Query 014522
Match_columns 423
No_of_seqs 179 out of 2264
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 13:06:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014522.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014522hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a9w_A Monooxygenase; baeyer-v 100.0 2.5E-41 8.6E-46 321.6 30.2 343 21-403 3-353 (357)
2 2xve_A Flavin-containing monoo 100.0 2.4E-40 8.2E-45 324.9 28.8 308 21-402 2-341 (464)
3 3gwf_A Cyclohexanone monooxyge 100.0 6.4E-41 2.2E-45 333.7 22.7 364 20-399 7-454 (540)
4 3uox_A Otemo; baeyer-villiger 100.0 4.9E-40 1.7E-44 327.7 22.2 368 20-399 8-463 (545)
5 4ap3_A Steroid monooxygenase; 100.0 5.7E-39 2E-43 320.3 27.7 368 20-399 20-468 (549)
6 1w4x_A Phenylacetone monooxyge 100.0 7.8E-38 2.7E-42 313.1 28.1 367 20-401 15-465 (542)
7 3f8d_A Thioredoxin reductase ( 100.0 7.1E-38 2.4E-42 293.7 20.6 290 19-406 13-321 (323)
8 2gv8_A Monooxygenase; FMO, FAD 100.0 1.9E-37 6.7E-42 303.7 24.1 302 20-402 5-362 (447)
9 3lzw_A Ferredoxin--NADP reduct 100.0 1.3E-37 4.4E-42 293.2 18.9 294 20-404 6-317 (332)
10 3itj_A Thioredoxin reductase 1 100.0 1.7E-37 5.8E-42 293.1 18.1 295 17-403 18-336 (338)
11 3fbs_A Oxidoreductase; structu 100.0 1.3E-36 4.5E-41 281.7 21.9 283 20-403 1-293 (297)
12 2q7v_A Thioredoxin reductase; 100.0 2.4E-36 8.1E-41 283.8 23.1 289 20-404 7-314 (325)
13 2q0l_A TRXR, thioredoxin reduc 100.0 2.3E-36 7.8E-41 282.1 22.1 286 21-402 1-309 (311)
14 4gcm_A TRXR, thioredoxin reduc 100.0 9.7E-37 3.3E-41 284.8 18.6 290 20-406 5-310 (312)
15 3r9u_A Thioredoxin reductase; 100.0 3.4E-36 1.2E-40 281.3 22.0 290 20-403 3-313 (315)
16 2zbw_A Thioredoxin reductase; 100.0 4.2E-36 1.5E-40 283.3 21.7 297 21-404 5-319 (335)
17 3cty_A Thioredoxin reductase; 100.0 4.6E-36 1.6E-40 281.1 20.9 286 20-403 15-317 (319)
18 4fk1_A Putative thioredoxin re 100.0 4.7E-36 1.6E-40 279.1 19.2 288 18-404 3-302 (304)
19 3ab1_A Ferredoxin--NADP reduct 100.0 1.7E-35 5.9E-40 282.0 23.2 300 20-405 13-331 (360)
20 2a87_A TRXR, TR, thioredoxin r 100.0 8.1E-36 2.8E-40 281.4 20.2 292 19-407 12-321 (335)
21 4a5l_A Thioredoxin reductase; 100.0 6.1E-36 2.1E-40 279.6 17.2 292 20-402 3-312 (314)
22 1fl2_A Alkyl hydroperoxide red 100.0 2.4E-35 8.2E-40 275.1 21.1 287 21-403 1-306 (310)
23 1vdc_A NTR, NADPH dependent th 100.0 2.8E-35 9.5E-40 277.5 21.7 292 20-407 7-328 (333)
24 3d1c_A Flavin-containing putat 100.0 7.8E-35 2.7E-39 278.4 22.5 309 21-402 4-339 (369)
25 1trb_A Thioredoxin reductase; 100.0 3.5E-35 1.2E-39 275.2 16.9 292 20-405 4-317 (320)
26 1hyu_A AHPF, alkyl hydroperoxi 100.0 1.4E-33 4.7E-38 280.7 25.8 290 19-404 210-518 (521)
27 4eqs_A Coenzyme A disulfide re 100.0 7.4E-35 2.5E-39 283.8 15.0 290 22-400 1-311 (437)
28 3oc4_A Oxidoreductase, pyridin 100.0 9.4E-34 3.2E-38 277.8 19.3 284 22-400 3-314 (452)
29 3klj_A NAD(FAD)-dependent dehy 100.0 1.5E-35 5.1E-40 283.6 3.6 273 20-400 8-294 (385)
30 3urh_A Dihydrolipoyl dehydroge 100.0 4.2E-34 1.4E-38 283.2 14.1 307 20-400 24-363 (491)
31 1mo9_A ORF3; nucleotide bindin 100.0 1.6E-33 5.4E-38 280.7 17.7 302 19-399 41-377 (523)
32 3lxd_A FAD-dependent pyridine 100.0 1.7E-34 5.9E-39 280.1 10.0 288 19-400 7-321 (415)
33 1zmd_A Dihydrolipoyl dehydroge 100.0 5.4E-33 1.8E-37 274.2 19.1 307 19-400 4-345 (474)
34 1ebd_A E3BD, dihydrolipoamide 100.0 9.7E-34 3.3E-38 278.0 13.4 302 20-399 2-332 (455)
35 3ef6_A Toluene 1,2-dioxygenase 100.0 9.2E-34 3.1E-38 274.3 12.7 284 20-400 1-309 (410)
36 3kd9_A Coenzyme A disulfide re 100.0 1.2E-33 4.1E-38 276.9 13.5 283 21-400 3-315 (449)
37 1xhc_A NADH oxidase /nitrite r 100.0 7.5E-35 2.6E-39 277.4 4.7 276 21-400 8-297 (367)
38 3ics_A Coenzyme A-disulfide re 100.0 1.4E-33 4.6E-38 285.7 13.9 292 19-399 34-352 (588)
39 3iwa_A FAD-dependent pyridine 100.0 1E-33 3.5E-38 279.2 12.6 296 21-400 3-329 (472)
40 2bc0_A NADH oxidase; flavoprot 100.0 1.7E-33 5.8E-38 278.6 14.1 288 20-400 34-361 (490)
41 1xdi_A RV3303C-LPDA; reductase 100.0 2.5E-33 8.5E-38 278.1 15.1 306 21-400 2-342 (499)
42 2wpf_A Trypanothione reductase 100.0 4.7E-33 1.6E-37 275.3 16.8 302 20-399 6-354 (495)
43 3ntd_A FAD-dependent pyridine 100.0 7.3E-34 2.5E-38 286.7 11.1 290 21-400 1-338 (565)
44 2qae_A Lipoamide, dihydrolipoy 100.0 6.4E-34 2.2E-38 280.3 10.3 306 20-400 1-340 (468)
45 3l8k_A Dihydrolipoyl dehydroge 100.0 6E-33 2.1E-37 273.0 16.8 297 21-400 4-333 (466)
46 1dxl_A Dihydrolipoamide dehydr 100.0 1.3E-32 4.3E-37 271.4 19.0 306 20-400 5-342 (470)
47 1ojt_A Surface protein; redox- 100.0 2.9E-33 1E-37 276.4 14.1 303 20-399 5-348 (482)
48 2gqw_A Ferredoxin reductase; f 100.0 4.2E-33 1.4E-37 269.4 14.8 281 19-400 5-308 (408)
49 1onf_A GR, grase, glutathione 100.0 7.6E-33 2.6E-37 274.4 16.6 302 20-399 1-370 (500)
50 1fec_A Trypanothione reductase 100.0 5E-33 1.7E-37 274.9 15.0 303 20-399 2-350 (490)
51 2vdc_G Glutamate synthase [NAD 100.0 3E-33 1E-37 272.8 12.7 278 20-405 121-447 (456)
52 1ges_A Glutathione reductase; 100.0 8.5E-33 2.9E-37 270.6 15.3 296 21-399 4-327 (450)
53 2hqm_A GR, grase, glutathione 100.0 3.9E-33 1.3E-37 275.2 12.9 299 20-400 10-347 (479)
54 1v59_A Dihydrolipoamide dehydr 100.0 1.5E-32 5.3E-37 271.3 16.7 300 20-399 4-349 (478)
55 3dk9_A Grase, GR, glutathione 100.0 8.8E-33 3E-37 272.9 14.8 300 19-400 18-356 (478)
56 2a8x_A Dihydrolipoyl dehydroge 100.0 1E-32 3.5E-37 271.5 15.0 302 21-399 3-333 (464)
57 4dna_A Probable glutathione re 100.0 1E-32 3.6E-37 271.2 14.0 299 20-400 4-331 (463)
58 2r9z_A Glutathione amide reduc 100.0 2.6E-32 8.8E-37 268.1 16.5 292 20-400 3-327 (463)
59 3fg2_P Putative rubredoxin red 100.0 1.6E-33 5.6E-38 272.2 7.8 282 22-400 2-310 (404)
60 3lad_A Dihydrolipoamide dehydr 100.0 2.2E-32 7.7E-37 270.0 16.1 306 20-400 2-343 (476)
61 3o0h_A Glutathione reductase; 100.0 7.2E-33 2.5E-37 273.8 12.6 299 21-400 26-351 (484)
62 2v3a_A Rubredoxin reductase; a 100.0 1.5E-32 5.3E-37 263.6 13.0 282 21-400 4-306 (384)
63 2eq6_A Pyruvate dehydrogenase 100.0 5.6E-32 1.9E-36 265.8 17.1 296 21-399 6-333 (464)
64 3ic9_A Dihydrolipoamide dehydr 100.0 1.2E-32 4E-37 272.4 12.3 299 21-400 8-338 (492)
65 4b1b_A TRXR, thioredoxin reduc 100.0 5.2E-32 1.8E-36 268.2 16.3 306 21-400 42-384 (542)
66 1q1r_A Putidaredoxin reductase 100.0 4.1E-33 1.4E-37 271.3 7.7 287 20-400 3-319 (431)
67 1zk7_A HGII, reductase, mercur 100.0 3.2E-32 1.1E-36 268.1 13.7 302 20-400 3-334 (467)
68 2yqu_A 2-oxoglutarate dehydrog 100.0 1.3E-31 4.6E-36 262.8 17.3 298 22-399 2-326 (455)
69 3dgh_A TRXR-1, thioredoxin red 100.0 6.7E-32 2.3E-36 266.9 15.2 304 19-400 7-352 (483)
70 3qfa_A Thioredoxin reductase 1 100.0 3.4E-32 1.2E-36 270.7 13.2 304 20-400 31-380 (519)
71 1lvl_A Dihydrolipoamide dehydr 100.0 4.7E-32 1.6E-36 266.0 13.6 295 20-399 4-329 (458)
72 2cdu_A NADPH oxidase; flavoenz 100.0 3.6E-32 1.2E-36 266.6 12.8 290 22-400 1-317 (452)
73 3dgz_A Thioredoxin reductase 2 100.0 4.2E-32 1.4E-36 268.6 12.1 305 19-400 4-352 (488)
74 3cgb_A Pyridine nucleotide-dis 100.0 7E-32 2.4E-36 266.3 12.2 288 21-399 36-352 (480)
75 3s5w_A L-ornithine 5-monooxyge 100.0 2.7E-30 9.2E-35 254.4 23.4 324 20-381 29-420 (463)
76 3h8l_A NADH oxidase; membrane 100.0 1.3E-32 4.3E-37 266.6 5.7 301 21-422 1-353 (409)
77 1nhp_A NADH peroxidase; oxidor 100.0 1.3E-31 4.4E-36 262.4 12.9 287 22-399 1-315 (447)
78 4b63_A L-ornithine N5 monooxyg 100.0 1.8E-30 6.1E-35 256.9 21.0 351 16-380 34-458 (501)
79 3sx6_A Sulfide-quinone reducta 100.0 5.6E-32 1.9E-36 264.1 7.7 306 21-422 4-362 (437)
80 2x8g_A Thioredoxin glutathione 100.0 1.8E-29 6E-34 255.9 18.3 303 19-400 105-459 (598)
81 4g6h_A Rotenone-insensitive NA 100.0 1.6E-30 5.5E-35 256.8 7.0 295 20-402 41-401 (502)
82 1lqt_A FPRA; NADP+ derivative, 100.0 1.8E-29 6.1E-34 246.5 10.0 294 21-404 3-389 (456)
83 1gte_A Dihydropyrimidine dehyd 100.0 7.6E-29 2.6E-33 264.0 15.2 279 20-403 186-509 (1025)
84 1cjc_A Protein (adrenodoxin re 100.0 7.3E-29 2.5E-33 242.4 12.1 304 20-403 5-396 (460)
85 3k30_A Histamine dehydrogenase 100.0 1.9E-29 6.4E-34 259.2 7.0 272 19-405 389-678 (690)
86 1m6i_A Programmed cell death p 100.0 2.1E-29 7.2E-34 249.0 7.1 300 20-400 10-352 (493)
87 3h28_A Sulfide-quinone reducta 100.0 1.9E-30 6.4E-35 252.8 -0.7 301 20-422 1-350 (430)
88 1o94_A Tmadh, trimethylamine d 99.9 1.1E-28 3.9E-33 254.3 6.7 279 19-402 387-700 (729)
89 3vrd_B FCCB subunit, flavocyto 99.9 7.7E-28 2.6E-32 232.4 11.1 288 22-405 3-327 (401)
90 2gag_A Heterotetrameric sarcos 99.9 6.9E-27 2.3E-31 247.4 17.2 282 20-402 127-444 (965)
91 1ps9_A 2,4-dienoyl-COA reducta 99.9 3.9E-27 1.3E-31 241.4 12.4 280 19-397 371-671 (671)
92 3hyw_A Sulfide-quinone reducta 99.9 1.3E-28 4.5E-33 239.5 0.1 302 20-421 1-349 (430)
93 1y56_A Hypothetical protein PH 99.9 6.8E-26 2.3E-30 223.9 6.7 254 20-401 107-376 (493)
94 2ywl_A Thioredoxin reductase r 99.7 6.8E-17 2.3E-21 137.6 8.4 160 193-403 3-172 (180)
95 3fpz_A Thiazole biosynthetic e 99.7 8.6E-20 2.9E-24 170.9 -11.7 150 21-224 65-216 (326)
96 2e5v_A L-aspartate oxidase; ar 99.6 1.7E-15 5.9E-20 148.5 6.9 193 23-231 1-248 (472)
97 2cul_A Glucose-inhibited divis 99.5 5E-14 1.7E-18 124.9 12.3 124 20-162 2-127 (232)
98 2gqf_A Hypothetical protein HI 99.5 4.7E-14 1.6E-18 135.2 11.4 134 21-162 4-170 (401)
99 2ywl_A Thioredoxin reductase r 99.4 3.9E-12 1.3E-16 108.0 11.3 118 21-170 1-118 (180)
100 3v76_A Flavoprotein; structura 99.4 5.1E-12 1.7E-16 121.5 12.9 133 20-162 26-189 (417)
101 3oz2_A Digeranylgeranylglycero 99.3 1.8E-11 6.2E-16 117.0 13.5 135 21-160 4-162 (397)
102 3cgv_A Geranylgeranyl reductas 99.3 1.5E-11 5E-16 117.9 12.6 134 21-160 4-162 (397)
103 1yvv_A Amine oxidase, flavin-c 99.3 6.2E-11 2.1E-15 110.9 15.2 131 20-160 1-162 (336)
104 3fmw_A Oxygenase; mithramycin, 99.3 2.8E-11 9.5E-16 121.1 13.2 136 19-160 47-207 (570)
105 3ces_A MNMG, tRNA uridine 5-ca 99.3 1E-11 3.5E-16 123.8 9.7 172 20-222 27-221 (651)
106 2i0z_A NAD(FAD)-utilizing dehy 99.2 1.9E-11 6.4E-16 119.1 10.0 137 17-162 22-193 (447)
107 3qj4_A Renalase; FAD/NAD(P)-bi 99.2 1.3E-11 4.4E-16 116.0 7.9 129 21-158 1-163 (342)
108 3nix_A Flavoprotein/dehydrogen 99.2 1.2E-10 4E-15 112.6 14.3 135 21-160 5-166 (421)
109 2qa1_A PGAE, polyketide oxygen 99.2 1.6E-10 5.5E-15 114.0 14.2 138 18-161 8-166 (500)
110 3rp8_A Flavoprotein monooxygen 99.2 4.5E-11 1.5E-15 115.1 9.3 133 19-162 21-183 (407)
111 2bry_A NEDD9 interacting prote 99.2 2.2E-11 7.4E-16 120.1 7.0 141 19-162 90-232 (497)
112 3i3l_A Alkylhalidase CMLS; fla 99.2 1.7E-10 6E-15 115.6 12.9 135 21-160 23-188 (591)
113 2qa2_A CABE, polyketide oxygen 99.1 2.3E-10 7.9E-15 112.8 12.9 137 19-161 10-167 (499)
114 2zxi_A TRNA uridine 5-carboxym 99.1 8.1E-11 2.8E-15 117.0 9.3 172 20-222 26-220 (637)
115 3nlc_A Uncharacterized protein 99.1 4.7E-10 1.6E-14 110.9 14.0 133 20-160 106-277 (549)
116 3dje_A Fructosyl amine: oxygen 99.1 3E-10 1E-14 110.4 12.5 63 93-164 159-225 (438)
117 2gmh_A Electron transfer flavo 99.1 7.8E-10 2.7E-14 111.1 15.8 139 19-160 33-217 (584)
118 2uzz_A N-methyl-L-tryptophan o 99.1 3.5E-10 1.2E-14 107.3 12.5 63 93-165 147-209 (372)
119 3e1t_A Halogenase; flavoprotei 99.1 8.9E-10 3E-14 109.2 15.5 137 20-161 6-173 (512)
120 3cp8_A TRNA uridine 5-carboxym 99.1 7.7E-11 2.6E-15 117.5 7.6 173 19-222 19-215 (641)
121 3ihg_A RDME; flavoenzyme, anth 99.1 5E-10 1.7E-14 111.6 13.3 135 20-160 4-183 (535)
122 1ryi_A Glycine oxidase; flavop 99.1 5.6E-10 1.9E-14 106.3 12.0 61 91-161 160-220 (382)
123 3alj_A 2-methyl-3-hydroxypyrid 99.1 6.2E-10 2.1E-14 106.0 11.9 125 21-160 11-160 (379)
124 1k0i_A P-hydroxybenzoate hydro 99.1 2.1E-10 7.3E-15 109.8 8.7 136 20-162 1-165 (394)
125 3atr_A Conserved archaeal prot 99.1 3.6E-10 1.2E-14 110.3 10.4 136 20-161 5-163 (453)
126 1y0p_A Fumarate reductase flav 99.1 1.5E-09 5.1E-14 109.0 14.7 139 20-161 125-318 (571)
127 3ps9_A TRNA 5-methylaminomethy 99.1 9.6E-10 3.3E-14 112.7 13.2 60 93-161 415-474 (676)
128 2xdo_A TETX2 protein; tetracyc 99.1 6E-10 2E-14 106.8 11.0 130 21-161 26-183 (398)
129 2x3n_A Probable FAD-dependent 99.1 3.9E-10 1.3E-14 108.1 9.6 132 21-161 6-167 (399)
130 3nyc_A D-arginine dehydrogenas 99.0 7.4E-10 2.5E-14 105.3 10.8 59 93-161 152-210 (381)
131 3dme_A Conserved exported prot 99.0 7E-10 2.4E-14 104.9 10.5 63 93-161 148-210 (369)
132 1rp0_A ARA6, thiazole biosynth 99.0 1.3E-09 4.3E-14 99.4 11.2 137 20-158 38-189 (284)
133 1qo8_A Flavocytochrome C3 fuma 99.0 3.9E-09 1.3E-13 105.8 15.3 139 20-161 120-313 (566)
134 2vou_A 2,6-dihydroxypyridine h 99.0 1.4E-09 4.6E-14 104.3 10.9 130 20-161 4-154 (397)
135 2gf3_A MSOX, monomeric sarcosi 99.0 2E-09 6.9E-14 102.7 11.8 59 93-161 148-206 (389)
136 3pvc_A TRNA 5-methylaminomethy 99.0 3.8E-09 1.3E-13 108.4 14.0 61 93-162 410-471 (689)
137 2r0c_A REBC; flavin adenine di 99.0 9.4E-09 3.2E-13 102.6 16.4 134 21-161 26-197 (549)
138 3c96_A Flavin-containing monoo 99.0 4.6E-09 1.6E-13 101.1 13.7 136 21-161 4-170 (410)
139 3da1_A Glycerol-3-phosphate de 99.0 3.7E-09 1.3E-13 105.7 13.4 65 93-160 168-232 (561)
140 1y56_B Sarcosine oxidase; dehy 99.0 3.1E-09 1.1E-13 101.1 12.0 58 93-160 147-205 (382)
141 2gag_B Heterotetrameric sarcos 99.0 3.2E-09 1.1E-13 101.9 11.4 60 92-160 171-230 (405)
142 2dkh_A 3-hydroxybenzoate hydro 98.9 6.4E-09 2.2E-13 105.7 14.0 138 21-161 32-212 (639)
143 3jsk_A Cypbp37 protein; octame 98.9 2.3E-09 7.9E-14 99.0 9.5 106 20-125 78-191 (344)
144 4hb9_A Similarities with proba 98.9 5.1E-09 1.8E-13 100.5 10.9 128 23-161 3-167 (412)
145 2oln_A NIKD protein; flavoprot 98.9 5.5E-09 1.9E-13 100.0 11.0 57 94-160 152-208 (397)
146 4at0_A 3-ketosteroid-delta4-5a 98.9 1.4E-08 4.7E-13 100.5 14.0 61 96-160 203-264 (510)
147 1d4d_A Flavocytochrome C fumar 98.9 3E-08 1E-12 99.4 15.7 139 20-161 125-318 (572)
148 3kkj_A Amine oxidase, flavin-c 98.9 2.4E-09 8.4E-14 96.7 7.1 51 20-70 1-51 (336)
149 1pn0_A Phenol 2-monooxygenase; 98.9 2.6E-08 8.8E-13 101.5 14.9 140 20-161 7-231 (665)
150 2gjc_A Thiazole biosynthetic e 98.8 1.8E-08 6E-13 92.6 11.9 105 21-125 65-177 (326)
151 4dgk_A Phytoene dehydrogenase; 98.8 5E-09 1.7E-13 103.5 8.9 40 21-60 1-40 (501)
152 2qcu_A Aerobic glycerol-3-phos 98.8 3.2E-08 1.1E-12 97.7 14.5 65 93-161 147-211 (501)
153 2weu_A Tryptophan 5-halogenase 98.8 8.2E-09 2.8E-13 102.3 9.3 62 92-161 170-231 (511)
154 3ka7_A Oxidoreductase; structu 98.8 1.5E-08 5.1E-13 97.9 10.7 40 22-61 1-40 (425)
155 2aqj_A Tryptophan halogenase, 98.8 7.6E-09 2.6E-13 103.1 8.5 61 93-161 163-223 (538)
156 3k7m_X 6-hydroxy-L-nicotine ox 98.8 1.9E-08 6.4E-13 97.4 10.8 40 21-60 1-40 (431)
157 3c4n_A Uncharacterized protein 98.8 5E-09 1.7E-13 100.6 5.9 130 21-160 36-236 (405)
158 3nrn_A Uncharacterized protein 98.8 1.1E-08 3.7E-13 98.8 8.2 41 22-62 1-41 (421)
159 2yqu_A 2-oxoglutarate dehydrog 98.7 5.1E-08 1.7E-12 95.1 11.2 100 21-164 167-266 (455)
160 2rgh_A Alpha-glycerophosphate 98.7 6.9E-08 2.3E-12 96.7 12.0 66 93-161 186-251 (571)
161 3i6d_A Protoporphyrinogen oxid 98.7 2.6E-08 8.9E-13 97.4 8.8 40 20-59 4-49 (470)
162 2e4g_A Tryptophan halogenase; 98.7 2.7E-08 9.1E-13 99.4 8.8 62 92-161 191-253 (550)
163 2wdq_A Succinate dehydrogenase 98.7 1.7E-07 5.7E-12 94.1 14.4 140 20-161 6-207 (588)
164 3nks_A Protoporphyrinogen oxid 98.7 5E-08 1.7E-12 95.7 10.1 42 20-61 1-44 (477)
165 2pyx_A Tryptophan halogenase; 98.7 7.5E-08 2.6E-12 95.6 11.3 62 92-161 172-234 (526)
166 1pj5_A N,N-dimethylglycine oxi 98.7 8.1E-08 2.8E-12 100.7 11.4 58 93-160 149-207 (830)
167 2v3a_A Rubredoxin reductase; a 98.6 1.5E-07 5.3E-12 89.5 11.8 100 21-163 145-244 (384)
168 2h88_A Succinate dehydrogenase 98.6 3.6E-07 1.2E-11 92.0 13.8 138 20-161 17-218 (621)
169 3axb_A Putative oxidoreductase 98.6 1.1E-07 3.9E-12 92.4 9.6 61 93-161 179-255 (448)
170 1kf6_A Fumarate reductase flav 98.6 4.7E-07 1.6E-11 91.0 14.2 139 20-162 4-199 (602)
171 1chu_A Protein (L-aspartate ox 98.6 1.4E-07 4.8E-12 93.7 9.6 38 20-58 7-44 (540)
172 3lov_A Protoporphyrinogen oxid 98.6 3.8E-07 1.3E-11 89.3 12.1 41 21-61 4-46 (475)
173 2eq6_A Pyruvate dehydrogenase 98.5 3.8E-07 1.3E-11 89.1 11.8 105 21-165 169-274 (464)
174 1ebd_A E3BD, dihydrolipoamide 98.5 5.2E-07 1.8E-11 87.9 12.6 103 21-164 170-272 (455)
175 1nhp_A NADH peroxidase; oxidor 98.5 1.8E-07 6.3E-12 90.9 9.2 102 20-165 148-249 (447)
176 1v59_A Dihydrolipoamide dehydr 98.5 1E-06 3.5E-11 86.4 14.2 107 21-164 183-289 (478)
177 2bs2_A Quinol-fumarate reducta 98.5 7E-07 2.4E-11 90.5 13.2 64 94-161 157-221 (660)
178 2r9z_A Glutathione amide reduc 98.5 6.2E-07 2.1E-11 87.5 12.3 100 21-164 166-266 (463)
179 3c4a_A Probable tryptophan hyd 98.5 1.6E-08 5.4E-13 96.3 0.9 119 22-161 1-144 (381)
180 1ges_A Glutathione reductase; 98.5 5.6E-07 1.9E-11 87.5 11.8 102 21-165 167-268 (450)
181 4b1b_A TRXR, thioredoxin reduc 98.5 8.7E-07 3E-11 87.7 12.6 100 20-164 222-321 (542)
182 1jnr_A Adenylylsulfate reducta 98.5 1.3E-06 4.5E-11 88.6 14.2 145 19-165 20-223 (643)
183 1zk7_A HGII, reductase, mercur 98.5 9.1E-07 3.1E-11 86.5 12.6 98 21-164 176-273 (467)
184 3lxd_A FAD-dependent pyridine 98.5 9.1E-07 3.1E-11 85.1 12.0 102 21-164 152-253 (415)
185 1lvl_A Dihydrolipoamide dehydr 98.4 5.4E-07 1.9E-11 87.8 9.9 101 21-165 171-271 (458)
186 1xdi_A RV3303C-LPDA; reductase 98.4 2.7E-06 9.1E-11 83.9 14.9 100 21-164 182-281 (499)
187 4gde_A UDP-galactopyranose mut 98.4 2.7E-07 9.1E-12 91.3 7.8 44 19-62 8-52 (513)
188 1rp0_A ARA6, thiazole biosynth 98.4 7.7E-08 2.6E-12 87.6 3.5 190 192-402 40-275 (284)
189 3fg2_P Putative rubredoxin red 98.4 1.2E-06 4.1E-11 83.9 11.8 102 21-164 142-243 (404)
190 3cgb_A Pyridine nucleotide-dis 98.4 1.2E-06 4.3E-11 85.8 12.1 99 20-163 185-283 (480)
191 3oc4_A Oxidoreductase, pyridin 98.4 1.7E-06 5.8E-11 84.2 12.9 101 21-165 147-247 (452)
192 3ic9_A Dihydrolipoamide dehydr 98.4 3.4E-06 1.2E-10 82.9 15.2 104 21-165 174-277 (492)
193 2gqw_A Ferredoxin reductase; f 98.4 9.8E-07 3.3E-11 84.6 11.0 96 21-163 145-240 (408)
194 1zmd_A Dihydrolipoyl dehydroge 98.4 1.5E-06 5.2E-11 85.0 12.4 107 21-164 178-284 (474)
195 3gyx_A Adenylylsulfate reducta 98.4 9.4E-07 3.2E-11 89.5 10.9 37 20-56 21-63 (662)
196 1q1r_A Putidaredoxin reductase 98.4 1.2E-06 4E-11 84.7 11.1 101 21-163 149-251 (431)
197 2hqm_A GR, grase, glutathione 98.4 1.6E-06 5.5E-11 85.0 12.2 103 21-164 185-287 (479)
198 3ef6_A Toluene 1,2-dioxygenase 98.4 3.3E-07 1.1E-11 88.0 7.2 100 21-163 143-242 (410)
199 2a8x_A Dihydrolipoyl dehydroge 98.4 1.9E-06 6.5E-11 84.1 12.6 103 21-164 171-273 (464)
200 1onf_A GR, grase, glutathione 98.4 1.9E-06 6.6E-11 84.9 12.7 102 21-164 176-277 (500)
201 1mo9_A ORF3; nucleotide bindin 98.4 1.8E-06 6.2E-11 85.5 12.3 101 22-164 215-318 (523)
202 3urh_A Dihydrolipoyl dehydroge 98.4 2.5E-06 8.7E-11 83.8 13.2 106 21-165 198-303 (491)
203 1dxl_A Dihydrolipoamide dehydr 98.4 2.3E-06 7.9E-11 83.6 12.7 105 21-164 177-281 (470)
204 2qae_A Lipoamide, dihydrolipoy 98.4 2.2E-06 7.6E-11 83.7 12.6 104 21-164 174-278 (468)
205 2cdu_A NADPH oxidase; flavoenz 98.4 1.7E-06 5.9E-11 84.1 11.7 102 20-164 148-249 (452)
206 3iwa_A FAD-dependent pyridine 98.4 1.6E-06 5.6E-11 84.7 11.2 100 21-163 159-259 (472)
207 1xhc_A NADH oxidase /nitrite r 98.4 7.1E-07 2.4E-11 84.3 8.0 93 22-164 144-236 (367)
208 1fec_A Trypanothione reductase 98.3 2.1E-06 7.3E-11 84.3 11.4 101 21-164 187-290 (490)
209 2wpf_A Trypanothione reductase 98.3 2.4E-06 8.2E-11 84.0 11.6 101 21-164 191-294 (495)
210 4gut_A Lysine-specific histone 98.3 1.9E-06 6.4E-11 88.8 11.0 39 20-58 335-373 (776)
211 3o0h_A Glutathione reductase; 98.3 2.5E-06 8.7E-11 83.7 11.5 100 21-164 191-290 (484)
212 3s5w_A L-ornithine 5-monooxyge 98.3 3.7E-06 1.3E-10 82.0 12.6 132 21-163 227-378 (463)
213 2bc0_A NADH oxidase; flavoprot 98.3 1.5E-06 5.2E-11 85.4 9.8 101 20-164 193-293 (490)
214 3ntd_A FAD-dependent pyridine 98.3 2.7E-06 9.2E-11 85.2 11.8 101 21-163 151-268 (565)
215 4eqs_A Coenzyme A disulfide re 98.3 1.6E-06 5.4E-11 83.9 9.6 96 21-164 147-242 (437)
216 2bcg_G Secretory pathway GDP d 98.3 4.8E-07 1.6E-11 88.0 5.9 44 20-63 10-53 (453)
217 1m6i_A Programmed cell death p 98.3 3.1E-06 1.1E-10 83.2 11.5 101 21-164 180-284 (493)
218 2b9w_A Putative aminooxidase; 98.3 8.6E-07 2.9E-11 85.4 7.3 48 20-67 5-53 (424)
219 3lad_A Dihydrolipoamide dehydr 98.3 5E-06 1.7E-10 81.4 12.6 103 21-164 180-282 (476)
220 1ojt_A Surface protein; redox- 98.3 1.7E-06 5.8E-11 84.9 9.1 104 21-164 185-288 (482)
221 3dgz_A Thioredoxin reductase 2 98.3 8.9E-06 3E-10 79.8 13.9 105 21-164 185-289 (488)
222 3klj_A NAD(FAD)-dependent dehy 98.3 1.8E-06 6.3E-11 81.9 8.3 108 190-344 8-119 (385)
223 3dk9_A Grase, GR, glutathione 98.3 6.3E-06 2.2E-10 80.7 12.3 107 21-164 187-295 (478)
224 3dgh_A TRXR-1, thioredoxin red 98.2 8.9E-06 3.1E-10 79.7 13.1 105 21-164 187-291 (483)
225 3hyw_A Sulfide-quinone reducta 98.2 1.4E-06 5E-11 84.0 7.3 103 192-342 3-110 (430)
226 2cul_A Glucose-inhibited divis 98.2 1.7E-06 5.8E-11 76.1 6.9 174 192-401 4-231 (232)
227 4dna_A Probable glutathione re 98.2 9.4E-06 3.2E-10 79.1 12.9 100 21-164 170-270 (463)
228 3qfa_A Thioredoxin reductase 1 98.2 1.5E-05 5.2E-10 78.8 14.0 106 21-164 210-317 (519)
229 3hdq_A UDP-galactopyranose mut 98.2 1.1E-06 3.7E-11 83.4 5.3 44 20-63 28-71 (397)
230 2e1m_A L-glutamate oxidase; L- 98.2 9.6E-07 3.3E-11 83.0 4.9 44 20-63 43-87 (376)
231 1trb_A Thioredoxin reductase; 98.2 7.3E-06 2.5E-10 75.5 10.7 103 21-164 145-249 (320)
232 2zbw_A Thioredoxin reductase; 98.2 9.7E-06 3.3E-10 75.2 11.4 103 21-164 152-254 (335)
233 3sx6_A Sulfide-quinone reducta 98.2 2.4E-06 8.1E-11 82.7 7.3 104 192-343 5-114 (437)
234 1rsg_A FMS1 protein; FAD bindi 98.2 1E-06 3.5E-11 87.3 4.6 43 20-62 7-50 (516)
235 3ics_A Coenzyme A-disulfide re 98.2 5.5E-06 1.9E-10 83.3 9.9 98 21-164 187-284 (588)
236 1v0j_A UDP-galactopyranose mut 98.2 1.6E-06 5.6E-11 82.7 5.7 45 21-65 7-52 (399)
237 2ivd_A PPO, PPOX, protoporphyr 98.1 2E-06 6.9E-11 84.2 6.1 44 19-62 14-57 (478)
238 3d1c_A Flavin-containing putat 98.1 8.3E-06 2.9E-10 76.8 10.1 108 21-164 166-274 (369)
239 1s3e_A Amine oxidase [flavin-c 98.1 2.6E-06 9E-11 84.4 6.7 42 20-61 3-44 (520)
240 3ihm_A Styrene monooxygenase A 98.1 1.1E-06 3.9E-11 84.7 3.7 40 15-54 16-55 (430)
241 3fbs_A Oxidoreductase; structu 98.1 6E-06 2E-10 75.1 8.3 33 192-224 3-35 (297)
242 3kd9_A Coenzyme A disulfide re 98.1 8.9E-06 3.1E-10 78.9 9.8 98 21-163 148-245 (449)
243 4dsg_A UDP-galactopyranose mut 98.1 4E-06 1.4E-10 82.2 7.3 52 20-71 8-61 (484)
244 2yg5_A Putrescine oxidase; oxi 98.1 2.4E-06 8.1E-11 83.1 5.6 43 20-62 4-46 (453)
245 3h8l_A NADH oxidase; membrane 98.1 6.4E-06 2.2E-10 78.9 8.2 104 192-343 2-115 (409)
246 2vvm_A Monoamine oxidase N; FA 98.1 3.7E-06 1.3E-10 82.7 6.4 41 22-62 40-80 (495)
247 3ab1_A Ferredoxin--NADP reduct 98.1 1.2E-05 4.2E-10 75.4 9.5 102 21-164 163-265 (360)
248 2x8g_A Thioredoxin glutathione 98.0 4.4E-05 1.5E-09 76.9 13.9 105 21-164 286-397 (598)
249 2jae_A L-amino acid oxidase; o 98.0 2.9E-06 1E-10 83.3 5.1 41 20-60 10-50 (489)
250 1sez_A Protoporphyrinogen oxid 98.0 3.3E-06 1.1E-10 83.3 5.5 45 20-64 12-56 (504)
251 1i8t_A UDP-galactopyranose mut 98.0 3.2E-06 1.1E-10 79.8 4.9 42 22-63 2-43 (367)
252 3vrd_B FCCB subunit, flavocyto 98.0 4.7E-06 1.6E-10 79.6 6.2 105 190-343 1-110 (401)
253 4g6h_A Rotenone-insensitive NA 98.0 1.4E-05 4.9E-10 78.5 9.2 99 22-158 218-330 (502)
254 3h28_A Sulfide-quinone reducta 98.0 1.3E-05 4.3E-10 77.4 8.7 105 192-344 3-112 (430)
255 2bi7_A UDP-galactopyranose mut 98.0 4.7E-06 1.6E-10 79.1 4.7 45 21-65 3-47 (384)
256 3l8k_A Dihydrolipoyl dehydroge 97.9 4.8E-05 1.6E-09 74.1 11.5 104 21-165 172-275 (466)
257 1b37_A Protein (polyamine oxid 97.9 9.3E-06 3.2E-10 79.4 6.3 44 20-63 3-47 (472)
258 1d5t_A Guanine nucleotide diss 97.9 9.1E-06 3.1E-10 78.5 6.0 44 20-63 5-48 (433)
259 3itj_A Thioredoxin reductase 1 97.9 4.6E-05 1.6E-09 70.6 10.5 100 21-163 173-272 (338)
260 2q7v_A Thioredoxin reductase; 97.9 3.5E-05 1.2E-09 71.1 9.3 100 21-164 152-251 (325)
261 3f8d_A Thioredoxin reductase ( 97.9 5.4E-05 1.9E-09 69.5 10.3 100 20-163 153-252 (323)
262 1fl2_A Alkyl hydroperoxide red 97.9 6.1E-05 2.1E-09 69.0 10.5 99 21-163 144-243 (310)
263 2q0l_A TRXR, thioredoxin reduc 97.9 4.1E-05 1.4E-09 70.2 9.2 101 21-164 143-243 (311)
264 3cty_A Thioredoxin reductase; 97.9 5.9E-05 2E-09 69.4 10.3 98 21-163 155-253 (319)
265 3lzw_A Ferredoxin--NADP reduct 97.9 6.1E-05 2.1E-09 69.5 10.0 99 21-164 154-252 (332)
266 2iid_A L-amino-acid oxidase; f 97.8 9.7E-06 3.3E-10 79.8 4.6 42 20-61 32-73 (498)
267 3r9u_A Thioredoxin reductase; 97.8 9.1E-05 3.1E-09 67.8 10.9 100 21-164 147-246 (315)
268 3p1w_A Rabgdi protein; GDI RAB 97.8 1.2E-05 4.1E-10 77.8 4.8 43 20-62 19-61 (475)
269 1c0p_A D-amino acid oxidase; a 97.8 1.3E-05 4.6E-10 75.3 5.0 35 20-54 5-39 (363)
270 2a87_A TRXR, TR, thioredoxin r 97.8 9.4E-05 3.2E-09 68.6 10.5 101 21-165 155-255 (335)
271 3k30_A Histamine dehydrogenase 97.8 1.6E-05 5.6E-10 81.4 5.7 101 21-163 523-625 (690)
272 1vdc_A NTR, NADPH dependent th 97.8 8.4E-05 2.9E-09 68.8 9.7 102 21-164 159-261 (333)
273 3g5s_A Methylenetetrahydrofola 97.8 2.5E-05 8.7E-10 72.7 5.8 36 21-56 1-36 (443)
274 4a9w_A Monooxygenase; baeyer-v 97.8 4.2E-05 1.4E-09 71.4 7.2 33 192-224 4-36 (357)
275 3v76_A Flavoprotein; structura 97.7 3.5E-05 1.2E-09 73.8 6.2 135 191-342 27-188 (417)
276 4fk1_A Putative thioredoxin re 97.7 5.1E-05 1.8E-09 69.4 6.9 32 193-224 8-39 (304)
277 2bry_A NEDD9 interacting prote 97.7 7.4E-05 2.5E-09 73.3 7.7 129 190-344 91-233 (497)
278 3nlc_A Uncharacterized protein 97.6 8.9E-05 3E-09 73.3 7.8 35 190-224 106-140 (549)
279 3g3e_A D-amino-acid oxidase; F 97.6 2.2E-05 7.4E-10 73.5 3.2 34 22-55 1-40 (351)
280 2z3y_A Lysine-specific histone 97.6 3.4E-05 1.2E-09 78.6 4.8 43 20-62 106-148 (662)
281 3pl8_A Pyranose 2-oxidase; sub 97.6 3.5E-05 1.2E-09 77.7 4.6 40 21-60 46-85 (623)
282 2xag_A Lysine-specific histone 97.6 4.1E-05 1.4E-09 79.6 5.0 42 20-61 277-318 (852)
283 1hyu_A AHPF, alkyl hydroperoxi 97.6 0.00025 8.5E-09 70.1 10.1 100 21-164 355-455 (521)
284 4a5l_A Thioredoxin reductase; 97.6 0.00012 4E-09 67.1 7.2 101 21-164 152-252 (314)
285 3alj_A 2-methyl-3-hydroxypyrid 97.6 0.00018 6.1E-09 68.0 8.5 140 191-342 11-161 (379)
286 2xve_A Flavin-containing monoo 97.5 0.00018 6.3E-09 69.9 8.2 35 21-55 197-231 (464)
287 2gqf_A Hypothetical protein HI 97.5 0.00017 5.8E-09 68.7 7.5 33 192-224 5-37 (401)
288 2i0z_A NAD(FAD)-utilizing dehy 97.5 0.00014 4.6E-09 70.5 6.8 149 192-342 27-192 (447)
289 4gcm_A TRXR, thioredoxin reduc 97.4 0.00074 2.5E-08 61.7 10.3 35 21-55 145-179 (312)
290 2gv8_A Monooxygenase; FMO, FAD 97.4 0.00042 1.4E-08 67.0 9.0 34 21-54 212-246 (447)
291 2vdc_G Glutamate synthase [NAD 97.4 0.00028 9.7E-09 68.3 7.4 34 21-54 264-298 (456)
292 2gag_A Heterotetrameric sarcos 97.4 0.00054 1.8E-08 72.7 10.1 98 21-164 284-385 (965)
293 3jsk_A Cypbp37 protein; octame 97.4 0.0003 1E-08 64.8 7.2 33 192-224 80-114 (344)
294 3k7m_X 6-hydroxy-L-nicotine ox 97.4 0.0005 1.7E-08 66.0 8.9 32 193-224 3-34 (431)
295 1kdg_A CDH, cellobiose dehydro 97.3 0.00014 4.8E-09 72.3 4.5 36 19-54 5-40 (546)
296 3ces_A MNMG, tRNA uridine 5-ca 97.3 0.00059 2E-08 68.3 8.5 33 192-224 29-61 (651)
297 1o94_A Tmadh, trimethylamine d 97.3 0.0002 7E-09 73.6 5.3 104 21-163 528-647 (729)
298 2x3n_A Probable FAD-dependent 97.3 0.00063 2.2E-08 64.6 8.4 33 192-224 7-39 (399)
299 3uox_A Otemo; baeyer-villiger 97.3 0.00022 7.5E-09 70.8 5.3 34 191-224 9-42 (545)
300 2gjc_A Thiazole biosynthetic e 97.3 0.00036 1.2E-08 63.9 6.1 32 193-224 67-100 (326)
301 1vg0_A RAB proteins geranylger 97.2 0.00033 1.1E-08 70.1 6.0 45 19-63 6-50 (650)
302 3t37_A Probable dehydrogenase; 97.2 0.00015 5.3E-09 71.7 3.5 35 20-54 16-51 (526)
303 1y0p_A Fumarate reductase flav 97.2 0.0011 3.6E-08 66.3 9.6 34 191-224 126-159 (571)
304 4ap3_A Steroid monooxygenase; 97.2 0.00044 1.5E-08 68.6 6.6 33 192-224 22-54 (549)
305 3gwf_A Cyclohexanone monooxyge 97.2 0.00044 1.5E-08 68.5 6.6 33 192-224 9-42 (540)
306 1ps9_A 2,4-dienoyl-COA reducta 97.2 0.00082 2.8E-08 68.5 8.6 127 21-163 494-629 (671)
307 3fmw_A Oxygenase; mithramycin, 97.2 0.00011 3.8E-09 73.3 1.9 33 192-224 50-82 (570)
308 4hb9_A Similarities with proba 97.1 0.00039 1.3E-08 66.1 5.5 32 193-224 3-34 (412)
309 2zxi_A TRNA uridine 5-carboxym 97.1 0.00098 3.3E-08 66.4 8.2 143 192-343 28-182 (637)
310 3ayj_A Pro-enzyme of L-phenyla 97.1 0.00014 4.7E-09 73.7 2.1 36 21-56 56-100 (721)
311 1ju2_A HydroxynitrIle lyase; f 97.1 0.00022 7.6E-09 70.6 3.5 36 20-56 25-60 (536)
312 2vou_A 2,6-dihydroxypyridine h 97.1 0.00092 3.1E-08 63.5 7.5 35 191-225 5-39 (397)
313 3nix_A Flavoprotein/dehydrogen 97.1 0.00021 7.3E-09 68.4 2.8 33 192-224 6-38 (421)
314 3cp8_A TRNA uridine 5-carboxym 97.0 0.0011 3.8E-08 66.2 7.6 34 191-224 21-54 (641)
315 1qo8_A Flavocytochrome C3 fuma 97.0 0.0013 4.3E-08 65.7 8.0 33 192-224 122-154 (566)
316 3i3l_A Alkylhalidase CMLS; fla 97.0 0.00085 2.9E-08 67.1 6.6 146 191-341 23-188 (591)
317 1gte_A Dihydropyrimidine dehyd 97.0 0.004 1.4E-07 66.5 11.9 99 21-158 332-440 (1025)
318 1lqt_A FPRA; NADP+ derivative, 97.0 0.0032 1.1E-07 60.9 10.3 35 21-55 147-202 (456)
319 1k0i_A P-hydroxybenzoate hydro 97.0 0.0012 4E-08 62.6 7.0 33 192-224 3-35 (394)
320 1cjc_A Protein (adrenodoxin re 97.0 0.0039 1.3E-07 60.4 10.6 35 21-55 145-200 (460)
321 3rp8_A Flavoprotein monooxygen 97.0 0.00023 7.9E-09 67.9 1.9 35 190-224 22-56 (407)
322 1y56_B Sarcosine oxidase; dehy 96.9 0.0017 5.7E-08 61.2 7.5 33 192-224 6-38 (382)
323 3q9t_A Choline dehydrogenase a 96.9 0.00053 1.8E-08 68.3 3.7 36 20-55 5-41 (577)
324 3e1t_A Halogenase; flavoprotei 96.9 0.0011 3.6E-08 65.4 5.8 33 192-224 8-40 (512)
325 3nrn_A Uncharacterized protein 96.8 0.0084 2.9E-07 57.2 11.8 50 292-341 190-243 (421)
326 3dme_A Conserved exported prot 96.8 0.0017 5.8E-08 60.6 6.7 33 192-224 5-37 (369)
327 2xdo_A TETX2 protein; tetracyc 96.8 0.0019 6.6E-08 61.3 6.8 34 191-224 26-59 (398)
328 1n4w_A CHOD, cholesterol oxida 96.8 0.00097 3.3E-08 65.5 4.8 37 20-56 4-40 (504)
329 3qj4_A Renalase; FAD/NAD(P)-bi 96.8 0.00059 2E-08 63.4 3.0 33 192-224 2-37 (342)
330 3qvp_A Glucose oxidase; oxidor 96.7 0.00075 2.6E-08 67.2 3.7 36 19-54 17-53 (583)
331 3fwz_A Inner membrane protein 96.7 0.002 7E-08 51.2 5.5 36 19-54 5-40 (140)
332 1d4d_A Flavocytochrome C fumar 96.7 0.0031 1.1E-07 62.9 7.8 34 191-224 126-159 (572)
333 1coy_A Cholesterol oxidase; ox 96.7 0.0011 3.7E-08 65.2 4.4 36 19-54 9-44 (507)
334 4at0_A 3-ketosteroid-delta4-5a 96.7 0.0029 1E-07 62.2 7.3 33 192-224 42-74 (510)
335 1yvv_A Amine oxidase, flavin-c 96.6 0.007 2.4E-07 55.7 9.1 33 192-224 3-35 (336)
336 3atr_A Conserved archaeal prot 96.6 0.0033 1.1E-07 60.8 7.0 33 192-224 7-39 (453)
337 3pvc_A TRNA 5-methylaminomethy 96.6 0.011 3.7E-07 60.5 11.1 34 191-224 264-297 (689)
338 3dfz_A SIRC, precorrin-2 dehyd 96.6 0.0032 1.1E-07 54.2 6.0 36 189-224 29-64 (223)
339 1ryi_A Glycine oxidase; flavop 96.6 0.0012 4.2E-08 62.1 3.7 34 191-224 17-50 (382)
340 2qa2_A CABE, polyketide oxygen 96.6 0.0006 2.1E-08 66.9 1.5 34 191-224 12-45 (499)
341 2gag_B Heterotetrameric sarcos 96.5 0.0044 1.5E-07 58.7 7.4 34 191-224 21-56 (405)
342 2qa1_A PGAE, polyketide oxygen 96.5 0.00065 2.2E-08 66.6 1.2 34 191-224 11-44 (500)
343 3cgv_A Geranylgeranyl reductas 96.5 0.0015 5.3E-08 61.7 3.8 33 192-224 5-37 (397)
344 3fim_B ARYL-alcohol oxidase; A 96.4 0.00099 3.4E-08 66.2 2.3 35 21-55 2-37 (566)
345 3ihg_A RDME; flavoenzyme, anth 96.4 0.013 4.4E-07 57.9 10.3 33 192-224 6-38 (535)
346 1w4x_A Phenylacetone monooxyge 96.4 0.0056 1.9E-07 60.6 7.6 33 192-224 17-49 (542)
347 2jbv_A Choline oxidase; alcoho 96.4 0.0016 5.6E-08 64.5 3.6 36 20-55 12-48 (546)
348 3ps9_A TRNA 5-methylaminomethy 96.4 0.0063 2.2E-07 62.0 8.0 34 191-224 272-305 (676)
349 1gpe_A Protein (glucose oxidas 96.4 0.002 6.9E-08 64.4 4.1 35 20-54 23-58 (587)
350 2aqj_A Tryptophan halogenase, 96.2 0.01 3.5E-07 58.7 8.4 34 191-224 5-41 (538)
351 2g1u_A Hypothetical protein TM 96.2 0.0041 1.4E-07 50.4 4.2 35 20-54 18-52 (155)
352 2pyx_A Tryptophan halogenase; 96.1 0.03 1E-06 55.1 11.1 34 191-224 7-52 (526)
353 3llv_A Exopolyphosphatase-rela 96.1 0.0066 2.3E-07 48.2 5.2 34 21-54 6-39 (141)
354 1chu_A Protein (L-aspartate ox 96.1 0.023 8E-07 56.1 9.9 32 192-224 9-40 (540)
355 2weu_A Tryptophan 5-halogenase 96.0 0.019 6.4E-07 56.4 8.8 33 192-224 3-38 (511)
356 2e5v_A L-aspartate oxidase; ar 95.9 0.015 5.2E-07 56.4 7.7 31 193-223 1-31 (472)
357 2wdq_A Succinate dehydrogenase 95.9 0.05 1.7E-06 54.3 11.4 33 192-224 8-40 (588)
358 3ic5_A Putative saccharopine d 95.9 0.0055 1.9E-07 46.7 3.5 35 20-54 4-39 (118)
359 2h88_A Succinate dehydrogenase 95.8 0.052 1.8E-06 54.4 11.2 33 192-224 19-51 (621)
360 1id1_A Putative potassium chan 95.7 0.013 4.6E-07 47.1 5.4 33 21-53 3-35 (153)
361 2gmh_A Electron transfer flavo 95.7 0.016 5.5E-07 57.9 7.0 33 192-224 36-74 (584)
362 1lss_A TRK system potassium up 95.6 0.0099 3.4E-07 46.8 4.1 33 22-54 5-37 (140)
363 1y56_A Hypothetical protein PH 95.5 0.0095 3.2E-07 58.2 4.5 33 191-224 108-140 (493)
364 1kyq_A Met8P, siroheme biosynt 95.5 0.01 3.5E-07 52.7 4.3 36 189-224 11-46 (274)
365 1kf6_A Fumarate reductase flav 95.5 0.066 2.3E-06 53.6 10.4 33 192-224 6-40 (602)
366 4b63_A L-ornithine N5 monooxyg 95.5 0.062 2.1E-06 52.5 10.0 34 21-54 246-281 (501)
367 2hmt_A YUAA protein; RCK, KTN, 95.4 0.016 5.5E-07 45.8 4.9 34 21-54 6-39 (144)
368 3kkj_A Amine oxidase, flavin-c 95.4 0.0062 2.1E-07 53.8 2.6 32 193-224 4-35 (336)
369 2bs2_A Quinol-fumarate reducta 95.1 0.099 3.4E-06 52.8 10.5 33 192-224 6-38 (660)
370 2dkh_A 3-hydroxybenzoate hydro 95.1 0.0082 2.8E-07 60.7 2.5 33 192-224 33-66 (639)
371 3c85_A Putative glutathione-re 94.8 0.03 1E-06 46.5 4.9 34 21-54 39-73 (183)
372 3l4b_C TRKA K+ channel protien 94.5 0.033 1.1E-06 47.8 4.6 32 23-54 2-33 (218)
373 1f0y_A HCDH, L-3-hydroxyacyl-C 94.4 0.03 1E-06 50.7 4.3 34 21-54 15-48 (302)
374 3dfz_A SIRC, precorrin-2 dehyd 94.4 0.044 1.5E-06 47.1 4.9 34 21-54 31-64 (223)
375 2vns_A Metalloreductase steap3 94.4 0.048 1.6E-06 46.7 5.2 35 20-54 27-61 (215)
376 3hn2_A 2-dehydropantoate 2-red 94.3 0.037 1.3E-06 50.4 4.6 34 21-54 2-35 (312)
377 3lk7_A UDP-N-acetylmuramoylala 94.3 0.06 2.1E-06 51.8 6.2 36 189-224 7-42 (451)
378 4dgk_A Phytoene dehydrogenase; 94.2 0.015 5.3E-07 56.7 2.0 33 192-224 2-34 (501)
379 3i83_A 2-dehydropantoate 2-red 94.2 0.035 1.2E-06 50.8 4.2 34 21-54 2-35 (320)
380 3hwr_A 2-dehydropantoate 2-red 94.1 0.061 2.1E-06 49.1 5.6 35 189-224 17-51 (318)
381 3ado_A Lambda-crystallin; L-gu 94.1 0.044 1.5E-06 49.8 4.6 35 20-54 5-39 (319)
382 3oz2_A Digeranylgeranylglycero 94.0 0.025 8.4E-07 53.1 2.9 32 193-224 6-37 (397)
383 4ffl_A PYLC; amino acid, biosy 93.9 0.052 1.8E-06 50.6 4.9 36 21-56 1-36 (363)
384 3i83_A 2-dehydropantoate 2-red 93.9 0.07 2.4E-06 48.8 5.6 33 192-224 3-35 (320)
385 3g17_A Similar to 2-dehydropan 93.9 0.05 1.7E-06 49.1 4.6 34 21-54 2-35 (294)
386 2x5o_A UDP-N-acetylmuramoylala 93.9 0.047 1.6E-06 52.4 4.6 36 21-56 5-40 (439)
387 3hn2_A 2-dehydropantoate 2-red 93.8 0.085 2.9E-06 48.0 6.0 33 192-224 3-35 (312)
388 4g65_A TRK system potassium up 93.8 0.037 1.3E-06 53.3 3.7 32 23-54 5-36 (461)
389 3ihm_A Styrene monooxygenase A 93.7 0.027 9.2E-07 53.9 2.6 35 190-224 21-55 (430)
390 2dpo_A L-gulonate 3-dehydrogen 93.7 0.058 2E-06 49.2 4.6 35 20-54 5-39 (319)
391 3doj_A AT3G25530, dehydrogenas 93.6 0.051 1.8E-06 49.4 4.2 36 19-54 19-54 (310)
392 1pjq_A CYSG, siroheme synthase 93.6 0.06 2E-06 51.9 4.8 36 189-224 10-45 (457)
393 2g1u_A Hypothetical protein TM 93.5 0.049 1.7E-06 43.8 3.5 36 189-224 17-52 (155)
