Query 014518
Match_columns 423
No_of_seqs 113 out of 450
Neff 7.0
Searched_HMMs 46136
Date Fri Mar 29 05:55:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014518.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014518hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF06813 Nodulin-like: Nodulin 100.0 3.7E-67 8E-72 503.8 6.3 248 15-262 1-250 (250)
2 PTZ00207 hypothetical protein; 100.0 2.5E-62 5.3E-67 520.5 2.5 363 13-420 24-417 (591)
3 TIGR00890 2A0111 Oxalate/Forma 99.6 5.6E-18 1.2E-22 167.7 -5.5 148 14-168 1-149 (377)
4 KOG2504 Monocarboxylate transp 99.4 2.9E-14 6.3E-19 150.9 -2.6 178 15-201 44-226 (509)
5 PRK09556 uhpT sugar phosphate 99.2 5.5E-13 1.2E-17 139.1 -2.3 131 31-163 44-176 (467)
6 TIGR00881 2A0104 phosphoglycer 99.2 2E-12 4.3E-17 128.1 -1.0 125 31-162 10-136 (379)
7 TIGR02332 HpaX 4-hydroxyphenyl 99.2 6.7E-13 1.5E-17 136.5 -5.4 145 13-164 4-151 (412)
8 TIGR00895 2A0115 benzoate tran 99.1 5.8E-12 1.3E-16 125.8 -0.8 147 12-165 12-161 (398)
9 PLN00028 nitrate transmembrane 99.1 5.3E-12 1.2E-16 132.4 -1.6 138 16-161 36-175 (476)
10 TIGR00893 2A0114 d-galactonate 99.1 9.2E-13 2E-17 130.5 -8.7 128 32-166 10-139 (399)
11 TIGR00892 2A0113 monocarboxyla 99.1 6.2E-12 1.3E-16 131.2 -3.0 145 13-164 15-162 (455)
12 PRK11663 regulatory protein Uh 99.1 3.2E-12 7E-17 132.1 -5.8 130 30-166 37-168 (434)
13 TIGR00886 2A0108 nitrite extru 99.0 1.4E-11 3.1E-16 122.7 -3.2 126 29-161 14-142 (366)
14 PRK11551 putative 3-hydroxyphe 99.0 4.6E-12 1E-16 128.7 -7.5 147 10-163 8-157 (406)
15 PRK11273 glpT sn-glycerol-3-ph 99.0 9.1E-12 2E-16 129.4 -6.7 151 9-163 21-174 (452)
16 PRK03699 putative transporter; 99.0 1.3E-11 2.8E-16 125.7 -6.4 146 12-164 2-150 (394)
17 PRK09705 cynX putative cyanate 98.9 5.9E-11 1.3E-15 121.2 -2.7 123 33-162 26-149 (393)
18 PRK03545 putative arabinose tr 98.9 3.2E-11 7E-16 122.4 -5.0 142 13-161 5-149 (390)
19 PRK12307 putative sialic acid 98.9 3.9E-11 8.5E-16 122.7 -5.2 145 13-164 14-161 (426)
20 TIGR00712 glpT glycerol-3-phos 98.9 5.7E-11 1.2E-15 122.8 -5.2 149 12-164 22-173 (438)
21 TIGR00894 2A0114euk Na(+)-depe 98.8 1.8E-10 3.8E-15 119.8 -5.1 117 45-166 70-188 (465)
22 TIGR00710 efflux_Bcr_CflA drug 98.8 7.3E-11 1.6E-15 118.1 -7.9 143 14-164 4-148 (385)
23 TIGR00896 CynX cyanate transpo 98.8 4.6E-10 9.9E-15 112.3 -3.0 121 33-161 17-138 (355)
24 TIGR00891 2A0112 putative sial 98.8 4.3E-10 9.3E-15 112.9 -3.8 151 11-168 6-159 (405)
25 TIGR00897 2A0118 polyol permea 98.7 5E-10 1.1E-14 114.4 -4.0 146 13-164 13-160 (402)
26 TIGR00879 SP MFS transporter, 98.7 9.9E-10 2.1E-14 112.0 -2.5 127 35-165 47-183 (481)
27 TIGR00898 2A0119 cation transp 98.7 2.3E-10 5E-15 120.0 -9.7 125 30-161 103-232 (505)
28 TIGR00711 efflux_EmrB drug res 98.6 1.9E-09 4E-14 111.9 -3.5 126 34-166 20-147 (485)
29 TIGR00903 2A0129 major facilit 98.5 1.9E-09 4.1E-14 109.7 -6.4 122 32-162 7-131 (368)
30 TIGR00885 fucP L-fucose:H+ sym 98.5 2.8E-09 6.1E-14 109.9 -6.7 138 28-169 14-154 (410)
31 PRK10473 multidrug efflux syst 98.5 3.8E-09 8.3E-14 107.0 -6.5 121 32-159 19-141 (392)
32 PRK10091 MFS transport protein 98.4 7.6E-09 1.6E-13 104.9 -4.8 121 33-160 20-142 (382)
33 COG2223 NarK Nitrate/nitrite t 98.4 6.1E-08 1.3E-12 98.8 1.7 139 15-161 12-155 (417)
34 PF07690 MFS_1: Major Facilita 98.4 4.9E-09 1.1E-13 103.0 -6.3 128 35-169 15-145 (352)
35 TIGR00900 2A0121 H+ Antiporter 98.4 1.1E-09 2.4E-14 107.9 -11.2 121 42-164 25-147 (365)
36 PRK14995 methyl viologen resis 98.4 1.1E-08 2.5E-13 107.7 -4.3 148 14-168 3-154 (495)
37 PRK10213 nepI ribonucleoside t 98.4 6E-09 1.3E-13 106.6 -6.9 144 11-161 14-160 (394)
38 PRK11102 bicyclomycin/multidru 98.4 2.2E-09 4.7E-14 107.7 -10.1 122 33-161 8-131 (377)
39 TIGR00887 2A0109 phosphate:H+ 98.4 2.2E-08 4.7E-13 105.6 -3.9 115 47-162 52-168 (502)
40 PRK15034 nitrate/nitrite trans 98.4 4.4E-08 9.6E-13 102.6 -2.0 139 18-159 35-177 (462)
41 COG2271 UhpC Sugar phosphate p 98.3 1.1E-07 2.3E-12 97.2 0.2 125 34-165 47-173 (448)
42 PRK05122 major facilitator sup 98.3 1E-07 2.3E-12 96.6 0.0 143 14-157 15-160 (399)
43 PRK11043 putative transporter; 98.3 1.2E-08 2.7E-13 103.6 -6.9 137 15-158 5-143 (401)
44 PRK10504 putative transporter; 98.3 5.2E-08 1.1E-12 101.3 -3.2 125 30-161 24-150 (471)
45 PRK15075 citrate-proton sympor 98.3 8.6E-08 1.9E-12 99.1 -1.5 139 13-158 11-166 (434)
46 PRK12382 putative transporter; 98.3 2.6E-07 5.7E-12 93.6 1.1 128 32-159 32-162 (392)
47 PRK03893 putative sialic acid 98.3 2.5E-08 5.5E-13 104.1 -6.6 150 13-169 16-168 (496)
48 cd06174 MFS The Major Facilita 98.2 7E-08 1.5E-12 94.1 -3.1 133 31-170 14-148 (352)
49 TIGR00805 oat sodium-independe 98.2 1.3E-07 2.9E-12 103.0 -2.0 127 34-160 51-223 (633)
50 PRK03633 putative MFS family t 98.2 6.8E-08 1.5E-12 97.8 -4.0 121 35-162 25-147 (381)
51 PRK10406 alpha-ketoglutarate t 98.2 2.5E-07 5.5E-12 95.5 -1.1 142 8-149 13-164 (432)
52 PRK10133 L-fucose transporter; 98.2 6.4E-08 1.4E-12 100.7 -5.7 128 33-164 43-172 (438)
53 KOG2532 Permease of the major 98.2 1.6E-07 3.5E-12 98.7 -2.9 114 43-161 65-180 (466)
54 TIGR01299 synapt_SV2 synaptic 98.1 6.4E-08 1.4E-12 107.0 -7.7 177 13-196 163-355 (742)
55 TIGR00883 2A0106 metabolite-pr 98.1 3.3E-07 7.1E-12 91.2 -2.0 131 32-162 9-149 (394)
56 PF00083 Sugar_tr: Sugar (and 98.0 7.7E-07 1.7E-11 91.8 -0.9 140 49-192 44-188 (451)
57 KOG2533 Permease of the major 98.0 2.9E-06 6.4E-11 89.8 2.1 121 42-170 72-195 (495)
58 PRK15402 multidrug efflux syst 98.0 5.1E-07 1.1E-11 92.0 -3.6 143 12-161 8-153 (406)
59 PRK10054 putative transporter; 97.9 5.7E-07 1.2E-11 92.0 -3.9 145 13-165 6-152 (395)
60 PRK11646 multidrug resistance 97.9 4E-07 8.7E-12 93.3 -5.5 144 14-166 11-156 (400)
61 TIGR00899 2A0120 sugar efflux 97.8 7.8E-07 1.7E-11 88.7 -4.7 117 36-160 18-140 (375)
62 PRK11652 emrD multidrug resist 97.8 7.2E-07 1.6E-11 90.5 -5.2 136 16-158 7-145 (394)
63 PRK08633 2-acyl-glycerophospho 97.8 9.6E-07 2.1E-11 101.7 -5.3 143 14-161 9-155 (1146)
64 PRK10077 xylE D-xylose transpo 97.8 3.1E-06 6.7E-11 87.9 -1.1 131 32-162 25-173 (479)
65 KOG2563 Permease of the major 97.7 6.7E-06 1.5E-10 84.8 -0.5 137 10-148 38-179 (480)
66 TIGR00710 efflux_Bcr_CflA drug 97.6 3E-06 6.5E-11 84.7 -4.3 135 30-166 220-356 (385)
67 PRK09528 lacY galactoside perm 97.6 6.1E-06 1.3E-10 84.7 -2.4 181 14-199 11-194 (420)
68 cd06174 MFS The Major Facilita 97.5 8.2E-06 1.8E-10 79.5 -2.5 134 30-170 189-326 (352)
69 TIGR00879 SP MFS transporter, 97.5 1.1E-05 2.3E-10 82.3 -2.1 138 32-170 300-444 (481)
70 PRK15403 multidrug efflux syst 97.5 4.3E-06 9.3E-11 86.2 -5.2 125 31-162 31-157 (413)
71 TIGR00806 rfc RFC reduced fola 97.5 5.2E-06 1.1E-10 87.0 -5.4 138 18-164 29-169 (511)
72 TIGR00924 yjdL_sub1_fam amino 97.4 3.9E-05 8.4E-10 80.8 0.7 124 36-166 31-162 (475)
73 PRK06814 acylglycerophosphoeth 97.4 6.4E-06 1.4E-10 95.3 -5.7 148 12-165 9-164 (1140)
74 TIGR00711 efflux_EmrB drug res 97.4 2.7E-05 5.8E-10 80.8 -1.0 126 42-170 282-409 (485)
75 PRK10207 dipeptide/tripeptide 97.4 9.7E-05 2.1E-09 78.2 3.2 141 14-160 11-158 (489)
76 PRK10489 enterobactin exporter 97.4 1.2E-05 2.6E-10 82.4 -3.8 149 38-193 245-397 (417)
77 PRK10489 enterobactin exporter 97.4 2.7E-06 5.8E-11 87.2 -9.0 124 34-160 35-161 (417)
78 COG0738 FucP Fucose permease [ 97.3 4.8E-05 1E-09 77.7 -0.2 130 36-169 33-164 (422)
79 PRK10642 proline/glycine betai 97.3 1.4E-05 3E-10 84.2 -4.6 163 28-195 262-429 (490)
80 PRK15462 dipeptide/tripeptide 97.3 0.00017 3.6E-09 76.6 3.6 142 17-164 9-157 (493)
81 PRK14995 methyl viologen resis 97.3 5E-05 1.1E-09 80.1 -0.6 127 39-169 283-411 (495)
82 PRK11551 putative 3-hydroxyphe 97.3 2.2E-05 4.7E-10 79.8 -3.5 133 31-170 235-369 (406)
83 PRK09584 tppB putative tripept 97.2 7.5E-05 1.6E-09 79.2 -0.2 127 33-165 38-170 (500)
84 PRK15011 sugar efflux transpor 97.2 2.1E-05 4.5E-10 80.2 -4.3 126 31-163 231-358 (393)
85 PLN00028 nitrate transmembrane 97.2 9.6E-05 2.1E-09 77.7 0.6 162 29-200 265-437 (476)
86 PRK10642 proline/glycine betai 97.2 2.6E-05 5.7E-10 82.1 -3.8 133 18-154 17-163 (490)
87 PRK03545 putative arabinose tr 97.2 3.1E-05 6.7E-10 78.6 -3.3 115 39-160 229-344 (390)
88 PRK11128 putative 3-phenylprop 97.2 3.2E-05 7E-10 78.4 -3.4 109 41-159 29-142 (382)
89 TIGR00902 2A0127 phenyl propri 97.2 3.2E-05 7E-10 78.5 -3.5 112 40-161 28-144 (382)
90 PRK09874 drug efflux system pr 97.1 6E-05 1.3E-09 76.2 -2.1 121 34-162 32-159 (408)
91 PRK10406 alpha-ketoglutarate t 97.1 3.1E-05 6.7E-10 80.0 -4.3 120 31-153 258-380 (432)
92 PRK11195 lysophospholipid tran 97.1 1.4E-05 2.9E-10 81.9 -7.3 132 14-157 3-136 (393)
93 TIGR00897 2A0118 polyol permea 97.1 3E-05 6.6E-10 79.2 -4.9 137 30-169 236-374 (402)
94 TIGR00890 2A0111 Oxalate/Forma 97.0 9.2E-05 2E-09 73.1 -1.5 124 40-168 229-354 (377)
95 TIGR00889 2A0110 nucleoside tr 97.0 2.5E-05 5.3E-10 80.8 -5.8 175 16-196 211-403 (418)
96 TIGR00880 2_A_01_02 Multidrug 97.0 2.3E-05 5E-10 65.8 -5.7 102 61-169 8-111 (141)
97 PRK09952 shikimate transporter 97.0 0.00023 4.9E-09 73.9 0.5 147 13-162 18-178 (438)
98 PRK15402 multidrug efflux syst 96.9 5.8E-05 1.3E-09 76.9 -4.1 139 31-171 230-370 (406)
99 TIGR00883 2A0106 metabolite-pr 96.9 0.00025 5.4E-09 70.5 0.5 121 27-151 230-354 (394)
100 TIGR00901 2A0125 AmpG-related 96.9 5.7E-05 1.2E-09 75.4 -4.3 123 39-166 11-140 (356)
101 PRK09528 lacY galactoside perm 96.9 8.2E-05 1.8E-09 76.3 -3.3 157 35-198 246-406 (420)
102 PRK10077 xylE D-xylose transpo 96.9 7.4E-05 1.6E-09 77.6 -3.7 131 36-168 291-423 (479)
103 PRK03893 putative sialic acid 96.9 0.00035 7.5E-09 73.0 1.3 122 38-165 297-422 (496)
104 TIGR00901 2A0125 AmpG-related 96.9 0.00011 2.4E-09 73.3 -2.5 116 38-154 232-354 (356)
105 TIGR00902 2A0127 phenyl propri 96.9 7.3E-05 1.6E-09 75.9 -3.8 143 16-169 208-353 (382)
106 PRK15075 citrate-proton sympor 96.8 9E-05 2E-09 76.6 -3.5 119 30-152 252-374 (434)
107 TIGR00899 2A0120 sugar efflux 96.8 8.4E-05 1.8E-09 74.0 -3.8 118 40-164 224-342 (375)
108 PRK09556 uhpT sugar phosphate 96.8 3.1E-05 6.8E-10 80.9 -7.4 123 31-158 273-398 (467)
109 TIGR00882 2A0105 oligosacchari 96.8 0.00033 7.1E-09 71.2 0.1 146 16-164 5-152 (396)
110 PRK11102 bicyclomycin/multidru 96.8 7.6E-05 1.6E-09 74.8 -4.5 125 32-160 210-338 (377)
111 TIGR02718 sider_RhtX_FptX side 96.7 0.00011 2.3E-09 74.7 -4.1 149 16-168 211-363 (390)
112 TIGR00887 2A0109 phosphate:H+ 96.6 0.00025 5.4E-09 74.9 -2.0 137 30-170 302-453 (502)
113 TIGR00900 2A0121 H+ Antiporter 96.6 0.00023 5E-09 70.0 -2.2 121 38-164 233-356 (365)
114 PRK11010 ampG muropeptide tran 96.6 0.00013 2.8E-09 77.1 -4.3 175 16-197 225-404 (491)
115 TIGR00886 2A0108 nitrite extru 96.6 0.00045 9.7E-09 68.7 -0.7 121 32-157 241-365 (366)
116 PRK11043 putative transporter; 96.6 0.00033 7.2E-09 71.1 -1.7 135 28-164 215-350 (401)
117 PRK10504 putative transporter; 96.5 0.00026 5.6E-09 73.6 -2.9 147 14-166 261-414 (471)
118 TIGR00891 2A0112 putative sial 96.5 0.00081 1.8E-08 67.4 0.3 125 37-168 260-387 (405)
119 PRK11273 glpT sn-glycerol-3-ph 96.4 0.00014 3.1E-09 75.6 -5.4 132 31-167 268-405 (452)
120 PRK11010 ampG muropeptide tran 96.4 0.00015 3.2E-09 76.8 -5.4 154 7-168 5-166 (491)
121 PRK11128 putative 3-phenylprop 96.4 0.00025 5.5E-09 71.8 -3.8 132 10-151 200-334 (382)
122 PRK03699 putative transporter; 96.4 0.00016 3.6E-09 73.5 -5.2 128 31-165 220-349 (394)
123 PRK15011 sugar efflux transpor 96.4 0.00032 6.9E-09 71.5 -3.1 129 8-147 10-141 (393)
124 PRK09952 shikimate transporter 96.3 0.00023 5E-09 73.9 -4.6 130 32-164 266-399 (438)
125 TIGR00895 2A0115 benzoate tran 96.3 0.00027 5.9E-09 70.4 -4.1 125 30-161 264-390 (398)
126 PRK12307 putative sialic acid 96.3 0.00069 1.5E-08 69.2 -1.2 127 29-160 244-372 (426)
127 TIGR00893 2A0114 d-galactonate 96.3 0.00018 4E-09 71.0 -5.3 129 33-169 232-371 (399)
128 PRK08633 2-acyl-glycerophospho 96.3 0.00088 1.9E-08 77.4 -0.9 119 37-162 254-375 (1146)
129 PF00083 Sugar_tr: Sugar (and 96.1 0.00065 1.4E-08 70.0 -2.5 136 33-171 270-411 (451)
130 KOG3764 Vesicular amine transp 96.0 0.00043 9.3E-09 70.8 -4.2 152 42-202 95-254 (464)
131 PRK11652 emrD multidrug resist 96.0 0.00063 1.4E-08 68.9 -3.3 125 40-168 232-357 (394)
132 PRK05122 major facilitator sup 95.9 0.00021 4.5E-09 72.4 -7.0 97 62-165 260-358 (399)
133 KOG0569 Permease of the major 95.9 0.00021 4.6E-09 75.3 -7.3 152 38-193 41-202 (485)
134 PRK11902 ampG muropeptide tran 95.9 0.00049 1.1E-08 70.3 -4.7 121 37-164 231-358 (402)
135 PF07690 MFS_1: Major Facilita 95.9 0.00018 3.9E-09 70.5 -7.7 124 33-160 223-350 (352)
136 PRK10473 multidrug efflux syst 95.8 0.0012 2.6E-08 66.8 -2.1 63 37-99 224-288 (392)
137 COG2814 AraJ Arabinose efflux 95.8 0.006 1.3E-07 62.8 2.7 115 32-153 29-145 (394)
138 TIGR01299 synapt_SV2 synaptic 95.7 0.00027 5.9E-09 78.5 -7.7 101 61-168 605-707 (742)
139 KOG0255 Synaptic vesicle trans 95.7 0.00094 2E-08 70.7 -3.5 131 33-172 99-232 (521)
140 PRK09705 cynX putative cyanate 95.7 0.0006 1.3E-08 69.6 -4.9 122 31-160 220-344 (393)
141 PRK10213 nepI ribonucleoside t 95.6 0.0013 2.9E-08 67.2 -2.9 131 33-170 233-365 (394)
142 PRK15034 nitrate/nitrite trans 95.5 0.00061 1.3E-08 71.7 -5.6 105 63-168 299-425 (462)
143 PRK11902 ampG muropeptide tran 95.5 0.00083 1.8E-08 68.6 -4.6 120 41-166 25-151 (402)
144 TIGR00889 2A0110 nucleoside tr 95.4 0.0034 7.4E-08 64.9 -0.6 62 35-96 22-85 (418)
145 PRK06814 acylglycerophosphoeth 95.4 0.00095 2.1E-08 77.4 -5.2 130 39-168 249-393 (1140)
146 KOG0254 Predicted transporter 95.3 0.0013 2.8E-08 69.9 -4.3 136 51-194 89-228 (513)
147 TIGR00788 fbt folate/biopterin 95.2 0.0043 9.3E-08 65.3 -0.5 155 27-187 36-201 (468)
148 TIGR00792 gph sugar (Glycoside 95.2 0.00088 1.9E-08 68.6 -5.6 114 45-165 252-378 (437)
149 PRK09874 drug efflux system pr 95.0 0.0029 6.3E-08 64.0 -2.5 91 67-164 275-366 (408)
150 TIGR00894 2A0114euk Na(+)-depe 95.0 0.002 4.3E-08 67.0 -4.0 135 32-170 277-421 (465)
151 KOG1330 Sugar transporter/spin 94.9 0.0045 9.8E-08 64.5 -1.4 155 38-200 55-214 (493)
152 PRK03633 putative MFS family t 94.8 0.0024 5.2E-08 64.6 -3.6 128 23-163 210-339 (381)
153 PRK12382 putative transporter; 94.7 0.00086 1.9E-08 67.9 -7.3 116 44-168 244-361 (392)
154 PRK09848 glucuronide transport 94.6 0.0014 2.9E-08 68.1 -6.2 115 42-161 255-378 (448)
155 TIGR00881 2A0104 phosphoglycer 94.6 0.011 2.4E-07 58.3 0.5 127 34-165 234-366 (379)
156 PF06609 TRI12: Fungal trichot 94.5 0.011 2.3E-07 64.2 0.1 222 14-244 40-274 (599)
157 TIGR00882 2A0105 oligosacchari 94.5 0.0036 7.8E-08 63.6 -3.4 123 35-164 238-363 (396)
158 TIGR00788 fbt folate/biopterin 94.3 0.0071 1.5E-07 63.7 -1.7 120 44-163 281-405 (468)
159 PRK11195 lysophospholipid tran 94.0 0.014 3E-07 59.7 -0.2 117 41-165 231-350 (393)
160 TIGR00792 gph sugar (Glycoside 94.0 0.0023 4.9E-08 65.5 -6.0 123 38-161 22-152 (437)
161 PF03825 Nuc_H_symport: Nucleo 93.9 0.0086 1.9E-07 61.9 -2.0 150 13-169 206-362 (400)
162 KOG0252 Inorganic phosphate tr 93.9 0.032 6.8E-07 58.4 2.0 122 47-169 80-207 (538)
163 PRK15403 multidrug efflux syst 93.8 0.0066 1.4E-07 62.5 -3.1 135 10-154 213-356 (413)
164 PRK10133 L-fucose transporter; 93.6 0.017 3.8E-07 60.1 -0.4 111 43-162 287-398 (438)
165 PF03092 BT1: BT1 family; Int 93.6 0.0082 1.8E-07 62.7 -2.9 153 39-195 13-175 (433)
166 TIGR00898 2A0119 cation transp 93.5 0.005 1.1E-07 64.6 -4.6 95 67-166 372-467 (505)
167 TIGR00892 2A0113 monocarboxyla 93.5 0.0096 2.1E-07 62.2 -2.6 119 38-161 263-385 (455)
168 PRK11663 regulatory protein Uh 93.3 0.0093 2E-07 61.7 -3.1 123 34-164 261-392 (434)
169 PRK10091 MFS transport protein 93.2 0.0057 1.2E-07 61.9 -4.7 59 39-97 223-282 (382)
170 TIGR00896 CynX cyanate transpo 92.9 0.014 3E-07 58.2 -2.4 124 28-159 209-336 (355)
171 TIGR00712 glpT glycerol-3-phos 92.4 0.027 5.8E-07 58.3 -1.1 125 32-161 267-397 (438)
172 TIGR01272 gluP glucose/galacto 92.4 0.017 3.7E-07 57.4 -2.5 110 45-163 172-282 (310)
173 PRK10429 melibiose:sodium symp 91.7 0.0075 1.6E-07 63.3 -6.3 76 51-128 266-342 (473)
174 PF06609 TRI12: Fungal trichot 91.6 0.011 2.4E-07 64.0 -5.2 152 16-172 309-468 (599)
175 COG2270 Permeases of the major 91.5 0.037 8E-07 57.2 -1.2 119 43-169 280-400 (438)
176 KOG0254 Predicted transporter 91.2 0.038 8.2E-07 58.7 -1.6 154 11-171 291-457 (513)
177 COG2223 NarK Nitrate/nitrite t 90.1 0.019 4.2E-07 59.1 -4.7 131 35-169 237-373 (417)
178 PF05977 MFS_3: Transmembrane 89.2 0.03 6.4E-07 60.1 -4.4 118 42-166 245-368 (524)
179 TIGR02332 HpaX 4-hydroxyphenyl 89.0 0.056 1.2E-06 55.6 -2.5 131 27-165 253-389 (412)
180 TIGR00903 2A0129 major facilit 88.9 0.11 2.5E-06 52.8 -0.2 149 10-169 187-340 (368)
181 PRK10207 dipeptide/tripeptide 88.4 0.012 2.6E-07 62.4 -8.0 100 66-167 325-437 (489)
182 TIGR02718 sider_RhtX_FptX side 88.4 0.011 2.4E-07 59.9 -8.1 70 353-422 200-272 (390)
183 PRK09669 putative symporter Ya 87.8 0.037 8E-07 57.4 -4.7 106 56-166 269-387 (444)
184 PF11700 ATG22: Vacuole efflux 87.8 0.24 5.2E-06 52.6 1.3 133 8-143 274-413 (477)
185 PF13347 MFS_2: MFS/sugar tran 87.5 0.044 9.6E-07 56.5 -4.3 151 6-164 216-381 (428)
186 COG2814 AraJ Arabinose efflux 87.2 0.058 1.3E-06 55.6 -3.6 135 26-167 222-361 (394)
187 PRK09848 glucuronide transport 86.7 0.011 2.4E-07 61.3 -9.4 112 39-150 32-151 (448)
188 PRK09669 putative symporter Ya 86.7 0.086 1.9E-06 54.6 -2.7 120 42-162 36-163 (444)
189 PRK11646 multidrug resistance 86.5 0.041 8.8E-07 56.4 -5.3 112 42-161 235-349 (400)
190 TIGR01301 GPH_sucrose GPH fami 85.8 0.066 1.4E-06 56.8 -4.2 137 27-163 12-170 (477)
191 PRK10054 putative transporter; 85.5 0.17 3.7E-06 51.7 -1.3 98 45-149 238-338 (395)
192 PF05631 DUF791: Protein of un 85.1 0.13 2.8E-06 52.3 -2.3 85 31-128 54-139 (354)
193 KOG2533 Permease of the major 82.6 0.11 2.3E-06 55.5 -4.3 143 22-171 279-430 (495)
194 COG3104 PTR2 Dipeptide/tripept 82.5 0.62 1.3E-05 49.3 1.4 149 41-197 51-207 (498)
195 KOG0569 Permease of the major 82.0 0.1 2.3E-06 55.3 -4.6 144 24-169 279-428 (485)
196 PF13347 MFS_2: MFS/sugar tran 81.7 0.093 2E-06 54.1 -5.1 158 39-197 25-200 (428)
197 KOG0252 Inorganic phosphate tr 80.2 0.56 1.2E-05 49.4 0.1 141 4-149 294-446 (538)
198 KOG2615 Permease of the major 76.1 0.61 1.3E-05 48.1 -1.0 119 29-158 41-169 (451)
199 KOG0253 Synaptic vesicle trans 74.8 0.87 1.9E-05 46.9 -0.3 163 18-191 80-246 (528)
200 COG2807 CynX Cyanate permease 73.9 0.85 1.8E-05 46.6 -0.6 125 35-168 31-157 (395)
201 KOG3098 Uncharacterized conser 72.2 0.85 1.9E-05 48.1 -1.1 153 9-161 234-404 (461)
202 PF05977 MFS_3: Transmembrane 69.0 0.82 1.8E-05 49.1 -2.1 93 47-142 41-135 (524)
203 KOG2816 Predicted transporter 69.0 2 4.3E-05 45.5 0.7 146 11-169 238-390 (463)
204 PRK10429 melibiose:sodium symp 68.5 0.45 9.8E-06 49.8 -4.2 123 41-164 32-162 (473)
205 TIGR00805 oat sodium-independe 67.3 3.9 8.5E-05 44.9 2.7 85 8-93 323-412 (633)
206 COG0477 ProP Permeases of the 65.0 0.84 1.8E-05 42.0 -2.7 110 39-153 25-139 (338)
207 KOG2504 Monocarboxylate transp 63.9 0.6 1.3E-05 50.0 -4.4 132 23-161 305-440 (509)
208 PF01306 LacY_symp: LacY proto 63.7 0.16 3.4E-06 52.8 -8.5 155 35-197 243-402 (412)
209 PF03137 OATP: Organic Anion T 63.5 2.3 5.1E-05 45.8 0.0 75 22-98 11-86 (539)
210 PRK11462 putative transporter; 62.6 0.55 1.2E-05 49.3 -4.9 24 67-90 280-303 (460)
211 COG2271 UhpC Sugar phosphate p 60.9 1 2.3E-05 46.8 -3.1 100 1-103 238-344 (448)
212 COG2211 MelB Na+/melibiose sym 60.8 3.3 7.2E-05 43.8 0.6 78 45-127 264-344 (467)
213 TIGR00926 2A1704 Peptide:H+ sy 57.0 3.7 8E-05 45.4 0.2 59 42-100 14-74 (654)
214 PF12832 MFS_1_like: MFS_1 lik 55.5 7.3 0.00016 30.6 1.6 51 38-89 23-74 (77)
215 PRK09584 tppB putative tripept 53.2 0.31 6.7E-06 51.8 -8.8 100 69-168 339-441 (500)
216 PF05978 UNC-93: Ion channel r 52.8 3 6.5E-05 37.5 -1.2 89 67-164 54-143 (156)
217 TIGR00885 fucP L-fucose:H+ sym 43.5 5.2 0.00011 41.2 -1.3 92 67-167 286-377 (410)
218 KOG4686 Predicted sugar transp 42.3 11 0.00024 37.8 0.8 113 42-165 291-408 (459)
219 TIGR01272 gluP glucose/galacto 37.0 6.4 0.00014 39.0 -1.8 67 356-422 135-206 (310)
220 PF06779 DUF1228: Protein of u 35.3 24 0.00052 28.5 1.6 62 32-93 8-70 (85)
221 KOG4686 Predicted sugar transp 31.1 11 0.00025 37.7 -1.0 143 10-158 37-185 (459)
222 PF03825 Nuc_H_symport: Nucleo 29.7 25 0.00053 36.4 1.1 45 60-104 347-398 (400)
223 PF03209 PUCC: PUCC protein; 26.8 8 0.00017 40.2 -3.1 103 44-150 237-342 (403)
224 KOG2532 Permease of the major 25.6 7.7 0.00017 41.1 -3.6 147 20-171 260-419 (466)
225 KOG3626 Organic anion transpor 24.7 89 0.0019 35.1 4.3 75 4-79 381-458 (735)
226 PF01306 LacY_symp: LacY proto 23.6 15 0.00033 38.3 -1.8 64 34-97 26-92 (412)
227 TIGR00880 2_A_01_02 Multidrug 22.4 44 0.00095 27.0 1.1 38 56-93 92-130 (141)
228 TIGR00924 yjdL_sub1_fam amino 21.6 5 0.00011 42.3 -5.9 96 72-168 338-440 (475)
No 1
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=100.00 E-value=3.7e-67 Score=503.84 Aligned_cols=248 Identities=46% Similarity=0.937 Sum_probs=240.9
Q ss_pred cchhHHHHHHHHhhcccccccccchhhhhhccCcchhHHHhhhhccccccccccccchhhhhhhhHHHHHHHHhhhhhcc
Q 014518 15 RWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSVGFLAGSLCEVLPIWGALLVGALQNFIGY 94 (423)
Q Consensus 15 Rw~~l~a~~~i~l~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~g~~~G~l~D~~gP~~vl~iG~~~~~~Gy 94 (423)
||+++++++|+|+++|++|.||+||||||+++||||+|+|+|++++|+|.++|+++|+++|++|||+++++|++++++||
T Consensus 1 rW~~l~a~~~v~~~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G~~~G~l~d~~gp~~~l~iG~~~~~~GY 80 (250)
T PF06813_consen 1 RWLSLVASIWVQLCSGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFGILAGLLYDRFGPWVVLLIGAVLGFVGY 80 (250)
T ss_pred ChhhHHHHHHHHHhcCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhccHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCCCCCCCeeEeeccccchhhHHHHHHHHHhcCCCcc
Q 014518 95 GWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIHAPDHA 174 (423)
Q Consensus 95 ~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~~RG~vvgilk~~~GLSaaI~s~i~~~~f~~~~~ 174 (423)
+++|++++|+++++++|++|+|.+++++|++|+|||+++||+||||++||+|+|++|+++||||+||+++|+++|++|++
T Consensus 81 ~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~ 160 (250)
T PF06813_consen 81 GLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPS 160 (250)
T ss_pred HHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhHHHHhHHHHHHHHHHHHcCCChH
Confidence 99999999999878999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeeeechhhhhhhheeeEeccCCc--cccccCCCCceeehhHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHH
Q 014518 175 NLIFMVAVGPAMVVIALMFIIRPVGGH--RQVRPSDSSSFTFIYSVCLLLAAYLMGVMLVEDLVDLNHTVIIIFTVILFV 252 (423)
Q Consensus 175 ~fllfla~~~~~v~~~~~~fvr~~~~~--~~~~~~~~~~f~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~i~~~ 252 (423)
.|++|+++.|.++++++++|+|++|++ ++++++|+++|...+.+++.+++|+++++++++++++++..+....+++++
T Consensus 161 ~fll~la~~~~~v~l~~~~~vr~~~~~~~~~~~~~~~~~F~~~~~i~l~la~yLl~~~i~~~~~~~s~~~~~~~~~il~l 240 (250)
T PF06813_consen 161 SFLLFLAVLPAVVCLVAMFFVRPVPPSPSRTRQPSESKRFLFFFAIALALAIYLLVISILQNFVKLSRAARVIFAVILLL 240 (250)
T ss_pred HHHHHHHHHHHHHHHHHhhheeccCCccccccCcchhHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHH
Confidence 999999999999999999999998873 455677889999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhee
Q 014518 253 LLFIPIVIPI 262 (423)
Q Consensus 253 ll~~p~~v~~ 262 (423)
+|++|+.||+
T Consensus 241 lL~~Pl~i~~ 250 (250)
T PF06813_consen 241 LLLLPLAIPV 250 (250)
T ss_pred HHHhhhhccC
Confidence 9999999885
No 2
>PTZ00207 hypothetical protein; Provisional
Probab=100.00 E-value=2.5e-62 Score=520.55 Aligned_cols=363 Identities=18% Similarity=0.273 Sum_probs=297.8
Q ss_pred cCcchhHHHHHHHHhhcccccccccchhhhhhccCcchhHHHhhhhccccccccccccchhhhhhhhHHHHHHHHhhhhh
Q 014518 13 NNRWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSVGFLAGSLCEVLPIWGALLVGALQNFI 92 (423)
Q Consensus 13 ~~Rw~~l~a~~~i~l~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~g~~~G~l~D~~gP~~vl~iG~~~~~~ 92 (423)
.+||+++++++|+++|+|+.|.|++|+++||+++|+||+|+++++..+...+.+++|+|.++||+|||+++++|+++.++
T Consensus 24 ~~Rw~~lva~~~~~~~~g~~y~fsv~s~~L~~~lgls~~~l~~i~svg~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~i 103 (591)
T PTZ00207 24 PRRFALLVLGAFCSICTSFMYAFNLISGAMQARYNLTQRDLSTITTVGIAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCL 103 (591)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999998865544445566999999999999999999999999
Q ss_pred cceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCCCCCCCeeEeeccccchhhHHHHHHHHHhcCCC
Q 014518 93 GYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIHAPD 172 (423)
Q Consensus 93 Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~~RG~vvgilk~~~GLSaaI~s~i~~~~f~~~ 172 (423)
||+++|+++++.+. +++|++|++.++.|+|++++++++++++++|||++||+++|+++++.|+|++|+++++.+++.++
T Consensus 104 G~ll~ala~~~~i~-~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~~ 182 (591)
T PTZ00207 104 GTLLFALTFQEVIE-GSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFPSNRGAVVAIMKTFTGLGSAILGSIQLAFFSDN 182 (591)
T ss_pred HHHHHHHHhccccc-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999884 48999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeeeeechhhhhhhheeeEeccCCccc---c---ccCC-----------------CCceeehhHHHHHHHHHHHHH
Q 014518 173 HANLIFMVAVGPAMVVIALMFIIRPVGGHRQ---V---RPSD-----------------SSSFTFIYSVCLLLAAYLMGV 229 (423)
Q Consensus 173 ~~~fllfla~~~~~v~~~~~~fvr~~~~~~~---~---~~~~-----------------~~~f~~~~~~~~~l~~yl~~~ 229 (423)
.+.+++++++.+.+++++++.++|.||++.. + +++| .++|..++++++++++||+++
T Consensus 183 ~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~ 262 (591)
T PTZ00207 183 TSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQ 262 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999887642 1 1111 237889999999999999999
Q ss_pred HHHHhhhccCchhHHHHHHHHH-HHHHhhhhheeeeecccCCCChhhhhcCCCCCCCCCCCCCccccchhhccccccCCc
Q 014518 230 MLVEDLVDLNHTVIIIFTVILF-VLLFIPIVIPIILSFFLERTDPAEEALLSKPENMEPGKSNQETDEVILSEVEDEKPK 308 (423)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~i~~-~ll~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (423)
+++++|++++++.+..++++++ ++++.| ++++|.++++..++ +++ + +. +.. +..+++++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~v~~~lll~~p-~l~ip~~~~~~~~~-~~~-----~---~~-----~~~-----~~~~~~~~ 322 (591)
T PTZ00207 263 GALVAYLKLGSNFKVGFAVTVIVLTVIFP-FMAFPLTTFDGKRP-HDD-----S---DG-----KAK-----EHVEAGEE 322 (591)
T ss_pred HHHHHHhcccHHHHHHHHHHHHHHHHHHH-HHhhhHHHhccCCc-CCC-----c---cc-----ccc-----cccccccc
Confidence 9999999999999999999888 555556 34444433332211 000 0 00 000 00000000
Q ss_pred ccCccCcchhhhHHHHHHHHHHHHHhccc-eeec-ccCCCCCCCchhHHHHHHhhhHHHHHHHHHhcCCCCceeecchhh
Q 014518 309 DVDLLPASERRKRIAQLQARLFHAAAEGA-VRVK-RRRGPHRGEDFTLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQ 386 (423)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~p~~~~d~t~~q~l~t~dFWllf~~~~~g~G~Gl~~InN~gq 386 (423)
.+ ..+++ .+.+ ++..|++|+ |++|+|++.|||++|++++||+|+|++++||+||
T Consensus 323 -~~---------------------~~~~~~~~~~~~~~~P~~~~--t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~~q 378 (591)
T PTZ00207 323 -VS---------------------AAEDKVVETDVDYIAPQFQE--TFIEGLKTARLWCLLWSIFCCVGAHFVIIFNARF 378 (591)
T ss_pred -cc---------------------ccccccccccccCCCCCCcc--hHHHHHhchhHHHHHHHHHHhhCchheeeecHHH
Confidence 00 00000 0111 124588876 9999999999999999999999999999999999
Q ss_pred hhhhc-CC-CCc--ee-eeehhhHhhhhhccccccccee
Q 014518 387 MSQSL-GY-DNT--HI-FVSMISIWNFLGRVGGGYFSEI 420 (423)
Q Consensus 387 I~~al-g~-~~~--~~-~VsL~Si~n~~GRl~~G~~SD~ 420 (423)
|++|+ |+ .+. +. +|||+|||||+||+++|++|.+
T Consensus 379 I~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~ 417 (591)
T PTZ00207 379 IYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIW 417 (591)
T ss_pred HHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHH
Confidence 99999 77 334 44 9999999999999999999943
No 3
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.63 E-value=5.6e-18 Score=167.70 Aligned_cols=148 Identities=21% Similarity=0.288 Sum_probs=127.5
Q ss_pred CcchhHHHHHHHHhhcccccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhh
Q 014518 14 NRWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFI 92 (423)
Q Consensus 14 ~Rw~~l~a~~~i~l~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~ 92 (423)
|||..+++.+..+.+.|..|.++.+.|.+++.+|+|.+|.+.+..+..+|..+ .++.|.+.||+|+|.++.++.++..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~ 80 (377)
T TIGR00890 1 RWWYVLVGTVIMCFTSGYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGL 80 (377)
T ss_pred CeEEEeHHHHHHHHHhhHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHH
Confidence 57999999999999999999999999999999999999999999888899866 78899999999999999999999888
Q ss_pred cceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCCCCCCCeeEeeccccchhhHHHHHHHHHh
Q 014518 93 GYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMI 168 (423)
Q Consensus 93 Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~~RG~vvgilk~~~GLSaaI~s~i~~~~ 168 (423)
|+.+...+ +++|.+.+..++.|.|.+..+.++.....++||++||.+.++.....++++.+...+...+
T Consensus 81 ~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 149 (377)
T TIGR00890 81 GFTFYAIA-------DSLAALYLTYGLASAGVGIAYGIALNTAVKWFPDKRGLASGIIIGGYGLGSFILSPLITSV 149 (377)
T ss_pred HHHHHHHH-------HHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcCcccHHHHHHHHHhcchhHhHHHHHHHHH
Confidence 88653321 3567777777788888888888888888999999999999999999999887765554433
No 4
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.38 E-value=2.9e-14 Score=150.86 Aligned_cols=178 Identities=20% Similarity=0.291 Sum_probs=140.1
Q ss_pred cchhHHHHHHHH-hhcccccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhh
Q 014518 15 RWLVFVAAMWIQ-SCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFI 92 (423)
Q Consensus 15 Rw~~l~a~~~i~-l~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~ 92 (423)
-|.+.+++.+++ .+-|..|+|+++=+++++.++-+.+|.+.|+....-..++ |++.+.++|++|.|.+.++|+++.++
T Consensus 44 gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~ 123 (509)
T KOG2504|consen 44 GWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAAL 123 (509)
T ss_pred eeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHH
Confidence 489999998775 6779999999999999999999999988865433333333 99999999999999999999999999
Q ss_pred cceeeeeeeeCCCCCchHHH-HhhheeeecCCceeeehhhhhhhhhcCCCCCCCeeEeeccccchhhHHHHHHHHHhcCC
Q 014518 93 GYGWVWLIVTGRAPVLPLWA-MCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIHAP 171 (423)
Q Consensus 93 Gy~~~~l~~~g~i~~~~~~~-l~~f~~l~g~g~~~~~ta~l~t~~~nFP~~RG~vvgilk~~~GLSaaI~s~i~~~~f~~ 171 (423)
|+.+-.. ..++|+ +..|.++.|.|.++.+..+++..-..|+++|+.|.|+..+..|++..+|..+-.-+++.
T Consensus 124 g~~lssF-------~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~ 196 (509)
T KOG2504|consen 124 GLLLSSF-------ATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKKRALATGIAVSGTGVGTVVFPPLLKYLLSK 196 (509)
T ss_pred HHHHHHH-------HhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhHHHHHHHHhhhhccCCcceeeHHHHHHHHHHH
Confidence 9887111 124655 45588999999999999999999999999999999999999999999999888877743
Q ss_pred --CccceeeeeeechhhhhhhheeeEeccCCc
Q 014518 172 --DHANLIFMVAVGPAMVVIALMFIIRPVGGH 201 (423)
Q Consensus 172 --~~~~fllfla~~~~~v~~~~~~fvr~~~~~ 201 (423)
....++.+.++. +-++++....||.+.+
T Consensus 197 ~G~r~~~l~~~~~~--l~~~~~~~~~rp~~~~ 226 (509)
T KOG2504|consen 197 YGWRGALLIFGGIS--LNVLVAGALLRPLSPP 226 (509)
T ss_pred hCcHHHHHHHHHHH--HHHHHHHHHcCCCCcC
Confidence 333333333322 4455555666664433
No 5
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.24 E-value=5.5e-13 Score=139.13 Aligned_cols=131 Identities=15% Similarity=0.061 Sum_probs=104.8
Q ss_pred cccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCch
Q 014518 31 IGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLP 109 (423)
Q Consensus 31 t~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~ 109 (423)
..+.++.-.|++++.+|+|.+|+..+.++..++..+ .++.|.+.||+|+|.++.++.+...++.+.+.....+. ..+
T Consensus 44 ~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~--~~~ 121 (467)
T PRK09556 44 IRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSG--SVS 121 (467)
T ss_pred HhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcc--cch
Confidence 456688889999999999999999999888888866 78999999999999998887776555544433322222 236
Q ss_pred HHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHHH
Q 014518 110 LWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQ 163 (423)
Q Consensus 110 ~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s~ 163 (423)
++.+.++-++.|.+++....++.....++|| ++||.+.|+.....++++++-..
T Consensus 122 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~ 176 (467)
T PRK09556 122 LGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGG 176 (467)
T ss_pred HHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHH
Confidence 8888888888889888877888888889997 57999999999998898877543
No 6
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.19 E-value=2e-12 Score=128.08 Aligned_cols=125 Identities=16% Similarity=0.181 Sum_probs=106.6
Q ss_pred cccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCch
Q 014518 31 IGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLP 109 (423)
Q Consensus 31 t~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~ 109 (423)
....|+...|.+++++|+|.+|...+..+..++..+ .++.|.+.||+|+|.++.+|.+...++..++..+ ++
T Consensus 10 ~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-------~~ 82 (379)
T TIGR00881 10 VRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFS-------TS 82 (379)
T ss_pred hHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHh-------hh
Confidence 456677888999999999999999998888888866 7899999999999999999999988888765433 25
Q ss_pred HHHHhhheeeecCCceeeehhhhhhhhhcCCC-CCCCeeEeeccccchhhHHHH
Q 014518 110 LWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAILT 162 (423)
Q Consensus 110 ~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~-~RG~vvgilk~~~GLSaaI~s 162 (423)
+|.+.+..++.|.+.+..+.+......+++|+ +||.+.|+......+++.+-.
T Consensus 83 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 136 (379)
T TIGR00881 83 LWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLP 136 (379)
T ss_pred HHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHH
Confidence 67778888888898888888888888999985 799999999999888887765
No 7
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.17 E-value=6.7e-13 Score=136.47 Aligned_cols=145 Identities=8% Similarity=-0.081 Sum_probs=112.2
Q ss_pred cCcchhHHHHHHHHhhcc-cccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhh
Q 014518 13 NNRWLVFVAAMWIQSCAG-IGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQN 90 (423)
Q Consensus 13 ~~Rw~~l~a~~~i~l~~G-t~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~ 90 (423)
+.||.+++.....-.+.. -.+..+.-+|.|++.+|+|.+|..++..+..+|..+ .++.|.+.||+|+|.++.++.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~ 83 (412)
T TIGR02332 4 KLFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLW 83 (412)
T ss_pred eehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHH
Confidence 345665555555444433 356677788999999999999999998888888766 789999999999999999999998
Q ss_pred hhcceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCCC-CCCCeeEeeccccchhhHHHHHH
Q 014518 91 FIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAILTQV 164 (423)
Q Consensus 91 ~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~-~RG~vvgilk~~~GLSaaI~s~i 164 (423)
.++..+..++ ++++.+.+.-++.|.+.+....++.....++||. +||.+.|+.....+++..+-..+
T Consensus 84 ~~~~~~~~~~-------~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~ 151 (412)
T TIGR02332 84 GIASTATMFA-------TGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLIL 151 (412)
T ss_pred HHHHHHHHHh-------cCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888774331 2355667777788888887777777777889984 79999999998888877655333
No 8
>TIGR00895 2A0115 benzoate transport.
