE
T ss_pred chHHHHHHhcCeeEEEec
Confidence 999999999999999764
No 22
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=8.9e-93 Score=724.39 Aligned_cols=410 Identities=36% Similarity=0.515 Sum_probs=388.9
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCC--C----CCce
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD--G----PYHV 74 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~----~~~~ 74 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++.. |+..+++.+++++.+.++..+...+.. . +...
T Consensus 68 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~ 146 (505)
T 3prl_A 68 RPIHERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSAIG-EVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIA 146 (505)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccccccccCCcee
Confidence 57899999999999999999999999999999999999986 999999999999998877655433211 1 3457
Q ss_pred eEeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHh
Q 014515 75 QTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAAL 154 (423)
Q Consensus 75 ~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l 154 (423)
++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++++++|++.+.++.|
T Consensus 147 ~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L 226 (505)
T 3prl_A 147 LVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHL 226 (505)
T ss_dssp EEEEEECSEEEEEECSSSTTHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHH
T ss_pred EEEEcCCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999888899999
Q ss_pred hcccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeC
Q 014515 155 ASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHE 234 (423)
Q Consensus 155 ~~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~ 234 (423)
+.||+||.|+||||+.+|+.|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+
T Consensus 227 ~~~p~vd~I~FTGS~~~G~~i~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~ 303 (505)
T 3prl_A 227 VEHPGIDMITFTGGTTTGERISEKAK---MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQD 303 (505)
T ss_dssp HTCTTCCEEEEESCHHHHHHHHHHCC---SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEH
T ss_pred HhCCCCCEEEEeCCHHHHHHHHHHcc---CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeH
Confidence 99999999999999999999999876 799999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCc
Q 014515 235 SVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDD 314 (423)
Q Consensus 235 ~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~ 314 (423)
+++|+|+++|+++++++++|+|. +++++||+++..+++++.+++++++++|+++++||.. .|+|++|||+.+++++
T Consensus 304 ~i~d~f~~~l~~~~~~~~~g~p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~---~g~~~~PTvl~~v~~~ 379 (505)
T 3prl_A 304 SVADQLVANIKELVEQLTVGSPE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR---QGNLLSPTLLDDVTPA 379 (505)
T ss_dssp HHHHHHHHHHHHHHHHCCBSCTT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTT
T ss_pred HHHHHHHHHHHHHHHhcccCCCC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCceeCCeEeecCCCC
Confidence 99999999999999999999999 9999999999999999999999999999999999974 5899999999999999
Q ss_pred ccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC-CCCCCCCCCCCCC
Q 014515 315 MLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQS 393 (423)
Q Consensus 315 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~pfgG~~~S 393 (423)
|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++. ..+.+||||+|.|
T Consensus 380 ~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~PFGG~k~S 459 (505)
T 3prl_A 380 MRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKS 459 (505)
T ss_dssp SGGGTSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCCSCSTTSCBCCEETT
T ss_pred ChhhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCCCCCCCCCcCCcCcC
Confidence 999999999999999999999999999999999999999999999999999999999999999765 4578999999999
Q ss_pred CCCCcchHHHHHhhheeeEEEEecC
Q 014515 394 GQGREKGSYSLSNYLQVKAVVTALK 418 (423)
Q Consensus 394 G~g~~~g~~~l~~~~~~k~v~~~~~ 418 (423)
|+|+++|.+|+++|++.|+|+++..
T Consensus 460 G~Gr~~g~~~~~~f~~~k~v~~~~~ 484 (505)
T 3prl_A 460 GLGVQGIKPSLLSMTRERVTVLNLA 484 (505)
T ss_dssp EESCBSHHHHHHHTEEEEEEEEEC-
T ss_pred CCCcCccHHHHHHhhceEEEEEeCC
Confidence 9999999999999999999988864
No 23
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=3.9e-92 Score=719.88 Aligned_cols=417 Identities=44% Similarity=0.756 Sum_probs=397.7
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..+++..|+..+++.+++++.+.++..+...+...+...++.++|
T Consensus 63 ~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P 142 (490)
T 2ve5_A 63 MTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREP 142 (490)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeeEeecc
Confidence 57899999999999999999999999999999999999875699999999999999887765554443345678899999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..|.+++.++|+|+|+++++++++.+.++.|+.||+|
T Consensus 143 ~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v 222 (490)
T 2ve5_A 143 LGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLI 222 (490)
T ss_dssp CSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTC
T ss_pred ccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHHhCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999888899999999999
Q ss_pred ceEeeecCchHHHHHHHHH-hhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLA-AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~-a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
|.|+||||+.+|+.|++.+ ++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+
T Consensus 223 d~v~fTGS~~~g~~i~~~a~a~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~ 301 (490)
T 2ve5_A 223 EKISFTGGTSTGKKVMASASSS-SLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQAR 301 (490)
T ss_dssp CEEEEESCHHHHHHHHHHHHHH-HCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHH
T ss_pred CEEEEeCCcHHHHHHHHhchhc-cccceEEEcCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCccCCCeEEEcHHHHHH
Confidence 9999999999999999998 76 789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC----CCCceeecEEEecCCCcc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDM 315 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~ 315 (423)
|+++|+++++++++|+|.|+++++||+++..+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|
T Consensus 302 f~~~l~~~~~~~~~g~p~d~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~ 381 (490)
T 2ve5_A 302 FEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDM 381 (490)
T ss_dssp HHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTS
T ss_pred HHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceEccEEEecCCCCC
Confidence 9999999999999999999999999999999999999999999999999999998632 368999999999999999
Q ss_pred cccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCC
Q 014515 316 LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 395 (423)
Q Consensus 316 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~ 395 (423)
++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||+++...+.+||||+|.||+
T Consensus 382 ~i~~eEiFGPvl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~pfGG~k~SG~ 461 (490)
T 2ve5_A 382 TIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGV 461 (490)
T ss_dssp HHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEE
T ss_pred ccccceeeCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999887788999999999999
Q ss_pred CCcchHHHHHhhheeeEEEEecC
Q 014515 396 GREKGSYSLSNYLQVKAVVTALK 418 (423)
Q Consensus 396 g~~~g~~~l~~~~~~k~v~~~~~ 418 (423)
|+++|.+++++|++.|+|+++..
T Consensus 462 G~~~G~~~~~~f~~~k~v~~~~~ 484 (490)
T 2ve5_A 462 GRENGLTTLAHYTRIKSVQVELG 484 (490)
T ss_dssp SCBSHHHHHHTTEEEEEEEEECS
T ss_pred CCcchHHHHHHhheeEEEEEccC
Confidence 99999999999999999998864
No 24
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=5e-92 Score=717.51 Aligned_cols=410 Identities=34% Similarity=0.575 Sum_probs=385.8
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEe-ec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTL-HE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 79 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..+++..|+..+++.+++++............ ..+...++. ++
T Consensus 82 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~ 160 (497)
T 3i44_A 82 TSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEAL-IEGNEQAILHYD 160 (497)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEES-STTCSSCEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhcccccccc-cCCceeEEEeec
Confidence 5789999999999999999999999999999999999998559999999999998876554332211 123446777 99
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++|+++|++.+.++.|+.||+
T Consensus 161 P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~ 240 (497)
T 3i44_A 161 AIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPD 240 (497)
T ss_dssp ECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTT
T ss_pred CceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999988889999999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
||.|+||||+.+|+.|++.+++ ++||+++|+|||||+||++||| +.|++.+++++|.|+||.|+++++||||++++|+
T Consensus 241 v~~I~FTGS~~~G~~i~~~aa~-~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~ 318 (497)
T 3i44_A 241 LEMISFTGSTRAGKDISKNASN-TLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDK 318 (497)
T ss_dssp CCEEEEESCHHHHHHHHHHHHT-TTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHH
T ss_pred cCEEEEeCcHHHHHHHHHHHhh-cCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHH
Confidence 9999999999999999999987 8899999999999999999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCc-ccC--CCCceeecEEEecCCCccc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE-RLG--AKGYYIKPTVFTGVKDDML 316 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~-~~~--~~g~~~~Ptvl~~~~~~~~ 316 (423)
|+++|+++++++++|+|.|+++++||+++..++++++++|++++++|+++++||. ..+ ..|+|++|||+.+++++|+
T Consensus 319 f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~ 398 (497)
T 3i44_A 319 AIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMR 398 (497)
T ss_dssp HHHHHHHHHHHCCBCCTTSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSH
T ss_pred HHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCH
Confidence 9999999999999999999999999999999999999999999999999999994 332 2689999999999999999
Q ss_pred ccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCC
Q 014515 317 IAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG 396 (423)
Q Consensus 317 ~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g 396 (423)
+++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||. ....+.+||||+|.||+|
T Consensus 399 i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~-~~~~~~~PfGG~k~SG~G 477 (497)
T 3i44_A 399 IFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNG-HELPGGSYFGGVKFSGRA 477 (497)
T ss_dssp HHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETT-CCCCTTCCBCCSGGGCCC
T ss_pred HHcCcccCceEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCC
Confidence 9999999999999999999999999999999999999999999999999999999999994 556788999999999999
Q ss_pred CcchHHHHHhhheeeEEE
Q 014515 397 REKGSYSLSNYLQVKAVV 414 (423)
Q Consensus 397 ~~~g~~~l~~~~~~k~v~ 414 (423)
+++|.+|+++|++.|+|+
T Consensus 478 r~~G~~gl~~~t~~K~v~ 495 (497)
T 3i44_A 478 REGGLWGIKEFLDTKAIS 495 (497)
T ss_dssp CBSHHHHHHTTEEEEEES
T ss_pred ccchHHHHHHhcceeEEE
Confidence 999999999999999874
No 25
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=9.7e-92 Score=712.42 Aligned_cols=413 Identities=31% Similarity=0.490 Sum_probs=393.7
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..+++. |+..+++.+++++.+.++..+.......+...++.++|
T Consensus 48 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P 126 (462)
T 3etf_A 48 TSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIKQARA-EVTKSAALCDWYAEHGPAMLNPEPTLVENQQAVIEYRP 126 (462)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHTSCEECSSGGGCEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHhHHHhcCCcccCCCCceeEEEeec
Confidence 57899999999999999999999999999999999999875 99999999999999887766554222234567899999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++.++.+++.++|+|+|+++++++ +.+.+..|+.||++
T Consensus 127 ~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aglP~gv~~vv~g-~~~~~~~l~~~~~v 205 (462)
T 3etf_A 127 LGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQMIARILAEAGTPAGVYGWVNA-NNEGVSQMINDPRI 205 (462)
T ss_dssp CSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHTTCCBTTEEECCC-CHHHHHHHHTSTTE
T ss_pred CcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcCeEEEEEC-CHHHHHHHhcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999998 56778899999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~f 240 (423)
+.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|
T Consensus 206 ~~v~fTGS~~~g~~i~~~aa~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f 284 (462)
T 3etf_A 206 AAVTVTGSVRAGAAIGAQAGA-ALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAF 284 (462)
T ss_dssp EEEEEESCHHHHHHHHHHHHH-TTCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHH
T ss_pred CEEEEeCCchHHHHHHHHHhc-cCCceEEEcCCCCccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHH
Confidence 999999999999999999988 7899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCccccccc
Q 014515 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKD 320 (423)
Q Consensus 241 ~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~ 320 (423)
+++|+++++++++|+|.++++++||+++..+++++.+++++++++|+++++||...+..|+|++|||+.++++++++++|
T Consensus 285 ~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~e 364 (462)
T 3etf_A 285 TDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQ 364 (462)
T ss_dssp HHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHS
T ss_pred HHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcC
Confidence 99999999999999999999999999999999999999999999999999999866667999999999999999999999
Q ss_pred ccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCcch
Q 014515 321 EIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKG 400 (423)
Q Consensus 321 E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g 400 (423)
|+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++...+.+||||+|.||+|+++|
T Consensus 365 E~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~g 444 (462)
T 3etf_A 365 ELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAARLECGGVFINGYSASDARVAFGGVKKSGFGRELS 444 (462)
T ss_dssp CCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEECSCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCSGGGEECCBSH
T ss_pred ceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcCCCCCCccch
Confidence 99999999999999999999999999999999999999999999999999999999988778899999999999999999
Q ss_pred HHHHHhhheeeEEEEe
Q 014515 401 SYSLSNYLQVKAVVTA 416 (423)
Q Consensus 401 ~~~l~~~~~~k~v~~~ 416 (423)
.+|+++||+.|+|+++
T Consensus 445 ~~g~~~~~~~k~v~~~ 460 (462)
T 3etf_A 445 HFGLHEFCNVQTVWKN 460 (462)
T ss_dssp HHHHHTTEEEEEEEEC
T ss_pred HHHHHHHhceeEEEEe
Confidence 9999999999999875
No 26
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=6.1e-92 Score=715.02 Aligned_cols=407 Identities=32% Similarity=0.571 Sum_probs=388.2
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++.. |+..+++.+++++.++++..+...+.. +...+..++|
T Consensus 53 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~P 130 (486)
T 3pqa_A 53 LPITKRYNILMNIAKQIKEKKEELAKILAIDAGKPIKQARV-EVERSIGTFKLAAFYVKEHRDEVIPSD-DRLIFTRREP 130 (486)
T ss_dssp CCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHCCEEEECCT-TEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCceecCC-CceeEEEEcc
Confidence 57899999999999999999999999999999999999875 999999999999998887765544433 5678899999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHc----CCCCCcEEEEeCCchhHHHHhhc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALAS 156 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~a----g~P~g~v~~v~~~~~~~~~~l~~ 156 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ |+|+|++++++|++.+.++.|+.
T Consensus 131 ~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~ 210 (486)
T 3pqa_A 131 VGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVV 210 (486)
T ss_dssp CSEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHH
T ss_pred ccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999 99999999999988888999999
Q ss_pred ccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCcc
Q 014515 157 HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 236 (423)
Q Consensus 157 ~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~ 236 (423)
||+||.|+||||+.+|+.|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++
T Consensus 211 ~p~vd~V~fTGS~~~g~~i~~~aa---~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i 287 (486)
T 3pqa_A 211 NEKVNMISFTGSSKVGELITKKAG---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESI 287 (486)
T ss_dssp CTTCCEEEEESCHHHHHHHHHHCC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGG
T ss_pred CCCccEEEEECChHHHHHHHHHcC---CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHH
Confidence 999999999999999999998765 79999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCccc
Q 014515 237 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDML 316 (423)
Q Consensus 237 ~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~ 316 (423)
+|+|+++|+++++++++|+|.|+++++||+++..+++++.+++++++++|+++++||.. .|+|++|||+ +++++|+
T Consensus 288 ~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl-~v~~~~~ 363 (486)
T 3pqa_A 288 ADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR---DKALFYPTIL-EVDRDNI 363 (486)
T ss_dssp HHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEE-ECCTTSG
T ss_pred HHHHHHHHHHHHHhcccCCCCcCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCcEeccEEE-eCCCCCh
Confidence 99999999999999999999999999999999999999999999999999999999975 5899999999 9999999
Q ss_pred ccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC-CCCCCCCCCCCCCC
Q 014515 317 IAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQ 395 (423)
Q Consensus 317 ~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG~ 395 (423)
+++||+||||++|++|+| ||||+++|+++|||++||||+|.++++++++++++|+|+||+++.. .+.+||||+|+||+
T Consensus 364 i~~eEiFGPVl~v~~~~~-deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~ 442 (486)
T 3pqa_A 364 LCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGL 442 (486)
T ss_dssp GGTCCCCSSEEEEEEECH-HHHHHHHTCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTCCCTTSCBCCSGGGEE
T ss_pred hhcccccccEEEEEEEcH-HHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCcCCCCCCCCCcCcCcC
Confidence 999999999999999999 9999999999999999999999999999999999999999997653 35899999999999
Q ss_pred CCcchHHHHHhhheeeEEEEec
Q 014515 396 GREKGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 396 g~~~g~~~l~~~~~~k~v~~~~ 417 (423)
|+++|.+|+++|++.|+|+++.
T Consensus 443 Gr~~g~~gl~~f~~~k~v~~~~ 464 (486)
T 3pqa_A 443 GREGVKYAMEEMSNIKTIIISK 464 (486)
T ss_dssp SCBSHHHHHHHTEEEEEEEEEC
T ss_pred CCCCcHHHHHHhhceEEEEEcC
Confidence 9999999999999999998875
No 27
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=5e-92 Score=720.77 Aligned_cols=415 Identities=27% Similarity=0.457 Sum_probs=390.6
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCC-CCCCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++.. |+..+++.+++++.+.+...+...+ ...+...+..++
T Consensus 83 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (521)
T 4e4g_A 83 TNPQRRARVFMKFVQLLNDNMNELAEMLSREHGKTIDDAKG-DIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQ 161 (521)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCHHHHHH-HHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEc
Confidence 57899999999999999999999999999999999999875 9999999999999877666554322 123456789999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++++++|+ .+.++.|+.||+
T Consensus 162 P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~-~~~~~~L~~~p~ 240 (521)
T 4e4g_A 162 PVGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGD-KGAVDAILTHPD 240 (521)
T ss_dssp ECCEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCC-HHHHHHHHTCTT
T ss_pred CCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCC-hHHHHHHHhCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999994 556799999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCc-cHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES-VYD 238 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~-~~~ 238 (423)
||.|+||||+.+|+.|++.+++ ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++ ++|
T Consensus 241 vd~I~FTGS~~vG~~i~~~aa~-~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d 319 (521)
T 4e4g_A 241 IAAVSFVGSTPIARYVYGTAAM-NGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETAN 319 (521)
T ss_dssp CCEEEEESCHHHHHHHHHHHHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHH
T ss_pred cCEEEEECCHHHHHHHHHHHhh-cCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHH
Confidence 9999999999999999999987 88999999999999999999999999999999999999999999999999999 999
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccc----CCCCceeecEEEecCCCc
Q 014515 239 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL----GAKGYYIKPTVFTGVKDD 314 (423)
Q Consensus 239 ~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~----~~~g~~~~Ptvl~~~~~~ 314 (423)
+|+++|+++++++++|+|.|+++++||+++..+++++.++|++++++|+++++||... +..|+|++|||+.+++++
T Consensus 320 ~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~ 399 (521)
T 4e4g_A 320 RLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPD 399 (521)
T ss_dssp HHHHHHHHHHHTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTT
T ss_pred HHHHHHHHHHHhccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCC
Confidence 9999999999999999999999999999999999999999999999999999999752 246899999999999999
Q ss_pred ccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC-CCCCCCCCCCCC
Q 014515 315 MLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQS 393 (423)
Q Consensus 315 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~S 393 (423)
|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||++... .+.+||||+|.|
T Consensus 400 ~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~k~S 479 (521)
T 4e4g_A 400 MDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIPVPLAYHSFGGWKSS 479 (521)
T ss_dssp SHHHHSCCCSSEEEECCBSSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSCCCCTTSCBCCEETT
T ss_pred CHhhcCcccCcEEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCcCCcccC
Confidence 9999999999999999999999999999999999999999999999999999999999999987544 477999999999
Q ss_pred CCC--CcchHHHHHhhheeeEEEEecC
Q 014515 394 GQG--REKGSYSLSNYLQVKAVVTALK 418 (423)
Q Consensus 394 G~g--~~~g~~~l~~~~~~k~v~~~~~ 418 (423)
|+| +++|.+|+++|++.|+|++++.