394 2ew2_A 2-dehydropantoate 2-red 93.5 0.053 1.8E-06 49.2 4.0 34 21-54 3-36 (316)
395 3lk7_A UDP-N-acetylmuramoylala 93.5 0.051 1.7E-06 52.3 4.0 34 21-54 9-42 (451)
396 1kyq_A Met8P, siroheme biosynt 93.4 0.039 1.3E-06 49.0 2.8 34 21-54 13-46 (274)
397 3eag_A UDP-N-acetylmuramate:L- 93.4 0.1 3.5E-06 47.8 5.8 34 191-224 4-38 (326)
398 4e12_A Diketoreductase; oxidor 93.3 0.066 2.2E-06 48.0 4.3 34 21-54 4-37 (283)
399 3k6j_A Protein F01G10.3, confi 93.3 0.077 2.6E-06 50.8 4.8 36 19-54 52-87 (460)
400 3vtf_A UDP-glucose 6-dehydroge 93.2 0.06 2E-06 51.3 4.0 36 19-54 19-54 (444)
401 4dio_A NAD(P) transhydrogenase 93.2 0.065 2.2E-06 50.3 4.1 34 21-54 190-223 (405)
402 3ius_A Uncharacterized conserv 93.1 0.061 2.1E-06 48.0 3.7 35 20-54 4-38 (286)
403 2pv7_A T-protein [includes: ch 93.0 0.1 3.4E-06 47.2 5.0 35 20-54 20-55 (298)
404 3gg2_A Sugar dehydrogenase, UD 93.0 0.07 2.4E-06 51.2 4.2 33 22-54 3-35 (450)
405 1jw9_B Molybdopterin biosynthe 93.0 0.069 2.4E-06 46.9 3.8 34 21-54 31-65 (249)
406 2a9f_A Putative malic enzyme ( 92.9 0.067 2.3E-06 49.7 3.7 34 21-54 188-222 (398)
407 3qha_A Putative oxidoreductase 92.9 0.081 2.8E-06 47.8 4.2 35 21-55 15-49 (296)
408 3l9w_A Glutathione-regulated p 92.8 0.11 3.8E-06 49.2 5.2 34 21-54 4-37 (413)
409 2oln_A NIKD protein; flavoprot 92.8 0.06 2E-06 50.7 3.3 33 192-224 5-37 (397)
410 3g5s_A Methylenetetrahydrofola 92.7 0.053 1.8E-06 50.7 2.7 33 192-224 2-34 (443)
411 3p2y_A Alanine dehydrogenase/p 92.6 0.079 2.7E-06 49.3 3.8 34 21-54 184-217 (381)
412 1id1_A Putative potassium chan 92.6 0.082 2.8E-06 42.4 3.5 34 191-224 3-36 (153)
413 3k96_A Glycerol-3-phosphate de 92.6 0.12 4E-06 48.0 5.0 34 21-54 29-62 (356)
414 3ggo_A Prephenate dehydrogenas 92.6 0.098 3.3E-06 47.6 4.4 35 20-54 32-68 (314)
415 3ghy_A Ketopantoate reductase 92.6 0.13 4.3E-06 47.4 5.1 32 22-53 4-35 (335)
416 2raf_A Putative dinucleotide-b 92.5 0.1 3.5E-06 44.4 4.2 35 21-55 19-53 (209)
417 1lld_A L-lactate dehydrogenase 92.5 0.093 3.2E-06 47.9 4.2 34 21-54 7-42 (319)
418 2hjr_A Malate dehydrogenase; m 92.4 0.11 3.6E-06 47.7 4.4 35 20-54 13-48 (328)
419 3pdu_A 3-hydroxyisobutyrate de 92.3 0.11 3.7E-06 46.6 4.3 33 22-54 2-34 (287)
420 1vl6_A Malate oxidoreductase; 92.3 0.1 3.4E-06 48.4 4.0 34 20-53 191-225 (388)
421 4huj_A Uncharacterized protein 92.2 0.093 3.2E-06 45.0 3.5 34 21-54 23-57 (220)
422 2uzz_A N-methyl-L-tryptophan o 92.2 0.053 1.8E-06 50.5 2.1 33 192-224 3-35 (372)
423 2gf3_A MSOX, monomeric sarcosi 92.2 0.068 2.3E-06 50.0 2.9 33 192-224 4-36 (389)
424 3oj0_A Glutr, glutamyl-tRNA re 92.2 0.048 1.6E-06 43.3 1.5 34 21-54 21-54 (144)
425 3eag_A UDP-N-acetylmuramate:L- 92.1 0.11 3.8E-06 47.5 4.2 34 21-54 4-38 (326)
426 1ur5_A Malate dehydrogenase; o 92.1 0.12 4E-06 47.0 4.3 34 21-54 2-36 (309)
427 3ka7_A Oxidoreductase; structu 92.1 0.067 2.3E-06 50.8 2.7 32 193-224 2-33 (425)
428 3ego_A Probable 2-dehydropanto 92.0 0.11 3.7E-06 47.2 3.9 33 21-54 2-34 (307)
429 1ks9_A KPA reductase;, 2-dehyd 92.0 0.12 4.1E-06 46.2 4.2 32 23-54 2-33 (291)
430 3fwz_A Inner membrane protein 92.0 0.11 3.7E-06 41.0 3.4 35 190-224 6-40 (140)
431 3rui_A Ubiquitin-like modifier 92.0 0.12 4.1E-06 47.2 4.1 35 20-54 33-68 (340)
432 3ego_A Probable 2-dehydropanto 92.0 0.14 4.6E-06 46.5 4.5 32 192-224 3-34 (307)
433 1c0p_A D-amino acid oxidase; a 91.9 0.084 2.9E-06 49.0 3.2 34 191-224 6-39 (363)
434 1pzg_A LDH, lactate dehydrogen 91.9 0.12 4.1E-06 47.4 4.1 33 22-54 10-43 (331)
435 3c96_A Flavin-containing monoo 91.8 0.092 3.1E-06 49.7 3.4 33 192-224 5-38 (410)
436 1z82_A Glycerol-3-phosphate de 91.8 0.13 4.4E-06 47.3 4.2 35 20-54 13-47 (335)
437 3c4a_A Probable tryptophan hyd 91.7 0.074 2.5E-06 49.8 2.6 33 192-224 1-35 (381)
438 1yj8_A Glycerol-3-phosphate de 91.7 0.12 4E-06 48.4 3.9 36 20-55 20-62 (375)
439 1zej_A HBD-9, 3-hydroxyacyl-CO 91.7 0.13 4.4E-06 46.3 3.9 34 20-54 11-44 (293)
440 4id9_A Short-chain dehydrogena 91.7 0.18 6.3E-06 46.3 5.2 37 19-55 17-54 (347)
441 4ezb_A Uncharacterized conserv 91.7 0.11 3.6E-06 47.5 3.5 35 20-54 23-58 (317)
442 2iid_A L-amino-acid oxidase; f 91.6 0.079 2.7E-06 51.6 2.7 35 190-224 32-66 (498)
443 3h8v_A Ubiquitin-like modifier 91.6 0.13 4.4E-06 46.1 3.9 34 21-54 36-70 (292)
444 2ewd_A Lactate dehydrogenase,; 91.6 0.14 4.7E-06 46.7 4.1 34 21-54 4-38 (317)
445 3ghy_A Ketopantoate reductase 91.5 0.15 5.2E-06 46.8 4.4 33 192-224 4-36 (335)
446 3dtt_A NADP oxidoreductase; st 91.5 0.16 5.4E-06 44.4 4.2 35 20-54 18-52 (245)
447 4gde_A UDP-galactopyranose mut 91.4 0.095 3.2E-06 51.1 3.0 33 192-224 11-44 (513)
448 3phh_A Shikimate dehydrogenase 91.4 0.16 5.6E-06 44.9 4.2 34 21-54 118-151 (269)
449 3gpi_A NAD-dependent epimerase 91.4 0.24 8.1E-06 44.1 5.5 34 21-54 3-36 (286)
450 3l6d_A Putative oxidoreductase 91.4 0.23 7.9E-06 44.9 5.4 35 20-54 8-42 (306)
451 3g0o_A 3-hydroxyisobutyrate de 91.3 0.15 5.3E-06 46.0 4.2 35 20-54 6-40 (303)
452 3c24_A Putative oxidoreductase 91.3 0.16 5.5E-06 45.4 4.2 35 20-54 10-45 (286)
453 3gt0_A Pyrroline-5-carboxylate 91.3 0.21 7.1E-06 43.6 4.9 34 21-54 2-39 (247)
454 1zud_1 Adenylyltransferase THI 91.3 0.14 4.8E-06 44.9 3.7 34 21-54 28-62 (251)
455 1x13_A NAD(P) transhydrogenase 91.3 0.15 5E-06 48.2 4.0 34 21-54 172-205 (401)
456 3g79_A NDP-N-acetyl-D-galactos 91.3 0.14 4.9E-06 49.3 4.0 35 21-55 18-54 (478)
457 2y0c_A BCEC, UDP-glucose dehyd 91.3 0.15 5.1E-06 49.4 4.2 34 21-54 8-41 (478)
458 2uyy_A N-PAC protein; long-cha 91.2 0.23 7.8E-06 45.1 5.2 33 22-54 31-63 (316)
459 1l7d_A Nicotinamide nucleotide 91.2 0.16 5.3E-06 47.7 4.1 35 20-54 171-205 (384)
460 3q2o_A Phosphoribosylaminoimid 91.1 0.18 6.2E-06 47.4 4.6 36 20-55 13-48 (389)
461 3dje_A Fructosyl amine: oxygen 91.1 0.11 3.6E-06 49.7 3.0 34 191-224 6-40 (438)
462 3llv_A Exopolyphosphatase-rela 91.1 0.11 3.8E-06 40.8 2.6 34 191-224 6-39 (141)
463 3nks_A Protoporphyrinogen oxid 91.0 0.1 3.4E-06 50.5 2.8 33 192-224 3-37 (477)
464 1pjc_A Protein (L-alanine dehy 91.0 0.17 5.7E-06 47.1 4.1 34 21-54 167-200 (361)
465 1bg6_A N-(1-D-carboxylethyl)-L 91.0 0.17 5.7E-06 46.9 4.2 33 22-54 5-37 (359)
466 2v6b_A L-LDH, L-lactate dehydr 91.0 0.17 5.8E-06 45.8 4.1 32 23-54 2-35 (304)
467 4dll_A 2-hydroxy-3-oxopropiona 91.0 0.16 5.3E-06 46.4 3.9 35 20-54 30-64 (320)
468 4gbj_A 6-phosphogluconate dehy 90.9 0.12 4.1E-06 46.6 3.0 37 19-55 3-39 (297)
469 3nyc_A D-arginine dehydrogenas 90.9 0.099 3.4E-06 48.7 2.5 34 190-224 8-41 (381)
470 1lss_A TRK system potassium up 90.8 0.13 4.4E-06 40.1 2.7 33 192-224 5-37 (140)
471 2h78_A Hibadh, 3-hydroxyisobut 90.8 0.16 5.5E-06 45.8 3.7 34 21-54 3-36 (302)
472 3g3e_A D-amino-acid oxidase; F 90.8 0.1 3.5E-06 48.1 2.5 32 193-224 2-39 (351)
473 2b9w_A Putative aminooxidase; 90.7 0.12 4.2E-06 49.0 3.0 34 191-224 6-40 (424)
474 2e1m_A L-glutamate oxidase; L- 90.7 0.13 4.4E-06 48.1 3.0 34 190-223 43-76 (376)
475 3r6d_A NAD-dependent epimerase 90.6 0.24 8.1E-06 42.2 4.5 35 20-54 4-40 (221)
476 3ic5_A Putative saccharopine d 90.6 0.11 3.9E-06 39.1 2.2 34 191-224 5-39 (118)
477 3pef_A 6-phosphogluconate dehy 90.6 0.19 6.4E-06 45.0 4.0 33 22-54 2-34 (287)
478 3qsg_A NAD-binding phosphogluc 90.6 0.17 6E-06 45.9 3.8 33 21-53 24-57 (312)
479 2jae_A L-amino acid oxidase; o 90.5 0.16 5.5E-06 49.2 3.7 35 190-224 10-44 (489)
480 3ktd_A Prephenate dehydrogenas 90.5 0.31 1.1E-05 44.8 5.3 35 20-54 7-41 (341)
481 1t2d_A LDH-P, L-lactate dehydr 90.4 0.22 7.5E-06 45.5 4.3 34 21-54 4-38 (322)
482 4a7p_A UDP-glucose dehydrogena 90.4 0.19 6.6E-06 48.0 4.0 35 21-55 8-42 (446)
483 1nyt_A Shikimate 5-dehydrogena 90.3 0.22 7.4E-06 44.3 4.1 34 21-54 119-152 (271)
484 3don_A Shikimate dehydrogenase 90.3 0.25 8.6E-06 43.9 4.4 34 21-54 117-151 (277)
485 2aef_A Calcium-gated potassium 90.3 0.1 3.5E-06 45.1 1.9 34 20-54 8-41 (234)
486 3gvi_A Malate dehydrogenase; N 90.2 0.24 8.2E-06 45.1 4.4 34 21-54 7-41 (324)
487 1y6j_A L-lactate dehydrogenase 90.2 0.27 9.3E-06 44.7 4.7 34 21-54 7-42 (318)
488 2p4q_A 6-phosphogluconate dehy 90.2 0.31 1.1E-05 47.3 5.3 35 20-54 9-43 (497)
489 2i6t_A Ubiquitin-conjugating e 90.1 0.21 7.3E-06 45.1 3.9 34 21-54 14-49 (303)
490 1zcj_A Peroxisomal bifunctiona 90.1 0.2 6.7E-06 48.4 3.9 34 21-54 37-70 (463)
491 3orq_A N5-carboxyaminoimidazol 90.1 0.25 8.7E-06 46.1 4.6 36 20-55 11-46 (377)
492 3c4n_A Uncharacterized protein 90.1 0.13 4.5E-06 48.6 2.6 33 192-224 37-71 (405)
493 2cvz_A Dehydrogenase, 3-hydrox 90.1 0.25 8.5E-06 44.1 4.4 32 22-54 2-33 (289)
494 3pid_A UDP-glucose 6-dehydroge 90.1 0.2 6.8E-06 47.6 3.8 33 21-54 36-68 (432)
495 1hyh_A L-hicdh, L-2-hydroxyiso 90.1 0.21 7.2E-06 45.3 3.8 33 22-54 2-36 (309)
496 2hmt_A YUAA protein; RCK, KTN, 90.1 0.16 5.5E-06 39.8 2.7 35 190-224 5-39 (144)
497 1vpd_A Tartronate semialdehyde 90.0 0.2 6.7E-06 45.1 3.6 33 22-54 6-38 (299)
498 3mog_A Probable 3-hydroxybutyr 90.0 0.31 1.1E-05 47.1 5.2 34 21-54 5-38 (483)
499 3h5n_A MCCB protein; ubiquitin 90.0 0.22 7.5E-06 46.1 4.0 34 21-54 118-152 (353)
500 3u62_A Shikimate dehydrogenase 90.0 0.34 1.2E-05 42.4 5.0 32 23-54 110-142 (253)
No 1
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=2.5e-41 Score=321.59 Aligned_cols=343 Identities=21% Similarity=0.340 Sum_probs=268.9
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
++||+|||||++|+++|..|+++|++|+|+|+.+.+||.|.. .|+...+..+...+.++.++.+.....++.+..+.+|
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQH-AWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAY 81 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGG-SCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccC-CCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHH
Confidence 479999999999999999999999999999999999999985 5777777777777788887777777788899999999
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEE-EEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCCCCCCceeee
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWR-VKTASSAGSTKTEFEYICRWLVVATGENAERVMPDIEGLADFGGEVIH 179 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~-v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~~~~~~~~~~ 179 (423)
+.+.+++++++++++++|++++..+ +.|. |++.+ + ++.||+||+|||.++.|..|.+||...+.+..++
T Consensus 82 l~~~~~~~~~~~~~~~~v~~i~~~~--~~~~~v~~~~------g--~~~~d~vV~AtG~~~~~~~~~~~g~~~~~~~~~~ 151 (357)
T 4a9w_A 82 LAQYEQKYALPVLRPIRVQRVSHFG--ERLRVVARDG------R--QWLARAVISATGTWGEAYTPEYQGLESFAGIQLH 151 (357)
T ss_dssp HHHHHHHTTCCEECSCCEEEEEEET--TEEEEEETTS------C--EEEEEEEEECCCSGGGBCCCCCTTGGGCCSEEEE
T ss_pred HHHHHHHcCCEEEcCCEEEEEEECC--CcEEEEEeCC------C--EEEeCEEEECCCCCCCCCCCCCCCccccCCcEEE
Confidence 9999999999999999999999877 7887 77654 4 8999999999998778888999998888888888
Q ss_pred cCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHhhccHHHHHHHHHH
Q 014522 180 ACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPLWLVDKILLI 259 (423)
Q Consensus 180 ~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (423)
...+.......+++++|||+|.+|+|+|..|++.+ +|+++.|++.+++|....+ ..+ ..++...+....
T Consensus 152 ~~~~~~~~~~~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~~~~~~~~~~~---~~~----~~~~~~~~~~~~--- 220 (357)
T 4a9w_A 152 SAHYSTPAPFAGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHEPAFLADDVDG---RVL----FERATERWKAQQ--- 220 (357)
T ss_dssp GGGCCCSGGGTTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSCCCBCCTTCCT---HHH----HTC------------
T ss_pred eccCCChhhcCCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCCCeecchhhcC---ccH----HHHHHHHHhccc---
Confidence 88887777778899999999999999999999998 6999999964666654320 011 111111100000
Q ss_pred HHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecCceEEeCCeEEEccCcEecccEEEEcCCC
Q 014522 260 LAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPGIKRISCGQAELINGEKLDIDAIVLATGY 339 (423)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~v~~~~g~~~~~D~vi~a~G~ 339 (423)
....... .......+.....+.+.++.+.+.....+.+++.+++.+.+|+++++|.||+|+|+
T Consensus 221 -----~~~~~~~------------~~~~~~~~~~~~~~~~~~~~g~i~~~~~v~~~~~~~v~~~~g~~i~~D~vi~a~G~ 283 (357)
T 4a9w_A 221 -----EGREPDL------------PPGGFGDIVMVPPVLDARARGVLAAVPPPARFSPTGMQWADGTERAFDAVIWCTGF 283 (357)
T ss_dssp ------------------------------CBCCCHHHHHHHHTTCCCEECCCSEEETTEEECTTSCEEECSEEEECCCB
T ss_pred -----cccCCCc------------ccccccCcccChhHHHHHhcCceEEecCcceEeCCeeEECCCCEecCCEEEECCCc
Confidence 0000000 00001123344455666666666666668899999999999999999999999999
Q ss_pred CCCCCCcccccccccCCCCCCCCCC-CCCCCCCceEEEe--ecccc----CCCcchhHHHHHHHHhhhhHH
Q 014522 340 RSNVPSWLQESEFFSENGFPKAPFP-HGWKGNAGLYAVG--FTRRG----LSGASSDAMRIAQDIGKVWKE 403 (423)
Q Consensus 340 ~~~~~~ll~~~~~~~~~g~~~~~~~-~~~~~~~~vya~G--d~~~~----~~~a~~~g~~~a~~i~~~l~~ 403 (423)
+|++ .+++.+++.+++|++.+|.. .++|+.|+|||+| |++.. ...|..||+.+|.+|...+++
T Consensus 284 ~p~~-~~l~~~gl~~~~G~i~vd~~~l~~t~~~~vya~Gd~d~~~~~~~~~~~A~~~g~~~a~~i~~~l~g 353 (357)
T 4a9w_A 284 RPAL-SHLKGLDLVTPQGQVEVDGSGLRALAVPSVWLLGYGDWNGMASATLIGVTRYAREAVRQVTAYCAD 353 (357)
T ss_dssp CCCC-GGGTTTTCBCTTSCBCBCTTSCBBSSCTTEEECSSCGGGSTTCSSTTTHHHHHHHHHHHHHHHTC-
T ss_pred CCCC-cccCcccccCCCCCccccCCcccCCCCCCeEEeccccccccchhhhhhhHHHHHHHHHHHHHHHHh
Confidence 9998 78888888878899999953 3789999999999 66642 337999999999999999987
No 2
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=100.00 E-value=2.4e-40 Score=324.93 Aligned_cols=308 Identities=23% Similarity=0.407 Sum_probs=243.3
Q ss_pred cCCeEEECCChHHHHHHHHHHH---cCCC---EEEEecCCCCCccccccc---------------CCceeecCCCccccC
Q 014522 21 VNGPVIVGAGPSGLATAACLRD---QGVP---FVMLERAECIASLWQKRT---------------YDRLNLHLPKQFCQL 79 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~---~g~~---v~lie~~~~~gg~~~~~~---------------~~~~~~~~~~~~~~~ 79 (423)
.+||+|||||++|+++|..|++ .|.+ |+|||+.+.+||.|.... |+.+..+.+...+.+
T Consensus 2 ~~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~ 81 (464)
T 2xve_A 2 ATRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEF 81 (464)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCB
T ss_pred CCcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhccc
Confidence 4689999999999999999999 9999 999999999999997632 333334444444445
Q ss_pred CCCCCCC----CCCCCCCHHHHHHHHHHHHHHcCCc--eeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEE
Q 014522 80 PKLQFPE----DFPEYPTKRQFIQYLESYAEKFEIN--PRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLV 153 (423)
Q Consensus 80 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vv 153 (423)
+.++++. +.+.++....+.+|+.++++++++. ++++++|+.++.....+.|.|++.+..+ +...++.||+||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~--g~~~~~~~d~VV 159 (464)
T 2xve_A 82 ADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTT--DTIYSEEFDYVV 159 (464)
T ss_dssp TTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTT--TEEEEEEESEEE
T ss_pred CCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCC--CceEEEEcCEEE
Confidence 5444332 1256788999999999999999998 8899999999988744589898865211 123679999999
Q ss_pred EccCCCCCCcCCCCCCCCCCCceeeecCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeeccccc
Q 014522 154 VATGENAERVMPDIEGLADFGGEVIHACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREIL 233 (423)
Q Consensus 154 iAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~ 233 (423)
+|||.++.|..|.+||++.+.+.++|+.++.....+.+++|+|||+|.+|+|+|..|++.|.+|+++.|++. +++...
T Consensus 160 vAtG~~s~p~~p~ipG~~~~~g~~~hs~~~~~~~~~~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~-~~~~~~- 237 (464)
T 2xve_A 160 CCTGHFSTPYVPEFEGFEKFGGRILHAHDFRDALEFKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTA-PMGYKW- 237 (464)
T ss_dssp ECCCSSSSBCCCCCBTTTTCCSEEEEGGGCCCGGGGTTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSC-CCCCCC-
T ss_pred ECCCCCCCCccCCCCCcccCCceEEehhhhCCHhHcCCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCC-CCCCCC-
Confidence 999998899999999998888888898888776667899999999999999999999999999999999872 211000
Q ss_pred CCChHHHHHHHHhhccHHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecCce
Q 014522 234 GKSTFELATLMMKWLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPGIK 313 (423)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~ 313 (423)
..+|++++.|.
T Consensus 238 ---------------------------------------------------------------------~~~V~~~~~V~ 248 (464)
T 2xve_A 238 ---------------------------------------------------------------------PENWDERPNLV 248 (464)
T ss_dssp ---------------------------------------------------------------------CTTEEECSCEE
T ss_pred ---------------------------------------------------------------------CCceEEcCCeE
Confidence 13677776688
Q ss_pred EEeCCeEEEccCcEecccEEEEcCCCCCCCCCcccc-cccc-cCCCCCCCCC-CCCCCCCCceEEEeeccccCC--Ccch
Q 014522 314 RISCGQAELINGEKLDIDAIVLATGYRSNVPSWLQE-SEFF-SENGFPKAPF-PHGWKGNAGLYAVGFTRRGLS--GASS 388 (423)
Q Consensus 314 ~~~~~~v~~~~g~~~~~D~vi~a~G~~~~~~~ll~~-~~~~-~~~g~~~~~~-~~~~~~~~~vya~Gd~~~~~~--~a~~ 388 (423)
+++.++|+++||+++++|.||+|||++|+. +++.. +++. ++.|.+...+ +.+.++.|+||++||+..... .|..
T Consensus 249 ~i~~~~V~~~dG~~i~~D~Vi~atG~~p~~-~~l~~~~gl~~~~~~~v~~~~~~~~~t~~p~i~aiGd~~~~~~~~~a~~ 327 (464)
T 2xve_A 249 RVDTENAYFADGSSEKVDAIILCTGYIHHF-PFLNDDLRLVTNNRLWPLNLYKGVVWEDNPKFFYIGMQDQWYSFNMFDA 327 (464)
T ss_dssp EECSSEEEETTSCEEECSEEEECCCBCCCC-TTBCTTTCCCCCSSSCCSSEETTTEESSSTTEEECSCSCCSSCHHHHHH
T ss_pred EEeCCEEEECCCCEEeCCEEEECCCCCCCC-CCcCcccccccCCCcccccccceEecCCCCCEEEEeCcccccchHHHHH
Confidence 998889999999999999999999999998 55554 5664 3344553221 234688999999999986533 6889
Q ss_pred hHHHHHHHHhhhhH
Q 014522 389 DAMRIAQDIGKVWK 402 (423)
Q Consensus 389 ~g~~~a~~i~~~l~ 402 (423)
||+++|.+|.+.+.
T Consensus 328 qa~~~a~~l~G~~~ 341 (464)
T 2xve_A 328 QAWYARDVIMGRLP 341 (464)
T ss_dssp HHHHHHHHHTTSSC
T ss_pred HHHHHHHHHcCCCC
Confidence 99999999988654
No 3
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=100.00 E-value=6.4e-41 Score=333.68 Aligned_cols=364 Identities=20% Similarity=0.291 Sum_probs=273.6
Q ss_pred ccCCeEEECCChHHHHHHHHHH-HcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCC----CCCCCCCCCCH
Q 014522 20 WVNGPVIVGAGPSGLATAACLR-DQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQ----FPEDFPEYPTK 94 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~-~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 94 (423)
+.+||+|||||++|+++|..|+ +.|++|+|+|+.+.+||+|..+.|+++.++.+...+.+.+.+ .+.+...++..
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~ 86 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQ 86 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCH
Confidence 4679999999999999999999 889999999999999999999999999998888777766431 11233456789
Q ss_pred HHHHHHHHHHHHHcCC--ceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCCCC
Q 014522 95 RQFIQYLESYAEKFEI--NPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDIEGLAD 172 (423)
Q Consensus 95 ~~~~~~~~~~~~~~~~--~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~~~ 172 (423)
.++.+|+.+.++++++ .++++++|++++.++..+.|.|++.+ + .++.||+||+|||.++.|..|.+||++.
T Consensus 87 ~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~------G-~~i~ad~lV~AtG~~s~p~~p~ipG~~~ 159 (540)
T 3gwf_A 87 PEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDH------G-EVYRAKYVVNAVGLLSAINFPNLPGLDT 159 (540)
T ss_dssp HHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETT------S-CEEEEEEEEECCCSCCSBCCCCCTTGGG
T ss_pred HHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcC------C-CEEEeCEEEECCcccccCCCCCCCCccc
Confidence 9999999999999998 68999999999998866789999876 5 5799999999999888999999999998
Q ss_pred CCceeeecCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHhhccHHH
Q 014522 173 FGGEVIHACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPLWL 252 (423)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (423)
+.+..+|+..+.......+++|+|||+|.+|+|+|..|++.+.+|+++.|++.+++|..+......... .+...+|...
T Consensus 160 f~g~~~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~-~l~~~~~~~~ 238 (540)
T 3gwf_A 160 FEGETIHTAAWPEGKSLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPVGNRPVNPEQIA-EIKADYDRIW 238 (540)
T ss_dssp CCSEEEEGGGCCSSCCCTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCCEEECCCCBCCHHHHH-HHHHTHHHHH
T ss_pred cCCCEEEeecCCCccccccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCccCCCCHHHHH-HHHhccHHHH
Confidence 989899998887777788999999999999999999999999999999999988888776544332111 1110111100
Q ss_pred ---------------------------------------------------------H---HHHHHHHHHHHhccccccC
Q 014522 253 ---------------------------------------------------------V---DKILLILAWFILGNTESYG 272 (423)
Q Consensus 253 ---------------------------------------------------------~---~~~~~~~~~~~~~~~~~~~ 272 (423)
. ..+....-+....+....
T Consensus 239 ~~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dp~~~- 317 (540)
T 3gwf_A 239 ERAKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDIATDEAANEAAASFIRAKVAEIIEDPETA- 317 (540)
T ss_dssp HHHHTSSSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHHHTSCSCTTTCHHHHHHHHHHHHHHHHHHCCSHHHH-
T ss_pred HHHHhccccccccccchhhhhCCHHHHHHHHHHHHhcccchhhhhhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHH-
Confidence 0 000000001111111111
Q ss_pred CCCCCCCcccccccCCCccccChhhhhhhhcCCeEEe---cC-ceEEeCCeEEEccCcEecccEEEEcCCCCCCCCCccc
Q 014522 273 LKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVV---PG-IKRISCGQAELINGEKLDIDAIVLATGYRSNVPSWLQ 348 (423)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~---~~-i~~~~~~~v~~~~g~~~~~D~vi~a~G~~~~~~~ll~ 348 (423)
..+.|. ...++++.++..+++.+.+.+|+++ .. |+++++++|+++||+++++|+||+|||+.++. .++.
T Consensus 318 ---~~l~P~---~~g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~~gv~~~dG~~~~~DvIV~ATGf~~~~-~~~~ 390 (540)
T 3gwf_A 318 ---RKLMPK---GLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTAKGVVTEDGVLHELDVLVFATGFDAVD-GNYR 390 (540)
T ss_dssp ---HHHCCC---SCCCSSCEEESSTGGGGGSTTEEEEETTTSCEEEECSSEEEETTCCEEECSEEEECCCBSCSS-HHHH
T ss_pred ---HhCCCC---CCCccccCCCccHHHHhcCCCEEEEeCCCCCccEEecCeEEcCCCCEEECCEEEECCccCccc-cCcC
Confidence 112222 4668899999999999999999999 44 99999999999999999999999999999985 3444
Q ss_pred ccccccCCCCCC---------CCCCCCCCCCCceEEE-eecccc---CCCcchhHHHHHHHHhh
Q 014522 349 ESEFFSENGFPK---------APFPHGWKGNAGLYAV-GFTRRG---LSGASSDAMRIAQDIGK 399 (423)
Q Consensus 349 ~~~~~~~~g~~~---------~~~~~~~~~~~~vya~-Gd~~~~---~~~a~~~g~~~a~~i~~ 399 (423)
.+++...+|... .-......+.||+|++ |+.... +..+..|+.++++.|..
T Consensus 391 ~~~i~g~~G~~l~~~w~~~~~~y~g~~v~gfPN~f~~~Gp~~~~~s~~~~~e~q~~~i~~~i~~ 454 (540)
T 3gwf_A 391 RIEIRGRDGLHINDHWDGQPTSYLGVSTANFPNWFMVLGPNGPFTNLPPSIETQVEWISDTIGY 454 (540)
T ss_dssp TSEEECGGGCBHHHHTSSSCCCBTTTBCTTCTTEEESSCSSCBCSCHHHHHHHHHHHHHHHHHH
T ss_pred cceEECCCCcCHHHhhccChhhccccccCCCCceEEEecCCCCCccHHHHHHHHHHHHHHHHHH
Confidence 444433333222 1111234588999998 775541 22456677777766643
No 4
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=100.00 E-value=4.9e-40 Score=327.66 Aligned_cols=368 Identities=20% Similarity=0.294 Sum_probs=266.6
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCC----CCCCCCCCCHH
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQF----PEDFPEYPTKR 95 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 95 (423)
+.+||+|||||++|+++|..|++.|++|+|||+.+.+||+|..+.|++..++.+...+.+.+.+. ..+...++...
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~ 87 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQP 87 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHH
Confidence 46799999999999999999999999999999999999999999999999998877766653332 23334567899
Q ss_pred HHHHHHHHHHHHcCC--ceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCCCCC
Q 014522 96 QFIQYLESYAEKFEI--NPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDIEGLADF 173 (423)
Q Consensus 96 ~~~~~~~~~~~~~~~--~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~~~~ 173 (423)
++.+|+.+.++++++ .++++++|++++.++..+.|.|++.+ + .+++||+||+|||.++.|..|.+||++.+
T Consensus 88 ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~------G-~~~~ad~lV~AtG~~s~p~~p~ipG~~~f 160 (545)
T 3uox_A 88 EMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDN------E-EVVTCRFLISATGPLSASRMPDIKGIDSF 160 (545)
T ss_dssp HHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETT------T-EEEEEEEEEECCCSCBC---CCCTTGGGC
T ss_pred HHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECC------C-CEEEeCEEEECcCCCCCCcCCCCCCcccc
Confidence 999999999999998 67899999999998766789999876 5 68999999999998889999999999998
Q ss_pred CceeeecCCCCCC-------CCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHh
Q 014522 174 GGEVIHACDYKSG-------EKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMK 246 (423)
Q Consensus 174 ~~~~~~~~~~~~~-------~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~ 246 (423)
.+..+|+..+... ....+++|+|||+|.+|+|+|..|++.+.+|+++.|++.+++|..+......... .+..
T Consensus 161 ~g~~~h~~~~~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~-~l~~ 239 (545)
T 3uox_A 161 KGESFHSSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNWCTPLGNSPMSKEKMD-SLRN 239 (545)
T ss_dssp CSEEEEGGGCCBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCCCEECCCCBCCHHHHH-HHHH
T ss_pred CCCeEEcccccccccccccccccCCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCccccCCcCCCCHHHHH-HHHh
Confidence 8888998887665 6667899999999999999999999999999999999988888776544332211 1111
Q ss_pred hccHHH--------------------------HHHHHH--------------------------HHHHHHhccccccCCC
Q 014522 247 WLPLWL--------------------------VDKILL--------------------------ILAWFILGNTESYGLK 274 (423)
Q Consensus 247 ~~~~~~--------------------------~~~~~~--------------------------~~~~~~~~~~~~~~~~ 274 (423)
.+|... ...+.. ......... .+..+.
T Consensus 240 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~ 318 (545)
T 3uox_A 240 RYPTILEYVKSTDTAFPYHRDPRKGTDVSESERDAFFEELYRQPGYGIWLSGFRDLLLNKESNKFLADFVAKK-IRQRVK 318 (545)
T ss_dssp THHHHHHHHTTSSSSSSCCCBSSCGGGSCHHHHHHHHHHHHHSSSTHHHHTSBTTTTTCHHHHHHHHHHHHHH-HHHHCS
T ss_pred hhHHHHHHHhhcccccccccccchhhhCCHHHHHHHHHHHHhhhhHHHHHhhhhhhhcCHHHHHHHHHHHHHH-HHHHcC
Confidence 111100 000000 000000000 000111
Q ss_pred CCC----CCcccccccCCCccccChhhhhhhhcCCeEEe---cC-ceEEeCCeEEEccCcEecccEEEEcCCCCCCCCCc
Q 014522 275 RPS----MGPLALKNTMGKTPVLDIGALKKIRSGHINVV---PG-IKRISCGQAELINGEKLDIDAIVLATGYRSNVPSW 346 (423)
Q Consensus 275 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~---~~-i~~~~~~~v~~~~g~~~~~D~vi~a~G~~~~~~~l 346 (423)
++. +.|. .....++++.++..+++.+++.+|+++ .. |+++++++|+++|| ++++|+||+|||+.+++ .+
T Consensus 319 d~~~~~~l~P~-~~~~g~kR~~~~~~y~~al~~~nV~lv~~~~~~I~~it~~gv~~~dG-~~~~D~IV~ATGf~~~~-~~ 395 (545)
T 3uox_A 319 DPVVAEKLIPK-DHPFGAKRVPMETNYYETYNRDNVHLVDIREAPIQEVTPEGIKTADA-AYDLDVIIYATGFDAVT-GS 395 (545)
T ss_dssp CHHHHHHTSCS-SSCTTSSCCCEESSHHHHTTSTTEEEEETTTSCEEEEETTEEEESSC-EEECSEEEECCCCBSSS-CS
T ss_pred CHHHHHhCCCC-CCCCCCCccCCCccHHHHhcCCCEEEEecCCCCceEEccCeEEeCCC-eeecCEEEECCcccccc-cc
Confidence 111 1110 112457788889999999999999998 34 99999999999999 99999999999999875 44
Q ss_pred ccccccccCCCCCCC-----CC----CCCCCCCCceEEEeecccc------CCCcchhHHHHHHHHhh
Q 014522 347 LQESEFFSENGFPKA-----PF----PHGWKGNAGLYAVGFTRRG------LSGASSDAMRIAQDIGK 399 (423)
Q Consensus 347 l~~~~~~~~~g~~~~-----~~----~~~~~~~~~vya~Gd~~~~------~~~a~~~g~~~a~~i~~ 399 (423)
+..+.+...+|.... .. .....+.||+|.+.-...+ +..+..|+.++++.|..
T Consensus 396 ~~~~~i~g~~G~~l~~~w~~~~~~y~g~~~~gfPN~f~~~gp~~~~~~~s~~~~~e~~~~~i~~~i~~ 463 (545)
T 3uox_A 396 LDRIDIRGKDNVRLIDAWAEGPSTYLGLQARGFPNFFTLVGPHNGSTFCNVGVCGGLQAEWVLRMISY 463 (545)
T ss_dssp CTTSEEECGGGCBHHHHTTTSCCCBTTTBCTTCTTEEECSSGGGTGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCceEECCCCccHHHhhccccceeeccccCCCCcEEEEeCCCCCCccccHHHHHHHHHHHHHHHHHH
Confidence 444444333443221 10 1233578999997543322 11456777777776644
No 5
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=100.00 E-value=5.7e-39 Score=320.26 Aligned_cols=368 Identities=22% Similarity=0.279 Sum_probs=268.3
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCC----CCCCCCCCCCHH
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQ----FPEDFPEYPTKR 95 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 95 (423)
+.+||+|||||++|+++|..|++.|++|+|||+.+.+||+|..+.|+++.++++...+.+.+.+ .+.+...++...
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~ 99 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQP 99 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHH
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHH
Confidence 4679999999999999999999999999999999999999999999999999998887776442 123345677899
Q ss_pred HHHHHHHHHHHHcCC--ceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCCCCC
Q 014522 96 QFIQYLESYAEKFEI--NPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDIEGLADF 173 (423)
Q Consensus 96 ~~~~~~~~~~~~~~~--~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~~~~ 173 (423)
++.+|+.+.++++++ .++++++|++++.++..+.|.|++.+ + .+++||+||+|||.++.|..|.+||++.+
T Consensus 100 ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~------G-~~i~ad~lV~AtG~~s~p~~p~ipG~~~f 172 (549)
T 4ap3_A 100 EILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDR------G-DEVSARFLVVAAGPLSNANTPAFDGLDRF 172 (549)
T ss_dssp HHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETT------C-CEEEEEEEEECCCSEEECCCCCCTTGGGC
T ss_pred HHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECC------C-CEEEeCEEEECcCCCCCCCCCCCCCcccC
Confidence 999999999999998 68999999999998866799999876 5 57999999999998889999999999989
Q ss_pred CceeeecCCCC-CCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHhhccHHH
Q 014522 174 GGEVIHACDYK-SGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPLWL 252 (423)
Q Consensus 174 ~~~~~~~~~~~-~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (423)
.+..+|+..+. +.....+++|+|||+|.+|+|+|..|++.+.+|+++.|++.+++|..+........ ..+.+.+|...
T Consensus 173 ~g~~~~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ilp~~~~~~~~~~~-~~l~~~~~~~~ 251 (549)
T 4ap3_A 173 TGDIVHTARWPHDGVDFTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANYSIPAGNVPLDDATR-AEQKANYAERR 251 (549)
T ss_dssp CSEEEEGGGCCTTCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECC----CHHHH-HHHHHTHHHHH
T ss_pred CCceEEeccccccccccCCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCcCCCCCHHHH-HHHHhccHHHH
Confidence 88889998877 46667899999999999999999999999999999999998888887654332111 11111111110
Q ss_pred HH--------------------------HHHH-------------------------HHHHHHhccccccCCCCCC----
Q 014522 253 VD--------------------------KILL-------------------------ILAWFILGNTESYGLKRPS---- 277 (423)
Q Consensus 253 ~~--------------------------~~~~-------------------------~~~~~~~~~~~~~~~~~~~---- 277 (423)
.. ++.. ...+.....+ +..+.++.
T Consensus 252 ~~~r~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~d~~~~~~ 330 (549)
T 4ap3_A 252 RLSRESGGGSPHRPHPKSALEVSEEERRAVYEERWKLGGVLFSKAFPDQLTDPAANDTARAFWEEKI-RAVVDDPAVAEL 330 (549)
T ss_dssp HHHHHSSSSSSCCCCSSCTTSSCHHHHHHHHHHHHHHCHHHHTTSSTTTTTCHHHHHHHHHHHHHHH-HHHCSCHHHHHH
T ss_pred HHHHhhccccccccCccchhcCCHHHHHHHHHHHHhhcchHHHhhhhhhhcCHHHHHHHHHHHHHHH-HHHcCCHHHHHh
Confidence 00 0000 0000000000 00011111
Q ss_pred CCcccccccCCCccccChhhhhhhhcCCeEEe---cC-ceEEeCCeEEEccCcEecccEEEEcCCCCCCCCCcccccccc
Q 014522 278 MGPLALKNTMGKTPVLDIGALKKIRSGHINVV---PG-IKRISCGQAELINGEKLDIDAIVLATGYRSNVPSWLQESEFF 353 (423)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~---~~-i~~~~~~~v~~~~g~~~~~D~vi~a~G~~~~~~~ll~~~~~~ 353 (423)
+.|. .....++++..+..+++.+.+.+|+++ .. |+++++++|+++|| ++++|+||+|||+.++. .++..+++.
T Consensus 331 l~P~-~~~~~~kR~~~~~~y~~al~~~~V~lvd~~~~~I~~it~~gv~~~dG-~~~~D~iI~ATGf~~~~-~~~~~~~i~ 407 (549)
T 4ap3_A 331 LTPK-DHAIGAKRIVLDSGYYETYNRDNVELVDLRSTPIVGMDETGIVTTGA-HYDLDMIVLATGFDAMT-GSLDKLEIV 407 (549)
T ss_dssp HSCS-SCCBTTBCCEEESSTGGGGGSTTEEEEETTTSCEEEEETTEEEESSC-EEECSEEEECCCEEESS-TTGGGSEEE
T ss_pred CCCC-CCCCCccccCCCccHHHHhcCCCEEEEeCCCCCceEEeCCcEEeCCC-ceecCEEEECCcccccc-cccCceeEE
Confidence 1111 023457788889999999999999998 55 99999999999999 99999999999999985 355555443
Q ss_pred cCCCCCCC-----C-C---CCCCCCCCceEEE-eeccc-c----CCCcchhHHHHHHHHhh
Q 014522 354 SENGFPKA-----P-F---PHGWKGNAGLYAV-GFTRR-G----LSGASSDAMRIAQDIGK 399 (423)
Q Consensus 354 ~~~g~~~~-----~-~---~~~~~~~~~vya~-Gd~~~-~----~~~a~~~g~~~a~~i~~ 399 (423)
..+|.... . . .....+.||+|.+ |.-.. + +..+-.|+.++++.|..
T Consensus 408 g~~G~~l~~~w~~~~~~y~g~~~~gfPN~f~~~Gp~~~~~~~s~~~~~e~~~~~i~~~i~~ 468 (549)
T 4ap3_A 408 GRGGRTLKETWAAGPRTYLGLGIDGFPNFFNLTGPGSPSVLANMVLHSELHVDWVADAIAY 468 (549)
T ss_dssp CGGGCBHHHHTTTSCCCBTTTBCTTCTTEEETTCTTSCGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcCHHHhhccchhhccccccCCCCcEEEEeCCCCCCcCccHHHHHHHHHHHHHHHHHH
Confidence 33332221 1 0 1223588999997 44322 1 11455677777766643
No 6
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=100.00 E-value=7.8e-38 Score=313.13 Aligned_cols=367 Identities=20% Similarity=0.281 Sum_probs=269.9
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCC----CCCCCCCCCHH
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQF----PEDFPEYPTKR 95 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 95 (423)
..+||+|||||++|+++|..|++.|++++|+|+.+.+||+|..+.|+...++.+...+.+.+.+. ..+...++...
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 94 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQP 94 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHH
Confidence 46799999999999999999999999999999999999999998999988887776665543221 11223567889
Q ss_pred HHHHHHHHHHHHcCC--ceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCCCCC
Q 014522 96 QFIQYLESYAEKFEI--NPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDIEGLADF 173 (423)
Q Consensus 96 ~~~~~~~~~~~~~~~--~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~~~~ 173 (423)
++.+|+...++++++ .++++++|++++.+++.+.|.|++.+ + .+++||+||+|||.++.|..|.+||++.+
T Consensus 95 ~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~------G-~~~~ad~vV~AtG~~s~p~~p~i~G~~~f 167 (542)
T 1w4x_A 95 EILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNH------G-DRIRARYLIMASGQLSVPQLPNFPGLKDF 167 (542)
T ss_dssp HHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETT------C-CEEEEEEEEECCCSCCCCCCCCCTTGGGC
T ss_pred HHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECC------C-CEEEeCEEEECcCCCCCCCCCCCCCcccC
Confidence 999999999999874 57889999999988765789998875 5 57999999999999889999999999888
Q ss_pred CceeeecCCCC-CCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHhhccHHH
Q 014522 174 GGEVIHACDYK-SGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPLWL 252 (423)
Q Consensus 174 ~~~~~~~~~~~-~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (423)
.+..+|+..+. +.....+++|+|||+|.+|+|++..|++.+.+|+++.|++.+++|........ +....+.+.+|...
T Consensus 168 ~G~~~hs~~~~~~~~~~~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~~~p~~~~~~~~-~~~~~~~~~~p~l~ 246 (542)
T 1w4x_A 168 AGNLYHTGNWPHEPVDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHFAVPARNAPLDP-EFLADLKKRYAEFR 246 (542)
T ss_dssp CSEEEEGGGCCSSCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECCCCBCCH-HHHHHHHTTHHHHH
T ss_pred CCceEECCCCCCchhccCCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcccccCCCCCCCH-HHHHHHHhhCHHHH
Confidence 88888988776 33556789999999999999999999999999999999997777765543321 11112211121110
Q ss_pred --------------------------HHHHH--------------------------------HHHHHHHhccccccCCC
Q 014522 253 --------------------------VDKIL--------------------------------LILAWFILGNTESYGLK 274 (423)
Q Consensus 253 --------------------------~~~~~--------------------------------~~~~~~~~~~~~~~~~~ 274 (423)
...+. ....+...++.+....