Probab=99.13 E-value=5.8e-12 Score=125.80 Aligned_cols=147 Identities=18% Similarity=0.146 Sum_probs=117.9
Q ss_pred hcCcchhHHHHHHHHhhccc-ccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhh
Q 014518 12 FNNRWLVFVAAMWIQSCAGI-GYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQ 89 (423)
Q Consensus 12 ~~~Rw~~l~a~~~i~l~~Gt-~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~ 89 (423)
.+++|..+..+.+...+.|. .+.++.+.|.+++.+|+|..+...+.....++..+ .++.|.+.||+|+|.++.++.+.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 91 (398)
T TIGR00895 12 SRYQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILL 91 (398)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHH
Confidence 34567777777777666654 56778899999999999999999988877888766 68899999999999999999998
Q ss_pred hhhcceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHHHHH
Q 014518 90 NFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVY 165 (423)
Q Consensus 90 ~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s~i~ 165 (423)
..+++.++... +++|.+.+..++.|.+.+..+.+......+++| ++||.+.|+......+++.+-..+.
T Consensus 92 ~~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 161 (398)
T TIGR00895 92 FSVFTLLCALA-------TNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLA 161 (398)
T ss_pred HHHHHHHHHHc-------cchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHH
Confidence 88887765432 246667777788889988888888888889998 5799999998888888776665444
No 9
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.12 E-value=5.3e-12 Score=132.43 Aligned_cols=138 Identities=17% Similarity=0.217 Sum_probs=95.0
Q ss_pred chhHHHHHHHHhhcccccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcc
Q 014518 16 WLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGY 94 (423)
Q Consensus 16 w~~l~a~~~i~l~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy 94 (423)
|.............-..|.++.+.|.+++.+|+|.+|.+++.+...+|..+ .++.|.+.||+|+|.++.++.+...++.
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~ 115 (476)
T PLN00028 36 RAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAV 115 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHH
Confidence 344444333344444567888888999999999999999988877888876 4899999999999999999998877776
Q ss_pred eeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHH
Q 014518 95 GWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAIL 161 (423)
Q Consensus 95 ~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~ 161 (423)
.+...+ + +++.+.+.-++.|.+.+.. ..+.....++|| ++||.+.|+..+...+++++-
T Consensus 116 ~~~~~~-----~--s~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~ 175 (476)
T PLN00028 116 FCMSLV-----S--SATGFIAVRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVT 175 (476)
T ss_pred HHHHHh-----c--CHHHHHHHHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHH
Confidence 543221 1 3344444444555555432 233334567897 579999998776555555443
No 10
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.09 E-value=9.2e-13 Score=130.46 Aligned_cols=128 Identities=20% Similarity=0.174 Sum_probs=106.8
Q ss_pred ccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchH
Q 014518 32 GYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPL 110 (423)
Q Consensus 32 ~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~ 110 (423)
.+.++...|.+++++|+|..+...+..+..++..+ .++.|.+.||+|+|.++.++.+...++..++..+ +++
T Consensus 10 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~-------~~~ 82 (399)
T TIGR00893 10 RANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFA-------GAY 82 (399)
T ss_pred HHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHH-------cCH
Confidence 46678888999999999999999988888888865 7899999999999999999998877777664332 156
Q ss_pred HHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHHHHHH
Q 014518 111 WAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYT 166 (423)
Q Consensus 111 ~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s~i~~ 166 (423)
|.+.+..++.|.|.+...++......+++| ++||.+.|+.....++++.+-..+..
T Consensus 83 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 139 (399)
T TIGR00893 83 VSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVG 139 (399)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHH
Confidence 777788888899999888888888999998 57999999999988888877655443
No 11
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.09 E-value=6.2e-12 Score=131.16 Aligned_cols=145 Identities=11% Similarity=0.055 Sum_probs=108.6
Q ss_pred cCcchhHHHHHHHHhh-cccccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhh
Q 014518 13 NNRWLVFVAAMWIQSC-AGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQN 90 (423)
Q Consensus 13 ~~Rw~~l~a~~~i~l~-~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~ 90 (423)
..||..++++.+.+.. -+..+.++.+-+++++.+|+|+++...+.+...++..+ +++.|.+.||+|+|.+++++.+..
T Consensus 15 ~~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~ 94 (455)
T TIGR00892 15 GWGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLA 94 (455)
T ss_pred CcchHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHH
Confidence 3479888887776542 34457789999999999999999999977766666544 788999999999999999998887
Q ss_pred hhcceeeeeeeeCCCCCchHHHHhh-heeeecCCceeeehhhhhhhhhcCCCCCCCeeEeeccccchhhHHHHHH
Q 014518 91 FIGYGWVWLIVTGRAPVLPLWAMCI-LIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQV 164 (423)
Q Consensus 91 ~~Gy~~~~l~~~g~i~~~~~~~l~~-f~~l~g~g~~~~~ta~l~t~~~nFP~~RG~vvgilk~~~GLSaaI~s~i 164 (423)
.++..+... .. ++|.+.+ .-++.|.|.+.....+.....++||++||.+.|+.....++++.+...+
T Consensus 95 ~~~~~~~~~--~~-----~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~r~~a~g~~~~~~~~g~~~~~~l 162 (455)
T TIGR00892 95 SLGMILASF--SS-----NVIELYLTAGFITGLGLAFNFQPSLTMLGKYFYRRRPLANGLAMAGSPVFLSTLAPL 162 (455)
T ss_pred HHHHHHHHH--hh-----hHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHhhHHHHHHHHHhcccHHHHHHHHH
Confidence 777665322 11 3445433 2345567776555566666778999999999999999999888776444
No 12
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.07 E-value=3.2e-12 Score=132.11 Aligned_cols=130 Identities=16% Similarity=0.148 Sum_probs=104.1
Q ss_pred ccccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCc
Q 014518 30 GIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVL 108 (423)
Q Consensus 30 Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~ 108 (423)
-..+.++.+.|++++.+|+|.+|...+.+...++..+ .++.|.+.||+|+|.++.++.+...++..++.. . +
T Consensus 37 ~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~-----~--~ 109 (434)
T PRK11663 37 FTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGF-----S--S 109 (434)
T ss_pred HhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHH-----H--h
Confidence 3456788899999999999999999988888888755 789999999999999999999998877765432 1 2
Q ss_pred hHHHHhhheeeecCCceeeehhhhhhhhhcCCC-CCCCeeEeeccccchhhHHHHHHHH
Q 014518 109 PLWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAILTQVYT 166 (423)
Q Consensus 109 ~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~-~RG~vvgilk~~~GLSaaI~s~i~~ 166 (423)
++|.+++..++.|.+.+....++.....++||+ +||++.|+.-...++++.+-..+..
T Consensus 110 ~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~ 168 (434)
T PRK11663 110 SLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVG 168 (434)
T ss_pred HHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566777666666777777777777788899984 6999999999888888877654443
No 13
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.03 E-value=1.4e-11 Score=122.69 Aligned_cols=126 Identities=18% Similarity=0.237 Sum_probs=97.2
Q ss_pred cccccccccchhh-hhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCC
Q 014518 29 AGIGYLFGSISPV-IKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAP 106 (423)
Q Consensus 29 ~Gt~Y~Fs~yS~~-Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~ 106 (423)
....|.++.+.|+ +++.+|+|..+.+++.....++..+ .++.|.+.||+|+|.+++++.++..++..++..+ +
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~-----~ 88 (366)
T TIGR00886 14 FSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLA-----V 88 (366)
T ss_pred HHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH-----h
Confidence 4456889999996 9999999999999999888888866 7899999999999999999999988887765432 1
Q ss_pred CchHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHH
Q 014518 107 VLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAIL 161 (423)
Q Consensus 107 ~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~ 161 (423)
. ++|.+.+..++.|.+.+. ...+.....++|| ++||.+.++..+...++..+-
T Consensus 89 ~-~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 142 (366)
T TIGR00886 89 Q-SYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVA 142 (366)
T ss_pred h-hHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHH
Confidence 0 455666666666666553 3556777788897 579999998776555554443
No 14
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.01 E-value=4.6e-12 Score=128.68 Aligned_cols=147 Identities=14% Similarity=0.042 Sum_probs=120.4
Q ss_pred hhhcCcchhHHHHHHHHhhccc-ccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHH
Q 014518 10 SFFNNRWLVFVAAMWIQSCAGI-GYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGA 87 (423)
Q Consensus 10 ~~~~~Rw~~l~a~~~i~l~~Gt-~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~ 87 (423)
++.+++|..+..+.++..+.+. .+.++...|.+++.+|+|.+|.+.+.++..+|..+ .++.|.+.||+|+|.++.++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 87 (406)
T PRK11551 8 ASSSRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSV 87 (406)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHH
Confidence 4556899999998888877764 67889999999999999999999999888888866 688999999999999999999
Q ss_pred hhhhhcceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHHH
Q 014518 88 LQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQ 163 (423)
Q Consensus 88 ~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s~ 163 (423)
++..++..+..++ ++++.+.+..++.|.+.+....+......++|| ++||++.|+......+++.+-..
T Consensus 88 ~~~~~~~~~~~~~-------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~ 157 (406)
T PRK11551 88 ALFGLFSLATAQA-------WDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASV 157 (406)
T ss_pred HHHHHHHHHHHHh-------ccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8877776553321 246677777788889888888778888889997 67999999888777777665533
No 15
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.99 E-value=9.1e-12 Score=129.44 Aligned_cols=151 Identities=13% Similarity=0.158 Sum_probs=107.3
Q ss_pred hhhhcCcchhHHHHHHHHhhccc-ccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHH
Q 014518 9 VSFFNNRWLVFVAAMWIQSCAGI-GYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVG 86 (423)
Q Consensus 9 ~~~~~~Rw~~l~a~~~i~l~~Gt-~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG 86 (423)
+..++.+|.++.+..+....... .+.++..-|.+++. |+|.++...+.+..-++..+ .++.|.+.||+|+|.++.++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~ 99 (452)
T PRK11273 21 PTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAG 99 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHH
Confidence 33445567765555444333332 23467788999988 99999999988888888755 88999999999999999999
Q ss_pred HhhhhhcceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHHH
Q 014518 87 ALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQ 163 (423)
Q Consensus 87 ~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s~ 163 (423)
.+...++...+.++-.. ..+++.+.+..++.|.+++..+..+.....++|| ++||++.|+.-...++++++...
T Consensus 100 ~~~~~i~~~~~~~~~~~---~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~ 174 (452)
T PRK11273 100 LILAAAVMLFMGFVPWA---TSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPL 174 (452)
T ss_pred HHHHHHHHHHHHhhhcc---cccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHH
Confidence 98877777655443211 1135555555566777777776666677788897 56999999977777777665543
No 16
>PRK03699 putative transporter; Provisional
Probab=98.97 E-value=1.3e-11 Score=125.70 Aligned_cols=146 Identities=16% Similarity=0.153 Sum_probs=113.6
Q ss_pred hcCcchhHHHHHHHHhhcc-cccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhh
Q 014518 12 FNNRWLVFVAAMWIQSCAG-IGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQ 89 (423)
Q Consensus 12 ~~~Rw~~l~a~~~i~l~~G-t~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~ 89 (423)
..|||.+...+.+...+.| ..+.++...|++++.+|+|.+|...+.....+|..+ .++.|.+.||+|+|.++.++.+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~ 81 (394)
T PRK03699 2 NSNRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFAL 81 (394)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 3577776666666665554 478899999999999999999999988888888766 66899999999999999999988
Q ss_pred hhhcceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCCC-CCCCeeEeeccccchhhHHHHHH
Q 014518 90 NFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAILTQV 164 (423)
Q Consensus 90 ~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~-~RG~vvgilk~~~GLSaaI~s~i 164 (423)
..++..+...+ +++|.+.+..++.|.+.+.....+.....+.||+ +||.+.++.-...++++.+...+
T Consensus 82 ~~i~~~l~~~~-------~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~ 150 (394)
T PRK03699 82 MILAVAGLMFS-------HSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPII 150 (394)
T ss_pred HHHHHHHHHHc-------chHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 87777664331 2466666667777777777777777777889985 68998888777777777665443
No 17
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.94 E-value=5.9e-11 Score=121.15 Aligned_cols=123 Identities=12% Similarity=0.044 Sum_probs=101.0
Q ss_pred cccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHH
Q 014518 33 YLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLW 111 (423)
Q Consensus 33 Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~ 111 (423)
+.++...|++++++|+|.+|..++.+...+|..+ .++.|.+.||+|+|.++.+|.++..+|..+..+ . ++++
T Consensus 26 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~-----a--~~~~ 98 (393)
T PRK09705 26 TSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMREL-----Y--PQSA 98 (393)
T ss_pred hccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHH-----C--cchH
Confidence 6689999999999999999999988887787755 788999999999999999999999999886432 2 2455
Q ss_pred HHhhheeeecCCceeeehhhhhhhhhcCCCCCCCeeEeeccccchhhHHHH
Q 014518 112 AMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILT 162 (423)
Q Consensus 112 ~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~~RG~vvgilk~~~GLSaaI~s 162 (423)
.+.+.-++.|.|.+..+..+....-++||++||.+.|+.-+...+++.+-.
T Consensus 99 ~ll~~r~l~Gig~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~ 149 (393)
T PRK09705 99 LLLSSALLGGVGIGIIQAVMPSVIKRRFQQRTPLVMGLWSAALMGGGGLGA 149 (393)
T ss_pred HHHHHHHHHHhHHHHHhhhhhHHHHHHccccchhHHHHHHHHHHHHHHHHH
Confidence 666778889999998877766667788999999999987766655555443
No 18
>PRK03545 putative arabinose transporter; Provisional
Probab=98.93 E-value=3.2e-11 Score=122.37 Aligned_cols=142 Identities=11% Similarity=-0.019 Sum_probs=103.7
Q ss_pred cCcchhHHHHHHHHhhc-ccccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhh
Q 014518 13 NNRWLVFVAAMWIQSCA-GIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQN 90 (423)
Q Consensus 13 ~~Rw~~l~a~~~i~l~~-Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~ 90 (423)
.+||..+..-.+.+... -..|.-+..-|++++++|+|++|...+.+...++..+ .++.|.+.||+|+|.++.++.+..
T Consensus 5 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 84 (390)
T PRK03545 5 KVAWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLF 84 (390)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 45675444434443333 3344444567899999999999999987777777655 688999999999999999999988
Q ss_pred hhcceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHH
Q 014518 91 FIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAIL 161 (423)
Q Consensus 91 ~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~ 161 (423)
.+|..+... . +++|.+.+.-++.|.+.+.....+.....+++| ++||.+.|+.....+++.++-
T Consensus 85 ~~~~~~~~~-----~--~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig 149 (390)
T PRK03545 85 IASHVLSAL-----A--WNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLG 149 (390)
T ss_pred HHHHHHHHH-----h--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHH
Confidence 888765332 1 256677766677777777766666666778887 689999999877777766554
No 19
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.91 E-value=3.9e-11 Score=122.65 Aligned_cols=145 Identities=19% Similarity=0.142 Sum_probs=113.3
Q ss_pred cCcchhHHHHHHHHhhccc-ccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhh
Q 014518 13 NNRWLVFVAAMWIQSCAGI-GYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQN 90 (423)
Q Consensus 13 ~~Rw~~l~a~~~i~l~~Gt-~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~ 90 (423)
+.||..++.......+.+. .+..+...|.+++.+|+|..|...+.+...+|..+ +++.|.+.||+|+|.++.++.+..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~ 93 (426)
T PRK12307 14 RPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAY 93 (426)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 3445555555555566554 33445666888999999999999988888888866 788999999999999999999998
Q ss_pred hhcceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHHHH
Q 014518 91 FIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQV 164 (423)
Q Consensus 91 ~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s~i 164 (423)
.+|..+...+ .++|.+.+.-++.|.|.+..+++......++|| ++||++.|+.....+++..+...+
T Consensus 94 ~~~~~~~~~~-------~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l 161 (426)
T PRK12307 94 SVGTGLSGLA-------SGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYF 161 (426)
T ss_pred HHHHHHHHHH-------hHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHH
Confidence 8887653332 246677777888889888888888888889998 559999999988888887776444
No 20
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.88 E-value=5.7e-11 Score=122.85 Aligned_cols=149 Identities=16% Similarity=0.164 Sum_probs=109.7
Q ss_pred hcCcchhHHHHHHHHhhccc-ccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhh
Q 014518 12 FNNRWLVFVAAMWIQSCAGI-GYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQ 89 (423)
Q Consensus 12 ~~~Rw~~l~a~~~i~l~~Gt-~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~ 89 (423)
.+.||..+.+..+...+... ...|+...|.+++ +|+|++|...+..+..++..+ .++.|.+.||+|+|.++.+|.+.
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~ 100 (438)
T TIGR00712 22 KRLRWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLIL 100 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHH
Confidence 34567776666555544443 3456667788887 599999999988888888855 78999999999999999999888
Q ss_pred hhhcceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHHHH
Q 014518 90 NFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQV 164 (423)
Q Consensus 90 ~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s~i 164 (423)
..+++..+...- .. ..+++.+++..++.|.+.+....+......+.|| ++||++.|+.-...++++.+...+
T Consensus 101 ~~~~~~~~~~~~--~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l 173 (438)
T TIGR00712 101 SAAVMLLMGFVP--WA-TSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLL 173 (438)
T ss_pred HHHHHHHHhccc--cc-cchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHH
Confidence 888776643321 11 1246666666667777777766777777788996 679999999888877777766444
No 21
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.80 E-value=1.8e-10 Score=119.81 Aligned_cols=117 Identities=11% Similarity=0.030 Sum_probs=94.9
Q ss_pred ccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHhhheeeecCC
Q 014518 45 SLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNG 123 (423)
Q Consensus 45 ~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g 123 (423)
.+++|.++...+..+-.+|..+ +++.|.+.||+|+|.++.++.+...++..+...+.. .+++.+.+.-++.|.+
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~~~G~~ 144 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAG-----GGIALVVFCRVIQGLA 144 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHH-----cCchHHHHHHHHHHHh
Confidence 6899999999988888888866 789999999999999999999887777665322221 1344566677788899
Q ss_pred ceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHHHHHH
Q 014518 124 ETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYT 166 (423)
Q Consensus 124 ~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s~i~~ 166 (423)
.+....++.....++|| ++||++.|+......++..+-..+..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~ 188 (465)
T TIGR00894 145 QGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISG 188 (465)
T ss_pred cccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998 68999999999988888877655543
No 22
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.79 E-value=7.3e-11 Score=118.07 Aligned_cols=143 Identities=15% Similarity=0.065 Sum_probs=107.8
Q ss_pred CcchhHHHHHHHHhhcccccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhh
Q 014518 14 NRWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFI 92 (423)
Q Consensus 14 ~Rw~~l~a~~~i~l~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~ 92 (423)
+|+..+.+ ++..+..-....+...-|.+++.+|+|.++...+.++..+|..+ .++.|.+.||+|+|.++.++.+...+
T Consensus 4 ~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~ 82 (385)
T TIGR00710 4 KAFALLLG-CLSILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFAL 82 (385)
T ss_pred hHHHHHHH-HHHHHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHH
Confidence 34443333 33333333334455556888999999999999988888888765 78999999999999999999988888
Q ss_pred cceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHHHH
Q 014518 93 GYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQV 164 (423)
Q Consensus 93 Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s~i 164 (423)
+..++..+ +++|.+++..++.|.+.+..+++......+++| ++||.+.|+......+++.+-..+
T Consensus 83 ~~~~~~~~-------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 148 (385)
T TIGR00710 83 SSLGLALS-------NNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLL 148 (385)
T ss_pred HHHHHHHH-------ccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77764321 256677777888899999888888888888998 569999999888888776665444
No 23
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.77 E-value=4.6e-10 Score=112.25 Aligned_cols=121 Identities=19% Similarity=0.064 Sum_probs=96.4
Q ss_pred cccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHH
Q 014518 33 YLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLW 111 (423)
Q Consensus 33 Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~ 111 (423)
..++..-|++++.+|+|.++...+.....++..+ +++.|.+.||+|+|.++.+|.+...+|.... .. ++.+
T Consensus 17 ~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~------~~--~~~~ 88 (355)
T TIGR00896 17 TSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR------SA--PGTA 88 (355)
T ss_pred ccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH------Hh--ccHH
Confidence 4567788999999999999999998888888866 7899999999999999999998877776542 11 2355
Q ss_pred HHhhheeeecCCceeeehhhhhhhhhcCCCCCCCeeEeeccccchhhHHH
Q 014518 112 AMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAIL 161 (423)
Q Consensus 112 ~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~~RG~vvgilk~~~GLSaaI~ 161 (423)
.+.+..++.|.|.+...+++.....+.||++||.+.|+.....+++..+-
T Consensus 89 ~l~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~ 138 (355)
T TIGR00896 89 LLFAGTALIGVGIAIINVLLPSLIKRDFPQRVGLMTGLYSMALMGGAALA 138 (355)
T ss_pred HHHHHHHHHHHHHHHHhccchHHHHHhCcchhhHHHHHHHHHHHHHHHHH
Confidence 55566677788877766666556678889999999998887777776655
No 24
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.75 E-value=4.3e-10 Score=112.94 Aligned_cols=151 Identities=15% Similarity=0.121 Sum_probs=124.1
Q ss_pred hhcCcchhHHHHHHHHhhccc-ccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHh
Q 014518 11 FFNNRWLVFVAAMWIQSCAGI-GYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGAL 88 (423)
Q Consensus 11 ~~~~Rw~~l~a~~~i~l~~Gt-~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~ 88 (423)
..+++|..+.+..+...+.+. .+.++...+++++++|+|++|...+.....++..+ +++.|.+.||+|+|.++.++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~ 85 (405)
T TIGR00891 6 LTRAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIV 85 (405)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 456888888887777777775 56688888999999999999999988888888766 7899999999999999999998
Q ss_pred hhhhcceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHHHHHHH
Q 014518 89 QNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTM 167 (423)
Q Consensus 89 ~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s~i~~~ 167 (423)
...++..+... . +++|.+.+.-++.|.|.+..+.++.....+++| ++||.+.|+.-...+++..+-..+...
T Consensus 86 ~~~~~~~~~~~-----~--~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~ 158 (405)
T TIGR00891 86 LFSAGTLACGF-----A--PGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSL 158 (405)
T ss_pred HHHHHHHHHHH-----h--ccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87777665432 1 257777888888999999888888888889997 679999999998888888776665544
Q ss_pred h
Q 014518 168 I 168 (423)
Q Consensus 168 ~ 168 (423)
+
T Consensus 159 l 159 (405)
T TIGR00891 159 V 159 (405)
T ss_pred H
Confidence 4
No 25
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.74 E-value=5e-10 Score=114.45 Aligned_cols=146 Identities=16% Similarity=0.181 Sum_probs=99.6
Q ss_pred cCcchhHHHHHHHHhhcccccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhh
Q 014518 13 NNRWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNF 91 (423)
Q Consensus 13 ~~Rw~~l~a~~~i~l~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~ 91 (423)
++.+...++....+...+..|. ..++ +.+++|+|.+|..++.++..++..+ .++.|.+.||+|+|.++.++.+...
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~--~~~~-~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~ 89 (402)
T TIGR00897 13 LNLLWGYIGVVVFMTGDGLEQG--WLSP-FLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWC 89 (402)
T ss_pred chhhHHHHHHHHHHHhhhhHHH--hHHH-HHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHH
Confidence 3444555555555666665554 3344 4466899999999988877888755 7899999999999999999998877
Q ss_pred hcceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHHHH
Q 014518 92 IGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQV 164 (423)
Q Consensus 92 ~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s~i 164 (423)
++..++- ..+.. .+++|.+.+...+.|.|.+....+......+++| ++||++.|+.-+..+++.++++..
T Consensus 90 ~~~~~~~--~~~~~-~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~ 160 (402)
T TIGR00897 90 VGHAAFI--VFGLG-HANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSY 160 (402)
T ss_pred HHHHHHH--HHhcc-CccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7754321 11111 1245555555666677766554555555667775 789999999888877776555443
No 26
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.72 E-value=9.9e-10 Score=111.96 Aligned_cols=127 Identities=14% Similarity=0.060 Sum_probs=98.8
Q ss_pred cccchhhhhhccCcc--------hhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCC
Q 014518 35 FGSISPVIKSSLNYN--------QKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRA 105 (423)
Q Consensus 35 Fs~yS~~Lk~~l~~s--------q~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i 105 (423)
++..-+.++++++++ +.|...+..+..+|..+ +++.|.+.||+|+|.+++++.++..+|..+.... ..
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~--~~- 123 (481)
T TIGR00879 47 IGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLA--AF- 123 (481)
T ss_pred hhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHh--cc-
Confidence 334445666677666 89999988888888866 7899999999999999999999988877664322 11
Q ss_pred CCchHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHHHHH
Q 014518 106 PVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVY 165 (423)
Q Consensus 106 ~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s~i~ 165 (423)
..+.|.+.+..++.|.|.+..+.+......++|| ++||.+.++.-...++++.+-..+.
T Consensus 124 -~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~ 183 (481)
T TIGR00879 124 -ALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFG 183 (481)
T ss_pred -ccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 1245677788888999999888888888889997 6799999998888888777765554
No 27
>TIGR00898 2A0119 cation transport protein.
Probab=98.65 E-value=2.3e-10 Score=119.95 Aligned_cols=125 Identities=18% Similarity=0.163 Sum_probs=102.3
Q ss_pred ccccccccchhhhhhccCcc---hhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCC
Q 014518 30 GIGYLFGSISPVIKSSLNYN---QKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRA 105 (423)
Q Consensus 30 Gt~Y~Fs~yS~~Lk~~l~~s---q~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i 105 (423)
+-.|.++.+.+++++.+|++ ..+...+..+..+|..+ .++.|.+.||+|+|.+++++.+...++.++..+
T Consensus 103 ~~~~~~~~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~------ 176 (505)
T TIGR00898 103 GWEYSYDTFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAF------ 176 (505)
T ss_pred CcEecCCcccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHH------
Confidence 45677778999999999999 89999988888899877 678999999999999999999887777665432
Q ss_pred CCchHHHHhhheeeecCCceeeehhhhhhhhhcCCC-CCCCeeEeeccccchhhHHH
Q 014518 106 PVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAIL 161 (423)
Q Consensus 106 ~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~-~RG~vvgilk~~~GLSaaI~ 161 (423)
.+++|.+.++-++.|.+.+.....+.....+.+|. +||.+.++...+.+++..+.
T Consensus 177 -~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~ 232 (505)
T TIGR00898 177 -SPNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLL 232 (505)
T ss_pred -cccHHHHHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHH
Confidence 13577888888899999999888888999999975 69988888755555554443
No 28
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.64 E-value=1.9e-09 Score=111.90 Aligned_cols=126 Identities=15% Similarity=0.125 Sum_probs=103.1
Q ss_pred ccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHH
Q 014518 34 LFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWA 112 (423)
Q Consensus 34 ~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~ 112 (423)
..+..-|.+++.+|.|..+...+.++..++..+ .++.|.+.||+|+|.++.+|.+...+|..+...+ ++++.
T Consensus 20 ~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-------~~~~~ 92 (485)
T TIGR00711 20 IVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVA-------PNLEL 92 (485)
T ss_pred HHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCc-------CCHHH
Confidence 355678999999999999999988888888866 6789999999999999999999988888764322 25667
Q ss_pred HhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHHHHHH
Q 014518 113 MCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYT 166 (423)
Q Consensus 113 l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s~i~~ 166 (423)
+.+..++.|.|.+.....+.....++|| ++||.+.|+......+++.+-..+..
T Consensus 93 l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 147 (485)
T TIGR00711 93 MIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGG 147 (485)
T ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHh
Confidence 7788888899999888888888889997 68999999987777777765544433
No 29
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.54 E-value=1.9e-09 Score=109.74 Aligned_cols=122 Identities=13% Similarity=0.134 Sum_probs=91.6
Q ss_pred ccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhh-hcceeeeeeeeCCCCCch
Q 014518 32 GYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNF-IGYGWVWLIVTGRAPVLP 109 (423)
Q Consensus 32 ~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~-~Gy~~~~l~~~g~i~~~~ 109 (423)
-+.|+..-|++++++|+|.+|+..+..+..+|..+ .++.|.+.||+|+|.++. +++..+ .+.. ... ..++
T Consensus 7 ~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~-~~~~~~~~~~~----~~~---~~~~ 78 (368)
T TIGR00903 7 WVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLF-GSLATFAAAAG----RLL---DPFN 78 (368)
T ss_pred HHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHH-HHHHHHHHHHH----HHH---Hhcc
Confidence 35678888999999999999999988887888755 789999999999888755 444433 3321 111 1125
Q ss_pred HHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHH
Q 014518 110 LWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILT 162 (423)
Q Consensus 110 ~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s 162 (423)
++.+.+.-++.|.|.+. ..++.....++|| ++||++.++......+++.+-.
T Consensus 79 ~~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~ 131 (368)
T TIGR00903 79 YEWLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFAL 131 (368)
T ss_pred HHHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67778888888898885 4455555678887 6799999999988888877763
No 30
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.49 E-value=2.8e-09 Score=109.91 Aligned_cols=138 Identities=16% Similarity=0.155 Sum_probs=109.9
Q ss_pred hccccccc-ccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCC
Q 014518 28 CAGIGYLF-GSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRA 105 (423)
Q Consensus 28 ~~Gt~Y~F-s~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i 105 (423)
.-|..+.. +..-|++|+.+|+|.+|...+..+..+|..+ +++.|.+.||+|+|.++.+|.+...+|..+++.+ ...
T Consensus 14 ~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~--~~~ 91 (410)
T TIGR00885 14 LWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPA--AEI 91 (410)
T ss_pred HHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH--Hhh
Confidence 33444444 3667999999999999999999888888866 8899999999999999999999999998664222 111
Q ss_pred CCchHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHHHHHHHhc
Q 014518 106 PVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIH 169 (423)
Q Consensus 106 ~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s~i~~~~f 169 (423)
.++|.+++..++.|.|.+..++++-....+..| ++|+...++.-++.++++.+-..+...++
T Consensus 92 --~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~ 154 (410)
T TIGR00885 92 --MNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLI 154 (410)
T ss_pred --ccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 257788888899999999998877776667777 56899999999999998887766655554
No 31
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.46 E-value=3.8e-09 Score=107.02 Aligned_cols=121 Identities=16% Similarity=0.058 Sum_probs=92.8
Q ss_pred ccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchH
Q 014518 32 GYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPL 110 (423)
Q Consensus 32 ~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~ 110 (423)
.+.+..+-|++++++|+|..+...+.....+|..+ .++.|.+.||+|+|.++++|.+...+++.++..+ +++
T Consensus 19 ~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~-------~~~ 91 (392)
T PRK10473 19 IDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLA-------ETS 91 (392)
T ss_pred HHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHh-------CcH
Confidence 34444789999999999999999887777788766 6889999999999999999999988888764421 245
Q ss_pred HHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhH
Q 014518 111 WAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGA 159 (423)
Q Consensus 111 ~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaa 159 (423)
+.+.+..++.|.+.+..+..+.....+.|| ++|+.+.++.-+...+++.
T Consensus 92 ~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~ 141 (392)
T PRK10473 92 SLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPV 141 (392)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH
Confidence 555555667778877777777777778886 6899988876655544433
No 32
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.45 E-value=7.6e-09 Score=104.95 Aligned_cols=121 Identities=10% Similarity=0.002 Sum_probs=92.0
Q ss_pred cccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHH
Q 014518 33 YLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLW 111 (423)
Q Consensus 33 Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~ 111 (423)
+.++..-|.+++++|+|.+|.+.+..+..+|..+ .++.|.+.||+|+|+++.++.+...++..+... . +++|
T Consensus 20 ~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~-----~--~~~~ 92 (382)
T PRK10091 20 FGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTL-----S--SSYL 92 (382)
T ss_pred HHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHH-----h--CcHH
Confidence 3555577899999999999999988888888866 678999999999999999999998777765322 1 2567
Q ss_pred HHhhheeeecCCceeeehhhhhhhhhcCCC-CCCCeeEeeccccchhhHH
Q 014518 112 AMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAI 160 (423)
Q Consensus 112 ~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~-~RG~vvgilk~~~GLSaaI 160 (423)
.+.+.-++.|.+.+...........+++|+ +||.+.|+.-....++..+
T Consensus 93 ~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 142 (382)
T PRK10091 93 MLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLL 142 (382)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHH
Confidence 777777888888776555555556678875 6888877665555555444
No 33
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.44 E-value=6.1e-08 Score=98.79 Aligned_cols=139 Identities=17% Similarity=0.140 Sum_probs=96.9
Q ss_pred cchhHHHHHHHH-hhcccccccccchhhhhhccCcchhHHHh-hhhccccccccccccchhhhhhhhHHHHHHHHhhhhh
Q 014518 15 RWLVFVAAMWIQ-SCAGIGYLFGSISPVIKSSLNYNQKQIAR-LGVAKDLGDSVGFLAGSLCEVLPIWGALLVGALQNFI 92 (423)
Q Consensus 15 Rw~~l~a~~~i~-l~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~-i~~a~~vG~~~g~~~G~l~D~~gP~~vl~iG~~~~~~ 92 (423)
++..|..+++.- +|=..=+.|+.-.++|++.+|+|..|..+ .++..-.|..+=+|.|++.|++|||.+..++.+...+
T Consensus 12 ~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~I 91 (417)
T COG2223 12 ARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLI 91 (417)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHH
Confidence 344444444432 22233456778889999999999999999 5666677778899999999999999999999988554
Q ss_pred cceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhh-hhcCC-CCCCCeeEeeccccc-hhhHHH
Q 014518 93 GYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSC-VQNFP-KSRGPVVGILKGFAG-LGGAIL 161 (423)
Q Consensus 93 Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~-~~nFP-~~RG~vvgilk~~~G-LSaaI~ 161 (423)
=-+++ ++.... +++|++.+..++.|.+.+-+ |.=+++ -++|| +++|++.||-- .| ++.++-
T Consensus 92 P~~~~--~~a~~~--~~~~~ll~~gll~G~~GasF--av~m~~~s~~fP~~~qG~AlGI~g--~GN~G~av~ 155 (417)
T COG2223 92 PCLGL--AFAVTY--PSTWQLLVIGLLLGLAGASF--AVGMPNASFFFPKEKQGLALGIAG--AGNLGVAVA 155 (417)
T ss_pred HHHHH--HHHccC--CchHHHHHHHHHHhccccee--hcccccccccCChhhhhHHHHHhc--cccccHHHH
Confidence 44333 333332 35688888888888877755 444444 45667 67899999876 55 444433
No 34
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.44 E-value=4.9e-09 Score=103.01 Aligned_cols=128 Identities=23% Similarity=0.295 Sum_probs=105.3
Q ss_pred cccchh-hhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHH
Q 014518 35 FGSISP-VIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWA 112 (423)
Q Consensus 35 Fs~yS~-~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~ 112 (423)
++..-+ .+++++|+|.+|++.+.++..++..+ +++.|.+.||+|+|.++.++.+...++..... +. .+.|.
T Consensus 15 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~--~~-----~~~~~ 87 (352)
T PF07690_consen 15 ISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLA--FA-----SNFWL 87 (352)
T ss_dssp HHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHH--HH-----CCHHH
T ss_pred HHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhh--hh-----hhHHH
Confidence 344445 78999999999999988888888755 88999999999999999999999998844333 22 24667
Q ss_pred HhhheeeecCCceeeehhhhhhhhhcCCC-CCCCeeEeeccccchhhHHHHHHHHHhc
Q 014518 113 MCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAILTQVYTMIH 169 (423)
Q Consensus 113 l~~f~~l~g~g~~~~~ta~l~t~~~nFP~-~RG~vvgilk~~~GLSaaI~s~i~~~~f 169 (423)
+.+..++.|.|.+..+.+......++||+ +|+.+.|+.-...+++..+-..+...+.
T Consensus 88 ~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~ 145 (352)
T PF07690_consen 88 LLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLI 145 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred Hhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhh
Confidence 88888899999999999999999999986 8999999999999999877766655554
No 35
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.43 E-value=1.1e-09 Score=107.95 Aligned_cols=121 Identities=12% Similarity=0.050 Sum_probs=93.7
Q ss_pred hhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHhhheeee
Q 014518 42 IKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVG 120 (423)
Q Consensus 42 Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~ 120 (423)
....++.|..|...+..+..++..+ .++.|.+.||+|+|.+++++.+...++..++..+-. ....++|.+.+..++.
T Consensus 25 ~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~ 102 (365)
T TIGR00900 25 YVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVAL--LGGLNIWQVYVLAGIL 102 (365)
T ss_pred HHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHH--cCCCcHHHHHHHHHHH
Confidence 4445788999999988888888855 789999999999999999998887766655433221 1123677888888888
Q ss_pred cCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHHHH
Q 014518 121 NNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQV 164 (423)
Q Consensus 121 g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s~i 164 (423)
|.+.+....+......+.+| ++||.+.|+.-...+++..+-..+
T Consensus 103 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l 147 (365)
T TIGR00900 103 AIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGI 147 (365)
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 89888888888788888897 579999999988888887654333
No 36
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.43 E-value=1.1e-08 Score=107.70 Aligned_cols=148 Identities=14% Similarity=0.114 Sum_probs=108.8
Q ss_pred CcchhHHHHHHHHhhccc-ccccccchhhhhhccCcchhHHHhhhhccccccc-cccccchhhhhhhhHHHHHHHHhhhh
Q 014518 14 NRWLVFVAAMWIQSCAGI-GYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDS-VGFLAGSLCEVLPIWGALLVGALQNF 91 (423)
Q Consensus 14 ~Rw~~l~a~~~i~l~~Gt-~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~-~g~~~G~l~D~~gP~~vl~iG~~~~~ 91 (423)
|+|..+++.......... .-..+.--|++.+.+|.|++|.+.+.++-.++.. +.++.|.+.||+|+|.++++|.+...
T Consensus 3 ~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~ 82 (495)
T PRK14995 3 RQWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFG 82 (495)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 345544443333333222 2234445789999999999999998888888874 47889999999999999999999988
Q ss_pred hcceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcC-C-CCCCCeeEeeccccchhhHHHHHHHHHh
Q 014518 92 IGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNF-P-KSRGPVVGILKGFAGLGGAILTQVYTMI 168 (423)
Q Consensus 92 ~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nF-P-~~RG~vvgilk~~~GLSaaI~s~i~~~~ 168 (423)
+|..+...+ +++|.+.+.-++.|.|.+....++.....+.| | ++||.+.|+.....+++..+-..+...+
T Consensus 83 ~~~~~~~~a-------~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l 154 (495)
T PRK14995 83 LASLAAAFS-------PTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGIL 154 (495)
T ss_pred HHHHHHHHc-------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 888764321 25778888878888888877766666677888 4 5799999999998888765554444333
No 37
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.40 E-value=6e-09 Score=106.58 Aligned_cols=144 Identities=10% Similarity=0.034 Sum_probs=109.5
Q ss_pred hhcCcchhHHHHHHHHhhccc-ccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHh
Q 014518 11 FFNNRWLVFVAAMWIQSCAGI-GYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGAL 88 (423)
Q Consensus 11 ~~~~Rw~~l~a~~~i~l~~Gt-~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~ 88 (423)
..++-|..+.+..+...+.++ .|.-...-|++++++|+|.+|...+..+..++..+ .++.|.+.||+|+|.++.++.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~ 93 (394)
T PRK10213 14 ITRPNWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAV 93 (394)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHH
Confidence 344457776666666544444 44444467889999999999999976666676644 7889999999999999999999
Q ss_pred hhhhcceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHH
Q 014518 89 QNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAIL 161 (423)
Q Consensus 89 ~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~ 161 (423)
...++..+... . +++|.+.+.-++.|.+.+.....+.....+.|| ++||.+.++.-+..+++..+-
T Consensus 94 ~~~~~~~~~~~-----~--~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig 160 (394)
T PRK10213 94 LLTLSCLLVSF-----A--NSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIA 160 (394)
T ss_pred HHHHHHHHHHH-----H--ChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHH
Confidence 98887765321 1 257788888888888888877777777789997 579999999888877776654
No 38
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.40 E-value=2.2e-09 Score=107.72 Aligned_cols=122 Identities=11% Similarity=0.081 Sum_probs=95.7
Q ss_pred cccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHH
Q 014518 33 YLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLW 111 (423)
Q Consensus 33 Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~ 111 (423)
..+.-.-|++++++|+|.+|.+.+..+..+|..+ +++.|.+.||+|+|.++.+|.+...++..++... +++|
T Consensus 8 ~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~-------~~~~ 80 (377)
T PRK11102 8 DMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALA-------QTID 80 (377)
T ss_pred HHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHH-------ccHH
Confidence 3445566788889999999999988888888766 7899999999999999999999888777765432 2455
Q ss_pred HHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHH
Q 014518 112 AMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAIL 161 (423)
Q Consensus 112 ~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~ 161 (423)
.+.+..++.|.+.+..+.+......++|| ++||.+.++.-...+++..+-
T Consensus 81 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 131 (377)
T PRK11102 81 QLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLA 131 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 66667777888888777777777788898 569999988877766665554
No 39
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.37 E-value=2.2e-08 Score=105.62 Aligned_cols=115 Identities=14% Similarity=0.044 Sum_probs=90.3
Q ss_pred CcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHhhheeeecCCce
Q 014518 47 NYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGET 125 (423)
Q Consensus 47 ~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~ 125 (423)
+++..+...+.....+|..+ .++.|.+.||+|+|.++.++.+...++..+..++.... +..+++.++++-++.|.|.+
T Consensus 52 ~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~r~l~G~~~g 130 (502)
T TIGR00887 52 PLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSS-PKSVMATLCFWRFWLGVGIG 130 (502)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcc-cchHHHHHHHHHHHHHHHHh
Confidence 45667777888888888866 77899999999999999999888888776654443221 11236778888889999999
Q ss_pred eeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHH
Q 014518 126 YFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILT 162 (423)
Q Consensus 126 ~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s 162 (423)
..+..+..-...+|| ++||++.++.-....++..+-.
T Consensus 131 ~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~ 168 (502)
T TIGR00887 131 GDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGA 168 (502)
T ss_pred hhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998 6799999998887777664443
No 40
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.35 E-value=4.4e-08 Score=102.64 Aligned_cols=139 Identities=13% Similarity=0.168 Sum_probs=103.3
Q ss_pred hHHHHHHH-Hhhcccccccccchhhhhh-ccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcc
Q 014518 18 VFVAAMWI-QSCAGIGYLFGSISPVIKS-SLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGY 94 (423)
Q Consensus 18 ~l~a~~~i-~l~~Gt~Y~Fs~yS~~Lk~-~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy 94 (423)
.|..+++- .++=..-+.||.-.+.+++ .+|+|.+|+.++...-.++..+ -+|.|.+.||+|||.++.++.++..++.
T Consensus 35 ~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~ 114 (462)
T PRK15034 35 NLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPC 114 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHH
Confidence 44444433 2333346777777888876 7999999999977666666655 5999999999999999999999988777
Q ss_pred eeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCCC-CCCCeeEeeccccchhhH
Q 014518 95 GWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGA 159 (423)
Q Consensus 95 ~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~-~RG~vvgilk~~~GLSaa 159 (423)
+++..+.+... ++++.+.+..++.|.+ +..+.+++....++||+ +||++.|+.-+.-.+++.
T Consensus 115 ~~~~~a~~~~~--~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~ 177 (462)
T PRK15034 115 VWLGIAVQNPN--TPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVS 177 (462)
T ss_pred HHHHHHHcccC--CCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHH
Confidence 76554444433 3688888888888887 55667888888889995 599999999744445544
No 41
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.33 E-value=1.1e-07 Score=97.16 Aligned_cols=125 Identities=18% Similarity=0.167 Sum_probs=98.7
Q ss_pred ccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHH
Q 014518 34 LFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWA 112 (423)
Q Consensus 34 ~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~ 112 (423)
.|++=.|.|+|++++|.+|+..++++--+.=.+ =+..|.+.||..||....+|-++ .|... .+-|. .++++.
T Consensus 47 nF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLil--sai~n---il~Gf--s~s~~~ 119 (448)
T COG2271 47 NFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLIL--SAIVN---ILFGF--SPSLFL 119 (448)
T ss_pred hHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHH--HHHHH---HHHhh--hhHHHH
Confidence 689999999999999999999988755554433 45799999999999877666555 22211 11111 237888
Q ss_pred HhhheeeecCCceeeehhhhhhhhhcCCC-CCCCeeEeeccccchhhHHHHHHH
Q 014518 113 MCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAILTQVY 165 (423)
Q Consensus 113 l~~f~~l~g~g~~~~~ta~l~t~~~nFP~-~RG~vvgilk~~~GLSaaI~s~i~ 165 (423)
+.++..+-|.=|++.--+|..|-.++||+ +||+..++--+..-.||++..-+.
T Consensus 120 ~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~ 173 (448)
T COG2271 120 FAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVA 173 (448)
T ss_pred HHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHH
Confidence 88888888888888888999999999985 699999999999999999986665
No 42
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.32 E-value=1e-07 Score=96.63 Aligned_cols=143 Identities=15% Similarity=0.085 Sum_probs=103.9
Q ss_pred CcchhHHHHHHHHhhcccccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhh
Q 014518 14 NRWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFI 92 (423)
Q Consensus 14 ~Rw~~l~a~~~i~l~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~ 92 (423)
++...++.+.++...+ ...........+++++|+|.++...+..+..++..+ .++.|.+.||+|+|.++.++.+...+
T Consensus 15 ~~~~~l~~~~~~~~~~-~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~ 93 (399)
T PRK05122 15 LRIVSIVMFTFISYLT-IGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCAL 93 (399)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHH
Confidence 3344454444444333 344555677779999999999999988888888866 78999999999999999999988777
Q ss_pred cceeeeee-eeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchh
Q 014518 93 GYGWVWLI-VTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLG 157 (423)
Q Consensus 93 Gy~~~~l~-~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLS 157 (423)
+.....++ +.+.....+++.+.+..++.|.|.+..+.++.....+++| ++||.+.|+.-....++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 160 (399)
T PRK05122 94 SGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGA 160 (399)
T ss_pred HHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHH
Confidence 66554333 2222222246667777788899999888887777778886 78999999876555444
No 43
>PRK11043 putative transporter; Provisional
Probab=98.32 E-value=1.2e-08 Score=103.62 Aligned_cols=137 Identities=13% Similarity=0.030 Sum_probs=90.8
Q ss_pred cchhHHHHHHHHhhcccccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhc
Q 014518 15 RWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIG 93 (423)
Q Consensus 15 Rw~~l~a~~~i~l~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~G 93 (423)
.|..+..++...+...+.+.|.-.-|++++.+|+|.++...+..+..+|..+ +++.|.+.||+|+|.++.++.++..++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 84 (401)
T PRK11043 5 KGFLVYLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALG 84 (401)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHH
Confidence 3444555555444444444444444667899999999999988888888866 789999999999999999999887777
Q ss_pred ceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCCCC-CCCeeEeeccccchhh
Q 014518 94 YGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKS-RGPVVGILKGFAGLGG 158 (423)
Q Consensus 94 y~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~~-RG~vvgilk~~~GLSa 158 (423)
..+... . +++|.+++..++.|.|.+...........+.||++ |+.+.+..-...++++
T Consensus 85 ~~~~~~-----~--~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (401)
T PRK11043 85 SLGMLW-----V--ESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSP 143 (401)
T ss_pred HHHHHH-----h--cCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH
Confidence 665432 1 24666666666767766544443334456778865 4544444333333333
No 44
>PRK10504 putative transporter; Provisional
Probab=98.29 E-value=5.2e-08 Score=101.31 Aligned_cols=125 Identities=11% Similarity=0.057 Sum_probs=94.9
Q ss_pred ccccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCc
Q 014518 30 GIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVL 108 (423)
Q Consensus 30 Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~ 108 (423)
-..+.++.+-|.+.+.+|+|+.+...+..+..++..+ .++.|.+.|++|+|.+++++.+...+++.+..+ . +
T Consensus 24 ~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~-----~--~ 96 (471)
T PRK10504 24 LDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCAL-----S--G 96 (471)
T ss_pred HhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHH-----h--C
Confidence 3445666788888999999999998877777787654 778999999999999999998887777765321 1 2
Q ss_pred hHHHHhhheeeecCCceeeehhhhhhhhhcCCC-CCCCeeEeeccccchhhHHH
Q 014518 109 PLWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAIL 161 (423)
Q Consensus 109 ~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~-~RG~vvgilk~~~GLSaaI~ 161 (423)
+.+.+.+..++.|.|.+...........+.+|+ +||++.|+......+++.+-
T Consensus 97 ~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 150 (471)
T PRK10504 97 TLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLG 150 (471)
T ss_pred CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhh
Confidence 466677777888888887766666777788984 68998888776666655443
No 45
>PRK15075 citrate-proton symporter; Provisional
Probab=98.29 E-value=8.6e-08 Score=99.07 Aligned_cols=139 Identities=9% Similarity=-0.015 Sum_probs=94.4
Q ss_pred cCcchhHHHHHHHHhhccc-ccccccchhhhhhccCcchhHHHh-hhhcccccc-c----c-ccccchhhhhhhhHHHHH
Q 014518 13 NNRWLVFVAAMWIQSCAGI-GYLFGSISPVIKSSLNYNQKQIAR-LGVAKDLGD-S----V-GFLAGSLCEVLPIWGALL 84 (423)
Q Consensus 13 ~~Rw~~l~a~~~i~l~~Gt-~Y~Fs~yS~~Lk~~l~~sq~~l~~-i~~a~~vG~-~----~-g~~~G~l~D~~gP~~vl~ 84 (423)
..||+...+......+... -..++.+.|+++++++.+++|... ..++...+. + + .++.|.+.||+|+|.+++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~ 90 (434)
T PRK15075 11 ESKARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLI 90 (434)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHH
Confidence 3455543333333333332 345789999999999999988654 322222222 2 2 467899999999999999
Q ss_pred HHHhhhhhcceeeeeeeeCCCCCchHH--------HHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccc
Q 014518 85 VGALQNFIGYGWVWLIVTGRAPVLPLW--------AMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAG 155 (423)
Q Consensus 85 iG~~~~~~Gy~~~~l~~~g~i~~~~~~--------~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~G 155 (423)
++.+...++..+...+ + +++ .+++.-++.|.|.+....++.....++|| ++||.+.++......
