Your job contains 1 sequence.
>014516
MSTRENSYTEAEALNLLAQLERILDLDPLIDEVGFIHPSQFATLKEEIGDSLSSEDRDHE
STSFWIRDHKLGISTQILIPVYKAAKHAFISALRQYKTPGNFSGKSQDDTLAIEVMIHSK
ALLLLSCDFATAWNSRKLIVSNKRLLPILMDELHLSALVLSYSPKSEQAWSHRRWVINMI
SRNCSTLQWIIERESELVEKIAERSKMNYRAWNHRCWLVSFMTREQVLDELKKSRNWSGL
HVADNSCFHYRRRLMLRNLEGFCYTQDNNSSGYFVETYQIWKEELDWNESLIKQYVGREA
LWLHRRFLSMYLIKHMATHLLAVSCQSKPKASVDIDIDSLMDHELCLVHSCSTTIADANF
EEAQAIHSAAYMLWLTKQIPEYQGIDIQEKLRAGVGDVTRMLKRSCPDRSSLWDYLVGYH
SEP
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 014516
(423 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:1005716686 - symbol:AT1G10095 species:3702 "Ar... 1016 1.6e-102 1
DICTYBASE|DDB_G0287077 - symbol:DDB_G0287077 "protein pre... 337 1.4e-30 1
UNIPROTKB|F1P1Q8 - symbol:PTAR1 "Uncharacterized protein"... 252 3.0e-21 1
FB|FBgn0027296 - symbol:l(1)G0144 "lethal (1) G0144" spec... 255 7.1e-20 1
RGD|708369 - symbol:Ptar1 "protein prenyltransferase alph... 188 6.2e-16 2
UNIPROTKB|Q7Z6K3 - symbol:PTAR1 "Protein prenyltransferas... 186 8.0e-16 2
UNIPROTKB|F1PEG1 - symbol:PTAR1 "Uncharacterized protein"... 181 1.5e-15 2
UNIPROTKB|F1SJD0 - symbol:PTAR1 "Uncharacterized protein"... 182 3.3e-15 2
UNIPROTKB|J9P4Q0 - symbol:PTAR1 "Uncharacterized protein"... 181 4.3e-15 2
ZFIN|ZDB-GENE-060526-17 - symbol:ptar1 "protein prenyltra... 174 1.3e-14 2
UNIPROTKB|F1P1Q7 - symbol:PTAR1 "Uncharacterized protein"... 173 1.8e-12 1
UNIPROTKB|F1N382 - symbol:Bt.90693 "Uncharacterized prote... 187 9.4e-12 1
UNIPROTKB|G5E608 - symbol:Bt.90693 "Uncharacterized prote... 187 9.4e-12 1
UNIPROTKB|F1NK31 - symbol:PTAR1 "Uncharacterized protein"... 173 2.7e-10 1
TAIR|locus:2121860 - symbol:RGTA1 "RAB geranylgeranyl tra... 161 1.7e-08 1
DICTYBASE|DDB_G0269570 - symbol:rabggta "protein geranylg... 130 1.2e-05 1
UNIPROTKB|H0YE66 - symbol:H0YE66 "Uncharacterized protein... 122 2.6e-05 1
ZFIN|ZDB-GENE-030131-866 - symbol:fnta "farnesyltransfera... 126 4.8e-05 1
UNIPROTKB|E9PQP6 - symbol:FNTA "Protein farnesyltransfera... 122 5.3e-05 1
TAIR|locus:2081177 - symbol:FTA "farnesyltransferase A" s... 124 6.1e-05 1
DICTYBASE|DDB_G0283053 - symbol:fntA "protein prenyltrans... 110 6.8e-05 3
ZFIN|ZDB-GENE-060929-1042 - symbol:rabggta "Rab geranylge... 127 7.5e-05 1
RGD|2625 - symbol:Fnta "farnesyltransferase, CAAX box, al... 123 0.00010 1
UNIPROTKB|Q04631 - symbol:Fnta "Protein farnesyltransfera... 123 0.00010 1
UNIPROTKB|F1MGN1 - symbol:RABGGTA "Geranylgeranyl transfe... 122 0.00011 1
UNIPROTKB|H0YCW1 - symbol:FNTA "Protein farnesyltransfera... 116 0.00011 1
UNIPROTKB|H0YLH3 - symbol:RABGGTA "Geranylgeranyl transfe... 123 0.00013 1
UNIPROTKB|F1N081 - symbol:FNTA "Protein farnesyltransfera... 122 0.00013 1
UNIPROTKB|P29702 - symbol:FNTA "Protein farnesyltransfera... 122 0.00013 1
UNIPROTKB|P49354 - symbol:FNTA "Protein farnesyltransfera... 122 0.00014 1
UNIPROTKB|Q92696 - symbol:RABGGTA "Geranylgeranyl transfe... 123 0.00020 1
UNIPROTKB|A5A779 - symbol:RABGGTA "Geranylgeranyl transfe... 123 0.00020 1
UNIPROTKB|E2RHY8 - symbol:FNTA "Uncharacterized protein" ... 120 0.00023 1
UNIPROTKB|Q5EA80 - symbol:RABGGTA "Geranylgeranyl transfe... 122 0.00026 1
UNIPROTKB|F1PIE1 - symbol:RABGGTA "Uncharacterized protei... 122 0.00026 1
MGI|MGI:1860443 - symbol:Rabggta "Rab geranylgeranyl tran... 122 0.00026 1
POMBASE|SPCC1620.05 - symbol:SPCC1620.05 "Rab geranylgera... 118 0.00032 1
SGD|S000003568 - symbol:BET4 "Alpha subunit of Type II ge... 117 0.00037 1
RGD|621697 - symbol:Rabggta "Rab geranylgeranyltransferas... 120 0.00043 1
TAIR|locus:2153015 - symbol:RGTA2 "RAB geranylgeranyl tra... 118 0.00092 1
>TAIR|locus:1005716686 [details] [associations]
symbol:AT1G10095 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008318 "protein
prenyltransferase activity" evidence=IEA] [GO:0018342 "protein
prenylation" evidence=IEA] InterPro:IPR002088 Pfam:PF01239
PROSITE:PS51147 EMBL:CP002684 GenomeReviews:CT485782_GR
EMBL:AC004122 GO:GO:0008318 GO:GO:0018342 KO:K14137
eggNOG:NOG120449 IPI:IPI00520630 PIR:T00629 RefSeq:NP_849630.3
UniGene:At.50926 ProteinModelPortal:O80601 SMR:O80601 PaxDb:O80601
PRIDE:O80601 EnsemblPlants:AT1G10095.1 GeneID:837545
KEGG:ath:AT1G10095 TAIR:At1g10095 HOGENOM:HOG000082751
InParanoid:O80601 OMA:QGRESLW PhylomeDB:O80601
ProtClustDB:CLSN2918916 Genevestigator:O80601 Uniprot:O80601
Length = 420
Score = 1016 (362.7 bits), Expect = 1.6e-102, P = 1.6e-102
Identities = 216/405 (53%), Positives = 277/405 (68%)
Query: 23 ILDLDPLIDEVGFIHPSQFATLKEEIGDSLSSEDRDHESTSFWIRDHKLGISTQILIPVY 82
+L+ DPLIDEVGFIHPSQF L +E G S + + S+ FW +DHKLGIST IL+ +
Sbjct: 21 VLESDPLIDEVGFIHPSQFTMLDKEAGFSNEFQPNNGTSSKFWNQDHKLGISTDILVQLC 80
Query: 83 KAAKHAFISALRQYKTPGNFSGKSQDDTLAI-------EVMIHSKALLLLSCDFATAWNS 135
K AKH F+ AL++YK+ GN +SQ ++ +VM HS+++LLLS DF TAWN+
Sbjct: 81 KDAKHVFLLALQEYKSHGNACDESQIKNISCSPCIPESDVMKHSQSVLLLSSDFGTAWNA 140
Query: 136 RKLIVSNKRLLPILMDELHLSALVLSYSPKSEQAWSHRRWVINMISRNCSTLQWIIERES 195
RKLI+S K L +EL LS L+LS SPKSE WSHRRW+I MIS++ STLQ II +ES
Sbjct: 141 RKLILSKKDHLSAFTEELRLSGLILSNSPKSESTWSHRRWIIKMISQSFSTLQEIITKES 200
Query: 196 ELVEKIAERSKMNYRAWNHRCWLVSFMTREQVLDELKKSRNWSGLHVADNSCFHYRRRLM 255
ELVE I ERSKMNYRAW HRCWLVS+MT EQV+ EL KS+ W+GLHVAD+SCFHYRRRLM
Sbjct: 201 ELVESIGERSKMNYRAWYHRCWLVSYMTIEQVIQELNKSKRWAGLHVADSSCFHYRRRLM 260
Query: 256 LRNLEGFCYTQDNNSSGYF-VETYQIWKEELDWNESLIKQYVGREALWLHRRFLSMYLIK 314
L+ LE Y + SS Y E +IWKEELDWNE L+++YVGREALWLHRRFLS+ I
Sbjct: 261 LKILESL-YVK--GSSAYDKTEARKIWKEELDWNEELVERYVGREALWLHRRFLSLNWIM 317
Query: 315 HMATHLLAVSCQSKPKASVDIDIDSLMDHELCLVHSCSTTIADANFEE--AQAIHSAAYM 372
+ A + S ++ ++ +I +D+E+ L+ S S T+ D FE+ AQA+H+A Y
Sbjct: 318 YFACNHSDASPETGESIIMNEEIAIFIDNEIRLLDS-SMTVPDTKFEDFQAQALHAAVYT 376
Query: 373 LWLTKQIPEYQGIDIQEKLRAGVGDVTRMLKRSCPDRSSLWDYLV 417
LWLTK IP + ++EKL G V +L +R SL +LV
Sbjct: 377 LWLTKSIPVLWRM-LEEKL--GTEKVKCVLNTIAQERPSLLHHLV 418
>DICTYBASE|DDB_G0287077 [details] [associations]
symbol:DDB_G0287077 "protein prenyltransferase alpha
subunit" species:44689 "Dictyostelium discoideum" [GO:0018342
"protein prenylation" evidence=IEA] [GO:0008318 "protein
prenyltransferase activity" evidence=IEA] InterPro:IPR002088
Pfam:PF01239 PROSITE:PS51147 dictyBase:DDB_G0287077
EMBL:AAFI02000096 GO:GO:0008318 GO:GO:0018342 KO:K14137
eggNOG:NOG120449 RefSeq:XP_637415.1 ProteinModelPortal:Q54KV5
EnsemblProtists:DDB0187271 GeneID:8625947 KEGG:ddi:DDB_G0287077
InParanoid:Q54KV5 OMA:THRWWIL Uniprot:Q54KV5
Length = 406
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 101/384 (26%), Positives = 194/384 (50%)
Query: 47 EIGDSLSSEDRDH-ESTSFWIRDHKLGISTQILIPVYKAAKHAFISALRQYKTPGNFSGK 105
EIG +SS+D D E+ F + ++KLGIS Q +I +Y A F ++ N +
Sbjct: 30 EIGFVMSSKDYDGLENKPFVLVENKLGISFQWMIKLYSYALTYFTELKSAFEKKMNDLPE 89
Query: 106 SQDDTLAIEVMIHSKALLLLSCDFATAWNSRKLIVSNKRLLPILMDELHLSALVLSYSPK 165
L E++ ++ +LL++ + TA N RK +++ K + DE+ L L+ + PK
Sbjct: 90 RHQQLLVNELLQATRNVLLINAENLTALNLRKELINLKYIKH--KDEISLLNLIFTKHPK 147
Query: 166 SEQAWSHRRWVI-NMISRNCSTLQWIIERESELVEKIAERSKMNYRAWNHRCWLVSFMTR 224
S + W+HR+WVI + + L + E E + +++AE NY +W HR W++ ++
Sbjct: 148 SGEGWAHRKWVITDYFKKTGDYLDY--EIELAVCKRVAEIYPKNYYSWTHRWWILQHLSV 205
Query: 225 EQVLDELKKSRNWSGLHVADNSCFHYRRRLMLRNLEGFCYTQ--DNNSS-------GYFV 275
+ +L +L+ +W +++D C ++ R L+L +L CY DNN++ +
Sbjct: 206 DIILKDLETMEDWVKRNISDY-CGYHHRYLILTHLFNKCYNSNDDNNNNESKSEENSNEM 264
Query: 276 ETYQIWKEELDWNESLIKQYVGREALWLHRRFLSMYLIKHMATHLLAVSCQSKPKASVDI 335
+ +++W++E ++ +I Y G E+ W ++R L+++ ++ +A + S +
Sbjct: 265 KIHKLWEDEFNFIHKIINLYPGHESSWSYKRVLTLFWLQ------IAQPIVFQRNISTTV 318
Query: 336 DIDSLMDHELCLVHSCSTTIADANFEEAQAIHSAAYMLWLT----KQIPEYQGIDIQEKL 391
I SL E V S I D+++ E Q + Y+L + K ++ IDI +++
Sbjct: 319 PITSLQQ-ESQFVDSILEDI-DSSYYEQQKSFAQRYLLSIYELKFKDSADFS-IDI-DQV 374
Query: 392 RAGVGDVTRMLKRSCPDRSSLWDY 415
+ + LK S P++ +W+Y
Sbjct: 375 KNNYSIIINDLKISFPNQLKVWEY 398
>UNIPROTKB|F1P1Q8 [details] [associations]
symbol:PTAR1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008318 "protein prenyltransferase activity"
evidence=IEA] [GO:0018342 "protein prenylation" evidence=IEA]
InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147 GO:GO:0008318
GO:GO:0018342 GeneTree:ENSGT00390000017892 EMBL:AADN02078226
EMBL:AADN02078227 IPI:IPI00819099 Ensembl:ENSGALT00000038217
ArrayExpress:F1P1Q8 Uniprot:F1P1Q8
Length = 208
Score = 252 (93.8 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 68/204 (33%), Positives = 109/204 (53%)
Query: 68 DHKLGIST---QILIPVYKAAKHAFISALRQYKTPGNFSGKSQDDTLAIEVMIHSKALLL 124
++KLG+ + + L+P H + RQ K N +Q T I+++ + LLL
Sbjct: 18 ENKLGVESWCVKFLLPYV----HNKLLLYRQRKQWLNKD--AQGCTEIIKLIDTTCTLLL 71
Query: 125 LSCDFATAWNSRKLIVSNKRLLPILMDELHLSALVLSYSPKSEQAWSHRRWVINMISRNC 184
L+ DF TAWN RK ++ + L P+ +LHL L L+ PKS + W HR ++ +S
Sbjct: 72 LNPDFTTAWNVRKELILSGTLSPL--KDLHLGKLALTKFPKSPETWIHRFYLFFFLSHRD 129
Query: 185 STLQWIIERESELVEKIAERSKMNYRAWNHRCWLVSFMTREQVLDELKKSRNWSGLHVAD 244
E E ++ + A R NY AW+HR W++ + + +LDEL ++ W +HV+D
Sbjct: 130 ------YEEEMDVCSEAAGRYPSNYNAWSHRIWVLQNVGKI-LLDELSSTKYWVSMHVSD 182
Query: 245 NSCFHYRRRLMLRNLEGFCYTQDN 268
+S FHYR+ +L++L G DN
Sbjct: 183 HSGFHYRQ-FLLKSLIGRTVNDDN 205
>FB|FBgn0027296 [details] [associations]
symbol:l(1)G0144 "lethal (1) G0144" species:7227 "Drosophila
melanogaster" [GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=ISS] [GO:0005968 "Rab-protein geranylgeranyltransferase
complex" evidence=ISS] [GO:0018342 "protein prenylation"
evidence=IEA] InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147
EMBL:AE014298 GO:GO:0018342 GO:GO:0004663
GeneTree:ENSGT00390000017892 KO:K14137 eggNOG:NOG120449
EMBL:AY069689 RefSeq:NP_569992.1 UniGene:Dm.2001 SMR:Q9W501
MINT:MINT-882683 EnsemblMetazoa:FBtr0070414 GeneID:31212