T Consensus 247 ~~~~~~~~G~~~~~d~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 325 (542)
T 1w4x_A 247 EESRNTPGGTHRYQGPKSALEVSDEELVETLERYWQEGGPDILAAYRDILRDRDANERVAEFIRNKIRNTVRDPEVAER- 325 (542)
T ss_dssp HHHHTSSSSSCCCCCCSCTTTSCHHHHHHHHHHHHHHCSGGGGGSSTTTTTCHHHHHHHHHHHHHHHHHHCSSHHHHHH-
T ss_pred HHHHhhccccccCccccchhcCCHHHHHHHHHHHHhhcchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHcCCHHHHHh-
Confidence 00000 0000000011110000
Q ss_pred CCCCCcccccccCCCccccChhhhhhhhcCCeEEe---cC-ceEEeCCeEEEccCcEecccEEEEcCCCCCCCCCccccc
Q 014522 275 RPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVV---PG-IKRISCGQAELINGEKLDIDAIVLATGYRSNVPSWLQES 350 (423)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~---~~-i~~~~~~~v~~~~g~~~~~D~vi~a~G~~~~~~~ll~~~ 350 (423)
+.|. .....++++.++..+++.+.+++|+++ .. |+++++++|+++| +++++|.||+|||+.+++ .++..+
T Consensus 326 ---l~P~-~~~~~~kr~~~~~~y~~~~~~~~v~lv~~~~~~i~~i~~~gv~~~d-~~~~~D~ii~atG~~~~~-~~~~~~ 399 (542)
T 1w4x_A 326 ---LVPK-GYPFGTKRLILEIDYYEMFNRDNVHLVDTLSAPIETITPRGVRTSE-REYELDSLVLATGFDALT-GALFKI 399 (542)
T ss_dssp ---HSCC-SSCSSSSCCEEESSHHHHTTSTTEEEEETTTSCEEEECSSEEEESS-CEEECSEEEECCCCCCTT-HHHHTS
T ss_pred ---cCCC-CCCccccCCCCCccHHHHhCCCCEEEEecCCCCceEEcCCeEEeCC-eEEecCEEEEcCCccccc-cCcCce
Confidence 0110 113457788999999999999999997 33 9999999999999 999999999999999976 455555
Q ss_pred ccccCCCCCCCC------CC---CCCCCCCceEEE-eeccc--c---CCCcchhHHHHHHHHhhhh
Q 014522 351 EFFSENGFPKAP------FP---HGWKGNAGLYAV-GFTRR--G---LSGASSDAMRIAQDIGKVW 401 (423)
Q Consensus 351 ~~~~~~g~~~~~------~~---~~~~~~~~vya~-Gd~~~--~---~~~a~~~g~~~a~~i~~~l 401 (423)
++..++|....+ .. ....+.||+|++ |+.+. . +..+.+|++++|++|....
T Consensus 400 ~i~g~~G~~l~~~w~~~~~~y~~~~v~~~Pn~f~~~G~~~~~~~~~~~~~~e~q~~~ia~~i~~~~ 465 (542)
T 1w4x_A 400 DIRGVGNVALKEKWAAGPRTYLGLSTAGFPNLFFIAGPGSPSALSNMLVSIEQHVEWVTDHIAYMF 465 (542)
T ss_dssp EEECGGGCBHHHHTTTSCCCBTTTBCTTSTTEEESSCTTSSGGGSCHHHHHHHHHHHHHHHHHHHH
T ss_pred eeECCCCCCHHHhhcCchheecccccCCCCceEEEcCCCCCcccccHHHHHHHHHHHHHHHHHHHH
Confidence 544444544332 01 223578999998 98853 1 2367889999999987654
No 7
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=100.00 E-value=7.1e-38 Score=293.68 Aligned_cols=290 Identities=18% Similarity=0.234 Sum_probs=225.9
Q ss_pred cccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHH
Q 014522 19 IWVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFI 98 (423)
Q Consensus 19 ~~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (423)
.+++||+|||||++|+++|..|++.|++|+|||+. +||.|.... ..+.++..+ .....++.
T Consensus 13 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~~~----------~~~~~~~~~-------~~~~~~~~ 73 (323)
T 3f8d_A 13 GEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTEAG----------IVDDYLGLI-------EIQASDMI 73 (323)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGGCC----------EECCSTTST-------TEEHHHHH
T ss_pred CCccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeecccc----------cccccCCCC-------CCCHHHHH
Confidence 35689999999999999999999999999999998 888876510 001111111 13678899
Q ss_pred HHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCCCCCCceee
Q 014522 99 QYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDIEGLADFGGEVI 178 (423)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~~~~~~~~~ 178 (423)
+++.+.+.+++++++. ++|++++... +.|.+.+.+ + ..+.||+||+||| +.|..|.+||...+.+..+
T Consensus 74 ~~~~~~~~~~~v~~~~-~~v~~i~~~~--~~~~v~~~~------g-~~~~~d~lvlAtG--~~~~~~~i~g~~~~~~~~~ 141 (323)
T 3f8d_A 74 KVFNKHIEKYEVPVLL-DIVEKIENRG--DEFVVKTKR------K-GEFKADSVILGIG--VKRRKLGVPGEQEFAGRGI 141 (323)
T ss_dssp HHHHHHHHTTTCCEEE-SCEEEEEEC----CEEEEESS------S-CEEEEEEEEECCC--CEECCCCCTTTTTTBTTTE
T ss_pred HHHHHHHHHcCCEEEE-EEEEEEEecC--CEEEEEECC------C-CEEEcCEEEECcC--CCCccCCCCchhhhcCCce
Confidence 9999999999999888 8899998876 677788765 4 5899999999999 6688888898877654445
Q ss_pred ecCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHhhccHHHHHHHHH
Q 014522 179 HACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPLWLVDKILL 258 (423)
Q Consensus 179 ~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (423)
+.....+.....+++++|||+|.+|+|+|..|++.|.+|+++.|.+. +++..
T Consensus 142 ~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~-~~~~~--------------------------- 193 (323)
T 3f8d_A 142 SYCSVADAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDT-FKAQP--------------------------- 193 (323)
T ss_dssp ESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSS-CCSCH---------------------------
T ss_pred EEeccCCHhHcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCC-CCcCH---------------------------
Confidence 44444444556689999999999999999999999999999999883 32211
Q ss_pred HHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhh-hhhcCCeEEecC--ceEEeCC----eEEEcc---Cc--
Q 014522 259 ILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALK-KIRSGHINVVPG--IKRISCG----QAELIN---GE-- 326 (423)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~--i~~~~~~----~v~~~~---g~-- 326 (423)
.+.+ ..++.+|+++.+ +.++..+ ++++.+ |+
T Consensus 194 -------------------------------------~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~ 236 (323)
T 3f8d_A 194 -------------------------------------IYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIK 236 (323)
T ss_dssp -------------------------------------HHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEE
T ss_pred -------------------------------------HHHHHHHhCCCcEEEeCCEEEEEeccCceeEEEEEECCCCceE
Confidence 1122 233458999887 7777765 377776 76
Q ss_pred EecccEEEEcCCCCCCCCCccccccc-ccCCCCCCCCCCCCCCCCCceEEEeecccc---CC---CcchhHHHHHHHHhh
Q 014522 327 KLDIDAIVLATGYRSNVPSWLQESEF-FSENGFPKAPFPHGWKGNAGLYAVGFTRRG---LS---GASSDAMRIAQDIGK 399 (423)
Q Consensus 327 ~~~~D~vi~a~G~~~~~~~ll~~~~~-~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~---~~---~a~~~g~~~a~~i~~ 399 (423)
++++|.||+|+|++|+. .+++.+++ .+++|++.+| ++++|+.|+|||+|||+.. .. .|..||+.+|.+|..
T Consensus 237 ~~~~D~vv~a~G~~p~~-~~~~~~g~~~~~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~ 314 (323)
T 3f8d_A 237 ELNVNGVFIEIGFDPPT-DFAKSNGIETDTNGYIKVD-EWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYR 314 (323)
T ss_dssp EEECSEEEECCCEECCH-HHHHHTTCCBCTTSSBCCC-TTCBCSSTTEEECSTTBSTTTTCCCHHHHHHHHHHHHHHHHH
T ss_pred EEEcCEEEEEECCCCCh-hHHhhcCeeecCCCcEecC-CCceecCCCEEEcceecCCCCcccceeehhhHHHHHHHHHHH
Confidence 79999999999999997 67888877 5678999999 5888999999999999874 22 789999999999999
Q ss_pred hhHHHHH
Q 014522 400 VWKEETK 406 (423)
Q Consensus 400 ~l~~~~~ 406 (423)
.+.+...
T Consensus 315 ~l~~~~~ 321 (323)
T 3f8d_A 315 YVTEKKG 321 (323)
T ss_dssp HHHHC--
T ss_pred HHHHhhc
Confidence 9986544
No 8
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=100.00 E-value=1.9e-37 Score=303.66 Aligned_cols=302 Identities=21% Similarity=0.318 Sum_probs=234.2
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCC--CEEEEecCCCCCcccccccCCce-----------------------------
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGV--PFVMLERAECIASLWQKRTYDRL----------------------------- 68 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~--~v~lie~~~~~gg~~~~~~~~~~----------------------------- 68 (423)
+.+||+|||||++|+++|..|++.|. +|+|||+.+.+||.|........
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~ 84 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPL 84 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCch
Confidence 46899999999999999999999999 99999999999999976432211
Q ss_pred ----eecCCCccccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCc-
Q 014522 69 ----NLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKT- 143 (423)
Q Consensus 69 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~- 143 (423)
..+.+...+.+..++++...+.++.+..+.+|+.+++++++..++++++|++++... +.|.|++.+..+ +.
T Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~--~~~~V~~~~~~~--G~~ 160 (447)
T 2gv8_A 85 YRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKD--GSWVVTYKGTKA--GSP 160 (447)
T ss_dssp CTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEET--TEEEEEEEESST--TCC
T ss_pred hhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCC--CeEEEEEeecCC--CCe
Confidence 111122233444555666666788899999999999998888888999999998876 778888865211 01
Q ss_pred eEEEEeCEEEEccCCCCCCcCCCCCCCCCC----CceeeecCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCc-cE
Q 014522 144 EFEYICRWLVVATGENAERVMPDIEGLADF----GGEVIHACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNAS-PS 218 (423)
Q Consensus 144 ~~~~~~d~vviAtG~~~~~~~p~~~g~~~~----~~~~~~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~-V~ 218 (423)
..++.||+||+|||.++.|..|.+||++.+ .+.++|+.++.+...+.+++|+|||+|.+|+|+|..|++.+.+ |+
T Consensus 161 ~~~~~~d~VVvAtG~~s~p~~p~i~G~~~~~~~~~g~v~~~~~~~~~~~~~~k~VvVvG~G~sg~e~A~~l~~~~~~~V~ 240 (447)
T 2gv8_A 161 ISKDIFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFREPELFVGESVLVVGGASSANDLVRHLTPVAKHPIY 240 (447)
T ss_dssp EEEEEESEEEECCCSSSSBCBCCCBTHHHHHHHSTTSEEEGGGCCCGGGGTTCCEEEECSSHHHHHHHHHHTTTSCSSEE
T ss_pred eEEEEeCEEEECCCCCCCCCCCCCCChhhhhccCCccEEEecccCChhhcCCCEEEEEccCcCHHHHHHHHHHHhCCcEE
Confidence 247999999999998889999999997653 3557888777776667889999999999999999999999999 99
Q ss_pred EEEecCceeecccccCCChHHHHHHHHhhccHHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhh
Q 014522 219 MVVRSSVHVLPREILGKSTFELATLMMKWLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGAL 298 (423)
Q Consensus 219 ~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (423)
++.|++.+
T Consensus 241 l~~r~~~~------------------------------------------------------------------------ 248 (447)
T 2gv8_A 241 QSLLGGGD------------------------------------------------------------------------ 248 (447)
T ss_dssp EECTTCCS------------------------------------------------------------------------
T ss_pred EEeCCCCc------------------------------------------------------------------------
Confidence 99998731
Q ss_pred hhhhcCCeEEecCceEEe--CCeEEEccCcE-ecccEEEEcCCCCCCCCCc-----cccc--ccccCCCCCCCCCCCCC-
Q 014522 299 KKIRSGHINVVPGIKRIS--CGQAELINGEK-LDIDAIVLATGYRSNVPSW-----LQES--EFFSENGFPKAPFPHGW- 367 (423)
Q Consensus 299 ~~~~~~~i~~~~~i~~~~--~~~v~~~~g~~-~~~D~vi~a~G~~~~~~~l-----l~~~--~~~~~~g~~~~~~~~~~- 367 (423)
+...+|.+...|.++. ..+|+++||++ +++|.||+|||++|++ .| ++.+ ++.. ++..+++ .+.+
T Consensus 249 --l~~~~i~~~~~v~~~~~~~~~v~~~dG~~~~~~D~vi~atG~~~~~-~~l~~~~l~~~~~~i~~-~~~~~~~-~~~~v 323 (447)
T 2gv8_A 249 --IQNESLQQVPEITKFDPTTREIYLKGGKVLSNIDRVIYCTGYLYSV-PFPSLAKLKSPETKLID-DGSHVHN-VYQHI 323 (447)
T ss_dssp --CBCSSEEEECCEEEEETTTTEEEETTTEEECCCSEEEECCCBCCCC-CCHHHHSCCSTTTCCCS-SSSSCCS-EETTT
T ss_pred --CCCCCeEEecCeEEEecCCCEEEECCCCEeccCCEEEECCCCCcCC-CCCcccccccccCceec-CCCcccc-ccccc
Confidence 1234666666688884 35799999986 7999999999999998 66 6654 3332 4555444 1222
Q ss_pred --CCCCceEEEeeccccC--CCcchhHHHHHHHHhhhhH
Q 014522 368 --KGNAGLYAVGFTRRGL--SGASSDAMRIAQDIGKVWK 402 (423)
Q Consensus 368 --~~~~~vya~Gd~~~~~--~~a~~~g~~~a~~i~~~l~ 402 (423)
++.|+||++||+.... ..|..||+++|.+|.+.+.
T Consensus 324 ~~~~~p~l~~~G~~~~~~~~~~a~~qa~~~a~~~~g~~~ 362 (447)
T 2gv8_A 324 FYIPDPTLAFVGLALHVVPFPTSQAQAAFLARVWSGRLK 362 (447)
T ss_dssp EETTCTTEEESSCCBSSCHHHHHHHHHHHHHHHHTTSSC
T ss_pred ccCCCCcEEEEeccccccCchHHHHHHHHHHHHHcCCCC
Confidence 6889999999998643 3688999999999988653
No 9
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=100.00 E-value=1.3e-37 Score=293.16 Aligned_cols=294 Identities=17% Similarity=0.246 Sum_probs=230.6
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHH
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQ 99 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (423)
+++||+|||||++|+++|..|++.|++|+|||+.+.+||.|.. .++...+ +.++.++ .....++..
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~-~~~~~~~------~~~~~~~-------~~~~~~~~~ 71 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSA-LYPEKYI------YDVAGFP-------KIRAQELIN 71 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHH-HCTTSEE------CCSTTCS-------SEEHHHHHH
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehh-cCCCceE------eccCCCC-------CCCHHHHHH
Confidence 4679999999999999999999999999999999999998853 1222221 1111111 125788999
Q ss_pred HHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCC-CCcCCCCCCCCCCCceee
Q 014522 100 YLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENA-ERVMPDIEGLADFGGEVI 178 (423)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~-~~~~p~~~g~~~~~~~~~ 178 (423)
++.+.+.+++++++++++|++++.... +.|.|.+.+ + ++.||+||+|||..+ .|..|.+||...+.+..+
T Consensus 72 ~~~~~~~~~~~~~~~~~~v~~i~~~~~-~~~~v~~~~------g--~~~~d~vVlAtG~~~~~p~~~~~~g~~~~~g~~~ 142 (332)
T 3lzw_A 72 NLKEQMAKFDQTICLEQAVESVEKQAD-GVFKLVTNE------E--THYSKTVIITAGNGAFKPRKLELENAEQYEGKNL 142 (332)
T ss_dssp HHHHHHTTSCCEEECSCCEEEEEECTT-SCEEEEESS------E--EEEEEEEEECCTTSCCEECCCCCTTGGGGBTTTE
T ss_pred HHHHHHHHhCCcEEccCEEEEEEECCC-CcEEEEECC------C--EEEeCEEEECCCCCcCCCCCCCCCChhhccCceE
Confidence 999999999999999999999988762 478888876 5 499999999999432 788888998877555445
Q ss_pred ecCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHhhccHHHHHHHHH
Q 014522 179 HACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPLWLVDKILL 258 (423)
Q Consensus 179 ~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (423)
+. .+.+.....+++++|||+|.+|+|+|..|++.+.+|+++.|.+. +.+...
T Consensus 143 ~~-~~~~~~~~~~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~-~~~~~~-------------------------- 194 (332)
T 3lzw_A 143 HY-FVDDLQKFAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDK-FRAHEH-------------------------- 194 (332)
T ss_dssp ES-SCSCGGGGBTCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSS-CSSCHH--------------------------
T ss_pred EE-ecCCHHHcCCCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCc-CCccHH--------------------------
Confidence 55 55555556689999999999999999999999999999999883 211110
Q ss_pred HHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeCCe----EEEcc-----CcE
Q 014522 259 ILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISCGQ----AELIN-----GEK 327 (423)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~~----v~~~~-----g~~ 327 (423)
..+.+++.+|+++.+ +.++..++ +.+.+ +++
T Consensus 195 --------------------------------------~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~ 236 (332)
T 3lzw_A 195 --------------------------------------SVENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEI 236 (332)
T ss_dssp --------------------------------------HHHHHHHSSCEEETTEEEEEEECSSSCCEEEEEETTSCCEEE
T ss_pred --------------------------------------HHHHHhcCCeEEEeCceeeEEecCCceEEEEEEecCCCceEE
Confidence 122245678888876 77777653 77776 457
Q ss_pred ecccEEEEcCCCCCCCCCcccccccccCCCCCCCCCCCCCCCCCceEEEeeccc---cC---CCcchhHHHHHHHHhhhh
Q 014522 328 LDIDAIVLATGYRSNVPSWLQESEFFSENGFPKAPFPHGWKGNAGLYAVGFTRR---GL---SGASSDAMRIAQDIGKVW 401 (423)
Q Consensus 328 ~~~D~vi~a~G~~~~~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~---~~---~~a~~~g~~~a~~i~~~l 401 (423)
+++|.||+|+|++|+. .+++.+++..++|++.+| .+++|+.|+|||+|||+. .+ ..|..||+.+|.+|...+
T Consensus 237 ~~~D~vv~a~G~~p~~-~~~~~~~~~~~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~~l 314 (332)
T 3lzw_A 237 LEIDDLIVNYGFVSSL-GPIKNWGLDIEKNSIVVK-STMETNIEGFFAAGDICTYEGKVNLIASGFGEAPTAVNNAKAYM 314 (332)
T ss_dssp EECSEEEECCCEECCC-GGGGGSSCCEETTEEECC-TTSBCSSTTEEECGGGEECTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EECCEEEEeeccCCCc-hHHhhcCccccCCeEEeC-CCCceecCCEEEccceecCCCCcceEeeehhhHHHHHHHHHHhh
Confidence 9999999999999998 678888875578999998 588899999999999983 22 268899999999999988
Q ss_pred HHH
Q 014522 402 KEE 404 (423)
Q Consensus 402 ~~~ 404 (423)
.+.
T Consensus 315 ~~~ 317 (332)
T 3lzw_A 315 DPK 317 (332)
T ss_dssp CTT
T ss_pred Chh
Confidence 754
No 10
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=100.00 E-value=1.7e-37 Score=293.07 Aligned_cols=295 Identities=17% Similarity=0.214 Sum_probs=222.8
Q ss_pred cccccCCeEEECCChHHHHHHHHHHHcCCCEEEEecC----CCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCC
Q 014522 17 RCIWVNGPVIVGAGPSGLATAACLRDQGVPFVMLERA----ECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYP 92 (423)
Q Consensus 17 ~~~~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~----~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (423)
...+++||+|||||++|+++|..|++.|++|+|||+. ..+||.|.... ....++ .++.+.
T Consensus 18 ~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~----------~~~~~~------~~~~~~ 81 (338)
T 3itj_A 18 GSHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTT----------EIENFP------GFPDGL 81 (338)
T ss_dssp ---CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSS----------EECCST------TCTTCE
T ss_pred CCCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccch----------hhcccC------CCcccC
Confidence 3356899999999999999999999999999999994 47788775421 011111 112335
Q ss_pred CHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCCCC
Q 014522 93 TKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDIEGLAD 172 (423)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~~~ 172 (423)
...++.+++.+.+.+++++++.++ |++++... +.|.+.+....+ + ..+.||+||+|+| +.+..|.+||...
T Consensus 82 ~~~~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~--~~~~v~~~~~~~---~-~~~~~d~vvlAtG--~~~~~~~~~g~~~ 152 (338)
T 3itj_A 82 TGSELMDRMREQSTKFGTEIITET-VSKVDLSS--KPFKLWTEFNED---A-EPVTTDAIILATG--ASAKRMHLPGEET 152 (338)
T ss_dssp EHHHHHHHHHHHHHHTTCEEECSC-EEEEECSS--SSEEEEETTCSS---S-CCEEEEEEEECCC--EEECCCCCTTHHH
T ss_pred CHHHHHHHHHHHHHHcCCEEEEeE-EEEEEEcC--CEEEEEEEecCC---C-cEEEeCEEEECcC--CCcCCCCCCCchh
Confidence 688999999999999999998888 99988766 777777742111 3 5799999999999 6788888888765
Q ss_pred CCceeeecCCCCCCC--CCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHhhccH
Q 014522 173 FGGEVIHACDYKSGE--KYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPL 250 (423)
Q Consensus 173 ~~~~~~~~~~~~~~~--~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (423)
+....++.+...... ...+++++|||+|.+|+|+|..|++.|.+|+++.|.+. +++.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~-~~~~-------------------- 211 (338)
T 3itj_A 153 YWQKGISACAVCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDH-LRAS-------------------- 211 (338)
T ss_dssp HBTTTEESCHHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS-CCSC--------------------
T ss_pred ccCccEEEchhcccchhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCc-cCCC--------------------
Confidence 433334444322222 45688999999999999999999999999999999883 2120
Q ss_pred HHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhh-cCCeEEecC--ceEEeCCe-----EEE
Q 014522 251 WLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIR-SGHINVVPG--IKRISCGQ-----AEL 322 (423)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~--i~~~~~~~-----v~~ 322 (423)
..+.+.+. +.+|+++.+ +.++..++ +++
T Consensus 212 --------------------------------------------~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~ 247 (338)
T 3itj_A 212 --------------------------------------------TIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRI 247 (338)
T ss_dssp --------------------------------------------HHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEE
T ss_pred --------------------------------------------HHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEE
Confidence 01223333 348999877 77776543 777
Q ss_pred cc-----CcEecccEEEEcCCCCCCCCCccccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccC----CCcchhHHH
Q 014522 323 IN-----GEKLDIDAIVLATGYRSNVPSWLQESEF-FSENGFPKAPFPHGWKGNAGLYAVGFTRRGL----SGASSDAMR 392 (423)
Q Consensus 323 ~~-----g~~~~~D~vi~a~G~~~~~~~ll~~~~~-~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~----~~a~~~g~~ 392 (423)
.+ ++++++|.||+|+|+.|+. .+++. ++ .+++|++.+++.+++|+.|+|||+|||+... ..|+.+|+.
T Consensus 248 ~~~~~g~~~~i~~D~vi~a~G~~p~~-~~~~~-~l~~~~~G~i~v~~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~ 325 (338)
T 3itj_A 248 KNTKKNEETDLPVSGLFYAIGHTPAT-KIVAG-QVDTDEAGYIKTVPGSSLTSVPGFFAAGDVQDSKYRQAITSAGSGCM 325 (338)
T ss_dssp EETTTTEEEEEECSEEEECSCEEECC-GGGBT-TBCBCTTSCBCCCTTSSBCSSTTEEECGGGGCSSCCCHHHHHHHHHH
T ss_pred EECCCCceEEEEeCEEEEEeCCCCCh-hHhhC-ceEecCCCcEEEcCcccccCCCCEEEeeccCCCCccceeeehhhhHH
Confidence 66 4689999999999999997 66655 66 5678999864478899999999999999642 278999999
Q ss_pred HHHHHhhhhHH
Q 014522 393 IAQDIGKVWKE 403 (423)
Q Consensus 393 ~a~~i~~~l~~ 403 (423)
+|.+|...+.+
T Consensus 326 aa~~i~~~l~~ 336 (338)
T 3itj_A 326 AALDAEKYLTS 336 (338)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHhc
Confidence 99999998864
No 11
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=1.3e-36 Score=281.69 Aligned_cols=283 Identities=17% Similarity=0.214 Sum_probs=220.4
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHH
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQ 99 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (423)
|++||+|||||++|+++|..|++.|++|+|+|+.+..+..+.. ...++ . .......++..
T Consensus 1 m~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~-------------~~~~~-----~--~~~~~~~~~~~ 60 (297)
T 3fbs_A 1 MKFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASH-------------SHGFL-----G--QDGKAPGEIIA 60 (297)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSC-------------CCSST-----T--CTTCCHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchh-------------hcCCc-----C--CCCCCHHHHHH
Confidence 4679999999999999999999999999999997643322110 00010 0 12357788899
Q ss_pred HHHHHHHHc-CCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCCCCCCceee
Q 014522 100 YLESYAEKF-EINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDIEGLADFGGEVI 178 (423)
Q Consensus 100 ~~~~~~~~~-~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~~~~~~~~~ 178 (423)
++.+.+.++ ++. +.+++|+.++..+ +.|.|.+.+ + .++.||+||+||| +.|..|.+||...+.+...
T Consensus 61 ~~~~~~~~~~~v~-~~~~~v~~i~~~~--~~~~v~~~~------g-~~~~~d~vviAtG--~~~~~~~~~g~~~~~~~~~ 128 (297)
T 3fbs_A 61 EARRQIERYPTIH-WVEGRVTDAKGSF--GEFIVEIDG------G-RRETAGRLILAMG--VTDELPEIAGLRERWGSAV 128 (297)
T ss_dssp HHHHHHTTCTTEE-EEESCEEEEEEET--TEEEEEETT------S-CEEEEEEEEECCC--CEEECCCCBTTGGGBTTTE
T ss_pred HHHHHHHhcCCeE-EEEeEEEEEEEcC--CeEEEEECC------C-CEEEcCEEEECCC--CCCCCCCCCCchhhcCCee
Confidence 999988887 455 4456899999876 678888876 4 5899999999999 6788888999876554445
Q ss_pred ecCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHhhccHHHHHHHHH
Q 014522 179 HACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPLWLVDKILL 258 (423)
Q Consensus 179 ~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (423)
+.+.+.......+++++|||+|.+|+|+|..|++.| +|+++.+.+..+
T Consensus 129 ~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~~~------------------------------- 176 (297)
T 3fbs_A 129 FHCPYCHGYELDQGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIVEP------------------------------- 176 (297)
T ss_dssp ESCHHHHTGGGTTCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTCCC-------------------------------
T ss_pred EEcccCcchhhcCCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCCCC-------------------------------
Confidence 555444445566899999999999999999999998 999998887300
Q ss_pred HHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC-ceEEeCC-eEEEccCcEecccEEEEc
Q 014522 259 ILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG-IKRISCG-QAELINGEKLDIDAIVLA 336 (423)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-i~~~~~~-~v~~~~g~~~~~D~vi~a 336 (423)
...+.+.+++.+|+++.. +.++..+ .+.+.+|+++++|.||+|
T Consensus 177 -----------------------------------~~~~~~~l~~~gv~i~~~~v~~i~~~~~v~~~~g~~~~~D~vi~a 221 (297)
T 3fbs_A 177 -----------------------------------DADQHALLAARGVRVETTRIREIAGHADVVLADGRSIALAGLFTQ 221 (297)
T ss_dssp -----------------------------------CHHHHHHHHHTTCEEECSCEEEEETTEEEEETTSCEEEESEEEEC
T ss_pred -----------------------------------CHHHHHHHHHCCcEEEcceeeeeecCCeEEeCCCCEEEEEEEEEc
Confidence 111344455678888754 7888876 789999999999999999
Q ss_pred CCCCCCCCCcccccccc-c--CCC-CCCCCCCCCCCCCCceEEEeeccccCC---CcchhHHHHHHHHhhhhHH
Q 014522 337 TGYRSNVPSWLQESEFF-S--ENG-FPKAPFPHGWKGNAGLYAVGFTRRGLS---GASSDAMRIAQDIGKVWKE 403 (423)
Q Consensus 337 ~G~~~~~~~ll~~~~~~-~--~~g-~~~~~~~~~~~~~~~vya~Gd~~~~~~---~a~~~g~~~a~~i~~~l~~ 403 (423)
+|+.|+. .|++.+++. + +.| ++.+| .+++|+.|+|||+|||+..+. .|+.||+.+|.+|...+..
T Consensus 222 ~G~~p~~-~~~~~~g~~~~~~~~G~~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~~~l~~ 293 (297)
T 3fbs_A 222 PKLRITV-DWIEKLGCAVEEGPMGSTIVTD-PMKQTTARGIFACGDVARPAGSVALAVGDGAMAGAAAHRSILF 293 (297)
T ss_dssp CEEECCC-SCHHHHTCCEEEETTEEEECCC-TTCBCSSTTEEECSGGGCTTCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred cCcccCc-hhHHhcCCccccCCCCceEEeC-CCCccCCCCEEEEeecCCchHHHHHHHHhHHHHHHHHHHHHhh
Confidence 9999998 678877763 3 357 88888 578899999999999998433 7999999999999988864
No 12
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=100.00 E-value=2.4e-36 Score=283.85 Aligned_cols=289 Identities=21% Similarity=0.292 Sum_probs=218.5
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHH
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQ 99 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (423)
.++||+|||||++|+++|..|++.|++|+|||+. .+||.|..... ...++.+ +.......+.+
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~----------~~~~~~~------~~~~~~~~~~~ 69 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAWSEE----------VENFPGF------PEPIAGMELAQ 69 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGCSC----------BCCSTTC------SSCBCHHHHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCcccccccc----------cccCCCC------CCCCCHHHHHH
Confidence 4679999999999999999999999999999998 67887754210 0011111 11246788899
Q ss_pred HHHHHHHHcCCceeccceEEEEEEe--CCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCCCCCCcee
Q 014522 100 YLESYAEKFEINPRFNECVQSARYD--ETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDIEGLADFGGEV 177 (423)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~v~~v~~~--~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~~~~~~~~ 177 (423)
++.+.+.+++++++. ++|++++.. .. ..|.|.+.+ + ..+.||+||+||| +.|..|.+||.+.+.+..
T Consensus 70 ~l~~~~~~~gv~~~~-~~v~~i~~~~~~~-~~~~v~~~~------g-~~~~~~~vv~AtG--~~~~~~~i~g~~~~~~~~ 138 (325)
T 2q7v_A 70 RMHQQAEKFGAKVEM-DEVQGVQHDATSH-PYPFTVRGY------N-GEYRAKAVILATG--ADPRKLGIPGEDNFWGKG 138 (325)
T ss_dssp HHHHHHHHTTCEEEE-CCEEEEEECTTSS-SCCEEEEES------S-CEEEEEEEEECCC--EEECCCCCTTTTTTBTTT
T ss_pred HHHHHHHHcCCEEEe-eeEEEEEeccCCC-ceEEEEECC------C-CEEEeCEEEECcC--CCcCCCCCCChhhccCce
Confidence 999999999999776 689999876 31 226676655 4 5899999999999 677788888877654433
Q ss_pred eecCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHhhccHHHHHHHH
Q 014522 178 IHACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPLWLVDKIL 257 (423)
Q Consensus 178 ~~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (423)
++.+...+.....+++++|||+|.+|+|+|..|++.|.+|+++.|++. +.+..
T Consensus 139 ~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~-~~~~~-------------------------- 191 (325)
T 2q7v_A 139 VSTCATCDGFFYKGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDT-LRANK-------------------------- 191 (325)
T ss_dssp EESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS-CCSCH--------------------------
T ss_pred EEEeccCCHHHcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCc-CCcch--------------------------
Confidence 444433333345678999999999999999999999999999999873 21100
Q ss_pred HHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhh-hcCCeEEecC--ceEEeCC----eEEEc---cCc-
Q 014522 258 LILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKI-RSGHINVVPG--IKRISCG----QAELI---NGE- 326 (423)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~--i~~~~~~----~v~~~---~g~- 326 (423)
.+.+.+ ++.+|+++.+ +.++..+ ++.+. +|+
T Consensus 192 --------------------------------------~~~~~l~~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~ 233 (325)
T 2q7v_A 192 --------------------------------------VAQARAFANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEV 233 (325)
T ss_dssp --------------------------------------HHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCE
T ss_pred --------------------------------------HHHHHHHhcCCceEecCCceEEEccCCcEEEEEEEECCCCcE
Confidence 011222 3458998877 7777654 46665 675
Q ss_pred -EecccEEEEcCCCCCCCCCccccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccC-C---CcchhHHHHHHHHhhh
Q 014522 327 -KLDIDAIVLATGYRSNVPSWLQESEF-FSENGFPKAPFPHGWKGNAGLYAVGFTRRGL-S---GASSDAMRIAQDIGKV 400 (423)
Q Consensus 327 -~~~~D~vi~a~G~~~~~~~ll~~~~~-~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~-~---~a~~~g~~~a~~i~~~ 400 (423)
++++|.||+|+|++|+. .+++.+ + .+++|++.+| ++++|+.|+|||+|||+... . .|..||+.+|.+|.+.
T Consensus 234 ~~i~~D~vi~a~G~~p~~-~~l~~~-~~~~~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~ 310 (325)
T 2q7v_A 234 SELATDGVFIFIGHVPNT-AFVKDT-VSLRDDGYVDVR-DEIYTNIPMLFAAGDVSDYIYRQLATSVGAGTRAAMMTERQ 310 (325)
T ss_dssp EEEECSEEEECSCEEESC-GGGTTT-SCBCTTSCBCCB-TTTBCSSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCEEEEccCCCCCh-HHHhhh-cccCCCccEecC-CCCccCCCCEEEeecccCccHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999998 666665 5 4568999998 46889999999999998742 2 6899999999999999
Q ss_pred hHHH
Q 014522 401 WKEE 404 (423)
Q Consensus 401 l~~~ 404 (423)
+.+.
T Consensus 311 l~~~ 314 (325)
T 2q7v_A 311 LAAL 314 (325)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 8754
No 13
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=100.00 E-value=2.3e-36 Score=282.13 Aligned_cols=286 Identities=20% Similarity=0.257 Sum_probs=216.9
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCC-CEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGV-PFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQ 99 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~-~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (423)
++||+|||||++|+++|..|++.|+ +|+|+|+. ..||.|..... ...++. ++.......+.+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~~~~~~----------~~~~~~------~~~~~~~~~~~~ 63 (311)
T 2q0l_A 1 MIDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQITGSSE----------IENYPG------VKEVVSGLDFMQ 63 (311)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGGGGCSC----------BCCSTT------CCSCBCHHHHHH
T ss_pred CceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCcccccccc----------cccCCC------CcccCCHHHHHH
Confidence 4689999999999999999999999 99999995 56777654210 001111 122357788999
Q ss_pred HHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCCCCCCceeee
Q 014522 100 YLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDIEGLADFGGEVIH 179 (423)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~~~~~~~~~~ 179 (423)
++.+.+.+++++++. ++|++++... +.|.+.+.+ + ..+.||+||+||| +.|..|.+||...+.+..++
T Consensus 64 ~l~~~~~~~~v~~~~-~~v~~i~~~~--~~~~v~~~~------g-~~~~~~~vv~AtG--~~~~~~~~~g~~~~~~~~~~ 131 (311)
T 2q0l_A 64 PWQEQCFRFGLKHEM-TAVQRVSKKD--SHFVILAED------G-KTFEAKSVIIATG--GSPKRTGIKGESEYWGKGVS 131 (311)
T ss_dssp HHHHHHHTTSCEEEC-SCEEEEEEET--TEEEEEETT------S-CEEEEEEEEECCC--EEECCCCCBTHHHHBTTTEE
T ss_pred HHHHHHHHcCCEEEE-EEEEEEEEcC--CEEEEEEcC------C-CEEECCEEEECCC--CCCCCCCCCChhhccCCcEE
Confidence 999999999998877 7899998876 677787765 4 5799999999999 77778888887544333344
Q ss_pred cCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHhhccHHHHHHHHHH
Q 014522 180 ACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPLWLVDKILLI 259 (423)
Q Consensus 180 ~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (423)
.+...+.....+++++|||+|.+|+|+|..|++.|.+|+++.|++. +.. .
T Consensus 132 ~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~-~~~--~--------------------------- 181 (311)
T 2q0l_A 132 TCATCDGFFYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDG-FRC--A--------------------------- 181 (311)
T ss_dssp SCHHHHGGGGTTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSS-CCS--C---------------------------
T ss_pred EeecCChhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCc-cCC--C---------------------------
Confidence 4333333345679999999999999999999999999999999873 210 0
Q ss_pred HHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhh-hcCCeEEecC--ceEEeCC-----eEEEc---cCc--
Q 014522 260 LAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKI-RSGHINVVPG--IKRISCG-----QAELI---NGE-- 326 (423)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~--i~~~~~~-----~v~~~---~g~-- 326 (423)
..+.+.+ ++.+|+++.+ +.++..+ ++.+. +|+
T Consensus 182 -----------------------------------~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~ 226 (311)
T 2q0l_A 182 -----------------------------------PITLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKR 226 (311)
T ss_dssp -----------------------------------HHHHHHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEE
T ss_pred -----------------------------------HHHHHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceE
Confidence 0012223 2468998876 6777643 46665 675
Q ss_pred EecccEEEEcCCCCCCCCCcccccc----c-ccCCCCCCCCCCCCCCCCCceEEEeecccc-C---CCcchhHHHHHHHH
Q 014522 327 KLDIDAIVLATGYRSNVPSWLQESE----F-FSENGFPKAPFPHGWKGNAGLYAVGFTRRG-L---SGASSDAMRIAQDI 397 (423)
Q Consensus 327 ~~~~D~vi~a~G~~~~~~~ll~~~~----~-~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~-~---~~a~~~g~~~a~~i 397 (423)
++++|.||+|+|++|++ .+++.++ + .+++|++.+| ++++|+.|+|||+|||+.. + ..|+.||+.+|.+|
T Consensus 227 ~i~~D~vi~a~G~~p~~-~~l~~~g~~~~l~~~~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i 304 (311)
T 2q0l_A 227 ELVVPGFFIFVGYDVNN-AVLKQEDNSMLCKCDEYGSIVVD-FSMKTNVQGLFAAGDIRIFAPKQVVCAASDGATAALSV 304 (311)
T ss_dssp EEECSEEEECSCEEECC-GGGBCTTSCBSSCBCTTSCBCCC-TTCBCSSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHH
T ss_pred EEecCEEEEEecCccCh-hhhhcccccceeEeccCCCEEeC-CccccCCCCeEEcccccCcchHHHHHHHHhHHHHHHHH
Confidence 78999999999999998 6777664 6 4668999999 5788999999999999874 2 26899999999999
Q ss_pred hhhhH
Q 014522 398 GKVWK 402 (423)
Q Consensus 398 ~~~l~ 402 (423)
.+.+.
T Consensus 305 ~~~l~ 309 (311)
T 2q0l_A 305 ISYLE 309 (311)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 98775
No 14
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=100.00 E-value=9.7e-37 Score=284.83 Aligned_cols=290 Identities=20% Similarity=0.278 Sum_probs=204.9
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHH
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQ 99 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (423)
+.|||+||||||||++||..|+++|++|+|||+. .+||.+.... ....++.+ ......++..
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~-~~gG~~~~~~----------~i~~~p~~-------~~~~~~~~~~ 66 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIERG-IPGGQMANTE----------EVENFPGF-------EMITGPDLST 66 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGCS----------CBCCSTTC-------SSBCHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC-CCCCeeeccc----------ccCCcCCc-------cccchHHHHH
Confidence 5799999999999999999999999999999985 5666543210 01111111 1235566777
Q ss_pred HHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCCCCCCceeee
Q 014522 100 YLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDIEGLADFGGEVIH 179 (423)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~~~~~~~~~~ 179 (423)
.......+....+..+..+....... .. +...+ + .+++||+||+||| +.|+.|.+||++.+.+..++
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~------~-~~~~~d~liiAtG--s~~~~~~ipG~~~~~~~~v~ 133 (312)
T 4gcm_A 67 KMFEHAKKFGAVYQYGDIKSVEDKGE---YK-VINFG------N-KELTAKAVIIATG--AEYKKIGVPGEQELGGRGVS 133 (312)
T ss_dssp HHHHHHHHTTCEEEECCCCEEEECSS---CE-EEECS------S-CEEEEEEEEECCC--EEECCCCCTTTTTTBTTTEE
T ss_pred HHHHHHhhccccccceeeeeeeeeec---ce-eeccC------C-eEEEeceeEEccc--CccCcCCCCChhhhCCccEE
Confidence 66666777776666665554443322 22 33332 3 6899999999999 88999999998876655555
Q ss_pred cCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHhhccHHHHHHHHHH
Q 014522 180 ACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPLWLVDKILLI 259 (423)
Q Consensus 180 ~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (423)
.+...+.....+++++|||+|++|+|+|..|++.|.+|+++.|.+ .+++....
T Consensus 134 ~~~~~~~~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~~~~~~~-------------------------- 186 (312)
T 4gcm_A 134 YCAVCDGAFFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRD-ELRAQRIL-------------------------- 186 (312)
T ss_dssp SCHHHHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS-SCCSCHHH--------------------------
T ss_pred eeeccCccccCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeccc-ccCcchhH--------------------------
Confidence 555444555678999999999999999999999999999999998 44332221
Q ss_pred HHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEe--CC---e--E-E--EccCcE
Q 014522 260 LAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRIS--CG---Q--A-E--LINGEK 327 (423)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~--~~---~--v-~--~~~g~~ 327 (423)
....+.+.++..... +.... .. . . . ..++..
T Consensus 187 -------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (312)
T 4gcm_A 187 -------------------------------------QDRAFKNDKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEET 229 (312)
T ss_dssp -------------------------------------HHHHHHCTTEEEECSEEEEEEEEETTEEEEEEEEETTTCCEEE
T ss_pred -------------------------------------HHHHHHhcCcceeeecceeeeeccccccccceeeeecCCceeE
Confidence 001112223333222 11110 00 0 1 1 123347
Q ss_pred ecccEEEEcCCCCCCCCCcccccccccCCCCCCCCCCCCCCCCCceEEEeecccc-CC---CcchhHHHHHHHHhhhhHH
Q 014522 328 LDIDAIVLATGYRSNVPSWLQESEFFSENGFPKAPFPHGWKGNAGLYAVGFTRRG-LS---GASSDAMRIAQDIGKVWKE 403 (423)
Q Consensus 328 ~~~D~vi~a~G~~~~~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~-~~---~a~~~g~~~a~~i~~~l~~ 403 (423)
+++|.|++++|..|+. .+++..++.+++|++.+| ++++|+.|+|||+|||+.. .. .|+.||+.+|.+|.++|..
T Consensus 230 ~~~d~v~~~~g~~~~~-~~~~~~g~~~~~G~I~vd-~~~~Ts~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~~i~~~L~~ 307 (312)
T 4gcm_A 230 HEADGVFIYIGMKPLT-APFKDLGITNDVGYIVTK-DDMTTSVPGIFAAGDVRDKGLRQIVTATGDGSIAAQSAAEYIEH 307 (312)
T ss_dssp EECSEEEECSCEEESC-GGGGGGTCBCTTSCBCCC-TTSBCSSTTEEECSTTBSCSCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeeeeEEeecCCCcCc-hhHHhcceecCCCeEeeC-CCCccCCCCEEEEeecCCCcchHHHHHHHHHHHHHHHHHHHHHh
Confidence 8999999999999997 778888888889999999 6899999999999999863 22 6899999999999999876
Q ss_pred HHH
Q 014522 404 ETK 406 (423)
Q Consensus 404 ~~~ 406 (423)
...
T Consensus 308 l~~ 310 (312)
T 4gcm_A 308 LND 310 (312)
T ss_dssp HHH
T ss_pred hcc
Confidence 543
No 15
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=100.00 E-value=3.4e-36 Score=281.26 Aligned_cols=290 Identities=18% Similarity=0.260 Sum_probs=222.5
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEE-EecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHH
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVM-LERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFI 98 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~l-ie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (423)
.++||+|||||++|+++|..|++.|++|+| +|+ +.+||.|..... ...++ .++......++.
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~~~~----------~~~~~------~~~~~~~~~~~~ 65 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITSSSE----------IENYP------GVAQVMDGISFM 65 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGGCSC----------BCCST------TCCSCBCHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeeeece----------eccCC------CCCCCCCHHHHH
Confidence 468999999999999999999999999999 999 677887754210 00111 112234788999
Q ss_pred HHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCCCCCCceee
Q 014522 99 QYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDIEGLADFGGEVI 178 (423)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~~~~~~~~~ 178 (423)
.++.+.+.+++++++.+ +|+++ .+...+.|.+.+.. +. .+.||+||+||| +.|..|.+||...+.+..+
T Consensus 66 ~~~~~~~~~~~v~~~~~-~v~~i-~~~~~~~~~v~~~~------~~-~~~~d~lvlAtG--~~~~~~~~~g~~~~~~~~~ 134 (315)
T 3r9u_A 66 APWSEQCMRFGLKHEMV-GVEQI-LKNSDGSFTIKLEG------GK-TELAKAVIVCTG--SAPKKAGFKGEDEFFGKGV 134 (315)
T ss_dssp HHHHHHHTTTCCEEECC-CEEEE-EECTTSCEEEEETT------SC-EEEEEEEEECCC--EEECCCCCBTTTTTBTTTE
T ss_pred HHHHHHHHHcCcEEEEE-EEEEE-ecCCCCcEEEEEec------CC-EEEeCEEEEeeC--CCCCCCCCCChhhcCCCeE
Confidence 99999999999998777 78888 55433567654544 33 899999999999 7888888999887655556
Q ss_pred ecCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHhhccHHHHHHHHH
Q 014522 179 HACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPLWLVDKILL 258 (423)
Q Consensus 179 ~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (423)
+.+.........+++++|||+|.+|+|+|..|++.+.+|+++.+.+. +....
T Consensus 135 ~~~~~~~~~~~~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~-~~~~~--------------------------- 186 (315)
T 3r9u_A 135 STCATCDGFFYKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDE-FRAAP--------------------------- 186 (315)
T ss_dssp ESCHHHHGGGGTTSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSS-CBSCH---------------------------
T ss_pred EeeecccccccCcCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCC-CCCCH---------------------------
Confidence 66555444556789999999999999999999999999999999883 21100
Q ss_pred HHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeCCe-----EEEc--cCc--E
Q 014522 259 ILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISCGQ-----AELI--NGE--K 327 (423)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~~-----v~~~--~g~--~ 327 (423)
..+.+.+++.+|+++.+ +.++..++ +++. +|+ +
T Consensus 187 ------------------------------------~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~ 230 (315)
T 3r9u_A 187 ------------------------------------STVEKVKKNEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRD 230 (315)
T ss_dssp ------------------------------------HHHHHHHHCTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEE
T ss_pred ------------------------------------HHHHHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEE
Confidence 00122234678998876 67776443 6666 776 8
Q ss_pred ecccEEEEcCCCCCCCCCcccc---cc-c-ccCCCCCCCCCCCCCCCCCceEEEeecccc-C---CCcchhHHHHHHHHh
Q 014522 328 LDIDAIVLATGYRSNVPSWLQE---SE-F-FSENGFPKAPFPHGWKGNAGLYAVGFTRRG-L---SGASSDAMRIAQDIG 398 (423)
Q Consensus 328 ~~~D~vi~a~G~~~~~~~ll~~---~~-~-~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~-~---~~a~~~g~~~a~~i~ 398 (423)
+++|.||+|+|++|+. .+++. ++ + .+++|++.+| ++++|+.|+|||+|||+.. + ..|+.||+.+|.+|.
T Consensus 231 ~~~D~vv~a~G~~p~~-~~~~~~~~~g~l~~~~~g~i~vd-~~~~t~~~~v~a~GD~~~~~~~~~~~A~~~g~~aa~~i~ 308 (315)
T 3r9u_A 231 LNVPGIFTFVGLNVRN-EILKQDDSKFLCNMEEGGQVSVD-LKMQTSVAGLFAAGDLRKDAPKQVICAAGDGAVAALSAM 308 (315)
T ss_dssp ECCSCEEECSCEEECC-GGGBCTTSCBSSCBCTTSCBCCC-TTCBCSSTTEEECGGGBTTCCCCHHHHHHHHHHHHHHHH
T ss_pred eecCeEEEEEcCCCCc-hhhhcccccceeeecCCCcEEeC-CCcccCCCCEEEeecccCCchhhhhhHHhhHHHHHHHHH
Confidence 9999999999999997 55554 44 6 5667999999 5888999999999999842 2 279999999999999
Q ss_pred hhhHH
Q 014522 399 KVWKE 403 (423)
Q Consensus 399 ~~l~~ 403 (423)
..+.+
T Consensus 309 ~~l~~ 313 (315)
T 3r9u_A 309 AYIES 313 (315)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 98865
No 16
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=4.2e-36 Score=283.31 Aligned_cols=297 Identities=20% Similarity=0.260 Sum_probs=223.2
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
++||+|||||++|+++|..|++.|++|+|||+.+.+||.|... ++... .+..+.++ .....++.++
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~-~~~~~------~~~~~~~~-------~~~~~~~~~~ 70 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTAL-YPEKY------IYDVAGFP-------KVYAKDLVKG 70 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHT-CTTSE------ECCSTTCS-------SEEHHHHHHH
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeecc-CCCce------eeccCCCC-------CCCHHHHHHH
Confidence 5799999999999999999999999999999999999888542 21111 11111111 1256788888
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCC-CCcCCCCCCCCCCCceeee
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENA-ERVMPDIEGLADFGGEVIH 179 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~-~~~~p~~~g~~~~~~~~~~ 179 (423)
+.+.+.++++.++++++|+.++... +.|.|.+.+ + ..+.||+||+|||..+ .|..|.++|...+.+..++
T Consensus 71 l~~~~~~~~~~~~~~~~v~~i~~~~--~~~~v~~~~------g-~~~~~~~lv~AtG~~~~~p~~~~i~g~~~~~~~~~~ 141 (335)
T 2zbw_A 71 LVEQVAPFNPVYSLGERAETLEREG--DLFKVTTSQ------G-NAYTAKAVIIAAGVGAFEPRRIGAPGEREFEGRGVY 141 (335)
T ss_dssp HHHHHGGGCCEEEESCCEEEEEEET--TEEEEEETT------S-CEEEEEEEEECCTTSEEEECCCCCTTTTTTBTTTEE
T ss_pred HHHHHHHcCCEEEeCCEEEEEEECC--CEEEEEECC------C-CEEEeCEEEECCCCCCCCCCCCCCCChhhccCcEEE
Confidence 8888888899988999999999876 578788765 4 5799999999999432 5777778887655432222
Q ss_pred cCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHhhccHHHHHHHHHH
Q 014522 180 ACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPLWLVDKILLI 259 (423)
Q Consensus 180 ~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (423)
.. ..+.....+++++|||+|.+|+|+|..|++.|.+|+++.|++. +++... .