T Consensus 480 G~G~~~~~G~~gl~~ft~~K~v~~~~~ 506 (521)
T 4e4g_A 480 SFGDLNQHGTDSIKFWTRTKTITSRWP 506 (521)
T ss_dssp EESSCCBSHHHHHHHTEEEEEEEECCC
T ss_pred CCCCCccchHHHHHHhheEEEEEEecC
Confidence 999 7999999999999999998864
No 28
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=3.4e-92 Score=718.24 Aligned_cols=413 Identities=37% Similarity=0.603 Sum_probs=392.7
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCC-CCCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++.. |+..+++.+++++.+.++..++..+. ..+...+..++
T Consensus 67 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~ 145 (487)
T 2w8n_A 67 VSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHG-EILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQ 145 (487)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEe
Confidence 57899999999999999999999999999999999999875 99999999999999887766654332 23456789999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEe---CCchhHHHHhhc
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVS---GYGPTAGAALAS 156 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~---~~~~~~~~~l~~ 156 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++|+++ |++.+.++.|++
T Consensus 146 P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~ 225 (487)
T 2w8n_A 146 PIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICT 225 (487)
T ss_dssp ECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTT
T ss_pred cceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999 766778999999
Q ss_pred ccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCcc
Q 014515 157 HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 236 (423)
Q Consensus 157 ~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~ 236 (423)
||+||+|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++
T Consensus 226 ~~~v~~V~fTGS~~~g~~i~~~aa~-~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i 304 (487)
T 2w8n_A 226 DPLVSKISFTGSTTTGKILLHHAAN-SVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGI 304 (487)
T ss_dssp CTTEEEEEEEECHHHHHHHHHHHHT-TTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHH
T ss_pred CCCcCEEEEeCCHHHHHHHHHHHhc-cCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccH
Confidence 9999999999999999999999987 899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhh-cccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCc-eeecEEEecCCCc
Q 014515 237 YDQFVEKANALAMK-RVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY-YIKPTVFTGVKDD 314 (423)
Q Consensus 237 ~~~f~~~l~~~~~~-~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~-~~~Ptvl~~~~~~ 314 (423)
+|+|+++|++++++ +++|+|.++++++||+++..+++++.+++++++++|+++++||... ..|+ |++|||+.+++++
T Consensus 305 ~d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~-~~g~~~~~Ptvl~~v~~~ 383 (487)
T 2w8n_A 305 HDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-QLGKNFFEPTLLCNVTQD 383 (487)
T ss_dssp HHHHHHHHHHHHHHHCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBC-TTCTTCBCCEEEEEECGG
T ss_pred HHHHHHHHHHHHHhhcccCCcccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-CCCCceECCEEEecCCCc
Confidence 99999999999999 9999999999999999999999999999999999999999999764 3588 9999999999999
Q ss_pred ccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCC
Q 014515 315 MLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSG 394 (423)
Q Consensus 315 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG 394 (423)
|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++....+.+||||+|.||
T Consensus 384 ~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~~~SG 463 (487)
T 2w8n_A 384 MLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSG 463 (487)
T ss_dssp GGTTCTTCCSSEEEEEEESCHHHHHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCCCTTSCBCCSGGGE
T ss_pred chhhhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999987777889999999999
Q ss_pred CCCcchHHHHHhhheeeEEEEe
Q 014515 395 QGREKGSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 395 ~g~~~g~~~l~~~~~~k~v~~~ 416 (423)
+|+++|.+|+++|++.|+|+++
T Consensus 464 ~G~~~G~~~l~~f~~~k~v~~~ 485 (487)
T 2w8n_A 464 LGREGSKYGIDEYLELKYVCYG 485 (487)
T ss_dssp ESCBSTTTGGGGGEEEEEEEEC
T ss_pred cCCCchHHHHHHhcCccEEEEe
Confidence 9999999999999999999875
No 29
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=2.3e-91 Score=715.69 Aligned_cols=418 Identities=34% Similarity=0.552 Sum_probs=376.2
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCC--CCCCceeEee
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA--DGPYHVQTLH 78 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 78 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++.. |+..+++.+++++.+.++..+ ..+. ..+...++.+
T Consensus 69 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~ 146 (508)
T 3r64_A 69 TPAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKANL-EITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYR 146 (508)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCCHHHHHH-HHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEE
Confidence 57899999999999999999999999999999999999986 999999999999988766554 3332 2346788999
Q ss_pred ccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHH-HHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcc
Q 014515 79 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA-LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH 157 (423)
Q Consensus 79 ~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~-~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~ 157 (423)
+|+|||++|+|||||+...++++++||++||+||+|||+.+|.++ ..|.+++.++|+|+|++++++|++.+.++.|+.|
T Consensus 147 ~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~ 226 (508)
T 3r64_A 147 VAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTH 226 (508)
T ss_dssp EECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHC
T ss_pred ecceEEEEECCCcchHHHHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhC
Confidence 999999999999999999999999999999999999999999999 9999999999999999999999778899999999
Q ss_pred cCcceEeeecCchHHHHHHHHHhhC-CCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCcc
Q 014515 158 MEVDKLAFTGSTTTGKIVLQLAAKS-NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 236 (423)
Q Consensus 158 ~~v~~v~~tGs~~~~~~v~~~~a~~-~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~ 236 (423)
|+||.|+||||+.+|+.|++.+++. +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++
T Consensus 227 p~vd~I~fTGS~~~g~~i~~~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i 306 (508)
T 3r64_A 227 AVPKLISFTGSTPVGRRVGELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAV 306 (508)
T ss_dssp SSCSEEEEESCHHHHHHHHHHHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHH
T ss_pred CCccEEEEECCHHHHHHHHHHhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhH
Confidence 9999999999999999999988741 579999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCccc
Q 014515 237 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDML 316 (423)
Q Consensus 237 ~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~ 316 (423)
+|+|+++|+++++++++|+|.++++++||+++..+++++++++++++++|+++++||.. .|+|+.|||+.+++++|+
T Consensus 307 ~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl~~v~~~~~ 383 (508)
T 3r64_A 307 HDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI---EGRLVHPHVFSDVTSDME 383 (508)
T ss_dssp HHHHHHHHHHHHHTCCBSCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE---ETTEECCEEEEEECTTSG
T ss_pred HHHHHHHHHHHHHhccCCCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC---CCcEEecEEEecCCCCCh
Confidence 99999999999999999999999999999999999999999999999999999999975 689999999999999999
Q ss_pred ccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC-CCCCCCCCCCCCCC
Q 014515 317 IAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQ 395 (423)
Q Consensus 317 ~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG~ 395 (423)
+++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++.. .+.+||||+|.||+
T Consensus 384 i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~~~SG~ 463 (508)
T 3r64_A 384 IAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGL 463 (508)
T ss_dssp GGTSCCCSSEEEEEEESSHHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC-------------------
T ss_pred hhcccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCcCCcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999997654 68899999999999
Q ss_pred CCcchHHHHHhhheeeEEEEec-----CCCCCC
Q 014515 396 GREKGSYSLSNYLQVKAVVTAL-----KNPAWL 423 (423)
Q Consensus 396 g~~~g~~~l~~~~~~k~v~~~~-----~~~~~~ 423 (423)
|+++|.+|+++||+.|+|+++. +++.||
T Consensus 464 Gr~~G~~~l~~ft~~k~v~~~~~~~~~~~~~~~ 496 (508)
T 3r64_A 464 GRFNGDWAIEEFTTDRWIGIKRSAENLYFQSHH 496 (508)
T ss_dssp -CCCHHHHHHHTEEEEEEEEECCSTTCCCC---
T ss_pred CcCccHHHHHHhhceEEEEEecccchhcchhhc
Confidence 9999999999999999999885 357776
No 30
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=1.1e-91 Score=716.32 Aligned_cols=414 Identities=31% Similarity=0.490 Sum_probs=391.0
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCC---CC--CCcee
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA---DG--PYHVQ 75 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~---~~--~~~~~ 75 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++. .|+..+++.+++++.++++..++..+. .. +...+
T Consensus 74 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~ 152 (501)
T 1uxt_A 74 MPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGL 152 (501)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEE
Confidence 5789999999999999999999999999999999999988 599999999999999887776554332 22 33678
Q ss_pred EeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhh
Q 014515 76 TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 155 (423)
Q Consensus 76 ~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~ 155 (423)
..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++++++|++ +.++.|+
T Consensus 153 ~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~ 231 (501)
T 1uxt_A 153 VRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIV 231 (501)
T ss_dssp EEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHH
T ss_pred EEEeeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCc-HHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999976 8899999
Q ss_pred cccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCc
Q 014515 156 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 235 (423)
Q Consensus 156 ~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~ 235 (423)
.||++|+|+||||+.+|+.|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++
T Consensus 232 ~~~~vd~I~FTGS~~~G~~i~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~ 308 (501)
T 1uxt_A 232 ADDRVAAVSFTGSTEVGERVVKVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERP 308 (501)
T ss_dssp TCTTCCEEEEESCHHHHHHHHHHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHH
T ss_pred hCCCcCEEEEeCcHHHHHHHHHhcC---CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccc
Confidence 9999999999999999999999876 7999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCC-ceeecEEEecCC--
Q 014515 236 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG-YYIKPTVFTGVK-- 312 (423)
Q Consensus 236 ~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g-~~~~Ptvl~~~~-- 312 (423)
++|+|+++|+++++++++|+|.|+++++||+++..+++++++++++++++|+++++||.. .| +|++|||+.+++
T Consensus 309 i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~---~g~~~~~Ptvl~~v~~~ 385 (501)
T 1uxt_A 309 VYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR---LGPTYVQPTFVEAPADR 385 (501)
T ss_dssp HHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB---CSSSCBCCEEEECCHHH
T ss_pred hHHHHHHHHHHHHHhccCCCccccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCCceECCEEEeCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999975 57 999999999999
Q ss_pred -CcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCc-CCCCCCCCCCCC
Q 014515 313 -DDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCF-DVFDAAIPFGGY 390 (423)
Q Consensus 313 -~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~-~~~~~~~pfgG~ 390 (423)
++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++ +...+.+||||+
T Consensus 386 ~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~PfGG~ 465 (501)
T 1uxt_A 386 VKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGR 465 (501)
T ss_dssp HTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCE
T ss_pred CCcCHHHhCcccCceEEEEeeCCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCCCCCCCCCCCCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999997 566788999999
Q ss_pred CCCCCCCcchHHHHHhhheeeEEEEecC-CCCC
Q 014515 391 KQSGQGREKGSYSLSNYLQVKAVVTALK-NPAW 422 (423)
Q Consensus 391 ~~SG~g~~~g~~~l~~~~~~k~v~~~~~-~~~~ 422 (423)
|+||+|+++|.+|+++|++.|+|++++. +.+|
T Consensus 466 k~SG~G~~~G~~~l~~f~~~k~v~~~~~~~~~~ 498 (501)
T 1uxt_A 466 KKSGVFREGIGYAVEAVTAYKTIVFNYKGKGVW 498 (501)
T ss_dssp ETTEESCBSTTTTHHHHEEEEEEEEECTTSSSS
T ss_pred CCCCCCccChHHHHHHhCceeEEEEecCCCccc
Confidence 9999999999999999999999988763 3444
No 31
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=1.6e-90 Score=710.64 Aligned_cols=413 Identities=33% Similarity=0.541 Sum_probs=387.5
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCC--CCCCCceeEee
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP--ADGPYHVQTLH 78 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 78 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++. .|+..+++.+++++.++++..+...+ ...+...+..+
T Consensus 93 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (516)
T 1uzb_A 93 WPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFY 171 (516)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEE
Confidence 5789999999999999999999999999999999999987 49999999999999988777665422 22245678899
Q ss_pred ccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhccc
Q 014515 79 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHM 158 (423)
Q Consensus 79 ~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~ 158 (423)
+|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|.+++.++|+|+|++++++|.+.+.++.|+.||
T Consensus 172 ~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~ 251 (516)
T 1uzb_A 172 VPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHP 251 (516)
T ss_dssp EECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCT
T ss_pred eccceEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999997788999999999
Q ss_pred CcceEeeecCchHHHHHHHHHhh-----CCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEe
Q 014515 159 EVDKLAFTGSTTTGKIVLQLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVH 233 (423)
Q Consensus 159 ~v~~v~~tGs~~~~~~v~~~~a~-----~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~ 233 (423)
+||+|+||||+.+|+.|++.++. .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||
T Consensus 252 ~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~ 331 (516)
T 1uzb_A 252 RIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILT 331 (516)
T ss_dssp TCCEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEE
T ss_pred CcCEEEecCCHHHHHHHHHHhhhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEc
Confidence 99999999999999999998871 2789999999999999999999999999999999999999999999999999
Q ss_pred CccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCC
Q 014515 234 ESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKD 313 (423)
Q Consensus 234 ~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~ 313 (423)
++++|+|+++|+++++++++|+| ++++++||+++..+++++.+++++++++| ++++||...+..|+|++|||+.++++
T Consensus 332 ~~i~d~f~~~l~~~~~~~~~G~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v~~ 409 (516)
T 1uzb_A 332 QGAYEPVLERVLKRAERLSVGPA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPP 409 (516)
T ss_dssp HHHHHHHHHHHHHHHTTCCBSCG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCSSSSCCBCCEEEESCCT
T ss_pred hHHHHHHHHHHHHHHHhccCCCC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCCCCCcEECCEEEECCCC
Confidence 99999999999999999999999 99999999999999999999999999998 89999976334689999999999999
Q ss_pred cccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCCCCCC
Q 014515 314 DMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYK 391 (423)
Q Consensus 314 ~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~~ 391 (423)
+|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||+... ..+.+||||+|
T Consensus 410 ~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k 489 (516)
T 1uzb_A 410 KARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFK 489 (516)
T ss_dssp TSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSG
T ss_pred CCHhhhccccCceEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcC
Confidence 9999999999999999999999999999999999999999999999999999999999999998643 35789999999
Q ss_pred CCCCCC-cchHHHHHhhheeeEEEEe
Q 014515 392 QSGQGR-EKGSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 392 ~SG~g~-~~g~~~l~~~~~~k~v~~~ 416 (423)
.||+|+ ++|.+++++|++.|+|+++
T Consensus 490 ~SG~G~~~~g~~~l~~f~~~k~v~~~ 515 (516)
T 1uzb_A 490 LSGTNAKTGALDYLRLFLEMKAVAER 515 (516)
T ss_dssp GGBSCCCBTSHHHHHTTEEEEEEEEE
T ss_pred cCCCCCccchHHHHHHcCCeeEEEec
Confidence 999994 7899999999999999875
No 32
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=1e-90 Score=709.48 Aligned_cols=414 Identities=28% Similarity=0.486 Sum_probs=387.3
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCC-CCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++. .|+..+++.+++++.+.++..+...+.. .+...+..++
T Consensus 78 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~ 156 (500)
T 2j6l_A 78 IPAPKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGV-GEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWN 156 (500)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEe
Confidence 5789999999999999999999999999999999999985 5999999999999988776655443322 2344578899
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHH----cCCCCCcEEEEeCCchhHHHHhh
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHE----AGLPPGVLNIVSGYGPTAGAALA 155 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~----ag~P~g~v~~v~~~~~~~~~~l~ 155 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.+ +|+|+|++++++| +.+.++.|+
T Consensus 157 P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g-~~~~g~~L~ 235 (500)
T 2j6l_A 157 PVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMA 235 (500)
T ss_dssp ECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECC-SHHHHHHHH
T ss_pred cccEEEEECCCcchhhHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeC-CHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998888664 6999999999999 788899999
Q ss_pred cccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCc
Q 014515 156 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 235 (423)
Q Consensus 156 ~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~ 235 (423)
.||++|+|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++
T Consensus 236 ~~~~vd~I~FTGS~~~g~~i~~~aa~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~ 314 (500)
T 2j6l_A 236 KDERVNLLSFTGSTQVGKQVGLMVQE-RFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHES 314 (500)
T ss_dssp HCTTCSEEEEESCHHHHHHHHHHHHH-TTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETT
T ss_pred cCCCcCEEEEECCHHHHHHHHHHhcc-CCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHH
Confidence 99999999999999999999999987 78999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCcc
Q 014515 236 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDM 315 (423)
Q Consensus 236 ~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~ 315 (423)
++|+|+++|+++++++++|+|.|+++++||+++..+++++++++++++++|+++++||...+..|+|++|||+.+++++|
T Consensus 315 i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~ 394 (500)
T 2j6l_A 315 IHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDA 394 (500)
T ss_dssp THHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTC
T ss_pred HHHHHHHHHHHHhhhcccCCcccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999998644568999999999999999
Q ss_pred cccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHH--HhcceeEEEEcCcCC-CCCCCCCCCCCC
Q 014515 316 LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLM--RALRVGSVWINCFDV-FDAAIPFGGYKQ 392 (423)
Q Consensus 316 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~--~~l~~g~v~iN~~~~-~~~~~pfgG~~~ 392 (423)
++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++ .++++|+|+||+... ..+.+||||+|.
T Consensus 395 ~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~~~~~~PfGG~k~ 474 (500)
T 2j6l_A 395 SIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKH 474 (500)
T ss_dssp HHHHSCCSSSEEEEEEECCHHHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTCCCTTSEECCSGG
T ss_pred hhhcCcccCceEEEEeeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCccCCCCCCcCCcCC
Confidence 99999999999999999999999999999999999999999999999999 779999999998654 346899999999
Q ss_pred CCCCCcchHHHHHhhheeeEEEEec
Q 014515 393 SGQGREKGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 393 SG~g~~~g~~~l~~~~~~k~v~~~~ 417 (423)
||+|+++|.+|+++|++.|+|++++
T Consensus 475 SG~G~~~g~~~~~~f~~~k~v~~~~ 499 (500)
T 2j6l_A 475 TGGGRESGSDAWKQYMRRSTCTINY 499 (500)
T ss_dssp GCSCCEESTTGGGGGEEEEEEEEEC
T ss_pred CCCCCcchHHHHHHhhceEEEEEeC
Confidence 9999999999999999999998763
No 33
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=5.2e-91 Score=708.47 Aligned_cols=409 Identities=33% Similarity=0.509 Sum_probs=386.5
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCC-CC----Cce-
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GP----YHV- 74 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~----~~~- 74 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++.. |+..+++.+++++.+.++..+...+.. .+ ...
T Consensus 59 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (475)
T 1euh_A 59 LSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVS-EVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIA 137 (475)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceee
Confidence 57899999999999999999999999999999999999864 999999999999988876554432211 23 355
Q ss_pred eEeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHh
Q 014515 75 QTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAAL 154 (423)
Q Consensus 75 ~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l 154 (423)
+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++++++|++.+.++.|
T Consensus 138 ~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L 217 (475)
T 1euh_A 138 VVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYI 217 (475)
T ss_dssp EEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHH
T ss_pred EEEEeccceEEEECCCCchHHHHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999777789999
Q ss_pred hcccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeC
Q 014515 155 ASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHE 234 (423)
Q Consensus 155 ~~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~ 234 (423)
+.||++|.|+||||+.+|+.|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+
T Consensus 218 ~~~~~v~~V~fTGS~~~g~~i~~~aa---~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~ 294 (475)
T 1euh_A 218 VEHQAVNFINFTGSTGIGERIGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVME 294 (475)
T ss_dssp HHCTTCCEEEEESCHHHHHHHHHHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEH
T ss_pred HhCCCcCEEEEECchHHHHHHHHhcC---CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEeh
Confidence 99999999999999999999999876 799999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCc
Q 014515 235 SVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDD 314 (423)
Q Consensus 235 ~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~ 314 (423)
+++|+|+++|+++++++++|+|.| ++++||+++..+++++.+++++++++|+++++||.. .|+|++|||+.+++++
T Consensus 295 ~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~---~g~~~~Ptvl~~v~~~ 370 (475)
T 1euh_A 295 SVADELVEKIREKVLALTIGNPED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTD 370 (475)
T ss_dssp HHHHHHHHHHHHHHHTSCBSCGGG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTT
T ss_pred hHHHHHHHHHHHHHHhccCCCccc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCceeCCEEEeCCCCc
Confidence 999999999999999999999999 999999999999999999999999999999999975 5899999999999999
Q ss_pred ccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcC-cCCCCCCCCCCCCCCC
Q 014515 315 MLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINC-FDVFDAAIPFGGYKQS 393 (423)
Q Consensus 315 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~-~~~~~~~~pfgG~~~S 393 (423)
|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||+ +....+.+||||+|.|
T Consensus 371 ~~~~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~k~S 450 (475)
T 1euh_A 371 MRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKS 450 (475)
T ss_dssp SGGGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETT
T ss_pred CHHHcCccccceEEEEecCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCCcCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999998 6556788999999999
Q ss_pred CCCCcchHHHHHhhheeeEEEEec
Q 014515 394 GQGREKGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 394 G~g~~~g~~~l~~~~~~k~v~~~~ 417 (423)
|+|+++|.+|+++|++.|+|++++
T Consensus 451 G~G~~~g~~~~~~~~~~k~v~~~~ 474 (475)
T 1euh_A 451 GAGIQGVKYSIEAMTTVKSVVFDI 474 (475)
T ss_dssp EESCBSHHHHHHHTEEEEEEEEEC
T ss_pred CcCCCccHHHHHHhCCeeEEEEec
Confidence 999999999999999999998764
No 34
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=1e-90 Score=708.57 Aligned_cols=413 Identities=31% Similarity=0.496 Sum_probs=371.1
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCC--CCCCceeEee
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA--DGPYHVQTLH 78 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 78 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||+.++.. |+..+++.+++++.+.+...+...+. ..+...+.++
T Consensus 63 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (485)
T 4dng_A 63 STTEDRKAVLQKARGYLHENRDDIIMMIARETGGTIIKSTI-ELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYR 141 (485)
T ss_dssp CCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEE
Confidence 57899999999999999999999999999999999999986 99999999999999887766654442 2346788999
Q ss_pred ccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHH-HHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcc
Q 014515 79 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA-LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH 157 (423)
Q Consensus 79 ~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~-~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~ 157 (423)
+|+|||++|+|||||+...++++++||++||+||+|||+.+|.++ ..|.+++.++|+|+|+++++++++.+.++.|+.|
T Consensus 142 ~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~ 221 (485)
T 4dng_A 142 LPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTN 221 (485)
T ss_dssp EECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHC
T ss_pred ecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhC
Confidence 999999999999999999999999999999999999999999999 9999999999999999999999877899999999
Q ss_pred cCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccH
Q 014515 158 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 237 (423)
Q Consensus 158 ~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~ 237 (423)
|++|.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++
T Consensus 222 p~v~~v~fTGS~~~g~~i~~~aa~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~ 300 (485)
T 4dng_A 222 PIPRLISFTGSTAVGRHIGEIAGR-AFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVY 300 (485)
T ss_dssp SSCSEEEEEECHHHHHHHHHHHHH-HTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHH
T ss_pred CCCCEEEEECCcHHHHHHHHHHhh-hccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHH
Confidence 999999999999999999999887 7899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCcccc
Q 014515 238 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLI 317 (423)
Q Consensus 238 ~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~ 317 (423)
|+|+++|+++++++++|+|.|+++++||+++..+++++.+++++++++|+++++||.. .|+|++|||+.+++++|++
T Consensus 301 d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~v~~~~~i 377 (485)
T 4dng_A 301 DEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR---VGNVLTPYVFVGADNNSKI 377 (485)
T ss_dssp HHHHHHHHHHHHHCCBSCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSHH
T ss_pred HHHHHHHHHHHHhccCCCCCcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCcEECCEEEecCCCCChh
Confidence 9999999999999999999999999999999999999999999999999999999975 6899999999999999999
Q ss_pred cccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC-CCCCCCCCCCCCCCC
Q 014515 318 AKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQG 396 (423)
Q Consensus 318 ~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG~g 396 (423)
++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++.. .+.+||||+|.||+|
T Consensus 378 ~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~~~SG~G 457 (485)
T 4dng_A 378 AQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVG 457 (485)
T ss_dssp HHCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC-------------------
T ss_pred hcCccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999997654 688999999999999
Q ss_pred CcchHHHHHhhheeeEEEEecC
Q 014515 397 REKGSYSLSNYLQVKAVVTALK 418 (423)
Q Consensus 397 ~~~g~~~l~~~~~~k~v~~~~~ 418 (423)
+++|.+++++||+.|+|+++..
T Consensus 458 ~~~g~~~l~~~t~~k~v~~~~~ 479 (485)
T 4dng_A 458 RFGNPWVVEEFTVTKWISIQKQ 479 (485)
T ss_dssp ---CHHHHHHHEEEEEEEEEC-
T ss_pred ccchHHHHHHhhceEEEEEecC
Confidence 9999999999999999988764
No 35
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=1.1e-90 Score=707.12 Aligned_cols=409 Identities=37% Similarity=0.634 Sum_probs=365.8
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++...|+..+++.+++++.++++..+... +...+..++|
T Consensus 64 ~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~~P 139 (478)
T 3ty7_A 64 TSVKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEER----RGDDLVVKEA 139 (478)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEE----ETTEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccC----CccceEEecC
Confidence 578999999999999999999999999999999999998556999999999999988877655331 2357889999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.++.|+.||++
T Consensus 140 ~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v 219 (478)
T 3ty7_A 140 IGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKV 219 (478)
T ss_dssp CCCEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTC
T ss_pred ceEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999888899999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~f 240 (423)
|.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|
T Consensus 220 ~~v~fTGS~~~G~~i~~~aa~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f 298 (478)
T 3ty7_A 220 RMMSFTGSGPTGSKIMEKAAK-DFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAF 298 (478)
T ss_dssp CEEEECSCHHHHCC--CSTTT-TTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHH
T ss_pred CEEEEECcHHHHHHHHHHHHh-cCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHH
Confidence 999999999999999998887 7899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcc-cC--CCCceeecEEEecCCCcccc
Q 014515 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER-LG--AKGYYIKPTVFTGVKDDMLI 317 (423)
Q Consensus 241 ~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~-~~--~~g~~~~Ptvl~~~~~~~~~ 317 (423)
+++|+++++++++|+|.|+++++||+++.++++++++++++++++|+++++||.. .+ ..|+|++|||+.++++++++
T Consensus 299 ~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~ 378 (478)
T 3ty7_A 299 LAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTI 378 (478)
T ss_dssp HHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHH
T ss_pred HHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcc
Confidence 9999999999999999999999999999999999999999999999999999943 22 36899999999999999999
Q ss_pred cccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCC
Q 014515 318 AKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGR 397 (423)
Q Consensus 318 ~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~ 397 (423)
++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+ +...+.+||||+|.||+|+
T Consensus 379 ~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~-~~~~~~~PfGG~k~SG~G~ 457 (478)
T 3ty7_A 379 AQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINE-AGRKPDLPFGGYKQSGLGR 457 (478)
T ss_dssp HHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETT-CC-----------------
T ss_pred cCceeECceeEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCc
Confidence 999999999999999999999999999999999999999999999999999999999999 6667889999999999999
Q ss_pred cchHHHHHhhheeeEEEE
Q 014515 398 EKGSYSLSNYLQVKAVVT 415 (423)
Q Consensus 398 ~~g~~~l~~~~~~k~v~~ 415 (423)
++|.+|+++||+.|+|+.