KEGG:dme:Dmel_CG3073 UCSC:CG3073-RA FlyBase:FBgn0027296
InParanoid:Q9W501 OMA:AYRRWLY OrthoDB:EOG402V85 GenomeRNAi:31212
NextBio:772477 Uniprot:Q9W501
Length = 398
Score = 255 (94.8 bits), Expect = 7.1e-20, P = 7.1e-20
Identities = 67/209 (32%), Positives = 107/209 (51%)
Query: 68 DHKLGISTQILIPVYKAAKHAFISALRQYKTPG--NFSGKSQDDTLAIEVMIHSKALLLL 125
+H LG+ + VY A IS RQ + Q D+LA + + LL+
Sbjct: 50 EHNLGLESWCAQHVYDHAHRTLISHRRQTTAQQLRTLQQQQQSDSLAKYLNV----ALLI 105
Query: 126 SCDFATAWNSRKLIVSNKRLLPILMDELHLSALVLSYSPKSEQAWSHRRWVINMISRNCS 185
+ D T W+ R+ +V RL + EL SALVLS PKS +A+++RRW+ + ++
Sbjct: 106 NPDVTTFWHIRRQLVQKNRLS--INKELQFSALVLSIKPKSNEAFAYRRWLYSF--QSAD 161
Query: 186 TLQWIIERESELVEKIAERSKMNYRAWNHRCWLVSFMTREQVLD-ELKKSRNWSGLHVAD 244
+ W E + E+ A+R NY AW+HR W++ +L EL ++ + H++D
Sbjct: 162 AIDW--PNEIGICERAADRCASNYHAWSHRQWILQ--NGPCLLQSELLRTEKFMRKHISD 217
Query: 245 NSCFHYRRRLMLRNLE-GFCYTQDNNSSG 272
SC+HYR+ L+ R E F +D+ +SG
Sbjct: 218 YSCYHYRQVLLSRAYELSFALPKDSGASG 246
>RGD|708369 [details] [associations]
symbol:Ptar1 "protein prenyltransferase alpha subunit repeat
containing 1" species:10116 "Rattus norvegicus" [GO:0008318
"protein prenyltransferase activity" evidence=IEA] [GO:0018342
"protein prenylation" evidence=IEA] InterPro:IPR002088 Pfam:PF01239
PROSITE:PS51147 RGD:708369 EMBL:CH473953 GO:GO:0008318
GO:GO:0018342 CTD:375743 GeneTree:ENSGT00390000017892 KO:K14137
OrthoDB:EOG46WZ8F IPI:IPI00778970 RefSeq:NP_001099230.2
UniGene:Rn.107234 Ensembl:ENSRNOT00000054775 GeneID:286972
KEGG:rno:286972 NextBio:625193 Uniprot:D3ZWG9
Length = 425
Score = 188 (71.2 bits), Expect = 6.2e-16, Sum P(2) = 6.2e-16
Identities = 44/114 (38%), Positives = 61/114 (53%)
Query: 122 LLLLSCDFATAWNSRKLIVSNKRLLPILMDELHLSALVLSYSPKSEQAWSHRRWVINMIS 181
LLLL+ DF TAWN RK ++ + L P+ +LHL L L+ PKS + W HRRWV+ +S
Sbjct: 94 LLLLNPDFTTAWNVRKELILSGTLSPV--KDLHLGKLALTKFPKSPETWIHRRWVLQQLS 151
Query: 182 RNCST----------------LQWIIERESELVEKIAERSKMNYRAWNHRCWLV 219
+ S Q II+ E E+ + A R NY AW+HR W++
Sbjct: 152 QETSLPSSVAKGSLGVVPAERTQRIIQEEMEVCSEAAGRYPSNYNAWSHRIWVL 205
Score = 152 (58.6 bits), Expect = 9.3e-12, Sum P(2) = 9.3e-12
Identities = 29/75 (38%), Positives = 50/75 (66%)
Query: 188 QWIIERESELVEKIAERSKMNYRAWNHRCWLVSFMTR---EQVLDELKKSRNWSGLHVAD 244
Q II+ E E+ + A R NY AW+HR W++ + + + +LDEL +++W+ +HV+D
Sbjct: 174 QRIIQEEMEVCSEAAGRYPSNYNAWSHRIWVLQNVAKLDLKILLDELSSTKHWASVHVSD 233
Query: 245 NSCFHYRRRLMLRNL 259
+S FHYR+ +L++L
Sbjct: 234 HSGFHYRQ-FLLKSL 247
Score = 79 (32.9 bits), Expect = 6.2e-16, Sum P(2) = 6.2e-16
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 279 QIWKEELDWNESLIKQYVGREALWLHRRFLSMYLIKHM 316
Q+ +EE+++ LI Y G E LW HRR + YL H+
Sbjct: 286 QLLEEEVEFCTDLIDSYPGHETLWCHRRHV-FYLQHHL 322
>UNIPROTKB|Q7Z6K3 [details] [associations]
symbol:PTAR1 "Protein prenyltransferase alpha subunit
repeat-containing protein 1" species:9606 "Homo sapiens"
[GO:0008318 "protein prenyltransferase activity" evidence=IEA]
[GO:0018342 "protein prenylation" evidence=IEA] InterPro:IPR002088
Pfam:PF01239 PROSITE:PS51147 EMBL:AL162412 GO:GO:0008318
GO:GO:0018342 CTD:375743 HOGENOM:HOG000115755 HOVERGEN:HBG108302
KO:K14137 EMBL:BC053622 IPI:IPI00399115 RefSeq:NP_001093136.1
UniGene:Hs.625945 ProteinModelPortal:Q7Z6K3 SMR:Q7Z6K3
IntAct:Q7Z6K3 PhosphoSite:Q7Z6K3 DMDM:167012004 PaxDb:Q7Z6K3
PRIDE:Q7Z6K3 Ensembl:ENST00000340434 Ensembl:ENST00000377200
GeneID:375743 KEGG:hsa:375743 UCSC:uc004ahi.3 GeneCards:GC09M072324
HGNC:HGNC:30449 HPA:HPA021248 neXtProt:NX_Q7Z6K3
PharmGKB:PA134897041 eggNOG:NOG120449 OMA:TRKQWLN GenomeRNAi:375743
NextBio:100588 ArrayExpress:Q7Z6K3 Bgee:Q7Z6K3 CleanEx:HS_PTAR1
Genevestigator:Q7Z6K3 Uniprot:Q7Z6K3
Length = 402
Score = 186 (70.5 bits), Expect = 8.0e-16, Sum P(2) = 8.0e-16
Identities = 45/122 (36%), Positives = 65/122 (53%)
Query: 122 LLLLSCDFATAWNSRKLIVSNKRLLPILMDELHLSALVLSYSPKSEQAWSHRRWVINMIS 181
LLLL+ DF TAWN RK ++ + L PI +LHL L L+ PKS + W HRRWV+ +
Sbjct: 94 LLLLNPDFTTAWNVRKELILSGTLNPI--KDLHLGKLALTKFPKSPETWIHRRWVLQQLI 151
Query: 182 R-----------NCSTL-----QWIIERESELVEKIAERSKMNYRAWNHRCWLVSFMTRE 225
+ N T+ Q +I+ E E+ + A R NY AW+HR W++ + +
Sbjct: 152 QETSLPSFVTKGNLGTIPTERAQRLIQEEMEVCGEAAGRYPSNYNAWSHRIWVLQHLAKL 211
Query: 226 QV 227
V
Sbjct: 212 DV 213
Score = 154 (59.3 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 29/75 (38%), Positives = 49/75 (65%)
Query: 188 QWIIERESELVEKIAERSKMNYRAWNHRCWLVSFMTREQV---LDELKKSRNWSGLHVAD 244
Q +I+ E E+ + A R NY AW+HR W++ + + V LDEL +++W+ +HV+D
Sbjct: 174 QRLIQEEMEVCGEAAGRYPSNYNAWSHRIWVLQHLAKLDVKILLDELSSTKHWASMHVSD 233
Query: 245 NSCFHYRRRLMLRNL 259
+S FHYR+ +L++L
Sbjct: 234 HSGFHYRQ-FLLKSL 247
Score = 79 (32.9 bits), Expect = 8.0e-16, Sum P(2) = 8.0e-16
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 282 KEELDWNESLIKQYVGREALWLHRRFLSMYLIKHM 316
+EE++++ LI Y G E LW HRR + YL H+
Sbjct: 293 EEEVEFSTDLIDSYPGHETLWCHRRHI-FYLQHHL 326
>UNIPROTKB|F1PEG1 [details] [associations]
symbol:PTAR1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0018342 "protein prenylation" evidence=IEA]
[GO:0008318 "protein prenyltransferase activity" evidence=IEA]
InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147 GO:GO:0008318
GO:GO:0018342 CTD:375743 GeneTree:ENSGT00390000017892 KO:K14137
EMBL:AAEX03000572 RefSeq:XP_859263.2 Ensembl:ENSCAFT00000002994
GeneID:484173 KEGG:cfa:484173 Uniprot:F1PEG1
Length = 402
Score = 181 (68.8 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 65/201 (32%), Positives = 97/201 (48%)
Query: 46 EEIGDSLSSEDRDHESTSFWIRDHKLGIST---QILIPVYKAAKHAFISALRQYKTPGNF 102
+EIG E R + S + ++KLG+ + + L+P H + L Y+T +
Sbjct: 30 DEIGLIPCPEARYNRSPIVLV-ENKLGVESWCVKFLLPYV----H---NKLLLYRTRKQW 81
Query: 103 SGKSQDDTLAIEVMIHSKALLLLSCDFATAWNSRKLIVSNKRLLPILMDELHLSALVLSY 162
K D L I+V LLLL+ DF TAWN RK ++ + L PI +L+L L L+
Sbjct: 82 LNK---DEL-IDVTC---TLLLLNPDFTTAWNVRKELILSGTLNPI--KDLYLGKLALTK 132
Query: 163 SPKSEQAWSHRRWVIN-----------MISRNCSTL-----QWIIERESELVEKIAERSK 206
PKS + W HRRWV+ M+ N T+ Q +I E E+ + A R
Sbjct: 133 FPKSPETWIHRRWVLQQLIQETSLPSFMMKGNLGTIPAERTQRLIREELEVCGEAAGRYP 192
Query: 207 MNYRAWNHRCWLVSFMTREQV 227
NY AW+HR W++ + + V
Sbjct: 193 SNYNAWSHRIWVLQHLAKLDV 213
Score = 151 (58.2 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 29/75 (38%), Positives = 48/75 (64%)
Query: 188 QWIIERESELVEKIAERSKMNYRAWNHRCWLVSFMTREQV---LDELKKSRNWSGLHVAD 244
Q +I E E+ + A R NY AW+HR W++ + + V LDEL +++W+ +HV+D
Sbjct: 174 QRLIREELEVCGEAAGRYPSNYNAWSHRIWVLQHLAKLDVKILLDELSSTKHWASMHVSD 233
Query: 245 NSCFHYRRRLMLRNL 259
+S FHYR+ +L++L
Sbjct: 234 HSGFHYRQ-FLLKSL 247
Score = 82 (33.9 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 282 KEELDWNESLIKQYVGREALWLHRRFLSMYLIKHMA--THL 320
+EE++++ LI Y G E LW HRR + YL H++ TH+
Sbjct: 293 EEEVEFSTDLIDSYPGHETLWCHRRHV-FYLQHHLSAGTHV 332
>UNIPROTKB|F1SJD0 [details] [associations]
symbol:PTAR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0018342 "protein prenylation" evidence=IEA] [GO:0008318
"protein prenyltransferase activity" evidence=IEA]
InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147 GO:GO:0008318
GO:GO:0018342 GeneTree:ENSGT00390000017892 OMA:TRKQWLN
EMBL:CU463163 Ensembl:ENSSSCT00000005787 Uniprot:F1SJD0
Length = 430
Score = 182 (69.1 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 64/201 (31%), Positives = 95/201 (47%)
Query: 46 EEIGDSLSSEDRDHESTSFWIRDHKLGIST---QILIPVYKAAKHAFISALRQYKTPGNF 102
+EIG E R + S + ++KLG+ + + L+P H + L Y+T +
Sbjct: 30 DEIGLIPCPEARYNRSPIVLV-ENKLGVESWCVKFLLPYV----H---NKLLLYRTRKQW 81
Query: 103 SGKSQDDTLAIEVMIHSKALLLLSCDFATAWNSRKLIVSNKRLLPILMDELHLSALVLSY 162
K D L I+V LLLL+ DF TAWN RK ++ + L PI +LHL L L+
Sbjct: 82 LNK---DEL-IDVTC---TLLLLNPDFTTAWNVRKELILSGTLNPI--KDLHLGKLALTK 132
Query: 163 SPKSEQAWSHRRWVINMISRNCST----------------LQWIIERESELVEKIAERSK 206
PKS + W HRRWV+ + + S Q +I E E+ + A R
Sbjct: 133 FPKSPETWIHRRWVLRQLIQETSLPSFMTKGNLGIIPAERTQQLIREEMEVCGEAAGRYP 192
Query: 207 MNYRAWNHRCWLVSFMTREQV 227
NY AW+HR W++ + + V
Sbjct: 193 SNYNAWSHRIWVLQHLAKLDV 213
Score = 153 (58.9 bits), Expect = 7.5e-12, Sum P(2) = 7.5e-12
Identities = 29/75 (38%), Positives = 48/75 (64%)
Query: 188 QWIIERESELVEKIAERSKMNYRAWNHRCWLVSFMTREQV---LDELKKSRNWSGLHVAD 244
Q +I E E+ + A R NY AW+HR W++ + + V LDEL +++W+ +HV+D
Sbjct: 174 QQLIREEMEVCGEAAGRYPSNYNAWSHRIWVLQHLAKLDVKILLDELSSTKHWASMHVSD 233
Query: 245 NSCFHYRRRLMLRNL 259
+S FHYR+ +L++L
Sbjct: 234 HSGFHYRQ-FLLKSL 247
Score = 79 (32.9 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 282 KEELDWNESLIKQYVGREALWLHRRFLSMYLIKHM 316
+EE++++ LI Y G E LW HRR + YL H+
Sbjct: 293 EEEVEFSTDLIDSYPGHETLWCHRRHI-FYLQHHL 326
>UNIPROTKB|J9P4Q0 [details] [associations]
symbol:PTAR1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0018342 "protein prenylation" evidence=IEA]
[GO:0008318 "protein prenyltransferase activity" evidence=IEA]
InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147 GO:GO:0008318
GO:GO:0018342 GeneTree:ENSGT00390000017892 OMA:TRKQWLN
EMBL:AAEX03000572 Ensembl:ENSCAFT00000047524 Uniprot:J9P4Q0
Length = 429
Score = 181 (68.8 bits), Expect = 4.3e-15, Sum P(2) = 4.3e-15
Identities = 65/201 (32%), Positives = 97/201 (48%)
Query: 46 EEIGDSLSSEDRDHESTSFWIRDHKLGIST---QILIPVYKAAKHAFISALRQYKTPGNF 102
+EIG E R + S + ++KLG+ + + L+P H + L Y+T +
Sbjct: 30 DEIGLIPCPEARYNRSPIVLV-ENKLGVESWCVKFLLPYV----H---NKLLLYRTRKQW 81
Query: 103 SGKSQDDTLAIEVMIHSKALLLLSCDFATAWNSRKLIVSNKRLLPILMDELHLSALVLSY 162
K D L I+V LLLL+ DF TAWN RK ++ + L PI +L+L L L+
Sbjct: 82 LNK---DEL-IDVTC---TLLLLNPDFTTAWNVRKELILSGTLNPI--KDLYLGKLALTK 132
Query: 163 SPKSEQAWSHRRWVIN-----------MISRNCSTL-----QWIIERESELVEKIAERSK 206
PKS + W HRRWV+ M+ N T+ Q +I E E+ + A R
Sbjct: 133 FPKSPETWIHRRWVLQQLIQETSLPSFMMKGNLGTIPAERTQRLIREELEVCGEAAGRYP 192