T Consensus 142 ~~-~~~~~~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~-~~~~~~-------~------------------- 193 (335)
T 2zbw_A 142 YA-VKSKAEFQGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQ-FRAHEA-------S------------------- 193 (335)
T ss_dssp SS-CSCGGGGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSS-CCSCHH-------H-------------------
T ss_pred Ee-cCchhhcCCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCc-cCccHH-------H-------------------
Confidence 22 2222334688999999999999999999999999999999883 322110 0
Q ss_pred HHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeCC----eEEEc---cC--cEe
Q 014522 260 LAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISCG----QAELI---NG--EKL 328 (423)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~----~v~~~---~g--~~~ 328 (423)
...+.+.+++.+|+++.+ +.++..+ ++.+. +| +++
T Consensus 194 ----------------------------------~~~l~~~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i 239 (335)
T 2zbw_A 194 ----------------------------------VKELMKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEELAL 239 (335)
T ss_dssp ----------------------------------HHHHHHHHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCCEEEE
T ss_pred ----------------------------------HHHHHhccccCCeEEecCCcceeEccCCCeeEEEEEECCCCceEEE
Confidence 011234455678998887 7777654 47776 67 579
Q ss_pred cccEEEEcCCCCCCCCCcccccccccCCCCCCCCCCCCCCCCCceEEEeeccccC------CCcchhHHHHHHHHhhhhH
Q 014522 329 DIDAIVLATGYRSNVPSWLQESEFFSENGFPKAPFPHGWKGNAGLYAVGFTRRGL------SGASSDAMRIAQDIGKVWK 402 (423)
Q Consensus 329 ~~D~vi~a~G~~~~~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~------~~a~~~g~~~a~~i~~~l~ 402 (423)
++|.||+|+|++|+. .+++.+++..++|++.+| ++++|+.|+|||+|||+... ..|..||..+|.+|.+.+.
T Consensus 240 ~~D~vi~a~G~~p~~-~~l~~~~~~~~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~ 317 (335)
T 2zbw_A 240 EVDAVLILAGYITKL-GPLANWGLALEKNKIKVD-TTMATSIPGVYACGDIVTYPGKLPLIVLGFGEAAIAANHAAAYAN 317 (335)
T ss_dssp ECSEEEECCCEEEEC-GGGGGSCCCEETTEEECC-TTCBCSSTTEEECSTTEECTTCCCCHHHHHHHHHHHHHHHHHHHC
T ss_pred ecCEEEEeecCCCCc-hHhhhcceeccCCeeeeC-CCCCCCCCCEEEeccccccCcchhhhhhhHHHHHHHHHHHHHHhh
Confidence 999999999999997 677877774447888888 57889999999999998521 2578899999999998876
Q ss_pred HH
Q 014522 403 EE 404 (423)
Q Consensus 403 ~~ 404 (423)
..
T Consensus 318 ~~ 319 (335)
T 2zbw_A 318 PA 319 (335)
T ss_dssp TT
T ss_pred hh
Confidence 43
No 17
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=100.00 E-value=4.6e-36 Score=281.13 Aligned_cols=286 Identities=19% Similarity=0.294 Sum_probs=214.2
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHH
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQ 99 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (423)
+.+||+|||||++|+++|..|++.|++|+|+|+. .+||.|..... ...++.+ .......+.+
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~----------~~~~~~~-------~~~~~~~~~~ 76 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKA-VAGGLTAEAPL----------VENYLGF-------KSIVGSELAK 76 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTGGGGGCSC----------BCCBTTB-------SSBCHHHHHH
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCC-CCCccccccch----------hhhcCCC-------cccCHHHHHH
Confidence 4689999999999999999999999999999994 56776643210 0001110 1245677888
Q ss_pred HHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCCCCCCceeee
Q 014522 100 YLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDIEGLADFGGEVIH 179 (423)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~~~~~~~~~~ 179 (423)
++.+.+.+++++++. ++|..++... +.|.|.+. + ..+.||+||+|+| +.+..|.+||...+.+..++
T Consensus 77 ~~~~~~~~~~v~~~~-~~v~~i~~~~--~~~~v~~~-------~-~~~~~~~li~AtG--~~~~~~~i~g~~~~~~~~~~ 143 (319)
T 3cty_A 77 LFADHAANYAKIREG-VEVRSIKKTQ--GGFDIETN-------D-DTYHAKYVIITTG--TTHKHLGVKGESEYFGKGTS 143 (319)
T ss_dssp HHHHHHHTTSEEEET-CCEEEEEEET--TEEEEEES-------S-SEEEEEEEEECCC--EEECCCCCBTTTTTBTTTEE
T ss_pred HHHHHHHHcCCEEEE-eeEEEEEEeC--CEEEEEEC-------C-CEEEeCEEEECCC--CCcccCCCCChHHhCCceEE
Confidence 888888888988777 7899998876 66777763 2 4799999999999 67778888887654333233
Q ss_pred cCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHhhccHHHHHHHHHH
Q 014522 180 ACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPLWLVDKILLI 259 (423)
Q Consensus 180 ~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (423)
.....+.....+++++|||+|.+|+|+|..|++.+.+|+++.|.+. +.+.
T Consensus 144 ~~~~~~~~~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~-~~~~----------------------------- 193 (319)
T 3cty_A 144 YCSTCDGYLFKGKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPK-YMCE----------------------------- 193 (319)
T ss_dssp SCHHHHGGGGBTSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSS-CCSC-----------------------------
T ss_pred EEEecchhhcCCCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCc-cCCC-----------------------------
Confidence 3322222335678999999999999999999999999999999873 2110
Q ss_pred HHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeCC-----eEEEc---cCc--E
Q 014522 260 LAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISCG-----QAELI---NGE--K 327 (423)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~-----~v~~~---~g~--~ 327 (423)
..+.+.+.+.+|+++.+ +.++..+ ++.+. +|+ +
T Consensus 194 -----------------------------------~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~ 238 (319)
T 3cty_A 194 -----------------------------------NAYVQEIKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKL 238 (319)
T ss_dssp -----------------------------------HHHHHHHHHTTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEE
T ss_pred -----------------------------------HHHHHHHhcCCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEE
Confidence 01122333567787766 6666543 36665 565 6
Q ss_pred ecccEEEEcCCCCCCCCCccccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccC-C---CcchhHHHHHHHHhhhhH
Q 014522 328 LDIDAIVLATGYRSNVPSWLQESEF-FSENGFPKAPFPHGWKGNAGLYAVGFTRRGL-S---GASSDAMRIAQDIGKVWK 402 (423)
Q Consensus 328 ~~~D~vi~a~G~~~~~~~ll~~~~~-~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~-~---~a~~~g~~~a~~i~~~l~ 402 (423)
+++|.||+|+|+.|+. .+++.+++ .+++|++.+| ++++|+.|+|||+|||+... . .|+.||+.+|.+|.+.+.
T Consensus 239 i~~D~vi~a~G~~p~~-~~l~~~gl~~~~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~ 316 (319)
T 3cty_A 239 IETDGVFIYVGLIPQT-SFLKDSGVKLDERGYIVVD-SRQRTSVPGVYAAGDVTSGNFAQIASAVGDGCKAALSLYSDSI 316 (319)
T ss_dssp ECCSEEEECCCEEECC-GGGTTSCCCBCTTSCBCCC-TTCBCSSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred EecCEEEEeeCCccCh-HHHhhccccccCCccEeCC-CCCccCCCCEEEeecccCcchhhHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999998 77787777 5668999998 56889999999999998752 2 689999999999998875
Q ss_pred H
Q 014522 403 E 403 (423)
Q Consensus 403 ~ 403 (423)
+
T Consensus 317 ~ 317 (319)
T 3cty_A 317 S 317 (319)
T ss_dssp C
T ss_pred c
Confidence 3
No 18
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=100.00 E-value=4.7e-36 Score=279.08 Aligned_cols=288 Identities=15% Similarity=0.240 Sum_probs=206.5
Q ss_pred ccccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHH
Q 014522 18 CIWVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQF 97 (423)
Q Consensus 18 ~~~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (423)
.+..|||+||||||||++||..|+++|++|+|||+.. +||.+..+ ++.+... ......++
T Consensus 3 ~M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~-~gg~~~~~---------------~~~~~~~----~~~~~~~~ 62 (304)
T 4fk1_A 3 AMKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT-NRNRVTQN---------------SHGFITR----DGIKPEEF 62 (304)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC-CGGGGSSC---------------BCCSTTC----TTBCHHHH
T ss_pred CCCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC-CCCeeeee---------------cCCccCC----CCCCHHHH
Confidence 3467999999999999999999999999999999975 44432211 1111100 11345666
Q ss_pred HHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCCCCCCcee
Q 014522 98 IQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDIEGLADFGGEV 177 (423)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~~~~~~~~ 177 (423)
.+...+...+++...+....+..+..... +.|.+.+.+ + .+++||+|||||| +.|+.|++||.+.+.+..
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~------g-~~~~a~~liiATG--s~p~~p~i~G~~~~~~~~ 132 (304)
T 4fk1_A 63 KEIGLNEVMKYPSVHYYEKTVVMITKQST-GLFEIVTKD------H-TKYLAERVLLATG--MQEEFPSIPNVREYYGKS 132 (304)
T ss_dssp HHHHHHHHTTSTTEEEEECCEEEEEECTT-SCEEEEETT------C-CEEEEEEEEECCC--CEEECCSCTTHHHHBTTT
T ss_pred HHHHHHHHHhcCCEEEEeeEEEEeeecCC-CcEEEEECC------C-CEEEeCEEEEccC--CccccccccCccccccce
Confidence 66666666666655566666766665442 667788776 4 6899999999999 889999999977654444
Q ss_pred eecCCCCCCCCCCCCEEEEECCCCC-HHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHhhccHHHHHHH
Q 014522 178 IHACDYKSGEKYKGKKVLVVGCGNS-GMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPLWLVDKI 256 (423)
Q Consensus 178 ~~~~~~~~~~~~~~~~v~ViG~G~~-~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (423)
++.+...+.....+++++|||+|.. ++|+|..+.+.+.+|+++.+.+. +.+
T Consensus 133 v~~~~~~~~~~~~~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~~-~~~--------------------------- 184 (304)
T 4fk1_A 133 LFSCPYCDGWELKDQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGNE-LSQ--------------------------- 184 (304)
T ss_dssp EESCHHHHSGGGTTSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSCC-CCH---------------------------
T ss_pred eeeccccchhHhcCCceeeecCCCchhhhHHHHHHhCCceEEEEecccc-chh---------------------------
Confidence 4544444444556778888888864 67899999888999998877662 110
Q ss_pred HHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC-ceEEeCC-----eEEEccCcEecc
Q 014522 257 LLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG-IKRISCG-----QAELINGEKLDI 330 (423)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-i~~~~~~-----~v~~~~g~~~~~ 330 (423)
.+.+.+.+.++.++.+ +..+..+ .+.+.+|+++++
T Consensus 185 ---------------------------------------~~~~~l~~~g~~~~~~~v~~~~~~~~~~~~v~~~~g~~i~~ 225 (304)
T 4fk1_A 185 ---------------------------------------TIMDELSNKNIPVITESIRTLQGEGGYLKKVEFHSGLRIER 225 (304)
T ss_dssp ---------------------------------------HHHHHHHTTTCCEECSCEEEEESGGGCCCEEEETTSCEECC
T ss_pred ---------------------------------------hhhhhhhccceeEeeeeEEEeecCCCeeeeeeccccceeee
Confidence 1122233445555544 4444432 377899999999
Q ss_pred cEEEEcCCCCCCCCCccccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccC----CCcchhHHHHHHHHhhhhHHH
Q 014522 331 DAIVLATGYRSNVPSWLQESEF-FSENGFPKAPFPHGWKGNAGLYAVGFTRRGL----SGASSDAMRIAQDIGKVWKEE 404 (423)
Q Consensus 331 D~vi~a~G~~~~~~~ll~~~~~-~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~----~~a~~~g~~~a~~i~~~l~~~ 404 (423)
|.++++.|..|+. .+++.+++ .+++|++.+| ++++|+.|+|||+|||+... ..|+.||+.+|..|.++|..+
T Consensus 226 ~~~vi~~g~~~~~-~~~~~~g~~~~~~G~I~vd-~~~~Ts~p~IyA~GDv~~~~~~~~~~A~~~G~~AA~~i~~~L~~e 302 (304)
T 4fk1_A 226 AGGFIVPTFFRPN-QFIEQLGCELQSNGTFVID-DFGRTSEKNIYLAGETTTQGPSSLIIAASQGNKAAIAINSDITDE 302 (304)
T ss_dssp CEEEECCEEECSS-CHHHHTTCCCCTTSSSCSS-TTCBCSSTTEEECSHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cceeeeeccccCC-hhhhhcCeEECCCCCEEEC-cCCccCCCCEEEEeccCCCcchHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999988888876 67788888 6778999999 68899999999999998532 268899999999999998764
No 19
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=100.00 E-value=1.7e-35 Score=281.98 Aligned_cols=300 Identities=20% Similarity=0.246 Sum_probs=222.7
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHH
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQ 99 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (423)
+++||+|||||++|+++|..|++.|++|+|||+.+.+||.|... ++... .+..+.++ ......+.+
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~-~~~~~------~~~~~~~~-------~~~~~~~~~ 78 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAAL-YPEKH------IYDVAGFP-------EVPAIDLVE 78 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHT-CTTSE------ECCSTTCS-------SEEHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccc-CCCcc------cccCCCCC-------CCCHHHHHH
Confidence 36799999999999999999999999999999999999887532 11111 11111110 125678888
Q ss_pred HHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCC-CCcCCCCCC-CCCCCcee
Q 014522 100 YLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENA-ERVMPDIEG-LADFGGEV 177 (423)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~-~~~~p~~~g-~~~~~~~~ 177 (423)
++.+.+.++++.++++++|+.++.... +.|.|++.+ + ..+.||+||+|||..+ .|..|.++| .+.+.+..
T Consensus 79 ~l~~~~~~~~~~~~~~~~v~~i~~~~~-~~~~v~~~~------g-~~~~~~~li~AtG~~~~~~~~~~i~g~~~~~~~~~ 150 (360)
T 3ab1_A 79 SLWAQAERYNPDVVLNETVTKYTKLDD-GTFETRTNT------G-NVYRSRAVLIAAGLGAFEPRKLPQLGNIDHLTGSS 150 (360)
T ss_dssp HHHHHHHTTCCEEECSCCEEEEEECTT-SCEEEEETT------S-CEEEEEEEEECCTTCSCCBCCCGGGCCCTTTBTTT
T ss_pred HHHHHHHHhCCEEEcCCEEEEEEECCC-ceEEEEECC------C-cEEEeeEEEEccCCCcCCCCCCCCCCchhhCcCce
Confidence 998888888999999999999988652 378788765 4 5799999999999543 567777888 65554432
Q ss_pred eecCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHhhccHHHHHHHH
Q 014522 178 IHACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPLWLVDKIL 257 (423)
Q Consensus 178 ~~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (423)
++.. ........+++++|||+|.+|+|+|..|++.+.+|+++.|.+. +.+...
T Consensus 151 v~~~-~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~-~~~~~~------------------------- 203 (360)
T 3ab1_A 151 VYYA-VKSVEDFKGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHE-FQGHGK------------------------- 203 (360)
T ss_dssp EESS-CSCGGGGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSS-CSSCSH-------------------------
T ss_pred EEEe-cCCHHHcCCCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCC-CCCCHH-------------------------
Confidence 3322 2222344688999999999999999999999999999999873 222110
Q ss_pred HHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeCC-----eEEEc--cC--c
Q 014522 258 LILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISCG-----QAELI--NG--E 326 (423)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~-----~v~~~--~g--~ 326 (423)
....+.+..++.+|+++.+ +.++..+ ++.+. +| +
T Consensus 204 -----------------------------------~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~ 248 (360)
T 3ab1_A 204 -----------------------------------TAHEVERARANGTIDVYLETEVASIEESNGVLTRVHLRSSDGSKW 248 (360)
T ss_dssp -----------------------------------HHHSSHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEEETTCCEE
T ss_pred -----------------------------------HHHHHHHHhhcCceEEEcCcCHHHhccCCCceEEEEEEecCCCeE
Confidence 0111233455678999887 6777643 46664 77 5
Q ss_pred EecccEEEEcCCCCCCCCCcccccccccCCCCCCCCCCCCCCCCCceEEEeecccc---C---CCcchhHHHHHHHHhhh
Q 014522 327 KLDIDAIVLATGYRSNVPSWLQESEFFSENGFPKAPFPHGWKGNAGLYAVGFTRRG---L---SGASSDAMRIAQDIGKV 400 (423)
Q Consensus 327 ~~~~D~vi~a~G~~~~~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~---~---~~a~~~g~~~a~~i~~~ 400 (423)
++++|.||+|+|+.|+. .+++.+++..++|++.+| .+++|+.|+|||+|||+.. . ..|..||..+|.+|.+.
T Consensus 249 ~i~~D~vi~a~G~~p~~-~~l~~~~~~~~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~~ 326 (360)
T 3ab1_A 249 TVEADRLLILIGFKSNL-GPLARWDLELYENALVVD-SHMKTSVDGLYAAGDIAYYPGKLKIIQTGLSEATMAVRHSLSY 326 (360)
T ss_dssp EEECSEEEECCCBCCSC-GGGGGSSCCEETTEEECC-TTSBCSSTTEEECSTTEECTTCCCSHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCEEEECCCCCCCH-HHHHhhccccccCeeeec-CCCcCCCCCEEEecCccCCCCccceeehhHHHHHHHHHHHHhh
Confidence 79999999999999997 677877774347888888 4788999999999999852 1 26889999999999988
Q ss_pred hHHHH
Q 014522 401 WKEET 405 (423)
Q Consensus 401 l~~~~ 405 (423)
+....
T Consensus 327 l~~~~ 331 (360)
T 3ab1_A 327 IKPGE 331 (360)
T ss_dssp HSCC-
T ss_pred cCCcc
Confidence 76533
No 20
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=8.1e-36 Score=281.40 Aligned_cols=292 Identities=17% Similarity=0.245 Sum_probs=218.7
Q ss_pred cccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHH
Q 014522 19 IWVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFI 98 (423)
Q Consensus 19 ~~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (423)
.+++||+|||||++|+++|..|++.|++|+|||+. .+||.|..... ...++. ++.......+.
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~----------~~~~~~------~~~~~~~~~~~ 74 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGALMTTTD----------VENYPG------FRNGITGPELM 74 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGGGSCSC----------BCCSTT------CTTCBCHHHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCceeccch----------hhhcCC------CCCCCCHHHHH
Confidence 35689999999999999999999999999999975 66776643210 001111 11123567888
Q ss_pred HHHHHHHHHcCCceeccceEEEEEEeCCCCeEEE-EEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCCCCCCcee
Q 014522 99 QYLESYAEKFEINPRFNECVQSARYDETSGLWRV-KTASSAGSTKTEFEYICRWLVVATGENAERVMPDIEGLADFGGEV 177 (423)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v-~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~~~~~~~~ 177 (423)
+++.+.+.+++++++.++ |.+++. . +.|.| .+.+ + .++.||+||+||| +.|..|.+||...+.+..
T Consensus 75 ~~l~~~~~~~~v~~~~~~-v~~i~~-~--~~~~v~~~~~------g-~~~~~d~lviAtG--~~~~~~~i~g~~~~~~~~ 141 (335)
T 2a87_A 75 DEMREQALRFGADLRMED-VESVSL-H--GPLKSVVTAD------G-QTHRARAVILAMG--AAARYLQVPGEQELLGRG 141 (335)
T ss_dssp HHHHHHHHHTTCEEECCC-EEEEEC-S--SSSEEEEETT------S-CEEEEEEEEECCC--EEECCCCCTHHHHTBTTT
T ss_pred HHHHHHHHHcCCEEEEee-EEEEEe-C--CcEEEEEeCC------C-CEEEeCEEEECCC--CCccCCCCCchHhccCCc
Confidence 999999999999988876 888876 3 55667 6654 4 5899999999999 677788888866543333
Q ss_pred eecCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHhhccHHHHHHHH
Q 014522 178 IHACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPLWLVDKIL 257 (423)
Q Consensus 178 ~~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (423)
++.+.........+++++|||+|.+|+|+|..|++.|.+|+++.|++. +....
T Consensus 142 ~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~-~~~~~-------------------------- 194 (335)
T 2a87_A 142 VSSCATCDGFFFRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDE-FRASK-------------------------- 194 (335)
T ss_dssp EESCHHHHGGGGTTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSS-CSSCT--------------------------
T ss_pred eEEeeccchhhcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCc-CCccH--------------------------
Confidence 444333222335679999999999999999999999999999999873 21100
Q ss_pred HHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhh-hhhhcCCeEEecC--ceEEeCCe----EEEc---cC--
Q 014522 258 LILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGAL-KKIRSGHINVVPG--IKRISCGQ----AELI---NG-- 325 (423)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~--i~~~~~~~----v~~~---~g-- 325 (423)
.+. +.+++.+|+++.+ +.++..++ +.+. +|
T Consensus 195 --------------------------------------~~~~~~~~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~ 236 (335)
T 2a87_A 195 --------------------------------------IMLDRARNNDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAE 236 (335)
T ss_dssp --------------------------------------THHHHHHHCTTEEEECSEEEEEEECSSSCCEEEEEEETTSCC
T ss_pred --------------------------------------HHHHHHhccCCcEEEeCceeEEEecCCcEeEEEEEEcCCCce
Confidence 011 2234678999877 77777654 6665 35
Q ss_pred cEecccEEEEcCCCCCCCCCccccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccC----CCcchhHHHHHHHHhhh
Q 014522 326 EKLDIDAIVLATGYRSNVPSWLQESEF-FSENGFPKAPFPHGWKGNAGLYAVGFTRRGL----SGASSDAMRIAQDIGKV 400 (423)
Q Consensus 326 ~~~~~D~vi~a~G~~~~~~~ll~~~~~-~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~----~~a~~~g~~~a~~i~~~ 400 (423)
+++++|.||+|+|++|++ .+++ .++ .+++|++.+|..+++|+.|+|||+|||+... ..|+.+|+.+|.+|...
T Consensus 237 ~~i~~D~vi~a~G~~p~~-~~~~-~~l~~~~~G~i~vd~~~~~t~~~~iya~GD~~~~~~~~~~~A~~~g~~aA~~i~~~ 314 (335)
T 2a87_A 237 TTLPVTGVFVAIGHEPRS-GLVR-EAIDVDPDGYVLVQGRTTSTSLPGVFAAGDLVDRTYRQAVTAAGSGCAAAIDAERW 314 (335)
T ss_dssp EEECCSCEEECSCEEECC-TTTB-TTBCBCTTSCBCCSTTSSBCSSTTEEECGGGTCCSCCCHHHHHHHHHHHHHHHHHH
T ss_pred EEeecCEEEEccCCccCh-hHhh-cccccCCCccEEeCCCCCccCCCCEEEeeecCCccHHHHHHHHHhHHHHHHHHHHH
Confidence 479999999999999997 5655 355 4668999999556789999999999998752 26889999999999999
Q ss_pred hHHHHHH
Q 014522 401 WKEETKQ 407 (423)
Q Consensus 401 l~~~~~~ 407 (423)
+...+.+
T Consensus 315 l~~~~~~ 321 (335)
T 2a87_A 315 LAEHAAT 321 (335)
T ss_dssp HHHHHHC
T ss_pred hhcCcCc
Confidence 9876643
No 21
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=100.00 E-value=6.1e-36 Score=279.61 Aligned_cols=292 Identities=16% Similarity=0.230 Sum_probs=200.0
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHH
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQ 99 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (423)
.+|||+||||||||++||..|+++|++|+|||+... ||.+..+..+ .......++. ++......++..
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~-gg~~~~G~~~-----~~~~i~~~~g------~~~~i~~~~l~~ 70 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMA-GGVAAGGQLT-----TTTIIENFPG------FPNGIDGNELMM 70 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSG-GGCCTTCGGG-----GSSEECCSTT------CTTCEEHHHHHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC-CCcccCCCcC-----ChHHhhhccC------CcccCCHHHHHH
Confidence 468999999999999999999999999999998753 3322211110 0011111111 122346778888
Q ss_pred HHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCCCCCCceeee
Q 014522 100 YLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDIEGLADFGGEVIH 179 (423)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~~~~~~~~~~ 179 (423)
.+.+.+.+++..+... .|....... ..+.+.+.+ + ..+.||+||+||| +.|+.|.+||.+.......+
T Consensus 71 ~~~~~~~~~~~~~~~~-~v~~~~~~~--~~~~~~~~~------~-~~~~~~~liiATG--~~~~~~~ipG~~~~~~~~~~ 138 (314)
T 4a5l_A 71 NMRTQSEKYGTTIITE-TIDHVDFST--QPFKLFTEE------G-KEVLTKSVIIATG--ATAKRMHVPGEDKYWQNGVS 138 (314)
T ss_dssp HHHHHHHHTTCEEECC-CEEEEECSS--SSEEEEETT------C-CEEEEEEEEECCC--EEECCCCCTTHHHHBTTTEE
T ss_pred HHHHHHhhcCcEEEEe-EEEEeecCC--CceEEEECC------C-eEEEEeEEEEccc--ccccccCCCcccccccccee
Confidence 8888888888875544 465555544 555566554 3 6899999999999 78888999997654443344
Q ss_pred cCCCCC--CCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHhhccHHHHHHHH
Q 014522 180 ACDYKS--GEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPLWLVDKIL 257 (423)
Q Consensus 180 ~~~~~~--~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (423)
.+.... .....+++++|||+|.+|+|+|..|++.|.+|+++.|.+... +... .
T Consensus 139 ~~~~~~~~~~~~~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~~-~~~~-------~----------------- 193 (314)
T 4a5l_A 139 ACAICDGAVPIFRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFR-ASKT-------M----------------- 193 (314)
T ss_dssp SCHHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC-SCHH-------H-----------------
T ss_pred eehhhhhhhhhcCCCeEEEECCChHHHHHHHHHHHhCCeeeeeccccccc-ccch-------h-----------------
Confidence 433322 233467899999999999999999999999999999887321 1110 0
Q ss_pred HHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeC-----CeEEE-----ccC
Q 014522 258 LILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISC-----GQAEL-----ING 325 (423)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~-----~~v~~-----~~g 325 (423)
........+++.+.. +.++.. +++.+ .++
T Consensus 194 ---------------------------------------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 234 (314)
T 4a5l_A 194 ---------------------------------------QERVLNHPKIEVIWNSELVELEGDGDLLNGAKIHNLVSGEY 234 (314)
T ss_dssp ---------------------------------------HHHHHTCTTEEEECSEEEEEEEESSSSEEEEEEEETTTCCE
T ss_pred ---------------------------------------hhhhhcccceeeEeeeeeEEEEeeeeccceeEEeecccccc
Confidence 011111223333322 222221 12222 345
Q ss_pred cEecccEEEEcCCCCCCCCCcccccccccCCCCCCCCCCCCCCCCCceEEEeeccccCC----CcchhHHHHHHHHhhhh
Q 014522 326 EKLDIDAIVLATGYRSNVPSWLQESEFFSENGFPKAPFPHGWKGNAGLYAVGFTRRGLS----GASSDAMRIAQDIGKVW 401 (423)
Q Consensus 326 ~~~~~D~vi~a~G~~~~~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~----~a~~~g~~~a~~i~~~l 401 (423)
+++++|.|++|+|++||+ .+++.....+++|+++++ +++|+.|+|||+|||+.... .|+.+|+.+|.++.++|
T Consensus 235 ~~i~~d~vi~a~G~~pn~-~~l~~~~~~~~~G~iv~~--~~~Ts~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~~~~~yL 311 (314)
T 4a5l_A 235 KVVPVAGLFYAIGHSPNS-KFLGGQVKTADDGYILTE--GPKTSVDGVFACGDVCDRVYRQAIVAAGSGCMAALSCEKWL 311 (314)
T ss_dssp EEEECSEEEECSCEEESC-GGGTTSSCBCTTSCBCCB--TTBCSSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred eeeccccceEecccccCh-hHhcccceEcCCeeEeCC--CCccCCCCEEEEEeccCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 689999999999999998 666554446778988655 68999999999999987543 58899999999999887
Q ss_pred H
Q 014522 402 K 402 (423)
Q Consensus 402 ~ 402 (423)
+
T Consensus 312 ~ 312 (314)
T 4a5l_A 312 Q 312 (314)
T ss_dssp H
T ss_pred h
Confidence 5
No 22
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=100.00 E-value=2.4e-35 Score=275.11 Aligned_cols=287 Identities=18% Similarity=0.258 Sum_probs=216.0
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
++||+|||||++|+++|..|++.|++++|+|+ ..||.|.... . +..+. ...+.....+.++
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~--~~gG~~~~~~----~---------~~~~~----~~~~~~~~~~~~~ 61 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGE--RFGGQILDTV----D---------IENYI----SVPKTEGQKLAGA 61 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECS--STTGGGGGCC----E---------ECCBT----TBSSEEHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeC--CCCceecccc----c---------ccccc----CcCCCCHHHHHHH
Confidence 36899999999999999999999999999986 4677775321 0 00000 0112356788899
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCC-CCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCCCCCCceeee
Q 014522 101 LESYAEKFEINPRFNECVQSARYDET-SGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDIEGLADFGGEVIH 179 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~-~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~~~~~~~~~~ 179 (423)
+.+.+++++++++.+++|+.++.... .+.|.|++.+ + ..+.||+||+||| +.|..|.+||...+.+..++
T Consensus 62 ~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~------g-~~~~~~~lv~AtG--~~~~~~~~~g~~~~~~~~~~ 132 (310)
T 1fl2_A 62 LKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETAS------G-AVLKARSIIVATG--AKWRNMNVPGEDQYRTKGVT 132 (310)
T ss_dssp HHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETT------S-CEEEEEEEEECCC--EEECCCCCTTTTTTBTTTEE
T ss_pred HHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECC------C-CEEEeCEEEECcC--CCcCCCCCCChhhcccceeE
Confidence 99999999999999999999976532 2468788765 4 5799999999999 66777788887765443344
Q ss_pred cCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHhhccHHHHHHHHHH
Q 014522 180 ACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPLWLVDKILLI 259 (423)
Q Consensus 180 ~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (423)
.+.........+++++|||+|.+|+|+|..|++.+.+|+++.|.+. +. ..
T Consensus 133 ~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~-~~--~~--------------------------- 182 (310)
T 1fl2_A 133 YCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE-MK--AD--------------------------- 182 (310)
T ss_dssp SCHHHHGGGGBTCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSS-CC--SC---------------------------
T ss_pred EeccCcHhhcCCCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcc-cC--cc---------------------------
Confidence 4433223345688999999999999999999999999999999883 21 00
Q ss_pred HHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhc-CCeEEecC--ceEEeCC-----eEEEcc---Cc--
Q 014522 260 LAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRS-GHINVVPG--IKRISCG-----QAELIN---GE-- 326 (423)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~--i~~~~~~-----~v~~~~---g~-- 326 (423)
..+.+.+.+ .+|+++.+ +.++..+ ++.+.+ |+
T Consensus 183 -----------------------------------~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~ 227 (310)
T 1fl2_A 183 -----------------------------------QVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIH 227 (310)
T ss_dssp -----------------------------------HHHHHHHHTCTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEE
T ss_pred -----------------------------------HHHHHHHhhCCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEE
Confidence 012222334 58898877 7777654 466654 53
Q ss_pred EecccEEEEcCCCCCCCCCccccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccC----CCcchhHHHHHHHHhhhh
Q 014522 327 KLDIDAIVLATGYRSNVPSWLQESEF-FSENGFPKAPFPHGWKGNAGLYAVGFTRRGL----SGASSDAMRIAQDIGKVW 401 (423)
Q Consensus 327 ~~~~D~vi~a~G~~~~~~~ll~~~~~-~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~----~~a~~~g~~~a~~i~~~l 401 (423)
++++|.||+|+|++|+. .+++.. + .+++|++.+| ++++|+.|+|||+|||+... ..|+.+|+.+|.+|...+
T Consensus 228 ~i~~D~vi~a~G~~p~~-~~l~~~-l~~~~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l 304 (310)
T 1fl2_A 228 NIELAGIFVQIGLLPNT-NWLEGA-VERNRMGEIIID-AKCETNVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAFDYL 304 (310)
T ss_dssp EEECSEEEECSCEEESC-GGGTTT-SCBCTTSCBCCC-TTCBCSSTTEEECSTTBSCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEcCEEEEeeCCccCc-hHHhcc-ccccCCCcEEcC-CCCccCCCCEEEeecccCCcchhhhhhHhhHHHHHHHHHHHH
Confidence 78999999999999997 566653 5 4668999998 46789999999999999754 268999999999999988
Q ss_pred HH
Q 014522 402 KE 403 (423)
Q Consensus 402 ~~ 403 (423)
.+
T Consensus 305 ~~ 306 (310)
T 1fl2_A 305 IR 306 (310)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 23
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=100.00 E-value=2.8e-35 Score=277.50 Aligned_cols=292 Identities=17% Similarity=0.230 Sum_probs=215.0
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEec----CCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHH
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLER----AECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKR 95 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~----~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (423)
..+||+|||||++|+++|..|++.|++|+|+|+ ....||.|.... ....++. ++......
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~----------~~~~~~~------~~~~~~~~ 70 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTT----------DVENFPG------FPEGILGV 70 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCS----------EECCSTT------CTTCEEHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeecc----------ccccCCC------CccCCCHH
Confidence 357999999999999999999999999999998 455666553311 0011111 11223567
Q ss_pred HHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCCCC---
Q 014522 96 QFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDIEGLAD--- 172 (423)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~~~--- 172 (423)
.+..++.+.+.+.+++++.++ |..++... +.|.|++ + + ..++||+||+||| +.+..|.+||...
T Consensus 71 ~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~--~~~~v~~-~------~-~~~~~~~vv~A~G--~~~~~~~~~g~~~~~~ 137 (333)
T 1vdc_A 71 ELTDKFRKQSERFGTTIFTET-VTKVDFSS--KPFKLFT-D------S-KAILADAVILAIG--AVAKRLSFVGSGEVLG 137 (333)
T ss_dssp HHHHHHHHHHHHTTCEEECCC-CCEEECSS--SSEEEEC-S------S-EEEEEEEEEECCC--EEECCCCCBTCSSSSS
T ss_pred HHHHHHHHHHHHCCCEEEEeE-EEEEEEcC--CEEEEEE-C------C-cEEEcCEEEECCC--CCcCCCCCCCcccccc
Confidence 888899999999999988876 88887755 6677776 3 4 6899999999999 6677788888765
Q ss_pred -CCceeeecCCCCCCCC--CCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHhhcc
Q 014522 173 -FGGEVIHACDYKSGEK--YKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLP 249 (423)
Q Consensus 173 -~~~~~~~~~~~~~~~~--~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (423)
+.+..++.+....... ..+++++|||+|.+|+|+|..|++.|.+|+++.|++. +.+..
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~-~~~~~------------------ 198 (333)
T 1vdc_A 138 GFWNRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDA-FRASK------------------ 198 (333)
T ss_dssp CCBTTTEESCHHHHTTSGGGTTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSS-CCSCH------------------
T ss_pred ccccCcEEEeccCccchhhcCCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCc-CCccH------------------
Confidence 3323344333222222 5678999999999999999999999999999999883 21100
Q ss_pred HHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhh-hhhhcCCeEEecC--ceEEeCCe-------
Q 014522 250 LWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGAL-KKIRSGHINVVPG--IKRISCGQ------- 319 (423)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~--i~~~~~~~------- 319 (423)
.+. +.+++.+|+++.+ +.++..++
T Consensus 199 ----------------------------------------------~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~ 232 (333)
T 1vdc_A 199 ----------------------------------------------IMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGG 232 (333)
T ss_dssp ----------------------------------------------HHHHHHHTCTTEEEECSEEEEEEEESSSSSSEEE
T ss_pred ----------------------------------------------HHHHHHHhCCCeeEecCCceEEEeCCCCccceee
Confidence 011 2234678998876 77776432
Q ss_pred EEEc---cC--cEecccEEEEcCCCCCCCCCccccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccCC----Ccchh
Q 014522 320 AELI---NG--EKLDIDAIVLATGYRSNVPSWLQESEF-FSENGFPKAPFPHGWKGNAGLYAVGFTRRGLS----GASSD 389 (423)
Q Consensus 320 v~~~---~g--~~~~~D~vi~a~G~~~~~~~ll~~~~~-~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~----~a~~~ 389 (423)
+.+. +| +++++|.||+|+|++|+. .+++ .++ .+++|++.+|..+++|+.|+|||+|||+.... .|+.+
T Consensus 233 v~~~~~~~g~~~~i~~D~vi~a~G~~p~~-~~~~-~~l~~~~~G~i~vd~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~ 310 (333)
T 1vdc_A 233 LKVKNVVTGDVSDLKVSGLFFAIGHEPAT-KFLD-GGVELDSDGYVVTKPGTTQTSVPGVFAAGDVQDKKYRQAITAAGT 310 (333)
T ss_dssp EEEEETTTCCEEEEECSEEEECSCEEESC-GGGT-TSSCBCTTSCBCCCTTSCBCSSTTEEECGGGGCSSCCCHHHHHHH
T ss_pred EEEEecCCCceEEEecCEEEEEeCCccch-HHhh-ccccccCCCCEEechhhcccCCCCEEEeeeccCCCchhHHHHHHh
Confidence 6665 35 479999999999999997 5655 345 45689999985557899999999999987532 68999
Q ss_pred HHHHHHHHhhhhHHHHHH
Q 014522 390 AMRIAQDIGKVWKEETKQ 407 (423)
Q Consensus 390 g~~~a~~i~~~l~~~~~~ 407 (423)
|+.+|.+|...+.+...+
T Consensus 311 g~~aa~~i~~~l~~~~~~ 328 (333)
T 1vdc_A 311 GCMAALDAEHYLQEIGSQ 328 (333)
T ss_dssp HHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHhcccc
Confidence 999999999999765543
No 24
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=7.8e-35 Score=278.35 Aligned_cols=309 Identities=18% Similarity=0.247 Sum_probs=214.8
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCC-CEEEEecCCCCCcccccccCCceeecCCC---ccccCCCCCC--CCC------C
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGV-PFVMLERAECIASLWQKRTYDRLNLHLPK---QFCQLPKLQF--PED------F 88 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~-~v~lie~~~~~gg~~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~------~ 88 (423)
.+||+|||||++|+++|..|++.|. +|+|||+.+ +||.|....... .+..+. ..+.+..... +.. .
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 81 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHWPKST-RTITPSFTSNGFGMPDMNAISMDTSPAFTFN 81 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTSCTTC-BCSSCCCCCGGGTCCCTTCSSTTCCHHHHHC
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccCcccc-cccCcchhcccCCchhhhhcccccccccccc
Confidence 4689999999999999999999999 999999988 898876432111 111111 1111111110 111 1
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCC
Q 014522 89 PEYPTKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDIE 168 (423)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~ 168 (423)
..++....+..|+.+.+++++++++++++|++++..+ +.|.|.+.+ + ++.||+||+|||.+..| .+|
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~--~~~~v~~~~------g--~~~~d~vVlAtG~~~~p---~ip 148 (369)
T 3d1c_A 82 EEHISGETYAEYLQVVANHYELNIFENTVVTNISADD--AYYTIATTT------E--TYHADYIFVATGDYNFP---KKP 148 (369)
T ss_dssp CSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECS--SSEEEEESS------C--CEEEEEEEECCCSTTSB---CCC
T ss_pred ccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECC--CeEEEEeCC------C--EEEeCEEEECCCCCCcc---CCC
Confidence 2346778899999999999999999999999998865 578787765 4 58999999999965444 344
Q ss_pred CCCCCCceeeecCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHhhc
Q 014522 169 GLADFGGEVIHACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMKWL 248 (423)
Q Consensus 169 g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (423)
+ +..+|...+.......+++++|||+|.+|+|+|..|++.|.+|+++.|++.+..+..+... .+
T Consensus 149 ~-----~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~~d~~~-----------~~ 212 (369)
T 3d1c_A 149 F-----KYGIHYSEIEDFDNFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSV-----------RL 212 (369)
T ss_dssp S-----SSCEEGGGCSCGGGSCSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC----------CTT-----------SC
T ss_pred C-----CceechhhcCChhhcCCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCCCCCCc-----------cC
Confidence 4 2345655555544556789999999999999999999999999999998832212111100 01
Q ss_pred cHHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCC-eEEecC--ceEE--eCCe--EE
Q 014522 249 PLWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGH-INVVPG--IKRI--SCGQ--AE 321 (423)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~--i~~~--~~~~--v~ 321 (423)
+.. ....+.+.+++.+ |+++.+ +.++ ..+. +.
T Consensus 213 ~~~-----------------------------------------~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~~~~~v~ 251 (369)
T 3d1c_A 213 SPY-----------------------------------------TRQRLGNVIKQGARIEMNVHYTVKDIDFNNGQYHIS 251 (369)
T ss_dssp CHH-----------------------------------------HHHHHHHHHHTTCCEEEECSCCEEEEEEETTEEEEE
T ss_pred CHH-----------------------------------------HHHHHHHHHhhCCcEEEecCcEEEEEEecCCceEEE
Confidence 111 1122344455665 999876 7777 4443 67
Q ss_pred EccCcEec-ccEEEEcCCCCCCCCCcccccccccCCCCCCCCCCCCCCCCCceEEEeeccccCC-------CcchhHHHH
Q 014522 322 LINGEKLD-IDAIVLATGYRSNVPSWLQESEFFSENGFPKAPFPHGWKGNAGLYAVGFTRRGLS-------GASSDAMRI 393 (423)
Q Consensus 322 ~~~g~~~~-~D~vi~a~G~~~~~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~-------~a~~~g~~~ 393 (423)
+.+|++++ +|.||+|+|++|+. .++.+.++.+++|++.++..+++|+.|+|||+||++.... .+.+||+++
T Consensus 252 ~~~g~~~~~~d~vi~a~G~~~~~-~~~~~~~~~~~~g~i~v~~~~~~t~~~~v~a~GD~~~~~~~~~~~~~~~~~~a~~~ 330 (369)
T 3d1c_A 252 FDSGQSVHTPHEPILATGFDATK-NPIVQQLFVTTNQDIKLTTHDESTRYPNIFMIGATVENDNAKLCYIYKFRARFAVL 330 (369)
T ss_dssp ESSSCCEEESSCCEECCCBCGGG-SHHHHHHSCCTTSCCCBCTTSBBSSSTTEEECSTTCCCSSCCCCSHHHHGGGHHHH
T ss_pred ecCCeEeccCCceEEeeccCCcc-chhhhhhccCCCCCEEechhhcccCCCCeEEeccccccCCeeEEEEehhhHHHHHH
Confidence 78888775 69999999999997 3444433446688888886668899999999999986421 356889999
Q ss_pred HHHHhhhhH
Q 014522 394 AQDIGKVWK 402 (423)
Q Consensus 394 a~~i~~~l~ 402 (423)
|++|.+.+.
T Consensus 331 a~~l~~~~~ 339 (369)
T 3d1c_A 331 AHLLTQREG 339 (369)
T ss_dssp HHHHHHHTT
T ss_pred HHHHhcccC
Confidence 999998775
No 25
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=100.00 E-value=3.5e-35 Score=275.23 Aligned_cols=292 Identities=22% Similarity=0.320 Sum_probs=214.3
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHH
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQ 99 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (423)
+++||+|||||++|+++|..|++.|++|+++|+. .+||.|..... ...++. ++.......+.+
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~----------~~~~~~------~~~~~~~~~~~~ 66 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGM-EKGGQLTTTTE----------VENWPG------DPNDLTGPLLME 66 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS-STTGGGGGCSB----------CCCSTT------CCSSCBHHHHHH
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC-CCCceEecchh----------hhhCCC------CCCCCCHHHHHH
Confidence 4679999999999999999999999999999975 66776543210 001111 122246778889
Q ss_pred HHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCCCCCCceeee
Q 014522 100 YLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDIEGLADFGGEVIH 179 (423)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~~~~~~~~~~ 179 (423)
++.+.+.+++++++.++ |+.++... +.|.+ +.+ + ..+.||+||+||| +.|..|.+||...+.+..++
T Consensus 67 ~~~~~~~~~~~~~~~~~-v~~i~~~~--~~~~v-~~~------~-~~~~~~~lv~AtG--~~~~~~~~~g~~~~~~~~~~ 133 (320)
T 1trb_A 67 RMHEHATKFETEIIFDH-INKVDLQN--RPFRL-NGD------N-GEYTCDALIIATG--ASARYLGLPSEEAFKGRGVS 133 (320)
T ss_dssp HHHHHHHHTTCEEECCC-EEEEECSS--SSEEE-EES------S-CEEEEEEEEECCC--EEECCCCCHHHHHTBTTTEE
T ss_pred HHHHHHHHCCCEEEEee-eeEEEecC--CEEEE-EeC------C-CEEEcCEEEECCC--CCcCCCCCCChHHhCCceeE
Confidence 99999999999988776 88887655 67766 433 3 5799999999999 67777888876554333344
Q ss_pred cCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHhhccHHHHHHHHHH
Q 014522 180 ACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPLWLVDKILLI 259 (423)
Q Consensus 180 ~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (423)
.+...+.....+++++|||+|.+|+|+|..|++.|.+|+++.|++. +.+..
T Consensus 134 ~~~~~~~~~~~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~-~~~~~---------------------------- 184 (320)
T 1trb_A 134 ACATSDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDG-FRAEK---------------------------- 184 (320)
T ss_dssp SCHHHHGGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS-CCCCH----------------------------
T ss_pred ecccCCccccCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCc-cccCH----------------------------
Confidence 3333233335678999999999999999999999999999999873 21100
Q ss_pred HHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeCCe-----EEEcc----C--c
Q 014522 260 LAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISCGQ-----AELIN----G--E 326 (423)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~~-----v~~~~----g--~ 326 (423)
.+...+.+.+++.+|+++.+ +.++..++ +.+.+ | +
T Consensus 185 --------------------------------~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~ 232 (320)
T 1trb_A 185 --------------------------------ILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIE 232 (320)
T ss_dssp --------------------------------HHHHHHHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCE
T ss_pred --------------------------------HHHHHHHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceE
Confidence 01111234455678999876 77776543 77765 4 4
Q ss_pred EecccEEEEcCCCCCCCCCccccccc-ccCCCCCCCCCCC----CCCCCCceEEEeeccccC----CCcchhHHHHHHHH
Q 014522 327 KLDIDAIVLATGYRSNVPSWLQESEF-FSENGFPKAPFPH----GWKGNAGLYAVGFTRRGL----SGASSDAMRIAQDI 397 (423)
Q Consensus 327 ~~~~D~vi~a~G~~~~~~~ll~~~~~-~~~~g~~~~~~~~----~~~~~~~vya~Gd~~~~~----~~a~~~g~~~a~~i 397 (423)
++++|.||+|+|++|++ .+++ .++ .+ +|++.++..+ ++|+.|+|||+|||+... ..|+.+|+.+|.+|
T Consensus 233 ~i~~D~vv~a~G~~p~~-~~~~-~~l~~~-~G~i~vd~~~~~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i 309 (320)
T 1trb_A 233 SLDVAGLFVAIGHSPNT-AIFE-GQLELE-NGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDA 309 (320)
T ss_dssp EEECSEEEECSCEEESC-GGGT-TTSCEE-TTEECCCCSSSSCTTBCSSTTEEECGGGGCSSSCCHHHHHHHHHHHHHHH
T ss_pred EEEcCEEEEEeCCCCCh-HHhc-cccccc-CceEEECCCcccccccCCCCCEEEcccccCCcchhhhhhhccHHHHHHHH
Confidence 79999999999999997 5665 345 45 8999998432 478999999999998753 26899999999999
Q ss_pred hhhhHHHH
Q 014522 398 GKVWKEET 405 (423)
Q Consensus 398 ~~~l~~~~ 405 (423)
...|.+..
T Consensus 310 ~~~l~~~~ 317 (320)
T 1trb_A 310 ERYLDGLA 317 (320)
T ss_dssp HHHHTC--
T ss_pred HHHHHhcc
Confidence 99987543
No 26
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=100.00 E-value=1.4e-33 Score=280.73 Aligned_cols=290 Identities=18% Similarity=0.240 Sum_probs=222.7
Q ss_pred cccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHH
Q 014522 19 IWVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFI 98 (423)
Q Consensus 19 ~~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (423)
...+||+|||||++|+++|..|++.|++++++|+ ..||.|..... ...+.. ..+.....+.
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--~~GG~~~~~~~----------~~~~~~-------~~~~~~~~l~ 270 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--RFGGQVLDTVD----------IENYIS-------VPKTEGQKLA 270 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTGGGTTCSC----------BCCBTT-------BSSBCHHHHH
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--CCCCccccccc----------ccccCC-------CCCCCHHHHH
Confidence 3478999999999999999999999999999986 46777753210 000000 0124677888
Q ss_pred HHHHHHHHHcCCceeccceEEEEEEeCC-CCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCCCCCCcee
Q 014522 99 QYLESYAEKFEINPRFNECVQSARYDET-SGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDIEGLADFGGEV 177 (423)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~v~~v~~~~~-~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~~~~~~~~ 177 (423)
+++.+.+.+++++++.+++|+.++.... .+.|.|++.+ + ..++||+||+||| +.+..|.+||...+.+..
T Consensus 271 ~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~------g-~~~~~d~vVlAtG--~~~~~~~ipG~~~~~~~~ 341 (521)
T 1hyu_A 271 GALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETAS------G-AVLKARSIIIATG--AKWRNMNVPGEDQYRTKG 341 (521)
T ss_dssp HHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETT------S-CEEEEEEEEECCC--EEECCCCCTTTTTTTTTT
T ss_pred HHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECC------C-CEEEcCEEEECCC--CCcCCCCCCChhhhcCce
Confidence 9999999999999999999999986432 2468888865 4 5899999999999 667778889887765544
Q ss_pred eecCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHhhccHHHHHHHH
Q 014522 178 IHACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPLWLVDKIL 257 (423)
Q Consensus 178 ~~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (423)
++.+.......+.+++++|||+|.+|+|+|..|++.|.+|+++.|.+. +.+.
T Consensus 342 v~~~~~~~~~~~~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~-l~~~--------------------------- 393 (521)
T 1hyu_A 342 VTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE-MKAD--------------------------- 393 (521)
T ss_dssp EECCTTCCGGGGBTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSS-CCSC---------------------------
T ss_pred EEEeecCchhhcCCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcc-cCcC---------------------------
Confidence 555555544556789999999999999999999999999999999883 2110
Q ss_pred HHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhc-CCeEEecC--ceEEeCC-----eEEEcc---Cc
Q 014522 258 LILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRS-GHINVVPG--IKRISCG-----QAELIN---GE 326 (423)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~--i~~~~~~-----~v~~~~---g~ 326 (423)
..+.+.+.+ .+|+++.+ +.++..+ ++.+.+ |+
T Consensus 394 -------------------------------------~~l~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~ 436 (521)
T 1hyu_A 394 -------------------------------------QVLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGD 436 (521)
T ss_dssp -------------------------------------HHHHHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCC
T ss_pred -------------------------------------HHHHHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCc
Confidence 012223334 58998887 7777653 356654 54
Q ss_pred --EecccEEEEcCCCCCCCCCccccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccC----CCcchhHHHHHHHHhh
Q 014522 327 --KLDIDAIVLATGYRSNVPSWLQESEF-FSENGFPKAPFPHGWKGNAGLYAVGFTRRGL----SGASSDAMRIAQDIGK 399 (423)
Q Consensus 327 --~~~~D~vi~a~G~~~~~~~ll~~~~~-~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~----~~a~~~g~~~a~~i~~ 399 (423)
++++|.|++|+|++|++ .+++.. + .+++|++.+| .+++|+.|+|||+|||+... ..|+.+|+.+|.+|..