T Consensus 458 ~~G~~~l~~~t~~k~v~~ 475 (478)
T 3ty7_A 458 EWGDYGIEEFLEVKSIAG 475 (478)
T ss_dssp -----CCGGGEEEEEEET
T ss_pred cchHHHHHHhcCeEEEEE
Confidence 999999999999999874
No 36
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=3.5e-90 Score=703.78 Aligned_cols=417 Identities=31% Similarity=0.492 Sum_probs=389.6
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCC-CCCCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..++. .|+..+++.+++++.+.+...++..+ ...+...+.+++
T Consensus 62 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~ 140 (486)
T 1t90_A 62 VAVPRRARILFNFQQLLSQHKEELAHLITIENGKNTKEAL-GEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRY 140 (486)
T ss_dssp SCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEec
Confidence 5789999999999999999999999999999999999887 49999999999998766665554322 122446688999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++++++| +.+.+..|++||+
T Consensus 141 P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~ 219 (486)
T 1t90_A 141 PIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPE 219 (486)
T ss_dssp ECSEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTT
T ss_pred ccCEEEEECCCchhHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEEC-CHHHHHHHHhCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999998 5678999999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCe-EEEeCccHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR-TFVHESVYD 238 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~-v~V~~~~~~ 238 (423)
||+|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++ +|||++ +|
T Consensus 220 v~~I~fTGS~~~g~~i~~~aa~-~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d 297 (486)
T 1t90_A 220 IKAISFVGSKPVGEYVYKKGSE-NLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-AD 297 (486)
T ss_dssp EEEEEEESCHHHHHHHHHHHHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HH
T ss_pred CCEEEEeCCHHHHHHHHHHHhc-cCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HH
Confidence 9999999999999999999887 78999999999999999999999999999999999999999999999 999999 99
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC-CCCceeecEEEecCCCcccc
Q 014515 239 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLI 317 (423)
Q Consensus 239 ~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~ 317 (423)
+|+++|+++++++++|+|.++++++||+++..+++++.+++++++++|+++++||...+ ..|+|++|||+.+++++|++
T Consensus 298 ~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~ 377 (486)
T 1t90_A 298 EFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTI 377 (486)
T ss_dssp HHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHH
T ss_pred HHHHHHHHHHHhcccCCCCccCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHh
Confidence 99999999999999999999999999999999999999999999999999999997432 36899999999999999999
Q ss_pred cccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC-CCCCCCCCCCCCCCC
Q 014515 318 AKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQG 396 (423)
Q Consensus 318 ~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG~g 396 (423)
++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.... .+.+||||+|.||+|
T Consensus 378 ~~eEiFGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G 457 (486)
T 1t90_A 378 WKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFG 457 (486)
T ss_dssp HHSCCCSSEEEEEEESSHHHHHHHHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCCTTSCCCCEETTEES
T ss_pred hcCcccCceEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCcCCCCcCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999985433 467999999999999
Q ss_pred --CcchHHHHHhhheeeEEEEecCCCC
Q 014515 397 --REKGSYSLSNYLQVKAVVTALKNPA 421 (423)
Q Consensus 397 --~~~g~~~l~~~~~~k~v~~~~~~~~ 421 (423)
+++|.+|+++|++.|+|+.++.++.
T Consensus 458 ~~~~~g~~g~~~~~~~k~v~~~~~~~~ 484 (486)
T 1t90_A 458 TLHANGKDSVDFYTRKKVVTARYPAPD 484 (486)
T ss_dssp SSCSSHHHHHHHTEEEEEEEEECCCCC
T ss_pred CCccchHHHHHHhhceEEEEEecCCCC
Confidence 8999999999999999998875543
No 37
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=4.1e-89 Score=691.99 Aligned_cols=406 Identities=28% Similarity=0.387 Sum_probs=375.4
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCcc----CCCCCCCceeE
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT----APADGPYHVQT 76 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~ 76 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++...|+..++..+++++.......... .....+...++
T Consensus 37 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (469)
T 3sza_A 37 RPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDELYI 116 (469)
T ss_dssp CSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHHHHHHHHSCEECCCCGGGTTSEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCccccCCCcccee
Confidence 57899999999999999999999999999999999999876799999998888876554432211 11122456789
Q ss_pred eeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhc
Q 014515 77 LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS 156 (423)
Q Consensus 77 ~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~ 156 (423)
.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..|.+++.++ +|+|++++++|. .+....|+.
T Consensus 117 ~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g~-~~~~~~ll~ 194 (469)
T 3sza_A 117 HSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQY-LDKDLYPVINGG-VPETTELLK 194 (469)
T ss_dssp EEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHH-SCTTTSCBCCCS-HHHHHHHTT
T ss_pred eccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh-CCcceEEEEECC-HHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999998 999999999984 445566777
Q ss_pred ccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCcc
Q 014515 157 HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 236 (423)
Q Consensus 157 ~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~ 236 (423)
| ++|.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++
T Consensus 195 ~-~vd~I~FTGS~~vG~~i~~~aa~-~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i 272 (469)
T 3sza_A 195 E-RFDHILYTGSTGVGKIIMTAAAK-HLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSI 272 (469)
T ss_dssp S-CCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSCCEEEECGGG
T ss_pred c-CCCEEEEECCHHHHHHHHHHHhh-ccCceEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEehhH
Confidence 7 89999999999999999999987 899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCccc
Q 014515 237 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDML 316 (423)
Q Consensus 237 ~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~ 316 (423)
+|+|+++|+++++++ +|+|.++++++||+++..+++++.+++ +|+++++||... ..|+|++|||+.+++++|+
T Consensus 273 ~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~GG~~~-~~g~~~~PTvl~~v~~~~~ 345 (469)
T 3sza_A 273 QNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYGGTGD-AATRYIAPTILTDVDPQSP 345 (469)
T ss_dssp HHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEECCCEE-TTTTEECCEEEESCCTTSG
T ss_pred HHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeCCccC-CCCceeCCeeecCCCCcch
Confidence 999999999999988 699999999999999999999999999 589999999864 4689999999999999999
Q ss_pred ccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcC--CCCCCCCCCCCCCCC
Q 014515 317 IAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFD--VFDAAIPFGGYKQSG 394 (423)
Q Consensus 317 ~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~--~~~~~~pfgG~~~SG 394 (423)
+++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||+.. ...+.+||||+|+||
T Consensus 346 i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V~vN~~~~~~~~~~~PfGG~k~SG 425 (469)
T 3sza_A 346 VMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSG 425 (469)
T ss_dssp GGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEEEESCSSGGGSCTTSCBCCCGGGE
T ss_pred hhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceEEEeCCCCCCCCCCCCcCCccccc
Confidence 999999999999999999999999999999999999999999999999999999999999975 346889999999999
Q ss_pred CCCcchHHHHHhhheeeEEEEec
Q 014515 395 QGREKGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 395 ~g~~~g~~~l~~~~~~k~v~~~~ 417 (423)
+|+++|.+|+++||+.|+|+++.
T Consensus 426 ~Gr~~G~~g~~~ft~~K~v~~~~ 448 (469)
T 3sza_A 426 MGSYHGKKSFETFSHRRSCLVRP 448 (469)
T ss_dssp ECCBSTHHHHHHTEEEEEEEECC
T ss_pred cCccchHHHHHHhhCeeEEEECC
Confidence 99999999999999999998874
No 38
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=4.2e-89 Score=694.34 Aligned_cols=417 Identities=28% Similarity=0.421 Sum_probs=386.5
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccC-C-CCCCCceeEee
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA-P-ADGPYHVQTLH 78 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~-~-~~~~~~~~~~~ 78 (423)
+|.++|.++|+++++.|++|+++|++++++|+||+..+ . .|+...+..+++++....+...... . ...+...+..+
T Consensus 47 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~-~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (474)
T 4h7n_A 47 LGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLSIT-V-LEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSL 124 (474)
T ss_dssp THHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSHHH-H-HHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHH-H-HHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEE
Confidence 57899999999999999999999999999999998644 3 4999999999999887766544322 1 12344567788
Q ss_pred ccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhccc
Q 014515 79 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHM 158 (423)
Q Consensus 79 ~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~ 158 (423)
+|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++ +.+.+..|..|
T Consensus 125 ~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~ag~p~gv~~~v~g-~~~~~~~l~~~- 202 (474)
T 4h7n_A 125 VPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKPSEIAPRFVAPLLMALNTVPELRDVLIFVEG-GGETGANLINY- 202 (474)
T ss_dssp EECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEECTTSCTTHHHHHHHHTTCTTTTTTEEECCC-CHHHHHHHHTT-
T ss_pred EeccEEEEECCCCcHHHHHhcccCcchhcCCceeecccccCchHHHHHHhhhhhhcccccceeeccc-cchhhhhhhhc-
Confidence 9999999999999999999999999999999999999999999999999999999999999999998 66778888865
Q ss_pred CcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHH
Q 014515 159 EVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 238 (423)
Q Consensus 159 ~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~ 238 (423)
+|.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++|
T Consensus 203 -v~~v~FTGS~~~G~~i~~~aa~-~~~~v~lElGGk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d 280 (474)
T 4h7n_A 203 -VDFVCFTGSVATGREVAETAAR-RFIPAYLELGGKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFE 280 (474)
T ss_dssp -CSEEEEESCHHHHHHHHHHHHH-HTCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHH
T ss_pred -cceEEeccccchhhhhhhhhhc-ccccccccCCCcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHH
Confidence 9999999999999999999988 78999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC-CCCceeecEEEecCCCcccc
Q 014515 239 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLI 317 (423)
Q Consensus 239 ~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~ 317 (423)
+|+++|++++.++++|+|.++++++||+++..+++++.+++++++++|+++++||...+ ..|+|++|||+.+++++|++
T Consensus 281 ~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i 360 (474)
T 4h7n_A 281 EFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKV 360 (474)
T ss_dssp HHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGG
T ss_pred HHHHHHHHHhhccccCCCcccccccCccccHHHHHHHHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeecccccc
Confidence 99999999999999999999999999999999999999999999999999999997643 46899999999999999999
Q ss_pred cccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCCCCCCCCCC
Q 014515 318 AKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQ 395 (423)
Q Consensus 318 ~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~~~SG~ 395 (423)
++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.+. ..+.+||||+|.||+
T Consensus 361 ~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~ 440 (474)
T 4h7n_A 361 MTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALKVARQLNAGAISINDAALTAMMHEGEKNAFNFSGL 440 (474)
T ss_dssp GTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSSHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEE
T ss_pred ccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999998653 457899999999999
Q ss_pred C-CcchHHHHHhhheeeEEEEec---CCCCCC
Q 014515 396 G-REKGSYSLSNYLQVKAVVTAL---KNPAWL 423 (423)
Q Consensus 396 g-~~~g~~~l~~~~~~k~v~~~~---~~~~~~ 423 (423)
| +++|.+|+++|++.|+|+++. ..||||
T Consensus 441 G~~~~G~~g~~~f~~~k~v~~~~~~~~~p~w~ 472 (474)
T 4h7n_A 441 GGSRVGAAGLKRFLRKQAFLIKTNSTSDPWWF 472 (474)
T ss_dssp SCCSSTTHHHHTTEEEEEEEEECSSSCCTTSC
T ss_pred CCCcchHHHHHHhCeEEEEEECCCCCCCCCCc
Confidence 8 789999999999999999985 358887
No 39
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=2.2e-88 Score=697.79 Aligned_cols=421 Identities=27% Similarity=0.412 Sum_probs=390.5
Q ss_pred CCHHHHHHHHHHHHHHHHHc-HHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCC-CCCCCceeEee
Q 014515 1 MTAYERSKIILRFADLLERH-NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLH 78 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~-~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 78 (423)
+|.++|+++|+++++.|+++ +++|++++++|+|||+.++...++..+++.+++++.++++..+.... ...+...+.++
T Consensus 119 ~~~~~R~~iL~~~a~~l~~~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r 198 (563)
T 4e3x_A 119 KPMADRAQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYR 198 (563)
T ss_dssp SCHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECC
T ss_pred CCHHHHHHHHHHHHHHHHhccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEe
Confidence 57899999999999999998 99999999999999999987645999999999999998887664322 22234456777
Q ss_pred ccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhccc
Q 014515 79 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHM 158 (423)
Q Consensus 79 ~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~ 158 (423)
.|+|||++|+|||||+....+++++|| +||+||+|||+.+|+++..|++++.++|+|+|+||+++|++.+.++.|+.||
T Consensus 199 ~p~GVV~~I~PwNfP~~~~~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp 277 (563)
T 4e3x_A 199 GLEGFVAAISPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSE 277 (563)
T ss_dssp BCSSEEEEECCSSCHHHHHHHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCT
T ss_pred cCceEEEEECCchHHHHHHHHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCC
Confidence 888999999999999999999999999 6999999999999999999999999999999999999998888999999999
Q ss_pred CcceEeeecCchHHHHHHHHHhhCCCC------ceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEE
Q 014515 159 EVDKLAFTGSTTTGKIVLQLAAKSNLK------PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFV 232 (423)
Q Consensus 159 ~v~~v~~tGs~~~~~~v~~~~a~~~~~------~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V 232 (423)
+|++|+||||+.+|+.|++.++. +++ |+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+||
T Consensus 278 ~v~~I~FTGSt~vG~~i~~~aa~-~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V 356 (563)
T 4e3x_A 278 HLCGINFTGSVPTFKHLWRQVAQ-NLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYV 356 (563)
T ss_dssp TEEEEEEESCHHHHHHHHHHHHH-TTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEE
T ss_pred CcCEEEEECCHHHHHHHHHHHHh-hCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEE
Confidence 99999999999999999999987 666 49999999999999999999999999999999999999999999999
Q ss_pred eCccHHHHHHHHHHHHhhcccCCC-CCCCCcccCCCCHHHHHHHHHHHHHHHh-CCCEEEeCCcccCCCCceeecEEEec
Q 014515 233 HESVYDQFVEKANALAMKRVVGDP-FKGGIQQGPQIDSEQFEKILKYIRSGVD-GGAKLETGGERLGAKGYYIKPTVFTG 310 (423)
Q Consensus 233 ~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~~gp~~~~~~~~~~~~~i~~a~~-~ga~~~~gg~~~~~~g~~~~Ptvl~~ 310 (423)
|++++|+|+++|+++++++++|+| .|+++++||+++..+++++.++|+++++ +|+++++||...+..|+|++|||+.+
T Consensus 357 ~~si~d~f~~~l~~~~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~ 436 (563)
T 4e3x_A 357 PKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIES 436 (563)
T ss_dssp EGGGHHHHHHHHHHHHHTCCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEE
T ss_pred ecchHHHHHHHHHHHHHhccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEec
Confidence 999999999999999999999999 9999999999999999999999999996 79999999987666799999999999
Q ss_pred CCCcccccccccccCeeEEEecCC--HHHHHHHH-hcCCCCceEEEecCCHHHHHHHHHhcc--eeEEEEcCcCC--CCC
Q 014515 311 VKDDMLIAKDEIFGPVQSILKYKD--LDEVIQRS-NASQYGLAAGVFTHNLDTANTLMRALR--VGSVWINCFDV--FDA 383 (423)
Q Consensus 311 ~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~~~v~s~d~~~~~~~~~~l~--~g~v~iN~~~~--~~~ 383 (423)
+++++++++||+||||++|++|+| +||||+++ |+++|||+++|||+|.+++++++++++ +|+|+||+.++ ..+
T Consensus 437 v~~~~~i~~eEiFGPVl~V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~ 516 (563)
T 4e3x_A 437 KDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVG 516 (563)
T ss_dssp SCTTCGGGTSCCCSSEEEEEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTT
T ss_pred CCCCChhhcCCCcCeEEEEEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcC
Confidence 999999999999999999999996 79999999 799999999999999999999999976 99999998764 347
Q ss_pred CCCCCCCCCCCCC-CcchHHHHHhhheeeEEEEecC--CCCCC
Q 014515 384 AIPFGGYKQSGQG-REKGSYSLSNYLQVKAVVTALK--NPAWL 423 (423)
Q Consensus 384 ~~pfgG~~~SG~g-~~~g~~~l~~~~~~k~v~~~~~--~~~~~ 423 (423)
.+||||+|.||+| +++|.+++++|++.|+|...+. .++||
T Consensus 517 ~~PFGG~k~SG~g~~~~G~~~l~~~~~~k~v~~~~~~~~~~~y 559 (563)
T 4e3x_A 517 QQPFGGARASGTNDKPGGPHYILRWTSPQVIKETHKPLGDWRY 559 (563)
T ss_dssp TSCCCCEETTBCCCCTTSTTGGGGGBCCEEEEEECSCCCCSSC
T ss_pred CCCCCCccccCCCCccCCHHHHHHhCceEEEEEeCcCCCcccC
Confidence 7999999999998 8999999999999999998874 34454
No 40
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=4.6e-87 Score=676.42 Aligned_cols=403 Identities=27% Similarity=0.437 Sum_probs=375.3
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCcc-CCC---CCCCceeE
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT-APA---DGPYHVQT 76 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~-~~~---~~~~~~~~ 76 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..+++..|+..+++.+++++..+++..... .+. ..+...+.
T Consensus 47 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (457)
T 3lns_A 47 ADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYV 126 (457)
T ss_dssp CSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEE
Confidence 57899999999999999999999999999999999999875699999999999998876654321 111 12456889
Q ss_pred eeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhc
Q 014515 77 LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS 156 (423)
Q Consensus 77 ~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~ 156 (423)
.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++|+++| +.+.+..|++
T Consensus 127 ~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~L~~ 204 (457)
T 3lns_A 127 VQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS 204 (457)
T ss_dssp EEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHH-CCTTTEEECCC-CHHHHHHHTT
T ss_pred EeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh-CCHhhEEEecC-CHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999999 99999999999 6778899998
Q ss_pred ccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCcc
Q 014515 157 HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 236 (423)
Q Consensus 157 ~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~ 236 (423)
+++|.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++
T Consensus 205 -~~vd~V~fTGS~~~G~~i~~~aa~-~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i 282 (457)
T 3lns_A 205 -LPFDFIFFTGSPNVGKVVMQAAAK-HLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSV 282 (457)
T ss_dssp -SCCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGG
T ss_pred -CCCCEEEEECCHHHHHHHHHHHhh-ccCceEEECCCCCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHH
Confidence 689999999999999999999887 799999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCccc
Q 014515 237 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDML 316 (423)
Q Consensus 237 ~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~ 316 (423)
+|+|+++|++++++++ |.++ ++||+++.++++++.++++++ ++++++||... ..|+|++|||+.+++++|+
T Consensus 283 ~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~~rv~~~i~~a---~~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~ 353 (457)
T 3lns_A 283 KDALLERLVERVKTEL---PEIN--STGKLVTERQVQRLVSLLEAT---QGQVLVGSQAD-VSKRALSATVVDGVEWNDP 353 (457)
T ss_dssp HHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHHHHHHHHHHHC---CSEEEECCCEE-GGGTEECCEEEESCCTTSG
T ss_pred HHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHHHHHHHHHHhc---CCeEEeCCccC-CCCceeCCEEEecCCCCCh
Confidence 9999999999999987 6666 999999999999999999986 35999999753 3689999999999999999
Q ss_pred ccccccccCeeEEEecCCHHHHHHHHhc-CCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCCCCCCCC
Q 014515 317 IAKDEIFGPVQSILKYKDLDEVIQRSNA-SQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQS 393 (423)
Q Consensus 317 ~~~~E~fgPvl~v~~~~~~~eai~~~n~-~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~~~S 393 (423)
+++||+||||++|++|+|+||||+++|+ ++|||++||||+|.++++++++++++|+|+||++.. ..+.+||||+|.|
T Consensus 354 i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~S 433 (457)
T 3lns_A 354 LMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGAS 433 (457)
T ss_dssp GGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEEECSCHHHHHHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGG
T ss_pred hhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcC
Confidence 9999999999999999999999999999 999999999999999999999999999999999743 5688999999999
Q ss_pred CCCCcchHHHHHhhheeeEEEEe
Q 014515 394 GQGREKGSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 394 G~g~~~g~~~l~~~~~~k~v~~~ 416 (423)
|+|+++|.+|+++||+.|+|++.
T Consensus 434 G~G~~~g~~~~~~f~~~k~v~~~ 456 (457)
T 3lns_A 434 GMGEYHGHFSYLTFTHKKSVRIV 456 (457)
T ss_dssp EECCBSHHHHHHHTEEEEEEEEC
T ss_pred CCCCCchHHHHHHhhCeeEEEeC
Confidence 99999999999999999999764
No 41
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=8.8e-87 Score=679.42 Aligned_cols=407 Identities=29% Similarity=0.395 Sum_probs=382.0
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..++.. |+..+++.+++++...+...+...+...+...+..++|
T Consensus 61 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 139 (490)
T 3ju8_A 61 RPLEQRIELLERFAATLKSRADELARVIGEETGKPLWESAT-EVTSMVNKVAISVQAFRERTGEKSGPLADATAVLRHKP 139 (490)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHSCCEEEEETTEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCeeeEEECC
Confidence 57899999999999999999999999999999999999874 99999999999998887766654332223456777999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++++++| +.+.++.|+.||++
T Consensus 140 ~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v 218 (490)
T 3ju8_A 140 HGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGL 218 (490)
T ss_dssp CSEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCC-SHHHHHHHHTCTTC
T ss_pred CCEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHHhCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999 67889999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCce-EEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCcc-HH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPV-TLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV-YD 238 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~-~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~ 238 (423)
|.|+||||+.+|+.|++.++. +++|+ ++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||+++ +|
T Consensus 219 ~~V~fTGS~~~g~~i~~~aa~-~~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d 297 (490)
T 3ju8_A 219 DGLFFTGSSRTGNLLHSQFGG-QPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGD 297 (490)
T ss_dssp SEEEEESCHHHHHHHHHHTTT-CTTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHH
T ss_pred CEEEEECcHHHHHHHHHHhhc-cCCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHH
Confidence 999999999999999999887 78998 8999999999999999999999999999999999999999999999996 99
Q ss_pred HHHHHHHHHHhhcccCC-CCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCcccc
Q 014515 239 QFVEKANALAMKRVVGD-PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLI 317 (423)
Q Consensus 239 ~f~~~l~~~~~~~~~g~-p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~ 317 (423)
+|+++|+++++++++|+ |.|+++++||+++..+++++.+++++++++|+++++||...+..|+|++|||+. +++++++
T Consensus 298 ~f~~~l~~~~~~~~~G~~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i 376 (490)
T 3ju8_A 298 ALLARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAER 376 (490)
T ss_dssp HHHHHHHHHHHHCCBCCTTCSSCCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSC
T ss_pred HHHHHHHHHHHhccCCCCCCCCcCccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCCCcc
Confidence 99999999999999999 999999999999999999999999999999999999998766679999999999 9999999
Q ss_pred cccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC-CCCCCCCCCCCCCCCC
Q 014515 318 AKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQG 396 (423)
Q Consensus 318 ~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~pfgG~~~SG~g 396 (423)
++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++.. ..+.+||||+|.||.+
T Consensus 377 ~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~~~SG~~ 456 (490)
T 3ju8_A 377 PDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNH 456 (490)
T ss_dssp CCCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSSCCCTTSEECCCGGGBSS
T ss_pred ccccccccEEEEEEeCCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcCCCCCCCCcCCccccchh
Confidence 999999999999999999999999999999999999999999999999999999999999765 3578999999999974
Q ss_pred CcchHHHHHhhheeeEEEEec
Q 014515 397 REKGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 397 ~~~g~~~l~~~~~~k~v~~~~ 417 (423)
++++|++.|+|+++.