Query: 207 MNYRAWNHRCWLVSFMTREQV 227
NY AW+HR W++ + + V
Sbjct: 193 SNYNAWSHRIWVLQHLAKLDV 213
Score = 151 (58.2 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 29/75 (38%), Positives = 48/75 (64%)
Query: 188 QWIIERESELVEKIAERSKMNYRAWNHRCWLVSFMTREQV---LDELKKSRNWSGLHVAD 244
Q +I E E+ + A R NY AW+HR W++ + + V LDEL +++W+ +HV+D
Sbjct: 174 QRLIREELEVCGEAAGRYPSNYNAWSHRIWVLQHLAKLDVKILLDELSSTKHWASMHVSD 233
Query: 245 NSCFHYRRRLMLRNL 259
+S FHYR+ +L++L
Sbjct: 234 HSGFHYRQ-FLLKSL 247
Score = 79 (32.9 bits), Expect = 4.3e-15, Sum P(2) = 4.3e-15
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 282 KEELDWNESLIKQYVGREALWLHRRFLSMYLIKHMA 317
+EE++++ LI Y G E LW HRR + YL H++
Sbjct: 293 EEEVEFSTDLIDSYPGHETLWCHRRHV-FYLQHHLS 327
>ZFIN|ZDB-GENE-060526-17 [details] [associations]
symbol:ptar1 "protein prenyltransferase alpha
subunit repeat containing 1" species:7955 "Danio rerio" [GO:0018342
"protein prenylation" evidence=IEA] [GO:0008318 "protein
prenyltransferase activity" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0004659 "prenyltransferase activity"
evidence=IEA] InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147
ZFIN:ZDB-GENE-060526-17 GO:GO:0008318 GO:GO:0018342 EMBL:BX470086
EMBL:BC124321 IPI:IPI00845030 RefSeq:NP_001123546.1
UniGene:Dr.149271 ProteinModelPortal:A3KPW7
Ensembl:ENSDART00000050983 GeneID:561820 KEGG:dre:561820 CTD:375743
eggNOG:NOG258936 GeneTree:ENSGT00390000017892 HOGENOM:HOG000115755
HOVERGEN:HBG108302 InParanoid:Q08CA2 KO:K14137 OrthoDB:EOG46WZ8F
NextBio:20884106 Bgee:A3KPW7 Uniprot:A3KPW7
Length = 426
Score = 174 (66.3 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 51/155 (32%), Positives = 75/155 (48%)
Query: 119 SKALLLLSCDFATAWNSRKLIVSNKRLLP---ILMDELHLSALVLSYSPKSEQAWSHRRW 175
+ LLLL+ DF TAWN RK ++ L P + + +L LS S + W +R
Sbjct: 91 TSTLLLLNPDFTTAWNVRKELLQCGVLNPEKDLYLGKLALSKHPKSPETWIHRRWVLQRL 150
Query: 176 VINMIS------------RNCSTLQWIIERESELVEKIAERSKMNYRAWNHRCWLVSFMT 223
R C LQ ++ E + + A R NY AW+HR W++ M
Sbjct: 151 QKECSPSGQELKDSAESRRQCERLQRALQEEMRVCAEAAGRYPSNYNAWSHRIWVLQNMA 210
Query: 224 RE--QVL-DELKKSRNWSGLHVADNSCFHYRRRLM 255
+ +VL DEL +R W +HV+D+S FHYR+ L+
Sbjct: 211 KGNLKVLHDELSSTRLWVSMHVSDHSGFHYRQHLL 245
Score = 82 (33.9 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 22/74 (29%), Positives = 33/74 (44%)
Query: 279 QIWKEELDWNESLIKQYVGREALWLHRRFLSMYLIKHMATHLLAVSCQSKPKASVDIDID 338
+++ EE+ LI+ Y G E LW HRR + + H+ QS D+
Sbjct: 286 RLFHEEIQLCTDLIESYPGHETLWCHRRHVFYLWHQWRREHMQGAGSQSPALTHTDV--- 342
Query: 339 SLMDHELCLVHSCS 352
L+ ELC +S S
Sbjct: 343 -LLSKELCDNNSIS 355
>UNIPROTKB|F1P1Q7 [details] [associations]
symbol:PTAR1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008318 "protein prenyltransferase activity"
evidence=IEA] [GO:0018342 "protein prenylation" evidence=IEA]
InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147 GO:GO:0008318
GO:GO:0018342 GeneTree:ENSGT00390000017892 EMBL:AADN02078226
EMBL:AADN02078227 IPI:IPI00821813 Ensembl:ENSGALT00000038218
ArrayExpress:F1P1Q7 Uniprot:F1P1Q7
Length = 216
Score = 173 (66.0 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 40/114 (35%), Positives = 60/114 (52%)
Query: 122 LLLLSCDFATAWNSRKLIVSNKRLLPILMDELHLSALVLSYSPKSEQAWSHRRWVIN-MI 180
LLLL+ DF TAWN RK ++ + L P+ +LHL L L+ PKS + W HRRWV+ +I
Sbjct: 95 LLLLNPDFTTAWNVRKELILSGTLSPL--KDLHLGKLALTKFPKSPETWIHRRWVLQQLI 152
Query: 181 SRNC---------------STLQWIIERESELVEKIAERSKMNYRAWNHRCWLV 219
N + +++ E ++ + A R NY AW+HR W++
Sbjct: 153 QENSLPVLVNKGNLGAAPVERIHRLVQEEMDVCSEAAGRYPSNYNAWSHRIWVL 206
>UNIPROTKB|F1N382 [details] [associations]
symbol:Bt.90693 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0018342 "protein prenylation" evidence=IEA] [GO:0008318
"protein prenyltransferase activity" evidence=IEA]
InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147 GO:GO:0008318
GO:GO:0018342 GeneTree:ENSGT00390000017892 OMA:TRKQWLN
EMBL:DAAA02022816 EMBL:DAAA02022817 IPI:IPI01002214
Ensembl:ENSBTAT00000007663 Uniprot:F1N382
Length = 432
Score = 187 (70.9 bits), Expect = 9.4e-12, P = 9.4e-12
Identities = 64/200 (32%), Positives = 96/200 (48%)
Query: 44 LKEEIGDSLSSEDRDHESTSFWIRDHKLGIST---QILIPVYKAAKHAFISALRQYKTPG 100
L++EIG E R + S + ++KLG+ + + L+P H + L Y+T
Sbjct: 30 LRDEIGLIPCPEARYNRSPIVLV-ENKLGVESWCVKFLLPYV----H---NKLLLYRTRK 81
Query: 101 NFSGKSQDDTLAIEVMIHSKALLLLSCDFATAWNSRKLIVSNKRLLPILMDELHLSALVL 160
+ K D L I+V LLLL+ DF TAWN RK ++ + L PI +LHL L L
Sbjct: 82 QWLNK---DEL-IDVTC---TLLLLNPDFTTAWNVRKELILSGTLNPI--KDLHLGKLAL 132
Query: 161 SYSPKSEQAWSHRRWVINMISRNCST----------------LQWIIERESELVEKIAER 204
+ PKS + W HRRWV+ + + S Q +I E E+ + A R
Sbjct: 133 TKFPKSPETWIHRRWVLQQLIQETSLPSFMTKGNLGIIPAERTQQLIREEMEVCGEAAGR 192
Query: 205 SKMNYRAWNHRCWLVSFMTR 224
NY AW+HR W++ + +
Sbjct: 193 YPSNYNAWSHRIWVLQHLAK 212
Score = 151 (58.2 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 28/75 (37%), Positives = 49/75 (65%)
Query: 188 QWIIERESELVEKIAERSKMNYRAWNHRCWLVSFMTR---EQVLDELKKSRNWSGLHVAD 244
Q +I E E+ + A R NY AW+HR W++ + + + +LDEL +++W+ +HV+D
Sbjct: 176 QQLIREEMEVCGEAAGRYPSNYNAWSHRIWVLQHLAKLDTKILLDELSSTKHWASMHVSD 235
Query: 245 NSCFHYRRRLMLRNL 259
+S FHYR+ +L++L
Sbjct: 236 HSGFHYRQ-FLLKSL 249
>UNIPROTKB|G5E608 [details] [associations]
symbol:Bt.90693 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0018342 "protein prenylation" evidence=IEA] [GO:0008318
"protein prenyltransferase activity" evidence=IEA]
InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147 GO:GO:0008318
GO:GO:0018342 GeneTree:ENSGT00390000017892 EMBL:DAAA02022816
EMBL:DAAA02022817 Ensembl:ENSBTAT00000049249 Uniprot:G5E608
Length = 432
Score = 187 (70.9 bits), Expect = 9.4e-12, P = 9.4e-12
Identities = 64/200 (32%), Positives = 96/200 (48%)
Query: 44 LKEEIGDSLSSEDRDHESTSFWIRDHKLGIST---QILIPVYKAAKHAFISALRQYKTPG 100
L++EIG E R + S + ++KLG+ + + L+P H + L Y+T
Sbjct: 30 LRDEIGLIPCPEARYNRSPIVLV-ENKLGVESWCVKFLLPYV----H---NKLLLYRTRK 81
Query: 101 NFSGKSQDDTLAIEVMIHSKALLLLSCDFATAWNSRKLIVSNKRLLPILMDELHLSALVL 160
+ K D L I+V LLLL+ DF TAWN RK ++ + L PI +LHL L L
Sbjct: 82 QWLNK---DEL-IDVTC---TLLLLNPDFTTAWNVRKELILSGTLNPI--KDLHLGKLAL 132
Query: 161 SYSPKSEQAWSHRRWVINMISRNCST----------------LQWIIERESELVEKIAER 204
+ PKS + W HRRWV+ + + S Q +I E E+ + A R
Sbjct: 133 TKFPKSPETWIHRRWVLQQLIQETSLPSFMTKGNLGIIPAERTQQLIREEMEVCGEAAGR 192
Query: 205 SKMNYRAWNHRCWLVSFMTR 224
NY AW+HR W++ + +
Sbjct: 193 YPSNYNAWSHRIWVLQHLAK 212
Score = 151 (58.2 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 28/75 (37%), Positives = 49/75 (65%)
Query: 188 QWIIERESELVEKIAERSKMNYRAWNHRCWLVSFMTR---EQVLDELKKSRNWSGLHVAD 244
Q +I E E+ + A R NY AW+HR W++ + + + +LDEL +++W+ +HV+D
Sbjct: 176 QQLIREEMEVCGEAAGRYPSNYNAWSHRIWVLQHLAKLDTKILLDELSSTKHWASMHVSD 235
Query: 245 NSCFHYRRRLMLRNL 259
+S FHYR+ +L++L
Sbjct: 236 HSGFHYRQ-FLLKSL 249
>UNIPROTKB|F1NK31 [details] [associations]
symbol:PTAR1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008318 "protein prenyltransferase activity"
evidence=IEA] [GO:0018342 "protein prenylation" evidence=IEA]
InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147 GO:GO:0008318
GO:GO:0018342 GeneTree:ENSGT00390000017892 OMA:TRKQWLN
EMBL:AADN02078226 EMBL:AADN02078227 IPI:IPI00587842
Ensembl:ENSGALT00000024385 ArrayExpress:F1NK31 Uniprot:F1NK31
Length = 384
Score = 173 (66.0 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 40/114 (35%), Positives = 60/114 (52%)
Query: 122 LLLLSCDFATAWNSRKLIVSNKRLLPILMDELHLSALVLSYSPKSEQAWSHRRWVIN-MI 180
LLLL+ DF TAWN RK ++ + L P+ +LHL L L+ PKS + W HRRWV+ +I
Sbjct: 65 LLLLNPDFTTAWNVRKELILSGTLSPL--KDLHLGKLALTKFPKSPETWIHRRWVLQQLI 122
Query: 181 SRNC---------------STLQWIIERESELVEKIAERSKMNYRAWNHRCWLV 219
N + +++ E ++ + A R NY AW+HR W++
Sbjct: 123 QENSLPVLVNKGNLGAAPVERIHRLVQEEMDVCSEAAGRYPSNYNAWSHRIWVL 176
Score = 153 (58.9 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 30/82 (36%), Positives = 50/82 (60%)
Query: 190 IIERESELVEKIAERSKMNYRAWNHRCWL---VSFMTREQVLDELKKSRNWSGLHVADNS 246
+++ E ++ + A R NY AW+HR W+ V +T + +LDEL ++ W +HV+D+S
Sbjct: 147 LVQEEMDVCSEAAGRYPSNYNAWSHRIWVLQNVGKLTIKILLDELSSTKYWVSMHVSDHS 206
Query: 247 CFHYRRRLMLRNLEGFCYTQDN 268
FHYR+ +L++L G DN
Sbjct: 207 GFHYRQ-FLLKSLIGRTVNDDN 227
>TAIR|locus:2121860 [details] [associations]
symbol:RGTA1 "RAB geranylgeranyl transferase alpha
subunit 1" species:3702 "Arabidopsis thaliana" [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008318 "protein prenyltransferase
activity" evidence=IEA] [GO:0018342 "protein prenylation"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEP]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR001611
InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147 PROSITE:PS51450
GO:GO:0005829 GO:GO:0046686 EMBL:CP002687 GO:GO:0008318
GO:GO:0018342 KO:K14050 HSSP:Q08602 EMBL:AY072209 EMBL:AY117358
IPI:IPI00528243 RefSeq:NP_001078443.1 RefSeq:NP_194180.2
UniGene:At.28080 ProteinModelPortal:Q8VYB7 SMR:Q8VYB7 PRIDE:Q8VYB7
EnsemblPlants:AT4G24490.1 EnsemblPlants:AT4G24490.2 GeneID:828551
KEGG:ath:AT4G24490 TAIR:At4g24490 HOGENOM:HOG000030513
InParanoid:Q8VYB7 OMA:KLAFQHN PhylomeDB:Q8VYB7
ProtClustDB:CLSN2686399 Genevestigator:Q8VYB7 Uniprot:Q8VYB7
Length = 678
Score = 161 (61.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 58/196 (29%), Positives = 93/196 (47%)
Query: 80 PVYKAAKHAFISALRQYKTPGNFSGKSQDDTLAIEVMIHSKALLLLSCDFATAWNSRKLI 139
P +AA A LR ++ F D E + S LL ++ + TAWN RKL
Sbjct: 11 PEEEAASAAKAVQLRSLQS--QFMTNHHDKIYTNEAIELSTKLLEINPEAYTAWNYRKLA 68
Query: 140 VSNK--RLLP-------ILMDELHLSALVLSYSPKSEQAWSHRRWVINMISRNCSTLQWI 190
V ++ R+ P IL +EL + L + KS AW HR+WV+ S+ S+
Sbjct: 69 VEDRLARIEPDPNLVSAILDEELRVVESALRQNFKSYGAWHHRKWVL---SKGHSS---- 121