T Consensus 91 ~~~~~~~~~~~l~~~~-----~--~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~ 163 (434)
T PRK15075 91 VTLSIMASGTLLIAFV-----P--GYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQ 163 (434)
T ss_pred HHHHHHHHHHHHHHhC-----C--cHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHH
Confidence 9999877776664321 1 232 35666778888888888878788889997 679999988766554
Q ss_pred hhh
Q 014518 156 LGG 158 (423)
Q Consensus 156 LSa 158 (423)
++.
T Consensus 164 ~g~ 166 (434)
T PRK15075 164 VAV 166 (434)
T ss_pred HHH
Confidence 443
No 46
>PRK12382 putative transporter; Provisional
Probab=98.26 E-value=2.6e-07 Score=93.60 Aligned_cols=128 Identities=15% Similarity=0.011 Sum_probs=91.9
Q ss_pred ccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceee-eeeeeCCCCCch
Q 014518 32 GYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWV-WLIVTGRAPVLP 109 (423)
Q Consensus 32 ~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~-~l~~~g~i~~~~ 109 (423)
....++.+..+++++|+|.+|+..+..+..++..+ .++.|.+.||+|+|.++.+|.+...++.... +..+.......+
T Consensus 32 ~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (392)
T PRK12382 32 GLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFK 111 (392)
T ss_pred HHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHH
Confidence 33345555578999999999999988888888755 8999999999999999999887765543221 111111111235
Q ss_pred HHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhH
Q 014518 110 LWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGA 159 (423)
Q Consensus 110 ~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaa 159 (423)
++.+.+.-++.|.|.+....++.....+.+| ++||.+.|+.-....++..
T Consensus 112 ~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~ 162 (392)
T PRK12382 112 FALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALA 162 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHH
Confidence 6777777788888888877777777778886 7899999987655444433
No 47
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.25 E-value=2.5e-08 Score=104.11 Aligned_cols=150 Identities=18% Similarity=0.208 Sum_probs=114.6
Q ss_pred cCcchhHHHHHHHHhhccc-ccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhh
Q 014518 13 NNRWLVFVAAMWIQSCAGI-GYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQN 90 (423)
Q Consensus 13 ~~Rw~~l~a~~~i~l~~Gt-~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~ 90 (423)
++||..+.+........+. .+..+...|++++.+|+|+.+.+.+.....+|..+ +++.|.+.||+|+|.+++++.+..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 95 (496)
T PRK03893 16 RAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLF 95 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 4566655555555444443 33556677999999999999999988777888766 789999999999999999999888
Q ss_pred hhcceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHHHHHHHhc
Q 014518 91 FIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIH 169 (423)
Q Consensus 91 ~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s~i~~~~f 169 (423)
.+|...+.+. .++|.+.+..++.|.+.+..+.++.....++|| ++||.+.|+......+++.+-..+...+.
T Consensus 96 ~~~~~~~~~~-------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 168 (496)
T PRK03893 96 SVGTLACGFA-------PGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVV 168 (496)
T ss_pred HHHHHHHHHH-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8887764431 257777778888888888888888888889998 56999999998888887766655554443
No 48
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.25 E-value=7e-08 Score=94.14 Aligned_cols=133 Identities=23% Similarity=0.283 Sum_probs=112.4
Q ss_pred cccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCch
Q 014518 31 IGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLP 109 (423)
Q Consensus 31 t~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~ 109 (423)
..+.++.+.+.+.+++|.|+++.+.+.....++..+ .++.|.+.||+|+|..+.++.+...++..++.+. ++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~-------~~ 86 (352)
T cd06174 14 DRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFA-------SS 86 (352)
T ss_pred hhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHh-------cc
Confidence 456677788889999999999999999988898866 7899999999999999999999998888876554 25
Q ss_pred HHHHhhheeeecCCceeeehhhhhhhhhcCCC-CCCCeeEeeccccchhhHHHHHHHHHhcC
Q 014518 110 LWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (423)
Q Consensus 110 ~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~-~RG~vvgilk~~~GLSaaI~s~i~~~~f~ 170 (423)
+|.+.+..++.|.+.+....+......+++|+ +|+++.++.....++++.+-..+...+.+
T Consensus 87 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 148 (352)
T cd06174 87 LWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAE 148 (352)
T ss_pred HHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 67777888888999999999888899999986 89999999998888888776666555543
No 49
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.22 E-value=1.3e-07 Score=103.02 Aligned_cols=127 Identities=16% Similarity=0.094 Sum_probs=99.2
Q ss_pred ccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeee--eCCC-----
Q 014518 34 LFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIV--TGRA----- 105 (423)
Q Consensus 34 ~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~--~g~i----- 105 (423)
.++.--++++++++++.+|...|..+.++|..+ .++.|++.||.|++..+.+|.++..+|-+++.+.- .|+.
T Consensus 51 ~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~ 130 (633)
T TIGR00805 51 LVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTT 130 (633)
T ss_pred HHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccccc
Confidence 345556789999999999999999999999966 78999999999999999999999888887765541 0000
Q ss_pred -----------------------------------C--CchHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCee
Q 014518 106 -----------------------------------P--VLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVV 147 (423)
Q Consensus 106 -----------------------------------~--~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vv 147 (423)
. ...++.+.+.-++.|.|.+..++....-...|+| ++||...
T Consensus 131 ~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~ 210 (633)
T TIGR00805 131 VSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYI 210 (633)
T ss_pred ccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHH
Confidence 0 1124456677889999999999999999999997 5789888
Q ss_pred EeeccccchhhHH
Q 014518 148 GILKGFAGLGGAI 160 (423)
Q Consensus 148 gilk~~~GLSaaI 160 (423)
|+..+...++.++
T Consensus 211 ~i~~~~~~iG~~l 223 (633)
T TIGR00805 211 GILESIAVFGPAF 223 (633)
T ss_pred HHHHHHHHhhhHH
Confidence 8766666555543
No 50
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.22 E-value=6.8e-08 Score=97.81 Aligned_cols=121 Identities=15% Similarity=0.155 Sum_probs=91.7
Q ss_pred cccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHH
Q 014518 35 FGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAM 113 (423)
Q Consensus 35 Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l 113 (423)
.+.+-|++++++|+|.+|...+..+..+|..+ .++.|.+.||+|+|.++.+|.+...+|+.+... . +++|.+
T Consensus 25 ~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~-----~--~~~~~l 97 (381)
T PRK03633 25 LNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGL-----M--VGFWSW 97 (381)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----h--ccHHHH
Confidence 44567888889999999999999888999866 788999999999999999999998888765332 1 246666
Q ss_pred hhheeeecCCceeeehhhhhhhhhcC-CCCCCCeeEeeccccchhhHHHH
Q 014518 114 CILIFVGNNGETYFNTAALVSCVQNF-PKSRGPVVGILKGFAGLGGAILT 162 (423)
Q Consensus 114 ~~f~~l~g~g~~~~~ta~l~t~~~nF-P~~RG~vvgilk~~~GLSaaI~s 162 (423)
.+..++.|.+.+...........+.. |++||.+.|+......++.++-.
T Consensus 98 ~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 147 (381)
T PRK03633 98 LAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQ 147 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66677778877766554444444555 47899998887777777666543
No 51
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.17 E-value=2.5e-07 Score=95.52 Aligned_cols=142 Identities=11% Similarity=-0.046 Sum_probs=91.3
Q ss_pred HhhhhcCcchhHHHHHHHHhhccc-ccccccchhhhhhccC---cchhHHHhhh---hcccccccc-ccccchhhhhhhh
Q 014518 8 FVSFFNNRWLVFVAAMWIQSCAGI-GYLFGSISPVIKSSLN---YNQKQIARLG---VAKDLGDSV-GFLAGSLCEVLPI 79 (423)
Q Consensus 8 ~~~~~~~Rw~~l~a~~~i~l~~Gt-~Y~Fs~yS~~Lk~~l~---~sq~~l~~i~---~a~~vG~~~-g~~~G~l~D~~gP 79 (423)
..+...+||..++.+.+......- .+.++.-++.+++.++ .+..|...++ .+.-+|.-+ +++.|.+.||+|+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Gr 92 (432)
T PRK10406 13 TSSDTRRRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGR 92 (432)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 345567787666665444443331 3446677788999874 5555432222 223333334 6689999999999
Q ss_pred HHHHHHHHhhhhhcceeeeeeeeC-CCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEe
Q 014518 80 WGALLVGALQNFIGYGWVWLIVTG-RAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGI 149 (423)
Q Consensus 80 ~~vl~iG~~~~~~Gy~~~~l~~~g-~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgi 149 (423)
|.++.++.+...++.....++-+- .+...+.+.+.++-++.|.|.+....++.....+++| ++||.+.++
T Consensus 93 r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~ 164 (432)
T PRK10406 93 KKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASF 164 (432)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHH
Confidence 999999999987777664432110 0000123467777788999999888888888888887 678865443
No 52
>PRK10133 L-fucose transporter; Provisional
Probab=98.17 E-value=6.4e-08 Score=100.72 Aligned_cols=128 Identities=18% Similarity=0.215 Sum_probs=100.4
Q ss_pred cccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHH
Q 014518 33 YLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLW 111 (423)
Q Consensus 33 Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~ 111 (423)
-.-+.+-|++|+.+|+|.+|...+.+...+|..+ +++.|.+.||+|+|.++.+|.+...+|..++..+ .. .++++
T Consensus 43 ~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~--~~--a~~~~ 118 (438)
T PRK10133 43 NLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPA--AE--IMNYT 118 (438)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH--Hh--cCCHH
Confidence 3445678999999999999999988888888866 8899999999999999999999999998763211 11 23577
Q ss_pred HHhhheeeecCCceeeehhhhhhhhhcCCCCCC-CeeEeeccccchhhHHHHHH
Q 014518 112 AMCILIFVGNNGETYFNTAALVSCVQNFPKSRG-PVVGILKGFAGLGGAILTQV 164 (423)
Q Consensus 112 ~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~~RG-~vvgilk~~~GLSaaI~s~i 164 (423)
.+++..++.|.|.+..++++-.-..+..|++|+ ...++..++.++++.+=..+
T Consensus 119 ~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~ 172 (438)
T PRK10133 119 LFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVF 172 (438)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888999999999888877766666676665 46777777777766555333
No 53
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.16 E-value=1.6e-07 Score=98.66 Aligned_cols=114 Identities=14% Similarity=0.119 Sum_probs=93.3
Q ss_pred hhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHhhheeeec
Q 014518 43 KSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGN 121 (423)
Q Consensus 43 k~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g 121 (423)
+..+++|.+|-++|=.+...|..+ -+|+|.++||+|+|.++.++++...++.+++=++..- ..|.+++.=++.|
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~-----~~~~~~~~R~lqG 139 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASI-----GFYLLLVLRFLQG 139 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHh-----cchhhHHHHHHhH
Confidence 668999999999988889999977 5688999999999999999999988888874222221 2335567778889
Q ss_pred CCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHH
Q 014518 122 NGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAIL 161 (423)
Q Consensus 122 ~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~ 161 (423)
.+.+..+.+.-.-..||+| ++|++.++++.++.-+|..+-
T Consensus 140 l~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~ 180 (466)
T KOG2532|consen 140 LGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIIT 180 (466)
T ss_pred HHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999888888888999997 789999999888886665554
No 54
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=98.10 E-value=6.4e-08 Score=106.96 Aligned_cols=177 Identities=16% Similarity=0.145 Sum_probs=126.9
Q ss_pred cCcchhHHHHHHHHhhccc-ccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhh
Q 014518 13 NNRWLVFVAAMWIQSCAGI-GYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQN 90 (423)
Q Consensus 13 ~~Rw~~l~a~~~i~l~~Gt-~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~ 90 (423)
+.+|.+++...+..+..|. ....+..-|.+++.++++..+..++..+..+|..+ .+++|.+.|++|+|.+++++.++.
T Consensus 163 ~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~ 242 (742)
T TIGR01299 163 RFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVN 242 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 4457666666666555554 23456677889999999999999998888899866 678999999999999999998887
Q ss_pred hhcceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHHHHHHHhc
Q 014518 91 FIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIH 169 (423)
Q Consensus 91 ~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s~i~~~~f 169 (423)
.++..+..+ . +++|.+.++-++.|+|.+.....+.......+| ++||.+.+++-.+..+++.+-..+...+.
T Consensus 243 ~i~~ll~af-----a--~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il 315 (742)
T TIGR01299 243 GFFAFFSSF-----V--QGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAII 315 (742)
T ss_pred HHHHHHHHH-----H--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 776655332 1 246677778888889888877778888888898 57999999999888888777655443332
Q ss_pred CC-------------CccceeeeeeechhhhhhhheeeEe
Q 014518 170 AP-------------DHANLIFMVAVGPAMVVIALMFIIR 196 (423)
Q Consensus 170 ~~-------------~~~~fllfla~~~~~v~~~~~~fvr 196 (423)
+. .....++.+..+|.++.++..+++.
T Consensus 316 ~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lP 355 (742)
T TIGR01299 316 PHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMP 355 (742)
T ss_pred HhccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcC
Confidence 10 1122333444456666666555553
No 55
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.10 E-value=3.3e-07 Score=91.18 Aligned_cols=131 Identities=13% Similarity=0.033 Sum_probs=87.0
Q ss_pred ccccccchhhhhhccCc--chhHHHhhhhcccccc------ccccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeC
Q 014518 32 GYLFGSISPVIKSSLNY--NQKQIARLGVAKDLGD------SVGFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTG 103 (423)
Q Consensus 32 ~Y~Fs~yS~~Lk~~l~~--sq~~l~~i~~a~~vG~------~~g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g 103 (423)
.|.++..++.+++++.. +.++..++.+....+. ..+++.|.+.||+|+|.+++++.+...++..+...+-+-
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~ 88 (394)
T TIGR00883 9 FYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSY 88 (394)
T ss_pred HHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCCh
Confidence 35667788888888764 3344444333222222 125789999999999999999999988887765543221
Q ss_pred CC-CCchHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHH
Q 014518 104 RA-PVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILT 162 (423)
Q Consensus 104 ~i-~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s 162 (423)
.. .....+.+++.-++.|.|.+....++.....+++| ++||.+.++......++..+-.
T Consensus 89 ~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~ 149 (394)
T TIGR00883 89 ATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAA 149 (394)
T ss_pred hhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHH
Confidence 10 00012345666678888888888888888888996 5798887777666666555443
No 56
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.03 E-value=7.7e-07 Score=91.80 Aligned_cols=140 Identities=18% Similarity=0.174 Sum_probs=99.8
Q ss_pred chhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHhhheeeecCCceee
Q 014518 49 NQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYF 127 (423)
Q Consensus 49 sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~ 127 (423)
++.+...+..+..+|..+ ++..|.+.||+|+|+++.++.++..+|..+...+-.. .+++.+++.-++.|.|.+..
T Consensus 44 ~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~----~~~~~~~~~R~~~G~~~g~~ 119 (451)
T PF00083_consen 44 SSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSY----NNFWMLLIGRFLIGFGIGGA 119 (451)
T ss_pred hHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccc----cccccccccccccccccccc
Confidence 344566788888899988 6679999999999999999999998888775444322 14667788888899998877
Q ss_pred ehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHHHHHHHhc--CC-Cccceeeeeeechhhhhhhhe
Q 014518 128 NTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIH--AP-DHANLIFMVAVGPAMVVIALM 192 (423)
Q Consensus 128 ~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s~i~~~~f--~~-~~~~fllfla~~~~~v~~~~~ 192 (423)
.+.+.+-....=| ++||....+...+..++..+-..+...+- .+ +....++.+...|.++.++..
T Consensus 120 ~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~ 188 (451)
T PF00083_consen 120 YVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLR 188 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 7766666666665 68999999999998777655444433331 11 234555556666665544444
No 57
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.97 E-value=2.9e-06 Score=89.75 Aligned_cols=121 Identities=18% Similarity=0.151 Sum_probs=91.3
Q ss_pred hhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhh-hhhcceeeeeeeeCCCCCchHHHHhhheee
Q 014518 42 IKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQ-NFIGYGWVWLIVTGRAPVLPLWAMCILIFV 119 (423)
Q Consensus 42 Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~-~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l 119 (423)
+++.+++.+.|++.+.++..+|=.+ .+|+|++.||+|+...+..-++. ..+|.+..| . .++|.+++.-++
T Consensus 72 ~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~------~--~s~~~~ialr~l 143 (495)
T KOG2533|consen 72 LKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAA------V--HSFPGLIALRFL 143 (495)
T ss_pred CccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHH------H--hhhHHHHHHHHH
Confidence 8899999999999999999999865 77999999999965444433333 223333322 2 146677777777
Q ss_pred ecCCceeeehhhhhhhhhcC-CCCCCCeeEeeccccchhhHHHHHHHHHhcC
Q 014518 120 GNNGETYFNTAALVSCVQNF-PKSRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (423)
Q Consensus 120 ~g~g~~~~~ta~l~t~~~nF-P~~RG~vvgilk~~~GLSaaI~s~i~~~~f~ 170 (423)
.|.-++...-++....-.+| +++||+..|+.-+..++|+.+=+.|.+++++
T Consensus 144 lGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~ 195 (495)
T KOG2533|consen 144 LGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFK 195 (495)
T ss_pred HHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhh
Confidence 77766666666666666666 5789999999999999999999999999875
No 58
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=97.96 E-value=5.1e-07 Score=92.01 Aligned_cols=143 Identities=12% Similarity=0.098 Sum_probs=100.2
Q ss_pred hcCcchhHHHHHHHHhhcc-cccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhh
Q 014518 12 FNNRWLVFVAAMWIQSCAG-IGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQ 89 (423)
Q Consensus 12 ~~~Rw~~l~a~~~i~l~~G-t~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~ 89 (423)
.++.|+..+.....+.++. ....+...-+++++++|+|+.+.+.+.++..+|..+ .++.|.+.||+|+|.+++++.+.
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~ 87 (406)
T PRK15402 8 GRQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAF 87 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHH
Confidence 3555555555555554433 233344445679999999999999977777888755 68899999999999999999988
Q ss_pred hhhcceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCCC-CCCCeeEeeccccchhhHHH
Q 014518 90 NFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAIL 161 (423)
Q Consensus 90 ~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~-~RG~vvgilk~~~GLSaaI~ 161 (423)
..++..+... . +++|.+.+..++.|.+.+.....+.....++||+ +|+.+.++.....+++..+-
T Consensus 88 ~~~~~~~~~~-----~--~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g 153 (406)
T PRK15402 88 FILTCLAILL-----A--QSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLG 153 (406)
T ss_pred HHHHHHHHHH-----H--ccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHH
Confidence 7777665332 1 2456666777777787777666666667788985 56777777766665554443
No 59
>PRK10054 putative transporter; Provisional
Probab=97.93 E-value=5.7e-07 Score=92.02 Aligned_cols=145 Identities=10% Similarity=0.025 Sum_probs=94.4
Q ss_pred cCcchhHHHHHHHHhhcccccccccchhhhhhccCcchhHHHhhhhcccccc-ccccccchhhhhhhhHHHHHHHHhhhh
Q 014518 13 NNRWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGD-SVGFLAGSLCEVLPIWGALLVGALQNF 91 (423)
Q Consensus 13 ~~Rw~~l~a~~~i~l~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~-~~g~~~G~l~D~~gP~~vl~iG~~~~~ 91 (423)
+|+...+..+.++ ...|....++..++.+++++|+|.++..++.....++. ...++.|.+.||+|+|.+++++.+...
T Consensus 6 ~~~~~~l~~~~~~-~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~ 84 (395)
T PRK10054 6 RRSTSALLASSLL-LTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFA 84 (395)
T ss_pred CchHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHH
Confidence 3334444443333 35555556677888999999999999999777666655 447899999999999999999998887
Q ss_pred hcceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHHHHH
Q 014518 92 IGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVY 165 (423)
Q Consensus 92 ~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s~i~ 165 (423)
+++.++. +. + +.|.+.+..++.+.+.+.+..+.-.-..+.+| ++||++.|+.-+...++.++-..+.
T Consensus 85 ~~~~~~~--~~---~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~ 152 (395)
T PRK10054 85 SGFIAIP--LV---N--NVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLG 152 (395)
T ss_pred HHHHHHH--HH---h--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8776532 11 1 34444333333333333333333333346665 5699999988888777666554443
No 60
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=97.91 E-value=4e-07 Score=93.33 Aligned_cols=144 Identities=14% Similarity=0.230 Sum_probs=109.4
Q ss_pred CcchhHHHHHHHHhhcccccccccchhhhhhccCcchhHHHhhhhcccccc-ccccccchhhhhhhhHHHHHHHHhhhhh
Q 014518 14 NRWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGD-SVGFLAGSLCEVLPIWGALLVGALQNFI 92 (423)
Q Consensus 14 ~Rw~~l~a~~~i~l~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~-~~g~~~G~l~D~~gP~~vl~iG~~~~~~ 92 (423)
.+|+.+.+..++.++.+. .++..+..+++.+|+|-.+...+.....++. ..+++.|.+.||+|+|.++.++.+...+
T Consensus 11 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~ 88 (400)
T PRK11646 11 GKYFLLIDNMLVVLGFFV--VFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAA 88 (400)
T ss_pred cHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHH
Confidence 457777777777666544 4777888899999999999999777666665 4478999999999999999999999888
Q ss_pred cceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHHHHHH
Q 014518 93 GYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYT 166 (423)
Q Consensus 93 Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s~i~~ 166 (423)
+..++.. . +++|.+++..++.|.+.+....+......+.+| ++||.+.|+......++..+-..+..
T Consensus 89 ~~~~~~~-----~--~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g 156 (400)
T PRK11646 89 GFATMAI-----A--HEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGS 156 (400)
T ss_pred HHHHHHH-----h--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7776432 1 256777777778888877766666666678886 68999999987777776655544443
No 61
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=97.84 E-value=7.8e-07 Score=88.73 Aligned_cols=117 Identities=10% Similarity=0.057 Sum_probs=67.7
Q ss_pred ccchhhhhhccCcchhHHHhhhhcccccc-ccccccchhhhhhhhHHHHHH-HHhhhhhcceeeeeeeeCCCCCchHHHH
Q 014518 36 GSISPVIKSSLNYNQKQIARLGVAKDLGD-SVGFLAGSLCEVLPIWGALLV-GALQNFIGYGWVWLIVTGRAPVLPLWAM 113 (423)
Q Consensus 36 s~yS~~Lk~~l~~sq~~l~~i~~a~~vG~-~~g~~~G~l~D~~gP~~vl~i-G~~~~~~Gy~~~~l~~~g~i~~~~~~~l 113 (423)
...+..+++++|+|..+...+.++..++. ..+++.|.+.||+|+|.++++ +.+...++..+.+. .+++|.+
T Consensus 18 ~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~-------~~~~~~l 90 (375)
T TIGR00899 18 PTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAW-------NRNYFLL 90 (375)
T ss_pred hHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHh-------cchHHHH
Confidence 44555689999999999999877666655 458899999999998876555 44443444443322 1246665
Q ss_pred hhheeeecCCceeeehhhhhhhhhcCCCCCCCe----eEeeccccchhhHH
Q 014518 114 CILIFVGNNGETYFNTAALVSCVQNFPKSRGPV----VGILKGFAGLGGAI 160 (423)
Q Consensus 114 ~~f~~l~g~g~~~~~ta~l~t~~~nFP~~RG~v----vgilk~~~GLSaaI 160 (423)
++..++.+.+.+.... +..+..+.++++|+.. .++..+..+++..+
T Consensus 91 ~~~~~~~g~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i 140 (375)
T TIGR00899 91 LVLGVLLSSFASTANP-QLFALAREHADRTGREAVMFSSVMRAQISLAWVI 140 (375)
T ss_pred HHHHHHHHhhhhhhHH-HHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHH
Confidence 5554444443333332 3334444443333332 34444444444433
No 62
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=97.84 E-value=7.2e-07 Score=90.47 Aligned_cols=136 Identities=10% Similarity=0.002 Sum_probs=92.1
Q ss_pred chhHHHHHHHHhhcc-cccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhc
Q 014518 16 WLVFVAAMWIQSCAG-IGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIG 93 (423)
Q Consensus 16 w~~l~a~~~i~l~~G-t~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~G 93 (423)
|+.+...+.+..+.. ..+.+...-|.+.+.+|+|..+...+..+..++..+ .++.|.+.||+|+|.++.++.+...++
T Consensus 7 ~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~ 86 (394)
T PRK11652 7 VNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILG 86 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHH
Confidence 344444444443333 223344445778889999999999988888888765 788999999999999999999888877
Q ss_pred ceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhh
Q 014518 94 YGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGG 158 (423)
Q Consensus 94 y~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSa 158 (423)
....... ++++.+++..++.|.+.+.....+.....+.+| ++|+.+.++......++.
T Consensus 87 ~~~~~~~-------~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (394)
T PRK11652 87 TLVALFA-------HSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSP 145 (394)
T ss_pred HHHHHHH-------ccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 7664321 246677777777777776554444444455676 567877766554444433
No 63
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=97.81 E-value=9.6e-07 Score=101.68 Aligned_cols=143 Identities=11% Similarity=0.018 Sum_probs=95.7
Q ss_pred CcchhHHHHHHHHhhcccccccccchhhhhhccCcchhH--HHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhh
Q 014518 14 NRWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQ--IARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQN 90 (423)
Q Consensus 14 ~Rw~~l~a~~~i~l~~Gt~Y~Fs~yS~~Lk~~l~~sq~~--l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~ 90 (423)
+.+..+..+.++...+...+ ..+..+.++..++.+++. ...+.++..++..+ ++++|.+.||+|+|.+++++.++.
T Consensus 9 ~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~ 87 (1146)
T PRK08633 9 IGFLPLLLTQFLNAFNDLGH-KILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFE 87 (1146)
T ss_pred hhhHHHHHHHHHhHHHHHHH-HHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHH
Confidence 34444544444433222222 234455566666776555 45566666666644 789999999999999998887665
Q ss_pred hhcceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHH
Q 014518 91 FIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAIL 161 (423)
Q Consensus 91 ~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~ 161 (423)
.++.++..++.. . .++|.+.+..++.|.+.+....+......+++| ++||.+.|+.-....++..+-
T Consensus 88 ~~~~~~~~~~~~--~--~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg 155 (1146)
T PRK08633 88 VGLTLLIVLAYY--L--GWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAG 155 (1146)
T ss_pred HHHHHHHHHHHH--H--ccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHH
Confidence 555444322211 1 246778888888899999998888888899997 679999999888777655443
No 64
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=97.81 E-value=3.1e-06 Score=87.88 Aligned_cols=131 Identities=16% Similarity=0.090 Sum_probs=98.9
Q ss_pred ccccccch---hhhhhcc--------CcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeee
Q 014518 32 GYLFGSIS---PVIKSSL--------NYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWL 99 (423)
Q Consensus 32 ~Y~Fs~yS---~~Lk~~l--------~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l 99 (423)
.|..++++ +.+++.+ +++..+.+.+.+...+|..+ .++.|.+.||+|+|.+++++.++..+|..+..+
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~ 104 (479)
T PRK10077 25 GYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAW 104 (479)
T ss_pred CcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHh
Confidence 44445555 4566666 88889999988888888866 778999999999999999999998777665443
Q ss_pred ee---eCCC--CCchHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHH
Q 014518 100 IV---TGRA--PVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILT 162 (423)
Q Consensus 100 ~~---~g~i--~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s 162 (423)
+. .... +...++.+.++-++.|.+.+.....+.....+.+| ++||.+.|+.-....++..+-.
T Consensus 105 ~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~ 173 (479)
T PRK10077 105 PEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVY 173 (479)
T ss_pred hccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHH
Confidence 21 1111 11124556677788999999988888888899998 5699999998888878876643
No 65
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.70 E-value=6.7e-06 Score=84.78 Aligned_cols=137 Identities=16% Similarity=0.190 Sum_probs=95.2
Q ss_pred hhhcCcchhHHHHHHHHhhccccc-ccccchhhhhhccCcchhHHHhhhh-ccccccccccccchhhhhhhhHHHHHHHH
Q 014518 10 SFFNNRWLVFVAAMWIQSCAGIGY-LFGSISPVIKSSLNYNQKQIARLGV-AKDLGDSVGFLAGSLCEVLPIWGALLVGA 87 (423)
Q Consensus 10 ~~~~~Rw~~l~a~~~i~l~~Gt~Y-~Fs~yS~~Lk~~l~~sq~~l~~i~~-a~~vG~~~g~~~G~l~D~~gP~~vl~iG~ 87 (423)
+++++||+.|++-.+...+.|... .|+........-|+ +-+..+..+. ..-+..-+|+++=++.|++|-|..+++|+
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt 116 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGT 116 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHH
Confidence 688999999999999888887643 45555566677788 3333333333 23344456888889999999999999999
Q ss_pred hhhhhcceeeeeeeeCCCCCchHHH--HhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeE
Q 014518 88 LQNFIGYGWVWLIVTGRAPVLPLWA--MCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVG 148 (423)
Q Consensus 88 ~~~~~Gy~~~~l~~~g~i~~~~~~~--l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvg 148 (423)
+++.+|...=-.+..-.+++ ..|+ +-.=..+.+..+.++..-.-+-+..||| ++|-+|..
T Consensus 117 ~ln~iGa~Ir~iss~p~v~~-~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~ 179 (480)
T KOG2563|consen 117 VLNGIGAWIRLISSLPFVPP-LFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATV 179 (480)
T ss_pred HHHHHHHHHhhhccCccccc-cchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhh
Confidence 99999998754455544432 4552 2233345566666776666688899995 67876553
No 66
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=97.63 E-value=3e-06 Score=84.68 Aligned_cols=135 Identities=14% Similarity=0.124 Sum_probs=96.4
Q ss_pred ccccccccchhh-hhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCC
Q 014518 30 GIGYLFGSISPV-IKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPV 107 (423)
Q Consensus 30 Gt~Y~Fs~yS~~-Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~ 107 (423)
+..+.+..+.|. +++++|+++.+...+.....++..+ +++.|.+.||+|+|..+.++.+...++..+++...... .
T Consensus 220 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 297 (385)
T TIGR00710 220 GGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILG--L 297 (385)
T ss_pred HHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhc--c
Confidence 344555556565 4568999999998877767777755 77899999999999999988887777766554322111 1
Q ss_pred chHHHHhhheeeecCCceeeehhhhhhhhhcCCCCCCCeeEeeccccchhhHHHHHHHH
Q 014518 108 LPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYT 166 (423)
Q Consensus 108 ~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~~RG~vvgilk~~~GLSaaI~s~i~~ 166 (423)
.+.+.+....++.|.|.+...........+.+|++||++.++......+.+++.+.+-.
T Consensus 298 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~i~~~~~~ 356 (385)
T TIGR00710 298 GSWAMIIGPMMFVGIGNSMISSIAMAYALEDFPHVAGTASALFGTLRLVLGAIVGYLVS 356 (385)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 23334444455566777777777778888899999999999887776677777776644
No 67
>PRK09528 lacY galactoside permease; Reviewed
Probab=97.62 E-value=6.1e-06 Score=84.70 Aligned_cols=181 Identities=14% Similarity=0.160 Sum_probs=100.9
Q ss_pred CcchhHHHHHHHHhhcccccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhh
Q 014518 14 NRWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFI 92 (423)
Q Consensus 14 ~Rw~~l~a~~~i~l~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~ 92 (423)
+-|...++-.....+.| ..++..+..+++++|+|++|..++.....++..+ .++.|.+.||+|+|.+++++.....+
T Consensus 11 ~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~ 88 (420)
T PRK09528 11 NYWIFSLFFFFFFFIWS--SWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLV 88 (420)
T ss_pred chHHHHHHHHHHHHHHH--HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHH
Confidence 34555444444444443 4578888889999999999999966666666644 88999999999999998887665444
Q ss_pred cceeeee-eeeCCCCCchHHHHhhhe-eeecCCceeeehhhhhhhhhcCCCCCCCeeEeeccccchhhHHHHHHHHHhcC
Q 014518 93 GYGWVWL-IVTGRAPVLPLWAMCILI-FVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (423)
Q Consensus 93 Gy~~~~l-~~~g~i~~~~~~~l~~f~-~l~g~g~~~~~ta~l~t~~~nFP~~RG~vvgilk~~~GLSaaI~s~i~~~~f~ 170 (423)
+...+.. .+.... ....+..+... .+.+.+... ....+.+-..+++++||.+.|.......++.++-..+.....+
T Consensus 89 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~ 166 (420)
T PRK09528 89 LFGPFFIYVFAPLL-QYNILLGAIVGGIYLGFGFLA-GAGAIEAYIERVSRRSGFEYGRARMWGSLGWALCAFIAGILFN 166 (420)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhcc-chhhhhhHHHHHHhhccccchhhHHhhhHHHHHHHHHHHHHHh
Confidence 3321111 111100 00121111111 111111111 1112223335567889999999998888888777666444433
Q ss_pred CCccceeeeeeechhhhhhhheeeEeccC
Q 014518 171 PDHANLIFMVAVGPAMVVIALMFIIRPVG 199 (423)
Q Consensus 171 ~~~~~fllfla~~~~~v~~~~~~fvr~~~ 199 (423)
-+.. ..+.+.....+++++..+++++++
T Consensus 167 ~~~~-~~f~~~~~~~~~~~~~~~~~~~~~ 194 (420)
T PRK09528 167 INPQ-INFWLGSGSALILLVLLFFAKPDA 194 (420)
T ss_pred cCch-HhHHHHHHHHHHHHHHHhcccccc
Confidence 2222 222223334444555555555443
No 68
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=97.54 E-value=8.2e-06 Score=79.52 Aligned_cols=134 Identities=22% Similarity=0.241 Sum_probs=106.2
Q ss_pred ccccccccchhhhhhc-cCcchhHHHhhhhcccccccc-ccccchhhhhhhhHH-HHHHHHhhhhhcceeeeeeeeCCCC
Q 014518 30 GIGYLFGSISPVIKSS-LNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWG-ALLVGALQNFIGYGWVWLIVTGRAP 106 (423)
Q Consensus 30 Gt~Y~Fs~yS~~Lk~~-l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~-vl~iG~~~~~~Gy~~~~l~~~g~i~ 106 (423)
.....+..|.+.+.++ +|++..+...+.....++..+ .++.|.+.||+|+|. ++.++.+...+++.++...-
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----- 263 (352)
T cd06174 189 FGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAP----- 263 (352)
T ss_pred hHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhc-----
Confidence 3345555666666655 499999999988888888866 678999999999999 99999999888877654321
Q ss_pred CchHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHHHHHHHhcC
Q 014518 107 VLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (423)
Q Consensus 107 ~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s~i~~~~f~ 170 (423)
+.|.+....++.+.+.+..+........+.+| ++||++.|+......+++.+...+.....+
T Consensus 264 --~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~ 326 (352)
T cd06174 264 --SLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLD 326 (352)
T ss_pred --cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 24556667777788888888888899999998 789999999999999998888888777764
No 69
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=97.52 E-value=1.1e-05 Score=82.32 Aligned_cols=138 Identities=15% Similarity=0.056 Sum_probs=87.1
Q ss_pred ccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeee---eeeCCC--
Q 014518 32 GYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWL---IVTGRA-- 105 (423)
Q Consensus 32 ~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l---~~~g~i-- 105 (423)
.+....|.+.+.+++|++..+...+.....++..+ .++.|.+.||+|+|..+.++.+...++..++.. ......
T Consensus 300 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (481)
T TIGR00879 300 INAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSK 379 (481)
T ss_pred CeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCccc
Confidence 44566778888889999997776666555555544 677899999999999999988877776655541 111110
Q ss_pred CCchHHHHhhheeeecCCceeeehhhhhhhhhcCCC-CCCCeeEeeccccchhhHHHHHHHHHhcC
Q 014518 106 PVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (423)
Q Consensus 106 ~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~-~RG~vvgilk~~~GLSaaI~s~i~~~~f~ 170 (423)
.....+......+..+.+.++. ......+.+.||. +||++.|+.-....+++++...+...+.+
T Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~ 444 (481)
T TIGR00879 380 SSGNVAIVFILLFIAFFAMGWG-PVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLE 444 (481)
T ss_pred chhHHHHHHHHHHHHHHHcccc-CeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0012222111112222222221 1122334677875 79999999999999998888877666554
No 70
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=97.51 E-value=4.3e-06 Score=86.17 Aligned_cols=125 Identities=14% Similarity=0.104 Sum_probs=88.9
Q ss_pred cccccccchhhhhhccCcchhHHHhhhhccccccc-cccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCch
Q 014518 31 IGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDS-VGFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLP 109 (423)
Q Consensus 31 t~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~-~g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~ 109 (423)
+...+.---|++.+.+|.|+++.+......-+|.. ..++.|.+.||+|+|.+++++.+...+|......+ ++
T Consensus 31 ~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a-------~~ 103 (413)
T PRK15403 31 TTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFT-------TS 103 (413)
T ss_pred HHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHc-------CC
Confidence 33444444456788999999999985555556664 47889999999999999999988877776553321 25
Q ss_pred HHHHhhheeeecCCceeeehhhhhhhhhcCCC-CCCCeeEeeccccchhhHHHH
Q 014518 110 LWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAILT 162 (423)
Q Consensus 110 ~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~-~RG~vvgilk~~~GLSaaI~s 162 (423)
++.+.+.-++.|.+.++....+.......||+ +|+.+.++.-...+++..+-.
T Consensus 104 ~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 157 (413)
T PRK15403 104 MTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGP 157 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66677777777777776555555556678885 578888888777777765543
No 71
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.46 E-value=5.2e-06 Score=86.97 Aligned_cols=138 Identities=13% Similarity=0.035 Sum_probs=105.9
Q ss_pred hHHHHHHHHhhcccccccccchhhhhhccCcchhH-HHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcce
Q 014518 18 VFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQ-IARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYG 95 (423)
Q Consensus 18 ~l~a~~~i~l~~Gt~Y~Fs~yS~~Lk~~l~~sq~~-l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~ 95 (423)
.++.|++ ....-.--..++-.|.|++.+|+|.+| .+.|..+...|-.+ -+|+|++.||+|+|+++.++++...+-..
T Consensus 29 ~~~lC~f-GF~~e~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~ 107 (511)
T TIGR00806 29 VLYLCFY-GFMAQFRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWL 107 (511)
T ss_pred HHHHHHH-HHHHHhhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHH
Confidence 3334444 233334445666788999999999999 77777777776644 78999999999999999999988655555
Q ss_pred eeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHHHH
Q 014518 96 WVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQV 164 (423)
Q Consensus 96 ~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s~i 164 (423)
++.. . .+++.|.+.-++.|.+.+... |+.....++|| ++||+++|+..+..-+|.++-..+
T Consensus 108 L~~f-----a--~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L 169 (511)
T TIGR00806 108 LLLL-----G--TSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVL 169 (511)
T ss_pred HHHH-----H--HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4322 1 257788888899999999888 99999999998 679999999988888777665433
No 72
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=97.43 E-value=3.9e-05 Score=80.84 Aligned_cols=124 Identities=10% Similarity=-0.023 Sum_probs=89.4
Q ss_pred ccchhhhhhc--cCcchhHHHhhhhcccccccc-ccccchhhhh-hhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHH
Q 014518 36 GSISPVIKSS--LNYNQKQIARLGVAKDLGDSV-GFLAGSLCEV-LPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLW 111 (423)
Q Consensus 36 s~yS~~Lk~~--l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~-~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~ 111 (423)
+....-++++ +|+++.|...+.....++..+ .+++|.+.|| +|+|.++++|.+...+|+.++.+. + +++
T Consensus 31 ~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~-----~--~~~ 103 (475)
T TIGR00924 31 GILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMS-----I--YPD 103 (475)
T ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhc-----c--cHh
Confidence 3344456777 999999999966666666655 6789999999 899999999999999999876542 1 233
Q ss_pred HHhhheeeecCCceeeehhhhhhhhhcCCCC----CCCeeEeeccccchhhHHHHHHHH
Q 014518 112 AMCILIFVGNNGETYFNTAALVSCVQNFPKS----RGPVVGILKGFAGLGGAILTQVYT 166 (423)
Q Consensus 112 ~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~~----RG~vvgilk~~~GLSaaI~s~i~~ 166 (423)
.+.+..++.|.|.+.+..+......+.||++ |+.+.++.-....+++++=..+..
T Consensus 104 ~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g 162 (475)
T TIGR00924 104 LIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAG 162 (475)
T ss_pred HHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHH
Confidence 4444445567788777766666777889743 888888766666666655444433
No 73
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=97.43 E-value=6.4e-06 Score=95.27 Aligned_cols=148 Identities=8% Similarity=-0.070 Sum_probs=94.0
Q ss_pred hcCcchhHHHHHHHHhhccccccccc--ch-hhhhhccCcchhHH-Hhhhhcccccc-ccccccchhhhhhhhHHHHHH-
Q 014518 12 FNNRWLVFVAAMWIQSCAGIGYLFGS--IS-PVIKSSLNYNQKQI-ARLGVAKDLGD-SVGFLAGSLCEVLPIWGALLV- 85 (423)
Q Consensus 12 ~~~Rw~~l~a~~~i~l~~Gt~Y~Fs~--yS-~~Lk~~l~~sq~~l-~~i~~a~~vG~-~~g~~~G~l~D~~gP~~vl~i- 85 (423)
..+||..+..+-++...+-..+.+.+ +. .++....+.++.++ +++..+.-++. .+++++|.+.||+|+|.++.+
T Consensus 9 ~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~ 88 (1140)
T PRK06814 9 KSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKIL 88 (1140)
T ss_pred hccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHH
Confidence 35567777666666554433333332 21 24444555544453 33444444554 558899999999999876421
Q ss_pred -HHhhhhhcceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHHH
Q 014518 86 -GALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQ 163 (423)
Q Consensus 86 -G~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s~ 163 (423)
.+.....+...+ ++ . ..++|.+.+..++.|.+.+++..+......+++| ++|+.+.|+.-+...++..+-..
T Consensus 89 ~~~~~~~~~~~~~--~~---~-~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~ 162 (1140)
T PRK06814 89 KFAEIGIAALAIY--GF---H-LNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTI 162 (1140)
T ss_pred HHHHHHHHHHHHH--HH---H-HhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHH
Confidence 221111221111 11 0 1368888999999999999999999999999997 56899999999988887776644
Q ss_pred HH
Q 014518 164 VY 165 (423)
Q Consensus 164 i~ 165 (423)
+.
T Consensus 163 l~ 164 (1140)
T PRK06814 163 IG 164 (1140)
T ss_pred HH
Confidence 43
No 74
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=97.40 E-value=2.7e-05 Score=80.80 Aligned_cols=126 Identities=18% Similarity=0.248 Sum_probs=95.5
Q ss_pred hhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHhhheeee
Q 014518 42 IKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVG 120 (423)
Q Consensus 42 Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~ 120 (423)
+++.+|++..+...+.....++..+ .++.|.+.||+|+|.++.+|.+...+|+.+++..+.... +.|.+....++.
T Consensus 282 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~ 358 (485)
T TIGR00711 282 LQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDT---PFLAIALPQFIR 358 (485)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCC---CHHHHHHHHHHH
Confidence 4567899999998877766777655 678999999999999999999998888887664433222 344445556677
Q ss_pred cCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHHHHHHHhcC
Q 014518 121 NNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (423)
Q Consensus 121 g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s~i~~~~f~ 170 (423)
|.|.+..........+..+| ++||.+.|+.-....+++++-..+...++.
T Consensus 359 g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~ 409 (485)
T TIGR00711 359 GFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILT 409 (485)
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78887777666677778898 679999999988888888777666665543
No 75
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=97.40 E-value=9.7e-05 Score=78.23 Aligned_cols=141 Identities=15% Similarity=0.109 Sum_probs=93.3
Q ss_pred CcchhHHHHHHHHhhccccc-cc-ccchhhhhhccCcchhHHHhhhhcccccc-ccccccchhhhh-hhhHHHHHHHHhh
Q 014518 14 NRWLVFVAAMWIQSCAGIGY-LF-GSISPVIKSSLNYNQKQIARLGVAKDLGD-SVGFLAGSLCEV-LPIWGALLVGALQ 89 (423)
Q Consensus 14 ~Rw~~l~a~~~i~l~~Gt~Y-~F-s~yS~~Lk~~l~~sq~~l~~i~~a~~vG~-~~g~~~G~l~D~-~gP~~vl~iG~~~ 89 (423)
+.|..+.....+..+-..+| .. +....-+++.+|+++++...+..+..... .+.+++|.+.|| +|+|.++++|.+.