T Consensus 437 ~~~i~~D~vi~a~G~~pn~-~~l~~~-l~~~~~G~I~Vd-~~~~ts~p~VfA~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 513 (521)
T 1hyu_A 437 IHSVALAGIFVQIGLLPNT-HWLEGA-LERNRMGEIIID-AKCETSVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAFD 513 (521)
T ss_dssp EEEEECSEEEECCCEEESC-GGGTTT-SCBCTTSCBCCC-TTCBCSSTTEEECSTTBCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEcCEEEECcCCCCCc-hHHhhh-hccCCCCcEEeC-CCCCCCCCCEEEeecccCCCcceeeehHHhHHHHHHHHHH
Confidence 68999999999999998 676653 5 4668999999 57889999999999999753 2689999999999999
Q ss_pred hhHHH
Q 014522 400 VWKEE 404 (423)
Q Consensus 400 ~l~~~ 404 (423)
.|.+.
T Consensus 514 ~L~~~ 518 (521)
T 1hyu_A 514 YLIRT 518 (521)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 88764
No 27
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=7.4e-35 Score=283.76 Aligned_cols=290 Identities=19% Similarity=0.213 Sum_probs=206.5
Q ss_pred CCeEEECCChHHHHHHHHHHHcC--CCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCC-CCHHHHH
Q 014522 22 NGPVIVGAGPSGLATAACLRDQG--VPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEY-PTKRQFI 98 (423)
Q Consensus 22 ~~vvIIGaG~aGl~~A~~L~~~g--~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 98 (423)
++|+|||||+||++||..|+++| .+|+|||+++..+... ..+ +... .... .+....+ ...
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~-------~~l--~~~~---~~~~-~~~~~~~~~~~---- 63 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFAN-------CAL--PYVI---GEVV-EDRRYALAYTP---- 63 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCG-------GGH--HHHH---TTSS-CCGGGTBCCCH----
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCc-------chh--HHHH---cCCc-cchhhhhhcCH----
Confidence 47999999999999999999998 5899999987543210 000 0000 0000 0000000 111
Q ss_pred HHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCCCCCCceee
Q 014522 99 QYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDIEGLADFGGEVI 178 (423)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~~~~~~~~~ 178 (423)
..+.++.+++++.+++|+.++... ....+..... ++...+.||+|||||| +.|..|.++|...+..+..
T Consensus 64 ---~~~~~~~~i~~~~~~~V~~id~~~--~~~~~~~~~~----~~~~~~~yd~lVIATG--s~p~~p~i~g~~~~~~~~~ 132 (437)
T 4eqs_A 64 ---EKFYDRKQITVKTYHEVIAINDER--QTVSVLNRKT----NEQFEESYDKLILSPG--ASANSLGFESDITFTLRNL 132 (437)
T ss_dssp ---HHHHHHHCCEEEETEEEEEEETTT--TEEEEEETTT----TEEEEEECSEEEECCC--EEECCCCCCCTTEECCSSH
T ss_pred ---HHHHHhcCCEEEeCCeEEEEEccC--cEEEEEeccC----CceEEEEcCEEEECCC--CccccccccCceEEeeccH
Confidence 233456699999999999998655 5533333321 1336799999999999 7888888877433211111
Q ss_pred ecCCCCCC--CCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHhhccHHHHHHH
Q 014522 179 HACDYKSG--EKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPLWLVDKI 256 (423)
Q Consensus 179 ~~~~~~~~--~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (423)
..+..+.. ....+++++|||+|.+|+|+|..+++.|.+|+++.|.+ .+++..+.
T Consensus 133 ~~~~~l~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~ll~~~d~----------------------- 188 (437)
T 4eqs_A 133 EDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSD-KINKLMDA----------------------- 188 (437)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSS-CCSTTSCG-----------------------
T ss_pred HHHHHHHHhhhccCCcEEEEECCccchhhhHHHHHhcCCcceeeeeec-cccccccc-----------------------
Confidence 11100000 11246899999999999999999999999999999998 45454432
Q ss_pred HHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeCCeEEEccCcEecccEEE
Q 014522 257 LLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISCGQAELINGEKLDIDAIV 334 (423)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~~v~~~~g~~~~~D~vi 334 (423)
.....+.+.+++.+|+++.+ +.+++...+++++|+++++|.||
T Consensus 189 -----------------------------------~~~~~~~~~l~~~gV~i~~~~~v~~~~~~~v~~~~g~~~~~D~vl 233 (437)
T 4eqs_A 189 -----------------------------------DMNQPILDELDKREIPYRLNEEINAINGNEITFKSGKVEHYDMII 233 (437)
T ss_dssp -----------------------------------GGGHHHHHHHHHTTCCEEESCCEEEEETTEEEETTSCEEECSEEE
T ss_pred -----------------------------------hhHHHHHHHhhccceEEEeccEEEEecCCeeeecCCeEEeeeeEE
Confidence 23333455667788998877 88999899999999999999999
Q ss_pred EcCCCCCCCCCccccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccC-------------CCcchhHHHHHHHHhhh
Q 014522 335 LATGYRSNVPSWLQESEF-FSENGFPKAPFPHGWKGNAGLYAVGFTRRGL-------------SGASSDAMRIAQDIGKV 400 (423)
Q Consensus 335 ~a~G~~~~~~~ll~~~~~-~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~-------------~~a~~~g~~~a~~i~~~ 400 (423)
+|+|++||+ .+++..++ .+++|++.+| ++++|+.|+|||+|||+... ..|.+||+++|+||.+.
T Consensus 234 ~a~G~~Pn~-~~~~~~gl~~~~~G~I~vd-~~~~Ts~p~IyA~GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a~ni~g~ 311 (437)
T 4eqs_A 234 EGVGTHPNS-KFIESSNIKLDRKGFIPVN-DKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIAGN 311 (437)
T ss_dssp ECCCEEESC-GGGTTSSCCCCTTSCEECC-TTCBCSSTTEEECGGGEEEEBSSSSSEECCCSHHHHHHHHHHHHHHHHSC
T ss_pred EEeceecCc-HHHHhhhhhhccCCcEecC-CCccCCCCCEEEEEEccCcccccCCccccchhHHHHHHHHHHHHHHHcCC
Confidence 999999998 78888888 5778999999 68899999999999997531 14788999999999864
No 28
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=9.4e-34 Score=277.81 Aligned_cols=284 Identities=15% Similarity=0.135 Sum_probs=201.6
Q ss_pred CCeEEECCChHHHHHHHHHHHc--CCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHH
Q 014522 22 NGPVIVGAGPSGLATAACLRDQ--GVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQ 99 (423)
Q Consensus 22 ~~vvIIGaG~aGl~~A~~L~~~--g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (423)
+||+|||||++|+++|..|+++ |.+|+|||+.+.+|..... +..... ........+..
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~-----~~~~~~---------------~~~~~~~~~~~ 62 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGG-----LSAYFN---------------HTINELHEARY 62 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC------------------------------------CC
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCcc-----chhhhc---------------CCCCCHHHhhc
Confidence 6899999999999999999999 8999999999876511100 000000 00001111111
Q ss_pred HHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCCCCCCceeee
Q 014522 100 YLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDIEGLADFGGEVIH 179 (423)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~~~~~~~~~~ 179 (423)
...+.+.+++++++.+++|++++... +.+.+.... +...+.||+||+||| +.|..|.+||.+.. .+++
T Consensus 63 ~~~~~~~~~gi~~~~~~~V~~id~~~--~~v~v~~~~------~~~~~~~d~lviAtG--~~p~~p~i~g~~~~--~v~~ 130 (452)
T 3oc4_A 63 ITEEELRRQKIQLLLNREVVAMDVEN--QLIAWTRKE------EQQWYSYDKLILATG--ASQFSTQIRGSQTE--KLLK 130 (452)
T ss_dssp CCHHHHHHTTEEEECSCEEEEEETTT--TEEEEEETT------EEEEEECSEEEECCC--CCBCCCCCBTTTCT--TEEE
T ss_pred CCHHHHHHCCCEEEECCEEEEEECCC--CEEEEEecC------ceEEEEcCEEEECCC--cccCCCCCCCCCCC--CEEE
Confidence 12334456788888999999998765 676555222 337899999999999 78988889987642 2233
Q ss_pred cCCCCC-----CCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecc-cccCCChHHHHHHHHhhccHHHH
Q 014522 180 ACDYKS-----GEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPR-EILGKSTFELATLMMKWLPLWLV 253 (423)
Q Consensus 180 ~~~~~~-----~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 253 (423)
.....+ .....+++++|||+|.+|+|+|..|++.|.+|+++.|.+ .+++. .+
T Consensus 131 ~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~d--------------------- 188 (452)
T 3oc4_A 131 YKFLSGALAAVPLLENSQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLE-NLLPKYFD--------------------- 188 (452)
T ss_dssp GGGCC----CCHHHHTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSSTTTCC---------------------
T ss_pred eCCHHHHHHHHHHHhcCCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccC-ccccccCC---------------------
Confidence 222111 122357899999999999999999999999999999998 44443 22
Q ss_pred HHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEe--CCe--EEEccCcE
Q 014522 254 DKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRIS--CGQ--AELINGEK 327 (423)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~--~~~--v~~~~g~~ 327 (423)
+.....+.+.+++.+|+++.+ +.++. .++ +.++++ +
T Consensus 189 -------------------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~ 230 (452)
T 3oc4_A 189 -------------------------------------KEMVAEVQKSLEKQAVIFHFEETVLGIEETANGIVLETSEQ-E 230 (452)
T ss_dssp -------------------------------------HHHHHHHHHHHHTTTEEEEETCCEEEEEECSSCEEEEESSC-E
T ss_pred -------------------------------------HHHHHHHHHHHHHcCCEEEeCCEEEEEEccCCeEEEEECCC-E
Confidence 112222455566789999876 77777 233 555566 8
Q ss_pred ecccEEEEcCCCCCCCCCccccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccC-------------CCcchhHHHH
Q 014522 328 LDIDAIVLATGYRSNVPSWLQESEF-FSENGFPKAPFPHGWKGNAGLYAVGFTRRGL-------------SGASSDAMRI 393 (423)
Q Consensus 328 ~~~D~vi~a~G~~~~~~~ll~~~~~-~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~-------------~~a~~~g~~~ 393 (423)
+++|.||+|+|++|++ .+++.. + .+++|++.+| .+++|+.|+|||+|||+... ..|..||+.+
T Consensus 231 i~aD~Vv~A~G~~p~~-~~l~~~-~~~~~~g~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~a 307 (452)
T 3oc4_A 231 ISCDSGIFALNLHPQL-AYLDKK-IQRNLDQTIAVD-AYLQTSVPNVFAIGDCISVMNEPVAETFYAPLVNNAVRTGLVV 307 (452)
T ss_dssp EEESEEEECSCCBCCC-SSCCTT-SCBCTTSCBCCC-TTCBCSSTTEEECGGGBCEEEGGGTEEECCCCHHHHHHHHHHH
T ss_pred EEeCEEEECcCCCCCh-HHHHhh-hccCCCCCEEEC-cCccCCCCCEEEEEeeEEeccccCCceeecchHHHHHHHHHHH
Confidence 9999999999999998 566554 5 5678999999 58899999999999998642 1589999999
Q ss_pred HHHHhhh
Q 014522 394 AQDIGKV 400 (423)
Q Consensus 394 a~~i~~~ 400 (423)
|.+|.+.
T Consensus 308 a~~i~g~ 314 (452)
T 3oc4_A 308 ANNLEEK 314 (452)
T ss_dssp TTSSSSC
T ss_pred HHHhcCC
Confidence 9999864
No 29
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=1.5e-35 Score=283.62 Aligned_cols=273 Identities=17% Similarity=0.197 Sum_probs=197.0
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHH
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQ 99 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (423)
...+|+|||||+||++||..|.+.+.+|+|||+++..+. ....+ +..+ .. .....++..
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y-------~~~~l--~~~l---~g---------~~~~~~l~~ 66 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPY-------YRPRL--NEII---AK---------NKSIDDILI 66 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCB-------CGGGH--HHHH---HS---------CCCGGGTBS
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCc-------ccChh--hHHH---cC---------CCCHHHccC
Confidence 356899999999999999999777899999999876541 11110 0000 00 011112222
Q ss_pred HHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCCCCCCceeee
Q 014522 100 YLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDIEGLADFGGEVIH 179 (423)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~~~~~~~~~~ 179 (423)
+..+.+++++++++++++|++++... .. |++.+ + +++.||+||+||| +.|+.|.+||.+ .+++
T Consensus 67 ~~~~~~~~~~i~~~~~~~V~~id~~~--~~--v~~~~------g-~~~~yd~lvlAtG--~~p~~p~i~G~~----~v~~ 129 (385)
T 3klj_A 67 KKNDWYEKNNIKVITSEFATSIDPNN--KL--VTLKS------G-EKIKYEKLIIASG--SIANKIKVPHAD----EIFS 129 (385)
T ss_dssp SCHHHHHHTTCEEECSCCEEEEETTT--TE--EEETT------S-CEEECSEEEECCC--EEECCCCCTTCS----CEEC
T ss_pred CCHHHHHHCCCEEEeCCEEEEEECCC--CE--EEECC------C-CEEECCEEEEecC--CCcCCCCCCCCC----CeEE
Confidence 23344556799999999999998755 54 77765 4 5899999999999 788888899876 2222
Q ss_pred cCCCCCCC-----CCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHhhccHHHHH
Q 014522 180 ACDYKSGE-----KYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPLWLVD 254 (423)
Q Consensus 180 ~~~~~~~~-----~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (423)
.....+.. ...+++++|||+|.+|+|+|..|++.|.+|+++.+.+ .++++..
T Consensus 130 ~~~~~d~~~l~~~l~~~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~-~~l~~~~---------------------- 186 (385)
T 3klj_A 130 LYSYDDALKIKDECKNKGKAFIIGGGILGIELAQAIIDSGTPASIGIILE-YPLERQL---------------------- 186 (385)
T ss_dssp CSSHHHHHHHHHHHHHHSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSS-SSCTTTS----------------------
T ss_pred eCCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCC-ccchhhc----------------------
Confidence 22211111 1126899999999999999999999999999999998 4444321
Q ss_pred HHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeCCeEEEccCcEecccE
Q 014522 255 KILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISCGQAELINGEKLDIDA 332 (423)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~~v~~~~g~~~~~D~ 332 (423)
.+.....+.+.+++.+|+++.+ +.++ |+++++|.
T Consensus 187 -----------------------------------~~~~~~~~~~~l~~~gV~~~~~~~v~~i---------g~~~~~D~ 222 (385)
T 3klj_A 187 -----------------------------------DRDGGLFLKDKLDRLGIKIYTNSNFEEM---------GDLIRSSC 222 (385)
T ss_dssp -----------------------------------CHHHHHHHHHHHHTTTCEEECSCCGGGC---------HHHHHHSE
T ss_pred -----------------------------------CHHHHHHHHHHHHhCCCEEEeCCEEEEc---------CeEEecCe
Confidence 1111122344566778888876 4444 67899999
Q ss_pred EEEcCCCCCCCCCcccccccccCCCCCCCCCCCCCCCCCceEEEeecccc----C---CCcchhHHHHHHHHhhh
Q 014522 333 IVLATGYRSNVPSWLQESEFFSENGFPKAPFPHGWKGNAGLYAVGFTRRG----L---SGASSDAMRIAQDIGKV 400 (423)
Q Consensus 333 vi~a~G~~~~~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~----~---~~a~~~g~~~a~~i~~~ 400 (423)
||+|+|++|++ .+++.+++..++| +.+| .+++|+.|+|||+|||+.. . ..|..||+.+|.+|.+.
T Consensus 223 vv~a~G~~p~~-~~~~~~gl~~~~g-i~vd-~~~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g~ 294 (385)
T 3klj_A 223 VITAVGVKPNL-DFIKDTEIASKRG-ILVN-DHMETSIKDIYACGDVAEFYGKNPGLINIANKQGEVAGLNACGE 294 (385)
T ss_dssp EEECCCEEECC-GGGTTSCCCBSSS-EEEC-TTCBCSSTTEEECGGGEEETTBCCCCHHHHHHHHHHHHHHHTTC
T ss_pred EEECcCcccCh-hhhhhcCCCcCCC-EEEC-CCcccCCCCEEEEEeeEecCCCcccHHHHHHHHHHHHHHHhcCC
Confidence 99999999998 7888888866667 6677 5888999999999999862 1 26899999999999874
No 30
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=4.2e-34 Score=283.22 Aligned_cols=307 Identities=17% Similarity=0.176 Sum_probs=202.9
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCccccccc-CCceeecCC----------CccccCCCCCCCCCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRT-YDRLNLHLP----------KQFCQLPKLQFPEDF 88 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~-~~~~~~~~~----------~~~~~~~~~~~~~~~ 88 (423)
+.+||+|||||++|+++|..|++.|++|+|||+.+.+||+|.... .+...+..+ ...+.+.......++
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 103 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANPKLNL 103 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCCEECH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCCccCH
Confidence 568999999999999999999999999999999999999875421 111100000 000000000000000
Q ss_pred CCCC-CH----HHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCc
Q 014522 89 PEYP-TK----RQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERV 163 (423)
Q Consensus 89 ~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~ 163 (423)
..+. .. ..+...+....++.+++++.+..+. . +...+.|.+.+ +....+.||+||+||| +.|
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~---~--~~~~~~v~~~~-----g~~~~~~~d~lViATG--s~p- 170 (491)
T 3urh_A 104 QKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKV---L--GQGKVSVTNEK-----GEEQVLEAKNVVIATG--SDV- 170 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEE---C--SSSEEEEECTT-----SCEEEEECSEEEECCC--EEC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE---e--cCCEEEEEeCC-----CceEEEEeCEEEEccC--CCC-
Confidence 0000 01 1122223444556677765554321 1 22565565443 1336899999999999 554
Q ss_pred CCCCCCCCC-CCceeeecCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHH
Q 014522 164 MPDIEGLAD-FGGEVIHACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELAT 242 (423)
Q Consensus 164 ~p~~~g~~~-~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~ 242 (423)
+.+||+.. +.+..++++.........+++++|||+|.+|+|+|..|++.|.+|+++.+.+ .+++..+.
T Consensus 171 -~~ipg~~~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~--------- 239 (491)
T 3urh_A 171 -AGIPGVEVAFDEKTIVSSTGALALEKVPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLD-TILGGMDG--------- 239 (491)
T ss_dssp -CCBTTBCCCCCSSSEECHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS-SSSSSSCH---------
T ss_pred -CCCCCcccccCCeeEEehhHhhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccc-cccccCCH---------
Confidence 35677652 2233344444333344568999999999999999999999999999999988 44443321
Q ss_pred HHHhhccHHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeCC--
Q 014522 243 LMMKWLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISCG-- 318 (423)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~-- 318 (423)
.....+.+.+++.+|+++.+ +.++..+
T Consensus 240 -------------------------------------------------~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~ 270 (491)
T 3urh_A 240 -------------------------------------------------EVAKQLQRMLTKQGIDFKLGAKVTGAVKSGD 270 (491)
T ss_dssp -------------------------------------------------HHHHHHHHHHHHTTCEEECSEEEEEEEEETT
T ss_pred -------------------------------------------------HHHHHHHHHHHhCCCEEEECCeEEEEEEeCC
Confidence 11222344566778998877 6666542
Q ss_pred e--EEEcc---C--cEecccEEEEcCCCCCCCCCc-cccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccCC---Cc
Q 014522 319 Q--AELIN---G--EKLDIDAIVLATGYRSNVPSW-LQESEF-FSENGFPKAPFPHGWKGNAGLYAVGFTRRGLS---GA 386 (423)
Q Consensus 319 ~--v~~~~---g--~~~~~D~vi~a~G~~~~~~~l-l~~~~~-~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~---~a 386 (423)
+ +.+.+ | +++++|.||+|+|++|+...+ ++..++ .+++|++.+| .+++|+.|+|||+|||++.+. .|
T Consensus 271 ~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~A 349 (491)
T 3urh_A 271 GAKVTFEPVKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEID-RHFQTSIAGVYAIGDVVRGPMLAHKA 349 (491)
T ss_dssp EEEEEEEETTSCCCEEEEESEEEECCCCEECCTTSCHHHHTCCBCTTSCBCCC-TTCBCSSTTEEECGGGSSSCCCHHHH
T ss_pred EEEEEEEecCCCceEEEEcCEEEEeeCCccCCCccCchhcCceECCCCCEeEC-CCCCCCCCCEEEEEecCCCccchhHH
Confidence 2 45543 5 589999999999999998444 667777 5668999999 578899999999999996544 68
Q ss_pred chhHHHHHHHHhhh
Q 014522 387 SSDAMRIAQDIGKV 400 (423)
Q Consensus 387 ~~~g~~~a~~i~~~ 400 (423)
..||+.+|.+|.+.
T Consensus 350 ~~~g~~aa~~i~g~ 363 (491)
T 3urh_A 350 EDEGVAVAEIIAGQ 363 (491)
T ss_dssp HHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHcCC
Confidence 99999999999874
No 31
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=100.00 E-value=1.6e-33 Score=280.72 Aligned_cols=302 Identities=16% Similarity=0.181 Sum_probs=212.6
Q ss_pred cccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccC-Cceeec-CCC---ccccCCCCC-CCCCCCCCC
Q 014522 19 IWVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTY-DRLNLH-LPK---QFCQLPKLQ-FPEDFPEYP 92 (423)
Q Consensus 19 ~~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~-~~~~~~-~~~---~~~~~~~~~-~~~~~~~~~ 92 (423)
+.++||+|||||++|+++|..|++.|.+|+|||+.+.+||.|....+ +...+. ... .......+. ++.....++
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 120 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTEKVV 120 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCTTCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHHhhhh
Confidence 45789999999999999999999999999999999878988754211 100000 000 000001111 122222233
Q ss_pred CHHHHHHHHH-------HHH-----HHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCC
Q 014522 93 TKRQFIQYLE-------SYA-----EKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENA 160 (423)
Q Consensus 93 ~~~~~~~~~~-------~~~-----~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~ 160 (423)
+...+.+++. ... ++.+++++++.++..++. .. |.+.. ..+.||+||+||| +
T Consensus 121 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~----~~--v~~~g--------~~~~~d~lViATG--s 184 (523)
T 1mo9_A 121 GIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDN----HT--VEAAG--------KVFKAKNLILAVG--A 184 (523)
T ss_dssp CHHHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEET----TE--EEETT--------EEEEBSCEEECCC--E
T ss_pred hHHHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeC----CE--EEECC--------EEEEeCEEEECCC--C
Confidence 4667766654 344 667888775677877652 33 55542 5799999999999 7
Q ss_pred CCcCCCCCCCCCCCceeeecCCCC-CCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHH
Q 014522 161 ERVMPDIEGLADFGGEVIHACDYK-SGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFE 239 (423)
Q Consensus 161 ~~~~p~~~g~~~~~~~~~~~~~~~-~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~ 239 (423)
.|..|.++|.... .+++..+.. ......+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ .+++..+.
T Consensus 185 ~p~~p~i~G~~~~--~v~~~~~~~~~l~~~~g~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~-~~l~~~~~------ 255 (523)
T 1mo9_A 185 GPGTLDVPGVNAK--GVFDHATLVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTE-PLKLIKDN------ 255 (523)
T ss_dssp ECCCCCSTTTTSB--TEEEHHHHHHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC-TTTTCCSH------
T ss_pred CCCCCCCCCcccC--cEeeHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEecC-cccccccH------
Confidence 8888888887542 133333222 2122233899999999999999999999999999999998 44443221
Q ss_pred HHHHHHhhccHHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeC
Q 014522 240 LATLMMKWLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISC 317 (423)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~ 317 (423)
.+...+.+.+++.+|+++.+ +.++..
T Consensus 256 ----------------------------------------------------~~~~~l~~~l~~~GV~i~~~~~V~~i~~ 283 (523)
T 1mo9_A 256 ----------------------------------------------------ETRAYVLDRMKEQGMEIISGSNVTRIEE 283 (523)
T ss_dssp ----------------------------------------------------HHHHHHHHHHHHTTCEEESSCEEEEEEE
T ss_pred ----------------------------------------------------HHHHHHHHHHHhCCcEEEECCEEEEEEE
Confidence 11122344456678998877 777764
Q ss_pred --Ce------EEEccCc-EecccEEEEcCCCCCCCCC-ccccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccCC--
Q 014522 318 --GQ------AELINGE-KLDIDAIVLATGYRSNVPS-WLQESEF-FSENGFPKAPFPHGWKGNAGLYAVGFTRRGLS-- 384 (423)
Q Consensus 318 --~~------v~~~~g~-~~~~D~vi~a~G~~~~~~~-ll~~~~~-~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~-- 384 (423)
++ +.+.+|+ ++++|.||+|+|++|++ . +++.+++ .+++|++.+| ++++|+.|+|||+|||++...
T Consensus 284 ~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~-~~~l~~~gl~~~~~G~i~Vd-~~~~t~~~~IyA~GD~~~~~~~~ 361 (523)
T 1mo9_A 284 DANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRS-AELAKILGLDLGPKGEVLVN-EYLQTSVPNVYAVGDLIGGPMEM 361 (523)
T ss_dssp CTTSBEEEEEEEETTEEEEEECSCEEECCCCEECC-HHHHHHHTCCBCTTSCBCCC-TTSBCSSTTEEECGGGGCSSCSH
T ss_pred cCCCceEEEEEEECCCcEEEEcCEEEECcCCccCC-ccCHHHcCCccCCCCCEEEC-CCCccCCCCEEEEeecCCCcccH
Confidence 33 5667887 89999999999999997 5 6777787 4568999998 578899999999999998543
Q ss_pred -CcchhHHHHHHHHhh
Q 014522 385 -GASSDAMRIAQDIGK 399 (423)
Q Consensus 385 -~a~~~g~~~a~~i~~ 399 (423)
.|..||+++|.+|.+
T Consensus 362 ~~A~~~g~~aa~~i~g 377 (523)
T 1mo9_A 362 FKARKSGCYAARNVMG 377 (523)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcC
Confidence 689999999999986
No 32
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=1.7e-34 Score=280.10 Aligned_cols=288 Identities=20% Similarity=0.198 Sum_probs=202.9
Q ss_pred cccCCeEEECCChHHHHHHHHHHHcCCC--EEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHH
Q 014522 19 IWVNGPVIVGAGPSGLATAACLRDQGVP--FVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQ 96 (423)
Q Consensus 19 ~~~~~vvIIGaG~aGl~~A~~L~~~g~~--v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (423)
++++||+|||||++|+++|..|+++|.+ |+|+|+.+..+.. ...+. ..+ + ........
T Consensus 7 ~~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~-------~~~l~--~~~--~---------~~~~~~~~ 66 (415)
T 3lxd_A 7 AERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYE-------RPPLS--KEY--L---------AREKTFER 66 (415)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBC-------SGGGG--TTT--T---------TTSSCSGG
T ss_pred CCCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcC-------cccCC--HHH--H---------cCCCCHHH
Confidence 3567999999999999999999999986 9999998754311 10000 000 0 00001111
Q ss_pred HHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCCCCCCce
Q 014522 97 FIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDIEGLADFGGE 176 (423)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~~~~~~~ 176 (423)
+..+......+.+++++.+++|+.++... .. |.+.+ + ..+.||+||+||| +.|..|.+||.+.....
T Consensus 67 ~~~~~~~~~~~~~i~~~~~~~v~~id~~~--~~--v~~~~------g-~~~~~d~lvlAtG--~~~~~~~i~g~~~~~v~ 133 (415)
T 3lxd_A 67 ICIRPAQFWEDKAVEMKLGAEVVSLDPAA--HT--VKLGD------G-SAIEYGKLIWATG--GDPRRLSCVGADLAGVH 133 (415)
T ss_dssp GBSSCHHHHHHTTEEEEETCCEEEEETTT--TE--EEETT------S-CEEEEEEEEECCC--EECCCCBTTSSCCBTEE
T ss_pred hccCCHHHHHHCCcEEEeCCEEEEEECCC--CE--EEECC------C-CEEEeeEEEEccC--CccCCCCCCCccccCEE
Confidence 11122344456789999999999987654 43 77765 4 5899999999999 78888888886532111
Q ss_pred eeecCCCC---CCCCCC-CCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHhhccHHH
Q 014522 177 VIHACDYK---SGEKYK-GKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPLWL 252 (423)
Q Consensus 177 ~~~~~~~~---~~~~~~-~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (423)
.+.+.+.. ...... +++++|||+|.+|+|+|..|++.|.+|+++.+.+ .+++...
T Consensus 134 ~~~~~~d~~~l~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~-~~l~~~~-------------------- 192 (415)
T 3lxd_A 134 AVRTKEDADRLMAELDAGAKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALP-RVLARVA-------------------- 192 (415)
T ss_dssp CCCSHHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-STTTTTS--------------------
T ss_pred EEcCHHHHHHHHHHhhhcCCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCC-chhhhhc--------------------
Confidence 11111100 001122 7899999999999999999999999999999998 3333211
Q ss_pred HHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeCC-----eEEEccC
Q 014522 253 VDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISCG-----QAELING 325 (423)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~-----~v~~~~g 325 (423)
.+.....+.+.+++.+|+++.+ +.++..+ ++.+++|
T Consensus 193 -------------------------------------~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG 235 (415)
T 3lxd_A 193 -------------------------------------GEALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDG 235 (415)
T ss_dssp -------------------------------------CHHHHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSS
T ss_pred -------------------------------------CHHHHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCC
Confidence 1112222344566778999876 7777653 4788899
Q ss_pred cEecccEEEEcCCCCCCCCCcccccccccCCCCCCCCCCCCCCCCCceEEEeeccccC--------------CCcchhHH
Q 014522 326 EKLDIDAIVLATGYRSNVPSWLQESEFFSENGFPKAPFPHGWKGNAGLYAVGFTRRGL--------------SGASSDAM 391 (423)
Q Consensus 326 ~~~~~D~vi~a~G~~~~~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~--------------~~a~~~g~ 391 (423)
+++++|.||+|+|+.|++ .+++..++..++| +.+| .+++|+.|+|||+|||+... ..|..||+
T Consensus 236 ~~i~aD~Vv~a~G~~p~~-~l~~~~gl~~~~g-i~vd-~~~~t~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg~ 312 (415)
T 3lxd_A 236 SVIPADIVIVGIGIVPCV-GALISAGASGGNG-VDVD-EFCRTSLTDVYAIGDCAAHANDFADGAVIRLESVQNANDMAT 312 (415)
T ss_dssp CEEECSEEEECSCCEESC-HHHHHTTCCCSSS-EECC-TTCBCSSTTEEECGGGEEEECGGGTTCEECCCSHHHHHHHHH
T ss_pred CEEEcCEEEECCCCccCh-HHHHhCCCCcCCC-EEEC-CCCCcCCCCEEEEEeeeeecCcccCCcceeechHHHHHHHHH
Confidence 999999999999999997 6788888855567 6777 57889999999999998532 25889999
Q ss_pred HHHHHHhhh
Q 014522 392 RIAQDIGKV 400 (423)
Q Consensus 392 ~~a~~i~~~ 400 (423)
.+|.+|.+.
T Consensus 313 ~aa~~i~g~ 321 (415)
T 3lxd_A 313 AAAKDICGA 321 (415)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHhcCC
Confidence 999999875
No 33
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=100.00 E-value=5.4e-33 Score=274.16 Aligned_cols=307 Identities=14% Similarity=0.089 Sum_probs=207.0
Q ss_pred cccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccC-CceeecCC-----------CccccCCCCCCCC
Q 014522 19 IWVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTY-DRLNLHLP-----------KQFCQLPKLQFPE 86 (423)
Q Consensus 19 ~~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~-~~~~~~~~-----------~~~~~~~~~~~~~ 86 (423)
++++||+|||||++|+++|..|++.|.+|+|||+.+.+||+|....+ +...+... ...+.++......
T Consensus 4 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~~~~ 83 (474)
T 1zmd_A 4 PIDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVRL 83 (474)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESCEEE
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCCCcc
Confidence 35689999999999999999999999999999999889998754211 10000000 0000000000000
Q ss_pred CCCCCC-CHHH----HHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCC
Q 014522 87 DFPEYP-TKRQ----FIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAE 161 (423)
Q Consensus 87 ~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~ 161 (423)
++..+. .... +...+...+++.+++++.++.+ .+ +. ..+.|.+.+ ++..++.||+||+||| +.
T Consensus 84 ~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~-~~--~~--~~~~v~~~~-----gg~~~~~~d~lViAtG--s~ 151 (474)
T 1zmd_A 84 NLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGK-IT--GK--NQVTATKAD-----GGTQVIDTKNILIATG--SE 151 (474)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEE-EE--ET--TEEEEECTT-----SCEEEEEEEEEEECCC--EE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEE-Ee--cC--CEEEEEecC-----CCcEEEEeCEEEECCC--CC
Confidence 000000 1111 2222355566778888777643 33 23 566666543 1226799999999999 78
Q ss_pred CcCCCCCCCCCCCceeeecCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeec-ccccCCChHHH
Q 014522 162 RVMPDIEGLADFGGEVIHACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLP-REILGKSTFEL 240 (423)
Q Consensus 162 ~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~-~~~~~~~~~~~ 240 (423)
|..|.++|.+.. .++++.+... ....+++++|||+|.+|+|+|..|++.|.+|+++.+.+ .++| ..+. +
T Consensus 152 p~~p~i~g~~~~--~v~t~~~~~~-~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~-----~- 221 (474)
T 1zmd_A 152 VTPFPGITIDED--TIVSSTGALS-LKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLG-HVGGVGIDM-----E- 221 (474)
T ss_dssp ECCCTTCCCCSS--SEECHHHHTT-CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSCSSCCH-----H-
T ss_pred CCCCCCCCCCcC--cEEcHHHHhh-ccccCceEEEECCCHHHHHHHHHHHHcCCEEEEEeccC-ccCCcccCH-----H-
Confidence 888888886542 2344433332 22346899999999999999999999999999999998 4545 2221 1
Q ss_pred HHHHHhhccHHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeCC
Q 014522 241 ATLMMKWLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISCG 318 (423)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~ 318 (423)
....+.+.+++.+|+++.+ +.++..+
T Consensus 222 ----------------------------------------------------~~~~l~~~l~~~Gv~i~~~~~v~~i~~~ 249 (474)
T 1zmd_A 222 ----------------------------------------------------ISKNFQRILQKQGFKFKLNTKVTGATKK 249 (474)
T ss_dssp ----------------------------------------------------HHHHHHHHHHHTTCEEECSEEEEEEEEC
T ss_pred ----------------------------------------------------HHHHHHHHHHHCCCEEEeCceEEEEEEc
Confidence 1112344456678998877 7777643
Q ss_pred --e-EEE-------ccCcEecccEEEEcCCCCCCCCCc-cccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccCC--
Q 014522 319 --Q-AEL-------INGEKLDIDAIVLATGYRSNVPSW-LQESEF-FSENGFPKAPFPHGWKGNAGLYAVGFTRRGLS-- 384 (423)
Q Consensus 319 --~-v~~-------~~g~~~~~D~vi~a~G~~~~~~~l-l~~~~~-~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~-- 384 (423)
+ +.+ .+++++++|.||+|+|++|++..+ ++.+++ .+++|++.+| .+++|+.|+|||+|||+....
T Consensus 250 ~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~~~ 328 (474)
T 1zmd_A 250 SDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVN-TRFQTKIPNIYAIGDVVAGPMLA 328 (474)
T ss_dssp TTSCEEEEEEETTSCCCEEEEESEEEECSCEEECCTTSSHHHHTCCCCTTSCCCCC-TTCBCSSTTEEECGGGSSSCCCH
T ss_pred CCceEEEEEEecCCCCceEEEcCEEEECcCCCcCCCcCCchhcCCccCCCCCEEEC-cCCccCCCCEEEeeecCCCCccH
Confidence 2 433 356689999999999999998433 567777 4667999998 578899999999999997644
Q ss_pred -CcchhHHHHHHHHhhh
Q 014522 385 -GASSDAMRIAQDIGKV 400 (423)
Q Consensus 385 -~a~~~g~~~a~~i~~~ 400 (423)
.|..||+.+|.+|.+.
T Consensus 329 ~~A~~~g~~aa~~i~~~ 345 (474)
T 1zmd_A 329 HKAEDEGIICVEGMAGG 345 (474)
T ss_dssp HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhcCC
Confidence 6899999999999874
No 34
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=9.7e-34 Score=278.05 Aligned_cols=302 Identities=16% Similarity=0.213 Sum_probs=204.6
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccC-Cceee-cC--------CCccccCCCCCCCCCCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTY-DRLNL-HL--------PKQFCQLPKLQFPEDFP 89 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~-~~~~~-~~--------~~~~~~~~~~~~~~~~~ 89 (423)
+++||+|||||++|+++|..|++.|.+|+|||+. .+||.|..... +...+ .. ....+.+.......++.
T Consensus 2 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 80 (455)
T 1ebd_A 2 IETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTIDFA 80 (455)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEECHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccCHH
Confidence 4689999999999999999999999999999998 77887643211 00000 00 00000110000000000
Q ss_pred CCC-CH----HHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcC
Q 014522 90 EYP-TK----RQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 90 ~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~ 164 (423)
.+. .. ..+..++...+++.+++++.++.+. + +. +.+.|.+.+ +..++.||+||+||| +.|..
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-i--d~--~~v~V~~~~------G~~~i~~d~lViATG--s~p~~ 147 (455)
T 1ebd_A 81 KVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYF-V--DA--NTVRVVNGD------SAQTYTFKNAIIATG--SRPIE 147 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEE-E--ET--TEEEEEETT------EEEEEECSEEEECCC--EEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE-c--cC--CeEEEEeCC------CcEEEEeCEEEEecC--CCCCC
Confidence 000 01 1233445566677788888777543 3 33 566676654 435799999999999 78888
Q ss_pred CCCCCCCCCCceeeecCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHH
Q 014522 165 PDIEGLADFGGEVIHACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLM 244 (423)
Q Consensus 165 p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~ 244 (423)
|.++|.+. .+++..+... ....+++++|||+|.+|+|+|..|++.|.+|+++.+.+ .++|..+. +
T Consensus 148 ~~~~g~~~---~v~~~~~~~~-~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~-----~----- 212 (455)
T 1ebd_A 148 LPNFKFSN---RILDSTGALN-LGEVPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAG-EILSGFEK-----Q----- 212 (455)
T ss_dssp BTTBCCCS---SEECHHHHHT-CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSSTTSCH-----H-----
T ss_pred CCCCCccc---eEecHHHHhc-cccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC-ccccccCH-----H-----
Confidence 87777643 1333333222 22347899999999999999999999999999999988 45443221 1
Q ss_pred HhhccHHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeCC--eE
Q 014522 245 MKWLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISCG--QA 320 (423)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~--~v 320 (423)
....+.+.+++.+|+++.+ +.++..+ ++
T Consensus 213 ------------------------------------------------~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~ 244 (455)
T 1ebd_A 213 ------------------------------------------------MAAIIKKRLKKKGVEVVTNALAKGAEEREDGV 244 (455)
T ss_dssp ------------------------------------------------HHHHHHHHHHHTTCEEEESEEEEEEEEETTEE
T ss_pred ------------------------------------------------HHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeE
Confidence 1112334455678888876 6677632 33
Q ss_pred --EEc---cCcEecccEEEEcCCCCCCCCCc-cccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccCC---CcchhH
Q 014522 321 --ELI---NGEKLDIDAIVLATGYRSNVPSW-LQESEF-FSENGFPKAPFPHGWKGNAGLYAVGFTRRGLS---GASSDA 390 (423)
Q Consensus 321 --~~~---~g~~~~~D~vi~a~G~~~~~~~l-l~~~~~-~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~---~a~~~g 390 (423)
.+. +++++++|.||+|+|++|++..+ ++.+++ .+++|++.+| ++++|+.|+|||+|||+.... .|..||
T Consensus 245 ~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g 323 (455)
T 1ebd_A 245 TVTYEANGETKTIDADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVD-QQCRTSVPNIFAIGDIVPGPALAHKASYEG 323 (455)
T ss_dssp EEEEEETTEEEEEEESEEEECSCEEESCSSSSTTTTTCCBCTTSCBCCC-TTCBCSSTTEEECGGGSSSCCCHHHHHHHH
T ss_pred EEEEEeCCceeEEEcCEEEECcCCCcccCcCChhhcCCccCCCCCEeeC-CCcccCCCCEEEEeccCCCcccHHHHHHHH
Confidence 333 45689999999999999998433 677777 4567999998 578899999999999987544 689999
Q ss_pred HHHHHHHhh
Q 014522 391 MRIAQDIGK 399 (423)
Q Consensus 391 ~~~a~~i~~ 399 (423)
+.+|.+|.+
T Consensus 324 ~~aa~~i~~ 332 (455)
T 1ebd_A 324 KVAAEAIAG 332 (455)
T ss_dssp HHHHHHHTS
T ss_pred HHHHHHHcC
Confidence 999999986
No 35
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=9.2e-34 Score=274.29 Aligned_cols=284 Identities=17% Similarity=0.175 Sum_probs=200.5
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCC--EEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHH
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVP--FVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQF 97 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~--v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (423)
|+++|+|||||++|+++|..|+++|.+ |+|||+.+..+. ....+ +..+.. ....++.. +..
T Consensus 1 M~~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y-------~~~~l--~~~~~~--g~~~~~~~--~~~---- 63 (410)
T 3ef6_A 1 MATHVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPY-------DRPSL--SKAVLD--GSLERPPI--LAE---- 63 (410)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSB-------CSGGG--GTHHHH--TSSSSCCB--SSC----
T ss_pred CCCCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCc-------CCccc--cHHHhC--CCCCHHHh--cCC----
Confidence 356899999999999999999999987 999999876541 11000 000000 00000010 001
Q ss_pred HHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCCCCCCcee
Q 014522 98 IQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDIEGLADFGGEV 177 (423)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~~~~~~~~ 177 (423)
.+...+.+++++.+++|+.++... .. |++.+ + ..+.||+||+||| +.|..|.+||.+.. + +
T Consensus 64 ----~~~~~~~~i~~~~~~~v~~id~~~--~~--v~~~~------g-~~~~~d~lvlAtG--~~p~~~~ipG~~~~-~-v 124 (410)
T 3ef6_A 64 ----ADWYGEARIDMLTGPEVTALDVQT--RT--ISLDD------G-TTLSADAIVIATG--SRARTMALPGSQLP-G-V 124 (410)
T ss_dssp ----TTHHHHTTCEEEESCCEEEEETTT--TE--EEETT------S-CEEECSEEEECCC--EEECCCCCTTTTST-T-E
T ss_pred ----HHHHHHCCCEEEeCCEEEEEECCC--CE--EEECC------C-CEEECCEEEEccC--CcccCCCCCCcccc-c-e
Confidence 123345689999999999997654 43 77765 4 5899999999999 78888888886532 1 2
Q ss_pred eecCCCC-----CCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHhhccHHH
Q 014522 178 IHACDYK-----SGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPLWL 252 (423)
Q Consensus 178 ~~~~~~~-----~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (423)
++..... ......+++++|||+|.+|+|+|..|++.|.+|+++.+.+. +++... +
T Consensus 125 ~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~-~l~~~~----------------~--- 184 (410)
T 3ef6_A 125 VTLRTYGDVQVLRDSWTSATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDE-LLVRVL----------------G--- 184 (410)
T ss_dssp ECCCSHHHHHHHHHHCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS-SSHHHH----------------C---
T ss_pred EEeccHHHHHHHHHHhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCc-cchhhc----------------C---
Confidence 2211111 01123478999999999999999999999999999999983 322211 0
Q ss_pred HHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeCC----eEEEccCc
Q 014522 253 VDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISCG----QAELINGE 326 (423)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~----~v~~~~g~ 326 (423)
+.....+.+.+++.+|+++.+ +.++..+ ++.++||+
T Consensus 185 --------------------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~dg~ 226 (410)
T 3ef6_A 185 --------------------------------------RRIGAWLRGLLTELGVQVELGTGVVGFSGEGQLEQVMASDGR 226 (410)
T ss_dssp --------------------------------------HHHHHHHHHHHHHHTCEEECSCCEEEEECSSSCCEEEETTSC
T ss_pred --------------------------------------HHHHHHHHHHHHHCCCEEEeCCEEEEEeccCcEEEEEECCCC
Confidence 111112344455678898876 7888765 48889999
Q ss_pred EecccEEEEcCCCCCCCCCcccccccccCCCCCCCCCCCCCCCCCceEEEeeccccC------------CCcchhHHHHH
Q 014522 327 KLDIDAIVLATGYRSNVPSWLQESEFFSENGFPKAPFPHGWKGNAGLYAVGFTRRGL------------SGASSDAMRIA 394 (423)
Q Consensus 327 ~~~~D~vi~a~G~~~~~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~------------~~a~~~g~~~a 394 (423)
++++|.||+|+|+.|+. .+++.+++..++| +.+| .+++|+.|+|||+|||+... ..|..||+.+|
T Consensus 227 ~i~aD~Vv~a~G~~p~~-~l~~~~gl~~~~g-i~vd-~~~~t~~~~IyA~GD~a~~~~~~g~~~~~~~~~~A~~qg~~aa 303 (410)
T 3ef6_A 227 SFVADSALICVGAEPAD-QLARQAGLACDRG-VIVD-HCGATLAKGVFAVGDVASWPLRAGGRRSLETYMNAQRQAAAVA 303 (410)
T ss_dssp EEECSEEEECSCEEECC-HHHHHTTCCBSSS-EECC-TTSBCSSTTEEECGGGEEEEBTTSSEECCCCHHHHHHHHHHHH
T ss_pred EEEcCEEEEeeCCeecH-HHHHhCCCccCCe-EEEc-cCeeECCCCEEEEEcceeccCCCCCeeeechHHHHHHHHHHHH
Confidence 99999999999999997 6788888855566 6677 57789999999999998632 36889999999
Q ss_pred HHHhhh
Q 014522 395 QDIGKV 400 (423)
Q Consensus 395 ~~i~~~ 400 (423)
.+|.+.
T Consensus 304 ~~i~g~ 309 (410)
T 3ef6_A 304 AAILGK 309 (410)
T ss_dssp HHHTTC
T ss_pred HHHcCC
Confidence 999875
No 36
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=1.2e-33 Score=276.89 Aligned_cols=283 Identities=22% Similarity=0.300 Sum_probs=197.7
Q ss_pred cCCeEEECCChHHHHHHHHHHHc--CCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQ--GVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFI 98 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~--g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (423)
++||+|||||++|+++|..|++. +.+|+|||+.+..+.... .++. ..........+.
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~----------------~~p~-----~~~~~~~~~~~~ 61 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPC----------------GIPY-----VVEGLSTPDKLM 61 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC-----------------------------------------
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCc----------------CCcc-----ccCCCCCHHHhh
Confidence 46899999999999999999998 789999999876542110 0000 001111222233
Q ss_pred HHH-HHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCCCCCCcee
Q 014522 99 QYL-ESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDIEGLADFGGEV 177 (423)
Q Consensus 99 ~~~-~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~~~~~~~~ 177 (423)
.+. ..++++.+++++.+++|+.++. ..+.+.+.+ +...+.||+||+||| +.|..|.+||.+... +
T Consensus 62 ~~~~~~~~~~~gi~v~~~~~v~~i~~----~~~~v~~~~------g~~~~~~d~lviAtG--~~p~~p~i~G~~~~~--v 127 (449)
T 3kd9_A 62 YYPPEVFIKKRGIDLHLNAEVIEVDT----GYVRVRENG------GEKSYEWDYLVFANG--ASPQVPAIEGVNLKG--V 127 (449)
T ss_dssp ----CTHHHHTTCEEETTCEEEEECS----SEEEEECSS------SEEEEECSEEEECCC--EEECCCSCBTTTSTT--E
T ss_pred hcCHHHHHHhcCcEEEecCEEEEEec----CCCEEEECC------ceEEEEcCEEEECCC--CCCCCCCCCCCCCCC--E
Confidence 332 3344678999999999988854 345565543 436899999999999 788888888875421 1
Q ss_pred eecCCCCC-------CCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecc-cccCCChHHHHHHHHhhcc
Q 014522 178 IHACDYKS-------GEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPR-EILGKSTFELATLMMKWLP 249 (423)
Q Consensus 178 ~~~~~~~~-------~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 249 (423)
+......+ ...+.+++++|||+|.+|+|+|..|++.|.+|+++.|.+ .+++. .+.
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~---------------- 190 (449)
T 3kd9_A 128 FTADLPPDALAIREYMEKYKVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGE-RVLRRSFDK---------------- 190 (449)
T ss_dssp ECSCSTHHHHHHHHHHSSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-STTTTTSCH----------------
T ss_pred EEeCCHHHHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCC-ccchhhcCH----------------
Confidence 21111100 012257899999999999999999999999999999998 44343 221
Q ss_pred HHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeCCe---EEEcc
Q 014522 250 LWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISCGQ---AELIN 324 (423)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~~---v~~~~ 324 (423)
.....+.+.+++. |+++.+ +.++..++ ..+.+
T Consensus 191 ------------------------------------------~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~~v~~v~~~ 227 (449)
T 3kd9_A 191 ------------------------------------------EVTDILEEKLKKH-VNLRLQEITMKIEGEERVEKVVTD 227 (449)
T ss_dssp ------------------------------------------HHHHHHHHHHTTT-SEEEESCCEEEEECSSSCCEEEET
T ss_pred ------------------------------------------HHHHHHHHHHHhC-cEEEeCCeEEEEeccCcEEEEEeC
Confidence 1112233445555 887765 67776543 34668
Q ss_pred CcEecccEEEEcCCCCCCCCCccccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccc------c----C---CCcchhH
Q 014522 325 GEKLDIDAIVLATGYRSNVPSWLQESEF-FSENGFPKAPFPHGWKGNAGLYAVGFTRR------G----L---SGASSDA 390 (423)
Q Consensus 325 g~~~~~D~vi~a~G~~~~~~~ll~~~~~-~~~~g~~~~~~~~~~~~~~~vya~Gd~~~------~----~---~~a~~~g 390 (423)
++++++|.||+|+|++|++ .+++.+++ .+++|++.+| .+++|+.|+|||+|||+. + + ..|..||
T Consensus 228 g~~i~~D~Vv~a~G~~p~~-~l~~~~gl~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~g 305 (449)
T 3kd9_A 228 AGEYKAELVILATGIKPNI-ELAKQLGVRIGETGAIWTN-EKMQTSVENVYAAGDVAETRHVITGRRVWVPLAPAGNKMG 305 (449)
T ss_dssp TEEEECSEEEECSCEEECC-HHHHHTTCCBCTTSSBCCC-TTCBCSSTTEEECSTTBCEEBTTTCSEECCCCHHHHHHHH
T ss_pred CCEEECCEEEEeeCCccCH-HHHHhCCccCCCCCCEEEC-CCCccCCCCEEEeeeeeeeccccCCceEEeccHHHHHHHH
Confidence 8899999999999999998 67787887 5678999999 588899999999999974 1 1 2688999
Q ss_pred HHHHHHHhhh
Q 014522 391 MRIAQDIGKV 400 (423)
Q Consensus 391 ~~~a~~i~~~ 400 (423)
+.+|.+|.+.