Query: 191 IERESELVEKIAERSKMNYRAWNHRCWLVSFMTREQVLDELKKSRNWSGLHVADNSCFHY 250
+ E L+EK + N+ AWN+R ++V R + DEL+ + + + ++ S +H
Sbjct: 122 VGNELRLLEKFQKLDSRNFHAWNYRRFVVELTNRSEQ-DELQYTDDMINNNFSNYSAWHN 180
Query: 251 RR----RLMLRNLEGF 262
R L+ +N +GF
Sbjct: 181 RSVLLSSLLAQNADGF 196
>DICTYBASE|DDB_G0269570 [details] [associations]
symbol:rabggta "protein geranylgeranyltransferase
type II" species:44689 "Dictyostelium discoideum" [GO:0018342
"protein prenylation" evidence=IEA] [GO:0008318 "protein
prenyltransferase activity" evidence=IEA] [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA;ISS] [GO:0018344
"protein geranylgeranylation" evidence=ISS] [GO:0005968
"Rab-protein geranylgeranyltransferase complex" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0004659 "prenyltransferase
activity" evidence=IEA] InterPro:IPR002088 Pfam:PF01239
PROSITE:PS51147 dictyBase:DDB_G0269570 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0046872 eggNOG:COG5536
GO:GO:0018344 GO:GO:0004663 KO:K14050 RefSeq:XP_646077.2
HSSP:Q08602 ProteinModelPortal:Q55DQ4 STRING:Q55DQ4
EnsemblProtists:DDB0233950 GeneID:8617027 KEGG:ddi:DDB_G0269570
OMA:FPKCYWI ProtClustDB:CLSZ2501688 GO:GO:0005968 Uniprot:Q55DQ4
Length = 311
Score = 130 (50.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 40/154 (25%), Positives = 71/154 (46%)
Query: 109 DTLAIEVMIHSKALLLLSCDFATAWNSRKLIV-------SNKRLLPILMDELHLSALVLS 161
D +++ V SK +L+ + +F T WN R+L + N L I +E+ +
Sbjct: 47 DEISLSV---SKLVLIENPEFYTIWNYRRLAILQFTETKENSELQVIYQNEMKFLEECIQ 103
Query: 162 YSPKSEQAWSHRRWVINMISRNCSTLQWIIERESELVEKIAERSKMNYRAWNHRCWLVSF 221
KS W HR+W+ + NC W ERE +L K+ N+ W HR +++
Sbjct: 104 RFTKSYWIWFHRQWIALRMD-NCD---W--EREMKLCTKLLNFDLRNFHCWGHRRFILKH 157
Query: 222 MTREQVLDELKKSRNWSGLHVADNSCFHYRRRLM 255
+ ++ DELK + + ++ S +H R ++
Sbjct: 158 -SNIKLEDELKYTTEKVEQNFSNYSAWHQRSSIL 190
>UNIPROTKB|H0YE66 [details] [associations]
symbol:H0YE66 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0008318 "protein prenyltransferase activity"
evidence=IEA] [GO:0018342 "protein prenylation" evidence=IEA]
InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147 GO:GO:0008318
GO:GO:0018342 EMBL:AC110275 EMBL:AC113191 Ensembl:ENST00000534420
OMA:PEWNDIS Uniprot:H0YE66
Length = 207
Score = 122 (48.0 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 37/136 (27%), Positives = 67/136 (49%)
Query: 131 TAWNSRKLIVSNKRLLPILMDELHLSALVLSYSPKSEQAWSHRRWVINMISRNCSTLQWI 190
T W+ R++++ K L L +E++ ++ PK+ Q W HRR ++ + R+ S
Sbjct: 89 TVWHFRRVLL--KSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWL-RDPS----- 140
Query: 191 IERESELVEKIAERSKMNYRAWNHRCWLVS-FMTRE---QVLDELKKSRNWSGLHVADNS 246
+E E + I + NY AW HR W++ F + Q +D+L K V +NS
Sbjct: 141 --QELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKE------DVRNNS 192
Query: 247 CFHYRRRLMLRNLEGF 262
++ +R ++ N G+
Sbjct: 193 VWN-QRYFVISNTTGY 207
>ZFIN|ZDB-GENE-030131-866 [details] [associations]
symbol:fnta "farnesyltransferase, CAAX box, alpha"
species:7955 "Danio rerio" [GO:0018342 "protein prenylation"
evidence=IEA] [GO:0008318 "protein prenyltransferase activity"
evidence=IEA] InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147
ZFIN:ZDB-GENE-030131-866 HOGENOM:HOG000188957 KO:K05955
GO:GO:0008318 CTD:2339 HOVERGEN:HBG004498 GO:GO:0018342
GeneTree:ENSGT00550000074935 EMBL:CABZ01069944 EMBL:CABZ01069945
EMBL:BC129222 IPI:IPI00769353 RefSeq:NP_001074029.1
UniGene:Dr.36981 SMR:A1L1V1 Ensembl:ENSDART00000054861
GeneID:555882 KEGG:dre:555882 InParanoid:A1L1V1 NextBio:20881212
Uniprot:A1L1V1
Length = 374
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 36/145 (24%), Positives = 72/145 (49%)
Query: 119 SKALLLLSCDFATAWNSRKLIVSNKRLLPILMDELHLSALVLSYSPKSEQAWSHRRWVIN 178
++A+ L + ++ T W+ R++++ + L L +E++ ++ PK+ Q W HRR V+
Sbjct: 99 AEAIDLNAANY-TVWHYRRVLL--QALKKDLREEMNYITAIIEDQPKNYQVWHHRRMVVE 155
Query: 179 MISRNCSTLQWIIERESELVEKIAERSKMNYRAWNHRCWLVSFMTREQVLD-ELKKSRNW 237
+S LQ++ E I + NY AW HR W++ ++ D EL+
Sbjct: 156 WLSDPADELQFVAE--------ILSQDAKNYHAWQHRQWVIQ---EYKLWDGELEYVEEL 204
Query: 238 SGLHVADNSCFHYRRRLMLRNLEGF 262
V +NS ++ +R ++ + G+
Sbjct: 205 LEEDVRNNSAWN-QRHFVISHTSGY 228
>UNIPROTKB|E9PQP6 [details] [associations]
symbol:FNTA "Protein
farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha"
species:9606 "Homo sapiens" [GO:0008318 "protein prenyltransferase
activity" evidence=IEA] [GO:0018342 "protein prenylation"
evidence=IEA] InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147
GO:GO:0008318 GO:GO:0018342 EMBL:AC110275 EMBL:AC113191
HGNC:HGNC:3782 IPI:IPI00976845 ProteinModelPortal:E9PQP6 SMR:E9PQP6
Ensembl:ENST00000533336 ArrayExpress:E9PQP6 Bgee:E9PQP6
Uniprot:E9PQP6
Length = 249
Score = 122 (48.0 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 37/136 (27%), Positives = 67/136 (49%)
Query: 131 TAWNSRKLIVSNKRLLPILMDELHLSALVLSYSPKSEQAWSHRRWVINMISRNCSTLQWI 190
T W+ R++++ K L L +E++ ++ PK+ Q W HRR ++ + R+ S
Sbjct: 70 TVWHFRRVLL--KSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWL-RDPS----- 121
Query: 191 IERESELVEKIAERSKMNYRAWNHRCWLVS-FMTRE---QVLDELKKSRNWSGLHVADNS 246
+E E + I + NY AW HR W++ F + Q +D+L K V +NS
Sbjct: 122 --QELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKE------DVRNNS 173
Query: 247 CFHYRRRLMLRNLEGF 262
++ +R ++ N G+
Sbjct: 174 VWN-QRYFVISNTTGY 188
>TAIR|locus:2081177 [details] [associations]
symbol:FTA "farnesyltransferase A" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008318 "protein prenyltransferase activity" evidence=IEA;IDA]
[GO:0018342 "protein prenylation" evidence=IEA;IDA] [GO:0004311
"farnesyltranstransferase activity" evidence=TAS] [GO:0005953
"CAAX-protein geranylgeranyltransferase complex" evidence=IPI]
[GO:0018343 "protein farnesylation" evidence=TAS] [GO:0018344
"protein geranylgeranylation" evidence=IDA] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0008360 "regulation
of cell shape" evidence=IMP] [GO:0009788 "negative regulation of
abscisic acid mediated signaling pathway" evidence=IMP] [GO:0048509
"regulation of meristem development" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0005965 "protein
farnesyltransferase complex" evidence=IPI] [GO:0009414 "response to
water deprivation" evidence=IMP] InterPro:IPR002088 Pfam:PF01239
PROSITE:PS51147 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0008360 GO:GO:0009414 GO:GO:0009788 EMBL:AL356014
GO:GO:0048509 GO:GO:0018343 GO:GO:0004311 EMBL:AF064542
IPI:IPI00538297 PIR:T49006 PIR:T51811 RefSeq:NP_567084.1
UniGene:At.1520 ProteinModelPortal:Q9LX33 SMR:Q9LX33 IntAct:Q9LX33
STRING:Q9LX33 PaxDb:Q9LX33 PRIDE:Q9LX33 EnsemblPlants:AT3G59380.1
GeneID:825107 KEGG:ath:AT3G59380 TAIR:At3g59380 eggNOG:COG5536
HOGENOM:HOG000188957 InParanoid:Q9LX33 KO:K05955 OMA:FNNSAWN
BioCyc:MetaCyc:AT3G59380-MONOMER Genevestigator:Q9LX33
GermOnline:AT3G59380 GO:GO:0005953 GO:GO:0005965 GO:GO:0004662
GO:GO:0004660 GO:GO:0008318 GO:GO:0018344 Uniprot:Q9LX33
Length = 326
Score = 124 (48.7 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 35/129 (27%), Positives = 58/129 (44%)
Query: 123 LLLSCDFATAWNSRKLIVSNKRLLPILMDELHLSALVLSYSPKSEQAWSHRRWVINMISR 182
LLL+ T W+ R+L++ + L L +EL + + K+ Q W HRRWV +
Sbjct: 67 LLLNSGNYTVWHFRRLVL--EALNHDLFEELEFIERIAEDNSKNYQLWHHRRWVAEKLGP 124
Query: 183 NCSTLQWIIERESELVEKIAERSKMNYRAWNHRCWLVSFMTREQVLDELKKSRNWSGLHV 242
+ + RE E ++ +Y AW+HR W + + + DEL V
Sbjct: 125 D------VAGRELEFTRRVLSLDAKHYHAWSHRQWTLRALGGWE--DELDYCHELLEADV 176
Query: 243 ADNSCFHYR 251
+NS ++ R
Sbjct: 177 FNNSAWNQR 185
>DICTYBASE|DDB_G0283053 [details] [associations]
symbol:fntA "protein prenyltransferase alpha subunit"
species:44689 "Dictyostelium discoideum" [GO:0018342 "protein
prenylation" evidence=IEA] [GO:0008318 "protein prenyltransferase
activity" evidence=IEA] [GO:0004662 "CAAX-protein
geranylgeranyltransferase activity" evidence=IEA] [GO:0004660
"protein farnesyltransferase activity" evidence=IEA;ISS]
[GO:0018343 "protein farnesylation" evidence=ISS] [GO:0005965
"protein farnesyltransferase complex" evidence=ISS] [GO:0016740
"transferase activity" evidence=IEA] [GO:0004659 "prenyltransferase
activity" evidence=IEA] InterPro:IPR002088 Pfam:PF01239
PROSITE:PS51147 dictyBase:DDB_G0283053 GenomeReviews:CM000153_GR
EMBL:AAFI02000049 GO:GO:0018343 eggNOG:COG5536 KO:K05955
GO:GO:0005965 GO:GO:0004662 GO:GO:0004660 RefSeq:XP_639262.1
HSSP:P49354 ProteinModelPortal:Q54RT9 STRING:Q54RT9
EnsemblProtists:DDB0237551 GeneID:8623832 KEGG:ddi:DDB_G0283053
OMA:HRRFIVE ProtClustDB:CLSZ2728981 Uniprot:Q54RT9
Length = 322
Score = 110 (43.8 bits), Expect = 6.8e-05, Sum P(3) = 6.8e-05
Identities = 29/114 (25%), Positives = 57/114 (50%)
Query: 136 RKLIVSNKRLLPILMDELHLSALVLSYSPKSEQAWSHRRWVINMISRNCSTLQWIIERES 195
R ++ S ++ L +L L V+ +P + W +RR V+ I ++ T+++ I++E
Sbjct: 51 RAILKSKEKSLRVL----DLLEEVIQENPSNYTIWYYRREVLKAIEQD-ETIEYDIQQEM 105
Query: 196 ELVEKIAERSKMNYRAWNHRCWLVSFMTREQVLDELKKSRNWSGLHVADNSCFH 249
L+ + E NY+ WNHR F+ + + + K+ SG+ + D +H
Sbjct: 106 NLLNDMGETDPKNYQIWNHR----RFIVEKYIGSDNKEKEFLSGVLLEDAKNYH 155
Score = 51 (23.0 bits), Expect = 6.8e-05, Sum P(3) = 6.8e-05
Identities = 10/36 (27%), Positives = 19/36 (52%)
Query: 273 YFVETYQIWKEELDWNESLIKQYVGREALWLHRRFL 308
+ ++TY+ W EL + L+ ++W HR F+
Sbjct: 162 WLLKTYRDWNGELAMVDKLLSLDHRNNSVWNHRFFV 197
Score = 41 (19.5 bits), Expect = 0.00065, Sum P(3) = 0.00065
Identities = 9/32 (28%), Positives = 19/32 (59%)
Query: 361 EEAQAIHSAAYMLWLTKQIPEYQG-IDIQEKL 391
E+A+ H+ ++ WL K ++ G + + +KL
Sbjct: 149 EDAKNYHAWSHRQWLLKTYRDWNGELAMVDKL 180
Score = 38 (18.4 bits), Expect = 6.8e-05, Sum P(3) = 6.8e-05
Identities = 7/15 (46%), Positives = 8/15 (53%)
Query: 404 RSCPDRSSLWDYLVG 418
R P+ S W YL G