T Consensus 11 ~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~ 90 (489)
T PRK10207 11 QQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIV 90 (489)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHH
Confidence 34555555555555544333 22 33445567889999999988655444344 446789999999 9999999999999
Q ss_pred hhhcceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCCCC---CCCeeEeeccccchhhHH
Q 014518 90 NFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKS---RGPVVGILKGFAGLGGAI 160 (423)
Q Consensus 90 ~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~~---RG~vvgilk~~~GLSaaI 160 (423)
..+|+.+..++-+ . ...+.+..++.+.|.+.+.........+.||++ |+.+.++.-....+++++
T Consensus 91 ~~~g~~~~~~~~~----~--~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~ 158 (489)
T PRK10207 91 LAIGYFMTGMSLL----K--PDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLI 158 (489)
T ss_pred HHHHHHHHHHhcc----c--hhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHH
Confidence 9999988665321 1 112323445567888877766677778899754 366666665566666553
No 76
>PRK10489 enterobactin exporter EntS; Provisional
Probab=97.38 E-value=1.2e-05 Score=82.37 Aligned_cols=149 Identities=15% Similarity=0.122 Sum_probs=89.4
Q ss_pred chhhh-hhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHhh
Q 014518 38 ISPVI-KSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCI 115 (423)
Q Consensus 38 yS~~L-k~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~ 115 (423)
+-|.+ ++.+|++..+...+.....+|..+ +++.|++.|+.+++..+.++.+...++..++.. . ++++.+++
T Consensus 245 ~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~-----~--~~~~~~~~ 317 (417)
T PRK10489 245 LYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGL-----M--PMWILAVL 317 (417)
T ss_pred hhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHc-----c--chHHHHHH
Confidence 33444 555999998888876666677655 678899999988887888887777777655432 1 23445555
Q ss_pred heeeecCCceeeehhhhhhhhhcCCC-CCCCeeEeeccccchhhHHHHHHHHHhcCC-Cccceeeeeeechhhhhhhhee
Q 014518 116 LIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAILTQVYTMIHAP-DHANLIFMVAVGPAMVVIALMF 193 (423)
Q Consensus 116 f~~l~g~g~~~~~ta~l~t~~~nFP~-~RG~vvgilk~~~GLSaaI~s~i~~~~f~~-~~~~fllfla~~~~~v~~~~~~ 193 (423)
..++.|.+.+...........+.+|+ .||++.|+.....-++.++=..+.-.+.+. +....++..+....+++++...
T Consensus 318 ~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 397 (417)
T PRK10489 318 CLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLL 397 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH
Confidence 55556666655544444556678885 599999998665544443333333332221 2233333344444444444433
No 77
>PRK10489 enterobactin exporter EntS; Provisional
Probab=97.35 E-value=2.7e-06 Score=87.16 Aligned_cols=124 Identities=17% Similarity=0.036 Sum_probs=89.2
Q ss_pred ccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeee-eeeCCCCCchHH
Q 014518 34 LFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWL-IVTGRAPVLPLW 111 (423)
Q Consensus 34 ~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l-~~~g~i~~~~~~ 111 (423)
....+-|.+.++++.+..+...+.....++..+ .++.|.+.||+|+|.++.++.++..+++.++.. .+. ..+++|
T Consensus 35 ~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~ 111 (417)
T PRK10489 35 LLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFL---PEPSLL 111 (417)
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHc---CCCcHH
Confidence 334556777778889999999988888888866 688999999999999998888776666654322 111 123466
Q ss_pred HHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHH
Q 014518 112 AMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAI 160 (423)
Q Consensus 112 ~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI 160 (423)
.+.+..++.|.+.+....+......+.+| ++||.+.++.....+++..+
T Consensus 112 ~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 161 (417)
T PRK10489 112 AIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVI 161 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHh
Confidence 66666666677766666666667778887 56899998877666655544
No 78
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.32 E-value=4.8e-05 Score=77.68 Aligned_cols=130 Identities=17% Similarity=0.182 Sum_probs=105.7
Q ss_pred ccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHh
Q 014518 36 GSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMC 114 (423)
Q Consensus 36 s~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~ 114 (423)
.+-=|++|+.+++|+.|.+.+-++--.|=.+ ++|.|++.+|+|-|.-+++|..+..+|..++|-+-..+. +-..+
T Consensus 33 diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~----y~~FL 108 (422)
T COG0738 33 DILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKS----YGFFL 108 (422)
T ss_pred hhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhh----HHHHH
Confidence 4567999999999999999988765444322 889999999999999999999999999999886655543 44556
Q ss_pred hheeeecCCceeeehhhhhhhhhcCCC-CCCCeeEeeccccchhhHHHHHHHHHhc
Q 014518 115 ILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAILTQVYTMIH 169 (423)
Q Consensus 115 ~f~~l~g~g~~~~~ta~l~t~~~nFP~-~RG~vvgilk~~~GLSaaI~s~i~~~~f 169 (423)
.-.++.+.|.+..+||+-.-...+.|. +.-.=..++.+++||++.+--.+-..+.
T Consensus 109 ~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~li 164 (422)
T COG0738 109 VALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLI 164 (422)
T ss_pred HHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 666788999999999999999999975 4444578899999999998866655543
No 79
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=97.30 E-value=1.4e-05 Score=84.23 Aligned_cols=163 Identities=11% Similarity=0.067 Sum_probs=86.5
Q ss_pred hcccccccccchhhh-hhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhh-cceeeeeeeeCC
Q 014518 28 CAGIGYLFGSISPVI-KSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFI-GYGWVWLIVTGR 104 (423)
Q Consensus 28 ~~Gt~Y~Fs~yS~~L-k~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~-Gy~~~~l~~~g~ 104 (423)
.....|.+..|.|.. ++.+|++..+...+.....+|..+ .+..|.+.||+|+|.++.++.+...+ ++..+.....+
T Consensus 262 ~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~- 340 (490)
T PRK10642 262 TNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSN- 340 (490)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCC-
Confidence 345667777888874 567899988776666666677766 45689999999999998888764332 23222211111
Q ss_pred CCCchHHHHhhheeeecCCceeeehhhhhhhhhcCCC-CCCCeeEeeccccchhhHHHHHHHHHhcCCCccce-eeeeee
Q 014518 105 APVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAILTQVYTMIHAPDHANL-IFMVAV 182 (423)
Q Consensus 105 i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~-~RG~vvgilk~~~GLSaaI~s~i~~~~f~~~~~~f-llfla~ 182 (423)
+.+.+.+..++.+.+.+.............||. .||+++|+.-...-+.+.+...+.....+...+.+ ..++..
T Consensus 341 ----~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~ 416 (490)
T PRK10642 341 ----VIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLM 416 (490)
T ss_pred ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHH
Confidence 222222222222222222212222233357985 69998887555433444333333222222111111 111233
Q ss_pred chhhhhhhheeeE
Q 014518 183 GPAMVVIALMFII 195 (423)
Q Consensus 183 ~~~~v~~~~~~fv 195 (423)
.+.+++++..+++
T Consensus 417 ~~~~i~~~~~~~~ 429 (490)
T PRK10642 417 VVAVIGLITGVTM 429 (490)
T ss_pred HHHHHHHHHHHHh
Confidence 4556666666655
No 80
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.30 E-value=0.00017 Score=76.56 Aligned_cols=142 Identities=16% Similarity=0.066 Sum_probs=86.7
Q ss_pred hhHHHHHHHHhhcc-cccccccchh-hhhhccCcchhHHHhhhhcccccccc-ccccchhhhhh-hhHHHHHHHHhhhhh
Q 014518 17 LVFVAAMWIQSCAG-IGYLFGSISP-VIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVL-PIWGALLVGALQNFI 92 (423)
Q Consensus 17 ~~l~a~~~i~l~~G-t~Y~Fs~yS~-~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~-gP~~vl~iG~~~~~~ 92 (423)
..+.....++.+.. +.|....+-+ -|++.+|+++.+...+.....++.++ .+++|.+.||+ |+|.++++|+++..+
T Consensus 9 ~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~l 88 (493)
T PRK15462 9 RAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAI 88 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHH
Confidence 33333444444433 4555544444 45677999999999876666666665 66899999999 999999999999999
Q ss_pred cceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCCC---CCCCeeEeeccccchhhHHHHHH
Q 014518 93 GYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPK---SRGPVVGILKGFAGLGGAILTQV 164 (423)
Q Consensus 93 Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~---~RG~vvgilk~~~GLSaaI~s~i 164 (423)
|+.++.. .+. .+....+.+.....|+|....+..+ ...+.||+ .|+++.++.-....+++.+-..+
T Consensus 89 g~lll~~--~~~--~~~~~~l~l~li~iG~G~~~~~~~a--lv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l 157 (493)
T PRK15462 89 GHVVLGA--SEI--HPSFLYLSLAIIVCGYGLFKSNVSC--LLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIA 157 (493)
T ss_pred HHHHHHH--hhc--chhHHHHHHHHHHHhcccccccHHH--HHHHHCCCCCccccceehHHHHHHHHHHHHHHHH
Confidence 9876532 111 1122222222222334333322223 34677985 48888887777666655444333
No 81
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=97.28 E-value=5e-05 Score=80.15 Aligned_cols=127 Identities=10% Similarity=0.057 Sum_probs=94.5
Q ss_pred hhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHhhhe
Q 014518 39 SPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILI 117 (423)
Q Consensus 39 S~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~ 117 (423)
...+++.+|+|..+....-....++..+ +++.|.+.||+|+|.++.+|.++..+|+.++... +.. . +.|....+.
T Consensus 283 ~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~--~~~-~-~~~~~~~~~ 358 (495)
T PRK14995 283 AQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMT--DFS-T-QQWQAWGLM 358 (495)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHh--cCC-C-chHHHHHHH
Confidence 3457888999999998866666666644 6789999999999999999998888888765432 211 1 345556677
Q ss_pred eeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHHHHHHHhc
Q 014518 118 FVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIH 169 (423)
Q Consensus 118 ~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s~i~~~~f 169 (423)
++.|.|.+..........+.+.| ++||.+.++......+++++=..+...++
T Consensus 359 ~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~ 411 (495)
T PRK14995 359 ALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLL 411 (495)
T ss_pred HHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78889988888888888889998 56899999887777666655554444443
No 82
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=97.26 E-value=2.2e-05 Score=79.78 Aligned_cols=133 Identities=17% Similarity=0.149 Sum_probs=90.4
Q ss_pred cccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCch
Q 014518 31 IGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLP 109 (423)
Q Consensus 31 t~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~ 109 (423)
..|.+..|.|.+-+.+|++..+...+.....++..+ .++.|.+.||+|+|..+.++.+...++...+.. .+ +
T Consensus 235 ~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~-----~~--~ 307 (406)
T PRK11551 235 VLYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAA-----AP--S 307 (406)
T ss_pred HHHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh-----cC--c
Confidence 345555667777777899999988877666677655 778999999999998887766655555443221 11 2
Q ss_pred HHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHHHHHHHhcC
Q 014518 110 LWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (423)
Q Consensus 110 ~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s~i~~~~f~ 170 (423)
.+.+.+..++.|.+....++.......+.+| ++||++.|+.-...++++++-..+.-.+.+
T Consensus 308 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~ 369 (406)
T PRK11551 308 FAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLA 369 (406)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhc
Confidence 3334444444444444445555556677887 579999999999999988776666555543
No 83
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=97.21 E-value=7.5e-05 Score=79.21 Aligned_cols=127 Identities=13% Similarity=0.029 Sum_probs=81.3
Q ss_pred ccccc-chhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhh-hhhHHHHHHHHhhhhhcceeeeeeeeCCCCCch
Q 014518 33 YLFGS-ISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEV-LPIWGALLVGALQNFIGYGWVWLIVTGRAPVLP 109 (423)
Q Consensus 33 Y~Fs~-yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~-~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~ 109 (423)
|.+.. ....+++.+|+|+++...+........+. .+++|.+.|| +|+|.++++|.+...+|+.++.++-. .
T Consensus 38 y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~------~ 111 (500)
T PRK09584 38 YGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGH------D 111 (500)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcc------c
Confidence 44444 34556789999999887755443333333 4689999999 59999999999999999887654311 1
Q ss_pred HHHHhhheeeecCCceeeehhhhhhhhhcCCCC---CCCeeEeeccccchhhHHHHHHH
Q 014518 110 LWAMCILIFVGNNGETYFNTAALVSCVQNFPKS---RGPVVGILKGFAGLGGAILTQVY 165 (423)
Q Consensus 110 ~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~~---RG~vvgilk~~~GLSaaI~s~i~ 165 (423)
.+.+.+...+.+.|.+...........+.||++ |+.+.++.-....+++++-..+.
T Consensus 112 ~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~ 170 (500)
T PRK09584 112 AGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLAT 170 (500)
T ss_pred HHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHH
Confidence 223333334556677766665556678889854 33455655555666665443333
No 84
>PRK15011 sugar efflux transporter B; Provisional
Probab=97.21 E-value=2.1e-05 Score=80.17 Aligned_cols=126 Identities=13% Similarity=0.041 Sum_probs=72.9
Q ss_pred cccccccchh-hhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCc
Q 014518 31 IGYLFGSISP-VIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVL 108 (423)
Q Consensus 31 t~Y~Fs~yS~-~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~ 108 (423)
..+.|..+.| -+++.+|+++++...+.....++..+ .++.|.+.||+|+|..+.++.+...+....+. +.+
T Consensus 231 ~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~--~~~----- 303 (393)
T PRK15011 231 TNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGML--MAH----- 303 (393)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH--HHh-----
Confidence 3444555555 46778999999888754443343333 57899999999999888777665444432221 111
Q ss_pred hHHHHhhheeeecCCceeeehhhhhhhhhcCCCCCCCeeEeeccccchhhHHHHH
Q 014518 109 PLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQ 163 (423)
Q Consensus 109 ~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~~RG~vvgilk~~~GLSaaI~s~ 163 (423)
+.+.+.++.++.+.+.+...........+.+|++||++.++.-....+++++-..
T Consensus 304 ~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~lg~~~g~~ 358 (393)
T PRK15011 304 SPAILLGLQLLNAIYIGILGGIGMLYFQDLMPGQAGSATTLYTNTSRVGWIIAGS 358 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHHH
Confidence 1222222223332222222222223345678999999999876666655544433
No 85
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=97.20 E-value=9.6e-05 Score=77.70 Aligned_cols=162 Identities=11% Similarity=0.026 Sum_probs=86.2
Q ss_pred cccccccccchhh-hhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhH-------HHHHHHHhhhhhcceeeee
Q 014518 29 AGIGYLFGSISPV-IKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIW-------GALLVGALQNFIGYGWVWL 99 (423)
Q Consensus 29 ~Gt~Y~Fs~yS~~-Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~-------~vl~iG~~~~~~Gy~~~~l 99 (423)
.+..+.+..+.|. +++.+|++..+...+.....++..+ .+++|.+.||++.| ..+.+..++ .|...+.+
T Consensus 265 ~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l--~~i~~~~~ 342 (476)
T PLN00028 265 FGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTL--GGVFCIWL 342 (476)
T ss_pred HHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHH--HHHHHHHh
Confidence 3333444444443 5778899999988877766676655 67899999999865 232232222 22222222
Q ss_pred eeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCCCCCCCeeEeeccccchhhHHHHHHHHHhcCCCccce--e
Q 014518 100 IVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIHAPDHANL--I 177 (423)
Q Consensus 100 ~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~~RG~vvgilk~~~GLSaaI~s~i~~~~f~~~~~~f--l 177 (423)
...+.. ...+..++++.+..+.+.+ +.........|++||++.|+.-....+++.+...++.. .+..+| -
T Consensus 343 ~~~~~~-~~~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~~~g~~~g~~~~~g~lg~~i~~~l~~~---~~~~~y~~~ 414 (476)
T PLN00028 343 GRANSL-GAAIVVMILFSIFVQAACG----ATFGIVPFVSRRSLGVISGLTGAGGNVGAVLTQLLFFT---GSSYSTETG 414 (476)
T ss_pred cccchH-HHHHHHHHHHHHHHHHhhh----hhcccCcccChhhchhhhhhhhccccHHHHHHHHHHHh---cCCccHhhH
Confidence 222211 0012122222222111111 11111123358899999999977666788787766531 122122 1
Q ss_pred eeeeechhhhhhhheeeEeccCC
Q 014518 178 FMVAVGPAMVVIALMFIIRPVGG 200 (423)
Q Consensus 178 lfla~~~~~v~~~~~~fvr~~~~ 200 (423)
+++.....+++.+..+++|.+..
T Consensus 415 f~~~~~~~~i~~~~~~~~~~~~~ 437 (476)
T PLN00028 415 ISLMGVMIIACTLPVAFIHFPQW 437 (476)
T ss_pred HHHHHHHHHHHHHHHHheeccch
Confidence 22223455677788888886554
No 86
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=97.20 E-value=2.6e-05 Score=82.09 Aligned_cols=133 Identities=14% Similarity=0.040 Sum_probs=87.1
Q ss_pred hHHHHHHHHhhccccccccc---chhhhhhccCcchhH-HHhhh-----hcccccccc-ccccchhhhhhhhHHHHHHHH
Q 014518 18 VFVAAMWIQSCAGIGYLFGS---ISPVIKSSLNYNQKQ-IARLG-----VAKDLGDSV-GFLAGSLCEVLPIWGALLVGA 87 (423)
Q Consensus 18 ~l~a~~~i~l~~Gt~Y~Fs~---yS~~Lk~~l~~sq~~-l~~i~-----~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~ 87 (423)
.++++.+....-+ |.|.+ ..+.+++.++.+.++ .+.++ .+.-+|..+ +++.|.+.||+|+|.++.++.
T Consensus 17 ~~~~~~~g~~~~~--~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 17 AITAASLGNAMEW--FDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHH--HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 3333333333333 44444 467778887644432 12222 223355544 778999999999999999999
Q ss_pred hhhhhcceeeeeeeeCCCCCchH---HHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeecccc
Q 014518 88 LQNFIGYGWVWLIVTGRAPVLPL---WAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFA 154 (423)
Q Consensus 88 ~~~~~Gy~~~~l~~~g~i~~~~~---~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~ 154 (423)
++..++-++..++-+ .....+ ++++++-++.|.|.+....++.....++|| ++||.+.++.....
T Consensus 95 ~l~~i~~~~~a~~~~--~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~ 163 (490)
T PRK10642 95 VIMSISTFCIGLIPS--YATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGS 163 (490)
T ss_pred HHHHHHHHHHHhccc--HHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHH
Confidence 998887776433211 100001 246777888999999999999999999997 68999988876443
No 87
>PRK03545 putative arabinose transporter; Provisional
Probab=97.18 E-value=3.1e-05 Score=78.58 Aligned_cols=115 Identities=12% Similarity=0.103 Sum_probs=71.4
Q ss_pred hhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHhhhe
Q 014518 39 SPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILI 117 (423)
Q Consensus 39 S~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~ 117 (423)
.+-+++++|+|+.+...+.....++..+ .++.|.+.||+|.|.. .++......+...+.. . . .+.+.+++..
T Consensus 229 ~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~-~~~~~~~~~~~~~l~~-~---~--~~~~~~~~~~ 301 (390)
T PRK03545 229 EPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFL-LIAIALLLVCLLLLLP-A---A--NSEWHLSVLS 301 (390)
T ss_pred HHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHH-HHHHHHHHHHHHHHHH-H---h--chHHHHHHHH
Confidence 4556778999999888766555556544 6778999999998765 4555444444332211 1 1 1344555555
Q ss_pred eeecCCceeeehhhhhhhhhcCCCCCCCeeEeeccccchhhHH
Q 014518 118 FVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAI 160 (423)
Q Consensus 118 ~l~g~g~~~~~ta~l~t~~~nFP~~RG~vvgilk~~~GLSaaI 160 (423)
++.|.+.......-.....+..|++||.+.|+.-+..-++.++
T Consensus 302 ~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~ 344 (390)
T PRK03545 302 IFWGIAIMCIGLAMQVKVLKLAPDATDVAMALFSGIFNIGIGA 344 (390)
T ss_pred HHHHHHHhcchHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHH
Confidence 5555555444444444555678999999888777655444433
No 88
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=97.16 E-value=3.2e-05 Score=78.37 Aligned_cols=109 Identities=13% Similarity=0.024 Sum_probs=68.8
Q ss_pred hhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhH----HHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHhh
Q 014518 41 VIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIW----GALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCI 115 (423)
Q Consensus 41 ~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~----~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~ 115 (423)
...+++|.|.+|...+..+..++..+ +++.|.+.||+|++ ..+.++++...+++. . ...++|++.+
T Consensus 29 ~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~-------~--~~~~~~~l~i 99 (382)
T PRK11128 29 VWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFAVAFW-------F--GAHSFWLLFV 99 (382)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHH-------H--hcccHHHHHH
Confidence 45566899999999977777777644 88899999999972 233334433222221 1 1235777776
Q ss_pred heeeecCCceeeehhhhhhhhhcCCCCCCCeeEeeccccchhhH
Q 014518 116 LIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGA 159 (423)
Q Consensus 116 f~~l~g~g~~~~~ta~l~t~~~nFP~~RG~vvgilk~~~GLSaa 159 (423)
...+.+.+.+....+ ..+.+..++++|+.+.|.......++.+
T Consensus 100 ~~~l~g~~~~~~~~~-~~a~~~~~~~~~~~a~~~~~~~~~lg~~ 142 (382)
T PRK11128 100 AIGLFNLFFSPLVPL-TDALANTWQKQIGLDYGKVRLWGSIAFV 142 (382)
T ss_pred HHHHHHHHHcccccH-HHHHHHHHHhhccCCcchHHHHHHHHHH
Confidence 666666655554443 3344556678899888776655544433
No 89
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=97.16 E-value=3.2e-05 Score=78.47 Aligned_cols=112 Identities=13% Similarity=-0.001 Sum_probs=68.4
Q ss_pred hhhhhccCcchhHHHhhhhcccccc-ccccccchhhhhhhhH----HHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHh
Q 014518 40 PVIKSSLNYNQKQIARLGVAKDLGD-SVGFLAGSLCEVLPIW----GALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMC 114 (423)
Q Consensus 40 ~~Lk~~l~~sq~~l~~i~~a~~vG~-~~g~~~G~l~D~~gP~----~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~ 114 (423)
|.+.+.+|+|.+|+..+.....+.. ..+++.|.+.||+|+| .++.++.++..+.+. ... .++|.+.
T Consensus 28 ~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~-------~~~--~~~~~l~ 98 (382)
T TIGR00902 28 PAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFS-------AGA--HNAWLLF 98 (382)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHH-------Hhh--hhHHHHH
Confidence 3777789999999999766655665 4488899999999964 333344433222111 111 2466655
Q ss_pred hheeeecCCceeeehhhhhhhhhcCCCCCCCeeEeeccccchhhHHH
Q 014518 115 ILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAIL 161 (423)
Q Consensus 115 ~f~~l~g~g~~~~~ta~l~t~~~nFP~~RG~vvgilk~~~GLSaaI~ 161 (423)
+...+.+.+.+.... ...+.+++++++||.+.|..-....++..+-
T Consensus 99 ~~~~l~~~~~~~~~p-~~~al~~~~~~~~~~~~g~~~~~~slG~~~g 144 (382)
T TIGR00902 99 IAIGLFALFFSAGMP-IGDALANTWQKQFGLDYGKVRLIGSAAFIIG 144 (382)
T ss_pred HHHHHHHHHHccchh-HHHHHHHHHHHHcCCCccHHHHHHHHHHHHH
Confidence 544443333333222 2333456778899999998777766655554
No 90
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=97.11 E-value=6e-05 Score=76.23 Aligned_cols=121 Identities=18% Similarity=0.066 Sum_probs=79.9
Q ss_pred ccccchhhhhhccCcchhHH-----Hhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCC
Q 014518 34 LFGSISPVIKSSLNYNQKQI-----ARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPV 107 (423)
Q Consensus 34 ~Fs~yS~~Lk~~l~~sq~~l-----~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~ 107 (423)
.+..+-|.+.+++|++..+. ..+.....++..+ +++.|.+.||+|+|.++.++.+...++..+++. .
T Consensus 32 ~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~-----~-- 104 (408)
T PRK09874 32 LVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGL-----A-- 104 (408)
T ss_pred HhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHH-----H--
Confidence 34556677777888886553 3444444455534 778999999999999999999887777765432 1
Q ss_pred chHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHH
Q 014518 108 LPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILT 162 (423)
Q Consensus 108 ~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s 162 (423)
.++|.+.+..++.|.+.++. ..+.....+.+| ++||.+.|+......++..+-.
T Consensus 105 ~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 159 (408)
T PRK09874 105 QNIWQFLILRALLGLLGGFV-PNANALIATQVPRNKSGWALGTLSTGGVSGALLGP 159 (408)
T ss_pred hhHHHHHHHHHHHHHhhhhH-HhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHH
Confidence 24556666555666655443 334444556776 6789999988776666554433
No 91
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=97.10 E-value=3.1e-05 Score=80.01 Aligned_cols=120 Identities=12% Similarity=0.067 Sum_probs=66.4
Q ss_pred cccccccchhh-hhhccCcchhHHHhhhhccccc-cccccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCc
Q 014518 31 IGYLFGSISPV-IKSSLNYNQKQIARLGVAKDLG-DSVGFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVL 108 (423)
Q Consensus 31 t~Y~Fs~yS~~-Lk~~l~~sq~~l~~i~~a~~vG-~~~g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~ 108 (423)
..|.+..|-|. +++.+|+++++...+.....++ ...+++.|.+.||+|+|.++.++++...+....+..... ....
T Consensus 258 ~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~-~~~~- 335 (432)
T PRK10406 258 CFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQ-NVSS- 335 (432)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHH-cCCc-
Confidence 45667777776 5677899998887644433333 344778899999999998887776643322221111111 1111
Q ss_pred hHHHHhhheeeecCCceeeehhhhhhhhhcCCC-CCCCeeEeeccc
Q 014518 109 PLWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGF 153 (423)
Q Consensus 109 ~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~-~RG~vvgilk~~ 153 (423)
+++.+.+ ..+...+.++..........+.||. .||++.|+.-+.
T Consensus 336 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~ 380 (432)
T PRK10406 336 PYAAFGL-VMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAV 380 (432)
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHH
Confidence 2222211 1111111111111122334578985 699999998654
No 92
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=97.07 E-value=1.4e-05 Score=81.85 Aligned_cols=132 Identities=14% Similarity=0.129 Sum_probs=95.4
Q ss_pred CcchhHHHHHHHHhhcccccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhh
Q 014518 14 NRWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFI 92 (423)
Q Consensus 14 ~Rw~~l~a~~~i~l~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~ 92 (423)
+.+..+..+.++...+...+.+.+ +.+.+.++.++.++..+..+..++..+ +++.|.+.||+|+|.+++++.+...+
T Consensus 3 ~~f~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~ 80 (393)
T PRK11195 3 KGFYAIMAAQFFSALADNALLFAA--IALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLL 80 (393)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHH--HHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHH
Confidence 345667777777666555554433 445677889999999888777777755 88999999999999999999988766
Q ss_pred cceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchh
Q 014518 93 GYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLG 157 (423)
Q Consensus 93 Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLS 157 (423)
+...+... .+ . .+.-++.|.+.++.+.+......+.+| ++|+++.|++-....++
T Consensus 81 ~~~~~~~~-----~~--~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~ 136 (393)
T PRK11195 81 GCLLMLFG-----IH--P---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAA 136 (393)
T ss_pred HHHHHHHH-----HH--H---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 65543211 11 1 122245788899999988889999998 67999999986655443
No 93
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=97.05 E-value=3e-05 Score=79.21 Aligned_cols=137 Identities=12% Similarity=0.050 Sum_probs=77.8
Q ss_pred ccccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHH-HHHhhhhhcceeeeeeeeCCCCC
Q 014518 30 GIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALL-VGALQNFIGYGWVWLIVTGRAPV 107 (423)
Q Consensus 30 Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~-iG~~~~~~Gy~~~~l~~~g~i~~ 107 (423)
...|.+..|.|..-+.+|++..+...+.....++..+ .++.|.+.||+|+|..+. .+.+...++...+++... ...
T Consensus 236 ~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~--~~~ 313 (402)
T TIGR00897 236 IGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQ--HFG 313 (402)
T ss_pred HHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHH--ccC
Confidence 3456777788877777999998877655444555544 667899999999876543 332222222222111110 001
Q ss_pred chHHHHhhheeeecCCceeeehhhhhhhhhcCCCCCCCeeEeeccccchhhHHHHHHHHHhc
Q 014518 108 LPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIH 169 (423)
Q Consensus 108 ~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~~RG~vvgilk~~~GLSaaI~s~i~~~~f 169 (423)
.+.+.+.++.++.|.+.+.. ........+.+|++||++.|+.-....+++.+-..+...++
T Consensus 314 ~~~~~~~~~~~~~G~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~ 374 (402)
T TIGR00897 314 HSFAVALIIAIALGIFLAGY-VPLAAVFPTLAPKHKGAAMSVLNLSAGLSAFLAPAIAVLFI 374 (402)
T ss_pred CcHHHHHHHHHHHHHHHHHH-HHHHHHHHhhCcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12333333444444444332 22222223456899999999988888877666554544443
No 94
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=97.04 E-value=9.2e-05 Score=73.09 Aligned_cols=124 Identities=8% Similarity=-0.090 Sum_probs=79.2
Q ss_pred hhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHhhhee
Q 014518 40 PVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIF 118 (423)
Q Consensus 40 ~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~ 118 (423)
+...+.++++.++...+.....++..+ .++.|.+.||+|+|..+.++.+...+++.++...-. . ..+.+....+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~ 303 (377)
T TIGR00890 229 KPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPM--L---NDVLFLATVA 303 (377)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHccc--c---hhHHHHHHHH
Confidence 344456888888877766666666655 677999999999999999998888888766443211 1 1112211122
Q ss_pred eecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHHHHHHHh
Q 014518 119 VGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMI 168 (423)
Q Consensus 119 l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s~i~~~~ 168 (423)
+.+.+.+...+.......+.+| ++||++.|+......+++++-..+....
T Consensus 304 ~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l 354 (377)
T TIGR00890 304 LVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHA 354 (377)
T ss_pred HHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHH
Confidence 2233333333322334456786 5799999999888888877766555444
No 95
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=97.03 E-value=2.5e-05 Score=80.79 Aligned_cols=175 Identities=11% Similarity=0.112 Sum_probs=99.2
Q ss_pred chhHHHHHHHHhhcccccccccchhhhhhccCcch--------hHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHH
Q 014518 16 WLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQ--------KQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVG 86 (423)
Q Consensus 16 w~~l~a~~~i~l~~Gt~Y~Fs~yS~~Lk~~l~~sq--------~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG 86 (423)
|..+++.+.++......| .|.+..-++.++++ ++...+.....++..+ .++.|.+.||+|+|.++.++
T Consensus 211 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~ 287 (418)
T TIGR00889 211 AIFFFFSMLLGAPLQITN---IFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLS 287 (418)
T ss_pred eeHHHHHHHHHhHHHHHH---HhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 344444444444443343 33344334456654 3334444433444433 57899999999999999999
Q ss_pred HhhhhhcceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeec-cccchhhHHHHHH
Q 014518 87 ALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILK-GFAGLGGAILTQV 164 (423)
Q Consensus 87 ~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk-~~~GLSaaI~s~i 164 (423)
.+...+++.++... .... ..++.+.+..++.|.+.+..+.++..-..+++| ++||++.|+.- ...++++++-..+
T Consensus 288 ~~~~~v~~~l~~~~-~~~~--~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l 364 (418)
T TIGR00889 288 LVAWALRFGFFAYG-DPEY--FGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYIL 364 (418)
T ss_pred HHHHHHHHHHHHHc-Ccch--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 99887776554332 1111 123444455556666666556666666788998 57999999996 5566666554444
Q ss_pred HHHhc---CCCc----cceeeeeeechhhhhhhheeeEe
Q 014518 165 YTMIH---APDH----ANLIFMVAVGPAMVVIALMFIIR 196 (423)
Q Consensus 165 ~~~~f---~~~~----~~fllfla~~~~~v~~~~~~fvr 196 (423)
.-..+ +++. +.-+++.++...+.+++..+++|
T Consensus 365 ~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~ 403 (418)
T TIGR00889 365 SGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFK 403 (418)
T ss_pred HHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 33332 2111 12223344445555555666665
No 96
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=96.96 E-value=2.3e-05 Score=65.82 Aligned_cols=102 Identities=20% Similarity=0.249 Sum_probs=76.6
Q ss_pred cccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcC
Q 014518 61 DLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNF 139 (423)
Q Consensus 61 ~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nF 139 (423)
.+|..+ +++.|.+.||+|+|..+.++.+...++..++... .+.|.+.+..++.|.+.+..+........+.+
T Consensus 8 ~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 80 (141)
T TIGR00880 8 ALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALS-------SNITVLIIARFLQGFGAAFALVAGAALIADIY 80 (141)
T ss_pred hhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHh-------ccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHC
Confidence 344433 7789999999999999999998888777654322 24666677777788888777777767778889
Q ss_pred C-CCCCCeeEeeccccchhhHHHHHHHHHhc
Q 014518 140 P-KSRGPVVGILKGFAGLGGAILTQVYTMIH 169 (423)
Q Consensus 140 P-~~RG~vvgilk~~~GLSaaI~s~i~~~~f 169 (423)
| ++||.+.++......+++.+-..+.....
T Consensus 81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 111 (141)
T TIGR00880 81 PPEERGVALGLMSAGIALGPLLGPPLGGVLA 111 (141)
T ss_pred ChhhhhHHHHHHHHhHHHHHHHhHHhHHHHh
Confidence 8 56999999998888888877666555443
No 97
>PRK09952 shikimate transporter; Provisional
Probab=96.95 E-value=0.00023 Score=73.89 Aligned_cols=147 Identities=12% Similarity=0.024 Sum_probs=92.6
Q ss_pred cCcchhHHHHHHHHhhccc-ccccccchhh-hhhcc--CcchhHHHhhhh-----cccccccc-ccccchhhhhhhhHHH
Q 014518 13 NNRWLVFVAAMWIQSCAGI-GYLFGSISPV-IKSSL--NYNQKQIARLGV-----AKDLGDSV-GFLAGSLCEVLPIWGA 82 (423)
Q Consensus 13 ~~Rw~~l~a~~~i~l~~Gt-~Y~Fs~yS~~-Lk~~l--~~sq~~l~~i~~-----a~~vG~~~-g~~~G~l~D~~gP~~v 82 (423)
.+||..+..+......-+- ...++..++. +++.+ +.++. ..++.. ++-++.-+ +++.|.+.||+|+|.+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~ 96 (438)
T PRK09952 18 SRARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRM 96 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHH
Confidence 3445555544444444332 3334445553 45544 66665 344432 22233434 5778999999999999
Q ss_pred HHHHHhhhhhcceeeeeeeeCCCCCc---hHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhh
Q 014518 83 LLVGALQNFIGYGWVWLIVTGRAPVL---PLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGG 158 (423)
Q Consensus 83 l~iG~~~~~~Gy~~~~l~~~g~i~~~---~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSa 158 (423)
++++.+...++..+..++ ...... ..+.+.++-++.|.|.+..+.++.....+++| ++||.+.+......+++.
T Consensus 97 l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~ 174 (438)
T PRK09952 97 LMLTVWMMGIATALIGLL--PSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGL 174 (438)
T ss_pred HHHHHHHHHHHHHHHhcC--CcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHH
Confidence 999998877776554332 111000 02246667778999999988888888889998 578999888887777766
Q ss_pred HHHH
Q 014518 159 AILT 162 (423)
Q Consensus 159 aI~s 162 (423)
.+-.
T Consensus 175 ~l~~ 178 (438)
T PRK09952 175 LLST 178 (438)
T ss_pred HHHH
Confidence 5443
No 98
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=96.93 E-value=5.8e-05 Score=76.91 Aligned_cols=139 Identities=13% Similarity=-0.031 Sum_probs=87.6
Q ss_pred cccccccchhhh-hhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCc
Q 014518 31 IGYLFGSISPVI-KSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVL 108 (423)
Q Consensus 31 t~Y~Fs~yS~~L-k~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~ 108 (423)
..+.|..+.|.+ ++.+|++..+.........++..+ .++.|.+.||++++..+.+|.+...+|..++....... ..
T Consensus 230 ~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~ 307 (406)
T PRK15402 230 PLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVIS--SH 307 (406)
T ss_pred HHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcc--cc
Confidence 344555556654 677899988877654444445544 56789999999999999999887777766544322111 11
Q ss_pred hHHHHhhheeeecCCceeeehhhhhhhhhcCCCCCCCeeEeeccccchhhHHHHHHHHHhcCC
Q 014518 109 PLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIHAP 171 (423)
Q Consensus 109 ~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~~RG~vvgilk~~~GLSaaI~s~i~~~~f~~ 171 (423)
+.+.+.+..++.+.|.+.............-|++||.+.++.-....++.++=+.+....+..
T Consensus 308 ~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~ 370 (406)
T PRK15402 308 AYLWLTAGLSLYAFGIGLANAGLYRLTLFSSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLG 370 (406)
T ss_pred cHHHHHHHHHHHHHHHHHHhhhHHHHHhhhccccccHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 343444555556666665544333333344578999999998776666666555555555444
No 99
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=96.92 E-value=0.00025 Score=70.45 Aligned_cols=121 Identities=10% Similarity=0.004 Sum_probs=76.9
Q ss_pred hhcccccccccchhhh-hhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhh-hcceeeeeeeeC
Q 014518 27 SCAGIGYLFGSISPVI-KSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNF-IGYGWVWLIVTG 103 (423)
Q Consensus 27 l~~Gt~Y~Fs~yS~~L-k~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~-~Gy~~~~l~~~g 103 (423)
++....|.+..|.|.. ++.+|+++.+...+.....++..+ .++.|.+.||+|+|.++.+++.... +++..+. .+.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~-~~~~ 308 (394)
T TIGR00883 230 ATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLM-ALLD 308 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHH-HHhc
Confidence 3344455666666665 478899999988866666666655 5679999999999988776554433 3322211 1111
Q ss_pred CCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCCC-CCCCeeEeec
Q 014518 104 RAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILK 151 (423)
Q Consensus 104 ~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~-~RG~vvgilk 151 (423)
. .+.+.+....++.+.+.+..+........+.+|+ +||++.|+.-
T Consensus 309 ~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 354 (394)
T TIGR00883 309 S---GSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAY 354 (394)
T ss_pred C---CchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehh
Confidence 1 1344444445555566656666666667788985 6999998853
No 100
>TIGR00901 2A0125 AmpG-related permease.
Probab=96.91 E-value=5.7e-05 Score=75.35 Aligned_cols=123 Identities=13% Similarity=-0.087 Sum_probs=83.3
Q ss_pred hhhhhhccCcchhHHHhhhhccccccccccccchhhhhh-----hhHHHH-HHHHhhhhhcceeeeeeeeCCCCCchHHH
Q 014518 39 SPVIKSSLNYNQKQIARLGVAKDLGDSVGFLAGSLCEVL-----PIWGAL-LVGALQNFIGYGWVWLIVTGRAPVLPLWA 112 (423)
Q Consensus 39 S~~Lk~~l~~sq~~l~~i~~a~~vG~~~g~~~G~l~D~~-----gP~~vl-~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~ 112 (423)
-|.+.+++|+|.+|+..+++..-.. .++++.|.+.||+ |+|..+ +++.+...+....+. +... ..++|.
T Consensus 11 ~~~~~~~~g~s~~~~g~~~~~~~~~-~~~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~--~~~~--~~~l~~ 85 (356)
T TIGR00901 11 LPYWLRSKNVSLKTIGFFSLVGLPY-SLKFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILS--FLVP--STDLPL 85 (356)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHH-HHHHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHH--cCCc--chhHHH
Confidence 4667778899999999987654333 3488999999998 666654 455544444332322 2111 124556
Q ss_pred HhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHHHHHH
Q 014518 113 MCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYT 166 (423)
Q Consensus 113 l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s~i~~ 166 (423)
+....++.+.+.+..+.+.-.-..+.+| ++||.+.|+.-....++..+-..+..
T Consensus 86 l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~ 140 (356)
T TIGR00901 86 LAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLAL 140 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHH
Confidence 6666666667777777777777889996 78999999988888877666555543
No 101
>PRK09528 lacY galactoside permease; Reviewed
Probab=96.90 E-value=8.2e-05 Score=76.33 Aligned_cols=157 Identities=10% Similarity=0.033 Sum_probs=86.7
Q ss_pred cccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHH
Q 014518 35 FGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAM 113 (423)
Q Consensus 35 Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l 113 (423)
+..|..+..+..+.+.++...+.....++..+ .++.|.+.||+|+|..+.++.++..+++.++.++ + +.|.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~-----~--~~~~~ 318 (420)
T PRK09528 246 FPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFA-----T--GPLEV 318 (420)
T ss_pred HHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhc-----c--cHHHH
Confidence 55555554444467777777765555555544 6789999999999999999888877776665431 2 23344
Q ss_pred hhheeeecCCceeeehhhhhhhhhcCCC-CCCCeeEee-ccccchhhHHHHHHHHHhcCC-Cccceeeeeeechhhhhhh
Q 014518 114 CILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGIL-KGFAGLGGAILTQVYTMIHAP-DHANLIFMVAVGPAMVVIA 190 (423)
Q Consensus 114 ~~f~~l~g~g~~~~~ta~l~t~~~nFP~-~RG~vvgil-k~~~GLSaaI~s~i~~~~f~~-~~~~fllfla~~~~~v~~~ 190 (423)
.....+.+.+.+........-..+.+|+ .|+++.+.. -...++|+.+-..+.-...+. ....-++.++....+..++
T Consensus 319 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~ 398 (420)
T PRK09528 319 SILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLI 398 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHH
Confidence 4444455554444433333444567875 467665542 223445554444333222221 2233334444444444445
Q ss_pred heeeEecc
Q 014518 191 LMFIIRPV 198 (423)
Q Consensus 191 ~~~fvr~~ 198 (423)
...+.|.+
T Consensus 399 ~~~~~~~~ 406 (420)
T PRK09528 399 SVFTLSGD 406 (420)
T ss_pred HHHHhcCC
Confidence 55555543
No 102
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=96.90 E-value=7.4e-05 Score=77.57 Aligned_cols=131 Identities=16% Similarity=0.136 Sum_probs=84.8
Q ss_pred ccchhhhhhccCcchhHHHhhhhcccccc-ccccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHh
Q 014518 36 GSISPVIKSSLNYNQKQIARLGVAKDLGD-SVGFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMC 114 (423)
Q Consensus 36 s~yS~~Lk~~l~~sq~~l~~i~~a~~vG~-~~g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~ 114 (423)
..|.|.+.+..|+++.+.........++. ...+++|.+.||+|+|.++++|.+...+++..++......... ....++
T Consensus 291 ~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~-~~~~~~ 369 (479)
T PRK10077 291 LYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPG-IVALLS 369 (479)
T ss_pred HHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCccc-HHHHHH
Confidence 45778888888988765554443333333 3367899999999999999999999888887765443322211 111222
Q ss_pred hheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHHHHHHHh
Q 014518 115 ILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMI 168 (423)
Q Consensus 115 ~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s~i~~~~ 168 (423)
+.....+++..+ .........+.|| ++||++.|+.-+...+++.+.+.++-..
T Consensus 370 ~~~~~~~~~~~~-~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~ 423 (479)
T PRK10077 370 MLFYVAAFAMSW-GPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMM 423 (479)
T ss_pred HHHHHHHHhccc-cchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 222222233222 1234455677898 5799999999998888888877776543
No 103
>PRK03893 putative sialic acid transporter; Provisional
Probab=96.89 E-value=0.00035 Score=72.99 Aligned_cols=122 Identities=21% Similarity=0.290 Sum_probs=76.6
Q ss_pred chhh-hhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHhh
Q 014518 38 ISPV-IKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCI 115 (423)
Q Consensus 38 yS~~-Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~ 115 (423)
+-|. +++.+|++..+...+.....+|..+ .+++|.+.||+|+|.++.++.+...++..++... . ..+.|.+..
T Consensus 297 ~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~ 371 (496)
T PRK03893 297 LLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAI--G---GANVWVLGL 371 (496)
T ss_pred HHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhc--c---ccHHHHHHH
Confidence 4444 4568999999999987777777755 6789999999999998888876655554432221 1 112333322
Q ss_pred heee-ecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHHHHH
Q 014518 116 LIFV-GNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVY 165 (423)
Q Consensus 116 f~~l-~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s~i~ 165 (423)
..++ +..+.+. .........+.+| ++||++.|+.-+...+++.+-..+.
T Consensus 372 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~ 422 (496)
T PRK03893 372 LLFFQQMLGQGI-SGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILG 422 (496)
T ss_pred HHHHHHHHhccc-chhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHH
Confidence 2222 1112221 2223334557788 5799999998888888766554443
No 104
>TIGR00901 2A0125 AmpG-related permease.
Probab=96.88 E-value=0.00011 Score=73.31 Aligned_cols=116 Identities=15% Similarity=0.164 Sum_probs=78.0
Q ss_pred chhhhhhccCcchhHHHhhh-hcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeee-eeCC---CCCchHH
Q 014518 38 ISPVIKSSLNYNQKQIARLG-VAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLI-VTGR---APVLPLW 111 (423)
Q Consensus 38 yS~~Lk~~l~~sq~~l~~i~-~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~-~~g~---i~~~~~~ 111 (423)
+.+-+++ +|++.++...+. ..+.++..+ .+++|.+.||+|+|..+.+++++..+++..+... .... +..+..|
T Consensus 232 ~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (356)
T TIGR00901 232 TTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLL 310 (356)
T ss_pred HHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHH
Confidence 4444555 899999987644 444444444 5678999999999999998888877766543221 1110 1112456
Q ss_pred HHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeecccc
Q 014518 112 AMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFA 154 (423)
Q Consensus 112 ~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~ 154 (423)
.++...++.+.+.+..+.+...-..+.+| ++||++.|+..+..
T Consensus 311 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~ 354 (356)
T TIGR00901 311 MLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLS 354 (356)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHH
Confidence 66666666777778888888888888997 56898877665443
No 105
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=96.88 E-value=7.3e-05 Score=75.86 Aligned_cols=143 Identities=14% Similarity=0.036 Sum_probs=96.9
Q ss_pred chhHHHHHHHHhhcccccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcc
Q 014518 16 WLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGY 94 (423)
Q Consensus 16 w~~l~a~~~i~l~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy 94 (423)
|..+++..+.+.+.+..|. |.+..-+++|++.++...+-..+.++..+ ++++|.+.||+|+|..+.+|.+...+++
T Consensus 208 ~~~l~~~~l~~~~~~~~~~---~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~ 284 (382)
T TIGR00902 208 LRFLAAVCLIQGAHAAYYG---FSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRW 284 (382)
T ss_pred HHHHHHHHHHHHHHHHHHH---HHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHH
Confidence 4555555555555444444 44444445899999998865556666644 7789999999999999999999998888
Q ss_pred eeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeec-cccchhhHHHHHHHHHhc
Q 014518 95 GWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILK-GFAGLGGAILTQVYTMIH 169 (423)
Q Consensus 95 ~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk-~~~GLSaaI~s~i~~~~f 169 (423)
..+. .. ++.|.+.....+-|.+-+....+++.-.-++ | ++|++..|+.- ...|+|..+-+.+.-..+
T Consensus 285 ~~~~-----~~--~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~ 353 (382)
T TIGR00902 285 AIIG-----AI--EAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIY 353 (382)
T ss_pred HHHH-----hH--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7641 12 2456666667777776777666665555555 6 57888888864 356777776665544443
No 106
>PRK15075 citrate-proton symporter; Provisional
Probab=96.85 E-value=9e-05 Score=76.59 Aligned_cols=119 Identities=14% Similarity=0.134 Sum_probs=67.4
Q ss_pred ccccccccchhhh-hhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhh-hcceeeeeeeeCCCC
Q 014518 30 GIGYLFGSISPVI-KSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNF-IGYGWVWLIVTGRAP 106 (423)
Q Consensus 30 Gt~Y~Fs~yS~~L-k~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~-~Gy~~~~l~~~g~i~ 106 (423)
...|....|.|.. ++.+|+++.+...+.....++..+ .+.+|.+.||+|+|.++.++.+... .++..+...... +
T Consensus 252 ~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~--~ 329 (434)
T PRK15075 252 VSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAA--P 329 (434)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcC--C
Confidence 3455566777774 556899998877776666666544 5679999999999998888765432 233211111111 1
Q ss_pred CchHHHHhhheeeecCCceeeehhhhhhhhhcCCC-CCCCeeEeecc
Q 014518 107 VLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKG 152 (423)
Q Consensus 107 ~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~-~RG~vvgilk~ 152 (423)
+++.+.+...+.+.+.+...........+.+|. .||++.|+.-+
T Consensus 330 --~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~ 374 (434)
T PRK15075 330 --SFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYS 374 (434)
T ss_pred --chHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHH
Confidence 221111111111222222333333445677875 69999887543
No 107
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=96.83 E-value=8.4e-05 Score=74.05 Aligned_cols=118 Identities=17% Similarity=0.130 Sum_probs=73.7
Q ss_pred hhhhhccCcchhHHHhhhhccccccc-cccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHhhhee
Q 014518 40 PVIKSSLNYNQKQIARLGVAKDLGDS-VGFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIF 118 (423)
Q Consensus 40 ~~Lk~~l~~sq~~l~~i~~a~~vG~~-~g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~ 118 (423)
.-+++.+|++..+...+.....+... ..++.|.+.||+|+|.++.++.+...+++..+.. . ++.|.+.....