T Consensus 457 ------~~~~~~~~k~v~~~~ 471 (490)
T 3ju8_A 457 ------RPSAYYAADYCAYPV 471 (490)
T ss_dssp ------CCEETTHHHHHEEEE
T ss_pred ------HHHhhheeEEEEEec
Confidence 589999999888775
No 42
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=2.1e-86 Score=718.13 Aligned_cols=415 Identities=31% Similarity=0.507 Sum_probs=392.0
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCC-CCCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 79 (423)
+|.++|+++|+++++.|++++++|++++++|+|||..++.. |+..+++++++++.++++..+...+. ..+..++..++
T Consensus 587 ~~~~eRa~iL~~~Adll~~~~~eLa~~~~~E~GK~~~ea~~-Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~ 665 (1026)
T 4f9i_A 587 TDPRTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQAYA-DVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYE 665 (1026)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEee
Confidence 57899999999999999999999999999999999999875 99999999999999988776544322 34567788999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||+
T Consensus 666 PlGVV~~I~PwNfPl~i~~~~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~ 745 (1026)
T 4f9i_A 666 PKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPD 745 (1026)
T ss_dssp ECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTT
T ss_pred cCceEEEeCCCccHHHHHHHHHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999988889999999999
Q ss_pred cceEeeecCchHHHHHHHHHhh-----CCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeC
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHE 234 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~-----~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~ 234 (423)
|+.|+||||+.+|+.|++.++. .+++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++++|||+
T Consensus 746 v~~V~FTGSt~vg~~I~~~aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~ 825 (1026)
T 4f9i_A 746 ISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLD 825 (1026)
T ss_dssp EEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEG
T ss_pred CCEEEeCCCHHHHHHHHHHhhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecH
Confidence 9999999999999999999873 36799999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCc
Q 014515 235 SVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDD 314 (423)
Q Consensus 235 ~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~ 314 (423)
+++|+|+++|+++++++++|+|.|+++++||+++..+++++.++|++++++| ++++||..++..|+|++|||+.+++++
T Consensus 826 ~i~d~f~~~L~~~~~~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~~G~fv~PTvl~~v~~~ 904 (1026)
T 4f9i_A 826 AVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAGEGYFVPMTIIGGIKPE 904 (1026)
T ss_dssp GGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSSSSCCCCCEEEESCCTT
T ss_pred HHHHHHHHHHHHHHHhcccCCcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCCCCceecceeeecCCCC
Confidence 9999999999999999999999999999999999999999999999999988 999999765545999999999999999
Q ss_pred ccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC--CCCCCCCCCCC
Q 014515 315 MLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQ 392 (423)
Q Consensus 315 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~pfgG~~~ 392 (423)
+++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+.++. .+.+||||+|.
T Consensus 905 ~~i~~eEiFGPVl~V~~~~d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~ 984 (1026)
T 4f9i_A 905 HRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARM 984 (1026)
T ss_dssp SGGGTSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGG
T ss_pred ccccCceecCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCc
Confidence 9999999999999999999999999999999999999999999999999999999999999997643 47799999999
Q ss_pred CCCC-CcchHHHHHhhheeeEEEEec
Q 014515 393 SGQG-REKGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 393 SG~g-~~~g~~~l~~~~~~k~v~~~~ 417 (423)
||+| +.+|++++++|++.|+|+++.
T Consensus 985 SG~G~~~gG~~~l~~f~~~k~v~~~~ 1010 (1026)
T 4f9i_A 985 SGVGTKAGGPDYLLHFMDPRVVTENT 1010 (1026)
T ss_dssp GBSSCCBTSTTTGGGGEEEEEEEEEC
T ss_pred CCCCCCcCCHHHHHHhceEEEEEEec
Confidence 9999 478999999999999998875
No 43
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=1.1e-85 Score=677.89 Aligned_cols=411 Identities=25% Similarity=0.340 Sum_probs=372.4
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCcc-------CCCC--CC
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT-------APAD--GP 71 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~-------~~~~--~~ 71 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..++.. |+..+++.+++++.+.+++.+.. .+.. ..
T Consensus 63 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~ 141 (534)
T 2y53_A 63 LTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAV-DIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRS 141 (534)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSS
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCc
Confidence 57899999999999999999999999999999999999875 99999999999998876654311 1211 11
Q ss_pred CceeEeeccc-eeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcC-CCCCcEEEEeCCchh
Q 014515 72 YHVQTLHEPI-GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPT 149 (423)
Q Consensus 72 ~~~~~~~~P~-Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag-~P~g~v~~v~~~~~~ 149 (423)
...+..++|+ |||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++| +|+|++|+++|++.+
T Consensus 142 ~~~~~~~~P~~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~ 221 (534)
T 2y53_A 142 FSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAG 221 (534)
T ss_dssp EEEEEEEEECSSCEEEECCTTCTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTT
T ss_pred ccceEEEecCCCEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHH
Confidence 2357889997 99999999999999999999999999999999999999999999999999999 899999999986544
Q ss_pred HHHHhhcccCcceEeeecCchHHHHHHHHHh-hCCCCceEEecCCcceEEEcCCC-----CHHHHHHHHHHHHHhccCCc
Q 014515 150 AGAALASHMEVDKLAFTGSTTTGKIVLQLAA-KSNLKPVTLELGGKSPFIVCEDA-----DVDKAAELAHYALFFNQGQC 223 (423)
Q Consensus 150 ~~~~l~~~~~v~~v~~tGs~~~~~~v~~~~a-~~~~~~~~~e~gg~~~~iv~~~a-----d~~~aa~~iv~~~~~~~Gq~ 223 (423)
++..| +++|+|+||||+.+|+.|++.++ ..++||+++|+|||||+||++|| |++.|++.+++++|.|+||.
T Consensus 222 l~~~l---~~vd~V~FTGS~~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~ 298 (534)
T 2y53_A 222 LLDQI---RSFDVVSFTGSADTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQK 298 (534)
T ss_dssp SGGGC---CTTCEEEEESCHHHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCC
T ss_pred HHhcc---cccCEEEEECCHHHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCc
Confidence 33322 57999999999999999998764 23789999999999999999999 99999999999999999999
Q ss_pred ccCCCeEEEeCccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC------
Q 014515 224 CCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG------ 297 (423)
Q Consensus 224 C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~------ 297 (423)
|+++++||||++++|+|+++|+++++++++|+|.|+++++||++++.++++++++|+++ .+|+++++||....
T Consensus 299 C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~ 377 (534)
T 2y53_A 299 CTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADA 377 (534)
T ss_dssp TTSEEEEEEEGGGHHHHHHHHHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCT
T ss_pred ccCCCEEEEeccHHHHHHHHHHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccC
Confidence 99999999999999999999999999999999999999999999999999999999999 68999999997421
Q ss_pred CCCceeecEEEecCCCc--ccccccccccCeeEEEecC---CH-----HHHHHHHhcCCCCceEEEecCCHHHHHHHHHh
Q 014515 298 AKGYYIKPTVFTGVKDD--MLIAKDEIFGPVQSILKYK---DL-----DEVIQRSNASQYGLAAGVFTHNLDTANTLMRA 367 (423)
Q Consensus 298 ~~g~~~~Ptvl~~~~~~--~~~~~~E~fgPvl~v~~~~---~~-----~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~ 367 (423)
..|+|++|||+.+++++ +++++||+||||++|++|+ |+ ||||+++|+++|||++||||+|.+++++++++
T Consensus 378 ~~g~~~~PTvl~~v~~~~~~~i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~ 457 (534)
T 2y53_A 378 NIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALE 457 (534)
T ss_dssp TTSCCCCCEEEECSCGGGCSSTTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHH
T ss_pred CCCceecCEEEEecCccccCHHHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHH
Confidence 35899999999999887 5899999999999999999 99 99999999999999999999999999999999
Q ss_pred c--ceeEEEEcCcCC---------CCCCCCCCCCCCCCCCCc-chHHHHHhhheeeEEEEe
Q 014515 368 L--RVGSVWINCFDV---------FDAAIPFGGYKQSGQGRE-KGSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 368 l--~~g~v~iN~~~~---------~~~~~pfgG~~~SG~g~~-~g~~~l~~~~~~k~v~~~ 416 (423)
+ ++|+|+||++.. ..+.+||||+|.||+|++ +|.+++++|++.|++...
T Consensus 458 l~~~aG~V~vN~~~~~~~~~~~~~~~~~~pfGG~k~SG~Gr~~~g~~~l~~~~~~k~v~~~ 518 (534)
T 2y53_A 458 LADSHGRVHAISPSVQHSQTGHGNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQAA 518 (534)
T ss_dssp HTTTEEEEEEECGGGTTTCCCSSCCCTTSEECCSGGGCSCCEESGGGGGGGGEEEEEEEEE
T ss_pred HHhhCCEEEEcCCcccccccccCCCCCCCCCCCcccCCCCCCcchHHHHHHHhhhheeecC
Confidence 9 899999998642 357899999999999999 699999999999998764
No 44
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=5.4e-84 Score=697.78 Aligned_cols=410 Identities=30% Similarity=0.449 Sum_probs=384.4
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCcc--CCCCCCCceeEee
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT--APADGPYHVQTLH 78 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 78 (423)
+|.++|+++|+++++.|+++.++|++++++|+|||..++.. |+..+++.+++++.+.++..+.. .+...+...+..+
T Consensus 569 ~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~~-Ev~~ai~~lr~~a~~a~~~~g~~~~~~~~~g~~~~~~~ 647 (1001)
T 3haz_A 569 TPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALS-ELREAADFCRYYAAQGRKLFGSETAMPGPTGESNALTM 647 (1001)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHSSCEECCCCTTEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHH-HHHHHHHHHHHHHHHHHhhcCccccccCCCCCceEEEE
Confidence 57899999999999999999999999999999999999875 99999999999999888766543 3344567788999
Q ss_pred ccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhccc
Q 014515 79 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHM 158 (423)
Q Consensus 79 ~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~ 158 (423)
+|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++.+ +..|+.||
T Consensus 648 ~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~eAGlP~gvv~vV~G~g~~-g~~L~~~p 726 (1001)
T 3haz_A 648 RGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGDGRI-GAALTAHP 726 (1001)
T ss_dssp EECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHHTCCTTTEEECCCCHHH-HHHHHHCT
T ss_pred eCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHHHhCcCcCcEEEEecCchH-HHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999997777 99999999
Q ss_pred CcceEeeecCchHHHHHHHHHhhC--CCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCcc
Q 014515 159 EVDKLAFTGSTTTGKIVLQLAAKS--NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 236 (423)
Q Consensus 159 ~v~~v~~tGs~~~~~~v~~~~a~~--~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~ 236 (423)
+|+.|+||||+.+|+.|++.++++ .++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++
T Consensus 727 ~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~~iv~s~f~naGQ~C~A~~rllV~e~i 806 (1001)
T 3haz_A 727 DIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQEDV 806 (1001)
T ss_dssp TCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHH
T ss_pred CcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHHHHHHHHHHhCCCCCCCCCceeeccHHH
Confidence 999999999999999999998863 479999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCccc
Q 014515 237 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDML 316 (423)
Q Consensus 237 ~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~ 316 (423)
+|+|+++|+++++++++|+|.++++++||+++..+++++.++|++++++| ++ +||..+ ..|+|+.|||+.. +++.
T Consensus 807 ~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v-~gg~~~-~~G~fv~PTvl~~--~~~~ 881 (1001)
T 3haz_A 807 ADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL-HFAGPA-PEGCFVAPHIFEL--TEAG 881 (1001)
T ss_dssp HHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE-EEECCC-CSSSCCCCEEEEC--SSGG
T ss_pred HHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE-eccccC-CCCcEEeeEEecC--CCHH
Confidence 99999999999999999999999999999999999999999999999888 88 888754 3599999999974 6788
Q ss_pred ccccccccCeeEEEecCC--HHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC--CCCCCCCCCCC
Q 014515 317 IAKDEIFGPVQSILKYKD--LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQ 392 (423)
Q Consensus 317 ~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~pfgG~~~ 392 (423)
+++||+||||++|++|++ +||||+++|+++|||+++|||+|.++++++++++++|+|+||+.+.. .+.+||||+|.
T Consensus 882 ~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~l~aG~V~VN~~~~~~~~~~~PFGG~k~ 961 (1001)
T 3haz_A 882 QLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQPFGGNGL 961 (1001)
T ss_dssp GCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCCGG
T ss_pred HHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHhCCeeeEEEeCCCcCCCCCCCCCCCccc
Confidence 999999999999999996 89999999999999999999999999999999999999999997643 35789999999
Q ss_pred CCCC-CcchHHHHHhhheeeEEEEec
Q 014515 393 SGQG-REKGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 393 SG~g-~~~g~~~l~~~~~~k~v~~~~ 417 (423)
||+| +++|++++++|++.|+|+++.
T Consensus 962 SG~G~~~gG~~gl~~ft~~K~v~~~~ 987 (1001)
T 3haz_A 962 SGTGPKAGGPHYLARFATEQTVTINT 987 (1001)
T ss_dssp GBCCCCBTSTTSGGGGEEEEEEEEEC
T ss_pred CcCCCCCCCHHHHHHhceeeEEEECC
Confidence 9999 578999999999999998874
No 45
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=7e-81 Score=638.88 Aligned_cols=398 Identities=20% Similarity=0.306 Sum_probs=361.1
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhh--hcCccC----CC--CCC-
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK--IQGLTA----PA--DGP- 71 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~--~~~~~~----~~--~~~- 71 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..++.. |+..+++.+++++..+++ ...... +. ..+
T Consensus 49 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (510)
T 1ez0_A 49 LNNSKRASLLRTIASELEARSDDIIARAHLETALPEVRLTG-EIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPK 127 (510)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCB
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHhCccccccccccccccCCCCC
Confidence 57899999999999999999999999999999999988764 999999999999988765 322211 11 111
Q ss_pred CceeEeeccceeEEEEccCchhHHhH--HHhhhhhhccCCeEEEeCCCCchHHHHHHHHHH----HHcCCCCCcEEEEeC
Q 014515 72 YHVQTLHEPIGVAGQIIPWNFPLLMF--AWKVGPALACGNTIVLKTAEQTPLSALYVSKLL----HEAGLPPGVLNIVSG 145 (423)
Q Consensus 72 ~~~~~~~~P~Gvv~~i~p~n~P~~~~--~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l----~~ag~P~g~v~~v~~ 145 (423)
...+.+++|+|||++|+|||||+... .+++++||++||+||+|||+.+|.++..+.+++ .++|+|+|++|+++|
T Consensus 128 ~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g 207 (510)
T 1ez0_A 128 PDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQG 207 (510)
T ss_dssp CCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECC
T ss_pred CCceEEEecCcEEEEECCccchhhhhhhHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 23578999999999999999999985 499999999999999999999999999999988 567999999999999
Q ss_pred CchhHHHHhhcccCcceEeeecCchHHHHHHHHHhhCCC--CceEEecCCcceEEEcCCCCHH--HHHHHHHHHHHhccC
Q 014515 146 YGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL--KPVTLELGGKSPFIVCEDADVD--KAAELAHYALFFNQG 221 (423)
Q Consensus 146 ~~~~~~~~l~~~~~v~~v~~tGs~~~~~~v~~~~a~~~~--~~~~~e~gg~~~~iv~~~ad~~--~aa~~iv~~~~~~~G 221 (423)
.+.+.++.|+.||+||+|+||||+.+|+.|++.+++ ++ +|+++|+|||||+||++|||++ .|++.+++++|.|+|
T Consensus 208 ~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~-~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~G 286 (510)
T 1ez0_A 208 NQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHE-RPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCG 286 (510)
T ss_dssp SCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHH-SSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGG
T ss_pred CcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHhhc-cCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCC
Confidence 778899999999999999999999999999999987 54 9999999999999999999999 999999999999999
Q ss_pred CcccCCCeEEEeCc-cHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHh-CCCEEEeCCcccCCC
Q 014515 222 QCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD-GGAKLETGGERLGAK 299 (423)
Q Consensus 222 q~C~a~~~v~V~~~-~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~-~ga~~~~gg~~~~~~ 299 (423)
|.|+++++||||++ ++|+|+++|+++++++++ ||++++.+.+++.++++++++ +|+++++||. .
T Consensus 287 Q~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~----------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~----~ 352 (510)
T 1ez0_A 287 QFCTKPGVVFALNTPETQAFIETAQSLIRQQSP----------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA----E 352 (510)
T ss_dssp CCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCC----------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC----C
T ss_pred CCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCC----------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC----C
Confidence 99999999999999 999999999999998764 688999999999999999984 7999999997 2
Q ss_pred CceeecEEEecCCCc---ccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCH--HHHHHHHHhc--ceeE
Q 014515 300 GYYIKPTVFTGVKDD---MLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL--DTANTLMRAL--RVGS 372 (423)
Q Consensus 300 g~~~~Ptvl~~~~~~---~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~--~~~~~~~~~l--~~g~ 372 (423)
|+|++|||+.+++++ +++++||+||||++|++|+|+||||+++|+++|||++||||+|. ++++++++++ ++|+
T Consensus 353 g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~ 432 (510)
T 1ez0_A 353 SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGR 432 (510)
T ss_dssp TTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEE
T ss_pred CCEecCEEEEecCCccccCHHHcCCccCCeEEEEEeCCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccE
Confidence 899999999887777 99999999999999999999999999999999999999999987 7999999999 7999
Q ss_pred EEEcCcCC---CCCCCCCCC-CCCCCCCC--cchHHHHHhhheeeEEE
Q 014515 373 VWINCFDV---FDAAIPFGG-YKQSGQGR--EKGSYSLSNYLQVKAVV 414 (423)
Q Consensus 373 v~iN~~~~---~~~~~pfgG-~~~SG~g~--~~g~~~l~~~~~~k~v~ 414 (423)
|+||+++. ..+.+|||| +|.||+|+ ++|.+|+++|++.|++.
T Consensus 433 V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~~G~~gl~~~~~~k~~~ 480 (510)
T 1ez0_A 433 LVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAEAIHRWLRPVAYQ 480 (510)
T ss_dssp EEESSCSSCCCCSSSCCCCCSTTSCSCSSCCSSSGGGGGGGEEEEEEE
T ss_pred EEECCCCccCccCCCCCCCCCCCCcCCCCCCCccHHHHHHhheEEEEc
Confidence 99998764 457899999 79999985 47999999999998753
No 46
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.5e-81 Score=643.67 Aligned_cols=402 Identities=23% Similarity=0.320 Sum_probs=363.6
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhh--cCccC----CC---CCC
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI--QGLTA----PA---DGP 71 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~--~~~~~----~~---~~~ 71 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..++.. |+..+++.+++++..+++. ..... +. ..+
T Consensus 82 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (528)
T 3v4c_A 82 SSRKERAAFLRAIADEIEARAEAITEIGSQETGLPEARLNG-ERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPR 160 (528)
T ss_dssp CCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCB
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHhhccccccccccccccccCCCC
Confidence 57899999999999999999999999999999999999875 9999999999999888662 22211 11 123
Q ss_pred CceeEeeccceeEEEEccCchhHHhHH--HhhhhhhccCCeEEEeCCCCchHHHHHHHHHH----HHcCCCCCcEEEEeC
Q 014515 72 YHVQTLHEPIGVAGQIIPWNFPLLMFA--WKVGPALACGNTIVLKTAEQTPLSALYVSKLL----HEAGLPPGVLNIVSG 145 (423)
Q Consensus 72 ~~~~~~~~P~Gvv~~i~p~n~P~~~~~--~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l----~~ag~P~g~v~~v~~ 145 (423)
...+..++|+|||++|+|||||+...+ +++++||++||+||+|||+.+|.++..+++++ .++|+|+|++|+++|
T Consensus 161 ~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g 240 (528)
T 3v4c_A 161 QEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQG 240 (528)
T ss_dssp CCEEEEEEECSCEEEECCSSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECC
T ss_pred CcceeEeeCCcEEEEECCCcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeC
Confidence 456889999999999999999999865 89999999999999999999999999998875 468999999999999
Q ss_pred CchhHHHHhhcccCcceEeeecCchHHHHHHHHHhhCCC--CceEEecCCcceEEEcCCC---CHHHHHHHHHHHHHhcc
Q 014515 146 YGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL--KPVTLELGGKSPFIVCEDA---DVDKAAELAHYALFFNQ 220 (423)
Q Consensus 146 ~~~~~~~~l~~~~~v~~v~~tGs~~~~~~v~~~~a~~~~--~~~~~e~gg~~~~iv~~~a---d~~~aa~~iv~~~~~~~ 220 (423)
.+.+.++.|+.||+||.|+||||+.+|+.|++.+++ ++ +|+++|+|||||+||++|| |++.|++.+++++|.|+
T Consensus 241 ~~~~~g~~L~~~p~v~~V~fTGS~~~G~~i~~~aa~-~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~ 319 (528)
T 3v4c_A 241 GSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAA-RPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGA 319 (528)
T ss_dssp CCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHH-SSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred CCHHHHHHHHhCCCCCEEEEECChHHHHHHHHHHhh-ccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcC
Confidence 888899999999999999999999999999999987 77 8999999999999999999 88999999999999999
Q ss_pred CCcccCCCeEEEeCc-cHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCC
Q 014515 221 GQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 299 (423)
Q Consensus 221 Gq~C~a~~~v~V~~~-~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~ 299 (423)
||.|+++++||||++ ++|+|+++|++++++++.| +.+||+++..+.+++.++++ ++|+++++||.. .