Sbjct: 223 RHSPNNESPWSYLKG 237
>ZFIN|ZDB-GENE-060929-1042 [details] [associations]
symbol:rabggta "Rab geranylgeranyltransferase,
alpha subunit" species:7955 "Danio rerio" [GO:0018342 "protein
prenylation" evidence=IEA] [GO:0008318 "protein prenyltransferase
activity" evidence=IEA] [GO:0004663 "Rab geranylgeranyltransferase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR002088
InterPro:IPR009087 Pfam:PF01239 Pfam:PF07711 ProDom:PD331837
PROSITE:PS51147 PROSITE:PS51450 ZFIN:ZDB-GENE-060929-1042
GO:GO:0008270 InterPro:IPR025875 Pfam:PF12799 eggNOG:COG5536
GO:GO:0018342 GO:GO:0004663 CTD:5875 HOGENOM:HOG000007845
HOVERGEN:HBG002171 KO:K14050 OrthoDB:EOG4FXR7F Gene3D:2.60.40.1130
SUPFAM:SSF49594 EMBL:BC124249 IPI:IPI01024172 RefSeq:NP_001070131.1
UniGene:Dr.138610 ProteinModelPortal:Q08CG5 SMR:Q08CG5 PRIDE:Q08CG5
GeneID:767725 KEGG:dre:767725 InParanoid:Q08CG5 NextBio:20918111
Bgee:Q08CG5 Uniprot:Q08CG5
Length = 580
Score = 127 (49.8 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 40/149 (26%), Positives = 67/149 (44%)
Query: 114 EVMIHSKALLLLSCDFATAWNSRKLIVSNKRLL-------PILMDELHLSALVLSYSPKS 166
E + ++ LL + DFAT WN R+ ++ + L + ELH L +PKS
Sbjct: 47 EALDLTQQLLSSNPDFATLWNYRREVLLHLETLREKDEVQKLYESELHFIEACLKVNPKS 106
Query: 167 EQAWSHRRWVINMISRNCSTLQWIIERESELVEKIAERSKMNYRAWNHRCWLVSFMTREQ 226
W HR WV + + W RE L ++ + N+ W++R +V +
Sbjct: 107 YGCWHHRSWVNTRLPQP----DWT--RELGLCDRCLSLDERNFHCWDYRRLVVK-ESGVS 159
Query: 227 VLDELKKSRNWSGLHVADNSCFHYRRRLM 255
V EL+ + G + ++ S +HYR L+
Sbjct: 160 VEQELQFTDRLIGSNFSNYSSWHYRSTLL 188
>RGD|2625 [details] [associations]
symbol:Fnta "farnesyltransferase, CAAX box, alpha" species:10116
"Rattus norvegicus" [GO:0004660 "protein farnesyltransferase
activity" evidence=IEA;ISO;IDA] [GO:0004662 "CAAX-protein
geranylgeranyltransferase activity" evidence=IEA;IDA] [GO:0004663
"Rab geranylgeranyltransferase activity" evidence=IEA;ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005875 "microtubule associated complex"
evidence=IEA;ISO] [GO:0005953 "CAAX-protein geranylgeranyltransferase
complex" evidence=IDA] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0010035 "response to inorganic
substance" evidence=IMP] [GO:0010469 "regulation of receptor
activity" evidence=ISO] [GO:0014070 "response to organic cyclic
compound" evidence=IMP] [GO:0018342 "protein prenylation"
evidence=IEA] [GO:0018343 "protein farnesylation" evidence=IEA;ISO]
[GO:0030548 "acetylcholine receptor regulator activity"
evidence=IEA;ISO] [GO:0030971 "receptor tyrosine kinase binding"
evidence=IEA;ISO] [GO:0034097 "response to cytokine stimulus"
evidence=IMP] [GO:0043014 "alpha-tubulin binding" evidence=IEA;ISO]
[GO:0043066 "negative regulation of apoptotic process" evidence=IMP]
[GO:0045213 "neurotransmitter receptor metabolic process"
evidence=IEA;ISO] [GO:0045787 "positive regulation of cell cycle"
evidence=IMP] [GO:0051770 "positive regulation of nitric-oxide
synthase biosynthetic process" evidence=IMP] [GO:0051771 "negative
regulation of nitric-oxide synthase biosynthetic process"
evidence=IMP] [GO:0090044 "positive regulation of tubulin
deacetylation" evidence=IEA;ISO] [GO:0090045 "positive regulation of
deacetylase activity" evidence=IEA;ISO] [GO:0008144 "drug binding"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0019840 "isoprenoid binding" evidence=IDA] [GO:0042277 "peptide
binding" evidence=IDA] InterPro:IPR002088 Pfam:PF01239
PROSITE:PS51147 RGD:2625 GO:GO:0005737 GO:GO:0043066 GO:GO:0008284
GO:GO:0034097 GO:GO:0014070 GO:GO:0010035 GO:GO:0030548 GO:GO:0045213
GO:GO:0045787 GO:GO:0051770 GO:GO:0071340 GO:GO:0051771
eggNOG:COG5536 HOGENOM:HOG000188957 KO:K05955 GO:GO:0005953
GO:GO:0004662 GO:GO:0004660 CTD:2339 HOVERGEN:HBG004498
OrthoDB:EOG46DM39 GO:GO:0018342 GO:GO:0004663 EMBL:M81225
IPI:IPI00188070 PIR:A41625 RefSeq:NP_036979.1 UniGene:Rn.5990
PDB:1D8D PDB:1D8E PDB:1FPP PDB:1FT1 PDB:1FT2 PDB:1FTI PDB:1HZ7
PDB:1JCR PDB:1JCS PDB:1KZO PDB:1KZP PDB:1KZR PDB:1N4P PDB:1N4Q
PDB:1N4R PDB:1N4S PDB:1N94 PDB:1N95 PDB:1N9A PDB:1NI1 PDB:1NL4
PDB:1O1R PDB:1O1S PDB:1O1T PDB:1O5M PDB:1QBQ PDB:1QE2 PDB:1S64
PDB:1SA5 PDB:1TN7 PDB:1TN8 PDB:1TNB PDB:1TNO PDB:1TNU PDB:1TNY
PDB:1TNZ PDB:1X81 PDB:2BED PDB:2FTI PDB:2R2L PDB:2ZIR PDB:2ZIS
PDB:3DPY PDB:3E30 PDB:3E32 PDB:3E33 PDB:3E34 PDB:3EU5 PDB:3EUV
PDB:3FTI PDB:3KSL PDB:3KSQ PDB:4GTM PDB:4GTO PDB:4GTP PDB:4GTQ
PDB:4GTR PDBsum:1D8D PDBsum:1D8E PDBsum:1FPP PDBsum:1FT1 PDBsum:1FT2
PDBsum:1FTI PDBsum:1HZ7 PDBsum:1JCR PDBsum:1JCS PDBsum:1KZO
PDBsum:1KZP PDBsum:1KZR PDBsum:1N4P PDBsum:1N4Q PDBsum:1N4R
PDBsum:1N4S PDBsum:1N94 PDBsum:1N95 PDBsum:1N9A PDBsum:1NI1
PDBsum:1NL4 PDBsum:1O1R PDBsum:1O1S PDBsum:1O1T PDBsum:1O5M
PDBsum:1QBQ PDBsum:1QE2 PDBsum:1S64 PDBsum:1SA5 PDBsum:1TN7
PDBsum:1TN8 PDBsum:1TNB PDBsum:1TNO PDBsum:1TNU PDBsum:1TNY
PDBsum:1TNZ PDBsum:1X81 PDBsum:2BED PDBsum:2FTI PDBsum:2R2L
PDBsum:2ZIR PDBsum:2ZIS PDBsum:3DPY PDBsum:3E30 PDBsum:3E32
PDBsum:3E33 PDBsum:3E34 PDBsum:3EU5 PDBsum:3EUV PDBsum:3FTI
PDBsum:3KSL PDBsum:3KSQ PDBsum:4GTM PDBsum:4GTO PDBsum:4GTP
PDBsum:4GTQ PDBsum:4GTR ProteinModelPortal:Q04631 SMR:Q04631
DIP:DIP-6131N IntAct:Q04631 MINT:MINT-121907 STRING:Q04631
PhosphoSite:Q04631 PRIDE:Q04631 GeneID:25318 KEGG:rno:25318
UCSC:RGD:2625 InParanoid:Q04631 SABIO-RK:Q04631 BindingDB:Q04631
ChEMBL:CHEMBL4432 EvolutionaryTrace:Q04631 NextBio:606153
ArrayExpress:Q04631 Genevestigator:Q04631
GermOnline:ENSRNOG00000014462 Uniprot:Q04631
Length = 377
Score = 123 (48.4 bits), Expect = 0.00010, P = 0.00010
Identities = 37/142 (26%), Positives = 69/142 (48%)
Query: 131 TAWNSRKLIVSNKRLLPILMDELHLSALVLSYSPKSEQAWSHRRWVINMISRNCSTLQWI 190
T W+ R++++ + L L +E++ ++ PK+ Q W HRR ++ +W+
Sbjct: 132 TVWHFRRVLL--RSLQKDLQEEMNYIIAIIEEQPKNYQVWHHRRVLV----------EWL 179
Query: 191 IE--RESELVEKIAERSKMNYRAWNHRCWLVS-FMTRE---QVLDELKKS--RN---WSG 239
+ +E E + I + NY AW HR W++ F + Q +D+L K RN W+
Sbjct: 180 KDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFRLWDNELQYVDQLLKEDVRNNSVWNQ 239
Query: 240 LH-VADNSCFHYRRRLMLRNLE 260
H V N+ + R ++ R ++
Sbjct: 240 RHFVISNTTGYSDRAVLEREVQ 261
>UNIPROTKB|Q04631 [details] [associations]
symbol:Fnta "Protein
farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147
RGD:2625 GO:GO:0005737 GO:GO:0043066 GO:GO:0008284 GO:GO:0034097
GO:GO:0014070 GO:GO:0010035 GO:GO:0030548 GO:GO:0045213
GO:GO:0045787 GO:GO:0051770 GO:GO:0071340 GO:GO:0051771
eggNOG:COG5536 HOGENOM:HOG000188957 KO:K05955 GO:GO:0005953
GO:GO:0004662 GO:GO:0004660 CTD:2339 HOVERGEN:HBG004498
OrthoDB:EOG46DM39 GO:GO:0018342 GO:GO:0004663 EMBL:M81225
IPI:IPI00188070 PIR:A41625 RefSeq:NP_036979.1 UniGene:Rn.5990
PDB:1D8D PDB:1D8E PDB:1FPP PDB:1FT1 PDB:1FT2 PDB:1FTI PDB:1HZ7
PDB:1JCR PDB:1JCS PDB:1KZO PDB:1KZP PDB:1KZR PDB:1N4P PDB:1N4Q
PDB:1N4R PDB:1N4S PDB:1N94 PDB:1N95 PDB:1N9A PDB:1NI1 PDB:1NL4
PDB:1O1R PDB:1O1S PDB:1O1T PDB:1O5M PDB:1QBQ PDB:1QE2 PDB:1S64
PDB:1SA5 PDB:1TN7 PDB:1TN8 PDB:1TNB PDB:1TNO PDB:1TNU PDB:1TNY
PDB:1TNZ PDB:1X81 PDB:2BED PDB:2FTI PDB:2R2L PDB:2ZIR PDB:2ZIS
PDB:3DPY PDB:3E30 PDB:3E32 PDB:3E33 PDB:3E34 PDB:3EU5 PDB:3EUV
PDB:3FTI PDB:3KSL PDB:3KSQ PDB:4GTM PDB:4GTO PDB:4GTP PDB:4GTQ
PDB:4GTR PDBsum:1D8D PDBsum:1D8E PDBsum:1FPP PDBsum:1FT1
PDBsum:1FT2 PDBsum:1FTI PDBsum:1HZ7 PDBsum:1JCR PDBsum:1JCS
PDBsum:1KZO PDBsum:1KZP PDBsum:1KZR PDBsum:1N4P PDBsum:1N4Q
PDBsum:1N4R PDBsum:1N4S PDBsum:1N94 PDBsum:1N95 PDBsum:1N9A
PDBsum:1NI1 PDBsum:1NL4 PDBsum:1O1R PDBsum:1O1S PDBsum:1O1T
PDBsum:1O5M PDBsum:1QBQ PDBsum:1QE2 PDBsum:1S64 PDBsum:1SA5
PDBsum:1TN7 PDBsum:1TN8 PDBsum:1TNB PDBsum:1TNO PDBsum:1TNU
PDBsum:1TNY PDBsum:1TNZ PDBsum:1X81 PDBsum:2BED PDBsum:2FTI
PDBsum:2R2L PDBsum:2ZIR PDBsum:2ZIS PDBsum:3DPY PDBsum:3E30
PDBsum:3E32 PDBsum:3E33 PDBsum:3E34 PDBsum:3EU5 PDBsum:3EUV
PDBsum:3FTI PDBsum:3KSL PDBsum:3KSQ PDBsum:4GTM PDBsum:4GTO
PDBsum:4GTP PDBsum:4GTQ PDBsum:4GTR ProteinModelPortal:Q04631
SMR:Q04631 DIP:DIP-6131N IntAct:Q04631 MINT:MINT-121907
STRING:Q04631 PhosphoSite:Q04631 PRIDE:Q04631 GeneID:25318
KEGG:rno:25318 UCSC:RGD:2625 InParanoid:Q04631 SABIO-RK:Q04631
BindingDB:Q04631 ChEMBL:CHEMBL4432 EvolutionaryTrace:Q04631
NextBio:606153 ArrayExpress:Q04631 Genevestigator:Q04631
GermOnline:ENSRNOG00000014462 Uniprot:Q04631
Length = 377
Score = 123 (48.4 bits), Expect = 0.00010, P = 0.00010
Identities = 37/142 (26%), Positives = 69/142 (48%)
Query: 131 TAWNSRKLIVSNKRLLPILMDELHLSALVLSYSPKSEQAWSHRRWVINMISRNCSTLQWI 190
T W+ R++++ + L L +E++ ++ PK+ Q W HRR ++ +W+
Sbjct: 132 TVWHFRRVLL--RSLQKDLQEEMNYIIAIIEEQPKNYQVWHHRRVLV----------EWL 179
Query: 191 IE--RESELVEKIAERSKMNYRAWNHRCWLVS-FMTRE---QVLDELKKS--RN---WSG 239
+ +E E + I + NY AW HR W++ F + Q +D+L K RN W+
Sbjct: 180 KDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFRLWDNELQYVDQLLKEDVRNNSVWNQ 239
Query: 240 LH-VADNSCFHYRRRLMLRNLE 260
H V N+ + R ++ R ++
Sbjct: 240 RHFVISNTTGYSDRAVLEREVQ 261
>UNIPROTKB|F1MGN1 [details] [associations]
symbol:RABGGTA "Geranylgeranyl transferase type-2 subunit
alpha" species:9913 "Bos taurus" [GO:0018342 "protein prenylation"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004663 "Rab geranylgeranyltransferase activity" evidence=IEA]
InterPro:IPR002088 InterPro:IPR009087 Pfam:PF01239 Pfam:PF07711
ProDom:PD331837 PROSITE:PS51147 GO:GO:0008270 GO:GO:0018342
GO:GO:0004663 GeneTree:ENSGT00550000075121 Gene3D:2.60.40.1130
SUPFAM:SSF49594 EMBL:DAAA02028027 IPI:IPI00689272
Ensembl:ENSBTAT00000036474 ArrayExpress:F1MGN1 Uniprot:F1MGN1
Length = 333
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 51/211 (24%), Positives = 90/211 (42%)
Query: 105 KSQDDTLAIEVMIHSKALLLLSCDFATAWNSRKLIV-------SNKRLLPILMDELHLSA 157
K Q L V+ + +L + DFAT WN R+ ++ S + L ++ EL