T Consensus 224 ~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~~~~~~~ 296 (375)
T TIGR00899 224 LLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAA--D-----NSLWALLMLQL 296 (375)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHH--H-----HHHHHHHHHHH
Confidence 34567789999888765433222222 2567899999999999888887765555543221 1 13444444444
Q ss_pred eecCCceeeehhhhhhhhhcCCCCCCCeeEeeccccchhhHHHHHH
Q 014518 119 VGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQV 164 (423)
Q Consensus 119 l~g~g~~~~~ta~l~t~~~nFP~~RG~vvgilk~~~GLSaaI~s~i 164 (423)
+.+.+.+...........+.+|++||.+.|+.-....+++++-..+
T Consensus 297 ~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 342 (375)
T TIGR00899 297 LNAIFIGILAGIGMLYFQDLMPGRAGAATTLYTNTGRVGWIIAGSV 342 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHH
Confidence 4455555444444455567789999999998776666555544433
No 108
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=96.81 E-value=3.1e-05 Score=80.88 Aligned_cols=123 Identities=20% Similarity=0.108 Sum_probs=71.6
Q ss_pred cccccccchh-hhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCc
Q 014518 31 IGYLFGSISP-VIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVL 108 (423)
Q Consensus 31 t~Y~Fs~yS~-~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~ 108 (423)
..+.+..|.| -+++.+|+|..+.+.+.....++..+ .+.+|.+.||+|+|....++.....++..++ .+.. .+
T Consensus 273 ~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~--~~~~-~~-- 347 (467)
T PRK09556 273 VRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLG--VYQH-AT-- 347 (467)
T ss_pred HHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHH--HHHh-cC--
Confidence 3455667777 47788999999998877777777766 6689999999998876655443333332111 1111 11
Q ss_pred hHHHHhhheeeecCCceeeehhhhhhhhhcCCC-CCCCeeEeeccccchhh
Q 014518 109 PLWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGG 158 (423)
Q Consensus 109 ~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~-~RG~vvgilk~~~GLSa 158 (423)
+.+.+.+..++.|...............+.+|. +||++.|+..+.-.+.+
T Consensus 348 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g 398 (467)
T PRK09556 348 SEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFG 398 (467)
T ss_pred cHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHh
Confidence 222222222223322211111111334488885 69999999876655533
No 109
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=96.79 E-value=0.00033 Score=71.22 Aligned_cols=146 Identities=9% Similarity=-0.033 Sum_probs=84.1
Q ss_pred chhHHHHHHHHhhcccccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcc
Q 014518 16 WLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGY 94 (423)
Q Consensus 16 w~~l~a~~~i~l~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy 94 (423)
|+......++..+.+... ...+..+++++|+|.+|...+.....++..+ .++.|.+.||+|+|.+++++.+...+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~ 82 (396)
T TIGR00882 5 WMFGLFFFLYFFIMSAYF--PFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLF 82 (396)
T ss_pred HHHHHHHHHHHHHHHHHH--HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 555555555555444332 2455567888999999999977777777755 7899999999999999887766555444
Q ss_pred eeee-eeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCCCCCCCeeEeeccccchhhHHHHHH
Q 014518 95 GWVW-LIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQV 164 (423)
Q Consensus 95 ~~~~-l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~~RG~vvgilk~~~GLSaaI~s~i 164 (423)
.... +.+.........+..++..++.+.+.+.... +..+.+.+.+++++...|.......++.++-..+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~ 152 (396)
T TIGR00882 83 APFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAG-AIEAYIEKVSRNSNFEYGKARMFGCVGWALCASI 152 (396)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchh-hHHHHHHHhhhhcccccchhhhhcccHHHHHHHH
Confidence 3221 1111111010122223223333333333222 2233334444566667777777777777665555
No 110
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=96.79 E-value=7.6e-05 Score=74.79 Aligned_cols=125 Identities=15% Similarity=0.182 Sum_probs=71.9
Q ss_pred ccccccchh-hhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhh-cceeeeeeeeCCCCCc
Q 014518 32 GYLFGSISP-VIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFI-GYGWVWLIVTGRAPVL 108 (423)
Q Consensus 32 ~Y~Fs~yS~-~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~-Gy~~~~l~~~g~i~~~ 108 (423)
.+.+..+.| .+++.+|+++++...+.....++..+ +++.|.+.||+|+|.++.++.+...+ |..++.. +..+ .
T Consensus 210 ~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~---~~~~-~ 285 (377)
T PRK11102 210 MFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVS---ALLD-L 285 (377)
T ss_pred HHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHH---HHHh-h
Confidence 444444444 45677899999988866665566544 77899999999999988888765332 2222111 1111 1
Q ss_pred hHHHHhhheeeecCCceeeehhhhhhhhhcCCCCCCCeeEeeccc-cchhhHH
Q 014518 109 PLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGF-AGLGGAI 160 (423)
Q Consensus 109 ~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~~RG~vvgilk~~-~GLSaaI 160 (423)
+.|.+.+...+.+.+.+.....++....+.+|++||.+.++.... +|+++.+
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~ 338 (377)
T PRK11102 286 GFWALVVGVAAFVGCVSMISSNAMAVILDEFPHMAGTASSLAGTLRFGIGAIV 338 (377)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHhccccccchHHHHHHHHHHHHHHHHH
Confidence 233322222222222223333334444566899999999886543 4554443
No 111
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=96.72 E-value=0.00011 Score=74.67 Aligned_cols=149 Identities=13% Similarity=0.091 Sum_probs=87.5
Q ss_pred chhHHHHHHHHhhcccccccccchhhhhhccCcchhHHHhhhhc-ccccccc-ccccchhhhhhhhHHHHHHHHhhhhhc
Q 014518 16 WLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVA-KDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIG 93 (423)
Q Consensus 16 w~~l~a~~~i~l~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a-~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~G 93 (423)
|..++.....+...+..|.| .++-+++ .|++.+++..+... +.++..+ .++.|++.||+|+|.++.++.+....+
T Consensus 211 ~~~~~~~~l~~~~~~~~~~~--~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~ 287 (390)
T TIGR02718 211 WSLLALALLSAMTAVSGFGL--SKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSL 287 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHH--hhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 45555555666666667765 4566766 69999999886443 3345555 468999999999999988877654232
Q ss_pred ceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCC--CCCCCeeEeeccccchhhHHHHHHHHHh
Q 014518 94 YGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP--KSRGPVVGILKGFAGLGGAILTQVYTMI 168 (423)
Q Consensus 94 y~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP--~~RG~vvgilk~~~GLSaaI~s~i~~~~ 168 (423)
.. .+.........++.+.+.....+.+.+.+....+.....++..+ ++||++.++..+..++++.+-..+.-..
T Consensus 288 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l 363 (390)
T TIGR02718 288 AL-LWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYL 363 (390)
T ss_pred HH-HHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 22222211111122222222223333333333333334455553 5789999999999888877666554433
No 112
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=96.65 E-value=0.00025 Score=74.85 Aligned_cols=137 Identities=15% Similarity=0.072 Sum_probs=80.5
Q ss_pred ccccccccchhhhhhccCcchhHHH----------hh--hhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhccee
Q 014518 30 GIGYLFGSISPVIKSSLNYNQKQIA----------RL--GVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGW 96 (423)
Q Consensus 30 Gt~Y~Fs~yS~~Lk~~l~~sq~~l~----------~i--~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~ 96 (423)
-..|....|.|.+-+..|++..+.+ .+ .....++... .+..|.+.||+|+|.+++++.+...++...
T Consensus 302 ~~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~ 381 (502)
T TIGR00887 302 IAFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFV 381 (502)
T ss_pred HHHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHH
Confidence 3557777888887778888754211 11 2222334333 356899999999999998888776655444
Q ss_pred eeeeeeCCCCCch-HHHHhhheeeecCCceeeehhhhhhhhhcCCC-CCCCeeEeeccccchhhHHHHHHHHHhcC
Q 014518 97 VWLIVTGRAPVLP-LWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (423)
Q Consensus 97 ~~l~~~g~i~~~~-~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~-~RG~vvgilk~~~GLSaaI~s~i~~~~f~ 170 (423)
+...+.. .+... +..++++.+..+.| +... ...-...-||. .||++.|+.-...-+++++...++-...+
T Consensus 382 l~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~ 453 (502)
T TIGR00887 382 LGFAYNH-LSTHGFLAIYVLAQFFANFG--PNAT-TFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQ 453 (502)
T ss_pred HHHHHHh-cchhHHHHHHHHHHHHHhcC--CCch-hhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhc
Confidence 3332211 11111 11222222222222 1111 11223688995 59999999999988988888777766655
No 113
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=96.64 E-value=0.00023 Score=70.00 Aligned_cols=121 Identities=15% Similarity=0.053 Sum_probs=86.0
Q ss_pred chhhh-hhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHhh
Q 014518 38 ISPVI-KSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCI 115 (423)
Q Consensus 38 yS~~L-k~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~ 115 (423)
+.|.+ ++.+|++..+...+.....++..+ .++.|++.||.+++..+.++.+...++..++... . . +.|.+.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~-~~~~~~~ 306 (365)
T TIGR00900 233 LFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLT--P---P-NFPLFLV 306 (365)
T ss_pred HhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhh--c---h-hHHHHHH
Confidence 33444 445899999998877777777755 6789999999999998888766655555443322 1 1 2555556
Q ss_pred heeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHHHH
Q 014518 116 LIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQV 164 (423)
Q Consensus 116 f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s~i 164 (423)
..++.|.+.+..+........+.+| ++||++.|+......+++++-..+
T Consensus 307 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~ 356 (365)
T TIGR00900 307 LWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLIL 356 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6667777777777777777888998 569999999888777766655443
No 114
>PRK11010 ampG muropeptide transporter; Validated
Probab=96.64 E-value=0.00013 Score=77.13 Aligned_cols=175 Identities=14% Similarity=0.254 Sum_probs=93.4
Q ss_pred chhHHHHHHHHhhcccccccccchhhhhhccCcchhHHHhhh-hcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhc
Q 014518 16 WLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLG-VAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIG 93 (423)
Q Consensus 16 w~~l~a~~~i~l~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~i~-~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~G 93 (423)
|..++...+.+...... ++...+-+.+.+|+|.++...+. +.+.++..+ ++.+|.+.||+|+|..+.++++...++
T Consensus 225 ~~~ll~~~l~~~~~~~~--~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~ 302 (491)
T PRK11010 225 WLILLLIVLYKLGDAFA--MSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVS 302 (491)
T ss_pred HHHHHHHHHHHHHHHHH--HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 55555544444333322 33345566778999999999874 555566655 667999999999988777776654443
Q ss_pred ceeee-eeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCCC-CCCCeeEeeccccchhhHHHHHHHHHhcCC
Q 014518 94 YGWVW-LIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAILTQVYTMIHAP 171 (423)
Q Consensus 94 y~~~~-l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~-~RG~vvgilk~~~GLSaaI~s~i~~~~f~~ 171 (423)
...++ +...+ ++.+.+....++.+...++...+.....+...|+ .+|+..|+.-+..++++.+...+.-...+.
T Consensus 303 ~l~~~~l~~~~----~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~ 378 (491)
T PRK11010 303 NAGYWLLSITD----KNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEA 378 (491)
T ss_pred HHHHHHHHhcc----ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33322 22222 1333332222221111122223333333344453 478888888888888777665443222221
Q ss_pred -CccceeeeeeechhhhhhhheeeEec
Q 014518 172 -DHANLIFMVAVGPAMVVIALMFIIRP 197 (423)
Q Consensus 172 -~~~~fllfla~~~~~v~~~~~~fvr~ 197 (423)
.... .+.+.....+++++...++|.
T Consensus 379 ~G~~~-~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 379 HGWPT-FYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred hChHH-HHHHHHHHHHHHHHHHHHHHh
Confidence 1222 223333344555555555564
No 115
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=96.57 E-value=0.00045 Score=68.68 Aligned_cols=121 Identities=20% Similarity=0.201 Sum_probs=72.5
Q ss_pred ccccccc-hhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCch
Q 014518 32 GYLFGSI-SPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLP 109 (423)
Q Consensus 32 ~Y~Fs~y-S~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~ 109 (423)
.|.+..+ ..-+++.+|+++.+...+.....++..+ .++.|.+.||+|+|....++.++...+..++........ ...
T Consensus 241 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 319 (366)
T TIGR00886 241 FLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPL-SLA 319 (366)
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcc-hHH
Confidence 3444333 3455678899999988766555554444 668999999999988888887777777766554443211 111
Q ss_pred --HHHHhhheeeecCCceeeehhhhhhhhhcCCCCCCCeeEeeccccchh
Q 014518 110 --LWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLG 157 (423)
Q Consensus 110 --~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~~RG~vvgilk~~~GLS 157 (423)
++.+.++.+..|.+.+.. ......-+|++||++.|+..+...++
T Consensus 320 ~~~~~~~~~~~~~g~~~~~~----~~~~~~~~~~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 320 VFIVLFVALFFFSGAGNGST----FALVPHIFRRATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHHHHHHHhccccchh----hhcchhhchhhcccHHHHHHHhccCC
Confidence 112222333333333322 22223446899999999877655443
No 116
>PRK11043 putative transporter; Provisional
Probab=96.56 E-value=0.00033 Score=71.11 Aligned_cols=135 Identities=13% Similarity=0.092 Sum_probs=81.3
Q ss_pred hcccccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCC
Q 014518 28 CAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAP 106 (423)
Q Consensus 28 ~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~ 106 (423)
+.+..+.|..+.|.+.+.+|++.++...+.....++..+ ++..+.+.||++++....++.+...++...+++.... .
T Consensus 215 ~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 292 (401)
T PRK11043 215 CSAAFFAWLTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLL--S 292 (401)
T ss_pred HHHHHHHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHh--c
Confidence 344455666677777777899999988755444445444 5667899999998876655555444443333222111 1
Q ss_pred CchHHHHhhheeeecCCceeeehhhhhhhhhcCCCCCCCeeEeeccccchhhHHHHHH
Q 014518 107 VLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQV 164 (423)
Q Consensus 107 ~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~~RG~vvgilk~~~GLSaaI~s~i 164 (423)
.+..+.+.+...+.+.+.+..+.......++.+|++||.+.|+.-+.....+.+...+
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~ 350 (401)
T PRK11043 293 HPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFPQATGKAAALQNTLQLGLCFLASLL 350 (401)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCcccChHHHHHHHHHHHHHHHHHHHH
Confidence 1123333333334455555555555556678889999999999876544444444333
No 117
>PRK10504 putative transporter; Provisional
Probab=96.53 E-value=0.00026 Score=73.62 Aligned_cols=147 Identities=10% Similarity=0.071 Sum_probs=88.9
Q ss_pred CcchhHHHHHHHHhhcccccccccchhh-hhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhh
Q 014518 14 NRWLVFVAAMWIQSCAGIGYLFGSISPV-IKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNF 91 (423)
Q Consensus 14 ~Rw~~l~a~~~i~l~~Gt~Y~Fs~yS~~-Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~ 91 (423)
++|..+..+.++..++.. .+..+.|. ++..+|++..+...+.....++..+ .++.|.+.||+|+|.++.+|.+...
T Consensus 261 ~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~ 338 (471)
T PRK10504 261 RTFSLGLAGSFAGRIGSG--MLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLA 338 (471)
T ss_pred cchHHHHHHHHHHHHHHH--HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHH
Confidence 445555554444333221 22333443 3446899998888877666666655 4789999999999999999988777
Q ss_pred hcceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeecccc----chhhHHHHHHHH
Q 014518 92 IGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFA----GLGGAILTQVYT 166 (423)
Q Consensus 92 ~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~----GLSaaI~s~i~~ 166 (423)
++..++...... . +.+.+.+..++.|.|.+..+........+.+| ++||.+.|+..... +++.++.+.+..
T Consensus 339 ~~~~~~~~~~~~---~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~ 414 (471)
T PRK10504 339 LVSLLFMLVALL---G-WYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLG 414 (471)
T ss_pred HHHHHHHhcccc---c-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 765554432111 1 23333333334445555555555566667887 56999999865544 455555554443
No 118
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=96.46 E-value=0.00081 Score=67.37 Aligned_cols=125 Identities=18% Similarity=0.203 Sum_probs=74.8
Q ss_pred cchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhh-cceeeeeeeeCCCCCchHHHHh
Q 014518 37 SISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFI-GYGWVWLIVTGRAPVLPLWAMC 114 (423)
Q Consensus 37 ~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~-Gy~~~~l~~~g~i~~~~~~~l~ 114 (423)
.+.+-+++++|++..+...+.....++..+ .++.|.+.||+|.|..+.++.+...+ .+.++. . . . +.|.+.
T Consensus 260 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~--~-~---~-~~~~~~ 332 (405)
T TIGR00891 260 LLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFA--I-G---A-NVAVLG 332 (405)
T ss_pred hhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHH--h-C---C-chHHHH
Confidence 345567778999999998877666677655 67899999999999988887765422 222111 1 1 1 233322
Q ss_pred hheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHHHHHHHh
Q 014518 115 ILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMI 168 (423)
Q Consensus 115 ~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s~i~~~~ 168 (423)
+..++.+...............+.+| ++||++.|+......+++.+-..+....
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l 387 (405)
T TIGR00891 333 LGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALL 387 (405)
T ss_pred HHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 22122111111111222233457787 5799999998877777666655544433
No 119
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=96.44 E-value=0.00014 Score=75.56 Aligned_cols=132 Identities=17% Similarity=0.113 Sum_probs=70.3
Q ss_pred cccccccchhh-hhhccCcchhHHHhhhhcccccccc-ccccchhhhhh--hhHHH-HHHHHhhhhhcceeeeeeeeCCC
Q 014518 31 IGYLFGSISPV-IKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVL--PIWGA-LLVGALQNFIGYGWVWLIVTGRA 105 (423)
Q Consensus 31 t~Y~Fs~yS~~-Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~--gP~~v-l~iG~~~~~~Gy~~~~l~~~g~i 105 (423)
..|.+..|-|. +++..|++..+.+.+.....++..+ .++.|.+.||+ ++|.. ..+...+..++..++++...+
T Consensus 268 ~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~-- 345 (452)
T PRK11273 268 LRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAG-- 345 (452)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhccc--
Confidence 33455555555 6667899999888766666666654 67899999998 55432 222233333444443332211
Q ss_pred CCchHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHHHHHHH
Q 014518 106 PVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTM 167 (423)
Q Consensus 106 ~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s~i~~~ 167 (423)
. ....++. .++.|.+........-.-..+.+| +.||++.|+......+++++.+....+
T Consensus 346 -~-~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g 405 (452)
T PRK11273 346 -N-PTVDMAC-MIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVG 405 (452)
T ss_pred -C-hHHHHHH-HHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHH
Confidence 1 1111111 111111111000011112357888 579999999987766776665444333
No 120
>PRK11010 ampG muropeptide transporter; Validated
Probab=96.44 E-value=0.00015 Score=76.76 Aligned_cols=154 Identities=13% Similarity=0.022 Sum_probs=93.1
Q ss_pred hHhhhhcCcchhHHHHHHHHhhcccccc-cccchhhhhhccCcchhHHHhhhhccccccccccccchhhhhh-----hhH
Q 014518 7 RFVSFFNNRWLVFVAAMWIQSCAGIGYL-FGSISPVIKSSLNYNQKQIARLGVAKDLGDSVGFLAGSLCEVL-----PIW 80 (423)
Q Consensus 7 ~~~~~~~~Rw~~l~a~~~i~l~~Gt~Y~-Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~g~~~G~l~D~~-----gP~ 80 (423)
..+....+|+..+ ..+...+|..+. .+---|..-+..|.|.+|+..++..+-. -.+.++.|.+.||+ |+|
T Consensus 5 ~l~~~~~~~~~~~---~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~~~~~~~-~~~~~l~gpl~Dr~~~~~~Grr 80 (491)
T PRK11010 5 YLRIFQQPNSAIL---LILGFASGLPLALTSGTLQAWMTVENIDLKTIGFFSLVGQA-YVFKFLWSPLMDRYTPPFLGRR 80 (491)
T ss_pred HHHHHcccHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHcccccCCCCc
Confidence 3344445554443 333344444332 1122233333457777777775432222 13578899999999 877
Q ss_pred HH-HHHHHhhhhhcceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhh
Q 014518 81 GA-LLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGG 158 (423)
Q Consensus 81 ~v-l~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSa 158 (423)
.. ++++.+...++..++.. .. +..++|.+.+..++.+.+.+..+.+.-....++|| ++||.+.|+......++.
T Consensus 81 r~~ll~~~i~~~~~~~~~a~--~~--~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~ 156 (491)
T PRK11010 81 RGWLLATQLLLLVAIAAMGF--LE--PGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAM 156 (491)
T ss_pred hHHHHHHHHHHHHHHHHHHH--cC--CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHH
Confidence 65 55666555455444322 11 12246666666667777888888888888889997 789999999988777776
Q ss_pred HHHHHHHHHh
Q 014518 159 AILTQVYTMI 168 (423)
Q Consensus 159 aI~s~i~~~~ 168 (423)
.+-..+...+
T Consensus 157 llg~~l~~~l 166 (491)
T PRK11010 157 LVSGGLALWL 166 (491)
T ss_pred HHHHHHHHHH
Confidence 6555444333
No 121
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=96.40 E-value=0.00025 Score=71.84 Aligned_cols=132 Identities=12% Similarity=0.115 Sum_probs=86.8
Q ss_pred hhhcCc--chhHHHHHHHHhhcccccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHH
Q 014518 10 SFFNNR--WLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVG 86 (423)
Q Consensus 10 ~~~~~R--w~~l~a~~~i~l~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG 86 (423)
+..++| |..+++..+.+.+.+..|. |.+..-+++|+++.+..++-....++..+ +++.|.+.||+|+|.++.++
T Consensus 200 ~i~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~ 276 (382)
T PRK11128 200 ALLKEPTVWRFLLCVSLLQGSHAAYYG---FSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLS 276 (382)
T ss_pred HHHcChhHHHHHHHHHHHHHHhHhHHH---HHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
Confidence 344444 4445555555555444433 33444355899999988866666665544 67899999999999999999
Q ss_pred HhhhhhcceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCCCCCCCeeEeec
Q 014518 87 ALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILK 151 (423)
Q Consensus 87 ~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~~RG~vvgilk 151 (423)
.+...+++.++.. .+ +.|.+.+..++.|.+.+..+.+.....-+.-|+++|++.++.-
T Consensus 277 ~~~~~~~~~~~~~-----~~--~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (382)
T PRK11128 277 AICGVVRWGLMGS-----TT--ALPWLIVIQILHCGTFTVCHLAAMRYIAARPGSEVIRLQALYS 334 (382)
T ss_pred HHHHHHHHHHHHh-----hh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHhhhHHHHHHHH
Confidence 9887777765321 22 3555555666667777766666666555665678888887654
No 122
>PRK03699 putative transporter; Provisional
Probab=96.40 E-value=0.00016 Score=73.53 Aligned_cols=128 Identities=12% Similarity=-0.044 Sum_probs=79.6
Q ss_pred cccccccchhhhh-hccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCc
Q 014518 31 IGYLFGSISPVIK-SSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVL 108 (423)
Q Consensus 31 t~Y~Fs~yS~~Lk-~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~ 108 (423)
..|.+..|.|.+- +++|+|.++...+.....++..+ .+..|.+.||+++|.++.++.....+++.++. +.+ +
T Consensus 220 ~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~~~---~- 293 (394)
T PRK03699 220 AQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFV--NTD---D- 293 (394)
T ss_pred HHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHH--HcC---C-
Confidence 3456667777654 78899999988765444455444 56789999999999988887776666554432 111 2
Q ss_pred hHHHHhhheeeecCCceeeehhhhhhhhhcCCCCCCCeeEeeccccchhhHHHHHHH
Q 014518 109 PLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVY 165 (423)
Q Consensus 109 ~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~~RG~vvgilk~~~GLSaaI~s~i~ 165 (423)
.+.+.+..++.|.+.+..+........+..|++++.+.|.......+++.+-..+.
T Consensus 294 -~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~p~~~ 349 (394)
T PRK03699 294 -PSHLLYAILGLGFFSSAIYTTIITLGSQQTKVASPKLVNFILTCGTIGTMLTFVVT 349 (394)
T ss_pred -chHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHhhhHHHHHHHHHH
Confidence 11222233344444444444444444455688888888887777777665554443
No 123
>PRK15011 sugar efflux transporter B; Provisional
Probab=96.39 E-value=0.00032 Score=71.47 Aligned_cols=129 Identities=9% Similarity=0.049 Sum_probs=74.3
Q ss_pred HhhhhcCcchhHHHHHHHHhhcccccccccchhhhhhccCcchhHHHhhh-hccccccccccccchhhhhhhhHHHHHH-
Q 014518 8 FVSFFNNRWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLG-VAKDLGDSVGFLAGSLCEVLPIWGALLV- 85 (423)
Q Consensus 8 ~~~~~~~Rw~~l~a~~~i~l~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~i~-~a~~vG~~~g~~~G~l~D~~gP~~vl~i- 85 (423)
.++...+-|..++.-.+..+..+. .....+..+++++|+|.++...+. ....++..++.+.|...||+|+|..+++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~dr~g~r~~~~~~ 87 (393)
T PRK15011 10 AKSFDLTSTAFLIVAFLTGIAGAL--QTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIVF 87 (393)
T ss_pred chhccchhHHHHHHHHHHHHHHHH--HHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHH
Confidence 445545556655554444444343 335566678999999999999974 4445566666665555999999876544
Q ss_pred HHhhhhhcceeeeeeeeCCCCCchHHHHhhhe-eeecCCceeeehhhhhhhhhcCCCCCCCee
Q 014518 86 GALQNFIGYGWVWLIVTGRAPVLPLWAMCILI-FVGNNGETYFNTAALVSCVQNFPKSRGPVV 147 (423)
Q Consensus 86 G~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~-~l~g~g~~~~~ta~l~t~~~nFP~~RG~vv 147 (423)
+.+...++..++. + ..++|.+.+.. ++++.+. .......+..++++++||...
T Consensus 88 ~~~~~~~~~~~~~--~-----~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 141 (393)
T PRK15011 88 CCLLGVLACTLFA--W-----NRNYFVLLFVGVFLSSFGS--TANPQMFALAREHADKTGREA 141 (393)
T ss_pred HHHHHHHHHHHHH--H-----hhHHHHHHHHHHHHHHHHH--hhHHHHHHHHHHHhhhccchH
Confidence 4444344444322 1 12455544332 2333433 234455566677766666543
No 124
>PRK09952 shikimate transporter; Provisional
Probab=96.33 E-value=0.00023 Score=73.86 Aligned_cols=130 Identities=12% Similarity=0.096 Sum_probs=71.2
Q ss_pred ccccccchhh-hhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCch
Q 014518 32 GYLFGSISPV-IKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLP 109 (423)
Q Consensus 32 ~Y~Fs~yS~~-Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~ 109 (423)
.|.+..|.+. +++.+|++.++...++....+...+ .+..|.+.||+|+|.++.++.++..++...++..... .. +
T Consensus 266 ~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~--~~-~ 342 (438)
T PRK09952 266 MYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEA--QS-I 342 (438)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHc--CC-h
Confidence 4544445544 4677899888765555433333322 4568999999999998888876655443332222211 11 2
Q ss_pred HHHHhhheeeecCCceeeehhhhhhhhhcCCC-CCCCeeEeeccc-cchhhHHHHHH
Q 014518 110 LWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGF-AGLGGAILTQV 164 (423)
Q Consensus 110 ~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~-~RG~vvgilk~~-~GLSaaI~s~i 164 (423)
.+.+.+..++.+.+.+...........+.||. .|++..|+.-.. ..+++++-..+
T Consensus 343 ~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i 399 (438)
T PRK09952 343 FWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFI 399 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHH
Confidence 33333333344444443333333444577985 788888885433 22444443333
No 125
>TIGR00895 2A0115 benzoate transport.
Probab=96.32 E-value=0.00027 Score=70.41 Aligned_cols=125 Identities=16% Similarity=0.055 Sum_probs=84.5
Q ss_pred ccccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCc
Q 014518 30 GIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVL 108 (423)
Q Consensus 30 Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~ 108 (423)
...+....|.|.+.+.+|++..+...+.....++..+ .++.|.+.||+|+|.......+...+++.+.+ . ..
T Consensus 264 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~-- 336 (398)
T TIGR00895 264 VGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGS-T----LF-- 336 (398)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHH-H----hh--
Confidence 3445566677888889999999988877766777755 67899999999999555444444444444322 1 11
Q ss_pred hHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHH
Q 014518 109 PLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAIL 161 (423)
Q Consensus 109 ~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~ 161 (423)
+.+.+..+.++.|.+.+..+........+.+| ++||++.|+.-+...+++++-
T Consensus 337 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g 390 (398)
T TIGR00895 337 SPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIG 390 (398)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 22233344455666666666666777788888 579999998887777666554
No 126
>PRK12307 putative sialic acid transporter; Provisional
Probab=96.31 E-value=0.00069 Score=69.22 Aligned_cols=127 Identities=16% Similarity=0.226 Sum_probs=73.7
Q ss_pred cccccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCC
Q 014518 29 AGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPV 107 (423)
Q Consensus 29 ~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~ 107 (423)
.+..|.+..+.|..-+..|++..+...+.....++..+ .++.|.+.||+|+|..+.++.+...++...+... .. ..
T Consensus 244 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~ 320 (426)
T PRK12307 244 FGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRI-PQ--DN 320 (426)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH-cc--cc
Confidence 34444455556665556799988888755555555544 6679999999999999888887765554433211 11 11
Q ss_pred chHHHHhhheeeecCCceeeehhhhhhhhhcCCC-CCCCeeEeeccccchhhHH
Q 014518 108 LPLWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAI 160 (423)
Q Consensus 108 ~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~-~RG~vvgilk~~~GLSaaI 160 (423)
......+++.....+... .........+.||. +||++.|+..+...+++.+
T Consensus 321 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~ 372 (426)
T PRK12307 321 YLLLGACLFGLMATNVGV--GGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTF 372 (426)
T ss_pred HHHHHHHHHHHHHhcccH--hHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHH
Confidence 111112222221111111 11122334688985 6999999887777765543
No 127
>TIGR00893 2A0114 d-galactonate transporter.
Probab=96.31 E-value=0.00018 Score=70.98 Aligned_cols=129 Identities=16% Similarity=0.159 Sum_probs=76.4
Q ss_pred cccccchh-hhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHH--------HHHHHHhhhhhcceeeeeeee
Q 014518 33 YLFGSISP-VIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWG--------ALLVGALQNFIGYGWVWLIVT 102 (423)
Q Consensus 33 Y~Fs~yS~-~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~--------vl~iG~~~~~~Gy~~~~l~~~ 102 (423)
+.+..|.| -+++.+|+|+.+...+.....++..+ .++.|.+.||++.|. ...++.+. .+.......
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-- 307 (399)
T TIGR00893 232 GFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLV--LSLLMFATN-- 307 (399)
T ss_pred HHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHH--HHHHHHHhc--
Confidence 34444444 45678999999988877666666655 678999999999984 11222111 111111111
Q ss_pred CCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHHHHHHHhc
Q 014518 103 GRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIH 169 (423)
Q Consensus 103 g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s~i~~~~f 169 (423)
.. . ..+.......+++.+.+ ..........+.+| ++||++.|+.-....+++.+-..+.....
T Consensus 308 -~~-~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~ 371 (399)
T TIGR00893 308 -YV-N-IPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIA 371 (399)
T ss_pred -cc-h-hHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhc
Confidence 11 1 22222222333333333 44555556667887 57999999999888888877766655544
No 128
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=96.25 E-value=0.00088 Score=77.36 Aligned_cols=119 Identities=19% Similarity=0.170 Sum_probs=85.7
Q ss_pred cchhhhhhccCcchh-HHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHh
Q 014518 37 SISPVIKSSLNYNQK-QIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMC 114 (423)
Q Consensus 37 ~yS~~Lk~~l~~sq~-~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~ 114 (423)
.+..-+++.+|+++. +...+..+..+|..+ +++.|.+.|+++++.++.+|.+...++..++... .+.|.++
T Consensus 254 ~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 326 (1146)
T PRK08633 254 NFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTA-------PSLASVL 326 (1146)
T ss_pred hhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHh-------hhHHHHH
Confidence 455567788999999 888877777787755 6789999999999888888887766666554322 1345555
Q ss_pred hheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHH
Q 014518 115 ILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILT 162 (423)
Q Consensus 115 ~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s 162 (423)
+..++.|.+.+...........+++| +.||++.|+......+++.+..
T Consensus 327 ~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~ 375 (1146)
T PRK08633 327 VLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFL 375 (1146)
T ss_pred HHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHH
Confidence 66666677777766655555667787 5699999988777666664433
No 129
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=96.13 E-value=0.00065 Score=70.04 Aligned_cols=136 Identities=16% Similarity=0.159 Sum_probs=84.0
Q ss_pred cccccchhhhhhccCcchhHHHhhhhccccccc-cccccchhhhhhhhHHHHHHHHhhhhhcceeee-eeeeCCCC--Cc
Q 014518 33 YLFGSISPVIKSSLNYNQKQIARLGVAKDLGDS-VGFLAGSLCEVLPIWGALLVGALQNFIGYGWVW-LIVTGRAP--VL 108 (423)
Q Consensus 33 Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~-~g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~-l~~~g~i~--~~ 108 (423)
+....|.+.+.+..+.+.....++. ..+... ..+.+.++.||+|+|.++++|.....+....+. ......-. ..
T Consensus 270 ~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (451)
T PF00083_consen 270 NFIFYYSPSIFENAGISNSFLATLI--LGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWW 347 (451)
T ss_pred ccccccccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4566789999999999988222211 112222 234556999999999999999988777776664 11111111 01
Q ss_pred hHHHH-hhheeeecCCceeeehhhhhhhhhcCCC-CCCCeeEeeccccchhhHHHHHHHHHhcCC
Q 014518 109 PLWAM-CILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAILTQVYTMIHAP 171 (423)
Q Consensus 109 ~~~~l-~~f~~l~g~g~~~~~ta~l~t~~~nFP~-~RG~vvgilk~~~GLSaaI~s~i~~~~f~~ 171 (423)
+.+.+ +........+.++. .....-...-||. .|.+.+|+.....-+++.+...++....+.
T Consensus 348 ~~~~i~~~~l~~~~~~~g~~-~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~ 411 (451)
T PF00083_consen 348 SILSIVFLALFFAFFSLGWG-PLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNN 411 (451)
T ss_pred ccccceeeeecccccccccc-cccccccccccccccccccccccccccccccccccccccccccc
Confidence 22222 22222233444443 3343455889994 799999999999888888877776555533
No 130
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.04 E-value=0.00043 Score=70.77 Aligned_cols=152 Identities=18% Similarity=0.237 Sum_probs=103.1
Q ss_pred hhhccCcchhHH--Hhhhhcccccc-ccccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHhhhee
Q 014518 42 IKSSLNYNQKQI--ARLGVAKDLGD-SVGFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIF 118 (423)
Q Consensus 42 Lk~~l~~sq~~l--~~i~~a~~vG~-~~g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~ 118 (423)
.+++...+++|. .++=-.|.+-. .+-.+.|.+.||.|.|..+++|.+..++-..++ ++. .++|.+.+-=.
T Consensus 95 ~~~~~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilF--afg-----~sy~~l~vAR~ 167 (464)
T KOG3764|consen 95 PAEAISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILF--AFG-----NSYPMLFVARS 167 (464)
T ss_pred chhccCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHH--HHc-----chhHHHHHHHH
Confidence 455555554444 33322333333 336789999999999999999998876655442 122 25666666778
Q ss_pred eecCCceeeehhhhhhhhhcCCCC--CCCeeEeeccccchhhHH---HHHHHHHhcCCCccceeeeeeechhhhhhhhee
Q 014518 119 VGNNGETYFNTAALVSCVQNFPKS--RGPVVGILKGFAGLGGAI---LTQVYTMIHAPDHANLIFMVAVGPAMVVIALMF 193 (423)
Q Consensus 119 l~g~g~~~~~ta~l~t~~~nFP~~--RG~vvgilk~~~GLSaaI---~s~i~~~~f~~~~~~fllfla~~~~~v~~~~~~ 193 (423)
+-|.|+.+++|+.+--.++.||++ ||.|.|+..++.+|+--+ |.-+-+-+ .+....|+ -|+.+..+-+.+-++
T Consensus 168 LQgvgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~-~Gk~aPFl-VL~~v~Lld~~L~l~ 245 (464)
T KOG3764|consen 168 LQGVGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEF-AGKSAPFL-VLAIVLLLDGALQLL 245 (464)
T ss_pred HhhhhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhh-cCCcCcHH-HHHHHHHHHHHHHHh
Confidence 899999999999999999999964 799999999999987432 33332333 34444553 445556666667777
Q ss_pred eEeccCCcc
Q 014518 194 IIRPVGGHR 202 (423)
Q Consensus 194 fvr~~~~~~ 202 (423)
.++|.+...
T Consensus 246 vi~p~~~~~ 254 (464)
T KOG3764|consen 246 VIEPTEMDP 254 (464)
T ss_pred eeCccccCc
Confidence 777654443
No 131
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=96.00 E-value=0.00063 Score=68.93 Aligned_cols=125 Identities=14% Similarity=0.154 Sum_probs=80.4
Q ss_pred hhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHhhhee
Q 014518 40 PVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIF 118 (423)
Q Consensus 40 ~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~ 118 (423)
.-+++.+|++..+...+....-+|..+ +++.|++.||++.+....+. ...++...+.....- ...+.|.++...+
T Consensus 232 ~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 307 (394)
T PRK11652 232 VLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVI--CCLLAGLLMWIPGWF--GVMNVWTLLVPAA 307 (394)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHh--ccccHHHHHHHHH
Confidence 356667999999888876665566655 56788888888743332222 212222221111100 0113445555666
Q ss_pred eecCCceeeehhhhhhhhhcCCCCCCCeeEeeccccchhhHHHHHHHHHh
Q 014518 119 VGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMI 168 (423)
Q Consensus 119 l~g~g~~~~~ta~l~t~~~nFP~~RG~vvgilk~~~GLSaaI~s~i~~~~ 168 (423)
+.+.|.+..+........+++|+++|++.++.-+...+++++-+.+..-+
T Consensus 308 ~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~~~~~~~~~ 357 (394)
T PRK11652 308 LFFFGAGMLFPLATSGAMEPFPYLAGTAGALLGGLQNIGSGLAALLSAML 357 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 67777777777777778899999999999999888888888777665443
No 132
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=95.95 E-value=0.00021 Score=72.45 Aligned_cols=97 Identities=24% Similarity=0.298 Sum_probs=66.5
Q ss_pred ccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCC
Q 014518 62 LGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP 140 (423)
Q Consensus 62 vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP 140 (423)
++... .++.|.+.||+++|..+.++.++..+++..++.. + +.|.+.+..++.|.|.+..+........+++|
T Consensus 260 ~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~-----~--~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~ 332 (399)
T PRK05122 260 VAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLA-----P--SPWMALIGAALTGFGFSLVFPALGVEAVKRVP 332 (399)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHh-----c--cHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCC
Confidence 34433 4678999999999999888888877777655431 1 23344455566677776655555555678887
Q ss_pred -CCCCCeeEeeccccchhhHHHHHHH
Q 014518 141 -KSRGPVVGILKGFAGLGGAILTQVY 165 (423)
Q Consensus 141 -~~RG~vvgilk~~~GLSaaI~s~i~ 165 (423)
++||++.|+.-....+++++...+.
T Consensus 333 ~~~~g~~~g~~~~~~~~g~~~~~~~~ 358 (399)
T PRK05122 333 PQNRGAALGAYSVFLDLSLGITGPLA 358 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6799999998887777665554443
No 133
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=95.91 E-value=0.00021 Score=75.31 Aligned_cols=152 Identities=14% Similarity=0.085 Sum_probs=91.9
Q ss_pred chhhhhhccC--cchhHHHh----hhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchH
Q 014518 38 ISPVIKSSLN--YNQKQIAR----LGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPL 110 (423)
Q Consensus 38 yS~~Lk~~l~--~sq~~l~~----i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~ 110 (423)
+-..+.+|++ .|.+++++ +..+--+|+.+ .+..|.+.|++|+|..+++..++..++..++.++..-. ++
T Consensus 41 ~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~----~~ 116 (485)
T KOG0569|consen 41 INETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAP----SF 116 (485)
T ss_pred HHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhh----hH
Confidence 4466778888 55555555 33344567766 45799999999999999999999888887755544332 34
Q ss_pred HHHhhheeeecCCceeeehhhhhhhhhcCCC-CCCCeeEeeccccchhhHHHHHHHHH-hcC-CCccceeeeeeechhhh
Q 014518 111 WAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAILTQVYTM-IHA-PDHANLIFMVAVGPAMV 187 (423)
Q Consensus 111 ~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~-~RG~vvgilk~~~GLSaaI~s~i~~~-~f~-~~~~~fllfla~~~~~v 187 (423)
..+-+==++.|..++.......+=-..-=|+ .||.+.-+.--.+.++-.+-.++..- +++ +|...+++....+|.++
T Consensus 117 e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~ 196 (485)
T KOG0569|consen 117 EMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALL 196 (485)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHH
Confidence 4445555667777777777777767777786 49976554443333333222222221 222 22334555555545544
Q ss_pred hhhhee
Q 014518 188 VIALMF 193 (423)
Q Consensus 188 ~~~~~~ 193 (423)
.++..+
T Consensus 197 ~l~~l~ 202 (485)
T KOG0569|consen 197 QLALLP 202 (485)
T ss_pred HHHHHh
Confidence 444433
No 134
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=95.88 E-value=0.00049 Score=70.26 Aligned_cols=121 Identities=17% Similarity=0.321 Sum_probs=70.3
Q ss_pred cchhhhhhccCcchhHHHhhh-hcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeee-eeeCCCCCchHHHH
Q 014518 37 SISPVIKSSLNYNQKQIARLG-VAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWL-IVTGRAPVLPLWAM 113 (423)
Q Consensus 37 ~yS~~Lk~~l~~sq~~l~~i~-~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l-~~~g~i~~~~~~~l 113 (423)
...+-+.+.+|++.++...+. ..+.++..+ +++.|.+.||+|+|..+.++.+...+....++. .+.. + +.|.+
T Consensus 231 ~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~--~--~~~~~ 306 (402)
T PRK11902 231 LSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTP--K--HLWTM 306 (402)
T ss_pred HHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC--C--cHHHH
Confidence 344567788999999998864 334444444 578999999999988877777665444333221 1211 1 22332
Q ss_pred hhhe----eeecCCceeeehhhhhhhhhcCCCCCCCeeEeeccccchhhHHHHHH
Q 014518 114 CILI----FVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQV 164 (423)
Q Consensus 114 ~~f~----~l~g~g~~~~~ta~l~t~~~nFP~~RG~vvgilk~~~GLSaaI~s~i 164 (423)
.... +..+.+.+..++..+.-+.+.||.+ ..++.-+..++++.+.+.+
T Consensus 307 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~ 358 (402)
T PRK11902 307 ALAIGIENLCGGMGTAAFVALLMALCNRSFSAT---QYALLSALASVGRVYVGPT 358 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHH---HHHHHHHHHHHHHHHHHHH
Confidence 2222 3455555555666666666777743 2344444445666554443
No 135
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=95.88 E-value=0.00018 Score=70.54 Aligned_cols=124 Identities=21% Similarity=0.294 Sum_probs=83.1
Q ss_pred cccccchhh-hhhccCcc-hhHHHhhhhcccccc-ccccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCch
Q 014518 33 YLFGSISPV-IKSSLNYN-QKQIARLGVAKDLGD-SVGFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLP 109 (423)
Q Consensus 33 Y~Fs~yS~~-Lk~~l~~s-q~~l~~i~~a~~vG~-~~g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~ 109 (423)
+.+..|.|. +++.+|++ ..+...+-....++. ..+++.|.+.||++++....+......++...+.+.... .. +
T Consensus 223 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~ 299 (352)
T PF07690_consen 223 SGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFS--SS-P 299 (352)
T ss_dssp HHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHH--CH-H
T ss_pred HHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHh--hh-H
Confidence 337777777 49999999 677776444444444 447889999999998666666555555544443222222 11 3
Q ss_pred HHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHH
Q 014518 110 LWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAI 160 (423)
Q Consensus 110 ~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI 160 (423)
.|.++ ..++.|.+.+..+........+.+| ++||++.|+......+++.+
T Consensus 300 ~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~i 350 (352)
T PF07690_consen 300 VWLII-ALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGII 350 (352)
T ss_dssp HHHHH-HHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 44444 3444566777778888888888886 78999999988888777765
No 136
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=95.82 E-value=0.0012 Score=66.83 Aligned_cols=63 Identities=10% Similarity=0.033 Sum_probs=47.6
Q ss_pred cchh-hhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeee
Q 014518 37 SISP-VIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWL 99 (423)
Q Consensus 37 ~yS~-~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l 99 (423)
.+.| -+++.+|++..+...+.....++..+ .++.|.+.||+|+|.+..++.++..+|...++.
T Consensus 224 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~ 288 (392)
T PRK10473 224 NTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLAL 288 (392)
T ss_pred HhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 3444 45678899998887755555555544 678999999999999999999888888776554
No 137
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=95.76 E-value=0.006 Score=62.81 Aligned_cols=115 Identities=16% Similarity=0.071 Sum_probs=91.1
Q ss_pred ccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchH
Q 014518 32 GYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPL 110 (423)
Q Consensus 32 ~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~ 110 (423)
=+.-.--=|++.+.+|.|..+.-..-+.-..|..+ +++-..+.||+.+|.+++...+++.+|=.+-++ ++++
T Consensus 29 Efv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~al-------Ap~f 101 (394)
T COG2814 29 EFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSAL-------APSF 101 (394)
T ss_pred HHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHH-------hccH
Confidence 45555667899999999999999855555566544 889999999999999999988887777665222 3578
Q ss_pred HHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccc
Q 014518 111 WAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGF 153 (423)
Q Consensus 111 ~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~ 153 (423)
+.+++-=++.|...+.+..-+...++|-=| ++||.++|++.+.