T Consensus 320 GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~~------~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~---~ 387 (528)
T 3v4c_A 320 GQFCTNPGIAVVIEGADADRFTTAAVEALAKVAPQ------TMLTDGIAKAYRDGQARFAT---RNAVKPLLATES---S 387 (528)
T ss_dssp GCCTTCCCEEEEESSHHHHHHHHHHHHHHHTCCCE------ECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC---C
T ss_pred CCccccCcEEEEecccHHHHHHHHHHHHHHhcccC------CCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc---C
Confidence 999999999999997 9999999999999988654 57899998888887777764 479999999974 6
Q ss_pred CceeecEEEecCCCc---ccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecC--CHHHHHHHHHhcc--eeE
Q 014515 300 GYYIKPTVFTGVKDD---MLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH--NLDTANTLMRALR--VGS 372 (423)
Q Consensus 300 g~~~~Ptvl~~~~~~---~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~--d~~~~~~~~~~l~--~g~ 372 (423)
|+|++|||+.+++++ |++++||+||||++|++|+|+||||+++|+++|||++||||+ |.+++++++++++ +|+
T Consensus 388 g~~~~PTvl~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~ 467 (528)
T 3v4c_A 388 GRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGR 467 (528)
T ss_dssp TTEECCEEEEEEHHHHHHCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEE
T ss_pred CceeccEEEEecCcccccChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcE
Confidence 899999999988777 899999999999999999999999999999999999999999 8999999999998 999
Q ss_pred EEEcCcCC---CCCCCCCCC-CCCCCCCCcc--hHHHHHhhheeeEEEEec
Q 014515 373 VWINCFDV---FDAAIPFGG-YKQSGQGREK--GSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 373 v~iN~~~~---~~~~~pfgG-~~~SG~g~~~--g~~~l~~~~~~k~v~~~~ 417 (423)
|+||++++ ..+.+|||| +|.||+|+++ |++|+++|++.|++ .++
T Consensus 468 V~vN~~~~~~~~~~~~pfGG~~~~Sg~gr~~~~G~~gl~~~~~~k~~-q~~ 517 (528)
T 3v4c_A 468 VLVNGFPTGVEVVDSMVHGGPYPASTNFGATSVGTMSIRRFLRPVAY-QNM 517 (528)
T ss_dssp EEESSCTTCCCCSTTCCCCCTTTTBSCTTCCSSSGGGGGGGEEEEEE-ESC
T ss_pred EEEcCCCCCCccCCCCCCCCCCCCCCCCCCCCCcHHHHHHhchhHHh-hcC
Confidence 99999764 357899999 9999999975 99999999999874 443
No 47
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=3.9e-76 Score=597.54 Aligned_cols=393 Identities=15% Similarity=0.208 Sum_probs=345.9
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcC-ccCCCCCCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG-LTAPADGPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++...+...+++.+ ..++..... ...+.+.+...+..++
T Consensus 31 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~ 107 (464)
T 3k9d_A 31 MSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHV---YNYIKDMKTIGMLKEDNEKKVMEVAV 107 (464)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHH---HHHHTTCCCSEEEEEETTTTEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHH---HHhhhcccccceeccCCCceeEEEEe
Confidence 578999999999999999999999999999999998886543444444433 333322211 1112234567889999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHH----HHHHHcCCCCCcEEEEeCCchhHHHHhh
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVS----KLLHEAGLPPGVLNIVSGYGPTAGAALA 155 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~----~~l~~ag~P~g~v~~v~~~~~~~~~~l~ 155 (423)
|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..++ +++.++|+|+|+++++++++.+.++.|+
T Consensus 108 P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~~~~~aG~P~gvv~vv~g~~~~~~~~L~ 187 (464)
T 3k9d_A 108 PLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPTIQGTDQLM 187 (464)
T ss_dssp ECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEEECSSCCHHHHHHHH
T ss_pred cceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999865 4568899999999999998888999999
Q ss_pred cccCcceEeeecCchHHHHHHHHHhhCCCCceEEecC-CcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeC
Q 014515 156 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG-GKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHE 234 (423)
Q Consensus 156 ~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~g-g~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~ 234 (423)
.||+||.|+||||+.+ .+.++. ++||+ +|+| ||+|+||++|||++.|++.+++++|+|+||.|+++++||||+
T Consensus 188 ~~~~vd~I~fTGs~~v----~~~a~~-~~kpv-lelG~G~~p~iV~~dADl~~Aa~~i~~~~~~n~Gq~C~a~~rvlV~~ 261 (464)
T 3k9d_A 188 KHKDTAVILATGGSAM----VKAAYS-SGTPA-IGVGPGNGPAFIERSANIPRAVKHILDSKTFDNGTICASEQSVVVER 261 (464)
T ss_dssp HCTTEEEEEECSCHHH----HHHHTT-SSSCE-EEBCCCCCEEEECTTSCHHHHHHHHHHHHTGGGGCSTTSCCEEEEEH
T ss_pred hCCCCCEEEEeCChHH----HHHHHh-cCCcE-EeeCCCCCeEEECCCCCHHHHHHHHHHHHhcCCCCCCCCCcEEEEeH
Confidence 9999999999999984 444554 78999 7887 999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHH-------hhcccCCCC-CCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecE
Q 014515 235 SVYDQFVEKANALA-------MKRVVGDPF-KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPT 306 (423)
Q Consensus 235 ~~~~~f~~~l~~~~-------~~~~~g~p~-~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Pt 306 (423)
++||+|+++|+++. +.+++|+|. ++++++||+++.++++++.++++.++.+|+++++||..
T Consensus 262 ~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~~~a~~~ga~vl~gg~~----------- 330 (464)
T 3k9d_A 262 VNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVPADARVLIAEET----------- 330 (464)
T ss_dssp HHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHTTCCCCTTCCEEEEECC-----------
T ss_pred HHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHhhhhhcCCCEEEEcCCC-----------
Confidence 99999999999875 467889887 78899999999999999999999988899999999863
Q ss_pred EEecCCCcccccccccccCeeEEEecCCHHHHH----HHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--
Q 014515 307 VFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVI----QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-- 380 (423)
Q Consensus 307 vl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai----~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~-- 380 (423)
++++++++. +|+||||++|++|+|+|||| +++|+++|||++||||+|.++++++++++++|+|+||++..
T Consensus 331 ---~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t~d~~~a~~~~~~l~~G~v~vN~~~~~~ 406 (464)
T 3k9d_A 331 ---KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRLLVNTPGALG 406 (464)
T ss_dssp ---CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHSSEEEEEESSCHHHH
T ss_pred ---CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHhCCEeEEEEECCcccc
Confidence 356677754 89999999999999999997 79999999999999999999999999999999999999764
Q ss_pred -------CCCCCCCCCCCCCCCCCcchHHHHHhhheeeEEEEecC
Q 014515 381 -------FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 418 (423)
Q Consensus 381 -------~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~v~~~~~ 418 (423)
..+.+|||| |.+|.|.++|..|+++|++.|+|..+.+
T Consensus 407 ~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~~~ 450 (464)
T 3k9d_A 407 GIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATGVL 450 (464)
T ss_dssp HTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEECCC
T ss_pred ccccCCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEecCC
Confidence 468899998 7899999999999999999999988764
No 48
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=2.2e-77 Score=605.41 Aligned_cols=377 Identities=17% Similarity=0.186 Sum_probs=306.7
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCCh----hhhhhchHHH-HHHHHHHHHHHhhhhc------CccCCC-
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPF----EQSAQTEVPM-TTRLFRYYAGWADKIQ------GLTAPA- 68 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~----~~~~~~ev~~-~~~~l~~~~~~~~~~~------~~~~~~- 68 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||. .++...|+.. ++..+++++.+++... +...+.
T Consensus 33 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~~~~~~~~~~~~g~~~~~~ 112 (468)
T 1vlu_A 33 ISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQGIKDVAELEDPVGKVKMAR 112 (468)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHHHHHHHHSCCSSSCEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHHHHHHhhcCCCCCeecccc
Confidence 578999999999999999999999999999999998 7775458888 8888999888776654 332221
Q ss_pred --CCCCceeEeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHH----H----cCCCCC
Q 014515 69 --DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH----E----AGLPPG 138 (423)
Q Consensus 69 --~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~----~----ag~P~g 138 (423)
+.+...+..++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++..+.+++. + +|+|+|
T Consensus 113 ~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aL~e~~~~aGlP~g 190 (468)
T 1vlu_A 113 ELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVG 190 (468)
T ss_dssp EEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHHHHHHHCCCTT
T ss_pred cCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHHHHhhchhcCCCCC
Confidence 12345688999999999999999 9 9999999999999999999999999999999999995 8 899999
Q ss_pred cEEEEeCCchhHHHHhhcccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHh
Q 014515 139 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 218 (423)
Q Consensus 139 ~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~ 218 (423)
++|+++ ++++.++.|..||+||.|+||||+.+|+.|++.+ ++|+++|+|||||+||++|||++.|++.+++++|.
T Consensus 191 vv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a----~kpv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~ 265 (468)
T 1vlu_A 191 SVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT----KIPVLGHADGICSIYLDEDADLIKAKRISLDAKTN 265 (468)
T ss_dssp SEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC----CSCBTTBCSCCEEEEECTTCCHHHHHHHHHHTTCC
T ss_pred cEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc----CCCEEeecCCccceEECCCCCHHHHHHHHHHHhcC
Confidence 999999 6667899999999999999999999999998764 68999999999999999999999999999999999
Q ss_pred ccCCcccCCCeEEEeCccHHHHHHHHHHHHhhccc---CCCCCCCCcccCCCCHHHHHHHHHH-HHHHHhCCCEEEeCCc
Q 014515 219 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV---GDPFKGGIQQGPQIDSEQFEKILKY-IRSGVDGGAKLETGGE 294 (423)
Q Consensus 219 ~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~---g~p~~~~~~~gp~~~~~~~~~~~~~-i~~a~~~ga~~~~gg~ 294 (423)
|+| .|+++++||||+++ |+|+++|+++++++++ |+|.+ +++ +++++ ++++||+
T Consensus 266 n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~-----------------~~~~i~~a~----~~~~gG~ 322 (468)
T 1vlu_A 266 YPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL-----------------KTAYFDKLN----ELGKLTE 322 (468)
T ss_dssp -----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH-----------------HHHHHHHHH----HHTCCCH
T ss_pred CCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH-----------------hcccccccc----eeeccCC
Confidence 999 99999999999999 9999999999999987 87643 345 66654 3566775
Q ss_pred ccCCCCceeecEEEecCCCcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEE
Q 014515 295 RLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVW 374 (423)
Q Consensus 295 ~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~ 374 (423)
| +.||++ +++++.+++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+
T Consensus 323 -----g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~ 393 (468)
T 1vlu_A 323 -----A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVY 393 (468)
T ss_dssp -----H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHCCCSEEE
T ss_pred -----C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCeeEEE
Confidence 4 689987 6789999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCcCCCCCCCCCC-----CCCCCCCCCcchHHHHHhhheeeEEEEec
Q 014515 375 INCFDVFDAAIPFG-----GYKQSGQGREKGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 375 iN~~~~~~~~~pfg-----G~~~SG~g~~~g~~~l~~~~~~k~v~~~~ 417 (423)
||++....+.+||| |+|.||+|++ |.+|+++|++.|+|+++.
T Consensus 394 vN~~~~~~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~~ 440 (468)
T 1vlu_A 394 WNASTRFADGFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRGD 440 (468)
T ss_dssp ESSCGGGCC-----------------------CCSGGGEEEEEEEECS
T ss_pred EcCCCCCCCCCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEECC
Confidence 99987777889999 9999999999 999999999999998763
No 49
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=5.1e-75 Score=587.43 Aligned_cols=366 Identities=20% Similarity=0.198 Sum_probs=314.7
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHc-------CCChh----hhhhchHHHHHHHHHHHHHHhhhhcCccCCCC
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDN-------GKPFE----QSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD 69 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~-------Gk~~~----~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~ 69 (423)
+|.++|.++|+++++.|+++.++|++++++|+ |||+. ++. .|+..+++.+++++.++++..+...+..
T Consensus 48 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~~~~rl~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~ 126 (463)
T 2h5g_A 48 LEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAAPLLKRLSLST-SKLNSLAIGLRQIAASSQDSVGRVLRRT 126 (463)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHHHHHTTCCCH-HHHHHHHHHHHHHHHHCTTSTTCEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCCchhhhhhhhH-HHHHHHHHHHHHHHHhhHhhcCcccccc
Confidence 57899999999999999999999999999999 79987 344 5999999999999987766655442211
Q ss_pred ---CCCceeEeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHc----CCCCCcEEE
Q 014515 70 ---GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNI 142 (423)
Q Consensus 70 ---~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~a----g~P~g~v~~ 142 (423)
.+...++.++|+|||++|+||| |.+.. +++++||++||+||+|||+.+|.++..|.+++.++ | |+|++++
T Consensus 127 ~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~v 203 (463)
T 2h5g_A 127 RIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIASGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQL 203 (463)
T ss_dssp EEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEE
T ss_pred cCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHcCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEE
Confidence 2445688999999999999777 77766 79999999999999999999999999999999999 8 9999999
Q ss_pred EeCCchhHHHHhhcccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCC
Q 014515 143 VSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQ 222 (423)
Q Consensus 143 v~~~~~~~~~~l~~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq 222 (423)
++| +.++++.|+.||+||+|+||||+.+|+.|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.| ||
T Consensus 204 v~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa---l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ 278 (463)
T 2h5g_A 204 VNT-REEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK---GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PA 278 (463)
T ss_dssp CCT-TCCC-------CCCSEEEEESCHHHHHHHHHHCS---SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TT
T ss_pred EcC-CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC---CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CC
Confidence 998 7778999999999999999999999999999876 799999999999999999999999999999999999 99
Q ss_pred cccCCCeEEEeCccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCce
Q 014515 223 CCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYY 302 (423)
Q Consensus 223 ~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~ 302 (423)
.|+++++||||++++| ||+ ++ +++++++++|++++.|+.. ...++|
T Consensus 279 ~C~a~~rvlV~~~i~d-------------------------~p~-----~~---~~i~~~~~~Ga~v~~G~~~-~~~g~~ 324 (463)
T 2h5g_A 279 ACNALETLLIHRDLLR-------------------------TPL-----FD---QIIDMLRVEQVKIHAGPKF-ASYLTF 324 (463)
T ss_dssp STTSEEEEEEEGGGTT-------------------------SHH-----HH---HHHHHHHHTTCEEEECHHH-HC----
T ss_pred ccccCcEEEEeccccc-------------------------hHH-----HH---HHHHHHHhCCCEEEeCCcc-cccCcc
Confidence 9999999999999998 232 23 3577788899999855432 223444
Q ss_pred eecEEEecCCCcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCC
Q 014515 303 IKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD 382 (423)
Q Consensus 303 ~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~ 382 (423)
+ +++|++++||+||||++|++|+|+||||+++|++++||++||||+|.++++++++++++|.|+||++....
T Consensus 325 ~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~ 396 (463)
T 2h5g_A 325 S--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDENTAEFFLQHVDSACVFWNASTRFS 396 (463)
T ss_dssp -------------CCSSCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGC
T ss_pred C--------CCCchHHhccccCceEEEEEeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCccCC
Confidence 2 57899999999999999999999999999999999999999999999999999999999999999987777
Q ss_pred CCCCCCCCCCCCCC--Cc--chHHHHHhhheeeEEEEec
Q 014515 383 AAIPFGGYKQSGQG--RE--KGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 383 ~~~pfgG~~~SG~g--~~--~g~~~l~~~~~~k~v~~~~ 417 (423)
+.+||||+|+||+| ++ +|.+|+++|++.|+|+++.
T Consensus 397 ~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~ 435 (463)
T 2h5g_A 397 DGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGK 435 (463)
T ss_dssp STTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEECS
T ss_pred CCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEECC
Confidence 88999999999999 65 9999999999999998764
No 50
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=5.9e-74 Score=578.08 Aligned_cols=369 Identities=20% Similarity=0.229 Sum_probs=314.0
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCCh----hhhhh-------chHHHHHHHHHHHHHHhhhhcCccCC--
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPF----EQSAQ-------TEVPMTTRLFRYYAGWADKIQGLTAP-- 67 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~----~~~~~-------~ev~~~~~~l~~~~~~~~~~~~~~~~-- 67 (423)
+|.++|.++|+++++.|+++.++|++++++|+||+. .++.. .|+..+++.+++++.+.+.. +...+
T Consensus 45 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~~l~~~a~~~~~~-g~~~~~~ 123 (444)
T 4ghk_A 45 ASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVEGLRQVATLPDPI-GEMSNLK 123 (444)
T ss_dssp CCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHHHHHHHHHSCCCT-TCEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHHHHHHHHhhcccc-CccCCcc
Confidence 578999999999999999999999999999999985 34432 37888999999998876532 32222
Q ss_pred -CCCCCceeEeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHH----HHcCCCCCcEEE
Q 014515 68 -ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLL----HEAGLPPGVLNI 142 (423)
Q Consensus 68 -~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l----~~ag~P~g~v~~ 142 (423)
...+...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++..+.+++ .++|+|+|++++
T Consensus 124 ~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~v 201 (444)
T 4ghk_A 124 YRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTALAKLIGEGLAEAGLPQDTVQV 201 (444)
T ss_dssp ECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEE
T ss_pred cCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHHHHHcCCCcccEEE
Confidence 123456789999999999999998 8 688999999999999999999999999999999997 789999999999
Q ss_pred EeCCch-hHHHHhhcccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccC
Q 014515 143 VSGYGP-TAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 221 (423)
Q Consensus 143 v~~~~~-~~~~~l~~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~G 221 (423)
++|.+. +.++.|..||+||.|+||||+.+|+.|++.+ ++|+++|+|||||+||++|||++.|++.+++++|.|+|
T Consensus 202 v~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a----~~pv~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~G 277 (444)
T 4ghk_A 202 VETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA----RVPMIKHLDGICHVYVDDRASVTKALTVCDNAKTHRYG 277 (444)
T ss_dssp CCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----CSCBCCCCCCCCEEEECTTCCHHHHHHHCC--------
T ss_pred EeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC----CCCEEEEcCCcCeEEECCCCCHHHHHHHHHHHhcCCCc
Confidence 998554 5788888999999999999999999998764 68999999999999999999999999999999999999
Q ss_pred CcccCCCeEEEeCccHHHHHHHHHHHHhhccc---CCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCC
Q 014515 222 QCCCAGSRTFVHESVYDQFVEKANALAMKRVV---GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 298 (423)
Q Consensus 222 q~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~---g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~ 298 (423)
.|+++++||||++++|+|+++|+++++++++ |+|. ..++++++. .
T Consensus 278 -~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~-----------------~~~~i~~a~-~------------- 325 (444)
T 4ghk_A 278 -TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD-----------------ARAVLEAAG-V------------- 325 (444)
T ss_dssp --CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH-----------------HHHHHHHTT-C-------------
T ss_pred -ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH-----------------HHHHHHhcc-c-------------
Confidence 9999999999999999999999999999888 7652 245666542 1
Q ss_pred CCceeecEEEecCCCcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCc
Q 014515 299 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCF 378 (423)
Q Consensus 299 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~ 378 (423)
| ++ +++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||++
T Consensus 326 -G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~ 396 (444)
T 4ghk_A 326 -G------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDRAMRFLREVDSASVMVNAS 396 (444)
T ss_dssp -C------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBHHHHHHHHHHCCSSEEEEEEC
T ss_pred -C------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCcceEEEcCC
Confidence 1 11 24578999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCCCCCCCCCCC----CcchHHHHHhhheeeEEEEec
Q 014515 379 DVFDAAIPFGGYKQSGQG----REKGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 379 ~~~~~~~pfgG~~~SG~g----~~~g~~~l~~~~~~k~v~~~~ 417 (423)
+...+..||||.|+||+| +++|++|+++||+.|+|++..
T Consensus 397 ~~~~~~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~ 439 (444)
T 4ghk_A 397 TRFADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGH 439 (444)
T ss_dssp GGGCSTTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEE
T ss_pred CccCCCCCcCCcccccccCCcccCCChhHHHhhceEEEEEECC
Confidence 777888999999999998 688999999999999998763
No 51
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=7.4e-74 Score=574.61 Aligned_cols=367 Identities=21% Similarity=0.219 Sum_probs=323.3
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCCh----hhhhh-------chHHHHHHHHHHHHHHhhhhcCccCCC-
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPF----EQSAQ-------TEVPMTTRLFRYYAGWADKIQGLTAPA- 68 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~----~~~~~-------~ev~~~~~~l~~~~~~~~~~~~~~~~~- 68 (423)
+|.++|.++|+++++.|+++.++|++++++|+||+. .++.. .|+..+++.+++++.+.+. .+...+.
T Consensus 33 ~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~~~l~~~a~~~~~-~g~~~~~~ 111 (427)
T 1o20_A 33 ATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIKACETVIGLKDP-VGEVIDSW 111 (427)
T ss_dssp CCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHHHHHHHHHSCCC-TTCEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHHHHHHHHHhcccc-cCcccccc
Confidence 578999999999999999999999999999999985 45431 4899999999999987654 3332221
Q ss_pred --CCCCceeEeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHH----HcCCCCCcEEE
Q 014515 69 --DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGLPPGVLNI 142 (423)
Q Consensus 69 --~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~----~ag~P~g~v~~ 142 (423)
..+...+.+++|+|||++|+||| +...++++++||++||+||+|||+.+|.++..|.+++. ++|+|+|++|+
T Consensus 112 ~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~l~~l~~~al~eaGlP~gvv~v 189 (427)
T 1o20_A 112 VREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEF 189 (427)
T ss_dssp ECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHHTTSSSCGGGEEE
T ss_pred ccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHHHHHHHHHHHHHHcCCCcccEEE
Confidence 22445688999999999999876 47889999999999999999999999999999999998 67999999999
Q ss_pred EeCC-chhHHHHhhcccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccC
Q 014515 143 VSGY-GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 221 (423)
Q Consensus 143 v~~~-~~~~~~~l~~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~G 221 (423)
++|. .++.++.|..||+||.|+||||+.+|+.|++.+ ++|+++|+|||||+||++|||++.|++.+++++|.|+|
T Consensus 190 v~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a----~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~f~n~G 265 (427)
T 1o20_A 190 IENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA----TVPVLETGVGNCHIFVDESADLKKAVPVIINAKTQRPG 265 (427)
T ss_dssp CCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----SSCBCCCCCCCEEEEECTTSCHHHHHHHHHHHHHSCTT
T ss_pred ecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc----CCCEEEecCCCceEEEeCCCCHHHHHHHHHHHhccCCC
Confidence 9984 456788999999999999999999999998875 58999999999999999999999999999999999999
Q ss_pred CcccCCCeEEEeCccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCc
Q 014515 222 QCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 301 (423)
Q Consensus 222 q~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~ 301 (423)
.|+++++||||++++|+|+++|++++++++++ +.||... .+
T Consensus 266 -~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~-----------------------------------~~gg~~~--~~- 306 (427)
T 1o20_A 266 -TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE-----------------------------------VRGCEKT--RE- 306 (427)
T ss_dssp -STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE-----------------------------------EEECHHH--HH-
T ss_pred -CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe-----------------------------------eecChhh--hh-
Confidence 99999999999999999999999999887642 1233221 12
Q ss_pred eeecEEEecCCCcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC
Q 014515 302 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF 381 (423)
Q Consensus 302 ~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~ 381 (423)
|+ |||. ++++.+++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||++...
T Consensus 307 ~~-Ptl~---~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~ 382 (427)
T 1o20_A 307 IV-PDVV---PATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRF 382 (427)
T ss_dssp HS-TTSE---ECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGG
T ss_pred hC-Cccc---CCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHHHHHHHhCCccEEEECCCCcc
Confidence 33 8852 4578899999999999999999999999999999999999999999999999999999999999997777
Q ss_pred CCCCCCCCCCCCCCC----CcchHHHHHhhheeeEEEEec
Q 014515 382 DAAIPFGGYKQSGQG----REKGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 382 ~~~~pfgG~~~SG~g----~~~g~~~l~~~~~~k~v~~~~ 417 (423)
.+.+||||.|+||+| +++|++|+++|++.|+|++..