Sbjct: 38 KRQAGELDESVLELTSQILGANPDFATLWNCRREVLQQLEVQKSPEELATLVKAELGFLE 97
Query: 158 LVLSYSPKSEQAWSHRRWVINMISRNCSTLQWIIERESELVEKIAERSKMNYRAWNHRCW 217
L +PKS W HR W+++ + W RE EL + E + N+ W++R +
Sbjct: 98 SCLRVNPKSYGTWHHRCWLLSRLPEP----NWA--RELELCARFLEVDERNFHCWDYRRF 151
Query: 218 LVSFMTREQVLDELKKSRNWSGLHVADNSCFHYRRRLMLRNLEGFCYTQDNNSSGYFVET 277
V+ +EL + + + ++ S +HYR L L L D+ G E
Sbjct: 152 -VAAQAAVPPAEELAFTDSLITRNFSNYSSWHYRSCL-LPQLHP---QPDSGPQGRLPE- 205
Query: 278 YQIWKEELDWNESLIKQYVGREALWLHRRFL 308
+ +EL+ ++ ++ W + R+L
Sbjct: 206 -DVLLKELELVQNAFFTDPNDQSAWFYHRWL 235
>UNIPROTKB|H0YCW1 [details] [associations]
symbol:FNTA "Protein
farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha"
species:9606 "Homo sapiens" [GO:0008318 "protein prenyltransferase
activity" evidence=IEA] [GO:0018342 "protein prenylation"
evidence=IEA] InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147
GO:GO:0008318 GO:GO:0018342 EMBL:AC110275 EMBL:AC113191
HGNC:HGNC:3782 Ensembl:ENST00000531266 Bgee:H0YCW1 Uniprot:H0YCW1
Length = 197
Score = 116 (45.9 bits), Expect = 0.00011, P = 0.00011
Identities = 26/89 (29%), Positives = 46/89 (51%)
Query: 131 TAWNSRKLIVSNKRLLPILMDELHLSALVLSYSPKSEQAWSHRRWVINMISRNCSTLQWI 190
T W+ R++++ K L L +E++ ++ PK+ Q W HRR ++ + R+ S
Sbjct: 114 TVWHFRRVLL--KSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWL-RDPS----- 165
Query: 191 IERESELVEKIAERSKMNYRAWNHRCWLV 219
+E E + I + NY AW HR W++
Sbjct: 166 --QELEFIADILNQDAKNYHAWQHRQWVI 192
>UNIPROTKB|H0YLH3 [details] [associations]
symbol:RABGGTA "Geranylgeranyl transferase type-2 subunit
alpha" species:9606 "Homo sapiens" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0018342 "protein prenylation"
evidence=IEA] InterPro:IPR002088 InterPro:IPR009087 Pfam:PF01239
Pfam:PF07711 ProDom:PD331837 PROSITE:PS51147 GO:GO:0008270
EMBL:AL096870 GO:GO:0018342 GO:GO:0004663 Gene3D:2.60.40.1130
SUPFAM:SSF49594 HGNC:HGNC:9795 SMR:H0YLH3 Ensembl:ENST00000558376
Ensembl:ENST00000559974 Uniprot:H0YLH3
Length = 424
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 55/223 (24%), Positives = 93/223 (41%)
Query: 93 LRQYKTPGNFSGKSQDDTLAIEVMIHSKALLLLSCDFATAWNSRKLIV-------SNKRL 145
L Q T F K Q L V+ + +L + DFAT WN R+ ++ S + L
Sbjct: 27 LYQSATQAVFQ-KRQAGELDESVLELTSQILGANPDFATLWNCRREVLQQLETQKSPEEL 85
Query: 146 LPILMDELHLSALVLSYSPKSEQAWSHRRWVINMISRNCSTLQWIIERESELVEKIAERS 205
++ EL L +PKS W HR W++ + W RE EL + E
Sbjct: 86 AALVKAELGFLESCLRVNPKSYGTWHHRCWLLGRLPEP----NWT--RELELCARFLEVD 139
Query: 206 KMNYRAWNHRCWLVSFMTREQVLDELKKSRNWSGLHVADNSCFHYRRRLMLRNLEGFCYT 265
+ N+ W++R + V+ +EL + + + ++ S +HYR L L L
Sbjct: 140 ERNFHCWDYRRF-VATQAAVPPAEELAFTDSLITRNFSNYSSWHYRSCL-LPQLHP---Q 194
Query: 266 QDNNSSGYFVETYQIWKEELDWNESLIKQYVGREALWLHRRFL 308
D+ G E + +EL+ ++ ++ W + R+L
Sbjct: 195 PDSGPQGRLPE--DVLLKELELVQNAFFTDPNDQSAWFYHRWL 235
>UNIPROTKB|F1N081 [details] [associations]
symbol:FNTA "Protein
farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha"
species:9913 "Bos taurus" [GO:0090045 "positive regulation of
deacetylase activity" evidence=IEA] [GO:0090044 "positive
regulation of tubulin deacetylation" evidence=IEA] [GO:0045213
"neurotransmitter receptor metabolic process" evidence=IEA]
[GO:0043014 "alpha-tubulin binding" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0030548
"acetylcholine receptor regulator activity" evidence=IEA]
[GO:0018343 "protein farnesylation" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=IEA] [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0004660
"protein farnesyltransferase activity" evidence=IEA]
InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147 GO:GO:0030548
GO:GO:0045213 GO:GO:0071340 KO:K05955 RefSeq:NP_803464.2
UniGene:Bt.407 GeneID:281169 KEGG:bta:281169 CTD:2339
NextBio:20805229 GO:GO:0018342 OMA:HRRFIVE
GeneTree:ENSGT00550000074935 GO:GO:0004663 EMBL:DAAA02060964
IPI:IPI01017544 Ensembl:ENSBTAT00000004159 ArrayExpress:F1N081
Uniprot:F1N081
Length = 375
Score = 122 (48.0 bits), Expect = 0.00013, P = 0.00013
Identities = 38/140 (27%), Positives = 70/140 (50%)
Query: 131 TAWNSRKLIVSNKRLLPILMDELHLSALVLSYSPKSEQAWSHRRWVINMISRNCSTLQWI 190
T W+ R++++ K L L +E++ + ++ PK+ Q W HRR ++ + R+ S
Sbjct: 128 TVWHFRRVLL--KSLQKDLHEEMNYISAIIEEQPKNYQVWHHRRVLVEWL-RDPS----- 179
Query: 191 IERESELVEKIAERSKMNYRAWNHRCWLVS-FMTRE---QVLDELKKS--RN---WSGLH 241
+E E + I + NY AW HR W++ F + Q +D+L K RN W+ +
Sbjct: 180 --QELEFIADILTQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRY 237
Query: 242 -VADNSCFHYRRRLMLRNLE 260
V N+ + R ++ R ++
Sbjct: 238 FVISNTTGYNDRAILEREVQ 257
>UNIPROTKB|P29702 [details] [associations]
symbol:FNTA "Protein
farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha"
species:9913 "Bos taurus" [GO:0004662 "CAAX-protein
geranylgeranyltransferase activity" evidence=IEA] [GO:0004660
"protein farnesyltransferase activity" evidence=IEA] [GO:0018342
"protein prenylation" evidence=IEA] InterPro:IPR002088 Pfam:PF01239
PROSITE:PS51147 EMBL:M74083 eggNOG:COG5536 HOGENOM:HOG000188957
KO:K05955 GO:GO:0004662 GO:GO:0004660 EMBL:BC112662 IPI:IPI00706713
PIR:A41013 RefSeq:NP_803464.2 UniGene:Bt.407
ProteinModelPortal:P29702 SMR:P29702 STRING:P29702 PRIDE:P29702
GeneID:281169 KEGG:bta:281169 CTD:2339 HOVERGEN:HBG004498
InParanoid:P29702 OrthoDB:EOG46DM39 BindingDB:P29702
ChEMBL:CHEMBL2377 NextBio:20805229 GO:GO:0018342 Uniprot:P29702
Length = 375
Score = 122 (48.0 bits), Expect = 0.00013, P = 0.00013
Identities = 38/140 (27%), Positives = 70/140 (50%)
Query: 131 TAWNSRKLIVSNKRLLPILMDELHLSALVLSYSPKSEQAWSHRRWVINMISRNCSTLQWI 190
T W+ R++++ K L L +E++ + ++ PK+ Q W HRR ++ + R+ S
Sbjct: 128 TVWHFRRVLL--KSLQKDLHEEMNYISAIIEEQPKNYQVWHHRRVLVEWL-RDPS----- 179
Query: 191 IERESELVEKIAERSKMNYRAWNHRCWLVS-FMTRE---QVLDELKKS--RN---WSGLH 241
+E E + I + NY AW HR W++ F + Q +D+L K RN W+ +
Sbjct: 180 --QELEFIADILTQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRY 237
Query: 242 -VADNSCFHYRRRLMLRNLE 260
V N+ + R ++ R ++
Sbjct: 238 FVISNTTGYNDRAILEREVQ 257
>UNIPROTKB|P49354 [details] [associations]
symbol:FNTA "Protein
farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha"
species:9606 "Homo sapiens" [GO:0004662 "CAAX-protein
geranylgeranyltransferase activity" evidence=IEA] [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0030548
"acetylcholine receptor regulator activity" evidence=IEA]
[GO:0030971 "receptor tyrosine kinase binding" evidence=IEA]
[GO:0045213 "neurotransmitter receptor metabolic process"
evidence=IEA] [GO:0004661 "protein geranylgeranyltransferase
activity" evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS]
[GO:0018344 "protein geranylgeranylation" evidence=TAS] [GO:0007179
"transforming growth factor beta receptor signaling pathway"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006915
"apoptotic process" evidence=TAS] [GO:0006921 "cellular component
disassembly involved in execution phase of apoptosis" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0018343 "protein
farnesylation" evidence=IDA] [GO:0004660 "protein
farnesyltransferase activity" evidence=IDA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0043014
"alpha-tubulin binding" evidence=IDA] [GO:0008017 "microtubule
binding" evidence=IDA] [GO:0090045 "positive regulation of
deacetylase activity" evidence=IDA] [GO:0090044 "positive
regulation of tubulin deacetylation" evidence=IDA]
Reactome:REACT_578 InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147
GO:GO:0005829 GO:GO:0005875 GO:GO:0007179 GO:GO:0006921
GO:GO:0018343 GO:GO:0008017 GO:GO:0043014 GO:GO:0090045
eggNOG:COG5536 HOGENOM:HOG000188957 KO:K05955 GO:GO:0004662
GO:GO:0004660 GO:GO:0018344 CTD:2339 HOVERGEN:HBG004498
OrthoDB:EOG46DM39 OMA:HRRFIVE EMBL:L10413 EMBL:L00634 EMBL:AC110275
EMBL:BT009854 EMBL:AK292121 EMBL:AC113191 EMBL:BC017029
EMBL:BC084566 EMBL:AL698961 IPI:IPI00026813 IPI:IPI00607601
PIR:A47659 RefSeq:NP_002018.1 UniGene:Hs.370312 PDB:1JCQ PDB:1LD7
PDB:1LD8 PDB:1MZC PDB:1S63 PDB:1SA4 PDB:1TN6 PDB:2F0Y PDB:2H6F
PDB:2H6G PDB:2H6H PDB:2H6I PDB:2IEJ PDB:3E37 PDBsum:1JCQ
PDBsum:1LD7 PDBsum:1LD8 PDBsum:1MZC PDBsum:1S63 PDBsum:1SA4
PDBsum:1TN6 PDBsum:2F0Y PDBsum:2H6F PDBsum:2H6G PDBsum:2H6H
PDBsum:2H6I PDBsum:2IEJ PDBsum:3E37 ProteinModelPortal:P49354
SMR:P49354 IntAct:P49354 MINT:MINT-238861 STRING:P49354
PhosphoSite:P49354 DMDM:1346694 PaxDb:P49354 PRIDE:P49354
DNASU:2339 Ensembl:ENST00000302279 Ensembl:ENST00000342116
GeneID:2339 KEGG:hsa:2339 UCSC:uc003xps.3 GeneCards:GC08P042928
HGNC:HGNC:3782 HPA:CAB010149 HPA:HPA018830 MIM:134635
neXtProt:NX_P49354 PharmGKB:PA28199 InParanoid:P49354
PhylomeDB:P49354 BindingDB:P49354 ChEMBL:CHEMBL271
EvolutionaryTrace:P49354 GenomeRNAi:2339 NextBio:9495
PMAP-CutDB:P49354 ArrayExpress:P49354 Bgee:P49354 CleanEx:HS_FNTA
Genevestigator:P49354 GermOnline:ENSG00000168522 GO:GO:0004661
GO:GO:0090044 Uniprot:P49354
Length = 379
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 37/136 (27%), Positives = 67/136 (49%)
Query: 131 TAWNSRKLIVSNKRLLPILMDELHLSALVLSYSPKSEQAWSHRRWVINMISRNCSTLQWI 190
T W+ R++++ K L L +E++ ++ PK+ Q W HRR ++ + R+ S
Sbjct: 132 TVWHFRRVLL--KSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWL-RDPS----- 183
Query: 191 IERESELVEKIAERSKMNYRAWNHRCWLVS-FMTRE---QVLDELKKSRNWSGLHVADNS 246
+E E + I + NY AW HR W++ F + Q +D+L K V +NS
Sbjct: 184 --QELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKE------DVRNNS 235
Query: 247 CFHYRRRLMLRNLEGF 262
++ +R ++ N G+
Sbjct: 236 VWN-QRYFVISNTTGY 250
>UNIPROTKB|Q92696 [details] [associations]
symbol:RABGGTA "Geranylgeranyl transferase type-2 subunit
alpha" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=IEA] [GO:0018344 "protein geranylgeranylation"