T Consensus 102 ~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G 145 (394)
T COG2814 102 AVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTG 145 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHH
Confidence 899998899999999777777777777775 6899999887654
No 138
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=95.75 E-value=0.00027 Score=78.49 Aligned_cols=101 Identities=12% Similarity=0.067 Sum_probs=65.4
Q ss_pred cccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcC
Q 014518 61 DLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNF 139 (423)
Q Consensus 61 ~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nF 139 (423)
.++..+ .++.|++.||+|+|.+++++.++..++.++++.. ++ ..+.+.+. ++.+...+....+...-....|
T Consensus 605 ~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~-----~s-~~~ll~~~-~l~g~~~~~~~~~~~a~~aEl~ 677 (742)
T TIGR01299 605 TLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFG-----NS-ESAMIALL-CLFGGLSIAAWNALDVLTVELY 677 (742)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH-----cc-HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHc
Confidence 344444 5689999999999999999888877766654422 12 12222222 2333333333344556678889
Q ss_pred CC-CCCCeeEeeccccchhhHHHHHHHHHh
Q 014518 140 PK-SRGPVVGILKGFAGLGGAILTQVYTMI 168 (423)
Q Consensus 140 P~-~RG~vvgilk~~~GLSaaI~s~i~~~~ 168 (423)
|. .||++.|+.-+...+++.+-..+...+
T Consensus 678 Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L 707 (742)
T TIGR01299 678 PSDKRATAFGFLNALCKAAAVLGILIFGSF 707 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 95 699999999998888887766554433
No 139
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=95.72 E-value=0.00094 Score=70.72 Aligned_cols=131 Identities=21% Similarity=0.114 Sum_probs=99.0
Q ss_pred cccccchhhhh-hccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchH
Q 014518 33 YLFGSISPVIK-SSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPL 110 (423)
Q Consensus 33 Y~Fs~yS~~Lk-~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~ 110 (423)
+.-+.||...+ +.++.+....++....-.+|..+ .++.|.+.|++|+|++++++.++..++-.+ .. -++++
T Consensus 99 ~~~~~~s~~~~~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~-----~a--~a~~~ 171 (521)
T KOG0255|consen 99 YGSSVYSIVSEWNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGIL-----TA--FAPNY 171 (521)
T ss_pred CCCCcccccchhceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHH-----HH--HhCcH
Confidence 33455666665 67777888888888888888877 567999999999999999999887765533 11 13478
Q ss_pred HHHhhheeeecCCceeeehhhhhhhhhcC-CCCCCCeeEeeccccchhhHHHHHHHHHhcCCC
Q 014518 111 WAMCILIFVGNNGETYFNTAALVSCVQNF-PKSRGPVVGILKGFAGLGGAILTQVYTMIHAPD 172 (423)
Q Consensus 111 ~~l~~f~~l~g~g~~~~~ta~l~t~~~nF-P~~RG~vvgilk~~~GLSaaI~s~i~~~~f~~~ 172 (423)
+.++++=++.|++.+...+.+....+..+ |++||.+..+ -.+ -.++.++.....+++-++
T Consensus 172 ~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~-~~~~~~~~~~~~a~~~~~ 232 (521)
T KOG0255|consen 172 WMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGF-FFVGGLMLPAGAAYITRD 232 (521)
T ss_pred HHHHHHHHHHHhhccchhHHhHhhheeecCcchhhHHHHH-HHH-HHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999 6889999988 444 444444444444444443
No 140
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=95.71 E-value=0.0006 Score=69.61 Aligned_cols=122 Identities=12% Similarity=0.084 Sum_probs=78.4
Q ss_pred cccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCch
Q 014518 31 IGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLP 109 (423)
Q Consensus 31 t~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~ 109 (423)
..+.+..|.|.+-+++|++..+...+.....++..+ .+..|.+.||.++|.+..++.++..+|+.++.. +.. ...
T Consensus 220 ~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~-~~~---~~~ 295 (393)
T PRK09705 220 GYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIW-LPL---QLP 295 (393)
T ss_pred HHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHH-ccc---hHH
Confidence 344566677777777899999887755555555544 567999999999999988888887777764321 111 111
Q ss_pred HHHHhhheeeecCCceeeehhhhhhhhhcCC--CCCCCeeEeeccccchhhHH
Q 014518 110 LWAMCILIFVGNNGETYFNTAALVSCVQNFP--KSRGPVVGILKGFAGLGGAI 160 (423)
Q Consensus 110 ~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP--~~RG~vvgilk~~~GLSaaI 160 (423)
....+ +.+.|.+..+..+....++.+| ++||++.|+..+...+++.+
T Consensus 296 ~~~~~----l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~ 344 (393)
T PRK09705 296 VLWAM----VCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGL 344 (393)
T ss_pred HHHHH----HHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 11111 2344555445555556677774 47899998877766555443
No 141
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=95.58 E-value=0.0013 Score=67.22 Aligned_cols=131 Identities=5% Similarity=-0.087 Sum_probs=80.2
Q ss_pred cccccc-hhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchH
Q 014518 33 YLFGSI-SPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPL 110 (423)
Q Consensus 33 Y~Fs~y-S~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~ 110 (423)
|.+..| .|-+.+++|++.++...+-....+|..+ +++.|.+.||.+.+.....+.+....+..+... . . +.
T Consensus 233 ~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~~-----~-~-~~ 305 (394)
T PRK10213 233 FAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPLVLAVSALVLTLW-----G-S-DK 305 (394)
T ss_pred HHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHH-----h-h-hH
Confidence 344344 4777788999999988865555566544 678899999965544333333333333333211 1 1 23
Q ss_pred HHHhhheeeecCCceeeehhhhhhhhhcCCCCCCCeeEeeccccchhhHHHHHHHHHhcC
Q 014518 111 WAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (423)
Q Consensus 111 ~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~~RG~vvgilk~~~GLSaaI~s~i~~~~f~ 170 (423)
|.+-...++.|.|.+..+.....-..++.|++++.+.++..+...++..+=..+.-..++
T Consensus 306 ~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~ 365 (394)
T PRK10213 306 IVATGVAIIWGLTFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIGGYALD 365 (394)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 444455566667777777666656778889888888877766666665555555444443
No 142
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=95.54 E-value=0.00061 Score=71.71 Aligned_cols=105 Identities=12% Similarity=0.146 Sum_probs=71.0
Q ss_pred ccccccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCCC-
Q 014518 63 GDSVGFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPK- 141 (423)
Q Consensus 63 G~~~g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~- 141 (423)
+....+++|.+.||+|++.++.++.+...++...+++.+.... ..+++....-........+..|.+..+..-+-||+
T Consensus 299 ~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~-~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~ 377 (462)
T PRK15034 299 GAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTG-SGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQI 377 (462)
T ss_pred HHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcccc-ccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhh
Confidence 4444668999999999999999888876666655444443322 22444332222223345556677778888888885
Q ss_pred ---------------------CCCCeeEeeccccchhhHHHHHHHHHh
Q 014518 142 ---------------------SRGPVVGILKGFAGLGGAILTQVYTMI 168 (423)
Q Consensus 142 ---------------------~RG~vvgilk~~~GLSaaI~s~i~~~~ 168 (423)
+-|.|+|+..+.-|++|.++-.+....
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~ 425 (462)
T PRK15034 378 TIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMS 425 (462)
T ss_pred hhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHH
Confidence 457899999999999999887655444
No 143
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=95.53 E-value=0.00083 Score=68.55 Aligned_cols=120 Identities=11% Similarity=-0.018 Sum_probs=83.6
Q ss_pred hhhhccCcchhHHHhhhhccccccccccccchhhhhh-----hhH-HHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHh
Q 014518 41 VIKSSLNYNQKQIARLGVAKDLGDSVGFLAGSLCEVL-----PIW-GALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMC 114 (423)
Q Consensus 41 ~Lk~~l~~sq~~l~~i~~a~~vG~~~g~~~G~l~D~~-----gP~-~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~ 114 (423)
-|++ .|+|-+|+..+....-. -.+.++.|.+.||+ |.| ..+.++.+...+...++... .. ..++|.+.
T Consensus 25 ~l~~-~g~~~~~ig~~~~~~~~-~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~--~~--~~~~~~l~ 98 (402)
T PRK11902 25 WMTV-EGLDIQTIGFFSLVGQA-YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFC--PP--HAALWPLA 98 (402)
T ss_pred HHHH-cCCCHHHHHHHHHHHHH-HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhc--Cc--cchHHHHH
Confidence 3555 49999999988765554 36689999999999 554 46666666655555543322 11 12467776
Q ss_pred hheeeecCCceeeehhhhhhhhhcCCCC-CCCeeEeeccccchhhHHHHHHHH
Q 014518 115 ILIFVGNNGETYFNTAALVSCVQNFPKS-RGPVVGILKGFAGLGGAILTQVYT 166 (423)
Q Consensus 115 ~f~~l~g~g~~~~~ta~l~t~~~nFP~~-RG~vvgilk~~~GLSaaI~s~i~~ 166 (423)
.+.++.+...+..|.+.-.-..+++|++ ||.+.++....++++..+-..+..
T Consensus 99 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~ 151 (402)
T PRK11902 99 GLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLAL 151 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHH
Confidence 6666666777778888888888999865 999999988877776655555433
No 144
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=95.42 E-value=0.0034 Score=64.87 Aligned_cols=62 Identities=8% Similarity=0.143 Sum_probs=49.9
Q ss_pred cccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhh-hhHHHHHHHHhhhhhccee
Q 014518 35 FGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVL-PIWGALLVGALQNFIGYGW 96 (423)
Q Consensus 35 Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~-gP~~vl~iG~~~~~~Gy~~ 96 (423)
++..++.+++++|+|.+|+..+.....++..+ .++.|.+.||+ ++|.++.++.+...++..+
T Consensus 22 ~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~ 85 (418)
T TIGR00889 22 LVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFF 85 (418)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 45567888999999999999998888888855 88999999998 4588888777776555443
No 145
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=95.41 E-value=0.00095 Score=77.40 Aligned_cols=130 Identities=14% Similarity=0.005 Sum_probs=85.7
Q ss_pred hhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeee-------------CC
Q 014518 39 SPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVT-------------GR 104 (423)
Q Consensus 39 S~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~-------------g~ 104 (423)
..-+++.+|++..+...+-.+..+|..+ +++.|.+.|+.+.+..+.+|.+...++...+..... ..
T Consensus 249 p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 328 (1140)
T PRK06814 249 PLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVF 328 (1140)
T ss_pred HHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhh
Confidence 3445778999999999877777788766 778999998877655555555444333322211100 00
Q ss_pred CCCchHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHHHHHHHh
Q 014518 105 APVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMI 168 (423)
Q Consensus 105 i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s~i~~~~ 168 (423)
....+.|.+++..++.|.+.++.+........+.+| ++||.+.|+.-....++.++-..+...+
T Consensus 329 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l 393 (1140)
T PRK06814 329 LSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALL 393 (1140)
T ss_pred hcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHH
Confidence 111356677777777788888877777777778887 5799999998777666665555544444
No 146
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=95.30 E-value=0.0013 Score=69.86 Aligned_cols=136 Identities=20% Similarity=0.164 Sum_probs=100.0
Q ss_pred hHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHhhheeeecCCceeeeh
Q 014518 51 KQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNT 129 (423)
Q Consensus 51 ~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~t 129 (423)
++.++++...++|+.+ .+++|.+.|++|+|..++++.+++.+|..+...+. +++.+.+--++.|.|.+....
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~-------~~~~l~~GR~l~G~g~G~~~~ 161 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAP-------SWYQLIVGRILTGLGVGGASV 161 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhh-------hHHHHHHHHHHhccchhhhhh
Confidence 4568899999999977 77899999999999999999999999999866554 466777777788888887765
Q ss_pred hhhhhhhhcCCC-CCCCeeEeeccccchhhHHHHHHHHHhcCCC--ccceeeeeeechhhhhhhheee
Q 014518 130 AALVSCVQNFPK-SRGPVVGILKGFAGLGGAILTQVYTMIHAPD--HANLIFMVAVGPAMVVIALMFI 194 (423)
Q Consensus 130 a~l~t~~~nFP~-~RG~vvgilk~~~GLSaaI~s~i~~~~f~~~--~~~fllfla~~~~~v~~~~~~f 194 (423)
.+-+-...-=|. .||..+.+..-... .|..++.+-..+.+.+ ...+.+.++..|.++-.+++++
T Consensus 162 ~~piy~sEiap~~~RG~l~~~~~l~~~-~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~ 228 (513)
T KOG0254|consen 162 LAPVYISEIAPAHIRGTLVSLYQLFIT-IGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALGMLF 228 (513)
T ss_pred cchhhHhhcCChhhhHHHHHHHHHHHH-HHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHh
Confidence 544444444475 79999998888887 4445544444444443 3456666666777776666333
No 147
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=95.23 E-value=0.0043 Score=65.32 Aligned_cols=155 Identities=15% Similarity=0.161 Sum_probs=100.3
Q ss_pred hhcccc-cccccchhhhhhccCcchhHHHhhhhccccccccccccchhhhhhh-----hHHHHHHHHhhh-hhcceeeee
Q 014518 27 SCAGIG-YLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSVGFLAGSLCEVLP-----IWGALLVGALQN-FIGYGWVWL 99 (423)
Q Consensus 27 l~~Gt~-Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~g~~~G~l~D~~g-----P~~vl~iG~~~~-~~Gy~~~~l 99 (423)
.+-|.. -....-++-||+++|+|.+|++.+.....+.-.+-+++|.+.|++| .|+.++++.++. ++++..+.
T Consensus 36 ~~qGl~~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~- 114 (468)
T TIGR00788 36 FVKGIAGLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPFAGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLP- 114 (468)
T ss_pred HHhhHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcc-
Confidence 444444 2234567779999999999998887777788888888999999998 788888888776 45554432
Q ss_pred eeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCCCCCCCeeEeeccccch--hhHHHHHHHHHhcCC--Cccc
Q 014518 100 IVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGL--GGAILTQVYTMIHAP--DHAN 175 (423)
Q Consensus 100 ~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~~RG~vvgilk~~~GL--SaaI~s~i~~~~f~~--~~~~ 175 (423)
.. ++ ......++.++.+++.+..|.++=.-.++..|++++...++....++. .|.+++.+-.++..+ ..+.
T Consensus 115 -~~---~~-~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~ 189 (468)
T TIGR00788 115 -GK---VS-SAKVAAAFIFLAALAKALYDVLVDSLYSERIRESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRI 189 (468)
T ss_pred -cc---cc-hHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhhcCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcch
Confidence 11 11 232333466778899999999999899999995554444444444443 355555555554432 2333
Q ss_pred eeeeeeechhhh
Q 014518 176 LIFMVAVGPAMV 187 (423)
Q Consensus 176 fllfla~~~~~v 187 (423)
-++..+.++.+.
T Consensus 190 ~f~~~a~l~ll~ 201 (468)
T TIGR00788 190 LFLITAALLLLQ 201 (468)
T ss_pred HHHHHHHHHHHH
Confidence 333344444444
No 148
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=95.23 E-value=0.00088 Score=68.56 Aligned_cols=114 Identities=16% Similarity=0.179 Sum_probs=65.2
Q ss_pred ccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHhhheeeecCC
Q 014518 45 SLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNG 123 (423)
Q Consensus 45 ~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g 123 (423)
.++ +..+...+.....++..+ .++.|.+.||+|+|.++.+|.++..+|+..+++.- . +.+.+.+..++.+.+
T Consensus 252 ~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~g~~ 324 (437)
T TIGR00792 252 VLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAG-----S-NLPLILVLIILAGFG 324 (437)
T ss_pred ecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcc-----h-hHHHHHHHHHHHHHH
Confidence 344 334444444444566545 56799999999999999999988888887765421 1 234444455555555
Q ss_pred ceeeehhh--hhhhh---hc--C-CCCCCCeeEeeccccc----hhhHHHHHHH
Q 014518 124 ETYFNTAA--LVSCV---QN--F-PKSRGPVVGILKGFAG----LGGAILTQVY 165 (423)
Q Consensus 124 ~~~~~ta~--l~t~~---~n--F-P~~RG~vvgilk~~~G----LSaaI~s~i~ 165 (423)
.+..+... +.+.. .. . ++.+|.+.|+.-.... +++.+.+.+.
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll 378 (437)
T TIGR00792 325 QNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLIL 378 (437)
T ss_pred HHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55443221 21111 11 1 3457888876654444 4444444443
No 149
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=95.03 E-value=0.0029 Score=63.95 Aligned_cols=91 Identities=13% Similarity=0.075 Sum_probs=59.4
Q ss_pred ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCC
Q 014518 67 GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGP 145 (423)
Q Consensus 67 g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~ 145 (423)
.+..|.+.||+|+|.++.++.+...++..++... + +.|.+.+..++.|.+.+....+......+..| ++||.
T Consensus 275 ~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~ 347 (408)
T PRK09874 275 APRLGKLGDRIGPEKILITALIFSVLLLIPMSFV-----Q--TPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGR 347 (408)
T ss_pred HHHHHHHHhccccchhHHHHHHHHHHHHHHHHHh-----c--cHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCccccee
Confidence 5568999999999999998888766665442211 1 23444455555666666655554444455666 57899
Q ss_pred eeEeeccccchhhHHHHHH
Q 014518 146 VVGILKGFAGLGGAILTQV 164 (423)
Q Consensus 146 vvgilk~~~GLSaaI~s~i 164 (423)
+.|+.-....++.++-..+
T Consensus 348 ~~~~~~~~~~~g~~~gp~~ 366 (408)
T PRK09874 348 IFSYNQSFRDIGNVTGPLM 366 (408)
T ss_pred eehHHHHHHHHHHHhhHHH
Confidence 9998777766665554333
No 150
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=94.95 E-value=0.002 Score=67.01 Aligned_cols=135 Identities=17% Similarity=0.059 Sum_probs=74.2
Q ss_pred ccccccchhhh-hhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhH-----H---HHHHHHhhhhhcceeeeeee
Q 014518 32 GYLFGSISPVI-KSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIW-----G---ALLVGALQNFIGYGWVWLIV 101 (423)
Q Consensus 32 ~Y~Fs~yS~~L-k~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~-----~---vl~iG~~~~~~Gy~~~~l~~ 101 (423)
.|.+..|-|.. ++.+|+|..+...+.....++..+ +++.|.+.|+.+.| . .+..+......+..++.+.+
T Consensus 277 ~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (465)
T TIGR00894 277 YTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPY 356 (465)
T ss_pred HHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556666644 678999999998877666677655 78899999987643 1 11111111111111111111
Q ss_pred eCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCCCCCCCeeEeeccccchhhHHHHHHHHHhcC
Q 014518 102 TGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIHA 170 (423)
Q Consensus 102 ~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~~RG~vvgilk~~~GLSaaI~s~i~~~~f~ 170 (423)
.. .. .+ ...++.++++.+.+...........+..|+.+|.+.|+.-...-+++.+...+.....+
T Consensus 357 ~~--~~-~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~ 421 (465)
T TIGR00894 357 LS--AA-FY-LTIIILTLANAVSSGPLAGVLINSLDLAPRFLGFIKGITGLPGFIGGLIASTLAGNILS 421 (465)
T ss_pred cC--Cc-hH-HHHHHHHHHHHHhhhhhhhhhhchhhcChhHHHHHHHHHHHHHHHHHHHHHHhhheeeC
Confidence 11 11 22 22222233333333333333344556678889999888887777777777666544433
No 151
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=94.92 E-value=0.0045 Score=64.49 Aligned_cols=155 Identities=17% Similarity=0.088 Sum_probs=110.8
Q ss_pred chhhhhhccCcchhHHHhhhhccccccc-cccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHhhh
Q 014518 38 ISPVIKSSLNYNQKQIARLGVAKDLGDS-VGFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCIL 116 (423)
Q Consensus 38 yS~~Lk~~l~~sq~~l~~i~~a~~vG~~-~g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f 116 (423)
=-+++++.+|++-++.-++++.-+++-- .+++.|++.||+-++.++.+|.....+.-+. .+.+ .-+|++.++
T Consensus 55 v~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~-----~~fs--~~Fwq~~l~ 127 (493)
T KOG1330|consen 55 VLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFA-----SGFS--NHFWQVLLC 127 (493)
T ss_pred hhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHH-----HHHH--HHHHHHHHH
Confidence 4467889999999999999998888874 4889999999999999988888774433322 2323 259999999
Q ss_pred eeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHHHHHHHhcCCCcc---ceeeeeeechhhhhhhhe
Q 014518 117 IFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIHAPDHA---NLIFMVAVGPAMVVIALM 192 (423)
Q Consensus 117 ~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s~i~~~~f~~~~~---~fllfla~~~~~v~~~~~ 192 (423)
=.+.|.|-....+.+-.-...+|| ++||++.|+.-=. +=.|.++..++.....+.+. .=+..-+++..+++++..
T Consensus 128 R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~-ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~ 206 (493)
T KOG1330|consen 128 RGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFA-IPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVF 206 (493)
T ss_pred HHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhh-cccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHH
Confidence 999999999999999999999999 4799776653211 01112222222222222221 224556677778888888
Q ss_pred eeEeccCC
Q 014518 193 FIIRPVGG 200 (423)
Q Consensus 193 ~fvr~~~~ 200 (423)
.|+|-|++
T Consensus 207 ~f~~eP~r 214 (493)
T KOG1330|consen 207 LFVREPER 214 (493)
T ss_pred hhccCccc
Confidence 89998876
No 152
>PRK03633 putative MFS family transporter protein; Provisional
Probab=94.84 E-value=0.0024 Score=64.57 Aligned_cols=128 Identities=12% Similarity=0.000 Sum_probs=74.9
Q ss_pred HHHHhhcccccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeee
Q 014518 23 MWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIV 101 (423)
Q Consensus 23 ~~i~l~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~ 101 (423)
+...++.+..|.| .|..-++.|++.++...+.....++..+ .++.|.+.||+|+|.++.++.+...+|...+.
T Consensus 210 ~~~~~~~~~~~~~---lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--- 283 (381)
T PRK03633 210 IISGIVLGSLYGL---MPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--- 283 (381)
T ss_pred HHHHHHHHHHHHH---HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh---
Confidence 3333444555544 4444455799988887754444455544 66789999999999999888888777765532
Q ss_pred eCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCCC-CCCCeeEeeccccchhhHHHHH
Q 014518 102 TGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAILTQ 163 (423)
Q Consensus 102 ~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~-~RG~vvgilk~~~GLSaaI~s~ 163 (423)
. . ...++.+.++ +.+.......+.....++.|+ +++.+.+.....+++++++-..
T Consensus 284 -~-~-~~~~~~~~l~----g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~ 339 (381)
T PRK03633 284 -S-Q-AAMAPALFIL----GAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPS 339 (381)
T ss_pred -h-h-HHHHHHHHHH----HHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1 1112222221 222222344455556788875 5676666655556665554443
No 153
>PRK12382 putative transporter; Provisional
Probab=94.71 E-value=0.00086 Score=67.89 Aligned_cols=116 Identities=18% Similarity=0.219 Sum_probs=74.6
Q ss_pred hccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHhhheeeecC
Q 014518 44 SSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNN 122 (423)
Q Consensus 44 ~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~ 122 (423)
++.++++..... ....++..+ .++.|.+.||+|+|..+.++.+...+++.++... + +.+.+.+..++.|.
T Consensus 244 ~~~~~~~~~~~~--~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~-----~--~~~~~~~~~~l~g~ 314 (392)
T PRK12382 244 ASKGWAMAGFTL--TAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLA-----P--TAWVALAGAALTGA 314 (392)
T ss_pred HhcCCchhHHHH--HHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHc-----c--cHHHHHHHHHHHHH
Confidence 335666544332 222333333 5678999999999999888888888887764431 1 23333444455566
Q ss_pred CceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHHHHHHHh
Q 014518 123 GETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMI 168 (423)
Q Consensus 123 g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s~i~~~~ 168 (423)
+.+..+.+......+.+| ++||++.|+.-....+++++-..+...+
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l 361 (392)
T PRK12382 315 GCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGML 361 (392)
T ss_pred HHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666555555555677786 7899999999888887776655444443
No 154
>PRK09848 glucuronide transporter; Provisional
Probab=94.63 E-value=0.0014 Score=68.06 Aligned_cols=115 Identities=17% Similarity=0.119 Sum_probs=68.6
Q ss_pred hhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHhhheeee
Q 014518 42 IKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVG 120 (423)
Q Consensus 42 Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~ 120 (423)
+++.+|.+......+.....++..+ .++.|.+.||+|+|.++.+|.++..+|+.+++.. +..++|.+.+..++.
T Consensus 255 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~-----~~~~~~~~~~~~~l~ 329 (448)
T PRK09848 255 VRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWV-----SVWSLPVALVALAIA 329 (448)
T ss_pred EeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc-----CchhHHHHHHHHHHH
Confidence 4566787665444444433444443 5679999999999999999999988888776532 112455555555666
Q ss_pred cCCceeeehhhhhhhhhcCCC--------CCCCeeEeeccccchhhHHH
Q 014518 121 NNGETYFNTAALVSCVQNFPK--------SRGPVVGILKGFAGLGGAIL 161 (423)
Q Consensus 121 g~g~~~~~ta~l~t~~~nFP~--------~RG~vvgilk~~~GLSaaI~ 161 (423)
+.|.+.............=|. ++|...|+..-..-++.++-
T Consensus 330 g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig 378 (448)
T PRK09848 330 SIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIG 378 (448)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHH
Confidence 777666554433333222231 24666665444443444443
No 155
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=94.62 E-value=0.011 Score=58.28 Aligned_cols=127 Identities=20% Similarity=0.138 Sum_probs=66.5
Q ss_pred ccccchhh-hhhccCcchhHHHhhhhcccccccc-ccccchhhhhhh--hHHHH-HHHHhhhhhcceeeeeeeeCCCCCc
Q 014518 34 LFGSISPV-IKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLP--IWGAL-LVGALQNFIGYGWVWLIVTGRAPVL 108 (423)
Q Consensus 34 ~Fs~yS~~-Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~g--P~~vl-~iG~~~~~~Gy~~~~l~~~g~i~~~ 108 (423)
.+..|.|. +++.+|++..+...+.....++..+ .++.|.+.||.. ++..+ .+......++..+++... ..
T Consensus 234 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 308 (379)
T TIGR00881 234 GILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNP-----AA 308 (379)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCc-----ch
Confidence 33334444 5678999999988866666666655 667999999753 22222 222222222222222111 11
Q ss_pred hHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHHHHH
Q 014518 109 PLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVY 165 (423)
Q Consensus 109 ~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s~i~ 165 (423)
+.+.+.+..++.|...............+.+| ++||++.|+.-....+++.+-..+.
T Consensus 309 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~ 366 (379)
T TIGR00881 309 NPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPL 366 (379)
T ss_pred hHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhH
Confidence 22222222223332222222222234567787 5799999998877777766554443
No 156
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=94.51 E-value=0.011 Score=64.25 Aligned_cols=222 Identities=17% Similarity=0.132 Sum_probs=113.1
Q ss_pred CcchhHHHHHHHHhhcc--cccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhh
Q 014518 14 NRWLVFVAAMWIQSCAG--IGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQN 90 (423)
Q Consensus 14 ~Rw~~l~a~~~i~l~~G--t~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~ 90 (423)
+|.+..++++....++. ..+..+.--+++-..+|=+ .+...++++-.++..+ ..+.|.+.|.+|+|.++++|.++.
T Consensus 40 ~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~ 118 (599)
T PF06609_consen 40 PRFIASFAAFSLAVIAAYFVLVLPASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLG 118 (599)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHH
Confidence 45555555554444433 2222222224455556554 4555677777788755 567999999999999999999999
Q ss_pred hhcceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHHHHHHHhc
Q 014518 91 FIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIH 169 (423)
Q Consensus 91 ~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s~i~~~~f 169 (423)
.+|..... + ..++-.++.=+.+.|.|.+.-....+. ...--| +.|+...++....+-....+=..+...+.
T Consensus 119 vvG~Iv~a---t----A~~~~~~iag~~l~GvgaG~~~~~~~~-isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~ 190 (599)
T PF06609_consen 119 VVGSIVCA---T----AQNMNTFIAGMVLYGVGAGVQELAALA-ISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFA 190 (599)
T ss_pred HhHHHHhh---c----CCcHHHHHHHHHHHHHhhHHHHHHHHH-HHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhc
Confidence 99987622 1 124445666666666665544433333 233346 46765444332211111101111222333
Q ss_pred CCCcccee-eeeeechhhhhhhheeeEeccCCccccccC-----CCCcee-ehhHH-HHHHHHHHHHHHHHHhh-hccCc
Q 014518 170 APDHANLI-FMVAVGPAMVVIALMFIIRPVGGHRQVRPS-----DSSSFT-FIYSV-CLLLAAYLMGVMLVEDL-VDLNH 240 (423)
Q Consensus 170 ~~~~~~fl-lfla~~~~~v~~~~~~fvr~~~~~~~~~~~-----~~~~f~-~~~~~-~~~l~~yl~~~~~~~~~-~~~~~ 240 (423)
......+. ++..+...+..++.++|-+||++.+.+.++ .-+++- .+..+ ...++.||+..+.-... .+.+.
T Consensus 191 ~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~S 270 (599)
T PF06609_consen 191 AHSGWRWIFYIFIIWSGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKS 270 (599)
T ss_pred cCCCcchHHHHHHHHHHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCC
Confidence 22233332 222333444444556666776654321111 112222 23322 33577788887666653 45544
Q ss_pred hhHH
Q 014518 241 TVII 244 (423)
Q Consensus 241 ~~~~ 244 (423)
+..+
T Consensus 271 a~VI 274 (599)
T PF06609_consen 271 AHVI 274 (599)
T ss_pred ccch
Confidence 4333
No 157
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=94.46 E-value=0.0036 Score=63.58 Aligned_cols=123 Identities=11% Similarity=0.062 Sum_probs=66.1
Q ss_pred cccchhhhhhccCcchhHHHhhhhccccccc-cccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHH
Q 014518 35 FGSISPVIKSSLNYNQKQIARLGVAKDLGDS-VGFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAM 113 (423)
Q Consensus 35 Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~-~g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l 113 (423)
++.|-++.-+..+.+.++...+.....+... ..++.|.+.||+|+|..+.+|.++..+++.++.. .+ +.|.+
T Consensus 238 ~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~-----~~--~~~~~ 310 (396)
T TIGR00882 238 FANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSF-----AT--TALEV 310 (396)
T ss_pred HHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHh-----cC--ChHHH
Confidence 3444433322235555555554444444443 3577899999999999999999887777765332 11 23334
Q ss_pred hhheeeecCCceeeehhhhhhhhhcCCC-CCCCeeEe-eccccchhhHHHHHH
Q 014518 114 CILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGI-LKGFAGLGGAILTQV 164 (423)
Q Consensus 114 ~~f~~l~g~g~~~~~ta~l~t~~~nFP~-~RG~vvgi-lk~~~GLSaaI~s~i 164 (423)
.+..++.|.+.......+..-+.+.+|+ .|+++.+. .-...++++.+...+
T Consensus 311 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l 363 (396)
T TIGR00882 311 VILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTL 363 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHh
Confidence 4444555555444433333334445553 23333333 123345555555433
No 158
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=94.31 E-value=0.0071 Score=63.68 Aligned_cols=120 Identities=13% Similarity=-0.017 Sum_probs=87.7
Q ss_pred hccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCC---CchHHHHhhheee
Q 014518 44 SSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAP---VLPLWAMCILIFV 119 (423)
Q Consensus 44 ~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~---~~~~~~l~~f~~l 119 (423)
+.+|++..++.++.....++..+ ....+.+.++++.|.++.++.++..+++......++..-. .+..|.+.....+
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l 360 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSII 360 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHH
Confidence 35899999999866555566655 5568888899999999999999999888775444322110 0122233334455
Q ss_pred ecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHHH
Q 014518 120 GNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQ 163 (423)
Q Consensus 120 ~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s~ 163 (423)
.+.+.+...++.++..++.=| +++|++-|+..+..+|+..+-+.
T Consensus 361 ~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~ 405 (468)
T TIGR00788 361 AEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGF 405 (468)
T ss_pred HHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHH
Confidence 566777778888888888887 56899999999999999777765
No 159
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=94.04 E-value=0.014 Score=59.71 Aligned_cols=117 Identities=15% Similarity=0.075 Sum_probs=73.4
Q ss_pred hhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHhhheee
Q 014518 41 VIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFV 119 (423)
Q Consensus 41 ~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l 119 (423)
-+++.+|+|..+...+-....+|..+ ++..|.+.|+.+++.++.+|.++. .++.. +.+ . ++.|...+..++
T Consensus 231 ~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~~~-~~~~~--~~~---~--~~~~~~~~~~~~ 302 (393)
T PRK11195 231 WAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGILMG-LVVLL--MAL---Q--HSLLPAYPLLIL 302 (393)
T ss_pred HHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHHHH-HHHHH--HHH---H--hHHHHHHHHHHH
Confidence 35667899999998888878888866 678899999999988877775432 22211 111 1 234445555556
Q ss_pred ecCCceeeehhhhhhhhhcCCCC--CCCeeEeeccccchhhHHHHHHH
Q 014518 120 GNNGETYFNTAALVSCVQNFPKS--RGPVVGILKGFAGLGGAILTQVY 165 (423)
Q Consensus 120 ~g~g~~~~~ta~l~t~~~nFP~~--RG~vvgilk~~~GLSaaI~s~i~ 165 (423)
.|.+.++++........++-|++ ||.+.++.....-++..+-..++
T Consensus 303 ~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~ 350 (393)
T PRK11195 303 IGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLY 350 (393)
T ss_pred HHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHH
Confidence 67777777754444444444553 57777776655545544444443
No 160
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=94.03 E-value=0.0023 Score=65.53 Aligned_cols=123 Identities=17% Similarity=0.122 Sum_probs=75.3
Q ss_pred chhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhh----hh-HHHHHHHHhhhhhcceeeeeeeeCCCCCchHH
Q 014518 38 ISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVL----PI-WGALLVGALQNFIGYGWVWLIVTGRAPVLPLW 111 (423)
Q Consensus 38 yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~----gP-~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~ 111 (423)
..+-+.+.+|++..+..++-.+.-+...+ .++.|.+.||. |+ |+.+++|++...++..+++..-.... ...++
T Consensus 22 l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~-~~~~~ 100 (437)
T TIGR00792 22 LLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSA-TGKLV 100 (437)
T ss_pred HHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCc-chHHH
Confidence 55667889999999999987777777655 88999999985 44 45677888777777776654321111 11233
Q ss_pred HHhhheeeecCCceeeehh--hhhhhhhcCCCCCCCeeEeeccccchhhHHH
Q 014518 112 AMCILIFVGNNGETYFNTA--ALVSCVQNFPKSRGPVVGILKGFAGLGGAIL 161 (423)
Q Consensus 112 ~l~~f~~l~g~g~~~~~ta--~l~t~~~nFP~~RG~vvgilk~~~GLSaaI~ 161 (423)
.+.+...+.+.+.+..++. ++...+.+=|++|+.+.++--.+..+++.+.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~ 152 (437)
T TIGR00792 101 YAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLV 152 (437)
T ss_pred HHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333444555544443 3333333235789988777555444444433
No 161
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=93.91 E-value=0.0086 Score=61.95 Aligned_cols=150 Identities=19% Similarity=0.166 Sum_probs=98.2
Q ss_pred cCcch-hHHHHHHHHhhcccccccccchhhhhhccCcchhHHHhhhhccccccc-cccccchhhhhhhhHHHHHHHHhhh
Q 014518 13 NNRWL-VFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDS-VGFLAGSLCEVLPIWGALLVGALQN 90 (423)
Q Consensus 13 ~~Rw~-~l~a~~~i~l~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~-~g~~~G~l~D~~gP~~vl~iG~~~~ 90 (423)
.+|.+ .++++.+++.+.+..|.|. +.-+++.-+++......+-..+.+... +-+..+++..|+|++.++++|.+..
T Consensus 206 ~~~~~~Fll~~~l~~~~~~~~~~f~--~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~ 283 (400)
T PF03825_consen 206 NPRFLVFLLAAFLIGISHAAYYTFF--SIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAY 283 (400)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHH--HHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 44454 4466667778888888885 555777666766665554333445553 3668999999999999999999987
Q ss_pred hhcceeeeeeeeCCCCCchHHHHh-hh--eeeecCCceeeehhhhhhhhhcCCC-CCCCeeEeecc-ccchhhHHHHHHH
Q 014518 91 FIGYGWVWLIVTGRAPVLPLWAMC-IL--IFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKG-FAGLGGAILTQVY 165 (423)
Q Consensus 91 ~~Gy~~~~l~~~g~i~~~~~~~l~-~f--~~l~g~g~~~~~ta~l~t~~~nFP~-~RG~vvgilk~-~~GLSaaI~s~i~ 165 (423)
.+=+.++...-+ + ..+..+ .. ..+-|..=+.+..+++.=.-++.|+ .|+++.|+.-+ ..|+|+++-+.+.
T Consensus 284 ~vR~~l~a~~~~----~-~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~ig 358 (400)
T PF03825_consen 284 AVRWLLYAYFSD----P-WPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIG 358 (400)
T ss_pred HHHHHHHHHhcC----C-cHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHH
Confidence 766655332111 1 111111 11 1233444446677888888899985 58999999876 4799888866655
Q ss_pred HHhc
Q 014518 166 TMIH 169 (423)
Q Consensus 166 ~~~f 169 (423)
-..+
T Consensus 359 G~l~ 362 (400)
T PF03825_consen 359 GWLY 362 (400)
T ss_pred HHHH
Confidence 4444
No 162
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=93.86 E-value=0.032 Score=58.40 Aligned_cols=122 Identities=18% Similarity=0.229 Sum_probs=84.6
Q ss_pred CcchhHHHhhhhccccccccc-cccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHhhheeeecCCce
Q 014518 47 NYNQKQIARLGVAKDLGDSVG-FLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGET 125 (423)
Q Consensus 47 ~~sq~~l~~i~~a~~vG~~~g-~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~ 125 (423)
+|...-..++.-+.++|..+| ++.|++-|++|+|.+...-.+..-+.-....+......+..-++.+|+|=++.|+|.+
T Consensus 80 ~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIG 159 (538)
T KOG0252|consen 80 HYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIG 159 (538)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhcccc
Confidence 355555666777778998884 6799999999998876666655555444333333333322237788999999999988
Q ss_pred eeehhhhhhhhhcCC--CCCCCeeEeeccccc---hhhHHHHHHHHHhc
Q 014518 126 YFNTAALVSCVQNFP--KSRGPVVGILKGFAG---LGGAILTQVYTMIH 169 (423)
Q Consensus 126 ~~~ta~l~t~~~nFP--~~RG~vvgilk~~~G---LSaaI~s~i~~~~f 169 (423)
. |--.=.|.++-+- ..||+-++.+-++.| |.|+|++.|-.+.|
T Consensus 160 G-DYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~f 207 (538)
T KOG0252|consen 160 G-DYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIF 207 (538)
T ss_pred C-CCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHH
Confidence 5 3334455566664 679999999999988 45777777666655
No 163
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=93.81 E-value=0.0066 Score=62.54 Aligned_cols=135 Identities=15% Similarity=0.009 Sum_probs=69.1
Q ss_pred hhhcCcchhHHHHHHHHhhcccccccccchh-hhhhccCcchhHHHhhhhcccccccc-ccccchhh-hhhhhHH-----
Q 014518 10 SFFNNRWLVFVAAMWIQSCAGIGYLFGSISP-VIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLC-EVLPIWG----- 81 (423)
Q Consensus 10 ~~~~~Rw~~l~a~~~i~l~~Gt~Y~Fs~yS~-~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~-D~~gP~~----- 81 (423)
+..++|.+...+.. ..++....+.|..+.| -+++.+|++..+...+......+..+ +...+.+. |+.++|.
T Consensus 213 ~ll~~~~~~~~~l~-~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~ 291 (413)
T PRK15403 213 NVFRNRLFLTGAAT-LSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAV 291 (413)
T ss_pred HHHcCHHHHHHHHH-HHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHH
Confidence 33455544332222 2334445567777776 45677899999988765433344444 34555544 5555554
Q ss_pred -HHHHHHhhhhhcceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCCCCCCCeeEeecccc
Q 014518 82 -ALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFA 154 (423)
Q Consensus 82 -vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~~RG~vvgilk~~~ 154 (423)
+..+|.++..++..+ .+. +++...+..++.+.|.+.........+....+..+|++.|+.-...
T Consensus 292 ~~~~ig~~l~~~~~~~--------~~~-~~~~~~~~~~l~~~G~~~~~p~~~~~al~~~~~~~G~a~a~~~~~~ 356 (413)
T PRK15403 292 PIQLVGLALLIVGNLL--------WPH-VWLWSVLGTSLYAFGIGLIFPTLFRFTLFSNNLPKGTVSASLNMVI 356 (413)
T ss_pred HHHHHHHHHHHHHHHH--------ccc-cHHHHHHHHHHHHHHHHHHhHHHHHHHhccCCCCCcHHHHHHHHHH
Confidence 334455544444321 111 2222223334445555555444443344444555888888764443
No 164
>PRK10133 L-fucose transporter; Provisional
Probab=93.59 E-value=0.017 Score=60.07 Aligned_cols=111 Identities=12% Similarity=-0.006 Sum_probs=74.2
Q ss_pred hhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHhhheeeec
Q 014518 43 KSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGN 121 (423)
Q Consensus 43 k~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g 121 (423)
++.+|++..+....-....++..+ .+++|.+.||+|+|.++.++.++...+.+...+ ... .. .+ ....+.|
T Consensus 287 ~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~--~~~----~~-~~-~~~~l~g 358 (438)
T PRK10133 287 EEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAF--AGG----HV-GL-IALTLCS 358 (438)
T ss_pred hhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH--cCC----hH-HH-HHHHHHH
Confidence 567899999998865555566655 578999999999999888887765554433221 111 11 11 1223356
Q ss_pred CCceeeehhhhhhhhhcCCCCCCCeeEeeccccchhhHHHH
Q 014518 122 NGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILT 162 (423)
Q Consensus 122 ~g~~~~~ta~l~t~~~nFP~~RG~vvgilk~~~GLSaaI~s 162 (423)
.|.+..+-......++.+|++.|++.+++.. ..+++++..
T Consensus 359 lg~~~i~P~~~s~a~~~~~~~~~~as~l~~~-~~~g~~~~~ 398 (438)
T PRK10133 359 AFMSIQYPTIFSLGIKNLGQDTKYGSSFIVM-TIIGGGIVT 398 (438)
T ss_pred HHHHHHHHHHHHHHHcccchhhccchhHHhH-HhccchHHH
Confidence 7777777778888999999988888887753 224444443
No 165
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=93.55 E-value=0.0082 Score=62.67 Aligned_cols=153 Identities=20% Similarity=0.315 Sum_probs=101.0
Q ss_pred hhhhhhccCcchhHHHhhhhccccccccccccchhhhhhh-----hHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHH
Q 014518 39 SPVIKSSLNYNQKQIARLGVAKDLGDSVGFLAGSLCEVLP-----IWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAM 113 (423)
Q Consensus 39 S~~Lk~~l~~sq~~l~~i~~a~~vG~~~g~~~G~l~D~~g-----P~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l 113 (423)
.+-+|+++|+|.+|++.+....++.-.+-++.|++.|.+| .|+=+++|+++..++...+.+. .+..+ +....
T Consensus 13 ~~~l~~~l~ls~~~~~~~~~~~~lPw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~-~~~~~--s~~~~ 89 (433)
T PF03092_consen 13 YPFLKDDLGLSPAQLQRLSSLASLPWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALL-PASES--SAAIA 89 (433)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHhCchHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhc-ccccc--hhhhH
Confidence 4559999999999999999988888899999999999997 6888888998886555543332 22221 34455
Q ss_pred hhheeeecCCceeeehh---hhhhhhhcCCCCCCCeeEeeccccchhhHHHHHHHHHhc--CCCccceeeeeeechhhhh
Q 014518 114 CILIFVGNNGETYFNTA---ALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIH--APDHANLIFMVAVGPAMVV 188 (423)
Q Consensus 114 ~~f~~l~g~g~~~~~ta---~l~t~~~nFP~~RG~vvgilk~~~GLSaaI~s~i~~~~f--~~~~~~fllfla~~~~~v~ 188 (423)
.++.+++..|..+.|.+ -++-.++.-|..||..+...-...-++ .++++...++. ..+++.-+...+.+|.+..
T Consensus 90 ~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G-~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~ 168 (433)
T PF03092_consen 90 VVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVG-SLVGSLLSGPLLDSFGPQGVFLISAALPLLML 168 (433)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHH-HHHHHHhhhhhhhcCCCeEEehHHHHHHHHHH
Confidence 56667788888888875 477888999988877554433333333 33344334443 2234444444455566555
Q ss_pred hhheeeE
Q 014518 189 IALMFII 195 (423)
Q Consensus 189 ~~~~~fv 195 (423)
+...+..
T Consensus 169 ~~~~~~~ 175 (433)
T PF03092_consen 169 IVALFLL 175 (433)
T ss_pred HHHHHhh
Confidence 4444433
No 166
>TIGR00898 2A0119 cation transport protein.
Probab=93.54 E-value=0.005 Score=64.57 Aligned_cols=95 Identities=16% Similarity=0.110 Sum_probs=62.9
Q ss_pred ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCCC-CCCC
Q 014518 67 GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGP 145 (423)
Q Consensus 67 g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~-~RG~ 145 (423)
.+..|++.||+|+|.++.++.+...++.+++...- ....+......++++.+.+..+.....-..+.||. .||+
T Consensus 372 ~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 446 (505)
T TIGR00898 372 KLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVP-----VDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNL 446 (505)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcC-----CCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhh
Confidence 45688999999999999998888766665544321 11112333333444455554445555566788994 6999
Q ss_pred eeEeeccccchhhHHHHHHHH
Q 014518 146 VVGILKGFAGLGGAILTQVYT 166 (423)
Q Consensus 146 vvgilk~~~GLSaaI~s~i~~ 166 (423)
+.|+.-....+++.+-..+..
T Consensus 447 ~~g~~~~~~~ig~~i~p~i~~ 467 (505)
T TIGR00898 447 GVGVCSTMARVGSIISPFLVY 467 (505)
T ss_pred hHhHHHHHHHHHHHHHhHHHH
Confidence 999988888887766555544
No 167
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=93.49 E-value=0.0096 Score=62.19 Aligned_cols=119 Identities=9% Similarity=-0.066 Sum_probs=71.5
Q ss_pred chhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhh--hhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHh
Q 014518 38 ISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEV--LPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMC 114 (423)
Q Consensus 38 yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~--~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~ 114 (423)
|-+...+.+|+++.+...+.....++..+ .++.|++.|+ .+++....++..+...|...+..... .+.|.+.
T Consensus 263 ~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~-----~~~~~~~ 337 (455)
T TIGR00892 263 FLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALA-----GDYTGLV 337 (455)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHh-----chHHHHH
Confidence 33444345799999988865554555544 5678999997 44555444444343333322222221 1344555
Q ss_pred hheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHH
Q 014518 115 ILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAIL 161 (423)
Q Consensus 115 ~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~ 161 (423)
++.++.|.+.+...........+.+| ++||++.|+......+++++-
T Consensus 338 i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig 385 (455)
T TIGR00892 338 IYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIG 385 (455)
T ss_pred HHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHcc
Confidence 55666666666665555555566776 468999998888877766554
No 168
>PRK11663 regulatory protein UhpC; Provisional
Probab=93.25 E-value=0.0093 Score=61.67 Aligned_cols=123 Identities=12% Similarity=0.028 Sum_probs=63.3
Q ss_pred ccccchhh-hhhccCcchhHHHhhhhcccccccc-ccccchhhhhh--hh-HH---HHHHHHhhhhhcceeeeeeeeCCC
Q 014518 34 LFGSISPV-IKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVL--PI-WG---ALLVGALQNFIGYGWVWLIVTGRA 105 (423)
Q Consensus 34 ~Fs~yS~~-Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~--gP-~~---vl~iG~~~~~~Gy~~~~l~~~g~i 105 (423)
.+..|.|. +++.+|+|..+.+.+.....++..+ .++.|.+.||+ +. +. +..++.+...++... ...
T Consensus 261 ~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~---~~~--- 334 (434)
T PRK11663 261 AINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWL---MPF--- 334 (434)
T ss_pred HHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHH---ccc---
Confidence 34445444 4577899999988866666666655 67899999998 22 22 222232222222211 111
Q ss_pred CCchHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHHHH
Q 014518 106 PVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQV 164 (423)
Q Consensus 106 ~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s~i 164 (423)
.+ ..++.+++..+ |.+.............+.|| ++||+++|+.-.+.-+++++-..+
T Consensus 335 ~~-~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~ 392 (434)
T PRK11663 335 AS-YVMQAACFFTI-GFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYP 392 (434)
T ss_pred cc-HHHHHHHHHHH-HHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhccc
Confidence 11 22222222222 22111111111223457786 689999999876665655554333
No 169
>PRK10091 MFS transport protein AraJ; Provisional
Probab=93.17 E-value=0.0057 Score=61.93 Aligned_cols=59 Identities=12% Similarity=0.132 Sum_probs=47.6
Q ss_pred hhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceee
Q 014518 39 SPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWV 97 (423)
Q Consensus 39 S~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~ 97 (423)
.+.+++.+|++..+...+.....++..+ .++.|++.||+|++..+.++.+...+|+.++
T Consensus 223 ~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~ 282 (382)
T PRK10091 223 KPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLML 282 (382)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHH
Confidence 4567778999999998876666666655 7789999999999999998888877777553
No 170
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=92.92 E-value=0.014 Score=58.23 Aligned_cols=124 Identities=18% Similarity=0.133 Sum_probs=75.1
Q ss_pred hcccccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhh-hhHHHHHHHHhhhhhcceeeeeeeeCCC
Q 014518 28 CAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVL-PIWGALLVGALQNFIGYGWVWLIVTGRA 105 (423)
Q Consensus 28 ~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~-gP~~vl~iG~~~~~~Gy~~~~l~~~g~i 105 (423)
.....|.+..|-|..-+.+|+|.++...+.....++..+ .++.|++.||+ +.|.++.++.++..+|..++...-.