T Consensus 306 ~~aa~~i~g~ 315 (449)
T 3kd9_A 306 YVAGSNIAGK 315 (449)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHhcCC
Confidence 9999999864
No 37
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=7.5e-35 Score=277.41 Aligned_cols=276 Identities=17% Similarity=0.173 Sum_probs=196.5
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
-.||+|||||+||+++|..|++.| +|+|||+.+..+ | ....+ +.. +... .....+..+
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~--~-----~~~~l--~~~---~~g~---------~~~~~~~~~ 65 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPY--Y-----SKPML--SHY---IAGF---------IPRNRLFPY 65 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCC--C-----CSTTH--HHH---HTTS---------SCGGGGCSS
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCc--c-----ccchh--HHH---HhCC---------CCHHHhccC
Confidence 458999999999999999999999 999999987542 1 00000 000 0000 001111111
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCCCCCCceeeec
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDIEGLADFGGEVIHA 180 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~~~~~~~~~~~ 180 (423)
..+.+++.+++++.+++|+.++... . .|+ .+ + .++.||+||+||| +.|..|.+||.+ .+++.
T Consensus 66 ~~~~~~~~~v~~~~g~~v~~id~~~--~--~V~-~~------g-~~~~~d~lViATG--s~p~~p~i~G~~----~v~~~ 127 (367)
T 1xhc_A 66 SLDWYRKRGIEIRLAEEAKLIDRGR--K--VVI-TE------K-GEVPYDTLVLATG--ARAREPQIKGKE----YLLTL 127 (367)
T ss_dssp CHHHHHHHTEEEECSCCEEEEETTT--T--EEE-ES------S-CEEECSEEEECCC--EEECCCCSBTGG----GEECC
T ss_pred CHHHHHhCCcEEEECCEEEEEECCC--C--EEE-EC------C-cEEECCEEEECCC--CCCCCCCCCCcC----CEEEE
Confidence 2333456689988998899887543 3 365 33 3 5799999999999 888888888832 22332
Q ss_pred CCCCCCCC-----CCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHhhccHHHHHH
Q 014522 181 CDYKSGEK-----YKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPLWLVDK 255 (423)
Q Consensus 181 ~~~~~~~~-----~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (423)
....+... ..+++++|||+|.+|+|+|..|++.|.+|+++.|.+ .++| .+
T Consensus 128 ~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~-~~----------------------- 182 (367)
T 1xhc_A 128 RTIFDADRIKESIENSGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGA-MFLG-LD----------------------- 182 (367)
T ss_dssp CSHHHHHHHHHHHHHHSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSS-CCTT-CC-----------------------
T ss_pred cCHHHHHHHHHHhhcCCcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCC-eecc-CC-----------------------
Confidence 22211111 135899999999999999999999999999999998 4444 21
Q ss_pred HHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeCCeEEEccCcEecccEE
Q 014522 256 ILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISCGQAELINGEKLDIDAI 333 (423)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~~v~~~~g~~~~~D~v 333 (423)
+.....+.+.+++.+|+++++ +.+++.+++++++|+ +++|.|
T Consensus 183 -----------------------------------~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~v~~~~g~-i~~D~v 226 (367)
T 1xhc_A 183 -----------------------------------EELSNMIKDMLEETGVKFFLNSELLEANEEGVLTNSGF-IEGKVK 226 (367)
T ss_dssp -----------------------------------HHHHHHHHHHHHHTTEEEECSCCEEEECSSEEEETTEE-EECSCE
T ss_pred -----------------------------------HHHHHHHHHHHHHCCCEEEcCCEEEEEEeeEEEECCCE-EEcCEE
Confidence 111112344466779999887 888887789999988 999999
Q ss_pred EEcCCCCCCCCCcccccccccCCCCCCCCCCCCCCCCCceEEEeecccc-------CCCcchhHHHHHHHHhhh
Q 014522 334 VLATGYRSNVPSWLQESEFFSENGFPKAPFPHGWKGNAGLYAVGFTRRG-------LSGASSDAMRIAQDIGKV 400 (423)
Q Consensus 334 i~a~G~~~~~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~-------~~~a~~~g~~~a~~i~~~ 400 (423)
|+|+|++|++ .+++.+++..++| +.+| .+++|+.|+|||+|||+.. ...|..||+.+|.+|.+.
T Consensus 227 i~a~G~~p~~-~ll~~~gl~~~~g-i~Vd-~~~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g~ 297 (367)
T 1xhc_A 227 ICAIGIVPNV-DLARRSGIHTGRG-ILID-DNFRTSAKDVYAIGDCAEYSGIIAGTAKAAMEQARVLADILKGE 297 (367)
T ss_dssp EEECCEEECC-HHHHHTTCCBSSS-EECC-TTSBCSSTTEEECGGGEEBTTBCCCSHHHHHHHHHHHHHHHTTC
T ss_pred EECcCCCcCH-HHHHhCCCCCCCC-EEEC-CCcccCCCCEEEeEeeeecCCCCccHHHHHHHHHHHHHHHhcCC
Confidence 9999999998 5788888755566 6677 5788999999999999742 126889999999999864
No 38
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=1.4e-33 Score=285.70 Aligned_cols=292 Identities=18% Similarity=0.284 Sum_probs=213.8
Q ss_pred cccCCeEEECCChHHHHHHHHHHHc--CCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHH
Q 014522 19 IWVNGPVIVGAGPSGLATAACLRDQ--GVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQ 96 (423)
Q Consensus 19 ~~~~~vvIIGaG~aGl~~A~~L~~~--g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (423)
++++||+|||||++|+++|..|++. |.+|+|||+.+.++ |....+ +.. +... .......
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~-------~~~~~l--p~~---~~g~-------~~~~~~~ 94 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYIS-------FANCGL--PYY---IGGV-------ITERQKL 94 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSS-------BCGGGH--HHH---HTTS-------SCCGGGG
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcc-------ccCCCC--chh---hcCc-------CCChHHh
Confidence 4578999999999999999999999 88999999988654 111000 000 0000 0012222
Q ss_pred HHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCCCCCCce
Q 014522 97 FIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDIEGLADFGGE 176 (423)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~~~~~~~ 176 (423)
+..++.+++++++++++++++|+.++... +.+.+.... + +....+.||+||+||| +.|..|.+||.....+
T Consensus 95 ~~~~~~~~~~~~gi~v~~~~~V~~id~~~--~~v~v~~~~-~---g~~~~~~~d~lviAtG--~~p~~p~i~G~~~~~~- 165 (588)
T 3ics_A 95 LVQTVERMSKRFNLDIRVLSEVVKINKEE--KTITIKNVT-T---NETYNEAYDVLILSPG--AKPIVPSIPGIEEAKA- 165 (588)
T ss_dssp BSSCHHHHHHHTTCEEECSEEEEEEETTT--TEEEEEETT-T---CCEEEEECSEEEECCC--EEECCCCCTTTTTCTT-
T ss_pred hccCHHHHHHhcCcEEEECCEEEEEECCC--CEEEEeecC-C---CCEEEEeCCEEEECCC--CCCCCCCCCCcccCCC-
Confidence 34566777778899999999999998765 665554321 1 1335799999999999 7888888998743322
Q ss_pred eeecCCCCCCC-------CCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHhhcc
Q 014522 177 VIHACDYKSGE-------KYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLP 249 (423)
Q Consensus 177 ~~~~~~~~~~~-------~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (423)
+++.....+.. ...+++++|||+|.+|+|+|..|++.|.+|+++.+.+ .++|..+.
T Consensus 166 v~~~~~~~~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~---------------- 228 (588)
T 3ics_A 166 LFTLRNVPDTDRIKAYIDEKKPRHATVIGGGFIGVEMVENLRERGIEVTLVEMAN-QVMPPIDY---------------- 228 (588)
T ss_dssp EEECSSHHHHHHHHHHHHHHCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSCTTSCH----------------
T ss_pred eEEeCCHHHHHHHHHHHhhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-cccccCCH----------------
Confidence 22222211110 2357899999999999999999999999999999988 45454321
Q ss_pred HHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeC--CeEEEccC
Q 014522 250 LWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISC--GQAELING 325 (423)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~--~~v~~~~g 325 (423)
.....+.+.+++.+|+++.+ +.++.. +++.+.+|
T Consensus 229 ------------------------------------------~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~~~g 266 (588)
T 3ics_A 229 ------------------------------------------EMAAYVHEHMKNHDVELVFEDGVDALEENGAVVRLKSG 266 (588)
T ss_dssp ------------------------------------------HHHHHHHHHHHHTTCEEECSCCEEEEEGGGTEEEETTS
T ss_pred ------------------------------------------HHHHHHHHHHHHcCCEEEECCeEEEEecCCCEEEECCC
Confidence 11122344566778999876 788876 56889999
Q ss_pred cEecccEEEEcCCCCCCCCCccccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccc-------c---CC---CcchhHH
Q 014522 326 EKLDIDAIVLATGYRSNVPSWLQESEF-FSENGFPKAPFPHGWKGNAGLYAVGFTRR-------G---LS---GASSDAM 391 (423)
Q Consensus 326 ~~~~~D~vi~a~G~~~~~~~ll~~~~~-~~~~g~~~~~~~~~~~~~~~vya~Gd~~~-------~---~~---~a~~~g~ 391 (423)
+++++|.||+|+|++|++ .+++.+++ .+++|++.+| .+++|+.|+|||+|||+. . +. .|..||+
T Consensus 267 ~~i~~D~Vi~a~G~~p~~-~~l~~~g~~~~~~g~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~ 344 (588)
T 3ics_A 267 SVIQTDMLILAIGVQPES-SLAKGAGLALGVRGTIKVN-EKFQTSDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGR 344 (588)
T ss_dssp CEEECSEEEECSCEEECC-HHHHHTTCCBCGGGCBCCC-TTSBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHH
T ss_pred CEEEcCEEEEccCCCCCh-HHHHhcCceEcCCCCEEEC-CccccCCCCEEEeeeeeecccccCCcccccccHHHHHHHHH
Confidence 999999999999999997 67888887 5678999999 688999999999999983 1 11 5889999
Q ss_pred HHHHHHhh
Q 014522 392 RIAQDIGK 399 (423)
Q Consensus 392 ~~a~~i~~ 399 (423)
.+|.+|.+
T Consensus 345 ~aa~~i~g 352 (588)
T 3ics_A 345 MLADIIHG 352 (588)
T ss_dssp HHHHHHTT
T ss_pred HHHHHhcC
Confidence 99999987
No 39
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=1e-33 Score=279.21 Aligned_cols=296 Identities=16% Similarity=0.209 Sum_probs=194.7
Q ss_pred cCCeEEECCChHHHHHHHHHHHc--CCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQ--GVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFI 98 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~--g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (423)
++||+|||||++|+++|..|+++ |.+|+|||+++.++ |. ... .+.. +... .+.....++....+.
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~--~~-----~~g--l~~~---~~g~-~~~~~~~~~~~~~~~ 69 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRIS--YG-----GCG--IPYY---VSGE-VSNIESLQATPYNVV 69 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---------------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccc--cc-----ccc--cchh---hcCC-CCchHHhccccchhc
Confidence 46899999999999999999999 89999999987653 11 000 0000 0000 000000001112245
Q ss_pred HHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCCCCCCceee
Q 014522 99 QYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDIEGLADFGGEVI 178 (423)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~~~~~~~~~ 178 (423)
.+...+.++.+++++++++|+.++... ..+.+.... ++ ....+.||+||+||| +.|..|.+||.+. .+ ++
T Consensus 70 ~~~~~~~~~~gi~~~~~~~V~~id~~~--~~v~~~~~~-~g---~~~~~~~d~lviAtG--~~p~~p~i~G~~~-~~-v~ 139 (472)
T 3iwa_A 70 RDPEFFRINKDVEALVETRAHAIDRAA--HTVEIENLR-TG---ERRTLKYDKLVLALG--SKANRPPVEGMDL-AG-VT 139 (472)
T ss_dssp -----------CEEECSEEEEEEETTT--TEEEEEETT-TC---CEEEEECSEEEECCC--EEECCCSCTTTTS-BT-EE
T ss_pred cCHHHHhhhcCcEEEECCEEEEEECCC--CEEEEeecC-CC---CEEEEECCEEEEeCC--CCcCCCCCCCCCC-CC-EE
Confidence 566666667789999999999998765 665554411 11 335899999999999 7888888888752 12 22
Q ss_pred ecCCCCC--C-----CCCCCCEEEEECCCCCHHHHHHHHhcc-CCccEEEEecCceeec-ccccCCChHHHHHHHHhhcc
Q 014522 179 HACDYKS--G-----EKYKGKKVLVVGCGNSGMELSLDLSNH-NASPSMVVRSSVHVLP-REILGKSTFELATLMMKWLP 249 (423)
Q Consensus 179 ~~~~~~~--~-----~~~~~~~v~ViG~G~~~~e~a~~l~~~-g~~V~~v~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 249 (423)
+.....+ . ....+++++|||+|.+|+|+|..|++. |.+|+++.|.+ .+++ ...
T Consensus 140 ~~~~~~~~~~l~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~-~~l~~~~~----------------- 201 (472)
T 3iwa_A 140 PVTNLDEAEFVQHAISAGEVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELAD-QIMPGFTS----------------- 201 (472)
T ss_dssp ECCSHHHHHHHHHHCCTTSCSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSS-SSSTTTSC-----------------
T ss_pred EeCCHHHHHHHHHHhhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccC-cccccccC-----------------
Confidence 2221110 0 113478999999999999999999999 99999999988 4444 222
Q ss_pred HHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeC-Ce---EEEc
Q 014522 250 LWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISC-GQ---AELI 323 (423)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~-~~---v~~~ 323 (423)
+.+...+.+.+++.+|+++.+ +.++.. ++ +.+.
T Consensus 202 -----------------------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~ 240 (472)
T 3iwa_A 202 -----------------------------------------KSLSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVARVIT 240 (472)
T ss_dssp -----------------------------------------HHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEE
T ss_pred -----------------------------------------HHHHHHHHHHHHhcCCEEEeCCEEEEEEccCCeEEEEEe
Confidence 112222344566778999876 777765 32 6778
Q ss_pred cCcEecccEEEEcCCCCCCCCCccccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccc-------c------CCCcchh
Q 014522 324 NGEKLDIDAIVLATGYRSNVPSWLQESEF-FSENGFPKAPFPHGWKGNAGLYAVGFTRR-------G------LSGASSD 389 (423)
Q Consensus 324 ~g~~~~~D~vi~a~G~~~~~~~ll~~~~~-~~~~g~~~~~~~~~~~~~~~vya~Gd~~~-------~------~~~a~~~ 389 (423)
+|+++++|.||+|+|+.|+. .+++.+++ .+++|++.+| .+++|+.|+|||+|||+. . ...|..|
T Consensus 241 ~g~~i~aD~Vv~a~G~~p~~-~l~~~~gl~~~~~g~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~ 318 (472)
T 3iwa_A 241 DKRTLDADLVILAAGVSPNT-QLARDAGLELDPRGAIIVD-TRMRTSDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQ 318 (472)
T ss_dssp SSCEEECSEEEECSCEEECC-HHHHHHTCCBCTTCCEECC-TTCBCSSTTEEECGGGEEEEBTTTSSEECCCCTTHHHHH
T ss_pred CCCEEEcCEEEECCCCCcCH-HHHHhCCccCCCCCCEEEC-CCcccCCCCEEEeccceecccccCCceeecchHHHHHHH
Confidence 99999999999999999997 57777787 5678999998 578899999999999983 1 1258899
Q ss_pred HHHHHHHHhhh
Q 014522 390 AMRIAQDIGKV 400 (423)
Q Consensus 390 g~~~a~~i~~~ 400 (423)
|+.+|.+|.+.
T Consensus 319 g~~aa~~i~g~ 329 (472)
T 3iwa_A 319 GRVIGTNLADG 329 (472)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHhcCC
Confidence 99999999864
No 40
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=100.00 E-value=1.7e-33 Score=278.59 Aligned_cols=288 Identities=21% Similarity=0.247 Sum_probs=201.8
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcC---CCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHH
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQG---VPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQ 96 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g---~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (423)
|.+||+|||||++|+++|..|++.| .+|+|||+.+..+..+... ....... ...+..
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~-----~~~~~~~------~~~~~~--------- 93 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGM-----ALWIGEQ------IAGPEG--------- 93 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGH-----HHHHTTS------SSCSGG---------
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCcccccc-----chhhcCc------cCCHHH---------
Confidence 4589999999999999999999998 9999999987654322110 0000000 000000
Q ss_pred HHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCCC-----
Q 014522 97 FIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDIEGLA----- 171 (423)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~~----- 171 (423)
+.....+.+.+++++++.+++|+.++... +.+.+.. + ++..++.||+||+||| +.|..|.+||.+
T Consensus 94 ~~~~~~~~~~~~gv~v~~~~~v~~i~~~~--~~v~v~~-~-----g~~~~~~~d~lviAtG--~~p~~p~i~G~~~~~~~ 163 (490)
T 2bc0_A 94 LFYSDKEELESLGAKVYMESPVQSIDYDA--KTVTALV-D-----GKNHVETYDKLIFATG--SQPILPPIKGAEIKEGS 163 (490)
T ss_dssp GBSCCHHHHHHTTCEEETTCCEEEEETTT--TEEEEEE-T-----TEEEEEECSEEEECCC--EEECCCSCBTCCBCTTC
T ss_pred hhhcCHHHHHhCCCEEEeCCEEEEEECCC--CEEEEEe-C-----CcEEEEECCEEEECCC--CCcCCCCCCCccccccc
Confidence 00011233456789988999999987655 6644432 2 0236799999999999 788888888876
Q ss_pred -CCC---ceeeecCCCCC-----C--CCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecc-cccCCChHH
Q 014522 172 -DFG---GEVIHACDYKS-----G--EKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPR-EILGKSTFE 239 (423)
Q Consensus 172 -~~~---~~~~~~~~~~~-----~--~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~-~~~~~~~~~ 239 (423)
.+. ..+++...+.+ . ....+++++|||+|.+|+|+|..|++.|.+|+++.|.+ .+++. .+
T Consensus 164 ~~f~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~~------- 235 (490)
T 2bc0_A 164 LEFEATLENLQFVKLYQNSADVIAKLENKDIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVD-TCLAGYYD------- 235 (490)
T ss_dssp TTCCBSSTTEEECSSHHHHHHHHHHTTSTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-STTTTTSC-------
T ss_pred cccccccCCEEEeCCHHHHHHHHHHhhhcCCceEEEECCCHHHHHHHHHHHHCCCeEEEEEccc-chhhhHHH-------
Confidence 221 12333221111 0 11457899999999999999999999999999999998 44341 11
Q ss_pred HHHHHHhhccHHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeC
Q 014522 240 LATLMMKWLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISC 317 (423)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~ 317 (423)
+.+...+.+.+++.+|+++.+ +.++..
T Consensus 236 ---------------------------------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~ 264 (490)
T 2bc0_A 236 ---------------------------------------------------RDLTDLMAKNMEEHGIQLAFGETVKEVAG 264 (490)
T ss_dssp ---------------------------------------------------HHHHHHHHHHHHTTTCEEEETCCEEEEEC
T ss_pred ---------------------------------------------------HHHHHHHHHHHHhCCeEEEeCCEEEEEEc
Confidence 111222345566778999876 777765
Q ss_pred Ce----EEEccCcEecccEEEEcCCCCCCCCCccccccc-ccCCCCCCCCCCCCCCCCCceEEEeecccc----------
Q 014522 318 GQ----AELINGEKLDIDAIVLATGYRSNVPSWLQESEF-FSENGFPKAPFPHGWKGNAGLYAVGFTRRG---------- 382 (423)
Q Consensus 318 ~~----v~~~~g~~~~~D~vi~a~G~~~~~~~ll~~~~~-~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~---------- 382 (423)
++ +.+ +|+++++|.||+|+|++|++ .+++.. + .+++|++.+| .+++|+.|+|||+|||+..
T Consensus 265 ~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~~-~ll~~~-l~~~~~G~I~Vd-~~~~t~~~~IyA~GD~~~~~~~~~g~~~~ 340 (490)
T 2bc0_A 265 NGKVEKIIT-DKNEYDVDMVILAVGFRPNT-TLGNGK-IDLFRNGAFLVN-KRQETSIPGVYAIGDCATIYDNATRDTNY 340 (490)
T ss_dssp SSSCCEEEE-SSCEEECSEEEECCCEEECC-GGGTTC-SCBCTTSCBCCC-TTCBCSSTTEEECGGGBCEEETTTTEEEC
T ss_pred CCcEEEEEE-CCcEEECCEEEECCCCCcCh-HHHHhh-hccCCCCCEEEC-CCcccCCCCEEEeeeeEEeccccCCceee
Confidence 43 444 78899999999999999998 577666 5 4568999999 5789999999999999863
Q ss_pred ---CCCcchhHHHHHHHHhhh
Q 014522 383 ---LSGASSDAMRIAQDIGKV 400 (423)
Q Consensus 383 ---~~~a~~~g~~~a~~i~~~ 400 (423)
...|..||+.+|.+|.+.
T Consensus 341 ~~~~~~A~~qg~~aa~~i~g~ 361 (490)
T 2bc0_A 341 IALASNAVRTGIVAAHNACGT 361 (490)
T ss_dssp CCCHHHHHHHHHHHHHHHTTC
T ss_pred cccHHHHHHHHHHHHHHhcCC
Confidence 126899999999999863
No 41
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=100.00 E-value=2.5e-33 Score=278.11 Aligned_cols=306 Identities=15% Similarity=0.125 Sum_probs=208.7
Q ss_pred cCCeEEECCChHHHHHHHHHHHc---CCCEEEEecCCCCCcccccccC-CceeecCCC----ccccCCCCCCCCCC-CCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQ---GVPFVMLERAECIASLWQKRTY-DRLNLHLPK----QFCQLPKLQFPEDF-PEY 91 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~---g~~v~lie~~~~~gg~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~-~~~ 91 (423)
++||+|||||++|+++|..|++. |.+|+|||+.+ +||+|..... +...+.... ....+..+.++... ...
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~~~ 80 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAK 80 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC------C
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCCCc
Confidence 57999999999999999999999 99999999988 8887654211 100000000 00001111111000 000
Q ss_pred CCHHH-----------HHHHHHHHHHHcCCceeccceEEEEEEeC--CCCeEEEEEcccCCCCCce-EEEEeCEEEEccC
Q 014522 92 PTKRQ-----------FIQYLESYAEKFEINPRFNECVQSARYDE--TSGLWRVKTASSAGSTKTE-FEYICRWLVVATG 157 (423)
Q Consensus 92 ~~~~~-----------~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~v~~~~~~~~~~~~-~~~~~d~vviAtG 157 (423)
..... +..++.+.+++.+++++.++ +..++... ..+.+.|.+.+ +. ..+.||+||+|||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i~~~~~~~~~~~~V~~~~------g~~~~~~~d~lviATG 153 (499)
T 1xdi_A 81 ISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGR-GELIDSTPGLARHRIKATAAD------GSTSEHEADVVLVATG 153 (499)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESE-EEECCSSSCCSSEEEEEECTT------SCEEEEEESEEEECCC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEecCcccCCCCEEEEEeCC------CcEEEEEeCEEEEcCC
Confidence 12222 23345666677888877775 55544310 01344455443 32 4799999999999
Q ss_pred CCCCCcCCCCCCCCCCCceeeecCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCCh
Q 014522 158 ENAERVMPDIEGLADFGGEVIHACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKST 237 (423)
Q Consensus 158 ~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~ 237 (423)
+.|..|.++|.+.. .+++..+... ....+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ .++|..+.
T Consensus 154 --s~p~~p~i~g~~~~--~v~~~~~~~~-~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~---- 223 (499)
T 1xdi_A 154 --ASPRILPSAQPDGE--RILTWRQLYD-LDALPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQD-HVLPYEDA---- 223 (499)
T ss_dssp --EEECCCGGGCCCSS--SEEEGGGGGG-CSSCCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSS-SSSCCSSH----
T ss_pred --CCCCCCCCCCCCcC--cEEehhHhhh-hhccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCC-ccccccCH----
Confidence 78888888886543 2334333332 22356899999999999999999999999999999998 45454321
Q ss_pred HHHHHHHHhhccHHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEE
Q 014522 238 FELATLMMKWLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRI 315 (423)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~ 315 (423)
.....+.+.+++.+|+++.+ +.++
T Consensus 224 ------------------------------------------------------~~~~~l~~~l~~~GV~i~~~~~V~~i 249 (499)
T 1xdi_A 224 ------------------------------------------------------DAALVLEESFAERGVRLFKNARAASV 249 (499)
T ss_dssp ------------------------------------------------------HHHHHHHHHHHHTTCEEETTCCEEEE
T ss_pred ------------------------------------------------------HHHHHHHHHHHHCCCEEEeCCEEEEE
Confidence 11122344566678999876 7777
Q ss_pred eCCe----EEEccCcEecccEEEEcCCCCCCCCCc--cccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccCC---C
Q 014522 316 SCGQ----AELINGEKLDIDAIVLATGYRSNVPSW--LQESEF-FSENGFPKAPFPHGWKGNAGLYAVGFTRRGLS---G 385 (423)
Q Consensus 316 ~~~~----v~~~~g~~~~~D~vi~a~G~~~~~~~l--l~~~~~-~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~---~ 385 (423)
..++ +.+.+|+++++|.||+|+|++|++ .+ ++.+++ .+++|++.+| .+++|+.|+|||+|||+.... .
T Consensus 250 ~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~-~~l~l~~~gl~~~~~G~i~Vd-~~~~t~~~~IyA~GD~~~~~~l~~~ 327 (499)
T 1xdi_A 250 TRTGAGVLVTMTDGRTVEGSHALMTIGSVPNT-SGLGLERVGIQLGRGNYLTVD-RVSRTLATGIYAAGDCTGLLPLASV 327 (499)
T ss_dssp EECSSSEEEEETTSCEEEESEEEECCCEEECC-SSSCTTTTTCCCBTTTBCCCC-SSSBCSSTTEEECSGGGTSCSCHHH
T ss_pred EEeCCEEEEEECCCcEEEcCEEEECCCCCcCC-CcCCchhcCceECCCCCEEEC-CCcccCCCCEEEEeccCCCcccHHH
Confidence 6442 445678899999999999999998 55 677787 4667999998 578899999999999997644 6
Q ss_pred cchhHHHHHHHHhhh
Q 014522 386 ASSDAMRIAQDIGKV 400 (423)
Q Consensus 386 a~~~g~~~a~~i~~~ 400 (423)
|..||+++|.+|.+.
T Consensus 328 A~~~g~~aa~~i~g~ 342 (499)
T 1xdi_A 328 AAMQGRIAMYHALGE 342 (499)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhcCC
Confidence 899999999999864
No 42
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=100.00 E-value=4.7e-33 Score=275.29 Aligned_cols=302 Identities=15% Similarity=0.162 Sum_probs=203.4
Q ss_pred ccCCeEEECCChHHHHHHHHHHH-cCCCEEEEe--------cCCCCCccccccc-CCceeecCCCc----cccCCCCCCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRD-QGVPFVMLE--------RAECIASLWQKRT-YDRLNLHLPKQ----FCQLPKLQFP 85 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~-~g~~v~lie--------~~~~~gg~~~~~~-~~~~~~~~~~~----~~~~~~~~~~ 85 (423)
+++||+|||||++|+++|..|++ .|++|+||| +...+||+|.... .+...+..... ......+.+.
T Consensus 6 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~ 85 (495)
T 2wpf_A 6 KAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWE 85 (495)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred cccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhcCcc
Confidence 36899999999999999999999 999999999 3567888775421 11100000000 0000000000
Q ss_pred CCCC-CCCCHHHHHHH-----------HHHHHHHc-CCceeccceEEEEEEeCCCCeEEEEEcccCCCCCc-----eEEE
Q 014522 86 EDFP-EYPTKRQFIQY-----------LESYAEKF-EINPRFNECVQSARYDETSGLWRVKTASSAGSTKT-----EFEY 147 (423)
Q Consensus 86 ~~~~-~~~~~~~~~~~-----------~~~~~~~~-~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~-----~~~~ 147 (423)
...+ .......+.++ +...+++. +++++.++ +..++ . .. |.+.+.. + ...+
T Consensus 86 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~-~~~i~--~--~~--v~v~~~~----~~~~~~~~~~ 154 (495)
T 2wpf_A 86 FDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGW-GSLES--K--NV--VVVRETA----DPKSAVKERL 154 (495)
T ss_dssp CCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEESE-EEEEE--T--TE--EEEESSS----STTSCEEEEE
T ss_pred cCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeE-EEEee--C--CE--EEEeecC----CccCCCCeEE
Confidence 0000 00122222222 23334556 77766664 54443 2 33 5554100 1 3689
Q ss_pred EeCEEEEccCCCCCCcCCCCCCCCCCCceeeecCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhcc---CCccEEEEecC
Q 014522 148 ICRWLVVATGENAERVMPDIEGLADFGGEVIHACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNH---NASPSMVVRSS 224 (423)
Q Consensus 148 ~~d~vviAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~---g~~V~~v~r~~ 224 (423)
.||+||+||| +.|..|.+||.+. .++..+... ....+++++|||+|.+|+|+|..|++. |.+|+++.|.+
T Consensus 155 ~~d~lViATG--s~p~~p~i~G~~~----~~~~~~~~~-~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~ 227 (495)
T 2wpf_A 155 QADHILLATG--SWPQMPAIPGIEH----CISSNEAFY-LPEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNN 227 (495)
T ss_dssp EEEEEEECCC--EEECCCCCTTGGG----CEEHHHHTT-CSSCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred EcCEEEEeCC--CCcCCCCCCCccc----cccHHHHHh-hhhcCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCC
Confidence 9999999999 7888888888742 233322222 223578999999999999999999999 99999999998
Q ss_pred ceeecccccCCChHHHHHHHHhhccHHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcC
Q 014522 225 VHVLPREILGKSTFELATLMMKWLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSG 304 (423)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (423)
.++|..+. + ....+.+.+++.
T Consensus 228 -~~l~~~d~-----~-----------------------------------------------------~~~~l~~~l~~~ 248 (495)
T 2wpf_A 228 -LILRGFDE-----T-----------------------------------------------------IREEVTKQLTAN 248 (495)
T ss_dssp -SSCTTSCH-----H-----------------------------------------------------HHHHHHHHHHHT
T ss_pred -ccccccCH-----H-----------------------------------------------------HHHHHHHHHHhC
Confidence 45454321 1 111234445667
Q ss_pred CeEEecC--ceEEeCC-----eEEEccCcEecccEEEEcCCCCCCCCCc-cccccc-ccCCCCCCCCCCCCCCCCCceEE
Q 014522 305 HINVVPG--IKRISCG-----QAELINGEKLDIDAIVLATGYRSNVPSW-LQESEF-FSENGFPKAPFPHGWKGNAGLYA 375 (423)
Q Consensus 305 ~i~~~~~--i~~~~~~-----~v~~~~g~~~~~D~vi~a~G~~~~~~~l-l~~~~~-~~~~g~~~~~~~~~~~~~~~vya 375 (423)
+|+++.+ +.++..+ .+.+.+|+++++|.||+|+|++|++..| ++.+++ .+++|++.+| .+++|+.|+|||
T Consensus 249 GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~i~Vd-~~~~t~~~~IyA 327 (495)
T 2wpf_A 249 GIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVD-EFSRTNVPNIYA 327 (495)
T ss_dssp TCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEECCGGGTGGGTTCCBCTTSSBCCC-TTCBCSSTTEEE
T ss_pred CCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCcccccccchhhcCccCCCCCCEEEC-CCCccCCCCEEE
Confidence 8898876 7777643 3677889899999999999999998445 677788 4568999998 578899999999
Q ss_pred EeeccccCC---CcchhHHHHHHHHhh
Q 014522 376 VGFTRRGLS---GASSDAMRIAQDIGK 399 (423)
Q Consensus 376 ~Gd~~~~~~---~a~~~g~~~a~~i~~ 399 (423)
+|||++.+. .|..||+.+|.+|.+
T Consensus 328 ~GD~~~~~~l~~~A~~~g~~aa~~i~g 354 (495)
T 2wpf_A 328 IGDITDRLMLTPVAINEGAALVDTVFG 354 (495)
T ss_dssp CGGGGCSCCCHHHHHHHHHHHHHHHHS
T ss_pred EeccCCCccCHHHHHHHHHHHHHHhcC
Confidence 999997543 689999999999986
No 43
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=7.3e-34 Score=286.69 Aligned_cols=290 Identities=21% Similarity=0.261 Sum_probs=205.7
Q ss_pred cCCeEEECCChHHHHHHHHHHHc--CCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQ--GVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFI 98 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~--g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (423)
|+||+|||||++|+++|..|+++ +.+|+|||+.+.++- ....+ +. .+... .......+.
T Consensus 1 M~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~-------~~~~l--~~---~~~~~-------~~~~~~~~~ 61 (565)
T 3ntd_A 1 MKKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSF-------ANCGL--PY---HISGE-------IAQRSALVL 61 (565)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSB-------CGGGH--HH---HHTSS-------SCCGGGGBC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccc-------cccCc--hH---HhcCC-------cCChHHhhc
Confidence 46899999999999999999998 789999999886541 11000 00 00000 001122233
Q ss_pred HHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCCCCCCceee
Q 014522 99 QYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDIEGLADFGGEVI 178 (423)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~~~~~~~~~ 178 (423)
.+...+.++++++++++++|++++... +.+.+.... ++ ....+.||+||+||| +.|..|.+||.+.... +
T Consensus 62 ~~~~~~~~~~~i~~~~~~~V~~id~~~--~~v~~~~~~-~g---~~~~~~~d~lviAtG--~~p~~p~ipG~~~~~v--~ 131 (565)
T 3ntd_A 62 QTPESFKARFNVEVRVKHEVVAIDRAA--KLVTVRRLL-DG---SEYQESYDTLLLSPG--AAPIVPPIPGVDNPLT--H 131 (565)
T ss_dssp CCHHHHHHHHCCEEETTEEEEEEETTT--TEEEEEETT-TC---CEEEEECSEEEECCC--EEECCCCCTTCCSTTE--E
T ss_pred cCHHHHHHhcCcEEEECCEEEEEECCC--CEEEEEecC-CC---CeEEEECCEEEECCC--CCCCCCCCCCCCCCCE--E
Confidence 455566667799999999999998765 665444321 11 335899999999999 7888888998754321 2
Q ss_pred ecCCCC--CC-----CCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHhhccHH
Q 014522 179 HACDYK--SG-----EKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPLW 251 (423)
Q Consensus 179 ~~~~~~--~~-----~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (423)
+..... .. ....+++++|||+|.+|+|+|..|++.|.+|+++.|.+ .++|.... ++
T Consensus 132 ~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~-----~~----------- 194 (565)
T 3ntd_A 132 SLRNIPDMDRILQTIQMNNVEHATVVGGGFIGLEMMESLHHLGIKTTLLELAD-QVMTPVDR-----EM----------- 194 (565)
T ss_dssp CCSSHHHHHHHHHHHHHTTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSCTTSCH-----HH-----------
T ss_pred EeCCHHHHHHHHHHHhhCCCCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCC-ccchhcCH-----HH-----------
Confidence 221111 10 11347899999999999999999999999999999998 45453321 11
Q ss_pred HHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeC------------
Q 014522 252 LVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISC------------ 317 (423)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~------------ 317 (423)
...+.+.+++.+|+++.+ +.++..
T Consensus 195 ------------------------------------------~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~ 232 (565)
T 3ntd_A 195 ------------------------------------------AGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAG 232 (565)
T ss_dssp ------------------------------------------HHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGT
T ss_pred ------------------------------------------HHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccc
Confidence 111234455667888765 666653
Q ss_pred --------C---eEEEccCcEecccEEEEcCCCCCCCCCccccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccc----
Q 014522 318 --------G---QAELINGEKLDIDAIVLATGYRSNVPSWLQESEF-FSENGFPKAPFPHGWKGNAGLYAVGFTRR---- 381 (423)
Q Consensus 318 --------~---~v~~~~g~~~~~D~vi~a~G~~~~~~~ll~~~~~-~~~~g~~~~~~~~~~~~~~~vya~Gd~~~---- 381 (423)
+ .+++.+|+++++|.||+|+|++|++ .+++..++ .+++|++.+| .+++|+.|+|||+|||+.
T Consensus 233 ~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~-~l~~~~g~~~~~~g~i~vd-~~~~t~~~~IyA~GD~~~~~~~ 310 (565)
T 3ntd_A 233 EDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRPET-QLARDAGLAIGELGGIKVN-AMMQTSDPAIYAVGDAVEEQDF 310 (565)
T ss_dssp CCCTTCCTTCEEEEEETTSCEEEESEEEECSCEEECC-HHHHHHTCCBCTTSSBCCC-TTCBCSSTTEEECGGGBCEEBT
T ss_pred cccccccCCCcEEEEEcCCCEEEcCEEEECcCCccch-HHHHhCCcccCCCCCEEEC-CCcccCCCCEEEeeeeEeeccc
Confidence 2 2566788999999999999999998 57777787 5678999999 588899999999999973
Q ss_pred ---cC------CCcchhHHHHHHHHhhh
Q 014522 382 ---GL------SGASSDAMRIAQDIGKV 400 (423)
Q Consensus 382 ---~~------~~a~~~g~~~a~~i~~~ 400 (423)
.. ..|..||+.+|.+|.+.
T Consensus 311 ~~g~~~~~~~~~~A~~~g~~aa~~i~g~ 338 (565)
T 3ntd_A 311 VTGQACLVPLAGPANRQGRMAADNMFGR 338 (565)
T ss_dssp TTCCEECCCCHHHHHHHHHHHHHHHTTC
T ss_pred cCCceeecccHHHHHHHHHHHHHHhcCC
Confidence 11 15889999999999864
No 44
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=100.00 E-value=6.4e-34 Score=280.34 Aligned_cols=306 Identities=16% Similarity=0.135 Sum_probs=205.6
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCcee-ecCC----------CccccCCC-CCCCCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLN-LHLP----------KQFCQLPK-LQFPED 87 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~-~~~~----------~~~~~~~~-~~~~~~ 87 (423)
+++||+|||||++|+++|..|++.|.+|+|||+.+.+||+|....+.... +... ...+.++. .....+
T Consensus 1 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 80 (468)
T 2qae_A 1 NPYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMD 80 (468)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEEC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCccC
Confidence 35799999999999999999999999999999998899987542110000 0000 00001100 000000
Q ss_pred CCCCC-CH----HHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCC
Q 014522 88 FPEYP-TK----RQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAER 162 (423)
Q Consensus 88 ~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~ 162 (423)
+..+. .. ..+...+...+++.+++++.++.+ .+ +. ..+.|.+.+ +....+.||+||+||| +.|
T Consensus 81 ~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~-~i--~~--~~~~v~~~~-----G~~~~~~~d~lviAtG--~~p 148 (468)
T 2qae_A 81 SAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGS-FE--TA--HSIRVNGLD-----GKQEMLETKKTIIATG--SEP 148 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEE-EE--ET--TEEEEEETT-----SCEEEEEEEEEEECCC--EEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEE-Ee--eC--CEEEEEecC-----CceEEEEcCEEEECCC--CCc
Confidence 00000 01 112223455666778888777644 23 33 566666644 1226799999999999 788
Q ss_pred cCCCCCCCCCCCceeeecCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHH
Q 014522 163 VMPDIEGLADFGGEVIHACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELAT 242 (423)
Q Consensus 163 ~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~ 242 (423)
..|.++|.+.. .+++..+... ....+++++|||+|.+|+|+|..|++.|.+|+++.|.+ .++|..+.
T Consensus 149 ~~p~~~g~~~~--~v~t~~~~~~-~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~--------- 215 (468)
T 2qae_A 149 TELPFLPFDEK--VVLSSTGALA-LPRVPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAP-RCAPTLDE--------- 215 (468)
T ss_dssp CCBTTBCCCSS--SEECHHHHHT-CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCH---------
T ss_pred CCCCCCCCCcC--ceechHHHhh-cccCCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCC-cccccCCH---------
Confidence 88888876532 2333333222 22357899999999999999999999999999999998 45453321
Q ss_pred HHHhhccHHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhh-hcCCeEEecC--ceEEeCCe
Q 014522 243 LMMKWLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKI-RSGHINVVPG--IKRISCGQ 319 (423)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~--i~~~~~~~ 319 (423)
.....+.+.+ ++.+|+++.+ +.++..++
T Consensus 216 -------------------------------------------------~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~ 246 (468)
T 2qae_A 216 -------------------------------------------------DVTNALVGALAKNEKMKFMTSTKVVGGTNNG 246 (468)
T ss_dssp -------------------------------------------------HHHHHHHHHHHHHTCCEEECSCEEEEEEECS
T ss_pred -------------------------------------------------HHHHHHHHHHhhcCCcEEEeCCEEEEEEEcC
Confidence 1111234445 6678998876 77776432
Q ss_pred ----EEEc--cC--cEecccEEEEcCCCCCCCCCc-cccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccc-cCC---C
Q 014522 320 ----AELI--NG--EKLDIDAIVLATGYRSNVPSW-LQESEF-FSENGFPKAPFPHGWKGNAGLYAVGFTRR-GLS---G 385 (423)
Q Consensus 320 ----v~~~--~g--~~~~~D~vi~a~G~~~~~~~l-l~~~~~-~~~~g~~~~~~~~~~~~~~~vya~Gd~~~-~~~---~ 385 (423)
+.++ +| +++++|.||+|+|++|++..+ ++.+++ .+++|++.+| .+++|+.|+|||+|||+. .+. .
T Consensus 247 ~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~~ 325 (468)
T 2qae_A 247 DSVSLEVEGKNGKRETVTCEALLVSVGRRPFTGGLGLDKINVAKNERGFVKIG-DHFETSIPDVYAIGDVVDKGPMLAHK 325 (468)
T ss_dssp SSEEEEEECC---EEEEEESEEEECSCEEECCTTSCHHHHTCCBCTTSCBCCC-TTSBCSSTTEEECGGGBSSSCSCHHH
T ss_pred CeEEEEEEcCCCceEEEECCEEEECCCcccCCCCCCchhcCCccCCCCCEeEC-CCcccCCCCEEEeeccCCCCCccHhH
Confidence 4444 66 689999999999999998333 567777 4567999998 578899999999999998 544 6
Q ss_pred cchhHHHHHHHHhhh
Q 014522 386 ASSDAMRIAQDIGKV 400 (423)
Q Consensus 386 a~~~g~~~a~~i~~~ 400 (423)
|..||+.+|.+|.+.
T Consensus 326 A~~~g~~aa~~i~~~ 340 (468)
T 2qae_A 326 AEDEGVACAEILAGK 340 (468)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCC
Confidence 899999999999863
No 45
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=6e-33 Score=273.03 Aligned_cols=297 Identities=16% Similarity=0.188 Sum_probs=199.1
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccC-Cceee-cCCC---ccccCCCCCCCCCCCCCC-CH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTY-DRLNL-HLPK---QFCQLPKLQFPEDFPEYP-TK 94 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~-~~~~~-~~~~---~~~~~~~~~~~~~~~~~~-~~ 94 (423)
.+||+|||||++|+++|..|++.|.+|+|||+++.+||+|....+ +...+ .... ...........-++..+. ..
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQDRK 83 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHHHHH
Confidence 589999999999999999999999999999999999998865211 10000 0000 000000000000100000 11
Q ss_pred HHHH-----HHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEE--EEeCEEEEccCCCCCCcCCCC
Q 014522 95 RQFI-----QYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFE--YICRWLVVATGENAERVMPDI 167 (423)
Q Consensus 95 ~~~~-----~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~--~~~d~vviAtG~~~~~~~p~~ 167 (423)
..+. .++...+++.+++++.+ ++..++ . ..+.|.+.+ + .. +.||+||+||| +.|..|.+
T Consensus 84 ~~~~~l~~~~~~~~~~~~~~v~~~~g-~v~~id--~--~~~~V~~~~------g-~~~~~~~d~lviAtG--~~p~~p~i 149 (466)
T 3l8k_A 84 DYVQELRFKQHKRNMSQYETLTFYKG-YVKIKD--P--THVIVKTDE------G-KEIEAETRYMIIASG--AETAKLRL 149 (466)
T ss_dssp HHHHHHHHHHHHHHHTTCTTEEEESE-EEEEEE--T--TEEEEEETT------S-CEEEEEEEEEEECCC--EEECCCCC
T ss_pred HhheeccccchHHHHHHhCCCEEEEe-EEEEec--C--CeEEEEcCC------C-cEEEEecCEEEECCC--CCccCCCC
Confidence 1111 33333444456665555 566554 3 566677664 3 34 99999999999 78888889
Q ss_pred CCCCCCCceeeecCCC---CCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeeccc-ccCCChHHHHHH
Q 014522 168 EGLADFGGEVIHACDY---KSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPRE-ILGKSTFELATL 243 (423)
Q Consensus 168 ~g~~~~~~~~~~~~~~---~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~-~~~~~~~~~~~~ 243 (423)
||.+. +++..+. .......+++++|||+|.+|+|+|..|++.|.+|+++.|.+ .+++.. +. ++...
T Consensus 150 ~G~~~----~~t~~~~~~~~~~l~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~d~-----~~~~~ 219 (466)
T 3l8k_A 150 PGVEY----CLTSDDIFGYKTSFRKLPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLD-RALITLEDQ-----DIVNT 219 (466)
T ss_dssp TTGGG----SBCHHHHHSTTCSCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSCTTSCCH-----HHHHH
T ss_pred CCccc----eEeHHHHHHHHHHHhhCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCC-cCCCCCCCH-----HHHHH
Confidence 98762 1222211 11233457899999999999999999999999999999998 454543 21 11111
Q ss_pred HHhhccHHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeC---C
Q 014522 244 MMKWLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISC---G 318 (423)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~---~ 318 (423)
+.+.++ |+++.+ +.++.. +
T Consensus 220 -----------------------------------------------------l~~~l~---v~i~~~~~v~~i~~~~~~ 243 (466)
T 3l8k_A 220 -----------------------------------------------------LLSILK---LNIKFNSPVTEVKKIKDD 243 (466)
T ss_dssp -----------------------------------------------------HHHHHC---CCEECSCCEEEEEEEETT
T ss_pred -----------------------------------------------------HHhcCE---EEEEECCEEEEEEEcCCC
Confidence 112221 666655 666654 3
Q ss_pred e--EEEc--cCc--EecccEEEEcCCCCCCCCCc-cccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccCC---Ccc
Q 014522 319 Q--AELI--NGE--KLDIDAIVLATGYRSNVPSW-LQESEF-FSENGFPKAPFPHGWKGNAGLYAVGFTRRGLS---GAS 387 (423)
Q Consensus 319 ~--v~~~--~g~--~~~~D~vi~a~G~~~~~~~l-l~~~~~-~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~---~a~ 387 (423)
+ +.++ +|+ ++++|.||+|+|++|++. + ++..++ .+++| +.+| ++++|+.|+|||+|||+..+. .|.
T Consensus 244 ~v~v~~~~~~G~~~~i~~D~vi~a~G~~p~~~-l~l~~~gl~~~~~G-i~vd-~~~~t~~~~Iya~GD~~~~~~~~~~A~ 320 (466)
T 3l8k_A 244 EYEVIYSTKDGSKKSIFTNSVVLAAGRRPVIP-EGAREIGLSISKTG-IVVD-ETMKTNIPNVFATGDANGLAPYYHAAV 320 (466)
T ss_dssp EEEEEECCTTSCCEEEEESCEEECCCEEECCC-TTTGGGTCCBCSSS-BCCC-TTCBCSSTTEEECGGGTCSCCSHHHHH
T ss_pred cEEEEEEecCCceEEEEcCEEEECcCCCcccc-cchhhcCceeCCCC-EeEC-CCccCCCCCEEEEEecCCCCccHhHHH
Confidence 3 5565 566 899999999999999985 6 788888 56789 8888 688899999999999998543 689
Q ss_pred hhHHHHHHHHhhh
Q 014522 388 SDAMRIAQDIGKV 400 (423)
Q Consensus 388 ~~g~~~a~~i~~~ 400 (423)
.||+.+|.+|.+.
T Consensus 321 ~~g~~aa~~i~~~ 333 (466)
T 3l8k_A 321 RMSIAAANNIMAN 333 (466)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCC
Confidence 9999999999864
No 46
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.3e-32 Score=271.41 Aligned_cols=306 Identities=14% Similarity=0.122 Sum_probs=207.8
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccC-CceeecCC----------CccccCCCCCCCCCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTY-DRLNLHLP----------KQFCQLPKLQFPEDF 88 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~-~~~~~~~~----------~~~~~~~~~~~~~~~ 88 (423)
.++||+|||||++|+++|..|++.|.+|+|||+.+.+||.|....+ +...+... ...+.+.......++
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 84 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEIDL 84 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEECH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCccCH
Confidence 4689999999999999999999999999999999889998754211 00000000 000000000000000
Q ss_pred CCCC-C----HHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCc
Q 014522 89 PEYP-T----KRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERV 163 (423)
Q Consensus 89 ~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~ 163 (423)
..+. . ...+...+...+++.+++++.++.+. + +. ..+.|.+.+ ++...++||+||+||| +.|.
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~--~~--~~~~v~~~~-----G~~~~i~~d~lIiAtG--s~p~ 152 (470)
T 1dxl_A 85 AAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKF-V--SP--SEISVDTIE-----GENTVVKGKHIIIATG--SDVK 152 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEE-E--ET--TEEEECCSS-----SCCEEEECSEEEECCC--EEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-e--cC--CEEEEEeCC-----CceEEEEcCEEEECCC--CCCC
Confidence 0000 1 11233334556667789988887553 3 33 565565443 1226799999999999 7888
Q ss_pred CCCCCCCCCCCceeeecCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHH
Q 014522 164 MPDIEGLADFGGEVIHACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATL 243 (423)
Q Consensus 164 ~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~ 243 (423)
.|.++|.+.. .+++..+... ....+++++|||+|.+|+|+|..|++.|.+|+++.+.+ .++|..+. +
T Consensus 153 ~p~~~g~~~~--~v~~~~~~~~-~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~-~~l~~~~~-----~---- 219 (470)
T 1dxl_A 153 SLPGVTIDEK--KIVSSTGALA-LSEIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFAS-EIVPTMDA-----E---- 219 (470)
T ss_dssp CBTTBCCCSS--SEECHHHHTT-CSSCCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSS-SSSTTSCH-----H----
T ss_pred CCCCCCCCcc--cEEeHHHhhh-hhhcCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC-cccccccH-----H----
Confidence 8888876431 2333333322 22357899999999999999999999999999999998 45453321 1
Q ss_pred HHhhccHHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeCCe--
Q 014522 244 MMKWLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISCGQ-- 319 (423)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~~-- 319 (423)
+...+.+.+++.+|+++.+ +.++..++
T Consensus 220 -------------------------------------------------~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~ 250 (470)
T 1dxl_A 220 -------------------------------------------------IRKQFQRSLEKQGMKFKLKTKVVGVDTSGDG 250 (470)
T ss_dssp -------------------------------------------------HHHHHHHHHHHSSCCEECSEEEEEEECSSSS
T ss_pred -------------------------------------------------HHHHHHHHHHHcCCEEEeCCEEEEEEEcCCe
Confidence 1112344456678888877 77777542
Q ss_pred --EEEc---cC--cEecccEEEEcCCCCCCCCCc-cccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccCC---Ccc
Q 014522 320 --AELI---NG--EKLDIDAIVLATGYRSNVPSW-LQESEF-FSENGFPKAPFPHGWKGNAGLYAVGFTRRGLS---GAS 387 (423)
Q Consensus 320 --v~~~---~g--~~~~~D~vi~a~G~~~~~~~l-l~~~~~-~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~---~a~ 387 (423)
+.+. +| +++++|.||+|+|++|++..+ ++.+++ .+++|++.+| ++++|+.|+|||+|||+.... .|.