T Consensus 383 ~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~ 422 (427)
T 1o20_A 383 TDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGE 422 (427)
T ss_dssp CSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECS
T ss_pred CCCCCCCCcccccccCCcccCCChHHHHHHhceEEEEECC
Confidence 788999999999997 467999999999999998764
No 52
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=3.1e-72 Score=567.19 Aligned_cols=394 Identities=17% Similarity=0.222 Sum_probs=321.9
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHH-HHHHHHhhhhcCccCCCCCCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLF-RYYAGWADKIQGLTAPADGPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..++...|+..+.+.+ ++++.. +.. ...+.+.+...+..++
T Consensus 26 ~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~~~~~~--~~~-g~~~~~~~~~~~~~~~ 102 (452)
T 3my7_A 26 YSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNKYKDE--QTC-GILEEDDNLGTMTIAE 102 (452)
T ss_dssp CCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHTTC--CCS-EEC-------CEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhhhc--ccc-ccccCCCCCceEEEec
Confidence 578999999999999999999999999999999999998755666666655 333221 111 1122233456788999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHH----HcCCCCCcEEEEeCCchhHHHHhh
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGLPPGVLNIVSGYGPTAGAALA 155 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~----~ag~P~g~v~~v~~~~~~~~~~l~ 155 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++. ++|+|+|+++++++++.+.++.|+
T Consensus 103 P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~a~~~aG~P~gvv~~v~g~~~~~~~~L~ 182 (452)
T 3my7_A 103 PVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVELSNALM 182 (452)
T ss_dssp ECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEEECSSCCHHHHHHHH
T ss_pred CceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHHHHHHcCCCcCcEEEEcCCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998888775 789999999999998888999999
Q ss_pred cccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCc
Q 014515 156 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 235 (423)
Q Consensus 156 ~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~ 235 (423)
.||+|+.|+||||+.+++ .++. ++||+++|+|||+|+||++|||++.|++.+++++|+|+||.|+++++||||++
T Consensus 183 ~~p~v~~V~fTGs~~~~~----~a~~-~~kp~~~e~gG~~p~iV~~dADl~~Aa~~iv~s~~~~~GQ~C~a~~rv~V~~~ 257 (452)
T 3my7_A 183 KHDDIALILATGGPGMVK----AAYS-SGKPAIGVGAGNVPVVIDETADIKRAVASVLMSKTFDNGVVCASEQAVIVVDE 257 (452)
T ss_dssp HCTTCCEEEECSCHHHHH----HHHT-SSSCEEECC--CEEEEECTTSCHHHHHHHHHHGGGGGGGCCTTCEEEEEEEGG
T ss_pred hCCCccEEEEECcHHHHH----HHHh-cCCCEEecCCCCCeEEEeCCCCHHHHHHHHHHHHhCCCCCccCCCcEEEEcHH
Confidence 999999999999998654 3444 78999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccc---CCCCceeecEE-----
Q 014515 236 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL---GAKGYYIKPTV----- 307 (423)
Q Consensus 236 ~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~---~~~g~~~~Ptv----- 307 (423)
+||+|+++|+++ +||++++++++++.++++++...|+++ +||... +..|+|++||+
T Consensus 258 i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~v-~G~~~~~~~~~~G~~v~pt~~vl~~ 321 (452)
T 3my7_A 258 VYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNAKI-VGQPATAIAEMAGVKVPADTKVLIG 321 (452)
T ss_dssp GHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECGGG-TTCCHHHHHHHHTCCCCTTCCEEEE
T ss_pred HHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCCeE-ecCccchhHHhCCceeCCCeeEEee
Confidence 999999999873 499999999999999998766667776 476532 13589999997
Q ss_pred --EecCCCcccccccccccCeeEEEecCCHHHHHHHHhcCC----CCceEEEecCCHHHHHH---HHHhcceeEEEEcCc
Q 014515 308 --FTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQ----YGLAAGVFTHNLDTANT---LMRALRVGSVWINCF 378 (423)
Q Consensus 308 --l~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~----~gl~~~v~s~d~~~~~~---~~~~l~~g~v~iN~~ 378 (423)
+.++++++++.+ |+||||++|++|+|+||||+++|++. |||+++|||+|.+++++ +++++++|+|+||++
T Consensus 322 ~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~t~d~~~a~~i~~~a~~l~~G~V~VN~~ 400 (452)
T 3my7_A 322 EGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTARILINIP 400 (452)
T ss_dssp ECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEESCTTTCHHHHHHHHHHCCCSEEEESCC
T ss_pred ccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEEcCCHHHHHHHHHHHHhCCEEEEEECCC
Confidence 667888888775 89999999999999999999999975 99999999999887777 999999999999986
Q ss_pred CCCC-----------CCCCCCCCCCCCCCCcchHHHHHhhheeeEEEEecCCC
Q 014515 379 DVFD-----------AAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNP 420 (423)
Q Consensus 379 ~~~~-----------~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~v~~~~~~~ 420 (423)
+.+. +.+++ |++..|.+...+..+.++|.+.|+|..+.+|+
T Consensus 401 ~~~Gg~G~~~~f~~~~~~t~-g~g~~Gg~~~~~nv~~~~l~n~~~v~~~~~~~ 452 (452)
T 3my7_A 401 TTHGGIGDLYNFNVAPSLTL-GCGSWGGNSISENVGPKHLINKKTVAKRAENM 452 (452)
T ss_dssp CC-----------------------------CCCCCGGGGEEEEEEECCC---
T ss_pred CCCcccccccccCcCceEee-eccccCCCccCCCCChhHeeeeeEEEeecCCC
Confidence 5431 12233 45566666677778999999999998887763
No 53
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=97.61 E-value=0.053 Score=52.46 Aligned_cols=265 Identities=16% Similarity=0.146 Sum_probs=147.1
Q ss_pred CCCCceeEeeccceeEEEEccC---chhHHhHHHhhhhhhccCCeEE--EeCCCCchHHHHHHHHHHHHcCCCCCcEEEE
Q 014515 69 DGPYHVQTLHEPIGVAGQIIPW---NFPLLMFAWKVGPALACGNTIV--LKTAEQTPLSALYVSKLLHEAGLPPGVLNIV 143 (423)
Q Consensus 69 ~~~~~~~~~~~P~Gvv~~i~p~---n~P~~~~~~~l~~AL~aGN~vi--~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v 143 (423)
..|.....++.|+--|++..|. .||-.. +...+||-.+|+.=| ..|++. -.....+.-+.+.+|+.+ +.
T Consensus 118 ~~G~~~g~~~~Pi~~VGlYVPGG~A~ypSsv-LM~aiPAkVAGV~~Iv~~tPp~~-G~i~p~iL~AA~l~Gv~e----Iy 191 (423)
T 4gic_A 118 ADGTLLGQKITPLDRVGLYVPGGKAAYPSSV-LMNAVPAKVAGVPELIMAVPAPR-GELNALVLAAAYISGVDR----VF 191 (423)
T ss_dssp TTSCEEEEEEEECSEEEEECCCSTTCCHHHH-HHHHHHHHHHTCSEEEEECCCGG-GCCCHHHHHHHHHHTCCE----EE
T ss_pred CCCCEEEEEEEEecceeEEeeCCCCchhhHH-HHhhccHHHhCCCeEEEecCCCC-CCccHHHHHHHHhcCCcE----EE
Confidence 3466677889999999999995 466544 445789999999733 344332 112223333445556542 33
Q ss_pred eCCchhHHHHhhc----ccCcceEeeecCchHHHHHHHHHhhCCCCceEEec-CCcce--EEEcCCCCHHHHHHHHHHHH
Q 014515 144 SGYGPTAGAALAS----HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLEL-GGKSP--FIVCEDADVDKAAELAHYAL 216 (423)
Q Consensus 144 ~~~~~~~~~~l~~----~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~-gg~~~--~iv~~~ad~~~aa~~iv~~~ 216 (423)
.-.|...-.+|.. -|.||.|+=.|+.-+..+=.... + .|-..+ -|.+= +|-++++|.+..+..++.-+
T Consensus 192 ~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~---g--~VgIDm~AGPSEilViAD~~a~p~~vAaDLlsQA 266 (423)
T 4gic_A 192 RIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVF---G--QVGIDMVAGPSEILVISDGRTDPDWIAMDLFSQA 266 (423)
T ss_dssp CCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHB---T--TBEECCCCCCCEEEEEECSCSCHHHHHHHHHHHH
T ss_pred EcCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhc---C--CcCcccccccceEEEEeCCCCCHHHHHHHHHHhh
Confidence 2224333344443 47899999999876543222211 1 122222 23332 34445689998888777655
Q ss_pred HhccCCcccCCCeEEEeCccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccc
Q 014515 217 FFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 296 (423)
Q Consensus 217 ~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~ 296 (423)
=+.. ..+.++|..+ ++|.+++.+.+.++--. +.. .+.+.+.++
T Consensus 267 EHd~-----~a~~iLvT~s--~~la~~V~~~i~~~l~~-----------l~r---~~i~~~sl~---------------- 309 (423)
T 4gic_A 267 EHDE-----DAQAILISPD--AAHLEAVQASIERLLPG-----------MER---AEVIRTSLE---------------- 309 (423)
T ss_dssp TTCT-----TCEEEEEESC--HHHHHHHHHHHHHHGGG-----------CTT---HHHHHHHHH----------------
T ss_pred ccCC-----CCeEEEEeCc--HHHHHHHHHHHHHHHhh-----------Ccc---HHHHHHHHh----------------
Confidence 4442 2345677666 44555554444331100 000 111111111
Q ss_pred CCCCceeecEEEecCCCcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcc-eeEEEE
Q 014515 297 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALR-VGSVWI 375 (423)
Q Consensus 297 ~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~-~g~v~i 375 (423)
-+| .++.++|++|+++++|..- +-..-|.++|+. .+..+++ +|.|++
T Consensus 310 -------------------------~~g---~ii~v~~~~ea~~~~N~~A-PEHLel~~~~~~---~~l~~i~nAGaIFl 357 (423)
T 4gic_A 310 -------------------------RRG---GMILVDDLEQAAAVANRIA-PEHLELSVESPE---VLVESIRNAGAIFM 357 (423)
T ss_dssp -------------------------HHC---EEEECSSHHHHHHHHHHHC-CSEEEEESSCHH---HHGGGCCCCSEEEE
T ss_pred -------------------------cCc---eEEEEeehHHHHHHHHhhC-hHHhhhhhCCHH---HHHhhCcEeceeec
Confidence 011 3446799999999999854 346778899975 5777775 999999
Q ss_pred cCcCCC--CCC--CCCCCCCCCCCCCcchHHHHHhhheeeEE
Q 014515 376 NCFDVF--DAA--IPFGGYKQSGQGREKGSYSLSNYLQVKAV 413 (423)
Q Consensus 376 N~~~~~--~~~--~pfgG~~~SG~g~~~g~~~l~~~~~~k~v 413 (423)
..+... ..+ .|-.=..-+|..|+.+..+++.|....++
T Consensus 358 G~~tp~~~GDY~aG~NHvLPT~G~Ar~~sgLsv~~F~K~~s~ 399 (423)
T 4gic_A 358 GRYTAEALGDYCAGPNHVLPTSGTARFSSPLGVYDFQKRSSL 399 (423)
T ss_dssp C----------------CCCCTTGGGTCCCCCGGGGEEEEEE
T ss_pred CCCCchhhhhcCcCCCccCCCCCcccccCCCCHHHeeeeeeE
Confidence 865321 111 11112345677777777788888886554
No 54
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=97.07 E-value=0.063 Score=52.05 Aligned_cols=262 Identities=18% Similarity=0.150 Sum_probs=146.9
Q ss_pred CCceeEeeccceeEEEEccC---chhHHhHHHhhhhhhccCCeEEE--eCCCCchHHHHHHHHHHHHcCCCCCcEEEEeC
Q 014515 71 PYHVQTLHEPIGVAGQIIPW---NFPLLMFAWKVGPALACGNTIVL--KTAEQTPLSALYVSKLLHEAGLPPGVLNIVSG 145 (423)
Q Consensus 71 ~~~~~~~~~P~Gvv~~i~p~---n~P~~~~~~~l~~AL~aGN~vi~--kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~ 145 (423)
|.....++.|+--|++..|. -||-. .+...+||-.+|+.=|+ .|+.-.| .+.-+.+.+|..+ |--+ |
T Consensus 114 Gv~~gq~~~Pi~rvGlYVPGG~a~ypSs-vLM~aiPAkVAGV~~Iv~~tPp~i~p----~iL~AA~l~Gv~e--Iy~v-G 185 (434)
T 1kae_A 114 GVRCQQVTRPVASVGLYIPGGSAPLFST-VLMLATPASIAGCKKVVLCSPPPIAD----EILYAAQLCGVQD--VFNV-G 185 (434)
T ss_dssp TEEEEEEEEECSEEEEECCCSSSCCTHH-HHHHHHHHHHHTCSEEEEEECSSCCH----HHHHHHHHTTCCE--EEEC-C
T ss_pred CcEEEEEEeehheEEEEecCCCCCchhH-HHHhhccHhhcCCCeEEEECCCCCCH----HHHHHHHHcCCCE--Eeec-c
Confidence 55667788999999999996 46644 44457899999987655 3432222 2333345555542 2222 2
Q ss_pred CchhHHHHhhc----ccCcceEeeecCchHHHHHHHHHhhCCCCceEEec-CCcce--EEEcCCCCHHHHHHHHHHHHHh
Q 014515 146 YGPTAGAALAS----HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLEL-GGKSP--FIVCEDADVDKAAELAHYALFF 218 (423)
Q Consensus 146 ~~~~~~~~l~~----~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~-gg~~~--~iv~~~ad~~~aa~~iv~~~~~ 218 (423)
|...-.+|.. -|+||.|+=.|..-+..+=.. ..... ..|-..+ -|.+= +|-++++|.+..+..++.-+=+
T Consensus 186 -GAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~-Vs~~~-G~VgIDm~AGPSEilViAD~tAnp~~vAaDLLsQAEH 262 (434)
T 1kae_A 186 -GAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQ-VSQRL-DGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAEH 262 (434)
T ss_dssp -HHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHH-HHHCT-TSCEESCCCCCCEEEEEECTTSCHHHHHHHHHHHHTT
T ss_pred -cHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHH-hHhhc-CccccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhcc
Confidence 3333333432 378999998888754332111 11101 1222222 23333 3445568999888877765544
Q ss_pred ccCCcccCCCeEEEeCccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCC
Q 014515 219 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 298 (423)
Q Consensus 219 ~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~ 298 (423)
.. ..+.++|-.+ +++.+++.+++.++--. +.. . +.++.+
T Consensus 263 d~-----~a~aiLvT~s--~~la~~V~~ev~~ql~~-----------lpr---~----~ia~~s---------------- 301 (434)
T 1kae_A 263 GP-----DSQVILLTPA--ADMARRVAEAVERQLAE-----------LPR---A----ETARQA---------------- 301 (434)
T ss_dssp CT-----TCEEEEEESC--HHHHHHHHHHHHHHHTT-----------CTT---H----HHHHHH----------------
T ss_pred CC-----CCcEEEEECC--HHHHHHHHHHHHHHHHh-----------CCh---H----HHHHHH----------------
Confidence 32 2345666655 44444444444321000 000 0 111111
Q ss_pred CCceeecEEEecCCCcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhc-ceeEEEEcC
Q 014515 299 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVWINC 377 (423)
Q Consensus 299 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l-~~g~v~iN~ 377 (423)
+..- .++.++|++||++++|..-. -..-|.++|+. .++.++ ++|.|++..
T Consensus 302 ------------------------l~~~-~ii~v~~l~ea~~~~N~~AP-EHLel~~~dp~---~~l~~I~nAGaIFlG~ 352 (434)
T 1kae_A 302 ------------------------LNAS-RLIVTKDLAQCVEISNQYGP-EHLIIQTRNAR---ELVDSITSAGSVFLGD 352 (434)
T ss_dssp ------------------------HTTC-EEEECSSHHHHHHHHHHHCC-SEEEEESTTHH---HHGGGCCSCSEEEEST
T ss_pred ------------------------HHcC-eEEEECCHHHHHHHHHHhhh-HhhhhhhcCHH---HHHhhcCcccchhcCC
Confidence 1122 45678999999999998643 36788999985 666777 599999997
Q ss_pred cCCC---C-CCCCCCCCCCCCCCCcchHHHHHhhheeeEE
Q 014515 378 FDVF---D-AAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 413 (423)
Q Consensus 378 ~~~~---~-~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~v 413 (423)
+... + ...|-.=..-+|..|+.+..+++.|...-++
T Consensus 353 ~tpe~~GDY~aG~NHvLPT~G~AR~~sgLsV~~F~K~~s~ 392 (434)
T 1kae_A 353 WSPESAGDYASGTNHVLPTYGYTATCSSLGLADFQKRMTV 392 (434)
T ss_dssp TCCHHHHHHTSSSCCCCCCTTGGGTCCCSCGGGGEEEEEE
T ss_pred CCchhhcccccCCCcccCCCCceeccCCCcHHhccceeeE
Confidence 6431 1 0111111334566777777788888886554
No 55
>2fiu_A Conserved hypothetical protein; alpha-beta, dimeric alpha-beta barrels, structural genomics, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.58.4.16
Probab=73.60 E-value=7.1 Score=29.64 Aligned_cols=60 Identities=18% Similarity=0.360 Sum_probs=36.2
Q ss_pred CHHHHHHHHHHHHHHH-hCCCEEEeCCcccCCCCceeecEEEecCCCcccccccccccCeeEEEecCCHHHHHHHHhcCC
Q 014515 268 DSEQFEKILKYIRSGV-DGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQ 346 (423)
Q Consensus 268 ~~~~~~~~~~~i~~a~-~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~ 346 (423)
+++.+++..+.....+ +-|++++..|.. |.++.... .+-+.|+.|+|.+.|.++.|+..
T Consensus 16 d~e~y~~Y~~~~~~~~~~~gGr~l~~g~~---------~~~~eG~~-----------~~~~viieFpS~~aa~~~~~s~~ 75 (99)
T 2fiu_A 16 DSERYKDYVSTAKPAFERFGANFLARGGS---------VTELEGTA-----------RARNVVIEFPSVQHAIDCYNSPE 75 (99)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEESCC---------EEEEESCC-----------CSEEEEEEESSHHHHHHHHHSHH
T ss_pred CHHHHHHHHHHHHHHHHHcCcEEEEECCC---------ceEEecCC-----------cCeEEEEECCCHHHHHHHHcCHH
Confidence 3334444444443333 347888876652 34444311 23678999999999999998654
Q ss_pred C
Q 014515 347 Y 347 (423)
Q Consensus 347 ~ 347 (423)
|
T Consensus 76 Y 76 (99)
T 2fiu_A 76 Y 76 (99)
T ss_dssp H
T ss_pred H
Confidence 3
No 56
>3v4g_A Arginine repressor; vibrio vulnificus CMCP6, virulence, type secretion system, center for structural genomics of infecti diseases, csgid; 1.60A {Vibrio vulnificus} PDB: 1aoy_A
Probab=66.23 E-value=18 Score=30.61 Aligned_cols=42 Identities=21% Similarity=0.332 Sum_probs=33.2
Q ss_pred hhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 014515 102 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY 146 (423)
Q Consensus 102 ~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~ 146 (423)
...-.++|-+|+|..|-. +..++.++...++|++++-.+.|+
T Consensus 111 vsv~~~~nlvVIkT~PG~---A~~vA~~ID~~~~~e~IlGTIAGD 152 (180)
T 3v4g_A 111 LDVDHNQALVVIHTGPGA---AQLIARMLDSLGKSEGILGVVAGD 152 (180)
T ss_dssp EEEEECSSCEEEEESTTC---HHHHHHHHHHHCGGGTEEEEEECS
T ss_pred EEEeecCCEEEEEeCCCc---HHHHHHHHHhCCCCCCeEEEEecC
Confidence 334457999999987654 677888888888999899999874
No 57
>3v42_A Folliculin; tumor suppressor, protein binding; 2.00A {Homo sapiens}
Probab=60.94 E-value=7.5 Score=34.35 Aligned_cols=66 Identities=14% Similarity=0.147 Sum_probs=45.9
Q ss_pred HHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCcceEeeecCchH
Q 014515 98 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTT 171 (423)
Q Consensus 98 ~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~~~ 171 (423)
+..++..+.+||.||++.+. +.....+..+|... +|.+.+.+++.+ ++- ...-..+.+.++.+...
T Consensus 21 F~~l~~~vl~GnQiIVrg~~--~~~~~s~~~~L~~l-LP~~c~~l~~~s-~~Y----~~~~~cnilgls~~v~i 86 (226)
T 3v42_A 21 FRMLAWHVLMGNQVIWKSRD--VDLVQSAFEVLRTM-LPVGCVRIIPYS-SQY----EEAYRCNFLGLSPHVQI 86 (226)
T ss_dssp HHHHHHHHHHTCEEEEECSC--HHHHHHHHHHHGGG-SCGGGCCEEEEE-SSC----CCTTTCSEEEECTTCCC
T ss_pred HHHHHHHHhcCCEEEEEcCC--HHHHHHHHHHHHHh-CCHHHHhccccc-hhh----cchhheeeecCCCCccc
Confidence 45567788899999999876 55666677778887 999999998642 211 12234667766666543
No 58
>1s7i_A Hypothetical protein PA1349; structural genomics, protein structure initiative, pseudomon aeruginosa, MCSG, PSI; 1.80A {Pseudomonas aeruginosa} SCOP: d.58.4.9
Probab=58.94 E-value=31 Score=27.22 Aligned_cols=72 Identities=13% Similarity=0.149 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHhCCCEEEeCCcc-cCCCCceee-----cEEEecCCCcccccccccccCeeEEEecCCHHHHHHHHhc
Q 014515 271 QFEKILKYIRSGVDGGAKLETGGER-LGAKGYYIK-----PTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNA 344 (423)
Q Consensus 271 ~~~~~~~~i~~a~~~ga~~~~gg~~-~~~~g~~~~-----Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~ 344 (423)
..+...++.++..+.|. ++.|+.. +...+..+. |+|.+.+-.+ ..|..|= +.|+.++|.|||++++.+
T Consensus 31 ~~~~~~~~~~~l~~~G~-lv~g~~L~~~~~a~~Vr~~~g~~~VtdGPfaE----tkE~lgG-~~iie~~s~deA~e~A~~ 104 (124)
T 1s7i_A 31 IVDECMTYSDQLGKAGH-YIASHALQSVQTATTLRHQGGRLAMTDGPFAE----TKEQLGG-FYLIEARDLNQALQIAAK 104 (124)
T ss_dssp HHHHHHHHHHHHHHHTC-EEEEEECCCGGGCEEEEECSSCEEEEESCSSC----CSSEEEE-EEEEEESSHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHCCE-EEecCcCCCCcceEEEEecCCceeEecCCCcC----Cccccee-EEEEEeCCHHHHHHHHHh
Confidence 34555566666656664 3333221 111222222 3444443333 2355553 567799999999999988
Q ss_pred CCCC
Q 014515 345 SQYG 348 (423)
Q Consensus 345 ~~~g 348 (423)
.++.