T Consensus 209 ~~~~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 285 (355)
T TIGR00896 209 QSGLYYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPM--- 285 (355)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhh---
Confidence 344455555666666556799999988877777777766 77899999999 4566777777777777654432211
Q ss_pred CCchHHHHhhheeeecCCceeeehhhhhhhh-hcCC-CCCCCeeEeeccccchhhH
Q 014518 106 PVLPLWAMCILIFVGNNGETYFNTAALVSCV-QNFP-KSRGPVVGILKGFAGLGGA 159 (423)
Q Consensus 106 ~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~-~nFP-~~RG~vvgilk~~~GLSaa 159 (423)
...+. +..+.|.|.+........... +..| +++|.+.|+.-+...++++
T Consensus 286 --~~~~~---~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 336 (355)
T TIGR00896 286 --HGLWA---WALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAA 336 (355)
T ss_pred --hHHHH---HHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHH
Confidence 12222 223445666555444333333 3343 4568888876654444433
No 171
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=92.41 E-value=0.027 Score=58.30 Aligned_cols=125 Identities=16% Similarity=0.063 Sum_probs=62.6
Q ss_pred ccccccchhhh-hhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhh---hhhcceeeeeeeeCCCC
Q 014518 32 GYLFGSISPVI-KSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQ---NFIGYGWVWLIVTGRAP 106 (423)
Q Consensus 32 ~Y~Fs~yS~~L-k~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~---~~~Gy~~~~l~~~g~i~ 106 (423)
.|.+..|.|.. ++.+|++..+..++.....++..+ .+..|.+.||++++....++... ..++..++++. ...
T Consensus 267 ~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 343 (438)
T TIGR00712 267 RYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMN---PAG 343 (438)
T ss_pred HHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhc---CCC
Confidence 45565666554 456799988877765555555443 77899999999643211222221 11222222211 111
Q ss_pred CchHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHH
Q 014518 107 VLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAIL 161 (423)
Q Consensus 107 ~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~ 161 (423)
+.|..+...+..|.+.............+.|| ++||++.|+.....-+++.+.
T Consensus 344 --~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~ 397 (438)
T TIGR00712 344 --NPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVA 397 (438)
T ss_pred --chHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhh
Confidence 12222222222222211111111123457888 579999999876544444333
No 172
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=92.38 E-value=0.017 Score=57.38 Aligned_cols=110 Identities=17% Similarity=0.167 Sum_probs=75.5
Q ss_pred ccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHhhheeeecCC
Q 014518 45 SLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNG 123 (423)
Q Consensus 45 ~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g 123 (423)
.+|++.++....-...-.+..+ .+..+.+.||+|++.++.++.+...++..+.+.. .+ ....+.+. +.|.+
T Consensus 172 ~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~-~~---~~~~~~~~----l~g~~ 243 (310)
T TIGR01272 172 ALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALT-HG---YVAMWFVL----ALGLF 243 (310)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc-CC---HHHHHHHH----HHHHH
Confidence 3799988888764444444444 5679999999999999999988888877554432 11 11233222 45677
Q ss_pred ceeeehhhhhhhhhcCCCCCCCeeEeeccccchhhHHHHH
Q 014518 124 ETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQ 163 (423)
Q Consensus 124 ~~~~~ta~l~t~~~nFP~~RG~vvgilk~~~GLSaaI~s~ 163 (423)
.+..+-.......+.+|++.|.+.+++ ..-.+++++.-.
T Consensus 244 ~s~i~P~~~s~a~~~~~~~~~~asai~-~~~~~Gg~i~P~ 282 (310)
T TIGR01272 244 NSIMFPTIFSLALNALGRHTSQGSGIL-CLAIVGGAIVPL 282 (310)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhHHHH-HHHHhcchHHHH
Confidence 777777788888999999888888775 444466666533
No 173
>PRK10429 melibiose:sodium symporter; Provisional
Probab=91.65 E-value=0.0075 Score=63.27 Aligned_cols=76 Identities=16% Similarity=0.041 Sum_probs=43.0
Q ss_pred hHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHhhheeeecCCceeee
Q 014518 51 KQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFN 128 (423)
Q Consensus 51 ~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ 128 (423)
+....+.....++..+ .++.|.+.||+|+|.++.++.++..+|...++.. +..+..+.|.+.+..++.+.+.+..+
T Consensus 266 ~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~l~g~~~~~~~ 342 (473)
T PRK10429 266 DLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLM--GLAAPHNALLIVIAGILLNIGTALFW 342 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHH--hccCchhHHHHHHHHHHHHHHHHHHH
Confidence 3333444333344444 4668999999999999998888766666554322 11111234444445555555555443
No 174
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=91.57 E-value=0.011 Score=64.05 Aligned_cols=152 Identities=15% Similarity=0.174 Sum_probs=99.9
Q ss_pred chhHHHHHHHHhhccccc-cc-ccchhhhhhccCcchh---HHHhhhhcccccccc-ccccchhhhhhh-hHHHHHHHHh
Q 014518 16 WLVFVAAMWIQSCAGIGY-LF-GSISPVIKSSLNYNQK---QIARLGVAKDLGDSV-GFLAGSLCEVLP-IWGALLVGAL 88 (423)
Q Consensus 16 w~~l~a~~~i~l~~Gt~Y-~F-s~yS~~Lk~~l~~sq~---~l~~i~~a~~vG~~~-g~~~G~l~D~~g-P~~vl~iG~~ 88 (423)
.+.+.+...+....|.+| .. .+|..+...-|+-|.. +...++.-.++|..+ +++.|.+.-+.+ -|+.+++|++
T Consensus 309 ~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~ 388 (599)
T PF06609_consen 309 RRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSV 388 (599)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHH
Confidence 345666666777777665 22 2566666666655543 233344444555555 355677776554 4677788887
Q ss_pred hhhhcceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHHHHHHH
Q 014518 89 QNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTM 167 (423)
Q Consensus 89 ~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s~i~~~ 167 (423)
+...+.+.+...-. +.... ...|.+++|.|.++.-.-+++.+.-.-| ++-|+++|++.+.--++|+|.+++|.+
T Consensus 389 ~~ta~~Gama~~~~---~n~~~--~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~ 463 (599)
T PF06609_consen 389 LMTAFCGAMAAVRP---DNKNA--AIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNA 463 (599)
T ss_pred HHHHHHHHHHHccC---CCcch--HHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 77666555443322 22222 2467778899999887666665555556 568999999999999999999999999
Q ss_pred hcCCC
Q 014518 168 IHAPD 172 (423)
Q Consensus 168 ~f~~~ 172 (423)
.|.+.
T Consensus 464 I~~n~ 468 (599)
T PF06609_consen 464 IFTNK 468 (599)
T ss_pred HHHhh
Confidence 98553
No 175
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=91.53 E-value=0.037 Score=57.25 Aligned_cols=119 Identities=18% Similarity=0.256 Sum_probs=79.7
Q ss_pred hhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHhhheeeec
Q 014518 43 KSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGN 121 (423)
Q Consensus 43 k~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g 121 (423)
++.||++|+|+-.++.+.++.+.. ++++|++-||+|+|.++.+|.+...+-... +.+.+ . ...+|. +..+.|
T Consensus 280 ~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~--~~~~~-~-~~~f~i---~gll~g 352 (438)
T COG2270 280 AADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALY--LIFLE-G-ELDFWI---LGLLVG 352 (438)
T ss_pred HHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHH--HHHcc-c-cHHHHH---HHHHHH
Confidence 568999999999999999999966 889999999999999999998875433222 11112 1 224554 444555
Q ss_pred CCceeeehhhhhhhhhcCCCCC-CCeeEeeccccchhhHHHHHHHHHhc
Q 014518 122 NGETYFNTAALVSCVQNFPKSR-GPVVGILKGFAGLGGAILTQVYTMIH 169 (423)
Q Consensus 122 ~g~~~~~ta~l~t~~~nFP~~R-G~vvgilk~~~GLSaaI~s~i~~~~f 169 (423)
...+-....+=.--.|+.|..| |.--|+ -+.+|=.+++++-+--+.+
T Consensus 353 ~s~G~~qA~SRSy~~~lvp~~k~~~fFgl-yaltgra~S~~gp~lv~v~ 400 (438)
T COG2270 353 TSLGGAQASSRSYLARLVPKGKEGRFFGL-YALTGRAASFLGPFLVAVI 400 (438)
T ss_pred HhcchHHHHHHHHHHHhCCCccccceeeh-hhhhhhHHHHHHHHHHHHH
Confidence 6666666677777889998665 444333 2333444555555444444
No 176
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=91.19 E-value=0.038 Score=58.70 Aligned_cols=154 Identities=20% Similarity=0.192 Sum_probs=95.0
Q ss_pred hhcCcchhHHHHHHHHhhcccccccccchhhhhhccCcchh-HHHh--hhhccccccccccccchhhhhhhhHHHHHHHH
Q 014518 11 FFNNRWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQK-QIAR--LGVAKDLGDSVGFLAGSLCEVLPIWGALLVGA 87 (423)
Q Consensus 11 ~~~~Rw~~l~a~~~i~l~~Gt~Y~Fs~yS~~Lk~~l~~sq~-~l~~--i~~a~~vG~~~g~~~G~l~D~~gP~~vl~iG~ 87 (423)
...+|.+.-+.-...|-++|.++. --|++++-+.-+.+-. ...+ ++....++ .++++++.||.|+|+.++.|+
T Consensus 291 ~~~~~~~i~~~l~~fqq~tG~~~~-~~Y~~~if~~~g~~~~~~~~~~~~~~v~~~~---t~~~~~lvd~~gRr~lll~s~ 366 (513)
T KOG0254|consen 291 KVRKRLIIGLLLQLFQQLTGINYV-FYYSTTIFKSAGLKSDTFLASIILGVVNFLG---TLVATYLVDRFGRRKLLLFGA 366 (513)
T ss_pred chHHHHHHHHHHHHHHHHhCCceE-EeehHHHHHhcCCCCchHHHHHHHHHHHHHH---HHHHHHHHHHhccHHHHHHhH
Confidence 345555544444444555776554 4688888887777744 2222 33222222 345589999999999999999
Q ss_pred hhhhhcceeeeeeeeCCCC---------CchHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchh
Q 014518 88 LQNFIGYGWVWLIVTGRAP---------VLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLG 157 (423)
Q Consensus 88 ~~~~~Gy~~~~l~~~g~i~---------~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLS 157 (423)
+...++-.++...+..... -.++..+|+|.. .++.++.-..- +-...-|| +-|+.+.++-.+...+.
T Consensus 367 ~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~f~~g~g~v~w-~~~sEifp~~~r~~~~s~~~~~n~~~ 443 (513)
T KOG0254|consen 367 AGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIF--SFAIGWGPVPW-VIVSEIFPLRLRSKGASLAVAVNWLW 443 (513)
T ss_pred HHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHH--HHhcccccchh-hhhhccCcHhHHhhhHHHHHHHHHHH
Confidence 9888777766555433221 112333344333 33333322111 34556789 56999999999999999
Q ss_pred hHHHHHHHHHhcCC
Q 014518 158 GAILTQVYTMIHAP 171 (423)
Q Consensus 158 aaI~s~i~~~~f~~ 171 (423)
+.+.+..+...-..
T Consensus 444 ~~~v~~~~~~~~~~ 457 (513)
T KOG0254|consen 444 NFLISFFFPFITEA 457 (513)
T ss_pred HHHHHHHHHHHHHh
Confidence 99998887666433
No 177
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=90.14 E-value=0.019 Score=59.13 Aligned_cols=131 Identities=19% Similarity=0.238 Sum_probs=79.1
Q ss_pred cccchhh-hhhccCcchhHHHhhhhccc-cccccccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCch---
Q 014518 35 FGSISPV-IKSSLNYNQKQIARLGVAKD-LGDSVGFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLP--- 109 (423)
Q Consensus 35 Fs~yS~~-Lk~~l~~sq~~l~~i~~a~~-vG~~~g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~--- 109 (423)
||.|=|+ +|++|++|..+-..++..+- +|...=..+|.+.||+|++-+.++--+...++-...-+..++.-..++
T Consensus 237 fs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~ 316 (417)
T COG2223 237 FSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVV 316 (417)
T ss_pred HHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHH
Confidence 3444333 67899999999877665333 333335679999999998766665554444433333223322211112
Q ss_pred -HHHHhhheeeecCCceeeehhhhhhhhhcCCCCCCCeeEeeccccchhhHHHHHHHHHhc
Q 014518 110 -LWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIH 169 (423)
Q Consensus 110 -~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~~RG~vvgilk~~~GLSaaI~s~i~~~~f 169 (423)
++.+.......|.| |-++-+-.-+-||++-|.|.|+.-+.-||+|..+-+..-..+
T Consensus 317 ~~~~~l~l~~~~G~G----nGsvfk~Ip~if~~~~G~v~G~vga~G~lGGf~lp~~~g~~~ 373 (417)
T COG2223 317 FVAVFLALFVFAGLG----NGSVFKMIPVIFPKETGAVTGIVGAIGGLGGFFLPLAFGVSL 373 (417)
T ss_pred HHHHHHHHHHHhccC----cchheeechHHHHhhhhHHHHHHHHhccccccchhHHHHHHH
Confidence 22111122223333 334555666789999999999999999999977766555544
No 178
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=89.23 E-value=0.03 Score=60.07 Aligned_cols=118 Identities=18% Similarity=0.171 Sum_probs=84.9
Q ss_pred hhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHhhheeee
Q 014518 42 IKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVG 120 (423)
Q Consensus 42 Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~ 120 (423)
.|+.+|.+..+...+-.+..+|+.+ ++..+.+-++.++...+.++.+...++...+.+ . ++.|..++..++.
T Consensus 245 a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal-----~--~~~~~~~~~l~l~ 317 (524)
T PF05977_consen 245 ARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLAL-----S--PSFWLALIALFLA 317 (524)
T ss_pred HHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhc-----c--hHHHHHHHHHHHH
Confidence 4678999999999988888899877 677888888888877777777665554444322 2 3577778888888
Q ss_pred cCCceeeehhhhhhhhhcCCC-CCCCeeEeecccc----chhhHHHHHHHH
Q 014518 121 NNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFA----GLGGAILTQVYT 166 (423)
Q Consensus 121 g~g~~~~~ta~l~t~~~nFP~-~RG~vvgilk~~~----GLSaaI~s~i~~ 166 (423)
|.+....++..-....++=|+ .||.+.++....+ -+|+.+.+.+..
T Consensus 318 G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~ 368 (524)
T PF05977_consen 318 GAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLAD 368 (524)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888777666667778896 5999999865433 244555554443
No 179
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=88.99 E-value=0.056 Score=55.61 Aligned_cols=131 Identities=12% Similarity=0.071 Sum_probs=75.8
Q ss_pred hhcccccccccchhhhhhcc--CcchhHHHhhhhcccccccc-ccccchhhhhhhhHH-HHHHHHhhhhhcceeeeeeee
Q 014518 27 SCAGIGYLFGSISPVIKSSL--NYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWG-ALLVGALQNFIGYGWVWLIVT 102 (423)
Q Consensus 27 l~~Gt~Y~Fs~yS~~Lk~~l--~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~-vl~iG~~~~~~Gy~~~~l~~~ 102 (423)
+..+..|.+..|-|.+-+++ ++++.+...+...-.++..+ .+..|.+.||++.|. ...++.++..+++.+. ...
T Consensus 253 ~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~--~~~ 330 (412)
T TIGR02332 253 CLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLA--SAT 330 (412)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHH--Hhc
Confidence 34456777888888888775 66777777777777777766 567999999998554 3444444444443221 111
Q ss_pred CCCCCchHHHHhhheeeecCCceeeehhhhhhh-hhcCC-CCCCCeeEeeccccchhhHHHHHHH
Q 014518 103 GRAPVLPLWAMCILIFVGNNGETYFNTAALVSC-VQNFP-KSRGPVVGILKGFAGLGGAILTQVY 165 (423)
Q Consensus 103 g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~-~~nFP-~~RG~vvgilk~~~GLSaaI~s~i~ 165 (423)
..+.....++.. .+.|... ......++ ...|| ++||++.|+......+++++-..+.
T Consensus 331 ---~~~~~~~~~~~~--~~~g~~~-~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~ 389 (412)
T TIGR02332 331 ---DHNLIQLLGIIM--ASMGSFS-AMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLI 389 (412)
T ss_pred ---CCHHHHHHHHHH--HHHHhhh-hhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhc
Confidence 111222222221 1222211 12222233 34576 5799999999988888877664443
No 180
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=88.94 E-value=0.11 Score=52.76 Aligned_cols=149 Identities=8% Similarity=-0.095 Sum_probs=75.0
Q ss_pred hhhcCcchhHHHHHHHHhhcccccccccchhhhhhccCcchhHHHhhhhccccccccccccchhhhhhhh---HHHHHH-
Q 014518 10 SFFNNRWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSVGFLAGSLCEVLPI---WGALLV- 85 (423)
Q Consensus 10 ~~~~~Rw~~l~a~~~i~l~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~g~~~G~l~D~~gP---~~vl~i- 85 (423)
+..++|.+...+.. .....+..|.+..|-|++-++.|++.+ .........+++.+| .|.+.|+... |.....
T Consensus 187 ~ll~~~~~~~~~~~-~~~~~~~~~~~~~wlp~~L~~~g~s~~-~~~~~~l~~~~g~~g--~~~~~d~~~r~~~r~~~~~~ 262 (368)
T TIGR00903 187 ALAGRKDLWIIGAI-LGFGVALFDNLAIWLEAALRPAGLEDI-AGDAVALAILAGLIG--VAVIPDRVARAGLRSIYIRA 262 (368)
T ss_pred HHHcChhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCCCChH-HHHHHHHHHHHHHHH--HHHhhHHhhhhhhHHHHHHH
Confidence 44455554333322 333455577888888998888888865 333333223333333 3677777643 222221
Q ss_pred HHhhhhhcceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCCC-CCCCeeEeeccccchhhHHHHHH
Q 014518 86 GALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAILTQV 164 (423)
Q Consensus 86 G~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~-~RG~vvgilk~~~GLSaaI~s~i 164 (423)
..++..++...+ .+.+ + +.+.+ .+.++++...............+.||. .||++.|+.-+.--+++.+...+
T Consensus 263 ~~~~~a~~~~~~--~~~~---~-~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~ 335 (368)
T TIGR00903 263 AALLIAAFFLAL--AFEL---N-RLALF-AFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALA 335 (368)
T ss_pred HHHHHHHHHHHH--HHcc---c-cHHHH-HHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHH
Confidence 222222222111 1222 1 12222 222334343333333333345688985 79999999998777776555444
Q ss_pred HHHhc
Q 014518 165 YTMIH 169 (423)
Q Consensus 165 ~~~~f 169 (423)
--.+.
T Consensus 336 ~~~~~ 340 (368)
T TIGR00903 336 AMLFI 340 (368)
T ss_pred HHHHh
Confidence 44443
No 181
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=88.45 E-value=0.012 Score=62.39 Aligned_cols=100 Identities=14% Similarity=0.204 Sum_probs=73.1
Q ss_pred cccccchhhhhhhhHH-------HHHHHHhhhhhcceee-----eeeeeCCCCCchHHHHhhheeeecCCceeeehhhhh
Q 014518 66 VGFLAGSLCEVLPIWG-------ALLVGALQNFIGYGWV-----WLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALV 133 (423)
Q Consensus 66 ~g~~~G~l~D~~gP~~-------vl~iG~~~~~~Gy~~~-----~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~ 133 (423)
++++.|.++||+++|. -+.+|.++..+|+..+ +....+. ..++|.+....++.|.|-.+.....+.
T Consensus 325 ~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~--~~s~~~~i~~~~l~g~Ge~~~~~~g~~ 402 (489)
T PRK10207 325 ASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQG--LTSPWFIVLVYLFQSLGELFISALGLA 402 (489)
T ss_pred HHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC--ccCHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 4667899999999886 3677777766666432 1221111 124555666777788999999999999
Q ss_pred hhhhcCCC-CCCCeeEeeccccchhhHHHHHHHHH
Q 014518 134 SCVQNFPK-SRGPVVGILKGFAGLGGAILTQVYTM 167 (423)
Q Consensus 134 t~~~nFP~-~RG~vvgilk~~~GLSaaI~s~i~~~ 167 (423)
...+.=|. .+|.+.|+.....++|+++=+.+..-
T Consensus 403 ~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~ 437 (489)
T PRK10207 403 MIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATF 437 (489)
T ss_pred HHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999995 58999999998888888887766543
No 182
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=88.40 E-value=0.011 Score=59.89 Aligned_cols=70 Identities=13% Similarity=0.099 Sum_probs=43.5
Q ss_pred hHHHHHHhhhHHHHHHHHHhcCCCCceeecchhhhhhhcCCCCce--eeeehhh-Hhhhhhcccccccceeec
Q 014518 353 TLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTH--IFVSMIS-IWNFLGRVGGGYFSEIIV 422 (423)
Q Consensus 353 t~~q~l~t~dFWllf~~~~~g~G~Gl~~InN~gqI~~alg~~~~~--~~VsL~S-i~n~~GRl~~G~~SD~l~ 422 (423)
++++.+|++.+|......++...+...+..-.....+.+|+++.+ ...++.+ +...+|.+..|.+.||+.
T Consensus 200 ~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g 272 (390)
T TIGR02718 200 SLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAG 272 (390)
T ss_pred HHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhh
Confidence 456788888888777666655433222222233444556776654 3445554 466788999999999864
No 183
>PRK09669 putative symporter YagG; Provisional
Probab=87.83 E-value=0.037 Score=57.36 Aligned_cols=106 Identities=18% Similarity=0.166 Sum_probs=54.0
Q ss_pred hhhccccccccc-cccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehh--hh
Q 014518 56 LGVAKDLGDSVG-FLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTA--AL 132 (423)
Q Consensus 56 i~~a~~vG~~~g-~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta--~l 132 (423)
+.....+...++ ++++.+.||+|+|.++.++.+...++...+++. . ..+.|.+.+..++.|.|.+..... ++
T Consensus 269 ~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~i~g~~~~~~~~~~~am 343 (444)
T PRK09669 269 FLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFI--P---PSNVWLIFALNILFNFIQNLTTPLQWSM 343 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHh--C---cchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333444443 468899999999999988877655433322221 1 123444444445555655543321 22
Q ss_pred hhhhhcC-CCC-----CCCeeEee----ccccchhhHHHHHHHH
Q 014518 133 VSCVQNF-PKS-----RGPVVGIL----KGFAGLGGAILTQVYT 166 (423)
Q Consensus 133 ~t~~~nF-P~~-----RG~vvgil----k~~~GLSaaI~s~i~~ 166 (423)
.+-+-.+ +.+ .|...|+. |-..++++.+.+.+..
T Consensus 344 ~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~ 387 (444)
T PRK09669 344 FSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILA 387 (444)
T ss_pred HHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2211111 111 23333432 5666677777766644
No 184
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=87.78 E-value=0.24 Score=52.56 Aligned_cols=133 Identities=15% Similarity=0.173 Sum_probs=84.8
Q ss_pred HhhhhcCcchhHHHHHHHHhhcccccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhH--HHHH
Q 014518 8 FVSFFNNRWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIW--GALL 84 (423)
Q Consensus 8 ~~~~~~~Rw~~l~a~~~i~l~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~--~vl~ 84 (423)
.|+..+.|-+......+.....|.+=..+...--.++.+|++++|+..+....++.+.+ .+..|++.||+||| .++.
T Consensus 274 ~k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~ 353 (477)
T PF11700_consen 274 FKEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLL 353 (477)
T ss_pred HHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHH
Confidence 34444455333333333333344443344444445678999999999999988888877 67899999999999 5655
Q ss_pred HHHhh----hhhcceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCCCCC
Q 014518 85 VGALQ----NFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSR 143 (423)
Q Consensus 85 iG~~~----~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~~R 143 (423)
++.+. ...|++.++....|.- +-|.+.++.++.|...+..+.++=..-.+-=|..|
T Consensus 354 ~~l~~~~~i~~~g~~G~~~~~~g~~---~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~ 413 (477)
T PF11700_consen 354 ISLILWIIIPLYGLFGFWPSFFGLK---SPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGR 413 (477)
T ss_pred HHHHHHHHHHHHHHHHhhhcccCcc---cHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCch
Confidence 55533 3456665555533322 45667777778888787777766655556557644
No 185
>PF13347 MFS_2: MFS/sugar transport protein
Probab=87.54 E-value=0.044 Score=56.46 Aligned_cols=151 Identities=20% Similarity=0.282 Sum_probs=87.7
Q ss_pred hhHhhhhcCc-chhHHHHHHHH-hhcccccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHH
Q 014518 6 ERFVSFFNNR-WLVFVAAMWIQ-SCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGA 82 (423)
Q Consensus 6 ~~~~~~~~~R-w~~l~a~~~i~-l~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~v 82 (423)
+..++..++| |..+..+.+.+ ++.+..-.+..| -.+..++.+ ...+.+.....++..+ .++.+.+.||+|+|.+
T Consensus 216 ~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y--~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~ 292 (428)
T PF13347_consen 216 DSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPY--YFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKV 292 (428)
T ss_pred cchhhhcccchHHHHHHHHHHHHhhhhhhhhHHHH--HHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceee
Confidence 3345555454 55555555543 333332222222 334445555 3445566666677655 5679999999999999
Q ss_pred HHHHHhhhhhcceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehh--hhhhhhhcC------CCCCCCeeEe----e
Q 014518 83 LLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTA--ALVSCVQNF------PKSRGPVVGI----L 150 (423)
Q Consensus 83 l~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta--~l~t~~~nF------P~~RG~vvgi----l 150 (423)
..+|.+...+++.++|..-. .+.|.+.+..++.|.|.+..++. ++.+-+-.+ .++.|...|+ .
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~ 367 (428)
T PF13347_consen 293 YIIGLLLAALGFLLLFFLGP-----GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFI 367 (428)
T ss_pred hhhhHHHHHHHHHHHHHHHh-----hhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhh
Confidence 99999998888887666544 24567777777777777654422 222222211 1223544443 4
Q ss_pred ccccchhhHHHHHH
Q 014518 151 KGFAGLGGAILTQV 164 (423)
Q Consensus 151 k~~~GLSaaI~s~i 164 (423)
|-..|+++.+.+.+
T Consensus 368 k~~~~la~~i~g~~ 381 (428)
T PF13347_consen 368 KIGQGLAGAIVGLL 381 (428)
T ss_pred HHHHHHHHHHHHHH
Confidence 55566666666544
No 186
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=87.21 E-value=0.058 Score=55.64 Aligned_cols=135 Identities=16% Similarity=0.099 Sum_probs=92.5
Q ss_pred HhhcccccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCC
Q 014518 26 QSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGR 104 (423)
Q Consensus 26 ~l~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~ 104 (423)
..++|.-=.|+..+|-|++..|+|.++++.+=...-+|..+ .+.+|++.|| +++..+.....+..+-+.. +.+.+.
T Consensus 222 l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~--l~~~~~ 298 (394)
T COG2814 222 LFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLA--LTFTGA 298 (394)
T ss_pred HHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHH--HHHhcc
Confidence 34455555677799999999999999999966666666666 4579999999 8888888776665555544 333332
Q ss_pred CCCchHHHHhhheeeecCCceeeehhhhhhhhhcCCCCCCCeeEeecccc----chhhHHHHHHHHH
Q 014518 105 APVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFA----GLGGAILTQVYTM 167 (423)
Q Consensus 105 i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~~RG~vvgilk~~~----GLSaaI~s~i~~~ 167 (423)
. .|......++.|++.+..-..-.+-..+--|++++.+.++-.+.+ ++++.+=..++..
T Consensus 299 ~----~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~ 361 (394)
T COG2814 299 S----PALALALLFLWGFAFSPALQGLQTRLARLAPDAADLAGSLNVAAFNLGIALGAALGGLVLDA 361 (394)
T ss_pred h----HHHHHHHHHHHHHHhhhhhhHHHHHhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2 233333333455555555556666777766999999988877654 5666666666655
No 187
>PRK09848 glucuronide transporter; Provisional
Probab=86.75 E-value=0.011 Score=61.28 Aligned_cols=112 Identities=13% Similarity=0.052 Sum_probs=63.5
Q ss_pred hhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHH-----HHHHHHhhhhhcceeeeeeeeCCCCCchHHH
Q 014518 39 SPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWG-----ALLVGALQNFIGYGWVWLIVTGRAPVLPLWA 112 (423)
Q Consensus 39 S~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~-----vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~ 112 (423)
..-+++.+|++..+..++....-+...+ .++.|.+.||.++|+ .+++|++...+...+++..-.+......++.
T Consensus 32 ~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (448)
T PRK09848 32 LSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVY 111 (448)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHH
Confidence 3468888999999999977766666654 888999999985532 5566666544333332222212111112222
Q ss_pred HhhheeeecCCceeeehh--hhhhhhhcCCCCCCCeeEee
Q 014518 113 MCILIFVGNNGETYFNTA--ALVSCVQNFPKSRGPVVGIL 150 (423)
Q Consensus 113 l~~f~~l~g~g~~~~~ta--~l~t~~~nFP~~RG~vvgil 150 (423)
.+....+.+.+.+..+++ ++...+..=|++|....++-
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r 151 (448)
T PRK09848 112 AYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAAR 151 (448)
T ss_pred HHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHH
Confidence 233333344445544432 34455555577887654443
No 188
>PRK09669 putative symporter YagG; Provisional
Probab=86.72 E-value=0.086 Score=54.59 Aligned_cols=120 Identities=16% Similarity=0.086 Sum_probs=65.7
Q ss_pred hhhccCcchhHHHhhhhcccccc-ccccccchhhhhhh----h-HHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHhh
Q 014518 42 IKSSLNYNQKQIARLGVAKDLGD-SVGFLAGSLCEVLP----I-WGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCI 115 (423)
Q Consensus 42 Lk~~l~~sq~~l~~i~~a~~vG~-~~g~~~G~l~D~~g----P-~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~ 115 (423)
+.+.+|+|..+..++-...-+-. ..-++.|.+.||.+ + |+.+++|++...+...++|..-........+|.+..
T Consensus 36 ~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~ 115 (444)
T PRK09669 36 YTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVT 115 (444)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHH
Confidence 56779999999999655555444 55889999999954 3 466666766655555444332211011111333333
Q ss_pred heeeecCCceeee--hhhhhhhhhcCCCCCCCeeEeeccccchhhHHHH
Q 014518 116 LIFVGNNGETYFN--TAALVSCVQNFPKSRGPVVGILKGFAGLGGAILT 162 (423)
Q Consensus 116 f~~l~g~g~~~~~--ta~l~t~~~nFP~~RG~vvgilk~~~GLSaaI~s 162 (423)
+... +.+.+..+ -.++.+.+..=|++|+...+.-..+..+++.+.+
T Consensus 116 ~~l~-~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~ 163 (444)
T PRK09669 116 YILL-SLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVS 163 (444)
T ss_pred HHHH-HHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3322 22222222 2245555555567888766555444444444433
No 189
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=86.47 E-value=0.041 Score=56.36 Aligned_cols=112 Identities=14% Similarity=0.084 Sum_probs=58.4
Q ss_pred hhhccCcchhHHHhhhhcccccc-ccccccchhh-hhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHhhheee
Q 014518 42 IKSSLNYNQKQIARLGVAKDLGD-SVGFLAGSLC-EVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFV 119 (423)
Q Consensus 42 Lk~~l~~sq~~l~~i~~a~~vG~-~~g~~~G~l~-D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l 119 (423)
+++..+ +..+...+-....++. ....+.+.+. ||++++..+.++.+...+++.++. +.+ +.+.+.+..++
T Consensus 235 ~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~--~~~-----~~~~~~~~~~l 306 (400)
T PRK11646 235 VNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIG--MVS-----NLQQLFTLICL 306 (400)
T ss_pred HHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHH--Hhh-----hHHHHHHHHHH
Confidence 445444 5556555433222333 2344445555 456777677777777666665432 111 12222223333
Q ss_pred ecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHH
Q 014518 120 GNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAIL 161 (423)
Q Consensus 120 ~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~ 161 (423)
.+.|....+........+..| ++||++.|+.-...++++++=
T Consensus 307 ~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig 349 (400)
T PRK11646 307 FYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIG 349 (400)
T ss_pred HHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhc
Confidence 344444333333334446667 689999998877666655443
No 190
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=85.76 E-value=0.066 Score=56.77 Aligned_cols=137 Identities=9% Similarity=0.053 Sum_probs=82.8
Q ss_pred hhcccccccccchhh---hhhccCcchhHHHhhhhcccccc-ccccccchhhh----hhhhHHHHHHH-Hhhhhhcceee
Q 014518 27 SCAGIGYLFGSISPV---IKSSLNYNQKQIARLGVAKDLGD-SVGFLAGSLCE----VLPIWGALLVG-ALQNFIGYGWV 97 (423)
Q Consensus 27 l~~Gt~Y~Fs~yS~~---Lk~~l~~sq~~l~~i~~a~~vG~-~~g~~~G~l~D----~~gP~~vl~iG-~~~~~~Gy~~~ 97 (423)
.+.|..+.|++..+. .-+.+|++..+...+-.++.+.. .+.++.|.+.| |+|+|.+++++ ++...+++.++
T Consensus 12 ~~~Giq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll 91 (477)
T TIGR01301 12 VAAGVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILI 91 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHH
Confidence 344556666554433 44678999999999766666655 44778999999 49998887774 66666666655
Q ss_pred eeeee------CCCCC--ch--HHHHhhheeeecCCceeeehhhhhhhhhcCCCC-C--CCeeEeeccccchhhHHHHH
Q 014518 98 WLIVT------GRAPV--LP--LWAMCILIFVGNNGETYFNTAALVSCVQNFPKS-R--GPVVGILKGFAGLGGAILTQ 163 (423)
Q Consensus 98 ~l~~~------g~i~~--~~--~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~~-R--G~vvgilk~~~GLSaaI~s~ 163 (423)
+.+-+ .+.+. .+ .+...+...+...+......++-.-....+|++ | +.+-++.-.+.++|+.+-..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~ 170 (477)
T TIGR01301 92 GFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYA 170 (477)
T ss_pred HhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 43211 01100 01 122233333344455555556666677888853 3 67888777777777665544
No 191
>PRK10054 putative transporter; Provisional
Probab=85.47 E-value=0.17 Score=51.72 Aligned_cols=98 Identities=16% Similarity=0.142 Sum_probs=57.0
Q ss_pred ccCcchhHHHh-hhhccccccccccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHhhheeeecCC
Q 014518 45 SLNYNQKQIAR-LGVAKDLGDSVGFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNG 123 (423)
Q Consensus 45 ~l~~sq~~l~~-i~~a~~vG~~~g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g 123 (423)
+.+.++..... ++..........++.|.+.||+++|.++.+|.+...+|+..+... . + ++|.+.+...+.+.|
T Consensus 238 ~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~----~-~~~~~~~~~~~~~~g 311 (395)
T PRK10054 238 DSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFS-G----N-SLLLWGMSAAVFTVG 311 (395)
T ss_pred ccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHc-c----h-HHHHHHHHHHHHHHH
Confidence 45566666554 333222323446788999999999999999988888888664322 1 1 344444444555555
Q ss_pred ceeeehhhhhhhhhcC-C-CCCCCeeEe
Q 014518 124 ETYFNTAALVSCVQNF-P-KSRGPVVGI 149 (423)
Q Consensus 124 ~~~~~ta~l~t~~~nF-P-~~RG~vvgi 149 (423)
.+.... +..+.+.+. | +.||+..|.
T Consensus 312 ~~~~~p-~~~~~~~~~~p~~~~~~~~~~ 338 (395)
T PRK10054 312 EIIYAP-GEYMLIDHIAPPGMKASYFSA 338 (395)
T ss_pred HHHHHh-hHHHHHHHhCCcccceehHhH
Confidence 433221 223344444 5 568887664
No 192
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=85.09 E-value=0.13 Score=52.27 Aligned_cols=85 Identities=19% Similarity=0.104 Sum_probs=63.8
Q ss_pred cccccccchhhhhhccCcchhHHHhhhhcccccc-ccccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCch
Q 014518 31 IGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGD-SVGFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLP 109 (423)
Q Consensus 31 t~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~-~~g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~ 109 (423)
..|.|.+|+ +||++..|++.+=.++-+-. .+|.+.|.+.|++|+|..+++-+++..+..+. .+. +.
T Consensus 54 GpY~Y~LY~-----~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~------k~~--~~ 120 (354)
T PF05631_consen 54 GPYLYALYE-----SYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLT------KHS--SN 120 (354)
T ss_pred cchhHHHHH-----HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH------Hhc--cc
Confidence 579998883 59999999999777777666 55999999999999999999999987766543 333 24
Q ss_pred HHHHhhheeeecCCceeee
Q 014518 110 LWAMCILIFVGNNGETYFN 128 (423)
Q Consensus 110 ~~~l~~f~~l~g~g~~~~~ 128 (423)
++.+.+=-+++|.+.+...
T Consensus 121 ~~~L~~GRvlgGiaTSLLf 139 (354)
T PF05631_consen 121 YPVLLLGRVLGGIATSLLF 139 (354)
T ss_pred cHHHHHHHHHHHHHHHHHH
Confidence 5556655566666665433
No 193
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=82.55 E-value=0.11 Score=55.47 Aligned_cols=143 Identities=22% Similarity=0.128 Sum_probs=87.2
Q ss_pred HHHHHhhcccccccccchhhhhhc-cCcchhHHHhhhhcccccccc-ccccchhhhh----hhhHHHHHHHHhh-hhhcc
Q 014518 22 AMWIQSCAGIGYLFGSISPVIKSS-LNYNQKQIARLGVAKDLGDSV-GFLAGSLCEV----LPIWGALLVGALQ-NFIGY 94 (423)
Q Consensus 22 ~~~i~l~~Gt~Y~Fs~yS~~Lk~~-l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~----~gP~~vl~iG~~~-~~~Gy 94 (423)
++.--.+-..+|.|+-|.|.+-+. .|+|..+.+.+++..++|+.+ ++.+|.+.|| ...|..+.+...+ ...|+
T Consensus 279 ~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~ 358 (495)
T KOG2533|consen 279 SLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGA 358 (495)
T ss_pred HHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 334444556789999999988777 679999999999999999988 6679999999 6666665555443 44664
Q ss_pred eeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCC--CCCCCeeEeeccccchhhHHHHHHHHHhcCC
Q 014518 95 GWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP--KSRGPVVGILKGFAGLGGAILTQVYTMIHAP 171 (423)
Q Consensus 95 ~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP--~~RG~vvgilk~~~GLSaaI~s~i~~~~f~~ 171 (423)
..+... . . . +.....+++...+++. ....+..-+-.|-. .+|=++++......|.++++-.|++.+.-.|
T Consensus 359 ~~l~~~--~-~-~-~~~~~~~~~~~~~~~~--~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap 430 (495)
T KOG2533|consen 359 ISLLAA--A-V-L-PGAYGAFLIGPYGLIA--TAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAP 430 (495)
T ss_pred HHHHhh--c-c-c-hHHhHHHHhcchhhHH--HHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCc
Confidence 443222 1 1 1 1111112222222222 22233333334443 2344556666677788888888877665444
No 194
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=82.54 E-value=0.62 Score=49.30 Aligned_cols=149 Identities=15% Similarity=0.210 Sum_probs=82.7
Q ss_pred hhhhccCcchhHHHh-hhhccccccccccccchhhhhh-hhHHHHHHHHhhhhhcceeeeeee-eCCCCCchHHHHhhhe
Q 014518 41 VIKSSLNYNQKQIAR-LGVAKDLGDSVGFLAGSLCEVL-PIWGALLVGALQNFIGYGWVWLIV-TGRAPVLPLWAMCILI 117 (423)
Q Consensus 41 ~Lk~~l~~sq~~l~~-i~~a~~vG~~~g~~~G~l~D~~-gP~~vl~iG~~~~~~Gy~~~~l~~-~g~i~~~~~~~l~~f~ 117 (423)
++++-+|+||++-.. .+..+..-=..-+++|++.||+ |.|.++++|++...+|+..+...= .|.. .+ -+.+..
T Consensus 51 ~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~---gl-~i~L~~ 126 (498)
T COG3104 51 QLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPG---GL-YIGLAL 126 (498)
T ss_pred hccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhcccccccc---HH-HHHHHH
Confidence 344447799999876 4443333323377899999996 999999999999999999876653 3322 12 122222
Q ss_pred eeecCCceeeehhhhhhhhhcCCC--CCCCeeEeeccccc--hhhHHHHHHHHHhcCCCccc-eeeeeeechhhhhhhhe
Q 014518 118 FVGNNGETYFNTAALVSCVQNFPK--SRGPVVGILKGFAG--LGGAILTQVYTMIHAPDHAN-LIFMVAVGPAMVVIALM 192 (423)
Q Consensus 118 ~l~g~g~~~~~ta~l~t~~~nFP~--~RG~vvgilk~~~G--LSaaI~s~i~~~~f~~~~~~-fllfla~~~~~v~~~~~ 192 (423)
. +.|.+.+=...-.-.-+-+|. .| .-.|...=|.| ++ ++++-+-......+... .-+-++.+....+++..
T Consensus 127 I--~iG~Gl~K~NiS~llg~ly~~~Dpr-rD~gFt~fY~~iNiG-sl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f 202 (498)
T COG3104 127 I--IVGTGLFKPNISSLLGELYPKDDPR-RDGGFTLFYMGINIG-SLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIF 202 (498)
T ss_pred H--HhccccccccHHHHHHHhcCCCCcc-cCCCccEEEEEeehH-HHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHH
Confidence 2 245554433333333455752 34 44454444444 23 34444444444333331 22223334555666666
Q ss_pred eeEec
Q 014518 193 FIIRP 197 (423)
Q Consensus 193 ~fvr~ 197 (423)
+..|.
T Consensus 203 ~~~~r 207 (498)
T COG3104 203 LLGRR 207 (498)
T ss_pred HHccc
Confidence 66663
No 195
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=81.95 E-value=0.1 Score=55.25 Aligned_cols=144 Identities=13% Similarity=0.090 Sum_probs=90.7
Q ss_pred HHHhhcccccccccchhhhhhccCcchhHHHhhhhcccccc-ccccccchhhhhhhhHHHHHHHHhhhhhcceee--eee
Q 014518 24 WIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGD-SVGFLAGSLCEVLPIWGALLVGALQNFIGYGWV--WLI 100 (423)
Q Consensus 24 ~i~l~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~-~~g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~--~l~ 100 (423)
..|..+|. ++=..||-.+=++-|+++.+.....++..+-. .+.+.+.++.||.|+|+.++++..++.+--..+ .+.
T Consensus 279 ~~qq~sGi-~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~ 357 (485)
T KOG0569|consen 279 FAQQFSGI-NAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALF 357 (485)
T ss_pred HHHHhcCc-ceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444443 44567999999999999997777666544444 347889999999999999999988866543332 222
Q ss_pred eeCCCC-CchH-HHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhhHHHHHHHHHhc
Q 014518 101 VTGRAP-VLPL-WAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGGAILTQVYTMIH 169 (423)
Q Consensus 101 ~~g~i~-~~~~-~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSaaI~s~i~~~~f 169 (423)
...... -.++ ...|++..+..++.+..-.+ .--...=|| ..|.++........-++..+....|.-..
T Consensus 358 l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~-~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~ 428 (485)
T KOG0569|consen 358 LSNSFGSWLSYLCIAAIFLFIISFAIGPGPIP-WFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQ 428 (485)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHhhhcCCCchh-HHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222221 1111 11233333333333322222 223346676 68999999998888888888887776654
No 196
>PF13347 MFS_2: MFS/sugar transport protein
Probab=81.71 E-value=0.093 Score=54.07 Aligned_cols=158 Identities=13% Similarity=0.156 Sum_probs=94.9
Q ss_pred hhhhhhccCcchhHHHhhhh-ccccccccccccchhhh----hhhh-HHHHHHHHhhhhhcceeeeeeee-CCCC-CchH
Q 014518 39 SPVIKSSLNYNQKQIARLGV-AKDLGDSVGFLAGSLCE----VLPI-WGALLVGALQNFIGYGWVWLIVT-GRAP-VLPL 110 (423)
Q Consensus 39 S~~Lk~~l~~sq~~l~~i~~-a~~vG~~~g~~~G~l~D----~~gP-~~vl~iG~~~~~~Gy~~~~l~~~-g~i~-~~~~ 110 (423)
.+-+.+.++++.....++-. ..-++...-++.|.+.| |+|+ |+-+++|++...+++.++|...- +.-. ..-+
T Consensus 25 ~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~ 104 (428)
T PF13347_consen 25 LYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLV 104 (428)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHH
Confidence 44456778999999988544 34444455889999999 6785 56667899999999999886622 2221 1124
Q ss_pred HHHhhheeeecCCceeeehh--hhhhhhhcCCCCCCCeeEeeccccchhhHHHHHHHHHhc---CCC-cc-ceeeeeee-
Q 014518 111 WAMCILIFVGNNGETYFNTA--ALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMIH---APD-HA-NLIFMVAV- 182 (423)
Q Consensus 111 ~~l~~f~~l~g~g~~~~~ta--~l~t~~~nFP~~RG~vvgilk~~~GLSaaI~s~i~~~~f---~~~-~~-~fllfla~- 182 (423)
|.+..+.++ ..+-++.++. ++...+.+=|++|....+.-..+..+++.+.+.+...+. +++ .. +|.....+
T Consensus 105 ~~~~~~~l~-~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~ 183 (428)
T PF13347_consen 105 WLFVFYILF-DIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVL 183 (428)
T ss_pred HHHHHHHHH-HHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHH
Confidence 444444433 5666666653 344444444568998888877776666655555544433 433 32 45444333
Q ss_pred --chhhhhhhheeeEec
Q 014518 183 --GPAMVVIALMFIIRP 197 (423)
Q Consensus 183 --~~~~v~~~~~~fvr~ 197 (423)
+..+..+++...+|.