T Consensus 251 ~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~~A~ 329 (470)
T 1dxl_A 251 VKLTVEPSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKLGRILVN-ERFSTNVSGVYAIGDVIPGPMLAHKAE 329 (470)
T ss_dssp EEEEEEESSSCCCEEEEESEEECCCCEEECCTTSCCTTTTCCBCSSSCBCCC-TTCBCSSTTEEECSTTSSSCCCHHHHH
T ss_pred EEEEEEecCCCcceEEECCEEEECCCCCcCCCCCCchhcCCccCCCCCEeEC-cCCccCCCCEEEEeccCCCCccHHHHH
Confidence 3443 45 689999999999999998433 677787 4567999998 578899999999999987544 689
Q ss_pred hhHHHHHHHHhhh
Q 014522 388 SDAMRIAQDIGKV 400 (423)
Q Consensus 388 ~~g~~~a~~i~~~ 400 (423)
.||+.+|.+|.+.
T Consensus 330 ~~g~~aa~~i~g~ 342 (470)
T 1dxl_A 330 EDGVACVEYLAGK 342 (470)
T ss_dssp HHHHHHHHHHTTS
T ss_pred HHHHHHHHHHcCC
Confidence 9999999999863
No 47
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=100.00 E-value=2.9e-33 Score=276.43 Aligned_cols=303 Identities=16% Similarity=0.138 Sum_probs=203.6
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccC-Cceee-cCC---C--ccccCCCCCCCCCCCCCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTY-DRLNL-HLP---K--QFCQLPKLQFPEDFPEYP 92 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~-~~~~~-~~~---~--~~~~~~~~~~~~~~~~~~ 92 (423)
+.+||+|||||++|+++|..|++.|.+|+|||+.+.+||.|....+ +...+ ... . ........++.. ...
T Consensus 5 ~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~---~~~ 81 (482)
T 1ojt_A 5 AEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPE---PEL 81 (482)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCC---CCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCC---Ccc
Confidence 3679999999999999999999999999999998888887643211 10000 000 0 000000111100 001
Q ss_pred CHHHH-----------HHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEccc-------CCCCCceEEEEeCEEEE
Q 014522 93 TKRQF-----------IQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASS-------AGSTKTEFEYICRWLVV 154 (423)
Q Consensus 93 ~~~~~-----------~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~-------~~~~~~~~~~~~d~vvi 154 (423)
....+ ...+...+++.+++++.++.+. .+. +.+.+.+.+. .+ +...+++||+||+
T Consensus 82 ~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~---~~~--~~v~v~~~~g~~~~~~~~~--g~~~~i~ad~lVi 154 (482)
T 1ojt_A 82 DIDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQF---LDP--HHLEVSLTAGDAYEQAAPT--GEKKIVAFKNCII 154 (482)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEE---EET--TEEEEEEEEEEETTEEEEE--EEEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEE---ccC--CEEEEEecCCccccccccc--CcceEEEcCEEEE
Confidence 12222 2224455667788887776543 223 5655654330 00 0125799999999
Q ss_pred ccCCCCCCcCCC-CCCCCCCCceeeecCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeeccccc
Q 014522 155 ATGENAERVMPD-IEGLADFGGEVIHACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREIL 233 (423)
Q Consensus 155 AtG~~~~~~~p~-~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~ 233 (423)
||| +.|..|. ++ .+. .+++..+... ....+++++|||+|.+|+|+|..|++.|.+|+++.+.+ .++|..+.
T Consensus 155 AtG--s~p~~~~~i~-~~~---~v~~~~~~~~-~~~~~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~-~~l~~~~~ 226 (482)
T 1ojt_A 155 AAG--SRVTKLPFIP-EDP---RIIDSSGALA-LKEVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMD-GLMQGADR 226 (482)
T ss_dssp CCC--EEECCCSSCC-CCT---TEECHHHHTT-CCCCCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSS-SSSTTSCH
T ss_pred CCC--CCCCCCCCCC-ccC---cEEcHHHHhc-ccccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECC-ccccccCH
Confidence 999 6676665 44 221 2333333222 22347899999999999999999999999999999998 45453321
Q ss_pred CCChHHHHHHHHhhccHHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--
Q 014522 234 GKSTFELATLMMKWLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG-- 311 (423)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-- 311 (423)
.....+.+.+++.+|+++.+
T Consensus 227 ----------------------------------------------------------~~~~~l~~~l~~~gV~i~~~~~ 248 (482)
T 1ojt_A 227 ----------------------------------------------------------DLVKVWQKQNEYRFDNIMVNTK 248 (482)
T ss_dssp ----------------------------------------------------------HHHHHHHHHHGGGEEEEECSCE
T ss_pred ----------------------------------------------------------HHHHHHHHHHHhcCCEEEECCE
Confidence 11122344456678999887
Q ss_pred ceEEeCC----eEEEcc----CcEecccEEEEcCCCCCCCCCc-cccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccc
Q 014522 312 IKRISCG----QAELIN----GEKLDIDAIVLATGYRSNVPSW-LQESEF-FSENGFPKAPFPHGWKGNAGLYAVGFTRR 381 (423)
Q Consensus 312 i~~~~~~----~v~~~~----g~~~~~D~vi~a~G~~~~~~~l-l~~~~~-~~~~g~~~~~~~~~~~~~~~vya~Gd~~~ 381 (423)
+.++..+ .+.+.+ |+++++|.||+|+|++|++..+ ++.+++ .+++|++.+| .+++|+.|+|||+|||+.
T Consensus 249 v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~ 327 (482)
T 1ojt_A 249 TVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNGKLISAEKAGVAVTDRGFIEVD-KQMRTNVPHIYAIGDIVG 327 (482)
T ss_dssp EEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCEEECGGGTTGGGTTCCCCTTSCCCCC-TTSBCSSTTEEECGGGTC
T ss_pred EEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCCCcCCCCCChhhcCceeCCCCCEeeC-CCcccCCCCEEEEEcccC
Confidence 7777643 266666 7789999999999999998434 677787 4567999999 588999999999999997
Q ss_pred cCC---CcchhHHHHHHHHhh
Q 014522 382 GLS---GASSDAMRIAQDIGK 399 (423)
Q Consensus 382 ~~~---~a~~~g~~~a~~i~~ 399 (423)
... .|..||+.+|.+|.+
T Consensus 328 ~~~l~~~A~~~g~~aa~~i~g 348 (482)
T 1ojt_A 328 QPMLAHKAVHEGHVAAENCAG 348 (482)
T ss_dssp SSCCHHHHHHHHHHHHHHHTT
T ss_pred CCccHHHHHHHHHHHHHHHcC
Confidence 543 689999999999986
No 48
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=4.2e-33 Score=269.39 Aligned_cols=281 Identities=19% Similarity=0.190 Sum_probs=199.5
Q ss_pred cccCCeEEECCChHHHHHHHHHHHcCC--CEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHH
Q 014522 19 IWVNGPVIVGAGPSGLATAACLRDQGV--PFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQ 96 (423)
Q Consensus 19 ~~~~~vvIIGaG~aGl~~A~~L~~~g~--~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (423)
++.+||+|||||++|+++|..|++.|. +|+|||+.+..+. ....+ +..+..-.. ++..
T Consensus 5 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~-------~~~~~--~~~~~~~~~---~~~~-------- 64 (408)
T 2gqw_A 5 ALKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPY-------DRPPL--SKDFMAHGD---AEKI-------- 64 (408)
T ss_dssp -CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCB-------CSGGG--GTHHHHHCC---GGGS--------
T ss_pred CCCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcc-------cCCCC--CHHHhCCCc---hhhh--------
Confidence 357899999999999999999999997 5999999875431 10000 000000000 0000
Q ss_pred HHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCC-CCCCCCCc
Q 014522 97 FIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDI-EGLADFGG 175 (423)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~-~g~~~~~~ 175 (423)
++. .+.+.+++++.+++|+.++... . .|++.+ + .++.||+||+||| +.|..|.+ ||.+ .+
T Consensus 65 ---~~~-~~~~~~v~~~~~~~v~~i~~~~--~--~v~~~~------g-~~~~~d~lviAtG--~~~~~~~i~~G~~--~~ 125 (408)
T 2gqw_A 65 ---RLD-CKRAPEVEWLLGVTAQSFDPQA--H--TVALSD------G-RTLPYGTLVLATG--AAPRALPTLQGAT--MP 125 (408)
T ss_dssp ---BCC-CTTSCSCEEEETCCEEEEETTT--T--EEEETT------S-CEEECSEEEECCC--EEECCCGGGTTCS--SC
T ss_pred ---hHH-HHHHCCCEEEcCCEEEEEECCC--C--EEEECC------C-CEEECCEEEECCC--CCCCCCCccCCCC--Cc
Confidence 000 2234588888999999887543 3 377765 4 5899999999999 78888888 8875 22
Q ss_pred eeeecCCC-----CCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHhhccH
Q 014522 176 EVIHACDY-----KSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPL 250 (423)
Q Consensus 176 ~~~~~~~~-----~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (423)
+++.... .......+++++|||+|.+|+|+|..|++.|.+|+++.+.+ .+++...
T Consensus 126 -v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~------------------ 185 (408)
T 2gqw_A 126 -VHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLELAATARTAGVHVSLVETQP-RLMSRAA------------------ 185 (408)
T ss_dssp -EEECCSHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSSTTTS------------------
T ss_pred -EEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCC-ccccccc------------------
Confidence 2222111 11112347899999999999999999999999999999998 4444211
Q ss_pred HHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeCCeEEEccCcEe
Q 014522 251 WLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISCGQAELINGEKL 328 (423)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~~v~~~~g~~~ 328 (423)
.+.....+.+.+++.+|+++.+ +.++..+.+++++|+++
T Consensus 186 ---------------------------------------~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~v~~~~g~~i 226 (408)
T 2gqw_A 186 ---------------------------------------PATLADFVARYHAAQGVDLRFERSVTGSVDGVVLLDDGTRI 226 (408)
T ss_dssp ---------------------------------------CHHHHHHHHHHHHHTTCEEEESCCEEEEETTEEEETTSCEE
T ss_pred ---------------------------------------CHHHHHHHHHHHHHcCcEEEeCCEEEEEECCEEEECCCCEE
Confidence 0111112344456678998876 77777557888999999
Q ss_pred cccEEEEcCCCCCCCCCcccccccccCCCCCCCCCCCCCCCCCceEEEeeccccC-------------CCcchhHHHHHH
Q 014522 329 DIDAIVLATGYRSNVPSWLQESEFFSENGFPKAPFPHGWKGNAGLYAVGFTRRGL-------------SGASSDAMRIAQ 395 (423)
Q Consensus 329 ~~D~vi~a~G~~~~~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~-------------~~a~~~g~~~a~ 395 (423)
++|.||+|+|++|++ .+++.+++..++| +.+| ++++|+.|+|||+|||+... ..|..||+.+|.
T Consensus 227 ~~D~vi~a~G~~p~~-~l~~~~gl~~~~g-i~Vd-~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~ 303 (408)
T 2gqw_A 227 AADMVVVGIGVLAND-ALARAAGLACDDG-IFVD-AYGRTTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVAR 303 (408)
T ss_dssp ECSEEEECSCEEECC-HHHHHHTCCBSSS-EECC-TTCBCSSTTEEECGGGEEEEETTTTEEECCCCHHHHHHHHHHHHH
T ss_pred EcCEEEECcCCCccH-HHHHhCCCCCCCC-EEEC-CCCccCCCCEEEEEEEEEecCccCCceeeccHHHHHHHHHHHHHH
Confidence 999999999999998 6788878755567 7777 57889999999999998642 158899999999
Q ss_pred HHhhh
Q 014522 396 DIGKV 400 (423)
Q Consensus 396 ~i~~~ 400 (423)
+|.+.
T Consensus 304 ~i~g~ 308 (408)
T 2gqw_A 304 HLVDP 308 (408)
T ss_dssp HHHCT
T ss_pred HhcCC
Confidence 99865
No 49
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=7.6e-33 Score=274.44 Aligned_cols=302 Identities=15% Similarity=0.176 Sum_probs=196.4
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccC-Cceeec--------C-CCccccCCCCCCCCCCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTY-DRLNLH--------L-PKQFCQLPKLQFPEDFP 89 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~-~~~~~~--------~-~~~~~~~~~~~~~~~~~ 89 (423)
|++||+|||||++|+++|..|++.|.+|+|||+. ..||+|....+ +...+. . ....+.+.... ..+++
T Consensus 1 m~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~~-~~~~~ 78 (500)
T 1onf_A 1 MVYDLIVIGGGSGGMAAARRAARHNAKVALVEKS-RLGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTKF-SFNLP 78 (500)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCCC-CCCHH
T ss_pred CccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCC-CcCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccCC-ccCHH
Confidence 4689999999999999999999999999999998 47888754211 110000 0 00001111100 00111
Q ss_pred CCCC-H----HHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEc-------ccCCCCCceEEEEeCEEEEccC
Q 014522 90 EYPT-K----RQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTA-------SSAGSTKTEFEYICRWLVVATG 157 (423)
Q Consensus 90 ~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~-------~~~~~~~~~~~~~~d~vviAtG 157 (423)
.+.. . ..+...+...+++.+++++.++. ..++. ..+.+... ...+ +...+.||+||+|||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~-~~id~----~~v~v~~~~~~~~~~~~~~---~~~~~~~d~lViAtG 150 (500)
T 1onf_A 79 LLVERRDKYIQRLNNIYRQNLSKDKVDLYEGTA-SFLSE----NRILIKGTKDNNNKDNGPL---NEEILEGRNILIAVG 150 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCC-CCC---------------------------------CBSSEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEE-EEeeC----CEEEEEeccccccccccCC---CceEEEeCEEEECCC
Confidence 0000 0 22223344555677888776653 22321 23223210 0000 125799999999999
Q ss_pred CCCCCcCCCCCCCCCCCceeeecCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCCh
Q 014522 158 ENAERVMPDIEGLADFGGEVIHACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKST 237 (423)
Q Consensus 158 ~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~ 237 (423)
+.|..|.+||.+. .+++.+...... +++++|||+|.+|+|+|..|++.|.+|+++.|.+ .++|..+.
T Consensus 151 --s~p~~p~i~G~~~----~~~~~~~~~~~~--~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~---- 217 (500)
T 1onf_A 151 --NKPVFPPVKGIEN----TISSDEFFNIKE--SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGN-RILRKFDE---- 217 (500)
T ss_dssp --CCBCCCSCTTGGG----CEEHHHHTTCCC--CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSS-SSCTTSCH----
T ss_pred --CCCCCCCCCCCCc----ccCHHHHhccCC--CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCC-ccCcccch----
Confidence 7888888888742 233333332222 7899999999999999999999999999999988 45453321
Q ss_pred HHHHHHHHhhccHHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEE
Q 014522 238 FELATLMMKWLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRI 315 (423)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~ 315 (423)
.....+.+.+++.+|+++++ +.++
T Consensus 218 ------------------------------------------------------~~~~~l~~~l~~~gv~i~~~~~v~~i 243 (500)
T 1onf_A 218 ------------------------------------------------------SVINVLENDMKKNNINIVTFADVVEI 243 (500)
T ss_dssp ------------------------------------------------------HHHHHHHHHHHHTTCEEECSCCEEEE
T ss_pred ------------------------------------------------------hhHHHHHHHHHhCCCEEEECCEEEEE
Confidence 11122344566778999877 7777
Q ss_pred eCC-----eEEEccCcE-ecccEEEEcCCCCCCCCCc-ccccccccCCCCCCCCCCCCCCCCCceEEEeecc--------
Q 014522 316 SCG-----QAELINGEK-LDIDAIVLATGYRSNVPSW-LQESEFFSENGFPKAPFPHGWKGNAGLYAVGFTR-------- 380 (423)
Q Consensus 316 ~~~-----~v~~~~g~~-~~~D~vi~a~G~~~~~~~l-l~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~-------- 380 (423)
..+ .+.+++|++ +++|.||+|+|++|++..| ++.+++..++|++.+| ++++|+.|+|||+|||+
T Consensus 244 ~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~G~i~vd-~~~~t~~~~iya~GD~~~~~~~~~~ 322 (500)
T 1onf_A 244 KKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDTENLKLEKLNVETNNNYIVVD-ENQRTSVNNIYAVGDCCMVKKSKEI 322 (500)
T ss_dssp EESSTTCEEEEETTSCEEEEESEEEECCCBCCTTTTSSCTTTTCCBSSSCEEEC-TTCBCSSSSEEECSTTEEEC-----
T ss_pred EEcCCceEEEEECCCcEEEECCEEEECCCCCcCCCCCCchhcCccccCCEEEEC-CCcccCCCCEEEEeccccccccccc
Confidence 642 366788888 9999999999999998545 6788874478999888 57889999999999998
Q ss_pred --------------------------ccCC---CcchhHHHHHHHHhh
Q 014522 381 --------------------------RGLS---GASSDAMRIAQDIGK 399 (423)
Q Consensus 381 --------------------------~~~~---~a~~~g~~~a~~i~~ 399 (423)
..+. .|.+||+.+|.+|.+
T Consensus 323 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g 370 (500)
T 1onf_A 323 EDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFL 370 (500)
T ss_dssp -------------------------CBCCCCHHHHHHHHHHHHHHHHS
T ss_pred cccccccccccccccccccccccccCCcccchhHHHHHHHHHHHHHhC
Confidence 2222 589999999999986
No 50
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=100.00 E-value=5e-33 Score=274.92 Aligned_cols=303 Identities=15% Similarity=0.123 Sum_probs=203.2
Q ss_pred ccCCeEEECCChHHHHHHHHHHH-cCCCEEEEe--------cCCCCCccccccc-CCceeecCCCc----cccCCCCCCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRD-QGVPFVMLE--------RAECIASLWQKRT-YDRLNLHLPKQ----FCQLPKLQFP 85 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~-~g~~v~lie--------~~~~~gg~~~~~~-~~~~~~~~~~~----~~~~~~~~~~ 85 (423)
.++||+|||||++|+++|..|++ .|.+|+||| +...+||+|.... .+...+..... ......+.+.
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~ 81 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWE 81 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEE
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCcc
Confidence 36799999999999999999999 999999999 3567788765421 11100000000 0000000000
Q ss_pred CCCC-CCCCHHHH-----------HHHHHHHHHHc-CCceeccceEEEEEEeCCCCeEEEEEccc--CCCCCc--eEEEE
Q 014522 86 EDFP-EYPTKRQF-----------IQYLESYAEKF-EINPRFNECVQSARYDETSGLWRVKTASS--AGSTKT--EFEYI 148 (423)
Q Consensus 86 ~~~~-~~~~~~~~-----------~~~~~~~~~~~-~~~~~~~~~v~~v~~~~~~~~~~v~~~~~--~~~~~~--~~~~~ 148 (423)
.... .......+ ...+...+++. +++++.++ +..++ . .. +.+... .+ + ...+.
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~-~~~i~--~--~~--v~v~~~~~~~---g~~~~~~~ 151 (490)
T 1fec_A 82 LDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGF-GALQD--N--HT--VLVRESADPN---SAVLETLD 151 (490)
T ss_dssp CCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEESE-EEEEE--T--TE--EEEESSSSTT---SCEEEEEE
T ss_pred cCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeE-EEEee--C--CE--EEEEeeccCC---CCceEEEE
Confidence 0000 00111222 22334445566 77776665 55543 2 44 444210 00 3 26899
Q ss_pred eCEEEEccCCCCCCcCCCCCCCCCCCceeeecCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhcc---CCccEEEEecCc
Q 014522 149 CRWLVVATGENAERVMPDIEGLADFGGEVIHACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNH---NASPSMVVRSSV 225 (423)
Q Consensus 149 ~d~vviAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~---g~~V~~v~r~~~ 225 (423)
||+||+||| +.|..|.+||.+. .++..+... ....+++++|||+|.+|+|+|..|.+. |.+|+++.+.+
T Consensus 152 ~d~lviAtG--s~p~~p~i~g~~~----~~~~~~~~~-~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~- 223 (490)
T 1fec_A 152 TEYILLATG--SWPQHLGIEGDDL----CITSNEAFY-LDEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGD- 223 (490)
T ss_dssp EEEEEECCC--EEECCCCSBTGGG----CBCHHHHTT-CSSCCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSS-
T ss_pred cCEEEEeCC--CCCCCCCCCCccc----eecHHHHhh-hhhcCCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCC-
Confidence 999999999 7888888888632 122222222 223578999999999999999999999 99999999998
Q ss_pred eeecccccCCChHHHHHHHHhhccHHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCC
Q 014522 226 HVLPREILGKSTFELATLMMKWLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGH 305 (423)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (423)
.++|..+. .....+.+.+++.+
T Consensus 224 ~~l~~~d~----------------------------------------------------------~~~~~l~~~l~~~G 245 (490)
T 1fec_A 224 MILRGFDS----------------------------------------------------------ELRKQLTEQLRANG 245 (490)
T ss_dssp SSSTTSCH----------------------------------------------------------HHHHHHHHHHHHTT
T ss_pred CcccccCH----------------------------------------------------------HHHHHHHHHHHhCC
Confidence 45443321 11112344566778
Q ss_pred eEEecC--ceEEeCC-----eEEEccCcEecccEEEEcCCCCCCCCCc-cccccc-ccCCCCCCCCCCCCCCCCCceEEE
Q 014522 306 INVVPG--IKRISCG-----QAELINGEKLDIDAIVLATGYRSNVPSW-LQESEF-FSENGFPKAPFPHGWKGNAGLYAV 376 (423)
Q Consensus 306 i~~~~~--i~~~~~~-----~v~~~~g~~~~~D~vi~a~G~~~~~~~l-l~~~~~-~~~~g~~~~~~~~~~~~~~~vya~ 376 (423)
|+++.+ +.++..+ .+.+.+|+++++|.||+|+|++|++..| ++.+++ .+++|++.+| ++++|+.|+|||+
T Consensus 246 V~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~I~Vd-~~~~t~~~~IyA~ 324 (490)
T 1fec_A 246 INVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRSQTLQLEKAGVEVAKNGAIKVD-AYSKTNVDNIYAI 324 (490)
T ss_dssp EEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCC-TTCBCSSTTEEEC
T ss_pred CEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcCccccCchhcCccCCCCCCEEEC-CCCccCCCCEEEE
Confidence 999877 7777643 3667888899999999999999998545 677788 5568999998 5788999999999
Q ss_pred eeccccCC---CcchhHHHHHHHHhh
Q 014522 377 GFTRRGLS---GASSDAMRIAQDIGK 399 (423)
Q Consensus 377 Gd~~~~~~---~a~~~g~~~a~~i~~ 399 (423)
|||++.+. .|..||+.+|.+|.+
T Consensus 325 GD~~~~~~l~~~A~~~g~~aa~~i~g 350 (490)
T 1fec_A 325 GDVTDRVMLTPVAINEGAAFVDTVFA 350 (490)
T ss_dssp GGGGCSCCCHHHHHHHHHHHHHHHHS
T ss_pred eccCCCccCHHHHHHHHHHHHHHhcC
Confidence 99997543 689999999999986
No 51
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=100.00 E-value=3e-33 Score=272.75 Aligned_cols=278 Identities=19% Similarity=0.202 Sum_probs=195.6
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHH
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQ 99 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (423)
..+||+|||||++|+++|..|++.|++|+|||+.+.+||.|... ++ .+.....+.+
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~g---------------ip---------~~~~~~~~~~ 176 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYG---------------IP---------GFKLEKSVVE 176 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHHT---------------SC---------TTTSCHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeeec---------------CC---------CccCCHHHHH
Confidence 46899999999999999999999999999999999999876431 11 1222345667
Q ss_pred HHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCCCCCCceeee
Q 014522 100 YLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDIEGLADFGGEVIH 179 (423)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~~~~~~~~~~ 179 (423)
+..+.+++.+++++.++.|. .. +++.+ . .+.||+||+|||++ .+..+.+||.+. .+ +++
T Consensus 177 ~~~~~l~~~gv~~~~~~~v~--------~~--v~~~~------~--~~~~d~vvlAtG~~-~~~~~~ipG~~~-~g-v~~ 235 (456)
T 2vdc_G 177 RRVKLLADAGVIYHPNFEVG--------RD--ASLPE------L--RRKHVAVLVATGVY-KARDIKAPGSGL-GN-IVA 235 (456)
T ss_dssp HHHHHHHHTTCEEETTCCBT--------TT--BCHHH------H--HSSCSEEEECCCCC-EECCTTCSCCTT-TT-EEE
T ss_pred HHHHHHHHCCcEEEeCCEec--------cE--EEhhH------h--HhhCCEEEEecCCC-CCCCCCCCCCcC-CC-cEE
Confidence 77778888899988888662 11 33333 2 35699999999952 356667887643 22 111
Q ss_pred c-----------CCCC----C--CCCCCCCEEEEECCCCCHHHHHHHHhccCCc-cEEEEecCceeecccccCCChHHHH
Q 014522 180 A-----------CDYK----S--GEKYKGKKVLVVGCGNSGMELSLDLSNHNAS-PSMVVRSSVHVLPREILGKSTFELA 241 (423)
Q Consensus 180 ~-----------~~~~----~--~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~-V~~v~r~~~~~~~~~~~~~~~~~~~ 241 (423)
. .... . .....+++|+|||+|.+|+|+|..+.+.|.+ |+++.|++...+|.... +
T Consensus 236 a~~~l~~~~~~~~~~~~~~~~~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~~p~~~~-----e-- 308 (456)
T 2vdc_G 236 ALDYLTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKNMPGSQR-----E-- 308 (456)
T ss_dssp HHHHHHHHHHHHCTTTCSSCCTTCSCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCSTTCSSCHH-----H--
T ss_pred HHHHHHHhhhhhcccccccccccccccCCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCccCCCCCHH-----H--
Confidence 1 0000 0 1225689999999999999999999999885 99999988432332210 0
Q ss_pred HHHHhhccHHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeCCe
Q 014522 242 TLMMKWLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISCGQ 319 (423)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~~ 319 (423)
.+.+++.+|+++.+ +.++..++
T Consensus 309 --------------------------------------------------------~~~~~~~Gv~~~~~~~~~~i~~~g 332 (456)
T 2vdc_G 309 --------------------------------------------------------VAHAEEEGVEFIWQAAPEGFTGDT 332 (456)
T ss_dssp --------------------------------------------------------HHHHHHTTCEEECCSSSCCEEEEE
T ss_pred --------------------------------------------------------HHHHHHCCCEEEeCCCceEEeCCC
Confidence 11122334444433 33332111
Q ss_pred ----EEE------------------ccC--cEecccEEEEcCCCCCCCCC-ccccccc-ccCCCCCCCCCCCCCCCCCce
Q 014522 320 ----AEL------------------ING--EKLDIDAIVLATGYRSNVPS-WLQESEF-FSENGFPKAPFPHGWKGNAGL 373 (423)
Q Consensus 320 ----v~~------------------~~g--~~~~~D~vi~a~G~~~~~~~-ll~~~~~-~~~~g~~~~~~~~~~~~~~~v 373 (423)
+.+ .+| .++++|.||+|+|+.|+... +++.+++ .+++|++.+|...++|+.|+|
T Consensus 333 ~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~~~~~l~~~gl~~~~~G~i~vd~~~~~Ts~~~V 412 (456)
T 2vdc_G 333 VVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDLPNAFDEPELKVTRWGTLLVDHRTKMTNMDGV 412 (456)
T ss_dssp EEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHSTTSCBCTTSSBCCCTTTCBCSSTTE
T ss_pred cEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCCCCCcchhhcccCCeeECCCCCEEECCCCCcCCCCCE
Confidence 111 123 47999999999999998633 6777887 577899999954488999999
Q ss_pred EEEeeccccCC---CcchhHHHHHHHHhhhhHHHH
Q 014522 374 YAVGFTRRGLS---GASSDAMRIAQDIGKVWKEET 405 (423)
Q Consensus 374 ya~Gd~~~~~~---~a~~~g~~~a~~i~~~l~~~~ 405 (423)
||+||++.+.. .|+.+|+.+|.+|...|...+
T Consensus 413 fA~GD~~~g~~~v~~A~~~G~~aA~~i~~~L~~~~ 447 (456)
T 2vdc_G 413 FAAGDIVRGASLVVWAIRDGRDAAEGIHAYAKAKA 447 (456)
T ss_dssp EECGGGGSSCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeccccCCchHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 99999987654 699999999999999998754
No 52
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=100.00 E-value=8.5e-33 Score=270.64 Aligned_cols=296 Identities=15% Similarity=0.144 Sum_probs=198.9
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccC-Cceee-cC---------CCccccCCCCCCCCCCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTY-DRLNL-HL---------PKQFCQLPKLQFPEDFP 89 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~-~~~~~-~~---------~~~~~~~~~~~~~~~~~ 89 (423)
++||+|||||++|+++|..|++.|.+|+|||+. ..||+|....+ +...+ .. ....+.+.......++.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~~~~~~~ 82 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQKCALIEAK-ELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFNWE 82 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEEEEECHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC-CCCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCCCccCHH
Confidence 579999999999999999999999999999997 67887753210 00000 00 00000000000000000
Q ss_pred CCC-C----HHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcC
Q 014522 90 EYP-T----KRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 90 ~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~ 164 (423)
.+. . ...+...+...+.+.+++++.++ +..++ . .. |.+ + + ..+.||+||+||| +.|..
T Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~-~~~i~--~--~~--v~~-~------g-~~~~~d~lviAtG--s~p~~ 145 (450)
T 1ges_A 83 TLIASRTAYIDRIHTSYENVLGKNNVDVIKGF-ARFVD--A--KT--LEV-N------G-ETITADHILIATG--GRPSH 145 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESC-CEEEE--T--TE--EEE-T------T-EEEEEEEEEECCC--EEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEec--C--CE--EEE-C------C-EEEEeCEEEECCC--CCCCC
Confidence 000 0 11122233344456688876664 44443 2 33 555 3 4 5899999999999 78888
Q ss_pred CCCCCCCCCCceeeecCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHH
Q 014522 165 PDIEGLADFGGEVIHACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLM 244 (423)
Q Consensus 165 p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~ 244 (423)
|.+||.+. ..+..+... ....+++++|||+|.+|+|+|..|++.|.+|+++.+.+ .+++..+. +
T Consensus 146 p~i~g~~~----~~~~~~~~~-~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~-----~----- 209 (450)
T 1ges_A 146 PDIPGVEY----GIDSDGFFA-LPALPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFD-APLPSFDP-----M----- 209 (450)
T ss_dssp CCSTTGGG----SBCHHHHHH-CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCH-----H-----
T ss_pred CCCCCccc----eecHHHhhh-hhhcCCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCC-chhhhhhH-----H-----
Confidence 88888642 122212111 12347899999999999999999999999999999988 44443221 1
Q ss_pred HhhccHHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeCC----
Q 014522 245 MKWLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISCG---- 318 (423)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~---- 318 (423)
....+.+.+++.+|+++.+ +.++..+
T Consensus 210 ------------------------------------------------~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~ 241 (450)
T 1ges_A 210 ------------------------------------------------ISETLVEVMNAEGPQLHTNAIPKAVVKNTDGS 241 (450)
T ss_dssp ------------------------------------------------HHHHHHHHHHHHSCEEECSCCEEEEEECTTSC
T ss_pred ------------------------------------------------HHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcE
Confidence 1112234455568888876 6777642
Q ss_pred -eEEEccCcEecccEEEEcCCCCCCCCCc-cccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccCC---CcchhHHH
Q 014522 319 -QAELINGEKLDIDAIVLATGYRSNVPSW-LQESEF-FSENGFPKAPFPHGWKGNAGLYAVGFTRRGLS---GASSDAMR 392 (423)
Q Consensus 319 -~v~~~~g~~~~~D~vi~a~G~~~~~~~l-l~~~~~-~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~---~a~~~g~~ 392 (423)
.+.+.+|+++++|.||+|+|++|++..+ ++.+++ .+++|++.+| .+++|+.|+|||+|||+..+. .|..||+.
T Consensus 242 ~~v~~~~g~~i~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~ 320 (450)
T 1ges_A 242 LTLELEDGRSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVD-KYQNTNIEGIYAVGDNTGAVELTPVAVAAGRR 320 (450)
T ss_dssp EEEEETTSCEEEESEEEECSCEEESCTTSCHHHHTCCBCTTSCBCCC-TTSBCSSTTEEECSGGGTSCCCHHHHHHHHHH
T ss_pred EEEEECCCcEEEcCEEEECCCCCcCCCCCCchhcCceECCCCCEeEC-CCCccCCCCEEEEeccCCCCccHHHHHHHHHH
Confidence 3677889899999999999999998545 677787 5668999998 577899999999999987543 68999999
Q ss_pred HHHHHhh
Q 014522 393 IAQDIGK 399 (423)
Q Consensus 393 ~a~~i~~ 399 (423)
+|.+|.+
T Consensus 321 aa~~i~~ 327 (450)
T 1ges_A 321 LSERLFN 327 (450)
T ss_dssp HHHHHHT
T ss_pred HHHHHcC
Confidence 9999986
No 53
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.9e-33 Score=275.17 Aligned_cols=299 Identities=16% Similarity=0.165 Sum_probs=203.0
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccC-Cceee-c-------C-CCccccCCCC-C-CCCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTY-DRLNL-H-------L-PKQFCQLPKL-Q-FPED 87 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~-~~~~~-~-------~-~~~~~~~~~~-~-~~~~ 87 (423)
..+||+|||||++|+++|..|++.|.+|+|||+. ..||+|....+ +...+ . . ....+.+... + .+.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~- 87 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAK-ALGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDKE- 87 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSGG-
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC-CcCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCcccccccccc-
Confidence 3679999999999999999999999999999997 67888753211 10000 0 0 0000111100 0 000
Q ss_pred CCCCCCHHH-----------HHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCc-eEEEEeCEEEEc
Q 014522 88 FPEYPTKRQ-----------FIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKT-EFEYICRWLVVA 155 (423)
Q Consensus 88 ~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~-~~~~~~d~vviA 155 (423)
........ +...+...+++.+++++.++ +..+ +. ..+.+.+.+ + ...+.||+||+|
T Consensus 88 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i--~~--~~~~v~~~~------g~~~~~~~d~lviA 155 (479)
T 2hqm_A 88 -HLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGW-ARFN--KD--GNVEVQKRD------NTTEVYSANHILVA 155 (479)
T ss_dssp -GCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEE-EEEC--TT--SCEEEEESS------SCCEEEEEEEEEEC
T ss_pred -cCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEe--eC--CEEEEEeCC------CcEEEEEeCEEEEc
Confidence 00011112 22233444556677766553 4433 22 455566544 3 247999999999
Q ss_pred cCCCCCCcCC-CCCCCCCCCceeeecCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccC
Q 014522 156 TGENAERVMP-DIEGLADFGGEVIHACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILG 234 (423)
Q Consensus 156 tG~~~~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~ 234 (423)
|| +.|..| .+||.+. .+++.+... ....+++++|||+|.+|+|+|..|++.|.+|+++.+.+ .+++..+.
T Consensus 156 tG--s~p~~p~~i~g~~~----~~~~~~~~~-l~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~- 226 (479)
T 2hqm_A 156 TG--GKAIFPENIPGFEL----GTDSDGFFR-LEEQPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGE-TVLRKFDE- 226 (479)
T ss_dssp CC--EEECCCTTSTTGGG----SBCHHHHHH-CSSCCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSS-SSCTTSCH-
T ss_pred CC--CCCCCCCCCCCccc----ccchHHHhc-ccccCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCC-ccccccCH-
Confidence 99 788888 8888642 122111111 12357899999999999999999999999999999998 44443321
Q ss_pred CChHHHHHHHHhhccHHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--c
Q 014522 235 KSTFELATLMMKWLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--I 312 (423)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i 312 (423)
+ ....+.+.+++.+|+++.+ +
T Consensus 227 ----~-----------------------------------------------------~~~~l~~~l~~~Gv~i~~~~~v 249 (479)
T 2hqm_A 227 ----C-----------------------------------------------------IQNTITDHYVKEGINVHKLSKI 249 (479)
T ss_dssp ----H-----------------------------------------------------HHHHHHHHHHHHTCEEECSCCE
T ss_pred ----H-----------------------------------------------------HHHHHHHHHHhCCeEEEeCCEE
Confidence 1 1112334455668888876 7
Q ss_pred eEEeCC------eEEEccC-cEecccEEEEcCCCCCCCCCc-cccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccC
Q 014522 313 KRISCG------QAELING-EKLDIDAIVLATGYRSNVPSW-LQESEF-FSENGFPKAPFPHGWKGNAGLYAVGFTRRGL 383 (423)
Q Consensus 313 ~~~~~~------~v~~~~g-~~~~~D~vi~a~G~~~~~~~l-l~~~~~-~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~ 383 (423)
.++..+ .+.+++| +++++|.||+|+|++|++ .| ++..++ .+++|++.+| ++++|+.|+|||+|||++.+
T Consensus 250 ~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~-~l~l~~~gl~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~ 327 (479)
T 2hqm_A 250 VKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHL-GMGSENVGIKLNSHDQIIAD-EYQNTNVPNIYSLGDVVGKV 327 (479)
T ss_dssp EEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEECC-CSSGGGGTCCBCTTSCBCCC-TTCBCSSTTEEECGGGTTSS
T ss_pred EEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCcc-ccChhhcCceECCCCCEeEC-CCCccCCCCEEEEEecCCCc
Confidence 777642 3667888 789999999999999998 77 788888 5668999998 57789999999999998654
Q ss_pred C---CcchhHHHHHHHHhhh
Q 014522 384 S---GASSDAMRIAQDIGKV 400 (423)
Q Consensus 384 ~---~a~~~g~~~a~~i~~~ 400 (423)
. .|..||+.+|.+|.+.
T Consensus 328 ~~~~~A~~~g~~aa~~i~~~ 347 (479)
T 2hqm_A 328 ELTPVAIAAGRKLSNRLFGP 347 (479)
T ss_dssp CCHHHHHHHHHHHHHHHHSC
T ss_pred ccHHHHHHHHHHHHHHhcCC
Confidence 3 6899999999999864
No 54
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=100.00 E-value=1.5e-32 Score=271.28 Aligned_cols=300 Identities=14% Similarity=0.092 Sum_probs=202.2
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccC-CceeecC----------CCccccCCCCCCCCCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTY-DRLNLHL----------PKQFCQLPKLQFPEDF 88 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~-~~~~~~~----------~~~~~~~~~~~~~~~~ 88 (423)
.++||+|||||++|+++|..|++.|++|+|||+.+.+||+|....+ +...+.. ....+.++.. .
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~---~-- 78 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVN---G-- 78 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEEC---S--
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccC---C--
Confidence 3579999999999999999999999999999998889988754211 0000000 0000011000 0
Q ss_pred CCCCCHHHH-----------HHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEE------EEeCE
Q 014522 89 PEYPTKRQF-----------IQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFE------YICRW 151 (423)
Q Consensus 89 ~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~------~~~d~ 151 (423)
........+ ...+...+++.+++++.++.+.. +...+.|.+.+. +... +.||+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~-----~~~~v~V~~~~G-----~~~~~~~~~~i~~d~ 148 (478)
T 1v59_A 79 DIKINVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFE-----DETKIRVTPVDG-----LEGTVKEDHILDVKN 148 (478)
T ss_dssp CEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEES-----SSSEEEEECCTT-----CTTCCSSCEEEEEEE
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEc-----cCCeEEEEecCC-----CcccccccceEEeCE
Confidence 000112222 22244556677888888776541 225666665431 1134 99999
Q ss_pred EEEccCCCCCCcCCCCCCCCCCCceeeecCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeeccc
Q 014522 152 LVVATGENAERVMPDIEGLADFGGEVIHACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPRE 231 (423)
Q Consensus 152 vviAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~ 231 (423)
||+||| +.|. .+||.......+.++.+... ....+++++|||+|.+|+|+|..|++.|.+|+++.|.+ .++|..
T Consensus 149 lViAtG--s~p~--~~~g~~~~~~~v~~~~~~~~-~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~ 222 (478)
T 1v59_A 149 IIVATG--SEVT--PFPGIEIDEEKIVSSTGALS-LKEIPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQP-QIGASM 222 (478)
T ss_dssp EEECCC--EEEC--CCTTCCCCSSSEECHHHHTT-CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSSSS
T ss_pred EEECcC--CCCC--CCCCCCCCCceEEcHHHHHh-hhccCceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCC-cccccc
Confidence 999999 5552 34554422112333333222 22247899999999999999999999999999999998 454533
Q ss_pred ccCCChHHHHHHHHhhccHHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC
Q 014522 232 ILGKSTFELATLMMKWLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG 311 (423)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 311 (423)
+. .....+.+.+++.+|+++.+
T Consensus 223 ~~----------------------------------------------------------~~~~~l~~~l~~~gv~i~~~ 244 (478)
T 1v59_A 223 DG----------------------------------------------------------EVAKATQKFLKKQGLDFKLS 244 (478)
T ss_dssp CH----------------------------------------------------------HHHHHHHHHHHHTTCEEECS
T ss_pred CH----------------------------------------------------------HHHHHHHHHHHHCCCEEEeC
Confidence 21 11112344456678998887
Q ss_pred --ceEEeC--C----eEEEc-----cCcEecccEEEEcCCCCCCCCC-ccccccc-ccCCCCCCCCCCCCCCCCCceEEE
Q 014522 312 --IKRISC--G----QAELI-----NGEKLDIDAIVLATGYRSNVPS-WLQESEF-FSENGFPKAPFPHGWKGNAGLYAV 376 (423)
Q Consensus 312 --i~~~~~--~----~v~~~-----~g~~~~~D~vi~a~G~~~~~~~-ll~~~~~-~~~~g~~~~~~~~~~~~~~~vya~ 376 (423)
+.++.. + .+.+. +++++++|.||+|+|++|++.. +++.+++ .+++|++.+| ++++|+.|+|||+
T Consensus 245 ~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd-~~~~t~~~~IyA~ 323 (478)
T 1v59_A 245 TKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIAGLGAEKIGLEVDKRGRLVID-DQFNSKFPHIKVV 323 (478)
T ss_dssp EEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECCTTSCTTTTTCCBCTTSCBCCC-TTSBCSSTTEEEC
T ss_pred CEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCCCCCchhcCceeCCCCCEeEC-cCCccCCCCEEEe
Confidence 777764 2 24554 4568999999999999999843 5788888 4568999998 5788999999999
Q ss_pred eeccccCC---CcchhHHHHHHHHhh
Q 014522 377 GFTRRGLS---GASSDAMRIAQDIGK 399 (423)
Q Consensus 377 Gd~~~~~~---~a~~~g~~~a~~i~~ 399 (423)
|||+.... .|..||+.+|.+|.+
T Consensus 324 GD~~~~~~~~~~A~~~g~~aa~~i~~ 349 (478)
T 1v59_A 324 GDVTFGPMLAHKAEEEGIAAVEMLKT 349 (478)
T ss_dssp GGGSSSCCCHHHHHHHHHHHHHHHHH
T ss_pred eccCCCcccHHHHHHHHHHHHHHHcC
Confidence 99997544 689999999999986
No 55
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=100.00 E-value=8.8e-33 Score=272.91 Aligned_cols=300 Identities=16% Similarity=0.152 Sum_probs=201.4
Q ss_pred cccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCccccccc-CCceee-cCC---CccccCCCCCCCCCCCCCCC
Q 014522 19 IWVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRT-YDRLNL-HLP---KQFCQLPKLQFPEDFPEYPT 93 (423)
Q Consensus 19 ~~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~-~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~ 93 (423)
..++||+|||||++|+++|..|+++|++|+|||+. ..||+|.... .+...+ ... ........+.++.... ...
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~-~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~-~~~ 95 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAELGARAAVVESH-KLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEG-KFN 95 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCC-CCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCC-ccC
Confidence 35789999999999999999999999999999976 6788764421 111000 000 0000111111111111 112
Q ss_pred HHHHH-----------HHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCC
Q 014522 94 KRQFI-----------QYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAER 162 (423)
Q Consensus 94 ~~~~~-----------~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~ 162 (423)
...+. ..+....++.++++..+. +..++ . ..+.+... + .++.||+||+||| +.|
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~~~--~--~~~~v~~~-------g-~~~~~d~lviAtG--~~p 160 (478)
T 3dk9_A 96 WRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGH-AAFTS--D--PKPTIEVS-------G-KKYTAPHILIATG--GMP 160 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESC-EEECS--C--SSCEEEET-------T-EEEECSCEEECCC--EEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEee--C--CeEEEEEC-------C-EEEEeeEEEEccC--CCC
Confidence 22222 233444455677765554 32221 1 33445533 3 6799999999999 788
Q ss_pred cCC---CCCCCCCCCceeeecCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHH
Q 014522 163 VMP---DIEGLADFGGEVIHACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFE 239 (423)
Q Consensus 163 ~~p---~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~ 239 (423)
..| .+||.+. ..++..... ....+++++|||+|.+|+|+|..|++.|.+|+++.|.+ .+++..+. +
T Consensus 161 ~~p~~~~i~G~~~----~~~~~~~~~-~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~-----~ 229 (478)
T 3dk9_A 161 STPHESQIPGASL----GITSDGFFQ-LEELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHD-KVLRSFDS-----M 229 (478)
T ss_dssp CCCCTTTSTTGGG----SBCHHHHTT-CCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSCTTSCH-----H
T ss_pred CCCCcCCCCCCce----eEchHHhhc-hhhcCccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCC-ccccccCH-----H
Confidence 888 8888652 122222221 23347899999999999999999999999999999988 44444332 1
Q ss_pred HHHHHHhhccHHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeC
Q 014522 240 LATLMMKWLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISC 317 (423)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~ 317 (423)
....+.+.+++.+|+++.+ +.++..
T Consensus 230 -----------------------------------------------------~~~~~~~~l~~~gv~i~~~~~v~~i~~ 256 (478)
T 3dk9_A 230 -----------------------------------------------------ISTNCTEELENAGVEVLKFSQVKEVKK 256 (478)
T ss_dssp -----------------------------------------------------HHHHHHHHHHHTTCEEETTEEEEEEEE
T ss_pred -----------------------------------------------------HHHHHHHHHHHCCCEEEeCCEEEEEEE
Confidence 1112344456678998887 677663
Q ss_pred --Ce----EEEcc-------CcEecccEEEEcCCCCCCCCCc-cccccc-ccCCCCCCCCCCCCCCCCCceEEEeecccc
Q 014522 318 --GQ----AELIN-------GEKLDIDAIVLATGYRSNVPSW-LQESEF-FSENGFPKAPFPHGWKGNAGLYAVGFTRRG 382 (423)
Q Consensus 318 --~~----v~~~~-------g~~~~~D~vi~a~G~~~~~~~l-l~~~~~-~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~ 382 (423)
++ +.+.+ |+++++|.||+|+|++|++..+ ++.+++ .+++|++.+| ++++|+.|+|||+|||++.
T Consensus 257 ~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~ 335 (478)
T 3dk9_A 257 TLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVD-EFQNTNVKGIYAVGDVCGK 335 (478)
T ss_dssp CSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTCCBCCC-TTCBCSSTTEEECGGGGCS
T ss_pred cCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCCCCCCchhcCCeeCCCCCEeeC-CCcccCCCCEEEEEecCCC
Confidence 23 44554 2679999999999999998546 778888 5678999999 5789999999999999965
Q ss_pred CC---CcchhHHHHHHHHhhh
Q 014522 383 LS---GASSDAMRIAQDIGKV 400 (423)
Q Consensus 383 ~~---~a~~~g~~~a~~i~~~ 400 (423)
.. .|..||+.+|.+|.+.
T Consensus 336 ~~~~~~A~~~g~~aa~~i~~~ 356 (478)
T 3dk9_A 336 ALLTPVAIAAGRKLAHRLFEY 356 (478)
T ss_dssp SCCHHHHHHHHHHHHHHHHSC
T ss_pred CccHhHHHHHHHHHHHHHcCC
Confidence 44 6899999999999865
No 56
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=100.00 E-value=1e-32 Score=271.46 Aligned_cols=302 Identities=17% Similarity=0.192 Sum_probs=202.5
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCccccccc-CCceeecCC----Cccc-cCCCCCCCC----CCCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRT-YDRLNLHLP----KQFC-QLPKLQFPE----DFPE 90 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~-~~~~~~~~~----~~~~-~~~~~~~~~----~~~~ 90 (423)
++||+|||||++|+++|..|++.|.+|+|||+. ..||.|.... .+...+... .... .......+. ++..
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 81 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFDYGI 81 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCEECHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCccCHHH
Confidence 479999999999999999999999999999998 6777664321 010000000 0000 000000000 0000
Q ss_pred CC-C----HHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCC
Q 014522 91 YP-T----KRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMP 165 (423)
Q Consensus 91 ~~-~----~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p 165 (423)
+. . ...+...+.+.+++.+++++.++.+. .+ ...+.|.+.+ ++..++.||+||+||| +.|..|
T Consensus 82 ~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~---id--~~~v~V~~~~-----G~~~~~~~d~lViAtG--~~~~~~ 149 (464)
T 2a8x_A 82 AYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTF---AD--ANTLLVDLND-----GGTESVTFDNAIIATG--SSTRLV 149 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEE---SS--SSEEEEEETT-----SCCEEEEEEEEEECCC--EEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE---ec--CCeEEEEeCC-----CceEEEEcCEEEECCC--CCCCCC
Confidence 00 0 01233344566667788887776543 22 2566676654 1226799999999999 777777
Q ss_pred CCCCCCCCCceeeecCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHH
Q 014522 166 DIEGLADFGGEVIHACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMM 245 (423)
Q Consensus 166 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~ 245 (423)
.++|.+.. +++..+... ....+++++|||+|.+|+|+|..|++.|.+|+++.|.+ .++|..+. ++
T Consensus 150 ~~~g~~~~---~~~~~~~~~-~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~~-----~~----- 214 (464)
T 2a8x_A 150 PGTSLSAN---VVTYEEQIL-SRELPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLP-RALPNEDA-----DV----- 214 (464)
T ss_dssp TTCCCBTT---EECHHHHHT-CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCH-----HH-----
T ss_pred CCCCCCce---EEecHHHhh-ccccCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCC-ccccccCH-----HH-----
Confidence 77775431 333333222 22357899999999999999999999999999999998 45553321 11
Q ss_pred hhccHHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeCCe----
Q 014522 246 KWLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISCGQ---- 319 (423)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~~---- 319 (423)
...+.+.+++.+|+++.+ +.++..++
T Consensus 215 ------------------------------------------------~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~ 246 (464)
T 2a8x_A 215 ------------------------------------------------SKEIEKQFKKLGVTILTATKVESIADGGSQVT 246 (464)
T ss_dssp ------------------------------------------------HHHHHHHHHHHTCEEECSCEEEEEEECSSCEE
T ss_pred ------------------------------------------------HHHHHHHHHHcCCEEEeCcEEEEEEEcCCeEE
Confidence 111234455568888876 77776432
Q ss_pred EEEc-cC--cEecccEEEEcCCCCCCCCCc-cccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccCC---CcchhHH
Q 014522 320 AELI-NG--EKLDIDAIVLATGYRSNVPSW-LQESEF-FSENGFPKAPFPHGWKGNAGLYAVGFTRRGLS---GASSDAM 391 (423)
Q Consensus 320 v~~~-~g--~~~~~D~vi~a~G~~~~~~~l-l~~~~~-~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~---~a~~~g~ 391 (423)
+.+. +| +++++|.||+|+|++|++..+ ++.+++ .+++|++.+| .+++|+.|+|||+|||+.... .|..||+
T Consensus 247 v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~ 325 (464)
T 2a8x_A 247 VTVTKDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRKAIGVD-DYMRTNVGHIYAIGDVNGLLQLAHVAEAQGV 325 (464)
T ss_dssp EEEESSSCEEEEEESEEEECSCEEECCSSSCHHHHTCCBCTTSSBCCC-TTSBCSSTTEEECGGGGCSSCSHHHHHHHHH
T ss_pred EEEEcCCceEEEEcCEEEECCCCCccCCCCCchhcCCccCCCCCEeEC-cCCccCCCCEEEeECcCCCccCHHHHHHHHH
Confidence 3443 66 689999999999999998333 567777 4567999999 578899999999999997544 6899999
Q ss_pred HHHHHHhh
Q 014522 392 RIAQDIGK 399 (423)
Q Consensus 392 ~~a~~i~~ 399 (423)
.+|.+|.+
T Consensus 326 ~aa~~i~g 333 (464)
T 2a8x_A 326 VAAETIAG 333 (464)
T ss_dssp HHHHHHHT
T ss_pred HHHHHhcC
Confidence 99999986
No 57
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.98 E-value=1e-32 Score=271.22 Aligned_cols=299 Identities=16% Similarity=0.161 Sum_probs=203.2
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccC-CceeecC----CCccccCCCCCCC--C---CCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTY-DRLNLHL----PKQFCQLPKLQFP--E---DFP 89 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~-~~~~~~~----~~~~~~~~~~~~~--~---~~~ 89 (423)
+++||+|||||++|+++|..|+++|++|+|||+ ..+||+|....+ +...+.. .........+.++ . ++.