evidence=IEA] [GO:0006464 "cellular protein modification process"
evidence=TAS] [GO:0007601 "visual perception" evidence=TAS]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR002088
InterPro:IPR009087 Pfam:PF01239 Pfam:PF07711 ProDom:PD331837
PROSITE:PS51147 PROSITE:PS51450 GO:GO:0046872 GO:GO:0007601
GO:GO:0008270 EMBL:CH471078 GO:GO:0006464
Pathway_Interaction_DB:prlsignalingeventspathway eggNOG:COG5536
GO:GO:0018344 GO:GO:0004663 CTD:5875 HOGENOM:HOG000007845
HOVERGEN:HBG002171 KO:K14050 OMA:DFATLWN OrthoDB:EOG4FXR7F
Gene3D:2.60.40.1130 SUPFAM:SSF49594 EMBL:Y08200 EMBL:AK291347
EMBL:AK292613 EMBL:BC003093 IPI:IPI00022664 PIR:JC5538
RefSeq:NP_004572.3 RefSeq:NP_878256.1 UniGene:Hs.377992
ProteinModelPortal:Q92696 SMR:Q92696 STRING:Q92696
PhosphoSite:Q92696 DMDM:6093707 PaxDb:Q92696 PRIDE:Q92696
Ensembl:ENST00000216840 Ensembl:ENST00000399409 GeneID:5875
KEGG:hsa:5875 UCSC:uc001wof.3 GeneCards:GC14M024734 HGNC:HGNC:9795
HPA:HPA043488 MIM:601905 neXtProt:NX_Q92696 PharmGKB:PA34156
InParanoid:Q92696 BindingDB:Q92696 ChEMBL:CHEMBL5249
GenomeRNAi:5875 NextBio:22826 ArrayExpress:Q92696 Bgee:Q92696
CleanEx:HS_RABGGTA Genevestigator:Q92696 GermOnline:ENSG00000100949
Uniprot:Q92696
Length = 567
Score = 123 (48.4 bits), Expect = 0.00020, P = 0.00020
Identities = 55/223 (24%), Positives = 93/223 (41%)
Query: 93 LRQYKTPGNFSGKSQDDTLAIEVMIHSKALLLLSCDFATAWNSRKLIV-------SNKRL 145
L Q T F K Q L V+ + +L + DFAT WN R+ ++ S + L
Sbjct: 27 LYQSATQAVFQ-KRQAGELDESVLELTSQILGANPDFATLWNCRREVLQQLETQKSPEEL 85
Query: 146 LPILMDELHLSALVLSYSPKSEQAWSHRRWVINMISRNCSTLQWIIERESELVEKIAERS 205
++ EL L +PKS W HR W++ + W RE EL + E
Sbjct: 86 AALVKAELGFLESCLRVNPKSYGTWHHRCWLLGRLPEP----NWT--RELELCARFLEVD 139
Query: 206 KMNYRAWNHRCWLVSFMTREQVLDELKKSRNWSGLHVADNSCFHYRRRLMLRNLEGFCYT 265
+ N+ W++R + V+ +EL + + + ++ S +HYR L L L
Sbjct: 140 ERNFHCWDYRRF-VATQAAVPPAEELAFTDSLITRNFSNYSSWHYRSCL-LPQLHP---Q 194
Query: 266 QDNNSSGYFVETYQIWKEELDWNESLIKQYVGREALWLHRRFL 308
D+ G E + +EL+ ++ ++ W + R+L
Sbjct: 195 PDSGPQGRLPE--DVLLKELELVQNAFFTDPNDQSAWFYHRWL 235
>UNIPROTKB|A5A779 [details] [associations]
symbol:RABGGTA "Geranylgeranyl transferase type-2 subunit
alpha" species:9823 "Sus scrofa" [GO:0018344 "protein
geranylgeranylation" evidence=IEA] [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR002088 InterPro:IPR009087 Pfam:PF01239 Pfam:PF07711
ProDom:PD331837 PROSITE:PS51147 GO:GO:0046872 GO:GO:0008270
InterPro:IPR025875 Pfam:PF12799 eggNOG:COG5536 GO:GO:0018344
GO:GO:0004663 CTD:5875 GeneTree:ENSGT00550000075121
HOGENOM:HOG000007845 HOVERGEN:HBG002171 KO:K14050 OMA:DFATLWN
OrthoDB:EOG4FXR7F Gene3D:2.60.40.1130 SUPFAM:SSF49594 EMBL:AB271949
RefSeq:NP_001092063.1 UniGene:Ssc.45681 ProteinModelPortal:A5A779
SMR:A5A779 STRING:A5A779 Ensembl:ENSSSCT00000002230
GeneID:100049679 KEGG:ssc:100049679 Uniprot:A5A779
Length = 567
Score = 123 (48.4 bits), Expect = 0.00020, P = 0.00020
Identities = 51/211 (24%), Positives = 89/211 (42%)
Query: 105 KSQDDTLAIEVMIHSKALLLLSCDFATAWNSRKLIV-------SNKRLLPILMDELHLSA 157
K Q L V+ + +L + DFAT WN R+ ++ S + L ++ EL
Sbjct: 38 KRQAGELDESVLELTSQILGANPDFATLWNCRREVLQRLEVQKSPEELAALVKAELGFLE 97
Query: 158 LVLSYSPKSEQAWSHRRWVINMISRNCSTLQWIIERESELVEKIAERSKMNYRAWNHRCW 217
L +PKS W HR W++ + W RE EL + E + N+ W++R +
Sbjct: 98 SCLRVNPKSYGTWHHRCWLLGRLPEP----NWA--RELELCARFLEVDERNFHCWDYRRF 151
Query: 218 LVSFMTREQVLDELKKSRNWSGLHVADNSCFHYRRRLMLRNLEGFCYTQDNNSSGYFVET 277
+ S +EL + + + ++ S +HYR L L L D+ G E
Sbjct: 152 VAS-QAAVPPAEELAFTDSLITRNFSNYSSWHYRSCL-LPQLHP---QPDSGPQGRLPE- 205
Query: 278 YQIWKEELDWNESLIKQYVGREALWLHRRFL 308
+ +EL+ ++ ++ W + R+L
Sbjct: 206 -DVLLKELELVQNAFFTDPNDQSAWFYHRWL 235
>UNIPROTKB|E2RHY8 [details] [associations]
symbol:FNTA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090045 "positive regulation of deacetylase
activity" evidence=IEA] [GO:0090044 "positive regulation of tubulin
deacetylation" evidence=IEA] [GO:0045213 "neurotransmitter receptor
metabolic process" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0030971 "receptor tyrosine kinase
binding" evidence=IEA] [GO:0030548 "acetylcholine receptor
regulator activity" evidence=IEA] [GO:0018343 "protein
farnesylation" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IEA] [GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=IEA] [GO:0004660 "protein farnesyltransferase activity"
evidence=IEA] InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147
GO:GO:0030548 GO:GO:0045213 GO:GO:0071340 KO:K05955 CTD:2339
GO:GO:0018342 OMA:HRRFIVE GeneTree:ENSGT00550000074935
GO:GO:0004663 EMBL:AAEX03010368 RefSeq:XP_532786.2
ProteinModelPortal:E2RHY8 Ensembl:ENSCAFT00000008664 GeneID:475566
KEGG:cfa:475566 NextBio:20851380 Uniprot:E2RHY8
Length = 380
Score = 120 (47.3 bits), Expect = 0.00023, P = 0.00023
Identities = 37/142 (26%), Positives = 69/142 (48%)
Query: 131 TAWNSRKLIVSNKRLLPILMDELHLSALVLSYSPKSEQAWSHRRWVINMISRNCSTLQWI 190
T W+ R++++ K L L +E++ ++ PK+ Q W HRR ++ +W+
Sbjct: 133 TVWHFRRVLL--KSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLV----------EWL 180
Query: 191 IE--RESELVEKIAERSKMNYRAWNHRCWLVS-FMTRE---QVLDELKKS--RN---WSG 239
+ +E E + I + NY AW HR W++ F + Q +D+L K RN W+
Sbjct: 181 KDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQ 240
Query: 240 LH-VADNSCFHYRRRLMLRNLE 260
+ V N+ + R ++ R ++
Sbjct: 241 RYFVISNTTGYNDRAILEREVQ 262
>UNIPROTKB|Q5EA80 [details] [associations]
symbol:RABGGTA "Geranylgeranyl transferase type-2 subunit
alpha" species:9913 "Bos taurus" [GO:0018344 "protein
geranylgeranylation" evidence=IEA] [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR002088 InterPro:IPR009087 Pfam:PF01239 Pfam:PF07711
ProDom:PD331837 PROSITE:PS51147 GO:GO:0046872 GO:GO:0008270
eggNOG:COG5536 GO:GO:0018344 GO:GO:0004663 EMBL:BT020689
EMBL:BT020760 EMBL:BT020911 EMBL:BC111228 EMBL:BT020650
IPI:IPI00717057 RefSeq:NP_001015614.1 UniGene:Bt.7696
ProteinModelPortal:Q5EA80 SMR:Q5EA80 STRING:Q5EA80 PRIDE:Q5EA80
Ensembl:ENSBTAT00000025020 GeneID:516619 KEGG:bta:516619 CTD:5875
GeneTree:ENSGT00550000075121 HOGENOM:HOG000007845
HOVERGEN:HBG002171 InParanoid:Q5EA80 KO:K14050 OMA:DFATLWN
OrthoDB:EOG4FXR7F NextBio:20872272 ArrayExpress:Q5EA80
Gene3D:2.60.40.1130 SUPFAM:SSF49594 Uniprot:Q5EA80
Length = 567
Score = 122 (48.0 bits), Expect = 0.00026, P = 0.00026
Identities = 51/211 (24%), Positives = 90/211 (42%)
Query: 105 KSQDDTLAIEVMIHSKALLLLSCDFATAWNSRKLIV-------SNKRLLPILMDELHLSA 157
K Q L V+ + +L + DFAT WN R+ ++ S + L ++ EL
Sbjct: 38 KRQAGELDESVLELTSQILGANPDFATLWNCRREVLQQLEVQKSPEELATLVKAELGFLE 97
Query: 158 LVLSYSPKSEQAWSHRRWVINMISRNCSTLQWIIERESELVEKIAERSKMNYRAWNHRCW 217
L +PKS W HR W+++ + W RE EL + E + N+ W++R +
Sbjct: 98 SCLRVNPKSYGTWHHRCWLLSRLPEP----NWA--RELELCARFLEVDERNFHCWDYRRF 151
Query: 218 LVSFMTREQVLDELKKSRNWSGLHVADNSCFHYRRRLMLRNLEGFCYTQDNNSSGYFVET 277
V+ +EL + + + ++ S +HYR L L L D+ G E
Sbjct: 152 -VAAQAAVPPAEELAFTDSLITRNFSNYSSWHYRSCL-LPQLHP---QPDSGPQGRLPE- 205
Query: 278 YQIWKEELDWNESLIKQYVGREALWLHRRFL 308
+ +EL+ ++ ++ W + R+L
Sbjct: 206 -DVLLKELELVQNAFFTDPNDQSAWFYHRWL 235
>UNIPROTKB|F1PIE1 [details] [associations]
symbol:RABGGTA "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0018342 "protein prenylation"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004663 "Rab geranylgeranyltransferase activity" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR002088
InterPro:IPR009087 Pfam:PF01239 Pfam:PF07711 ProDom:PD331837
PROSITE:PS51147 GO:GO:0008270 InterPro:IPR025875 Pfam:PF12799
GO:GO:0018342 GO:GO:0004663 CTD:5875 GeneTree:ENSGT00550000075121
KO:K14050 OMA:DFATLWN Gene3D:2.60.40.1130 SUPFAM:SSF49594
EMBL:AAEX03005616 RefSeq:XP_850528.1 Ensembl:ENSCAFT00000019372
GeneID:608407 KEGG:cfa:608407 Uniprot:F1PIE1
Length = 567
Score = 122 (48.0 bits), Expect = 0.00026, P = 0.00026
Identities = 51/211 (24%), Positives = 89/211 (42%)
Query: 105 KSQDDTLAIEVMIHSKALLLLSCDFATAWNSRKLIV-------SNKRLLPILMDELHLSA 157
K Q L V+ + +L + DFAT WN R+ ++ S + L ++ EL
Sbjct: 38 KRQAGELDESVLELTSQILGANPDFATLWNCRREVLQRLEAQKSPEELAALVKTELGFLE 97
Query: 158 LVLSYSPKSEQAWSHRRWVINMISRNCSTLQWIIERESELVEKIAERSKMNYRAWNHRCW 217
L +PKS W HR W++ + W RE EL + E + N+ W++R +
Sbjct: 98 SCLRVNPKSYGTWHHRCWLLGRLPEP----NWA--RELELCARFLEVDERNFHCWDYRRF 151
Query: 218 LVSFMTREQVLDELKKSRNWSGLHVADNSCFHYRRRLMLRNLEGFCYTQDNNSSGYFVET 277
V+ +EL + + + ++ S +HYR L L L D+ G E
Sbjct: 152 -VAAQAAVPPAEELAFTDSLITRNFSNYSSWHYRSCL-LPQLHP---QPDSGPQGRLPE- 205
Query: 278 YQIWKEELDWNESLIKQYVGREALWLHRRFL 308
+ +EL+ ++ ++ W + R+L
Sbjct: 206 -DVLLKELELVQNAFFTDPNDQSAWFYHRWL 235
>MGI|MGI:1860443 [details] [associations]
symbol:Rabggta "Rab geranylgeranyl transferase, a subunit"
species:10090 "Mus musculus" [GO:0004659 "prenyltransferase
activity" evidence=IEA] [GO:0004663 "Rab geranylgeranyltransferase
activity" evidence=ISO;IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008318 "protein prenyltransferase activity"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0018342 "protein prenylation" evidence=IEA] [GO:0018344
"protein geranylgeranylation" evidence=ISO;IMP] [GO:0046872 "metal
ion binding" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR002088 InterPro:IPR009087 Pfam:PF01239 Pfam:PF07711
ProDom:PD331837 PROSITE:PS51147 MGI:MGI:1860443 GO:GO:0046872
GO:GO:0008270 eggNOG:COG5536 GO:GO:0018344 GO:GO:0004663 CTD:5875
GeneTree:ENSGT00550000075121 HOGENOM:HOG000007845
HOVERGEN:HBG002171 KO:K14050 OMA:DFATLWN OrthoDB:EOG4FXR7F
Gene3D:2.60.40.1130 SUPFAM:SSF49594 EMBL:AF127654 EMBL:AF127655
EMBL:AF127656 EMBL:AF127658 EMBL:AF127659 EMBL:AF127660
EMBL:AF127662 EMBL:AK002625 IPI:IPI00271905 IPI:IPI00620701
RefSeq:NP_062392.1 UniGene:Mm.87216 PDB:3PZ1 PDB:3PZ2 PDB:3PZ3