T Consensus 184 ~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 184 AIVGLVFFLITFFFVKE 200 (428)
T ss_pred HHHHHHHhhhhhheeee
Confidence 233334444555555
No 197
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=80.20 E-value=0.56 Score=49.39 Aligned_cols=141 Identities=16% Similarity=0.159 Sum_probs=85.4
Q ss_pred hhhhHhhhhcCcchhHHHHHHHHhhcccccccccchhhhhhccCcchhHHHh-----hhhccc----ccccccc-ccchh
Q 014518 4 FQERFVSFFNNRWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIAR-----LGVAKD----LGDSVGF-LAGSL 73 (423)
Q Consensus 4 ~~~~~~~~~~~Rw~~l~a~~~i~l~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~-----i~~a~~----vG~~~g~-~~G~l 73 (423)
|.+...++.-+| +.-.++.|..+-. ..|.+++++..+-+..++...+-+. ++.... .+..-|. +...+
T Consensus 294 F~~~f~~~hg~~-Llgt~~~WFllDi-afy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~ 371 (538)
T KOG0252|consen 294 FSRLFLRWHGKH-LLGTAGTWFLLDI-AFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYF 371 (538)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHhhhh-hhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEE
Confidence 444444442233 3334555555444 3599999999998877765544333 222211 1212133 57789
Q ss_pred hhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCC-CchHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEe
Q 014518 74 CEVLPIWGALLVGALQNFIGYGWVWLIVTGRAP-VLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGI 149 (423)
Q Consensus 74 ~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~-~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgi 149 (423)
.|+.|++++.+.|-++..+=++.+.-.+++.+. .+-+....+..+++++|= ++.+.+--.++|| +-||+.=||
T Consensus 372 id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGP---n~ttfivpaE~FParvR~t~hGI 446 (538)
T KOG0252|consen 372 IDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGP---NATTFIVPAEIFPARVRSTCHGI 446 (538)
T ss_pred eehhhhHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCC---CceeEEeehhhchHHHhhhhhhH
Confidence 999999999999988877777766667775442 223444555555555554 3345667789999 469976554
No 198
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=76.09 E-value=0.61 Score=48.05 Aligned_cols=119 Identities=18% Similarity=0.146 Sum_probs=72.4
Q ss_pred cccccccccch-hhhhhccCcchhHHHhhhhcccccccccc-------ccchhhhhhhhHHHHHHHHhhhhhcceeeeee
Q 014518 29 AGIGYLFGSIS-PVIKSSLNYNQKQIARLGVAKDLGDSVGF-------LAGSLCEVLPIWGALLVGALQNFIGYGWVWLI 100 (423)
Q Consensus 29 ~Gt~Y~Fs~yS-~~Lk~~l~~sq~~l~~i~~a~~vG~~~g~-------~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~ 100 (423)
.+.-|.|..+- ..+....+=.++ +..-.+|-+|..|++ .+|.+.|++|+|+++++|.+...+ +..+|.+
T Consensus 41 ~~~L~~~~~~~V~~F~~a~~~~~~--~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~-s~ll~~~ 117 (451)
T KOG2615|consen 41 VSSLYPFVVFMVRDFNIAIGEPDG--ASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVAL-SYLLWAL 117 (451)
T ss_pred ccchhHHHHHhhHHHHHhhCCccc--ccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHH-HHHHHHH
Confidence 36666665542 123333333333 344556678887776 599999999999999999999888 4444443
Q ss_pred eeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhh-cC-CCCCCCeeEeeccccchhh
Q 014518 101 VTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQ-NF-PKSRGPVVGILKGFAGLGG 158 (423)
Q Consensus 101 ~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~-nF-P~~RG~vvgilk~~~GLSa 158 (423)
-+. +..+.+-=+++|...+ |...+.+.+. -+ |++|+.+.+.+-..+|++-
T Consensus 118 S~~------F~afv~aR~l~Gi~kg--nl~v~rAiisdV~sek~r~l~ms~v~~a~~lGf 169 (451)
T KOG2615|consen 118 SRN------FAAFVLARFLGGIFKG--NLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGF 169 (451)
T ss_pred HHH------HHHHHHHHHhhhhccC--chHHHHHHHHhhcChhhccceeeeeehhhhcch
Confidence 222 2111111234444443 2233333333 34 5789999999999999973
No 199
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=74.79 E-value=0.87 Score=46.93 Aligned_cols=163 Identities=16% Similarity=0.100 Sum_probs=110.7
Q ss_pred hHHHHHHHHhhcccccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhh-hcce
Q 014518 18 VFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNF-IGYG 95 (423)
Q Consensus 18 ~l~a~~~i~l~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~-~Gy~ 95 (423)
-.+++.--+..++-.-.=|..+|++.+..+.+..|...++..-+.|..+ ...+|++.|+.|.|+-+.+-....+ .||+
T Consensus 80 ~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~i 159 (528)
T KOG0253|consen 80 FFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVI 159 (528)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHh
Confidence 3444554455555566668899999999999999999999999999988 6789999999999987766655533 2222
Q ss_pred eeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcC-CC-CCCCeeEeeccccchhhHHHHHHHHHhcCCCc
Q 014518 96 WVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNF-PK-SRGPVVGILKGFAGLGGAILTQVYTMIHAPDH 173 (423)
Q Consensus 96 ~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nF-P~-~RG~vvgilk~~~GLSaaI~s~i~~~~f~~~~ 173 (423)
+| .+|++..+|+|-++-++|-+- .-...+----| |. +|++-+-.. ++.-.+..+-..+....-+.-.
T Consensus 160 ------s~--~spnf~~L~~f~~l~~~g~gg--~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~g 228 (528)
T KOG0253|consen 160 ------SG--ASPNFASLCVFRALWGFGVGG--LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFG 228 (528)
T ss_pred ------hc--CCCCeehhhHHHHHHhccCCC--ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhh
Confidence 22 245676789999888888776 23444444455 74 677655444 6666666655555444434445
Q ss_pred cceeeeeeechhhhhhhh
Q 014518 174 ANLIFMVAVGPAMVVIAL 191 (423)
Q Consensus 174 ~~fllfla~~~~~v~~~~ 191 (423)
-.+++|+..+|.....+.
T Consensus 229 wr~~l~~~~~pl~~~a~f 246 (528)
T KOG0253|consen 229 WRYLLFTSSTPLMFAARF 246 (528)
T ss_pred HHHHHHHHHhHHHHHHHH
Confidence 567777776666544333
No 200
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=73.92 E-value=0.85 Score=46.63 Aligned_cols=125 Identities=17% Similarity=0.110 Sum_probs=92.9
Q ss_pred cccchhhhhhccCcchhHHHhhhhcccccc-ccccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCC-chHHH
Q 014518 35 FGSISPVIKSSLNYNQKQIARLGVAKDLGD-SVGFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPV-LPLWA 112 (423)
Q Consensus 35 Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~-~~g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~-~~~~~ 112 (423)
.+--=+++++.+|+|-++...+++.=-+-- .++++...+.-|+|++..+..+.++..+|-.+ ++ .+.+.
T Consensus 31 vgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~i---------R~~~~~~~ 101 (395)
T COG2807 31 VGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILI---------RSLGGLPL 101 (395)
T ss_pred hhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHH---------HhcccHHH
Confidence 444456888899999999999887555544 55778999999999999999999999888775 21 13455
Q ss_pred HhhheeeecCCceeeehhhhhhhhhcCCCCCCCeeEeeccccchhhHHHHHHHHHh
Q 014518 113 MCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQVYTMI 168 (423)
Q Consensus 113 l~~f~~l~g~g~~~~~ta~l~t~~~nFP~~RG~vvgilk~~~GLSaaI~s~i~~~~ 168 (423)
+..=..++|.|.+..|.=-=--.=|+||++-|.++|+-..-.+.++++-+.+..-+
T Consensus 102 L~~gt~l~G~gIav~nVLLPslIK~~Fpk~~~~mtglYs~sl~~~aaLaa~lavpl 157 (395)
T COG2807 102 LFLGTLLAGAGIAVINVLLPSLIKRDFPKRVGLMTGLYSTSLGAGAALAAALAVPL 157 (395)
T ss_pred HHHHHHHHHhhHHHHHHhhhHHHHhhcccchhhHHhHHHHHHHHHHHHHhhhhhHH
Confidence 55666667777665553211222378999999999999999999888876665444
No 201
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=72.18 E-value=0.85 Score=48.12 Aligned_cols=153 Identities=16% Similarity=0.290 Sum_probs=111.2
Q ss_pred hhhhcCcchhHHHHHHHHhhcccccccccchhhhhhc--cCcchhHHHh-hhhcccccccc-ccccchhh---hhhhhHH
Q 014518 9 VSFFNNRWLVFVAAMWIQSCAGIGYLFGSISPVIKSS--LNYNQKQIAR-LGVAKDLGDSV-GFLAGSLC---EVLPIWG 81 (423)
Q Consensus 9 ~~~~~~Rw~~l~a~~~i~l~~Gt~Y~Fs~yS~~Lk~~--l~~sq~~l~~-i~~a~~vG~~~-g~~~G~l~---D~~gP~~ 81 (423)
.+...++++.+..=.+.-.-.-++|-.++|-..+.-. .+.+-..+-. .+..--+|..+ |++.+.+- +++|.++
T Consensus 234 ~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~ 313 (461)
T KOG3098|consen 234 FKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKP 313 (461)
T ss_pred HHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCc
Confidence 3445666666665555555556777888888888765 3444444444 23333344444 56666655 4568899
Q ss_pred HHHHHHhhhhhcceeeeeeeeCCCC-----------CchHHHHhhheeeecCCceeeehhhhhhhhhcCCCCCCCeeEee
Q 014518 82 ALLVGALQNFIGYGWVWLIVTGRAP-----------VLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGIL 150 (423)
Q Consensus 82 vl~iG~~~~~~Gy~~~~l~~~g~i~-----------~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~~RG~vvgil 150 (423)
+.++|.+.+..++.+..+.+-...| .+++....+..++.|.|-+..+|...+.+..-+|++|-.+-.+.
T Consensus 314 ~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~~~~~~~fsi~ 393 (461)
T KOG3098|consen 314 TVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLYPDDRAQAFSLF 393 (461)
T ss_pred chhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchHHHHHHH
Confidence 9999999999999999888865542 12344455667788999999999999999999999999999999
Q ss_pred ccccchhhHHH
Q 014518 151 KGFAGLGGAIL 161 (423)
Q Consensus 151 k~~~GLSaaI~ 161 (423)
|-+.++.+++.
T Consensus 394 kfyq~~~s~v~ 404 (461)
T KOG3098|consen 394 KFYQSVASCVA 404 (461)
T ss_pred HHHHHHHHHHH
Confidence 99999988875
No 202
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=69.01 E-value=0.82 Score=49.11 Aligned_cols=93 Identities=22% Similarity=0.238 Sum_probs=68.2
Q ss_pred CcchhHHHhhhhcccccc-ccccccchhhhhhhhHHHHHHHHhhhhhcceeee-eeeeCCCCCchHHHHhhheeeecCCc
Q 014518 47 NYNQKQIARLGVAKDLGD-SVGFLAGSLCEVLPIWGALLVGALQNFIGYGWVW-LIVTGRAPVLPLWAMCILIFVGNNGE 124 (423)
Q Consensus 47 ~~sq~~l~~i~~a~~vG~-~~g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~-l~~~g~i~~~~~~~l~~f~~l~g~g~ 124 (423)
.=|...+.++.++..+-. .+++++|.+.|++.+|.+++++-+...+....+. +.+.|.. +.|.+.++.++.|.+.
T Consensus 41 t~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~---~~~~Ll~~~fl~g~~~ 117 (524)
T PF05977_consen 41 TGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLL---SPWLLLILTFLLGIGS 117 (524)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcC---CHHHHHHHHHHHHHHH
Confidence 344455566777666766 4599999999999999999988877665554443 3445544 5788999999999999
Q ss_pred eeeehhhhhhhhhcCCCC
Q 014518 125 TYFNTAALVSCVQNFPKS 142 (423)
Q Consensus 125 ~~~~ta~l~t~~~nFP~~ 142 (423)
++.+.|-....-+--|++
T Consensus 118 a~~~PA~~A~ip~lV~~~ 135 (524)
T PF05977_consen 118 AFFNPAWQAIIPELVPKE 135 (524)
T ss_pred HHHHHHHHHHHHHhccHh
Confidence 988776666655666754
No 203
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=68.96 E-value=2 Score=45.50 Aligned_cols=146 Identities=21% Similarity=0.300 Sum_probs=90.7
Q ss_pred hhcCcchhHHHHHHHHhhc-c----cccccccchhhhhhccCcchhHHHh-hhhccccccccccc-cchhhhhhhhHHHH
Q 014518 11 FFNNRWLVFVAAMWIQSCA-G----IGYLFGSISPVIKSSLNYNQKQIAR-LGVAKDLGDSVGFL-AGSLCEVLPIWGAL 83 (423)
Q Consensus 11 ~~~~Rw~~l~a~~~i~l~~-G----t~Y~Fs~yS~~Lk~~l~~sq~~l~~-i~~a~~vG~~~g~~-~G~l~D~~gP~~vl 83 (423)
..+..+..+..+.++-+-- | ..|.| +|.++++++++.+. ++++.-++..-.++ .+.+.-.+|-+.++
T Consensus 238 ~~r~~l~l~l~~~~~~~~~~~~~~~~~~~y------l~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i 311 (463)
T KOG2816|consen 238 PDRLLLLLLLVAFLSSLPEAGGASDVLLLY------LKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLI 311 (463)
T ss_pred CCccchHHHHHHHHHHHHHhcCceeEEEEE------EeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHh
Confidence 3445566555555554322 1 33555 99999999999995 66655555533333 44777788888899
Q ss_pred HHHHhhhhhcceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCCCCCCCeeEeeccccchhhHHHHH
Q 014518 84 LVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQ 163 (423)
Q Consensus 84 ~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~~RG~vvgilk~~~GLSaaI~s~ 163 (423)
.+|..+.++++.++..+-. .|++..-..+.+.+....-.-.-....-..|+++|+|.++....-||++.+.+.
T Consensus 312 ~lGl~~~~~~~~~~af~~~-------~w~~~~~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~ 384 (463)
T KOG2816|consen 312 SLGLLSEFLQLLLFAFATE-------TWMMFAAGVVVALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPA 384 (463)
T ss_pred hHHHHHHHHHHHHHHHhcc-------chhhhHHHHHHHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHH
Confidence 9999998888877443322 233333333333323222222233344456899999999998888877766666
Q ss_pred HHHHhc
Q 014518 164 VYTMIH 169 (423)
Q Consensus 164 i~~~~f 169 (423)
+|...|
T Consensus 385 ~~~~i~ 390 (463)
T KOG2816|consen 385 LYGNIF 390 (463)
T ss_pred HHHHHH
Confidence 665554
No 204
>PRK10429 melibiose:sodium symporter; Provisional
Probab=68.50 E-value=0.45 Score=49.85 Aligned_cols=123 Identities=15% Similarity=0.071 Sum_probs=70.9
Q ss_pred hhhhccCcchhHHHhhh-hccccccccccccchhhhh----hhh-HHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHh
Q 014518 41 VIKSSLNYNQKQIARLG-VAKDLGDSVGFLAGSLCEV----LPI-WGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMC 114 (423)
Q Consensus 41 ~Lk~~l~~sq~~l~~i~-~a~~vG~~~g~~~G~l~D~----~gP-~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~ 114 (423)
-+.+.+|++..+..++- +..-.....-++.|.+.|+ +|. |+-+++|++...+++.++|..- +.-....++.++
T Consensus 32 yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p-~~~~~~~~~~~~ 110 (473)
T PRK10429 32 YYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAH-LFEGTAQYVFVC 110 (473)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCC-CCCccHHHHHHH
Confidence 35677899999998844 3333444557789999995 487 7778889888888877766432 111111122233
Q ss_pred hheeeecCCceeeeh--hhhhhhhhcCCCCCCCeeEeeccccchhhHHHHHH
Q 014518 115 ILIFVGNNGETYFNT--AALVSCVQNFPKSRGPVVGILKGFAGLGGAILTQV 164 (423)
Q Consensus 115 ~f~~l~g~g~~~~~t--a~l~t~~~nFP~~RG~vvgilk~~~GLSaaI~s~i 164 (423)
+...+.+.+-++.++ .++...+..=|++|..+.+.--.+..+++.+.+.+
T Consensus 111 ~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~ 162 (473)
T PRK10429 111 VTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGF 162 (473)
T ss_pred HHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222222333332222 24556666557888887777433344554554433
No 205
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=67.28 E-value=3.9 Score=44.92 Aligned_cols=85 Identities=8% Similarity=0.009 Sum_probs=53.2
Q ss_pred HhhhhcCcchhHHHHHHHHhhcccccccccchhh-hhhccCcchhHHHhhhhcccc-cccc-ccccchhhhhhh--hHHH
Q 014518 8 FVSFFNNRWLVFVAAMWIQSCAGIGYLFGSISPV-IKSSLNYNQKQIARLGVAKDL-GDSV-GFLAGSLCEVLP--IWGA 82 (423)
Q Consensus 8 ~~~~~~~Rw~~l~a~~~i~l~~Gt~Y~Fs~yS~~-Lk~~l~~sq~~l~~i~~a~~v-G~~~-g~~~G~l~D~~g--P~~v 82 (423)
.++..++|.+++..... .+..+..|.|..|.|. +++++|++..+.+.+.....+ +..+ .+++|++.||++ .|.+
T Consensus 323 ~~~Ll~n~~f~~~~l~~-~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~ 401 (633)
T TIGR00805 323 IKRLLCNPIYMLVILAQ-VIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKA 401 (633)
T ss_pred HHHHHcCcHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHH
Confidence 44566777554433222 2334445666666665 455799999999987655444 4444 567999999998 5566
Q ss_pred HHHHHhhhhhc
Q 014518 83 LLVGALQNFIG 93 (423)
Q Consensus 83 l~iG~~~~~~G 93 (423)
+.++.++..++
T Consensus 402 ~~~~~~~~~~~ 412 (633)
T TIGR00805 402 AYFAICLSTLS 412 (633)
T ss_pred HHHHHHHHHHH
Confidence 66666554444
No 206
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=64.99 E-value=0.84 Score=42.00 Aligned_cols=110 Identities=25% Similarity=0.258 Sum_probs=68.3
Q ss_pred hhhhhhccCcch--hHHHhhhhccccccccc-cccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHhh
Q 014518 39 SPVIKSSLNYNQ--KQIARLGVAKDLGDSVG-FLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCI 115 (423)
Q Consensus 39 S~~Lk~~l~~sq--~~l~~i~~a~~vG~~~g-~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~ 115 (423)
.+.+.+.++.+. .+...+.....++..++ ++.|.+.|+.|+|....++......|......... ...+.+.+
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 99 (338)
T COG0477 25 LPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPN-----VGLALLLI 99 (338)
T ss_pred HHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCcc-----chHHHHHH
Confidence 333444444444 35555555556666554 79999999999987777777654444222222222 23445555
Q ss_pred heeeecCCceeeehhhhhhhhhcCCC--CCCCeeEeeccc
Q 014518 116 LIFVGNNGETYFNTAALVSCVQNFPK--SRGPVVGILKGF 153 (423)
Q Consensus 116 f~~l~g~g~~~~~ta~l~t~~~nFP~--~RG~vvgilk~~ 153 (423)
...+.|.+.+....+........+|+ +||.+.++....
T Consensus 100 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (338)
T COG0477 100 LRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLG 139 (338)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHH
Confidence 55556777777777777777788896 677777766664
No 207
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=63.90 E-value=0.6 Score=49.96 Aligned_cols=132 Identities=16% Similarity=0.068 Sum_probs=81.7
Q ss_pred HHHHhhcccccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhh--HHHHHHHHhhhhhcceeeee
Q 014518 23 MWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPI--WGALLVGALQNFIGYGWVWL 99 (423)
Q Consensus 23 ~~i~l~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP--~~vl~iG~~~~~~Gy~~~~l 99 (423)
....+..-.-+.+.+|-+...+.++++++|.+.+-....+...+ =+..|++.|+.++ +.+..++.+. .|...++.
T Consensus 305 ~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~--~gl~~~~~ 382 (509)
T KOG2504|consen 305 LSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLI--AGLARLFL 382 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHH--HHHHHHHH
Confidence 33334444456677888888889999999999966555555555 5679999999884 4555555544 44444444
Q ss_pred eeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCCC-CCCCeeEeeccccchhhHHH
Q 014518 100 IVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLGGAIL 161 (423)
Q Consensus 100 ~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~-~RG~vvgilk~~~GLSaaI~ 161 (423)
.+.. +++.++.+..+-|++.+.+..=.-++.+...+. +=..+-|++.-+-|+++.+-
T Consensus 383 p~~~-----~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~g 440 (509)
T KOG2504|consen 383 PFAT-----TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVG 440 (509)
T ss_pred HHhc-----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcC
Confidence 3333 356777777777776665532222455666653 33555555555555555444
No 208
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=63.65 E-value=0.16 Score=52.84 Aligned_cols=155 Identities=12% Similarity=0.072 Sum_probs=91.0
Q ss_pred cccchhhhhhccCcchhHHHhhhhccccccc-cccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHH
Q 014518 35 FGSISPVIKSSLNYNQKQIARLGVAKDLGDS-VGFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAM 113 (423)
Q Consensus 35 Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~-~g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l 113 (423)
|+.|...+=+.-+.+++-...+.+.+.+-.. +..+...+.+|.|||..++++++...+=..+ .+..+ +.|.+
T Consensus 243 f~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~-----~~~~~--~~~~i 315 (412)
T PF01306_consen 243 FPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIG-----SGFAT--NPWVI 315 (412)
T ss_dssp HHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH-----HHT----SHHHH
T ss_pred HHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHH-----Hhhhc--chHHH
Confidence 4444444434344444444444443334443 3668999999999999999999887755443 11222 35566
Q ss_pred hhheeeecCCceeeehhhhhhhhhcCCCC-CCCeeEee-ccccchhhHHHHHHHHHhcCCC--ccceeeeeeechhhhhh
Q 014518 114 CILIFVGNNGETYFNTAALVSCVQNFPKS-RGPVVGIL-KGFAGLGGAILTQVYTMIHAPD--HANLIFMVAVGPAMVVI 189 (423)
Q Consensus 114 ~~f~~l~g~g~~~~~ta~l~t~~~nFP~~-RG~vvgil-k~~~GLSaaI~s~i~~~~f~~~--~~~fllfla~~~~~v~~ 189 (423)
.+.-.+-+.--+....|+++=..++||++ ..++-.+- .-..|+|..+++.+.-..++.- ...| +.++.......+
T Consensus 316 ~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~ty-limg~iv~~~~l 394 (412)
T PF01306_consen 316 SLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTY-LIMGLIVLPFTL 394 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHH-HHHHHHHHHHHH
Confidence 77777777777788889999999999965 23444332 3445677777777766555432 1234 334444455555
Q ss_pred hheeeEec
Q 014518 190 ALMFIIRP 197 (423)
Q Consensus 190 ~~~~fvr~ 197 (423)
++.+..|-
T Consensus 395 i~~f~l~~ 402 (412)
T PF01306_consen 395 ISAFTLKK 402 (412)
T ss_dssp HHHHHS--
T ss_pred HheeeecC
Confidence 66555553
No 209
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=63.50 E-value=2.3 Score=45.82 Aligned_cols=75 Identities=17% Similarity=0.090 Sum_probs=0.0
Q ss_pred HHHHHhhcccccccccchhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeee
Q 014518 22 AMWIQSCAGIGYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVW 98 (423)
Q Consensus 22 ~~~i~l~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~ 98 (423)
..++| .....|.-+.-+ ++++|++++.+|...|..+.|+|..+ .++...+-+|..+-..+-+|+++..+|++++.
T Consensus 11 ~~~~q-~~~~g~~~~~lt-tiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~ 86 (539)
T PF03137_consen 11 LGLFQ-MMVSGYVNSSLT-TIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFA 86 (539)
T ss_dssp ------------------------------------------------------------------------------
T ss_pred HHHHH-HHHHHHHHHHHH-HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHh
Confidence 34445 455556666665 89999999999999999999999966 66666666654332334678888888887753
No 210
>PRK11462 putative transporter; Provisional
Probab=62.65 E-value=0.55 Score=49.27 Aligned_cols=24 Identities=13% Similarity=-0.176 Sum_probs=18.0
Q ss_pred ccccchhhhhhhhHHHHHHHHhhh
Q 014518 67 GFLAGSLCEVLPIWGALLVGALQN 90 (423)
Q Consensus 67 g~~~G~l~D~~gP~~vl~iG~~~~ 90 (423)
.++++.+.||+|.|.+...+.+..
T Consensus 280 ~~l~~~l~~r~gkk~~~~~~~~~~ 303 (460)
T PRK11462 280 SALAKPLTDWKCKVTIFWWTNALL 303 (460)
T ss_pred HHHHHHHHHHhChHHHHHHHHHHH
Confidence 457899999999988876555443
No 211
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=60.93 E-value=1 Score=46.83 Aligned_cols=100 Identities=15% Similarity=0.151 Sum_probs=67.1
Q ss_pred CcchhhhHhhhhcCcch--hHHHHHHHHhhcccccccccchhh-hhhccCcchhHHHhhhhcccccccc-ccccchhhhh
Q 014518 1 MGKFQERFVSFFNNRWL--VFVAAMWIQSCAGIGYLFGSISPV-IKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEV 76 (423)
Q Consensus 1 ~~~~~~~~~~~~~~Rw~--~l~a~~~i~l~~Gt~Y~Fs~yS~~-Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~ 76 (423)
|..|+-+.+-+.+||++ .-++.+++=+. -|.=..|+|- |+|..|+|-.+.+..-+.-.+|+.. .++.|++.|+
T Consensus 238 ls~~~i~~~YVL~Nk~iW~la~a~vfvYiv---R~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDk 314 (448)
T COG2271 238 LTAWQIFVKYVLKNKLIWLLALANVFVYVV---RYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDK 314 (448)
T ss_pred ccHHHHHHHHHHcChHHHHHHHHHHHHHHH---HHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 45677888888999955 44455554332 2333444442 6788999999999966667777766 5679999999
Q ss_pred hh---hHHHHHHHHhhhhhcceeeeeeeeC
Q 014518 77 LP---IWGALLVGALQNFIGYGWVWLIVTG 103 (423)
Q Consensus 77 ~g---P~~vl~iG~~~~~~Gy~~~~l~~~g 103 (423)
.- +.++.++-++..++.-..+|+.=++
T Consensus 315 lfkgrR~p~~~i~~~~i~~~~~~~w~~~~~ 344 (448)
T COG2271 315 LFKGRRGPMALIFMLLITASLVLYWLAPNG 344 (448)
T ss_pred hcccccchHHHHHHHHHHHHHHHHHcCCCc
Confidence 73 3445555555566666666666555
No 212
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=60.77 E-value=3.3 Score=43.79 Aligned_cols=78 Identities=14% Similarity=0.152 Sum_probs=55.2
Q ss_pred ccCcchhHHHh--hhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHhhheeeec
Q 014518 45 SLNYNQKQIAR--LGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGN 121 (423)
Q Consensus 45 ~l~~sq~~l~~--i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g 121 (423)
.+.+++.|+.. ...+...+... -++.-.+.+++|+|.+..+|.++..+||.++|..- ..+++.+.++.++.+
T Consensus 264 ~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~-----~~~~~l~~~~~~i~~ 338 (467)
T COG2211 264 TYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTP-----AGSVVLIVVALIIAG 338 (467)
T ss_pred EEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhc-----CcchHHHHHHHHHHH
Confidence 35566666555 33333344344 35789999999999999999999999999988776 224666666667766
Q ss_pred CCceee
Q 014518 122 NGETYF 127 (423)
Q Consensus 122 ~g~~~~ 127 (423)
.|.+..
T Consensus 339 ~g~~~~ 344 (467)
T COG2211 339 VGTGIA 344 (467)
T ss_pred HHhhcc
Confidence 666644
No 213
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=57.03 E-value=3.7 Score=45.38 Aligned_cols=59 Identities=7% Similarity=0.049 Sum_probs=47.2
Q ss_pred hhhccCcchhHHHh-hhhccccccccccccchhhhhh-hhHHHHHHHHhhhhhcceeeeee
Q 014518 42 IKSSLNYNQKQIAR-LGVAKDLGDSVGFLAGSLCEVL-PIWGALLVGALQNFIGYGWVWLI 100 (423)
Q Consensus 42 Lk~~l~~sq~~l~~-i~~a~~vG~~~g~~~G~l~D~~-gP~~vl~iG~~~~~~Gy~~~~l~ 100 (423)
|.+.+|+++++... .+.+.-+.-.+++++|.+.|++ |.+..+++|+++..+|+.++.+.
T Consensus 14 l~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~ 74 (654)
T TIGR00926 14 FLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFG 74 (654)
T ss_pred HHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhc
Confidence 55678999998887 4444444445588999999985 99999999999999999887653
No 214
>PF12832 MFS_1_like: MFS_1 like family
Probab=55.53 E-value=7.3 Score=30.58 Aligned_cols=51 Identities=24% Similarity=0.247 Sum_probs=39.3
Q ss_pred chhhhhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhhHHHHHHHHhh
Q 014518 38 ISPVIKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQ 89 (423)
Q Consensus 38 yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~ 89 (423)
.+--+| +.|+|..|+..+.....+-..+ .++.|.+.||++.+...++++..
T Consensus 23 l~~~~~-~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 23 LPLYLK-QLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred hhHhhh-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 444455 4999999999987766666655 66799999999988777777654
No 215
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=53.25 E-value=0.31 Score=51.76 Aligned_cols=100 Identities=14% Similarity=0.052 Sum_probs=70.0
Q ss_pred ccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeC--CCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCCC-CCCC
Q 014518 69 LAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTG--RAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRGP 145 (423)
Q Consensus 69 ~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g--~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~-~RG~ 145 (423)
.++.+-+|.++...+.+|.++..+|+..+...-.. .-...++|.+....++.+.|..+..-..+.-..+.=|. .||.
T Consensus 339 ~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~ 418 (500)
T PRK09584 339 IYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGF 418 (500)
T ss_pred HHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHH
Confidence 34566666678889999999999998886554321 00112344455566667788888877777778888885 6999
Q ss_pred eeEeeccccchhhHHHHHHHHHh
Q 014518 146 VVGILKGFAGLGGAILTQVYTMI 168 (423)
Q Consensus 146 vvgilk~~~GLSaaI~s~i~~~~ 168 (423)
+.|+.--..++|+.+.+++....
T Consensus 419 ~~g~~~l~~a~g~~~~g~~~~~~ 441 (500)
T PRK09584 419 IMGSWFLTTAGAALIAGYVANLM 441 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Confidence 99977666677878777776543
No 216
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=52.82 E-value=3 Score=37.50 Aligned_cols=89 Identities=15% Similarity=0.048 Sum_probs=61.2
Q ss_pred ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCC
Q 014518 67 GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGP 145 (423)
Q Consensus 67 g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~ 145 (423)
.++...+.++.|||+.+++|++...+=.. ++ . -|..|.+-.-.++.|.|.+...+|--.-..++-. ++|+.
T Consensus 54 ~l~~P~iv~~lg~K~sm~lg~~~y~~y~~----~~---~-~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~ 125 (156)
T PF05978_consen 54 CLFAPSIVNKLGPKWSMILGSLGYAIYIA----SF---F-YPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGR 125 (156)
T ss_pred HHhHHHHHHHHhhHHHHHHHHHHHHHHHH----HH---H-hhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhh
Confidence 56678899999999999999987542111 11 1 1235566777788899999888877666666664 56888
Q ss_pred eeEeeccccchhhHHHHHH
Q 014518 146 VVGILKGFAGLGGAILTQV 164 (423)
Q Consensus 146 vvgilk~~~GLSaaI~s~i 164 (423)
-.|+..+.+-.| .++..+
T Consensus 126 ~~~ifw~i~~~s-~i~G~~ 143 (156)
T PF05978_consen 126 NTGIFWAIFQSS-LIFGNL 143 (156)
T ss_pred HHHHHHHHHHHH-HHHHHH
Confidence 888877776654 344433
No 217
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=43.46 E-value=5.2 Score=41.18 Aligned_cols=92 Identities=12% Similarity=0.083 Sum_probs=53.9
Q ss_pred ccccchhhhhhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCCCCCCCe
Q 014518 67 GFLAGSLCEVLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPKSRGPV 146 (423)
Q Consensus 67 g~~~G~l~D~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~~RG~v 146 (423)
.+.+|.+.||.+||.++.+.++...+...+... ..+. ..++.+.+. |...+..+..-.....++++++...+
T Consensus 286 R~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~-~~~~---~~~~~l~~~----glf~s~~fp~i~sl~~~~~g~~~~~~ 357 (410)
T TIGR00885 286 RFIGTWLISYLAAHKVLMAYAIIGMALCLGSIF-AGGH---VGLYCLTLC----SAFMSLMFPTIYGIALKGLGQDTKYG 357 (410)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH-cCCh---HHHHHHHHH----HHHHHHHHHHHHHHHHhhhhhhhhhh
Confidence 466799999999999888888777666655443 2221 122222221 22232233667778889998776554
Q ss_pred eEeeccccchhhHHHHHHHHH
Q 014518 147 VGILKGFAGLGGAILTQVYTM 167 (423)
Q Consensus 147 vgilk~~~GLSaaI~s~i~~~ 167 (423)
.+++.... .+++++..+.-.
T Consensus 358 s~~l~~~~-~Gga~~p~l~G~ 377 (410)
T TIGR00885 358 AAGLVMAI-IGGGIVPPLQGF 377 (410)
T ss_pred HHHHHHHH-hccchHHHHHHH
Confidence 44433333 666666444433
No 218
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=42.32 E-value=11 Score=37.85 Aligned_cols=113 Identities=17% Similarity=0.220 Sum_probs=68.9
Q ss_pred hhhccCcchhHHHh-hhhccccccccccccchhhhhhhhHHHHHHHHhhhh-hcceeeeeeeeCCCCCchHHHHhhheee
Q 014518 42 IKSSLNYNQKQIAR-LGVAKDLGDSVGFLAGSLCEVLPIWGALLVGALQNF-IGYGWVWLIVTGRAPVLPLWAMCILIFV 119 (423)
Q Consensus 42 Lk~~l~~sq~~l~~-i~~a~~vG~~~g~~~G~l~D~~gP~~vl~iG~~~~~-~Gy~~~~l~~~g~i~~~~~~~l~~f~~l 119 (423)
+++|+|+|..+.++ .++.-.+-.......|.+.|++|.....+..+...+ +|=.++ +++-. + |+.-||+.
T Consensus 291 F~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l--~Ft~l--s-Py~~m~~l--- 362 (459)
T KOG4686|consen 291 FQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGL--FFTFL--S-PYTSMTFL--- 362 (459)
T ss_pred HHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhH--Hhhhc--c-HHHHHHHH---
Confidence 68999999988887 566555666667889999999998655555444433 343332 22221 1 45456642
Q ss_pred ecCCceeeehhh-hhhhhhcC-CC-CCCCeeEeeccccchhhHHHHHHH
Q 014518 120 GNNGETYFNTAA-LVSCVQNF-PK-SRGPVVGILKGFAGLGGAILTQVY 165 (423)
Q Consensus 120 ~g~g~~~~~ta~-l~t~~~nF-P~-~RG~vvgilk~~~GLSaaI~s~i~ 165 (423)
|.+ ..-.|| +=.|+..- |+ +-|++-|...+..-|+=++.+-|.
T Consensus 363 -GLs--ysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iia 408 (459)
T KOG4686|consen 363 -GLS--YSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIA 408 (459)
T ss_pred -hhh--HHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhh
Confidence 222 222344 33333333 75 469888888887777766665443
No 219
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=37.02 E-value=6.4 Score=38.96 Aligned_cols=67 Identities=16% Similarity=0.139 Sum_probs=50.7
Q ss_pred HHHHhhhHHHHHHHHHhcCCCCceeecchhhhhhh---cCCCCc--eeeeehhhHhhhhhcccccccceeec
Q 014518 356 QALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQS---LGYDNT--HIFVSMISIWNFLGRVGGGYFSEIIV 422 (423)
Q Consensus 356 q~l~t~dFWllf~~~~~g~G~Gl~~InN~gqI~~a---lg~~~~--~~~VsL~Si~n~~GRl~~G~~SD~l~ 422 (423)
..++++.+|+..+.+++-.|....+-+....-.+. +|.++. ...++.+..+-.+||+..+.++||+.
T Consensus 135 ~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g 206 (310)
T TIGR01272 135 SAFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMIS 206 (310)
T ss_pred hHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 46788999999999999998887655444433321 344443 35899999999999999999999873
No 220
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=35.34 E-value=24 Score=28.47 Aligned_cols=62 Identities=23% Similarity=0.252 Sum_probs=47.5
Q ss_pred ccccccchhhhhhccCcchhHHHhhhhcccccccccc-ccchhhhhhhhHHHHHHHHhhhhhc
Q 014518 32 GYLFGSISPVIKSSLNYNQKQIARLGVAKDLGDSVGF-LAGSLCEVLPIWGALLVGALQNFIG 93 (423)
Q Consensus 32 ~Y~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~~~g~-~~G~l~D~~gP~~vl~iG~~~~~~G 93 (423)
-++|.-.=|.|+++.++|.+|-..++++.-+|=.+|- ...++-++..++..+.+|.+...+-
T Consensus 8 RFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~ 70 (85)
T PF06779_consen 8 RFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLS 70 (85)
T ss_pred HHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 3566677799999999999999999998888876654 4666677777777777777764433
No 221
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=31.11 E-value=11 Score=37.73 Aligned_cols=143 Identities=19% Similarity=0.202 Sum_probs=90.7
Q ss_pred hhhcCcchhHHHHHHHHhhcccccccc---cchhhhhhccCcchhHHHhhhhcccccc-ccccccchhhhhh-hhHHHHH
Q 014518 10 SFFNNRWLVFVAAMWIQSCAGIGYLFG---SISPVIKSSLNYNQKQIARLGVAKDLGD-SVGFLAGSLCEVL-PIWGALL 84 (423)
Q Consensus 10 ~~~~~Rw~~l~a~~~i~l~~Gt~Y~Fs---~yS~~Lk~~l~~sq~~l~~i~~a~~vG~-~~g~~~G~l~D~~-gP~~vl~ 84 (423)
+.+.+|++.|+--++.. =|+-++|- .-..+.|...+++.++..++=..-.-=. .+.+++|++.|+. |-|+--.
T Consensus 37 S~l~hr~m~lv~mc~lg--fgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gti 114 (459)
T KOG4686|consen 37 SALGHRFMALVFMCLLG--FGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTI 114 (459)
T ss_pred hhhhhHHHHHHHHHHhc--ccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHH
Confidence 34567887775433332 23333332 2234556666666666665322111111 3377899999984 8877777
Q ss_pred HHHhhhhhcceeeeeeeeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCC-CCCCCeeEeeccccchhh
Q 014518 85 VGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFP-KSRGPVVGILKGFAGLGG 158 (423)
Q Consensus 85 iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP-~~RG~vvgilk~~~GLSa 158 (423)
|=+.+.++|=+. ...|.|. .++|.|.+=-++-|+|.-..-.|-=+-++.||. ++-+.|-|+..+.-=+++
T Consensus 115 i~~~fv~~Gqli---Fa~Ggi~-~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~Gs 185 (459)
T KOG4686|consen 115 ILCIFVFLGQLI---FAAGGIS-HAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGS 185 (459)
T ss_pred HHHHHHHHHHHH---HHhchHH-HHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhc
Confidence 777777788765 3446663 479999998889899888775555566788895 567888888776655554
No 222
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=29.75 E-value=25 Score=36.40 Aligned_cols=45 Identities=18% Similarity=0.296 Sum_probs=33.0
Q ss_pred ccccccc-ccccchhhhhhhhHH------HHHHHHhhhhhcceeeeeeeeCC
Q 014518 60 KDLGDSV-GFLAGSLCEVLPIWG------ALLVGALQNFIGYGWVWLIVTGR 104 (423)
Q Consensus 60 ~~vG~~~-g~~~G~l~D~~gP~~------vl~iG~~~~~~Gy~~~~l~~~g~ 104 (423)
.-+|..+ ++.+|.++|++|++. +..+++++..+....+++.++.+
T Consensus 347 ~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 347 FGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred hhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 4567766 668999999999874 45667777777777777666554
No 223
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=26.80 E-value=8 Score=40.16 Aligned_cols=103 Identities=20% Similarity=0.262 Sum_probs=77.3
Q ss_pred hccCcchhHHHhhhhcccccccccc-ccchhhh-hhhhHHHHHHHHhhhhhcceeeeeeeeCCCCCchHHHHhhheeeec
Q 014518 44 SSLNYNQKQIARLGVAKDLGDSVGF-LAGSLCE-VLPIWGALLVGALQNFIGYGWVWLIVTGRAPVLPLWAMCILIFVGN 121 (423)
Q Consensus 44 ~~l~~sq~~l~~i~~a~~vG~~~g~-~~G~l~D-~~gP~~vl~iG~~~~~~Gy~~~~l~~~g~i~~~~~~~l~~f~~l~g 121 (423)
+-+|+|..|.+.++-.-..|..+|+ ..|++.. +.+|+....+|++....+..++ .+.+... +.|.+-.-.++.|
T Consensus 237 ~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~li--i~a~~~~--~~~~~~~~~~l~G 312 (403)
T PF03209_consen 237 EVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALI--ILAGPLG--SPWLFRPGVFLLG 312 (403)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHH--HHHHhcc--cchHHHHHHHHHH
Confidence 5599999999999999999998876 5777776 6788888889998887777653 3445543 3455566667789
Q ss_pred CCceeeehhhhhhhhhcC-CCCCCCeeEee
Q 014518 122 NGETYFNTAALVSCVQNF-PKSRGPVVGIL 150 (423)
Q Consensus 122 ~g~~~~~ta~l~t~~~nF-P~~RG~vvgil 150 (423)
+|.+.+..+++...+.-= |.+.|+.+|.-
T Consensus 313 ~g~G~f~vgals~mM~lt~~~~aG~~mG~W 342 (403)
T PF03209_consen 313 LGNGLFTVGALSLMMDLTSAGRAGLFMGAW 342 (403)
T ss_pred HhhhHHHHHHHHHHHhCCCCcchhHHHHHH
Confidence 999999999888888776 45556554443
No 224
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=25.64 E-value=7.7 Score=41.10 Aligned_cols=147 Identities=23% Similarity=0.274 Sum_probs=92.3
Q ss_pred HHHHHHHhhccc--ccccccchhh-hhhccCcchhHHHhhhhcccccccc-ccccchhhhhhhh-------HHHHHHHHh
Q 014518 20 VAAMWIQSCAGI--GYLFGSISPV-IKSSLNYNQKQIARLGVAKDLGDSV-GFLAGSLCEVLPI-------WGALLVGAL 88 (423)
Q Consensus 20 ~a~~~i~l~~Gt--~Y~Fs~yS~~-Lk~~l~~sq~~l~~i~~a~~vG~~~-g~~~G~l~D~~gP-------~~vl~iG~~ 88 (423)
+-++|++.+++. .|.+-.|.|. ||+.+|+|-++...++..-.+...+ .+.+|.+.|+.-. +.-++=...
T Consensus 260 vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~ 339 (466)
T KOG2532|consen 260 VWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIA 339 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHH
Confidence 345666655553 5666777775 6778999999999988777777744 8899999999865 222222333
Q ss_pred hhhhcceeeeeeeeCCCCC-chHHHHhhheeeecCCceeeehhhhhhhhhc-CCCCCCCeeEeeccccchhhHHHHHHHH
Q 014518 89 QNFIGYGWVWLIVTGRAPV-LPLWAMCILIFVGNNGETYFNTAALVSCVQN-FPKSRGPVVGILKGFAGLGGAILTQVYT 166 (423)
Q Consensus 89 ~~~~Gy~~~~l~~~g~i~~-~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~n-FP~~RG~vvgilk~~~GLSaaI~s~i~~ 166 (423)
+...|.+++-+.+.+.-.. ..+..+.+... ...++.+-...|..- =|++-|.+.|+.-....+++.+--.+-.
T Consensus 340 ~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~-----~~g~~~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg 414 (466)
T KOG2532|consen 340 FGGPAVFLLVLAFTSDEHRLLAVILLTIAIG-----LSGFNISGFYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVG 414 (466)
T ss_pred HHHHHHHHHeeeecCCCcchHHHHHHHHHHH-----HcccchhhhHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHhee
Confidence 3335556666666664322 12222222222 233334444455555 5888999999888888888777766666
Q ss_pred HhcCC
Q 014518 167 MIHAP 171 (423)
Q Consensus 167 ~~f~~ 171 (423)
.+-++
T Consensus 415 ~~~~~ 419 (466)
T KOG2532|consen 415 IIVTD 419 (466)
T ss_pred eEeCC
Confidence 66543
No 225
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=24.71 E-value=89 Score=35.12 Aligned_cols=75 Identities=13% Similarity=0.223 Sum_probs=48.3
Q ss_pred hhhhHhhhhcCcchhHHHHHHHHhhcccccccccchh-hhhhccCcchhHHHh-hhhcccccccccc-ccchhhhhhhh
Q 014518 4 FQERFVSFFNNRWLVFVAAMWIQSCAGIGYLFGSISP-VIKSSLNYNQKQIAR-LGVAKDLGDSVGF-LAGSLCEVLPI 79 (423)
Q Consensus 4 ~~~~~~~~~~~Rw~~l~a~~~i~l~~Gt~Y~Fs~yS~-~Lk~~l~~sq~~l~~-i~~a~~vG~~~g~-~~G~l~D~~gP 79 (423)
|....++..+|...+++.-..+.=.... -.|..|-| -|+.+|+.+|++.|. +|....-+..+|+ ++|++.-|+-+
T Consensus 381 fp~s~~~ll~N~if~~~~l~~~~~~~~~-~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl 458 (735)
T KOG3626|consen 381 FPKSIKRLLSNPIFMLVVLASVIESLAI-TGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKL 458 (735)
T ss_pred HHHHHHHHhcCchHHHHHHHHHHHHHHH-hhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecc
Confidence 4566778888886655444333322221 12444554 466689999999999 4565555557776 58999998854
No 226
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=23.61 E-value=15 Score=38.33 Aligned_cols=64 Identities=11% Similarity=0.052 Sum_probs=41.4
Q ss_pred ccccchhhhhhccCcchhHHHhhhhcccccc-ccccccchhhhhhhhHHH--HHHHHhhhhhcceee
Q 014518 34 LFGSISPVIKSSLNYNQKQIARLGVAKDLGD-SVGFLAGSLCEVLPIWGA--LLVGALQNFIGYGWV 97 (423)
Q Consensus 34 ~Fs~yS~~Lk~~l~~sq~~l~~i~~a~~vG~-~~g~~~G~l~D~~gP~~v--l~iG~~~~~~Gy~~~ 97 (423)
.++.|+.=|++..|+|.+|+.++=.++-+-. .+.++.|.+.||.|-|.- ..+..++.+.|-+.+
T Consensus 26 ~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~ 92 (412)
T PF01306_consen 26 FLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFI 92 (412)
T ss_dssp HHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHH
Confidence 4566777888999999999999655554455 447889999999995443 344444444454443
No 227
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=22.37 E-value=44 Score=26.97 Aligned_cols=38 Identities=21% Similarity=0.252 Sum_probs=23.1
Q ss_pred hhhcccccccc-ccccchhhhhhhhHHHHHHHHhhhhhc
Q 014518 56 LGVAKDLGDSV-GFLAGSLCEVLPIWGALLVGALQNFIG 93 (423)
Q Consensus 56 i~~a~~vG~~~-g~~~G~l~D~~gP~~vl~iG~~~~~~G 93 (423)
......+|..+ ....|.+.|+.+.+....+.++...++
T Consensus 92 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (141)
T TIGR00880 92 MSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAA 130 (141)
T ss_pred HHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHH
Confidence 44555566655 335777888877766666655554443
No 228
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=21.63 E-value=5 Score=42.25 Aligned_cols=96 Identities=15% Similarity=0.095 Sum_probs=64.9
Q ss_pred hhhhh-hhhHHHH--HHHHhhhhhcceeeeee---eeCCCCCchHHHHhhheeeecCCceeeehhhhhhhhhcCCC-CCC
Q 014518 72 SLCEV-LPIWGAL--LVGALQNFIGYGWVWLI---VTGRAPVLPLWAMCILIFVGNNGETYFNTAALVSCVQNFPK-SRG 144 (423)
Q Consensus 72 ~l~D~-~gP~~vl--~iG~~~~~~Gy~~~~l~---~~g~i~~~~~~~l~~f~~l~g~g~~~~~ta~l~t~~~nFP~-~RG 144 (423)
.+-+| .+|+... .+|.++..+|+..+.+. ..+.. ..++|.+....++.+.|-.+...+...-..+.-|+ .||
T Consensus 338 ~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~-~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g 416 (475)
T TIGR00924 338 RLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGG-LTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMG 416 (475)
T ss_pred HHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCC-ccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHH
Confidence 44443 3445544 78888877787765532 11111 12566666677777888888877777777777785 699
Q ss_pred CeeEeeccccchhhHHHHHHHHHh
Q 014518 145 PVVGILKGFAGLGGAILTQVYTMI 168 (423)
Q Consensus 145 ~vvgilk~~~GLSaaI~s~i~~~~ 168 (423)
...|+.-...++|..+-+.+....
T Consensus 417 ~~~g~~~l~~~~g~~l~~~~~~~~ 440 (475)
T TIGR00924 417 QMLGMWFLAQAMGSLLGGYLATFG 440 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999988888888776665544
Done!