T Consensus 105 ~P~~ 108 (124)
T 1s7i_A 105 IPPG 108 (124)
T ss_dssp CGGG
T ss_pred CCcc
Confidence 7754
No 59
>3lo3_A Uncharacterized conserved protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.38A {Colwellia psychrerythraea} SCOP: d.58.4.0
Probab=57.95 E-value=25 Score=26.16 Aligned_cols=60 Identities=15% Similarity=0.230 Sum_probs=37.5
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEeCCcccCCCCceeecEEEecCCCcccccccccccCeeEEEecCCHHHHHHHHhcCC
Q 014515 268 DSEQFEKILKYIRSGVDG-GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQ 346 (423)
Q Consensus 268 ~~~~~~~~~~~i~~a~~~-ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~ 346 (423)
+++.+++..+....++++ |++++..| . +.++.+.. -...+.|+.|+|.+.|.++.|+..
T Consensus 15 d~e~y~~Y~~~~~~~l~~~GG~~l~rg-~---------~~~lEG~~----------~~~~~viieFps~~aa~a~y~Spe 74 (94)
T 3lo3_A 15 DAEKLQQYGARVASTLAKYSGEVLVKG-S---------VEQLHGKF----------EHKAQVILEFPSREDAYNWYHSEE 74 (94)
T ss_dssp CHHHHHHHHHHHHHHHHTTTCEEEEEE-E---------CEEEESCC----------CCSEEEEEEESSHHHHHHHHHSHH
T ss_pred CHHHHHHHHHHHHHHHHHcCCEEEEEc-c---------cccccCCC----------CCCeEEEEECCCHHHHHHHHCCHH
Confidence 444555555555555544 77877665 3 22343210 124788999999999999998754
Q ss_pred C
Q 014515 347 Y 347 (423)
Q Consensus 347 ~ 347 (423)
|
T Consensus 75 Y 75 (94)
T 3lo3_A 75 Y 75 (94)
T ss_dssp H
T ss_pred H
Confidence 4
No 60
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=51.46 E-value=78 Score=24.12 Aligned_cols=140 Identities=18% Similarity=0.181 Sum_probs=89.4
Q ss_pred eEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHHHH
Q 014515 162 KLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 241 (423)
Q Consensus 162 ~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~f~ 241 (423)
.|+|...+..-+.|.+.... .|...+++..|.|-..--+.+ .-|...|-. .-- .++ .+.|.
T Consensus 5 fvvfssdpeilkeivreikr----------qgvrvvllysdqdekrrrerl--eefekqgvd-----vrt-ved-kedfr 65 (162)
T 2l82_A 5 FVVFSSDPEILKEIVREIKR----------QGVRVVLLYSDQDEKRRRERL--EEFEKQGVD-----VRT-VED-KEDFR 65 (162)
T ss_dssp EEEEESCHHHHHHHHHHHHH----------TTCEEEEEECCSCHHHHHHHH--HHHHTTTCE-----EEE-CCS-HHHHH
T ss_pred EEEecCCHHHHHHHHHHHHh----------CCeEEEEEecCchHHHHHHHH--HHHHHcCCc-----eee-ecc-HHHHH
Confidence 46777777777777776655 345556677777766554443 235566622 112 222 68999
Q ss_pred HHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCcc--cccc
Q 014515 242 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDM--LIAK 319 (423)
Q Consensus 242 ~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~--~~~~ 319 (423)
+.+++....++. .++--+++.+..+.++++|++|+..|.++. ++.+...++ .-.+
T Consensus 66 enireiwerypq-------ldvvvivttddkewikdfieeakergvevf----------------vvynnkdddrrkeaq 122 (162)
T 2l82_A 66 ENIREIWERYPQ-------LDVVVIVTTDDKEWIKDFIEEAKERGVEVF----------------VVYNNKDDDRRKEAQ 122 (162)
T ss_dssp HHHHHHHHHCTT-------CCEEEEEECCCHHHHHHHHHHHHHTTCEEE----------------EEEECSCHHHHHHHH
T ss_pred HHHHHHHHhCCC-------CcEEEEEecCcHHHHHHHHHHHHhcCcEEE----------------EEecCCCchhHHHHH
Confidence 999998877532 233445556667999999999999998775 233322222 1234
Q ss_pred cccccCeeEEEecCCHHHHHHHHh
Q 014515 320 DEIFGPVQSILKYKDLDEVIQRSN 343 (423)
Q Consensus 320 ~E~fgPvl~v~~~~~~~eai~~~n 343 (423)
+|.-+-=+-+..+++-+|.|+.+.
T Consensus 123 qefrsdgvdvrtvsdkeelieqvr 146 (162)
T 2l82_A 123 QEFRSDGVDVRTVSDKEELIEQVR 146 (162)
T ss_dssp HHHCCSSCEEEEESSHHHHHHHHH
T ss_pred HHhhhcCceeeecCCHHHHHHHHH
Confidence 566666677888888888876553
No 61
>1b4a_A Arginine repressor; helix turn helix; 2.50A {Geobacillus stearothermophilus} SCOP: a.4.5.3 d.74.2.1 PDB: 1f9n_A
Probab=50.34 E-value=53 Score=26.79 Aligned_cols=39 Identities=23% Similarity=0.302 Sum_probs=30.2
Q ss_pred hhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 014515 104 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY 146 (423)
Q Consensus 104 AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~ 146 (423)
.=.++|-+|+|..|-. +..++.++...++|+ ++-.+.|+
T Consensus 87 v~~~~n~vVikT~PG~---A~~va~~iD~~~~~e-IlGTIAGD 125 (149)
T 1b4a_A 87 LDGTGNLLVLRTLPGN---AHAIGVLLDNLDWDE-IVGTICGD 125 (149)
T ss_dssp EEEETTEEEEEESTTC---HHHHHHHHHHHTCTT-EEEEEECS
T ss_pred EeecCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecC
Confidence 3347999999987644 677888888887775 88888774
No 62
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=47.76 E-value=18 Score=23.02 Aligned_cols=29 Identities=10% Similarity=0.122 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHcHHHHHHHHHHHcC
Q 014515 5 ERSKIILRFADLLERHNDEIAALETWDNG 33 (423)
Q Consensus 5 ~R~~~L~~la~~l~~~~~~l~~~~~~e~G 33 (423)
...++|..+...|++.++++++++..|..
T Consensus 12 ~KqEIL~E~RkElqK~K~EIIeAi~~El~ 40 (45)
T 1use_A 12 VKQELLEEVKKELQKVKEEIIEAFVQELR 40 (45)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45788899999999999999998876643
No 63
>3hhl_A RPA0582; alpha-beta-barrel, structural genomics, PSI-2, protein struc initiative, reductive methylation; HET: MLY MLZ PGE 2PE PE8 1PE PG4; 2.65A {Rhodopseudomonas palustris} PDB: 3hhl_B* 3hhl_C* 3dca_A
Probab=45.55 E-value=61 Score=26.20 Aligned_cols=65 Identities=12% Similarity=0.110 Sum_probs=42.3
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEeCCcccCCCCceeecEEEecCCCcccccccccccCeeEEEecCCHHHHHHHHh
Q 014515 265 PQIDSEQFEKILKYIRSGVDG-GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSN 343 (423)
Q Consensus 265 p~~~~~~~~~~~~~i~~a~~~-ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n 343 (423)
.+.+++.+++..+....++++ |++++..|.. +.++..... |. -..+.|+.|+|.+.|.++.+
T Consensus 44 ~vtd~e~y~~Y~~~~~~~l~~~GG~~l~rG~~---------~~~lEG~~~-------e~-~~~~viieFPS~~aa~a~y~ 106 (143)
T 3hhl_A 44 ETTGAEAYAAYGRDSGPVSERLGGXVVWQGQF---------ELMLIGPQD-------EH-WDHVFIAEYPSVAAFVEMIR 106 (143)
T ss_dssp CCBHHHHHHHHHHHHHHHHHHTTCEEEEEEEE---------EEEEESCTT-------CC-CSEEEEEEESCHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHHHHHcCCEEEeecCC---------ceeEECCCC-------CC-CCeEEEEECCCHHHHHHHHc
Confidence 456667777766666655544 8888876653 234443221 11 14688999999999999987
Q ss_pred cCC
Q 014515 344 ASQ 346 (423)
Q Consensus 344 ~~~ 346 (423)
+-.
T Consensus 107 Spe 109 (143)
T 3hhl_A 107 DPV 109 (143)
T ss_dssp CHH
T ss_pred CHH
Confidence 653
No 64
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=42.22 E-value=23 Score=29.50 Aligned_cols=51 Identities=20% Similarity=0.296 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcc--cCcceEeeecCchHHH
Q 014515 122 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH--MEVDKLAFTGSTTTGK 173 (423)
Q Consensus 122 ~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~--~~v~~v~~tGs~~~~~ 173 (423)
....|.+++++.|+..-...+++.+ +.+.++|.+. .+.|.|+.||+...+.
T Consensus 28 n~~~l~~~l~~~G~~v~~~~iv~Dd-~~i~~al~~a~~~~~DlVittGG~s~g~ 80 (164)
T 3pzy_A 28 CGPIITEWLAQQGFSSAQPEVVADG-SPVGEALRKAIDDDVDVILTSGGTGIAP 80 (164)
T ss_dssp HHHHHHHHHHHTTCEECCCEEECSS-HHHHHHHHHHHHTTCSEEEEESCCSSST
T ss_pred HHHHHHHHHHHCCCEEEEEEEeCCH-HHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 4567788888888876667788776 6676666543 3689999999986543
No 65
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=42.05 E-value=18 Score=30.17 Aligned_cols=52 Identities=25% Similarity=0.230 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcc---cCcceEeeecCchHH
Q 014515 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH---MEVDKLAFTGSTTTG 172 (423)
Q Consensus 121 ~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~---~~v~~v~~tGs~~~~ 172 (423)
.....|.+.+.+.|+......+++.+.+.+.++|.+. .+.|.|+.||+...+
T Consensus 31 sn~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g 85 (169)
T 1y5e_A 31 KSGQLLHELLKEAGHKVTSYEIVKDDKESIQQAVLAGYHKEDVDVVLTNGGTGIT 85 (169)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEEECSSHHHHHHHHHHHHTCTTCSEEEEECCCSSS
T ss_pred ChHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCC
Confidence 4556788888888886555666765445555555432 268999999998644
No 66
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=40.88 E-value=13 Score=29.99 Aligned_cols=88 Identities=14% Similarity=0.094 Sum_probs=54.5
Q ss_pred hHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEe-CCchhHHHHhhcccCcceEeeecC---
Q 014515 93 PLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVS-GYGPTAGAALASHMEVDKLAFTGS--- 168 (423)
Q Consensus 93 P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~-~~~~~~~~~l~~~~~v~~v~~tGs--- 168 (423)
+-...+.+-...++.|..++- +.-|+..|.+. .|+|...++=++ +.++.+.+.+.+ -.++.|+||=+
T Consensus 16 ~~~v~~a~~~~~ll~Gf~l~A-----T~gTa~~L~e~---~Gl~v~~v~k~~~eG~p~I~d~I~~-geIdlVInt~~pl~ 86 (134)
T 2xw6_A 16 EEMVAFCQRHREVLARFPLVA-----TGTTGRRIEEA---TGLTVEKLLSGPLGGDQQMGARVAE-GRILAVIFFRDPLT 86 (134)
T ss_dssp HHHHHHHHHTHHHHTTSCEEE-----CHHHHHHHHHH---HCCCCEECSCGGGTHHHHHHHHHHT-TCEEEEEEECCTTT
T ss_pred HHHHHHHHHHHHHhCCCEEEE-----ccHHHHHHHHh---hCceEEEEEecCCCCcchHHHHHHC-CCccEEEEccCccc
Confidence 334444445556667777664 24454444431 699977666555 435567776665 58999999877
Q ss_pred ----chHHHHHHHHHhhCCCCceEEe
Q 014515 169 ----TTTGKIVLQLAAKSNLKPVTLE 190 (423)
Q Consensus 169 ----~~~~~~v~~~~a~~~~~~~~~e 190 (423)
...+..|.+.+.. ...|+...
T Consensus 87 ~~~h~~D~~~IrR~A~~-~~IP~~T~ 111 (134)
T 2xw6_A 87 AQPHEPDVQALLRVCDV-HGVPLATN 111 (134)
T ss_dssp CCTTSCCSHHHHHHHHH-HTCCEECS
T ss_pred CCCccchHHHHHHHHHH-cCCCeEcC
Confidence 3455778887776 44565544
No 67
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=40.53 E-value=33 Score=28.19 Aligned_cols=114 Identities=17% Similarity=0.114 Sum_probs=72.8
Q ss_pred eeEEEEccCc-hhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHH-cCCCCCcEEEEeC-CchhHHHHhhccc
Q 014515 82 GVAGQIIPWN-FPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHE-AGLPPGVLNIVSG-YGPTAGAALASHM 158 (423)
Q Consensus 82 Gvv~~i~p~n-~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~-ag~P~g~v~~v~~-~~~~~~~~l~~~~ 158 (423)
|.|+++...+ =+-...+.+-...++.|..++--. -|+. .|++ .|+|...++=++. .++.+++.+.+ -
T Consensus 12 g~V~lsv~D~dK~~~v~~ak~~~~ll~Gf~l~AT~-----gTa~----~L~e~~Gl~v~~v~k~~eGG~p~I~d~I~~-g 81 (152)
T 1b93_A 12 KHIALVAHDHCKQMLMSWVERHQPLLEQHVLYATG-----TTGN----LISRATGMNVNAMLSGPMGGDQQVGALISE-G 81 (152)
T ss_dssp CEEEEEECGGGHHHHHHHHHHTHHHHTTSEEEEET-----THHH----HHHHHHCCCCEEECCGGGTHHHHHHHHHHT-T
T ss_pred CEEEEEEehhhHHHHHHHHHHHHHHhCCCEEEEcc-----HHHH----HHHHHhCceeEEEEecCCCCCchHHHHHHC-C
Confidence 7666555544 345555556667777899887643 3444 4444 7999766654442 24456666665 5
Q ss_pred CcceEeeecC-------chHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccC
Q 014515 159 EVDKLAFTGS-------TTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 221 (423)
Q Consensus 159 ~v~~v~~tGs-------~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~G 221 (423)
.||.|+||=+ ...+..|.+.+.. ...|+...+ ..|+.++.+.+++..
T Consensus 82 eIdlVInt~~pl~~~~h~~D~~~IrR~A~~-~~IP~~T~l---------------atA~a~v~ai~~~~~ 135 (152)
T 1b93_A 82 KIDVLIFFWDPLNAVPHDPDVKALLRLATV-WNIPVATNV---------------ATADFIIQSPHFNDA 135 (152)
T ss_dssp CCCEEEEECCTTSCCTTHHHHHHHHHHHHH-TTCCEESSH---------------HHHHHHHTSGGGGSC
T ss_pred CccEEEEcCCcccCCcccccHHHHHHHHHH-cCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 8999999876 3466778888877 556665543 356677777776654
No 68
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=39.96 E-value=38 Score=27.34 Aligned_cols=63 Identities=11% Similarity=0.102 Sum_probs=43.3
Q ss_pred HHHHHHcCCCCCcEEEEeCC-c----hhHHHHhhcccCcceEeeecCc-----hHHHHHHHHHhhCCCCceEEec
Q 014515 127 SKLLHEAGLPPGVLNIVSGY-G----PTAGAALASHMEVDKLAFTGST-----TTGKIVLQLAAKSNLKPVTLEL 191 (423)
Q Consensus 127 ~~~l~~ag~P~g~v~~v~~~-~----~~~~~~l~~~~~v~~v~~tGs~-----~~~~~v~~~~a~~~~~~~~~e~ 191 (423)
.+.|++.|+|...++-++.. . +.+.+.+.+ -.|++|++|=+. ..+..|++.+-. ...|++..+
T Consensus 60 a~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~-g~i~lVInt~~~~~~~~~d~~~iRR~Av~-~~IP~~T~~ 132 (143)
T 2yvq_A 60 SDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIRD-GSIDLVINLPNNNTKFVHDNYVIRRTAVD-SGIPLLTNF 132 (143)
T ss_dssp HHHHHHTTCCCEEECCGGGC-----CBCHHHHHHT-TSCCEEEECCCCCGGGHHHHHHHHHHHHH-TTCCEECSH
T ss_pred HHHHHHcCCeEEEEEeccCCCcccccccHHHHHHC-CCceEEEECCCCCCcCCccHHHHHHHHHH-hCCCeEcCH
Confidence 34556789998777766542 2 567776665 479999998665 367778888877 567776553
No 69
>3lap_A Arginine repressor; arginine repressor, DNA binding, DNA-canavanine ternary complex; HET: GGB; 2.15A {Mycobacterium tuberculosis} PDB: 3fhz_A* 3ere_D* 3laj_A*
Probab=39.81 E-value=1.6e+02 Score=24.45 Aligned_cols=42 Identities=29% Similarity=0.444 Sum_probs=32.0
Q ss_pred hhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 014515 101 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY 146 (423)
Q Consensus 101 l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~ 146 (423)
+...=.+||-+|+|..|-. +..++.++...++| +++-.+-|+
T Consensus 105 v~sv~~~~nlvVikT~PG~---A~~vA~~iD~~~~~-eIlGTIAGD 146 (170)
T 3lap_A 105 LVSTDDSGNLAVLRTPPGA---AHYLASAIDRAALP-QVVGTIAGD 146 (170)
T ss_dssp CCEEEEETTEEEEECSTTC---HHHHHHHHHHHTCT-TEEEEEECS
T ss_pred eeEEeecCCEEEEEeCCCc---HHHHHHHHHhCCCC-CeEEEEecC
Confidence 4445568999999987654 67788888888777 688888774
No 70
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=36.72 E-value=25 Score=29.99 Aligned_cols=53 Identities=26% Similarity=0.189 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcc--cCcceEeeecCchHHH
Q 014515 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH--MEVDKLAFTGSTTTGK 173 (423)
Q Consensus 121 ~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~--~~v~~v~~tGs~~~~~ 173 (423)
.....|.+++++.|+..-...+++.+.+.+.+.|.+. .+.|.|+.||++..+.
T Consensus 49 sn~~~L~~~L~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~DlVIttGGts~g~ 103 (185)
T 3rfq_A 49 HSGPLVTELLTEAGFVVDGVVAVEADEVDIRNALNTAVIGGVDLVVSVGGTGVTP 103 (185)
T ss_dssp SHHHHHHHHHHHTTEEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESCCSSST
T ss_pred cHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 4556788889998876666667776555566666543 4689999999986543
No 71
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=35.80 E-value=45 Score=26.52 Aligned_cols=44 Identities=18% Similarity=0.123 Sum_probs=31.4
Q ss_pred CcEEEEeCCchhHHHHhhcccCcceEeeecCchHHHHHHHHHhh
Q 014515 138 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 181 (423)
Q Consensus 138 g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~~~~~~v~~~~a~ 181 (423)
+.+++++|+.........+.+++.++++||+...-..+.+.+.+
T Consensus 53 ~~l~I~~G~r~~~~l~a~~~~~~~~iIlt~g~~~~~~i~~~A~~ 96 (139)
T 2ioj_A 53 NAALVTGGDRSDLLLTALEMPNVRCLILTGNLEPVQLVLTKAEE 96 (139)
T ss_dssp SEEEEEETTCHHHHHHHTTCTTEEEEEEETTCCCCHHHHHHHHH
T ss_pred CEEEEEcCCHHHHHHHHHhCCCCcEEEEcCCCCCCHHHHHHHHH
Confidence 56888878665544444432578999999998887888776655
No 72
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=35.18 E-value=37 Score=28.37 Aligned_cols=53 Identities=26% Similarity=0.117 Sum_probs=37.1
Q ss_pred hHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhh---cccCcceEeeecCchHH
Q 014515 120 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA---SHMEVDKLAFTGSTTTG 172 (423)
Q Consensus 120 ~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~---~~~~v~~v~~tGs~~~~ 172 (423)
-.....|.+.|.+.|+.--...+++.+.+.+.+++. ...+.|.|+.||+...+
T Consensus 39 D~ng~~L~~~L~~~G~~v~~~~iV~Dd~~~i~~al~~~~a~~~~DlVittGG~g~~ 94 (178)
T 3iwt_A 39 DESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYS 94 (178)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSS
T ss_pred cchHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEecCCcccC
Confidence 356678899999999876666667654445555553 23568999999998643
No 73
>2zfz_A Arginine repressor; DNA binding protein, core, oligomeriza domain, alpha/beta topology, structural genomics; HET: ARG; 1.85A {Mycobacterium tuberculosis} PDB: 3bue_A 3cag_A*
Probab=29.40 E-value=1.1e+02 Score=21.80 Aligned_cols=37 Identities=32% Similarity=0.551 Sum_probs=29.1
Q ss_pred ccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 014515 106 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY 146 (423)
Q Consensus 106 ~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~ 146 (423)
.++|-+|+|..|-. +..++.++.+..+|+ ++-.+-|+
T Consensus 19 ~~~n~vVikT~PG~---A~~vA~~iD~~~~~e-IlGTIAGD 55 (79)
T 2zfz_A 19 DSGNLAVLRTPPGA---AHYLASAIDRAALPQ-VVGTIAGD 55 (79)
T ss_dssp EETTEEEEECSTTC---HHHHHHHHHHHCCTT-EEEEEECS
T ss_pred ecCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecC
Confidence 47999999987644 677888888887775 88888773
No 74
>1b4b_A Arginine repressor; core, oligomerization domain, helix TUR; HET: ARG; 2.20A {Geobacillus stearothermophilus} SCOP: d.74.2.1
Probab=29.17 E-value=1e+02 Score=21.43 Aligned_cols=37 Identities=24% Similarity=0.365 Sum_probs=28.9
Q ss_pred ccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 014515 106 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY 146 (423)
Q Consensus 106 ~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~ 146 (423)
.++|-+|+|..|-. +..++.++.+..+|+ ++-.+-|+
T Consensus 11 ~~~n~vVikT~pG~---A~~va~~iD~~~~~e-I~GTIAGD 47 (71)
T 1b4b_A 11 GTGNLLVLRTLPGN---AHAIGVLLDNLDWDE-IVGTICGD 47 (71)
T ss_dssp EETTEEEEEESTTC---HHHHHHHHHHHCCTT-EEEEEECS
T ss_pred ecCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEeeC
Confidence 37999999987644 677888888887775 88888773
No 75
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=28.64 E-value=42 Score=28.20 Aligned_cols=54 Identities=24% Similarity=0.113 Sum_probs=36.4
Q ss_pred chHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcc---cCcceEeeecCchHH
Q 014515 119 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH---MEVDKLAFTGSTTTG 172 (423)
Q Consensus 119 ~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~---~~v~~v~~tGs~~~~ 172 (423)
.-.....|.+.+.+.|+..-...+++.+.+.+.++|.+. .+.|.|+.||+...+
T Consensus 38 ~Dsn~~~L~~~l~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~~DlVittGG~s~g 94 (178)
T 2pjk_A 38 VDESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYS 94 (178)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSS
T ss_pred eehHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 345666788889998876555666766545555555432 238999999998644
No 76
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=26.78 E-value=1.4e+02 Score=27.51 Aligned_cols=104 Identities=18% Similarity=0.166 Sum_probs=59.3
Q ss_pred eEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCC--ch--hHHHHhhcccCcceEeeecCchHHHHHHHHHhhC---
Q 014515 110 TIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY--GP--TAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS--- 182 (423)
Q Consensus 110 ~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~--~~--~~~~~l~~~~~v~~v~~tGs~~~~~~v~~~~a~~--- 182 (423)
.+|+.|..........+.+.|.+.|+. +.+.... +. +....+.. ...|.|+..|+..+...+.......