PDBsum:3PZ1 PDBsum:3PZ2 PDBsum:3PZ3 ProteinModelPortal:Q9JHK4
SMR:Q9JHK4 IntAct:Q9JHK4 STRING:Q9JHK4 PhosphoSite:Q9JHK4
PaxDb:Q9JHK4 PRIDE:Q9JHK4 Ensembl:ENSMUST00000062861
Ensembl:ENSMUST00000163889 Ensembl:ENSMUST00000169237 GeneID:56187
KEGG:mmu:56187 UCSC:uc007uai.1 InParanoid:Q9JHK4
EvolutionaryTrace:Q9JHK4 NextBio:311974 Bgee:Q9JHK4
CleanEx:MM_RABGGTA Genevestigator:Q9JHK4
GermOnline:ENSMUSG00000040472 Uniprot:Q9JHK4
Length = 567
Score = 122 (48.0 bits), Expect = 0.00026, P = 0.00026
Identities = 55/223 (24%), Positives = 92/223 (41%)
Query: 93 LRQYKTPGNFSGKSQDDTLAIEVMIHSKALLLLSCDFATAWNSRKLIV-------SNKRL 145
L Q T F K + L V+ + +L + DFAT WN R+ ++ S + L
Sbjct: 27 LYQSATQAVFQ-KREAGELDESVLELTSQILGANPDFATLWNCRREVLQQLETQKSPEEL 85
Query: 146 LPILMDELHLSALVLSYSPKSEQAWSHRRWVINMISRNCSTLQWIIERESELVEKIAERS 205
++ EL L +PKS W HR W+++ + W RE EL + E
Sbjct: 86 AALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEP----NWA--RELELCARFLEAD 139
Query: 206 KMNYRAWNHRCWLVSFMTREQVLDELKKSRNWSGLHVADNSCFHYRRRLMLRNLEGFCYT 265
+ N+ W++R + V+ +EL + + + ++ S +HYR L L L
Sbjct: 140 ERNFHCWDYRRF-VAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCL-LPQLHP---Q 194
Query: 266 QDNNSSGYFVETYQIWKEELDWNESLIKQYVGREALWLHRRFL 308
D+ G E + + EL N ++ W + R+L
Sbjct: 195 PDSGPQGRLPENVLLRELELVQNAFFTDP--NDQSAWFYHRWL 235
>POMBASE|SPCC1620.05 [details] [associations]
symbol:SPCC1620.05 "Rab geranylgeranyltransferase alpha
subunit (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004663 "Rab geranylgeranyltransferase activity" evidence=ISO]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005968 "Rab-protein geranylgeranyltransferase
complex" evidence=ISO] [GO:0006612 "protein targeting to membrane"
evidence=IC] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISO] [GO:0018344 "protein geranylgeranylation"
evidence=ISO] [GO:0032153 "cell division site" evidence=IDA]
[GO:0044732 "mitotic spindle pole body" evidence=IDA]
InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147 PomBase:SPCC1620.05
GO:GO:0005829 GO:GO:0005634 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0032153 GO:GO:0044732 GO:GO:0006612 GO:GO:0006888
eggNOG:COG5536 GO:GO:0018344 GO:GO:0004663 KO:K14050 HSSP:Q08602
OMA:FPKCYWI GO:GO:0005968 PIR:T41035 RefSeq:NP_588463.1
ProteinModelPortal:O94412 STRING:O94412 EnsemblFungi:SPCC1620.05.1
GeneID:2539343 KEGG:spo:SPCC1620.05 HOGENOM:HOG000190796
OrthoDB:EOG454D7T NextBio:20800508 Uniprot:O94412
Length = 344
Score = 118 (46.6 bits), Expect = 0.00032, P = 0.00032
Identities = 54/230 (23%), Positives = 97/230 (42%)
Query: 131 TAWNSRKLIVSNKRLLPI-------LMD-ELHLSALVLSYSPKSEQAWSHRRWVINMISR 182
+ WN R+ I+ N I L+D EL + PK ++HRRW +
Sbjct: 64 SVWNYRREILLNDVFPKISLNEKQDLLDNELKYVLSKMKVFPKVYWIFNHRRWCLE---- 119
Query: 183 NCSTLQWIIERESELVEKIAERSKMNYRAWNHRCWLVSFMTREQVLDELKKSRNWSGLHV 242
N W E + EK+ N+ W++R ++VS + R KK ++ +
Sbjct: 120 NAPYPNW--NYEMMITEKLLSADARNFHGWHYRRYVVSQIERAGNCSLAKKEMEYTTSAI 177
Query: 243 ADN----SCFHYRRRLM--LRNLEGFCYTQDNNSSGYFVETYQIWKEELDWNESLIKQYV 296
A N S H R +L+ + NLE D NS + QI ++ELD +
Sbjct: 178 ATNFSNFSALHNRTKLIETILNLEA-----DPNSQKALAK--QILEQELDMIHQAVFTDP 230
Query: 297 GREALWLHRRFLSMYLIKHMATHLLAVSCQSKPKASVDIDIDSLMD-HEL 345
++W++ R+L + + T L+++ + + +I+ + + HE+
Sbjct: 231 DDSSVWIYHRWLMGHCNPNSMTPLISMITIEERIQYLQKEIELIQELHEM 280
>SGD|S000003568 [details] [associations]
symbol:BET4 "Alpha subunit of Type II
geranylgeranyltransferase" species:4932 "Saccharomyces cerevisiae"
[GO:0006612 "protein targeting to membrane" evidence=IMP]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IMP]
[GO:0004659 "prenyltransferase activity" evidence=IEA] [GO:0005968
"Rab-protein geranylgeranyltransferase complex" evidence=IDA;IPI]
[GO:0018342 "protein prenylation" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0018344 "protein
geranylgeranylation" evidence=IMP;IDA] [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA;IDA] [GO:0008318
"protein prenyltransferase activity" evidence=IEA]
InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147 SGD:S000003568
EMBL:U14132 EMBL:BK006943 GO:GO:0006612 GO:GO:0006888
eggNOG:COG5536 GO:GO:0018344 GO:GO:0004663
GeneTree:ENSGT00550000075121 KO:K14050 OMA:FPKCYWI GO:GO:0005968
HOGENOM:HOG000190796 OrthoDB:EOG454D7T EMBL:Z49307 PIR:S48301
RefSeq:NP_012503.2 ProteinModelPortal:Q00618 SMR:Q00618
DIP:DIP-4994N IntAct:Q00618 MINT:MINT-568965 STRING:Q00618
PaxDb:Q00618 EnsemblFungi:YJL031C GeneID:853421 KEGG:sce:YJL031C
CYGD:YJL031c NextBio:973945 Genevestigator:Q00618
GermOnline:YJL031C Uniprot:Q00618
Length = 327
Score = 117 (46.2 bits), Expect = 0.00037, P = 0.00037
Identities = 39/159 (24%), Positives = 76/159 (47%)
Query: 107 QDDTL-AIEVMIHSKALLLLSCDFATAWNSRKLIVSN--KRL-LPILMDELHLSALVLSY 162
+D+ + +IE + + LL + +F WN R+ I+++ L +P EL ++L
Sbjct: 39 RDEKIYSIEALKKTSELLEKNPEFNAIWNYRRDIIASLASELEIPFWDKELVFVMMLLKD 98
Query: 163 SPKSEQAWSHRRWVINMISRNCSTLQWIIERESELVEKIAERSKMNYRAWNHRCWLV--- 219
PK W+HR WV+ + S W + E +V K+ E+ NY W++R +V
Sbjct: 99 YPKVYWIWNHRLWVLKHYPTS-SPKVW--QTELAVVNKLLEQDARNYHGWHYRRIVVGNI 155
Query: 220 -SFMTREQVLDELKKSRNWSGLHVADNSCFHYRRRLMLR 257
S + +E + + ++++ S +H R +++ R
Sbjct: 156 ESITNKSLDKEEFEYTTIKINNNISNYSAWHQRVQIISR 194
>RGD|621697 [details] [associations]
symbol:Rabggta "Rab geranylgeranyltransferase, alpha subunit"
species:10116 "Rattus norvegicus" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=ISO;IDA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0018344 "protein
geranylgeranylation" evidence=ISO;IDA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR002088 InterPro:IPR009087
Pfam:PF01239 Pfam:PF07711 ProDom:PD331837 PROSITE:PS51147
RGD:621697 GO:GO:0046872 GO:GO:0008270 eggNOG:COG5536 GO:GO:0018344
GO:GO:0004663 CTD:5875 GeneTree:ENSGT00550000075121
HOGENOM:HOG000007845 HOVERGEN:HBG002171 KO:K14050 OrthoDB:EOG4FXR7F
Gene3D:2.60.40.1130 SUPFAM:SSF49594 EMBL:L10415 EMBL:S62096
EMBL:BC086547 IPI:IPI00231284 PIR:A45977 RefSeq:NP_113842.1
UniGene:Rn.29434 PDB:1DCE PDB:1LTX PDB:3C72 PDB:3DSS PDB:3DST
PDB:3DSU PDB:3DSV PDB:3DSW PDB:3DSX PDB:3HXB PDB:3HXC PDB:3HXD
PDB:3HXE PDB:3HXF PDB:4EHM PDB:4GTS PDB:4GTT PDB:4GTV PDBsum:1DCE
PDBsum:1LTX PDBsum:3C72 PDBsum:3DSS PDBsum:3DST PDBsum:3DSU
PDBsum:3DSV PDBsum:3DSW PDBsum:3DSX PDBsum:3HXB PDBsum:3HXC
PDBsum:3HXD PDBsum:3HXE PDBsum:3HXF PDBsum:4EHM PDBsum:4GTS
PDBsum:4GTT PDBsum:4GTV ProteinModelPortal:Q08602 SMR:Q08602
DIP:DIP-6137N STRING:Q08602 PRIDE:Q08602 Ensembl:ENSRNOT00000048455
GeneID:58983 KEGG:rno:58983 UCSC:RGD:621697 InParanoid:Q08602
EvolutionaryTrace:Q08602 NextBio:611680 Genevestigator:Q08602
GermOnline:ENSRNOG00000030483 Uniprot:Q08602
Length = 567
Score = 120 (47.3 bits), Expect = 0.00043, P = 0.00043
Identities = 54/223 (24%), Positives = 93/223 (41%)
Query: 93 LRQYKTPGNFSGKSQDDTLAIEVMIHSKALLLLSCDFATAWNSRKLIV-------SNKRL 145
L Q T F K Q L V+ + +L + DFAT WN R+ ++ S +
Sbjct: 27 LYQSATQAVFQ-KRQAGELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEES 85
Query: 146 LPILMDELHLSALVLSYSPKSEQAWSHRRWVINMISRNCSTLQWIIERESELVEKIAERS 205
++ EL L +PKS W HR W+++ + W RE EL + E
Sbjct: 86 AALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEP----NWA--RELELCARFLEAD 139
Query: 206 KMNYRAWNHRCWLVSFMTREQVLDELKKSRNWSGLHVADNSCFHYRRRLMLRNLEGFCYT 265
+ N+ W++R + V+ +EL + + + ++ S +HYR L L L
Sbjct: 140 ERNFHCWDYRRF-VAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCL-LPQLHP---Q 194
Query: 266 QDNNSSGYFVETYQIWKEELDWNESLIKQYVGREALWLHRRFL 308
D+ G E + +EL+ ++ ++ W + R+L
Sbjct: 195 PDSGPQGRLPENVLL--KELELVQNAFFTDPNDQSAWFYHRWL 235
>TAIR|locus:2153015 [details] [associations]
symbol:RGTA2 "RAB geranylgeranyl transferase alpha
subunit 2" species:3702 "Arabidopsis thaliana" [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0008318 "protein prenyltransferase
activity" evidence=IEA] [GO:0018342 "protein prenylation"
evidence=IEA] InterPro:IPR001611 InterPro:IPR002088 Pfam:PF01239
PROSITE:PS51147 PROSITE:PS51450 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AB016871 eggNOG:COG5536
GO:GO:0008318 GO:GO:0018342 HSSP:Q08602 HOGENOM:HOG000030513
ProtClustDB:CLSN2686399 IPI:IPI00539643 RefSeq:NP_198997.1
UniGene:At.55309 ProteinModelPortal:Q9FJ32 SMR:Q9FJ32 PaxDb:Q9FJ32
PRIDE:Q9FJ32 EnsemblPlants:AT5G41820.1 GeneID:834187
KEGG:ath:AT5G41820 TAIR:At5g41820 InParanoid:Q9FJ32 OMA:IYSAWHY
PhylomeDB:Q9FJ32 Genevestigator:Q9FJ32 Uniprot:Q9FJ32
Length = 687
Score = 118 (46.6 bits), Expect = 0.00092, P = 0.00092
Identities = 52/213 (24%), Positives = 99/213 (46%)
Query: 119 SKALLLLSCDFATAWNSRKLIV-------SNKRLLPILMDE-LHLSALVLSYSPKSEQAW 170
S LL+ + +F TAWN KL S+ L+ ++DE L + L + KS AW
Sbjct: 46 SAKLLITNPEFYTAWNYPKLAFESRLDEDSDPSLVNSIIDEELGVVQNALERNVKSYGAW 105
Query: 171 SHRRWVINMISRNCSTL----QWIIERESELVEKIAERSK----MNYRAWNHRCWLVSFM 222
HR+WV++ +L Q + + + + +K + + N+ AWN+R ++V +
Sbjct: 106 YHRKWVLSKKGHYYPSLENELQLLNDYQKQAHQKQDDEKQDDPSRNFHAWNYRRFVVE-L 164
Query: 223 TREQVLDELKKSRNW-SGLHVADNSCFHYRRRLMLRNLEGFCYTQDNNSSGYFVETYQIW 281
T+ DEL+ + + S + S +HYR +++ +L + G+ + +
Sbjct: 165 TKTSEEDELQYTTDMISDISFTIYSAWHYRS-VLVSSLVA------KKADGFMPK--ETI 215
Query: 282 KEELDWNESLIKQYVGREALWLHRRFLSMYLIK 314
+ ELD+ S I +++ W + +L +K
Sbjct: 216 RRELDYVHSAIFTLEEKQSGWFYYLWLLDQTVK 248
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.133 0.410 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 423 411 0.00080 118 3 11 22 0.36 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 40
No. of states in DFA: 627 (67 KB)
Total size of DFA: 308 KB (2155 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 31.30u 0.09s 31.39t Elapsed: 00:00:01
Total cpu time: 31.30u 0.09s 31.39t Elapsed: 00:00:01
Start: Sat May 11 02:34:25 2013 End: Sat May 11 02:34:26 2013