T Consensus 33 ~vi~Np~sg~~~~~~~i~~~l~~~g~~---~~~~~t~~~~~~~~~~~~~~~-~~~d~vvv~GGDGTl~~v~~~l~~~~~~ 108 (332)
T 2bon_A 33 LLILNGKSTDNLPLREAIMLLREEGMT---IHVRVTWEKGDAARYVEEARK-FGVATVIAGGGDGTINEVSTALIQCEGD 108 (332)
T ss_dssp EEEECSSSTTCHHHHHHHHHHHTTTCC---EEEEECCSTTHHHHHHHHHHH-HTCSEEEEEESHHHHHHHHHHHHHCCSS
T ss_pred EEEECCCCCCCchHHHHHHHHHHcCCc---EEEEEecCcchHHHHHHHHHh-cCCCEEEEEccchHHHHHHHHHhhcccC
Confidence 355666543323445567777777765 3343321 21 11122222 3579999999999999999887731
Q ss_pred CCCce-EEecCCcc-eEEEcC-CCCHHHHHHHHHHHHH
Q 014515 183 NLKPV-TLELGGKS-PFIVCE-DADVDKAAELAHYALF 217 (423)
Q Consensus 183 ~~~~~-~~e~gg~~-~~iv~~-~ad~~~aa~~iv~~~~ 217 (423)
...|+ ++-+|--| .+--.. ..|++.+++.+..+.+
T Consensus 109 ~~~plgiiP~Gt~N~fa~~l~i~~~~~~al~~i~~g~~ 146 (332)
T 2bon_A 109 DIPALGILPLGTANDFATSVGIPEALDKALKLAIAGDA 146 (332)
T ss_dssp CCCEEEEEECSSSCHHHHHTTCCSSHHHHHHHHHHSEE
T ss_pred CCCeEEEecCcCHHHHHHhcCCCCCHHHHHHHHHcCCe
Confidence 33454 34455444 221122 3578889888876544
No 77
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=26.57 E-value=3.9e+02 Score=24.75 Aligned_cols=87 Identities=11% Similarity=-0.011 Sum_probs=53.2
Q ss_pred hccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEe-CC-------chhHHHHhhcccCcceEeee---cCchHHH
Q 014515 105 LACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVS-GY-------GPTAGAALASHMEVDKLAFT---GSTTTGK 173 (423)
Q Consensus 105 L~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~-~~-------~~~~~~~l~~~~~v~~v~~t---Gs~~~~~ 173 (423)
...|+.-++.=| -..+..+...+.+.|+. .=.++. |+ -.+..+.+.++|+.+.|... |+... +
T Consensus 166 ~~~G~vgivSqS---G~l~~~i~~~~~~~g~G--~S~~VsiGn~~~~d~~~~D~l~~~~~Dp~T~~I~l~gEi~g~~e-~ 239 (334)
T 3mwd_B 166 YRPGSVAYVSRS---GGMSNELNNIISRTTDG--VYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEE-Y 239 (334)
T ss_dssp TSCCSEEEEESC---HHHHHHHHHHHHHHSSC--EEEEEECCSSSSCSSCHHHHHHHHHTCTTCCEEEEEEESSSSHH-H
T ss_pred CCCCCEEEEeCc---hHHHHHHHHHHHhcCCC--eEEEEECCCCccCCCCHHHHHHHHhcCCCCCEEEEEEecCChHH-H
Confidence 456888887533 23444555556666664 233343 22 13456788899999988874 55555 5
Q ss_pred HHHHHHhh-CCCCceEEecCCcceE
Q 014515 174 IVLQLAAK-SNLKPVTLELGGKSPF 197 (423)
Q Consensus 174 ~v~~~~a~-~~~~~~~~e~gg~~~~ 197 (423)
...+.+.+ ...||++.--.|.+..
T Consensus 240 ~~~~~~r~~~~~KPVV~~kaGrs~~ 264 (334)
T 3mwd_B 240 KICRGIKEGRLTKPIVCWCIGTCAT 264 (334)
T ss_dssp HHHHHHHTTSCCSCEEEEEECTTCC
T ss_pred HHHHHHHhhcCCCCEEEEEcCCCcc
Confidence 55555443 2468998888777653
No 78
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=26.21 E-value=39 Score=28.22 Aligned_cols=52 Identities=23% Similarity=0.158 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcc---cCcceEeeecCchHH
Q 014515 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH---MEVDKLAFTGSTTTG 172 (423)
Q Consensus 121 ~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~---~~v~~v~~tGs~~~~ 172 (423)
..+..|.+.+.+.|+......+++.+.+.+.+.|.+. .+.|.|+.||+...+
T Consensus 28 ~n~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~~~~~DlVittGG~g~~ 82 (172)
T 1mkz_A 28 TSGHYLRDSAQEAGHHVVDKAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGLT 82 (172)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHHSSSCCEEEEESCCSSS
T ss_pred ccHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCCEEEeCCCCCCC
Confidence 4456688888888876555566765444555555432 248999999998543
No 79
>1xxa_A ARGR, arginine repressor; complex (DNA binding protein/peptide); HET: ARG; 2.20A {Escherichia coli K12} SCOP: d.74.2.1 PDB: 1xxb_A* 1xxc_A
Probab=25.82 E-value=91 Score=22.23 Aligned_cols=37 Identities=24% Similarity=0.469 Sum_probs=29.9
Q ss_pred cCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 014515 107 CGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY 146 (423)
Q Consensus 107 aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~ 146 (423)
++|-+|+|..|- .+..++.++.+...+++++-.+.|+
T Consensus 14 ~~n~vVikT~PG---~A~~va~~iD~~~~~~~I~GTIAGD 50 (78)
T 1xxa_A 14 NDAVVVIHTSPG---AAQLIARLLDSLGKAEGILGTIAGD 50 (78)
T ss_dssp CSSCEEEEESTT---THHHHHHHHTTTTTTTTEEEEEECS
T ss_pred cCCEEEEEeCCC---cHHHHHHHHHhcCCCCCeEEEEecC
Confidence 799999998754 4677888888776788899999874
No 80
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=25.52 E-value=74 Score=28.58 Aligned_cols=89 Identities=16% Similarity=0.121 Sum_probs=53.9
Q ss_pred EEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCcceEeeecCchHHHHHHHHHhhC-CCCc-eE
Q 014515 111 IVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS-NLKP-VT 188 (423)
Q Consensus 111 vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~~~~~~v~~~~a~~-~~~~-~~ 188 (423)
+|.+|++.+......+.+.|.+.|+. + ....+|.|+.-|+..+...+.+..... ..+| +-
T Consensus 5 ii~n~~~~~~~~~~~l~~~l~~~g~~-----v-------------~~~~~D~vv~lGGDGT~l~aa~~~~~~~~~~PilG 66 (272)
T 2i2c_A 5 ITSKGDEKSDLLRLNMIAGFGEYDME-----Y-------------DDVEPEIVISIGGDGTFLSAFHQYEERLDEIAFIG 66 (272)
T ss_dssp EEECCSHHHHHHHHHHHHHHTTSSCE-----E-------------CSSSCSEEEEEESHHHHHHHHHHTGGGTTTCEEEE
T ss_pred EEECCCHHHHHHHHHHHHHHHHCCCE-----e-------------CCCCCCEEEEEcCcHHHHHHHHHHhhcCCCCCEEE
Confidence 45565443344444555666666543 1 024689999999999999888877652 1467 44
Q ss_pred EecCCcceEEEcCCCCHHHHHHHHHHHHH
Q 014515 189 LELGGKSPFIVCEDADVDKAAELAHYALF 217 (423)
Q Consensus 189 ~e~gg~~~~iv~~~ad~~~aa~~iv~~~~ 217 (423)
..+|..+.+-=....|++.+++.+..+.+
T Consensus 67 In~G~lgfl~~~~~~~~~~~l~~l~~g~~ 95 (272)
T 2i2c_A 67 IHTGHLGFYADWRPAEADKLVKLLAKGEY 95 (272)
T ss_dssp EESSSCCSSCCBCGGGHHHHHHHHHTTCC
T ss_pred EeCCCCCcCCcCCHHHHHHHHHHHHcCCC
Confidence 45554442211124578888888876643
No 81
>2p5m_A Arginine repressor; alpha-beta, L-arginine binding domain, DNA binding protein; HET: ARG; 1.95A {Bacillus subtilis} SCOP: d.74.2.1
Probab=24.81 E-value=1e+02 Score=22.24 Aligned_cols=37 Identities=22% Similarity=0.326 Sum_probs=29.0
Q ss_pred ccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 014515 106 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY 146 (423)
Q Consensus 106 ~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~ 146 (423)
.++|-+|+|..|-. +..++.++.+.++|+ ++-.+.|+
T Consensus 23 ~~~n~vVikT~PG~---A~~vA~~iD~~~~~e-IlGTIAGD 59 (83)
T 2p5m_A 23 SASHMIVLKTMPGN---AQAIGALMDNLDWDE-MMGTICGD 59 (83)
T ss_dssp EETTEEEEEESTTC---HHHHHHHHHTTTCTT-CCEEEECS
T ss_pred ecCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecC
Confidence 37999999987644 677888888887775 88888773
No 82
>1wu2_A MOEA protein, molybdopterin biosynthesis MOEA protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.30A {Pyrococcus horikoshii} SCOP: b.85.6.1 b.103.1.1 c.57.1.2 PDB: 1xi8_A
Probab=24.45 E-value=24 Score=33.98 Aligned_cols=52 Identities=15% Similarity=0.204 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcc-cCcceEeeecCchHHH
Q 014515 122 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH-MEVDKLAFTGSTTTGK 173 (423)
Q Consensus 122 ~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~-~~v~~v~~tGs~~~~~ 173 (423)
....|..++++.|...-...+++.+...+.+.|.+. .+.|.|+.||+...+.
T Consensus 212 n~~~L~~~l~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~~~DlvittGG~s~g~ 264 (396)
T 1wu2_A 212 NSIMLQGLVEKFFGEPILYGVLPDDESIIKETLEKAKNECDIVLITGGSAFGD 264 (396)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEECSCHHHHTTHHHHHHHCSEEEECC-------
T ss_pred hHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHhhCCCEEEEeCCCCCCh
Confidence 446688889998876555666665434444444321 2479999999987654
No 83
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=24.28 E-value=1.5e+02 Score=27.35 Aligned_cols=104 Identities=14% Similarity=0.036 Sum_probs=59.0
Q ss_pred eEEEeCCCC---chHHHHHHHHHHHHcCCCCCcEEEEeCCch-h---HHHHhhcccCcceEeeecCchHHHHHHHHHhhC
Q 014515 110 TIVLKTAEQ---TPLSALYVSKLLHEAGLPPGVLNIVSGYGP-T---AGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 182 (423)
Q Consensus 110 ~vi~kps~~---~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~-~---~~~~l~~~~~v~~v~~tGs~~~~~~v~~~~a~~ 182 (423)
.+|+.|... .......+.+.|.+.|+. +.+...... . ....+.. ...|.|+..|+..+...+.......
T Consensus 28 ~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~---~~~~~t~~~~~a~~~~~~~~~-~~~d~vvv~GGDGTv~~v~~~l~~~ 103 (337)
T 2qv7_A 28 RIIYNPTSGKEQFKRELPDALIKLEKAGYE---TSAYATEKIGDATLEAERAMH-ENYDVLIAAGGDGTLNEVVNGIAEK 103 (337)
T ss_dssp EEEECTTSTTSCHHHHHHHHHHHHHHTTEE---EEEEECCSTTHHHHHHHHHTT-TTCSEEEEEECHHHHHHHHHHHTTC
T ss_pred EEEECCCCCCCchHHHHHHHHHHHHHcCCe---EEEEEecCcchHHHHHHHHhh-cCCCEEEEEcCchHHHHHHHHHHhC
Confidence 356666543 223445677788887654 333332221 1 1222222 3579999999999999998887321
Q ss_pred -CCCce-EEecCCcceEE-Ec-CCCCHHHHHHHHHHHHH
Q 014515 183 -NLKPV-TLELGGKSPFI-VC-EDADVDKAAELAHYALF 217 (423)
Q Consensus 183 -~~~~~-~~e~gg~~~~i-v~-~~ad~~~aa~~iv~~~~ 217 (423)
...|+ ++-+|--|-+. .+ -..|++.|++.+..+.+
T Consensus 104 ~~~~pl~iIP~GT~N~lAr~Lg~~~~~~~al~~i~~g~~ 142 (337)
T 2qv7_A 104 PNRPKLGVIPMGTVNDFGRALHIPNDIMGALDVIIEGHS 142 (337)
T ss_dssp SSCCEEEEEECSSCCHHHHHTTCCSSHHHHHHHHHHTCE
T ss_pred CCCCcEEEecCCcHhHHHHHcCCCCCHHHHHHHHHcCCc
Confidence 23343 44444333222 11 23578889998887644
No 84
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=24.07 E-value=45 Score=27.94 Aligned_cols=53 Identities=15% Similarity=0.065 Sum_probs=36.0
Q ss_pred chHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcc-cCcceEeeecCchH
Q 014515 119 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH-MEVDKLAFTGSTTT 171 (423)
Q Consensus 119 ~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~-~~v~~v~~tGs~~~ 171 (423)
.-..+..|.+.+.+.|+......+++.+...+.+.|... .+.|.|+.||+...
T Consensus 21 ~DtN~~~l~~~L~~~G~~v~~~~iv~Dd~~~I~~~l~~a~~~~DlVittGG~g~ 74 (172)
T 3kbq_A 21 VNTNAAFIGNFLTYHGYQVRRGFVVMDDLDEIGWAFRVALEVSDLVVSSGGLGP 74 (172)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHHHCSEEEEESCCSS
T ss_pred EeHHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCEEEEcCCCcC
Confidence 335666788899999987666777766545555555432 24788888888754
No 85
>2l2l_A Transcriptional repressor P66-alpha; DNA methylation, coiled-coil, NURD, MBD2, P66alpha, transfer; NMR {Homo sapiens}
Probab=23.77 E-value=1.3e+02 Score=18.44 Aligned_cols=21 Identities=19% Similarity=0.333 Sum_probs=17.1
Q ss_pred CHHHHHHHHHHHHHHHHHcHH
Q 014515 2 TAYERSKIILRFADLLERHND 22 (423)
Q Consensus 2 ~~~~R~~~L~~la~~l~~~~~ 22 (423)
|+++|...++++.+.|+...-
T Consensus 2 s~~ere~~i~~LreeLR~EEa 22 (43)
T 2l2l_A 2 SPEERERMIKQLKEELRLEEA 22 (43)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHH
Confidence 789999999999998875433
No 86
>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA, national PR protein structural and functional analyses; 1.70A {Aquifex aeolicus} PDB: 2qq1_A 3mci_A 3mcj_A 3k6a_A* 2f7w_A 2f7y_A 2fuw_A
Probab=23.26 E-value=56 Score=27.35 Aligned_cols=51 Identities=12% Similarity=0.069 Sum_probs=33.7
Q ss_pred HHHHHHHHHHH---HcCCCCCcEEEEeCCchhHHHHhhcc---cCcceEeeecCchHH
Q 014515 121 LSALYVSKLLH---EAGLPPGVLNIVSGYGPTAGAALASH---MEVDKLAFTGSTTTG 172 (423)
Q Consensus 121 ~~~~~l~~~l~---~ag~P~g~v~~v~~~~~~~~~~l~~~---~~v~~v~~tGs~~~~ 172 (423)
.....|.++++ +.|+.. ...+++.+.+.+.+.|.+. .+.|.|+.||+...+
T Consensus 25 sn~~~l~~~l~~l~~~G~~v-~~~iv~Dd~~~I~~~l~~~~~~~~~DlVittGG~g~g 81 (178)
T 2pbq_A 25 ISGKAIIDYLKDVIITPFEV-EYRVIPDERDLIEKTLIELADEKGCSLILTTGGTGPA 81 (178)
T ss_dssp HHHHHHHHHHHHHBCSCCEE-EEEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSS
T ss_pred chHHHHHHHHHHHHhCCCEE-EEEEcCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 45566777777 778766 5666765445555555432 268999999998544
No 87
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=22.00 E-value=41 Score=27.74 Aligned_cols=51 Identities=16% Similarity=0.183 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcc---cCcceEeeecCchHH
Q 014515 122 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH---MEVDKLAFTGSTTTG 172 (423)
Q Consensus 122 ~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~---~~v~~v~~tGs~~~~ 172 (423)
....|.+.+++.|+......+++.+.+.+.+.|.+. .+.|.|+.||+...+
T Consensus 22 n~~~l~~~l~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g 75 (164)
T 2is8_A 22 THLAIREVLAGGPFEVAAYELVPDEPPMIKKVLRLWADREGLDLILTNGGTGLA 75 (164)
T ss_dssp HHHHHHHHHTTSSEEEEEEEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSS
T ss_pred hHHHHHHHHHHCCCeEeEEEEcCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCC
Confidence 455678888888765555566665445555555432 158999999998644
No 88
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=21.73 E-value=82 Score=26.52 Aligned_cols=124 Identities=15% Similarity=0.034 Sum_probs=78.6
Q ss_pred ceeEeeccc-eeEEEEccCch-hHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeC-Cchh
Q 014515 73 HVQTLHEPI-GVAGQIIPWNF-PLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSG-YGPT 149 (423)
Q Consensus 73 ~~~~~~~P~-Gvv~~i~p~n~-P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~-~~~~ 149 (423)
.......|. |.|+++...+- +-...+.+-...++.|..++- +.-|+..|.+. .|+|...++=++. .++.
T Consensus 18 ~~~~~~lP~~g~V~lsv~D~dK~~lv~~ak~~~~lL~Gf~L~A-----T~gTa~~L~e~---~Gl~v~~v~k~~eGG~pq 89 (178)
T 1vmd_A 18 RRYKIFMDKKKRIALIAHDRRKRDLLEWVSFNLGTLSKHELYA-----TGTTGALLQEK---LGLKVHRLKSGPLGGDQQ 89 (178)
T ss_dssp CEEEEEECSSCEEEEEECGGGHHHHHHHHHHSHHHHTTSEEEE-----CHHHHHHHHHH---HCCCCEECSCGGGTHHHH
T ss_pred cceeeeCCCCCEEEEEEehhhHHHHHHHHHHHHHHhcCCEEEE-----chHHHHHHHHH---hCceeEEEeecCCCCCch
Confidence 344455564 76666655443 555556666677778998775 34455444431 7999765554432 2345
Q ss_pred HHHHhhcccCcceEeeecC-------chHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccC
Q 014515 150 AGAALASHMEVDKLAFTGS-------TTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 221 (423)
Q Consensus 150 ~~~~l~~~~~v~~v~~tGs-------~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~G 221 (423)
+++.+.+ -.|++|+||=+ ...+..|.+.|.. ...|+..-+ ..|+.++.+.+++..
T Consensus 90 I~d~I~~-geIdlVInt~dPl~~~~h~~D~~~IRR~A~~-~~IP~~Tnl---------------atA~A~v~ail~~~~ 151 (178)
T 1vmd_A 90 IGAMIAE-GKIDVLIFFWDPLEPQAHDVDVKALIRIATV-YNIPVAITR---------------STADFLISSPLMNDV 151 (178)
T ss_dssp HHHHHHT-TSCCEEEEECCSSSCCTTSCCHHHHHHHHHH-TTCCEESSH---------------HHHHHHHHSGGGGSC
T ss_pred HHHHHHC-CCccEEEEccCccCCCcccccHHHHHHHHHH-cCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 6666655 58999999876 3456888888887 556665543 456777888777654
No 89
>1di6_A MOGA, molybdenum cofactor biosynthetic enzyme; MOCO, MOCO biosynthesis, gephyrin function; 1.45A {Escherichia coli} SCOP: c.57.1.1 PDB: 1di7_A
Probab=21.37 E-value=58 Score=27.83 Aligned_cols=51 Identities=14% Similarity=0.049 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHcCCC--CCcEEEEeCCchhHHHHhhcc---cCcceEeeecCchHH
Q 014515 122 SALYVSKLLHEAGLP--PGVLNIVSGYGPTAGAALASH---MEVDKLAFTGSTTTG 172 (423)
Q Consensus 122 ~~~~l~~~l~~ag~P--~g~v~~v~~~~~~~~~~l~~~---~~v~~v~~tGs~~~~ 172 (423)
....|.+.+.+.|.. .-...+++.+.+.+.++|.+. .+.|.|+.||++..+
T Consensus 24 n~~~L~~~L~~~G~~~~v~~~~iV~Dd~~~I~~al~~a~~~~~~DlVitTGGtg~g 79 (195)
T 1di6_A 24 GIPALEEWLTSALTTPFELETRLIPDEQAIIEQTLCELVDEMSCHLVLTTGGTGPA 79 (195)
T ss_dssp HHHHHHHHHHHHBCSCEEEEEEEEESCHHHHHHHHHHHHHTSCCSEEEEESCCSSS
T ss_pred HHHHHHHHHHHcCCCCceEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 456688888888875 234566765544555555432 258999999998643
No 90
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.37 E-value=42 Score=28.24 Aligned_cols=46 Identities=13% Similarity=0.158 Sum_probs=32.2
Q ss_pred cccccCeeEEEecCCHHHHHHHH----hcCCCCceEEEecCCHHHHHHHH
Q 014515 320 DEIFGPVQSILKYKDLDEVIQRS----NASQYGLAAGVFTHNLDTANTLM 365 (423)
Q Consensus 320 ~E~fgPvl~v~~~~~~~eai~~~----n~~~~gl~~~v~s~d~~~~~~~~ 365 (423)
+|-||+..+..--.+.++|++.+ .+...-|-.++++......+.|.
T Consensus 25 ~~~yg~~~p~F~~gs~~~Al~~A~~~~k~e~K~LlVyLhs~~~~~~~~f~ 74 (178)
T 2ec4_A 25 SSRYGDCHPVFFIGSLEAAFQEAFYVKARDRKLLAIYLHHDESVLTNVFC 74 (178)
T ss_dssp HHHHCSCCCCCCCSCHHHHHHTTTSSCTTTCCEEEEEEECSSCSHHHHHH
T ss_pred HHHhCCCCCCeeeCCHHHHHHHHHhhhhhhCcEEEEEEeCCCCccHHHHH
Confidence 35567666555557899999999 66666789999987654444444
Done!