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 82 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGESRFDWA 82 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCCEECHH
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCCCcCHH
Confidence 368999999999999999999999999999999 678887643111 0000000 0000000000000 0 000
Q ss_pred CCC-----CHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCc-
Q 014522 90 EYP-----TKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERV- 163 (423)
Q Consensus 90 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~- 163 (423)
... ....+..++.....+.++++..+ ++..++ . .. +.+.. + + ..+.||++|+||| +.|.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i~--~--~~--v~~~~-~----~-~~~~~d~lviAtG--~~p~~ 147 (463)
T 4dna_A 83 KLVAAKEQEIARLEGLYRKGLANAGAEILDT-RAELAG--P--NT--VKLLA-S----G-KTVTAERIVIAVG--GHPSP 147 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCEEEES-CEEESS--S--SE--EEETT-T----T-EEEEEEEEEECCC--EEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEee--C--CE--EEEec-C----C-eEEEeCEEEEecC--CCccc
Confidence 000 11123334455556668876655 343331 1 33 66632 0 4 6899999999999 7888
Q ss_pred CCCCCCCCCCCceeeecCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHH
Q 014522 164 MPDIEGLADFGGEVIHACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATL 243 (423)
Q Consensus 164 ~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~ 243 (423)
.|.+||.+.. +++.+.. .....+++++|||+|.+|+|+|..+++.|.+|+++.+.+ .+++..+.
T Consensus 148 ~p~i~G~~~~----~~~~~~~-~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~-~~l~~~~~---------- 211 (463)
T 4dna_A 148 HDALPGHELC----ITSNEAF-DLPALPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGK-EILSRFDQ---------- 211 (463)
T ss_dssp CTTSTTGGGC----BCHHHHT-TCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCH----------
T ss_pred CCCCCCcccc----ccHHHHh-hhhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCC-ccccccCH----------
Confidence 8888886531 2222222 223457899999999999999999999999999999988 34343321
Q ss_pred HHhhccHHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeCC---
Q 014522 244 MMKWLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISCG--- 318 (423)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~--- 318 (423)
.....+.+.+++.+|+++.+ +.++..+
T Consensus 212 ------------------------------------------------~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~ 243 (463)
T 4dna_A 212 ------------------------------------------------DMRRGLHAAMEEKGIRILCEDIIQSVSADADG 243 (463)
T ss_dssp ------------------------------------------------HHHHHHHHHHHHTTCEEECSCCEEEEEECTTS
T ss_pred ------------------------------------------------HHHHHHHHHHHHCCCEEECCCEEEEEEEcCCC
Confidence 11222345566778999876 7777653
Q ss_pred --eEE-EccCcEecccEEEEcCCCCCCCCCc-cccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccCC---CcchhH
Q 014522 319 --QAE-LINGEKLDIDAIVLATGYRSNVPSW-LQESEF-FSENGFPKAPFPHGWKGNAGLYAVGFTRRGLS---GASSDA 390 (423)
Q Consensus 319 --~v~-~~~g~~~~~D~vi~a~G~~~~~~~l-l~~~~~-~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~---~a~~~g 390 (423)
.+. +.+|+ +++|.||+|+|++|+...+ ++..++ .+++|++.+| .+++|+.|+|||+|||+.... .|..||
T Consensus 244 ~~~v~~~~~g~-i~aD~Vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd-~~~~t~~~~iya~GD~~~~~~~~~~A~~~g 321 (463)
T 4dna_A 244 RRVATTMKHGE-IVADQVMLALGRMPNTNGLGLEAAGVRTNELGAIIVD-AFSRTSTPGIYALGDVTDRVQLTPVAIHEA 321 (463)
T ss_dssp CEEEEESSSCE-EEESEEEECSCEEESCTTSSTGGGTCCBCTTSCBCCC-TTCBCSSTTEEECSGGGSSCCCHHHHHHHH
T ss_pred EEEEEEcCCCe-EEeCEEEEeeCcccCCCCCCccccCceECCCCCEeEC-cCCCCCCCCEEEEEecCCCCCChHHHHHHH
Confidence 366 77887 9999999999999998444 677787 5678999999 578899999999999998544 689999
Q ss_pred HHHHHHHhhh
Q 014522 391 MRIAQDIGKV 400 (423)
Q Consensus 391 ~~~a~~i~~~ 400 (423)
+.+|.+|.+.
T Consensus 322 ~~aa~~i~g~ 331 (463)
T 4dna_A 322 MCFIETEYKN 331 (463)
T ss_dssp HHHHHHHHSS
T ss_pred HHHHHHHcCC
Confidence 9999999864
No 58
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.98 E-value=2.6e-32 Score=268.08 Aligned_cols=292 Identities=15% Similarity=0.171 Sum_probs=200.0
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCccccccc-CCceee-cC--------CCccccCCCCCCCCCCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRT-YDRLNL-HL--------PKQFCQLPKLQFPEDFP 89 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~-~~~~~~-~~--------~~~~~~~~~~~~~~~~~ 89 (423)
.++||+|||||++|+++|..|++.|.+|+|||+. .+||+|.... .+...+ .. ....+.+.. +. .
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~---~~--~ 76 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK-ALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQA---SG--G 76 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCC---C----
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC-CCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCccc---CC--C
Confidence 3579999999999999999999999999999997 6788875421 110000 00 000011110 00 0
Q ss_pred CCCCHHHH-----------HHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCC
Q 014522 90 EYPTKRQF-----------IQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGE 158 (423)
Q Consensus 90 ~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~ 158 (423)
......+ ...+...+.+.+++++.++ +..++ . .. |.+ + + ..+.||+||+|||
T Consensus 77 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i~--~--~~--v~~-~------g-~~~~~d~lviAtG- 139 (463)
T 2r9z_A 77 -TLDWPRLVAGRDRYIGAINSFWDGYVERLGITRVDGH-ARFVD--A--HT--IEV-E------G-QRLSADHIVIATG- 139 (463)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESC-EEEEE--T--TE--EEE-T------T-EEEEEEEEEECCC-
T ss_pred -CcCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeE-EEEcc--C--CE--EEE-C------C-EEEEcCEEEECCC-
Confidence 0112222 2223344456688876664 44333 2 33 555 3 4 5899999999999
Q ss_pred CCCCcCCCCCCCCCCCceeeecCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChH
Q 014522 159 NAERVMPDIEGLADFGGEVIHACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTF 238 (423)
Q Consensus 159 ~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~ 238 (423)
+.|..|.+||.+. ..+..+... ....+++++|||+|.+|+|+|..|++.|.+|+++.+.+ .+++..+.
T Consensus 140 -s~p~~p~i~G~~~----~~~~~~~~~-~~~~~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~-~~l~~~~~----- 207 (463)
T 2r9z_A 140 -GRPIVPRLPGAEL----GITSDGFFA-LQQQPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALED-RLLFQFDP----- 207 (463)
T ss_dssp -EEECCCSCTTGGG----SBCHHHHHH-CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCH-----
T ss_pred -CCCCCCCCCCccc----eecHHHHhh-hhccCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC-ccccccCH-----
Confidence 7888888888632 122222111 12346899999999999999999999999999999988 34343221
Q ss_pred HHHHHHHhhccHHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEe
Q 014522 239 ELATLMMKWLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRIS 316 (423)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~ 316 (423)
+ ....+.+.+++.+|+++.+ +.++.
T Consensus 208 ~-----------------------------------------------------~~~~l~~~l~~~gv~i~~~~~v~~i~ 234 (463)
T 2r9z_A 208 L-----------------------------------------------------LSATLAENMHAQGIETHLEFAVAALE 234 (463)
T ss_dssp H-----------------------------------------------------HHHHHHHHHHHTTCEEESSCCEEEEE
T ss_pred H-----------------------------------------------------HHHHHHHHHHHCCCEEEeCCEEEEEE
Confidence 1 1112334455678898877 67776
Q ss_pred CC----eEEEccCc-EecccEEEEcCCCCCCCCCc-cccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccCC---Cc
Q 014522 317 CG----QAELINGE-KLDIDAIVLATGYRSNVPSW-LQESEF-FSENGFPKAPFPHGWKGNAGLYAVGFTRRGLS---GA 386 (423)
Q Consensus 317 ~~----~v~~~~g~-~~~~D~vi~a~G~~~~~~~l-l~~~~~-~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~---~a 386 (423)
.+ .+.+.+|+ ++++|.||+|+|++|++..+ ++.+++ .+++|++.+| .+++|+.|+|||+|||+.... .|
T Consensus 235 ~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~~A 313 (463)
T 2r9z_A 235 RDAQGTTLVAQDGTRLEGFDSVIWAVGRAPNTRDLGLEAAGIEVQSNGMVPTD-AYQNTNVPGVYALGDITGRDQLTPVA 313 (463)
T ss_dssp EETTEEEEEETTCCEEEEESEEEECSCEEESCTTSCHHHHTCCCCTTSCCCCC-TTSBCSSTTEEECGGGGTSCCCHHHH
T ss_pred EeCCeEEEEEeCCcEEEEcCEEEECCCCCcCCCCCCchhcCCccCCCCCEeEC-CCCccCCCCEEEEeecCCCcccHHHH
Confidence 42 36778998 89999999999999998444 566677 5668999998 578899999999999987543 68
Q ss_pred chhHHHHHHHHhhh
Q 014522 387 SSDAMRIAQDIGKV 400 (423)
Q Consensus 387 ~~~g~~~a~~i~~~ 400 (423)
..||+.+|.+|.+.
T Consensus 314 ~~~g~~aa~~i~g~ 327 (463)
T 2r9z_A 314 IAAGRRLAERLFDG 327 (463)
T ss_dssp HHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHcCC
Confidence 89999999999863
No 59
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.98 E-value=1.6e-33 Score=272.21 Aligned_cols=282 Identities=20% Similarity=0.201 Sum_probs=199.1
Q ss_pred CCeEEECCChHHHHHHHHHHHcCC--CEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHH
Q 014522 22 NGPVIVGAGPSGLATAACLRDQGV--PFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQ 99 (423)
Q Consensus 22 ~~vvIIGaG~aGl~~A~~L~~~g~--~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (423)
+||+|||||++|+++|..|+++|. +|+|||+++..+. ....+ +..+.... ..+.. +..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y-------~~~~l--~~~~l~~~--~~~~~---------~~~ 61 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPY-------QRPPL--SKAYLKSG--GDPNS---------LMF 61 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSB-------CSGGG--GTGGGGSC--CCTTS---------SBS
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCC-------CCccC--CHHHHCCC--CCHHH---------ccC
Confidence 589999999999999999999998 9999999875431 11100 00000000 00000 001
Q ss_pred HHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCCCCCCceeee
Q 014522 100 YLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDIEGLADFGGEVIH 179 (423)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~~~~~~~~~~ 179 (423)
.......+.+++++. ++|+.++... .. +++.+ + ..+.||+||+||| +.|..|.+||.+.. + ++.
T Consensus 62 ~~~~~~~~~~i~~~~-~~v~~id~~~--~~--v~~~~------g-~~~~~d~lvlAtG--~~p~~~~i~g~~~~-~-v~~ 125 (404)
T 3fg2_P 62 RPEKFFQDQAIELIS-DRMVSIDREG--RK--LLLAS------G-TAIEYGHLVLATG--ARNRMLDVPNASLP-D-VLY 125 (404)
T ss_dssp SCHHHHHHTTEEEEC-CCEEEEETTT--TE--EEESS------S-CEEECSEEEECCC--EEECCCCSTTTTST-T-EEC
T ss_pred CCHHHHHhCCCEEEE-EEEEEEECCC--CE--EEECC------C-CEEECCEEEEeeC--CCccCCCCCCCCCC-c-EEE
Confidence 112334456888877 8899987654 44 77765 4 5899999999999 78888888886532 1 121
Q ss_pred cCCC-----CCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHhhccHHHHH
Q 014522 180 ACDY-----KSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPLWLVD 254 (423)
Q Consensus 180 ~~~~-----~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (423)
.... .......+++++|||+|.+|+|+|..+.+.|.+|+++.+.+. +++...
T Consensus 126 ~~~~~d~~~l~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~-~~~~~~---------------------- 182 (404)
T 3fg2_P 126 LRTLDESEVLRQRMPDKKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPR-VMARVV---------------------- 182 (404)
T ss_dssp CSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS-TTTTTS----------------------
T ss_pred ECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCc-chhhcc----------------------
Confidence 1111 111123578999999999999999999999999999999883 323211
Q ss_pred HHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeCC-----eEEEccCcE
Q 014522 255 KILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISCG-----QAELINGEK 327 (423)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~-----~v~~~~g~~ 327 (423)
.+.....+.+.+++.+|+++.+ +.++..+ +|.+++|++
T Consensus 183 -----------------------------------~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~ 227 (404)
T 3fg2_P 183 -----------------------------------TPEISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNT 227 (404)
T ss_dssp -----------------------------------CHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCE
T ss_pred -----------------------------------CHHHHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCCCE
Confidence 1112222345566778999876 7777653 478899999
Q ss_pred ecccEEEEcCCCCCCCCCcccccccccCCCCCCCCCCCCCCCCCceEEEeeccccC-------------CCcchhHHHHH
Q 014522 328 LDIDAIVLATGYRSNVPSWLQESEFFSENGFPKAPFPHGWKGNAGLYAVGFTRRGL-------------SGASSDAMRIA 394 (423)
Q Consensus 328 ~~~D~vi~a~G~~~~~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~-------------~~a~~~g~~~a 394 (423)
+++|.||+|+|+.|+. .+++.+++..++| +.+| .+++|+.|+|||+|||+... ..|..||+.+|
T Consensus 228 i~aD~Vv~a~G~~p~~-~l~~~~gl~~~~G-i~vd-~~~~t~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~aa 304 (404)
T 3fg2_P 228 LPCDLVVVGVGVIPNV-EIAAAAGLPTAAG-IIVD-QQLLTSDPHISAIGDCALFESVRFGETMRVESVQNATDQARCVA 304 (404)
T ss_dssp EECSEEEECCCEEECC-HHHHHTTCCBSSS-EEEC-TTSBCSSTTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHHHH
T ss_pred EEcCEEEECcCCccCH-HHHHhCCCCCCCC-EEEC-CCcccCCCCEEEeecceeecCccCCceeeehHHHHHHHHHHHHH
Confidence 9999999999999997 6788888855567 7777 57889999999999998532 25889999999
Q ss_pred HHHhhh
Q 014522 395 QDIGKV 400 (423)
Q Consensus 395 ~~i~~~ 400 (423)
.+|.+.
T Consensus 305 ~~i~g~ 310 (404)
T 3fg2_P 305 ARLTGD 310 (404)
T ss_dssp HHTTTC
T ss_pred HHhCCC
Confidence 999875
No 60
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.98 E-value=2.2e-32 Score=269.95 Aligned_cols=306 Identities=16% Similarity=0.182 Sum_probs=200.6
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCC------CCcccccccC-Cceee-cCC---------CccccCCCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAEC------IASLWQKRTY-DRLNL-HLP---------KQFCQLPKL 82 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~------~gg~~~~~~~-~~~~~-~~~---------~~~~~~~~~ 82 (423)
+.+||+|||||++|+++|..|++.|++|+|||+.+. .||+|....+ +...+ ... ...+.+...
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~ 81 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTG 81 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEECS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcccC
Confidence 468999999999999999999999999999999864 4554432110 00000 000 000011000
Q ss_pred CCCCCCCCCC-CHH----HHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccC
Q 014522 83 QFPEDFPEYP-TKR----QFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATG 157 (423)
Q Consensus 83 ~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG 157 (423)
....++.... ... .+...+....++.++++..+..+. .+ ...+.|.+.+ ++...+.||+||+|||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~---~~--~~~~~v~~~~-----g~~~~~~~d~lvlAtG 151 (476)
T 3lad_A 82 EVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKL---LA--GKKVEVTAAD-----GSSQVLDTENVILASG 151 (476)
T ss_dssp CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEE---CS--TTCEEEECTT-----SCEEEECCSCEEECCC
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE---ec--CCEEEEEcCC-----CceEEEEcCEEEEcCC
Confidence 0000000000 111 122223344556677766555332 22 2555565543 1336899999999999
Q ss_pred CCCCCcCCCCCCCCCCCceeeecCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCCh
Q 014522 158 ENAERVMPDIEGLADFGGEVIHACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKST 237 (423)
Q Consensus 158 ~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~ 237 (423)
+.|..|+.++... ..++++.+... ....+++++|||+|.+|+|+|..|++.|.+|+++.|.+ .++|..+.
T Consensus 152 --~~p~~~~~~~~~~--~~v~~~~~~~~-~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~---- 221 (476)
T 3lad_A 152 --SKPVEIPPAPVDQ--DVIVDSTGALD-FQNVPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMD-KFLPAVDE---- 221 (476)
T ss_dssp --EEECCCTTSCCCS--SSEEEHHHHTS-CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSSTTSCH----
T ss_pred --CCCCCCCCCCCCc--ccEEechhhhc-cccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCC-CcCcccCH----
Confidence 6776554444322 22333333222 33457899999999999999999999999999999998 44443321
Q ss_pred HHHHHHHHhhccHHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEE
Q 014522 238 FELATLMMKWLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRI 315 (423)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~ 315 (423)
.....+.+.+++.+|+++.+ +.++
T Consensus 222 ------------------------------------------------------~~~~~l~~~l~~~Gv~v~~~~~v~~i 247 (476)
T 3lad_A 222 ------------------------------------------------------QVAKEAQKILTKQGLKILLGARVTGT 247 (476)
T ss_dssp ------------------------------------------------------HHHHHHHHHHHHTTEEEEETCEEEEE
T ss_pred ------------------------------------------------------HHHHHHHHHHHhCCCEEEECCEEEEE
Confidence 11222344566778999877 7777
Q ss_pred eCC--e--EEEccC---cEecccEEEEcCCCCCCCCCc-cccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccCC--
Q 014522 316 SCG--Q--AELING---EKLDIDAIVLATGYRSNVPSW-LQESEF-FSENGFPKAPFPHGWKGNAGLYAVGFTRRGLS-- 384 (423)
Q Consensus 316 ~~~--~--v~~~~g---~~~~~D~vi~a~G~~~~~~~l-l~~~~~-~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~-- 384 (423)
..+ + +.+.++ +++++|.||+|+|++|+...+ ++..++ .+++|++.+| .+++|+.|+|||+|||++.+.
T Consensus 248 ~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd-~~~~t~~~~Iya~GD~~~~~~~~ 326 (476)
T 3lad_A 248 EVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVD-DYCATSVPGVYAIGDVVRGAMLA 326 (476)
T ss_dssp EECSSCEEEEEESSSEEEEEEESEEEECSCEEECCTTCCSSCCSCCBCTTSCBCCC-TTSBCSSTTEEECGGGSSSCCCH
T ss_pred EEcCCEEEEEEEeCCCcEEEECCEEEEeeCCcccCCCCCccccCccccCCCCEeeC-CCcccCCCCEEEEEccCCCcccH
Confidence 643 2 556654 689999999999999998554 777787 5668999999 578899999999999996544
Q ss_pred -CcchhHHHHHHHHhhh
Q 014522 385 -GASSDAMRIAQDIGKV 400 (423)
Q Consensus 385 -~a~~~g~~~a~~i~~~ 400 (423)
.|..||+.+|.+|.+.
T Consensus 327 ~~A~~~g~~aa~~i~g~ 343 (476)
T 3lad_A 327 HKASEEGVVVAERIAGH 343 (476)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhcCC
Confidence 6899999999999754
No 61
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.98 E-value=7.2e-33 Score=273.75 Aligned_cols=299 Identities=16% Similarity=0.136 Sum_probs=202.1
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCccccccc-CCceeecC----CCccccCCCCCCCCCCCCCC---
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRT-YDRLNLHL----PKQFCQLPKLQFPEDFPEYP--- 92 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~~--- 92 (423)
.+||+|||||++|+++|..|+++|++|+|||+ ..+||.|.... .+...+.. .........+.++...+.+.
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 104 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGALGKRVAIAEE-YRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADPIFNWEK 104 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCCEECHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCCccCHHH
Confidence 47999999999999999999999999999999 67888765421 11000000 00000000000000000000
Q ss_pred -------CHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCc-C
Q 014522 93 -------TKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERV-M 164 (423)
Q Consensus 93 -------~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~-~ 164 (423)
....+..++.....+.++++..+ .+..++ . .. +.+.. + + ..+.||++|+||| +.|. .
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~i~--~--~~--v~v~~-~----~-~~~~~d~lviAtG--~~p~~~ 169 (484)
T 3o0h_A 105 LVAAKNKEISRLEGLYREGLQNSNVHIYES-RAVFVD--E--HT--LELSV-T----G-ERISAEKILIATG--AKIVSN 169 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEEES-CEEEEE--T--TE--EEETT-T----C-CEEEEEEEEECCC--EEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEee--C--CE--EEEec-C----C-eEEEeCEEEEccC--CCcccC
Confidence 11233344555566678876655 344443 2 33 55541 0 3 5899999999999 7888 8
Q ss_pred CCCCCCCCCCceeeecCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHH
Q 014522 165 PDIEGLADFGGEVIHACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLM 244 (423)
Q Consensus 165 p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~ 244 (423)
|.+||.+. +...+........+++++|||+|.+|+|+|..|++.|.+|+++.+.+ .+++....
T Consensus 170 p~i~G~~~-----~~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~-~~l~~~~~----------- 232 (484)
T 3o0h_A 170 SAIKGSDL-----CLTSNEIFDLEKLPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGD-LILRNFDY----------- 232 (484)
T ss_dssp --CBTGGG-----SBCTTTGGGCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCH-----------
T ss_pred CCCCCccc-----cccHHHHHhHHhcCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCC-ccccccCH-----------
Confidence 88888653 22222222233457899999999999999999999999999999988 34343321
Q ss_pred HhhccHHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeCC----
Q 014522 245 MKWLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISCG---- 318 (423)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~---- 318 (423)
.+...+.+.+++.+|+++.+ +.++..+
T Consensus 233 -----------------------------------------------~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v 265 (484)
T 3o0h_A 233 -----------------------------------------------DLRQLLNDAMVAKGISIIYEATVSQVQSTENCY 265 (484)
T ss_dssp -----------------------------------------------HHHHHHHHHHHHHTCEEESSCCEEEEEECSSSE
T ss_pred -----------------------------------------------HHHHHHHHHHHHCCCEEEeCCEEEEEEeeCCEE
Confidence 11112344455668888876 7777654
Q ss_pred eEEEccCcEecccEEEEcCCCCCCCCCc-cccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccCC---CcchhHHHH
Q 014522 319 QAELINGEKLDIDAIVLATGYRSNVPSW-LQESEF-FSENGFPKAPFPHGWKGNAGLYAVGFTRRGLS---GASSDAMRI 393 (423)
Q Consensus 319 ~v~~~~g~~~~~D~vi~a~G~~~~~~~l-l~~~~~-~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~---~a~~~g~~~ 393 (423)
.+.+.+|+++++|.||+|+|++|+...+ ++..++ .+++|++.+| .+++|+.|+|||+|||++... .|..||+.+
T Consensus 266 ~v~~~~g~~i~aD~Vi~A~G~~p~~~~l~l~~~g~~~~~~G~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~a 344 (484)
T 3o0h_A 266 NVVLTNGQTICADRVMLATGRVPNTTGLGLERAGVKVNEFGAVVVD-EKMTTNVSHIWAVGDVTGHIQLTPVAIHDAMCF 344 (484)
T ss_dssp EEEETTSCEEEESEEEECCCEEECCTTCCHHHHTCCBCTTSCBCCC-TTSBCSSTTEEECGGGGTSCCCHHHHHHHHHHH
T ss_pred EEEECCCcEEEcCEEEEeeCCCcCCCCCChhhcCceECCCCCEeEC-CCCCCCCCCEEEEEecCCCCcCHHHHHHHHHHH
Confidence 3778899999999999999999998444 566777 5678999998 578899999999999998544 689999999
Q ss_pred HHHHhhh
Q 014522 394 AQDIGKV 400 (423)
Q Consensus 394 a~~i~~~ 400 (423)
|.+|.+.
T Consensus 345 a~~i~~~ 351 (484)
T 3o0h_A 345 VKNAFEN 351 (484)
T ss_dssp HHHHHC-
T ss_pred HHHHcCC
Confidence 9999864
No 62
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.98 E-value=1.5e-32 Score=263.65 Aligned_cols=282 Identities=21% Similarity=0.236 Sum_probs=201.0
Q ss_pred cCCeEEECCChHHHHHHHHHHHcC--CCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQG--VPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFI 98 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g--~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (423)
++||+|||||++|+++|..|++.| .+|+++|++. |..|..... +. ..........+.
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~--g~~~~~~~l-------~~------------~~~~~~~~~~~~ 62 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD--GRSYSKPML-------ST------------GFSKNKDADGLA 62 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC--CCEECGGGG-------GG------------TTTTTCCHHHHE
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC--CCccCcccc-------cH------------HHhCCCCHHHhh
Confidence 589999999999999999999998 5799999875 222211100 00 001112334443
Q ss_pred H-HHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCCCCCCcee
Q 014522 99 Q-YLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDIEGLADFGGEV 177 (423)
Q Consensus 99 ~-~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~~~~~~~~ 177 (423)
. ++..++++.+++++.+++|+.++... .. |.+.+ ..+.||+||+||| +.|..|.+||... ..+
T Consensus 63 ~~~~~~~~~~~~v~~~~~~~v~~i~~~~--~~--v~~~~--------~~~~~d~lviAtG--~~p~~p~i~g~~~--~~v 126 (384)
T 2v3a_A 63 MAEPGAMAEQLNARILTHTRVTGIDPGH--QR--IWIGE--------EEVRYRDLVLAWG--AEPIRVPVEGDAQ--DAL 126 (384)
T ss_dssp EECHHHHHHHTTCEEECSCCCCEEEGGG--TE--EEETT--------EEEECSEEEECCC--EEECCCCCBSTTT--TCE
T ss_pred ccCHHHHHHhCCcEEEeCCEEEEEECCC--CE--EEECC--------cEEECCEEEEeCC--CCcCCCCCCCcCc--CCE
Confidence 2 45666777899988899998887643 33 66643 4799999999999 7888888888643 123
Q ss_pred eecCCCCCC-----CCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHhhccHHH
Q 014522 178 IHACDYKSG-----EKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPLWL 252 (423)
Q Consensus 178 ~~~~~~~~~-----~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (423)
++..+..+. ....+++++|||+|.+|+|+|..|++.|.+|+++.+.+ .+++...
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~~~~~~-------------------- 185 (384)
T 2v3a_A 127 YPINDLEDYARFRQAAAGKRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCE-QVMPGLL-------------------- 185 (384)
T ss_dssp EECSSHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSSTTTS--------------------
T ss_pred EEECCHHHHHHHHHhhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCc-chhhccc--------------------
Confidence 333222110 11237899999999999999999999999999999988 3434321
Q ss_pred HHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeC--C--eEEEccCc
Q 014522 253 VDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISC--G--QAELINGE 326 (423)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~--~--~v~~~~g~ 326 (423)
.+.....+.+.+++.+++++.+ +.++.. + .+.+.+|+
T Consensus 186 -------------------------------------~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~ 228 (384)
T 2v3a_A 186 -------------------------------------HPAAAKAVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDGE 228 (384)
T ss_dssp -------------------------------------CHHHHHHHHHHHHTTTCEEEESCCEEEEEEETTEEEEEETTSC
T ss_pred -------------------------------------CHHHHHHHHHHHHHcCCEEEeCCEEEEEEecCCEEEEEECCCC
Confidence 0111122344456678888876 666653 2 36778899
Q ss_pred EecccEEEEcCCCCCCCCCcccccccccCCCCCCCCCCCCCCCCCceEEEeeccc--cC-----CCcchhHHHHHHHHhh
Q 014522 327 KLDIDAIVLATGYRSNVPSWLQESEFFSENGFPKAPFPHGWKGNAGLYAVGFTRR--GL-----SGASSDAMRIAQDIGK 399 (423)
Q Consensus 327 ~~~~D~vi~a~G~~~~~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~--~~-----~~a~~~g~~~a~~i~~ 399 (423)
++++|.||+|+|+.|+. .+++.+++..++| +.+| ++++|+.|+|||+|||+. +. ..|..||+.+|.+|.+
T Consensus 229 ~i~~d~vv~a~G~~p~~-~l~~~~g~~~~~g-i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~~~~~a~~~g~~~a~~i~g 305 (384)
T 2v3a_A 229 VIPCDLVVSAVGLRPRT-ELAFAAGLAVNRG-IVVD-RSLRTSHANIYALGDCAEVDGLNLLYVMPLMACARALAQTLAG 305 (384)
T ss_dssp EEEESEEEECSCEEECC-HHHHHTTCCBSSS-EEEC-TTCBCSSTTEEECGGGEEETTBCCCSHHHHHHHHHHHHHHHTT
T ss_pred EEECCEEEECcCCCcCH-HHHHHCCCCCCCC-EEEC-CCCCCCCCCEEEeeeeeeECCCCcchHHHHHHHHHHHHHHhcC
Confidence 99999999999999997 5788888854568 7777 468899999999999984 21 1468999999999986
Q ss_pred h
Q 014522 400 V 400 (423)
Q Consensus 400 ~ 400 (423)
.
T Consensus 306 ~ 306 (384)
T 2v3a_A 306 N 306 (384)
T ss_dssp C
T ss_pred C
Confidence 3
No 63
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.98 E-value=5.6e-32 Score=265.84 Aligned_cols=296 Identities=18% Similarity=0.190 Sum_probs=198.6
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccC-CceeecCC---------CccccCCCCCCCCCCCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTY-DRLNLHLP---------KQFCQLPKLQFPEDFPE 90 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~-~~~~~~~~---------~~~~~~~~~~~~~~~~~ 90 (423)
.+||+|||||++|+++|..|++.|.+|+|||+.+ .||+|....+ +...+... ...+.+..... .++..
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~~~~-~~~~~ 83 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPE-LDLKK 83 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEECCCE-ECHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCCCCC-cCHHH
Confidence 4799999999999999999999999999999987 8887744211 10000000 00001110000 00000
Q ss_pred CC-CHHHHHHH----HHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCC
Q 014522 91 YP-TKRQFIQY----LESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMP 165 (423)
Q Consensus 91 ~~-~~~~~~~~----~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p 165 (423)
+. ....+.++ +...+++.+++++.++.+. + +. .. +.+.. .++.||+||+||| +.|..|
T Consensus 84 ~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~--~~--~~--v~v~g--------~~~~~d~lViATG--s~p~~p 146 (464)
T 2eq6_A 84 LGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARL-V--GP--KE--VEVGG--------ERYGAKSLILATG--SEPLEL 146 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEE-E--ET--TE--EEETT--------EEEEEEEEEECCC--EEECCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEE-c--cC--CE--EEEcc--------EEEEeCEEEEcCC--CCCCCC
Confidence 00 11122222 3445566788887776442 3 22 33 55532 5799999999999 777766
Q ss_pred C-CCCCCCCCceeeecCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHH
Q 014522 166 D-IEGLADFGGEVIHACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLM 244 (423)
Q Consensus 166 ~-~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~ 244 (423)
+ +++. ..++++.+........+++++|||+|.+|+|+|..|++.|.+|+++.+.+ .++|..+. +
T Consensus 147 ~gi~~~----~~v~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~-----~----- 211 (464)
T 2eq6_A 147 KGFPFG----EDVWDSTRALKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMP-EILPQGDP-----E----- 211 (464)
T ss_dssp TTBCCS----SSEECHHHHTCGGGCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCH-----H-----
T ss_pred CCCCCC----CcEEcHHHHHhhhhhcCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCC-ccccccCH-----H-----
Confidence 5 5552 12344333333222257899999999999999999999999999999988 45443321 1
Q ss_pred HhhccHHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeCC--e-
Q 014522 245 MKWLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISCG--Q- 319 (423)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~--~- 319 (423)
+...+.+.+++.+|+++.+ +.++..+ +
T Consensus 212 ------------------------------------------------~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~ 243 (464)
T 2eq6_A 212 ------------------------------------------------TAALLRRALEKEGIRVRTKTKAVGYEKKKDGL 243 (464)
T ss_dssp ------------------------------------------------HHHHHHHHHHHTTCEEECSEEEEEEEEETTEE
T ss_pred ------------------------------------------------HHHHHHHHHHhcCCEEEcCCEEEEEEEeCCEE
Confidence 1112344455678998877 6666542 2
Q ss_pred -EEEc-c--Cc--EecccEEEEcCCCCCCCCCc-cccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccCC---Ccch
Q 014522 320 -AELI-N--GE--KLDIDAIVLATGYRSNVPSW-LQESEF-FSENGFPKAPFPHGWKGNAGLYAVGFTRRGLS---GASS 388 (423)
Q Consensus 320 -v~~~-~--g~--~~~~D~vi~a~G~~~~~~~l-l~~~~~-~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~---~a~~ 388 (423)
+.+. + |+ ++++|.||+|+|++|+...+ ++..++ .+++|++.+| .+++|+.|+|||+|||+..+. .|..
T Consensus 244 ~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd-~~~~t~~~~Iya~GD~~~~~~l~~~A~~ 322 (464)
T 2eq6_A 244 HVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVN-ARMETSVPGVYAIGDAARPPLLAHKAMR 322 (464)
T ss_dssp EEEEEETTCCSCEEEEESEEEECSCEEESCTTSSHHHHTCCBCTTSCBCCC-TTCBCSSTTEEECGGGTCSSCCHHHHHH
T ss_pred EEEEeecCCCceeEEEcCEEEECCCcccCCCCCChhhcCceecCCCCEEEC-CCcccCCCCEEEEeccCCCcccHHHHHH
Confidence 5555 6 77 89999999999999998443 566677 4568999998 578899999999999997544 6889
Q ss_pred hHHHHHHHHhh
Q 014522 389 DAMRIAQDIGK 399 (423)
Q Consensus 389 ~g~~~a~~i~~ 399 (423)
||+.+|.+|.+
T Consensus 323 ~g~~aa~~i~g 333 (464)
T 2eq6_A 323 EGLIAAENAAG 333 (464)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHhcC
Confidence 99999999986
No 64
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.98 E-value=1.2e-32 Score=272.44 Aligned_cols=299 Identities=15% Similarity=0.155 Sum_probs=194.4
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccc-cCCceeecCC----CccccCCCCCCCCCCCCCCCHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKR-TYDRLNLHLP----KQFCQLPKLQFPEDFPEYPTKR 95 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 95 (423)
.+||+|||||++|+++|..|+++|.+|+|||++. +||+|.+. +.+...+... .....++.+.++.. .......
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~-~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~-~~~~~~~ 85 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA-YGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQVD-RISVNGK 85 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC-SSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECS-EEEECHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC-CCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCC-CCccCHH
Confidence 5899999999999999999999999999999974 78876331 1111000000 00000011100000 0012344
Q ss_pred HHHHHHHHHHHHcC------------CceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCc
Q 014522 96 QFIQYLESYAEKFE------------INPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERV 163 (423)
Q Consensus 96 ~~~~~~~~~~~~~~------------~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~ 163 (423)
.+.+++.+...++. +++. ..... +. +.+.|.+.+ + ..+.||+||+||| +.|.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~g~a~---~~---~~~~v~~~~------~-~~~~~d~lViATG--s~p~ 149 (492)
T 3ic9_A 86 AVMKRIQTERDRFVGFVVESVESFDEQDKI-RGFAK---FL---DEHTLQVDD------H-SQVIAKRIVIATG--SRPN 149 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCGGGEE-ESCEE---EE---ETTEEEETT------T-EEEEEEEEEECCC--EECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCeeEE-EEEEE---Ee---cCCEEEEcC------C-cEEEeCEEEEccC--CCCc
Confidence 44444443333221 1111 11111 11 112366644 4 6899999999999 7888
Q ss_pred CCCCCCCCCCCceeeecCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHH
Q 014522 164 MPDIEGLADFGGEVIHACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATL 243 (423)
Q Consensus 164 ~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~ 243 (423)
.|.+++... ..++++.+.. .....+++++|||+|.+|+|+|..|++.|.+|+++.|.+ .+++..+. +
T Consensus 150 ~p~~~~~~~--~~v~t~~~~~-~~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~-----~---- 216 (492)
T 3ic9_A 150 YPEFLAAAG--SRLLTNDNLF-ELNDLPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSG-SVANLQDE-----E---- 216 (492)
T ss_dssp CCHHHHTTG--GGEECHHHHT-TCSSCCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTT-CCTTCCCH-----H----
T ss_pred CCCCCCccC--CcEEcHHHHh-hhhhcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECC-cccccCCH-----H----
Confidence 876554321 2233332222 233458999999999999999999999999999999998 44444332 1
Q ss_pred HHhhccHHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeCC--e
Q 014522 244 MMKWLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISCG--Q 319 (423)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~--~ 319 (423)
....+.+.+++. |+++.+ +.++..+ +
T Consensus 217 -------------------------------------------------~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~~ 246 (492)
T 3ic9_A 217 -------------------------------------------------MKRYAEKTFNEE-FYFDAKARVISTIEKEDA 246 (492)
T ss_dssp -------------------------------------------------HHHHHHHHHHTT-SEEETTCEEEEEEECSSS
T ss_pred -------------------------------------------------HHHHHHHHHhhC-cEEEECCEEEEEEEcCCE
Confidence 111223344455 888876 6666543 3
Q ss_pred --EEEc--cC--cEecccEEEEcCCCCCCCCCc-cccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccCC---Ccch
Q 014522 320 --AELI--NG--EKLDIDAIVLATGYRSNVPSW-LQESEF-FSENGFPKAPFPHGWKGNAGLYAVGFTRRGLS---GASS 388 (423)
Q Consensus 320 --v~~~--~g--~~~~~D~vi~a~G~~~~~~~l-l~~~~~-~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~---~a~~ 388 (423)
+.+. +| +++++|.||+|+|++|++..+ ++.+++ .+++|++.+|..+++|+.|+|||+|||+.... .|..
T Consensus 247 v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~~t~~~~IyA~GD~~~~~~~~~~A~~ 326 (492)
T 3ic9_A 247 VEVIYFDKSGQKTTESFQYVLAATGRKANVDKLGLENTSIELDKKNSPLFDELTLQTSVDHIFVAGDANNTLTLLHEAAD 326 (492)
T ss_dssp EEEEEECTTCCEEEEEESEEEECSCCEESCSSSCGGGSCCCBCTTCCBCCCTTTCBCSSTTEEECGGGGTSSCSHHHHHH
T ss_pred EEEEEEeCCCceEEEECCEEEEeeCCccCCCCCChhhcCCEECCCCCEeECcccccCCCCCEEEEEecCCCCccHHHHHH
Confidence 4443 67 689999999999999998443 677788 56789999885588899999999999997644 6899
Q ss_pred hHHHHHHHHhhh
Q 014522 389 DAMRIAQDIGKV 400 (423)
Q Consensus 389 ~g~~~a~~i~~~ 400 (423)
||+.+|.+|.+.
T Consensus 327 ~g~~aa~~i~~~ 338 (492)
T 3ic9_A 327 DGKVAGTNAGAY 338 (492)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHcCC
Confidence 999999999863
No 65
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.98 E-value=5.2e-32 Score=268.16 Aligned_cols=306 Identities=17% Similarity=0.133 Sum_probs=194.5
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecC--------CCCCccccccc-CCceeec----------CCCccccCCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERA--------ECIASLWQKRT-YDRLNLH----------LPKQFCQLPK 81 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~--------~~~gg~~~~~~-~~~~~~~----------~~~~~~~~~~ 81 (423)
.|||+||||||+|+.+|..++++|.+|+|||+. ..+||++-+.. .|.-.+. .....+.+..
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi~~ 121 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWKF 121 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCccc
Confidence 589999999999999999999999999999974 34677653311 1100000 0000011100
Q ss_pred CCCCCCCCCCC-CHH----HHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEcc
Q 014522 82 LQFPEDFPEYP-TKR----QFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVAT 156 (423)
Q Consensus 82 ~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAt 156 (423)
.....+|.... ..+ .+..-.....++.++++..+. .. -... ....|......+ +.+.+++|++||||
T Consensus 122 ~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~-a~--f~~~--~~v~V~~~~~~~---~~~~i~a~~iiIAT 193 (542)
T 4b1b_A 122 DNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGL-AK--LKDK--NTVSYYLKGDLS---KEETVTGKYILIAT 193 (542)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEE-EE--EEET--TEEEEEEC--CC---CEEEEEEEEEEECC
T ss_pred CcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeee-EE--EcCC--CcceEeecccCC---ceEEEeeeeEEecc
Confidence 00000111100 011 111122333455577654332 11 1112 443344433221 44789999999999
Q ss_pred CCCCCCcCCCCCCCCCCCceeeecCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCC
Q 014522 157 GENAERVMPDIEGLADFGGEVIHACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKS 236 (423)
Q Consensus 157 G~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~ 236 (423)
| ++|..|+.++... ..+.+++........+++++|||+|++|+|+|..++++|.+||++.|+. ++|.++.
T Consensus 194 G--s~P~~P~~~~~~~---~~~~ts~~~l~l~~lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~--~L~~~D~--- 263 (542)
T 4b1b_A 194 G--CRPHIPDDVEGAK---ELSITSDDIFSLKKDPGKTLVVGASYVALECSGFLNSLGYDVTVAVRSI--VLRGFDQ--- 263 (542)
T ss_dssp C--EEECCCSSSBTHH---HHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSC--SSTTSCH---
T ss_pred C--CCCCCCCcccCCC---ccccCchhhhccccCCceEEEECCCHHHHHHHHHHHhcCCeEEEecccc--cccccch---
Confidence 9 8888875433221 1122333222344568999999999999999999999999999998754 4555543
Q ss_pred hHHHHHHHHhhccHHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceE
Q 014522 237 TFELATLMMKWLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKR 314 (423)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~ 314 (423)
++ ...+.+.+++.+|+++.+ +.+
T Consensus 264 --ei-----------------------------------------------------~~~l~~~l~~~gi~~~~~~~v~~ 288 (542)
T 4b1b_A 264 --QC-----------------------------------------------------AVKVKLYMEEQGVMFKNGILPKK 288 (542)
T ss_dssp --HH-----------------------------------------------------HHHHHHHHHHTTCEEEETCCEEE
T ss_pred --hH-----------------------------------------------------HHHHHHHHHhhcceeecceEEEE
Confidence 22 222344566778888876 555
Q ss_pred EeC--Ce--EEEccCcEecccEEEEcCCCCCCCCCc-cccccc-ccCCCCC-CCCCCCCCCCCCceEEEeeccccC-C--
Q 014522 315 ISC--GQ--AELINGEKLDIDAIVLATGYRSNVPSW-LQESEF-FSENGFP-KAPFPHGWKGNAGLYAVGFTRRGL-S-- 384 (423)
Q Consensus 315 ~~~--~~--v~~~~g~~~~~D~vi~a~G~~~~~~~l-l~~~~~-~~~~g~~-~~~~~~~~~~~~~vya~Gd~~~~~-~-- 384 (423)
+.. ++ +.+.++.++++|.|++|+|++||+..| ++..++ .+..+.+ ++| ++++|+.|+|||+||++++. .
T Consensus 289 ~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~Pnt~~L~le~~gv~~~~~~~~i~vd-~~~~Ts~p~IyAiGDv~~~~p~La 367 (542)
T 4b1b_A 289 LTKMDDKILVEFSDKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIAD-HLSCTNIPSIFAVGDVAENVPELA 367 (542)
T ss_dssp EEEETTEEEEEETTSCEEEESEEEECSCEEESCGGGCGGGTTCCEETTTTEECCC-TTSBCSSTTEEECTTSBTTCCCCH
T ss_pred EEecCCeEEEEEcCCCeEEEEEEEEcccccCCccccCcccceeeecccCceEecc-ccccccCCCeEEeccccCCchhHH
Confidence 543 22 566788899999999999999999655 666677 4555554 566 78999999999999999653 3
Q ss_pred -CcchhHHHHHHHHhhh
Q 014522 385 -GASSDAMRIAQDIGKV 400 (423)
Q Consensus 385 -~a~~~g~~~a~~i~~~ 400 (423)
.|.++|+.++.++.+.
T Consensus 368 ~~A~~eg~~aa~~i~g~ 384 (542)
T 4b1b_A 368 PVAIKAGEILARRLFKD 384 (542)
T ss_dssp HHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 6889999999999874
No 66
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.97 E-value=4.1e-33 Score=271.26 Aligned_cols=287 Identities=18% Similarity=0.146 Sum_probs=198.1
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCC--CEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHH
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGV--PFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQF 97 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~--~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (423)
+.+||+|||||++|+++|..|++.|. +|+|||+.+..+. ....+ +..+.. ... ....+
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~-------~~~~l--~~~~~~--~~~---------~~~~~ 62 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPH-------HLPPL--SKAYLA--GKA---------TAESL 62 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCB-------CSGGG--GTTTTT--TCS---------CSGGG
T ss_pred CCCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCC-------cCCCC--cHHHhC--CCC---------ChHHh
Confidence 45799999999999999999999998 7999999865431 10000 000000 000 00000
Q ss_pred HHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCCCCCC-ce
Q 014522 98 IQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDIEGLADFG-GE 176 (423)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~~~~~-~~ 176 (423)
.....+.+++.+++++.+++|+.++... .. |++.+ + .++.||+||+||| +.|..|.+||.+... ..
T Consensus 63 ~~~~~~~~~~~gv~~~~~~~v~~i~~~~--~~--v~~~~------g-~~~~~d~lviAtG--~~p~~~~i~G~~~~~~~~ 129 (431)
T 1q1r_A 63 YLRTPDAYAAQNIQLLGGTQVTAINRDR--QQ--VILSD------G-RALDYDRLVLATG--GRPRPLPVASGAVGKANN 129 (431)
T ss_dssp BSSCHHHHHHTTEEEECSCCEEEEETTT--TE--EEETT------S-CEEECSEEEECCC--EEECCCGGGTTHHHHSTT
T ss_pred cccCHHHHHhCCCEEEeCCEEEEEECCC--CE--EEECC------C-CEEECCEEEEcCC--CCccCCCCCCcccCCCce
Confidence 0011233456789999999999988644 43 77765 4 5799999999999 788888888864211 00
Q ss_pred eee--cCCC---CCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHhhccHH
Q 014522 177 VIH--ACDY---KSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPLW 251 (423)
Q Consensus 177 ~~~--~~~~---~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (423)
+++ +.+. .......+++++|||+|.+|+|+|..|++.|.+|+++.+.+ .+++...
T Consensus 130 v~~~~~~~d~~~l~~~l~~~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~-~~l~~~~------------------- 189 (431)
T 1q1r_A 130 FRYLRTLEDAECIRRQLIADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAA-RVLERVT------------------- 189 (431)
T ss_dssp EEESSSHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-STTTTTS-------------------
T ss_pred EEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCC-ccccchh-------------------
Confidence 222 1111 01112347899999999999999999999999999999988 3333211
Q ss_pred HHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeC---C----eEEE
Q 014522 252 LVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISC---G----QAEL 322 (423)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~---~----~v~~ 322 (423)
.+.+...+.+.+++.+|+++.+ +.++.. + .+.+
T Consensus 190 --------------------------------------~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~ 231 (431)
T 1q1r_A 190 --------------------------------------APPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLC 231 (431)
T ss_dssp --------------------------------------CHHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEE
T ss_pred --------------------------------------hHHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEe
Confidence 0111112234455568888876 777764 2 3677
Q ss_pred ccCcEecccEEEEcCCCCCCCCCcccccccccCCCCCCCCCCCCCCCCCceEEEeeccccC-------------CCcchh
Q 014522 323 INGEKLDIDAIVLATGYRSNVPSWLQESEFFSENGFPKAPFPHGWKGNAGLYAVGFTRRGL-------------SGASSD 389 (423)
Q Consensus 323 ~~g~~~~~D~vi~a~G~~~~~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~-------------~~a~~~ 389 (423)
.+|+++++|.||+|+|++|++ .+++.+++..++| +.+| .+++|+.|+|||+|||+... ..|..|
T Consensus 232 ~~G~~i~~D~Vv~a~G~~p~~-~l~~~~gl~~~~g-i~Vd-~~~~ts~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~q 308 (431)
T 1q1r_A 232 EDGTRLPADLVIAGIGLIPNC-ELASAAGLQVDNG-IVIN-EHMQTSDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQ 308 (431)
T ss_dssp TTSCEEECSEEEECCCEEECC-HHHHHTTCCBSSS-EECC-TTSBCSSTTEEECGGGEEEEETTTTEEEECCSHHHHHHH
T ss_pred CCCCEEEcCEEEECCCCCcCc-chhhccCCCCCCC-EEEC-CCcccCCCCEEEEEeEEEEccccCCceEeeCHHHHHHHH
Confidence 899999999999999999997 6788888855566 7777 47889999999999998642 248899
Q ss_pred HHHHHHHHhhh
Q 014522 390 AMRIAQDIGKV 400 (423)
Q Consensus 390 g~~~a~~i~~~ 400 (423)
|+.+|.+|.+.
T Consensus 309 g~~aa~~i~g~ 319 (431)
T 1q1r_A 309 ARKIAAILCGK 319 (431)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHhcCC
Confidence 99999999864
No 67
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.97 E-value=3.2e-32 Score=268.10 Aligned_cols=302 Identities=16% Similarity=0.168 Sum_probs=200.6
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccC-Cceee-cCCCc---cccCCCC-CCCCCCCCCCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTY-DRLNL-HLPKQ---FCQLPKL-QFPEDFPEYPT 93 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~-~~~~~-~~~~~---~~~~~~~-~~~~~~~~~~~ 93 (423)
..+||+|||||++|+++|..|++.|.+|+|||+. .+||+|.+..+ +...+ ..... ....+.. ..+..... ..
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~~-~~ 80 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPT-ID 80 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCCC-CC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCCc-cC
Confidence 3679999999999999999999999999999998 78888764211 00000 00000 0001111 00000011 11
Q ss_pred HHHH-------HHHHH-----HHHHHc-CCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCC
Q 014522 94 KRQF-------IQYLE-----SYAEKF-EINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENA 160 (423)
Q Consensus 94 ~~~~-------~~~~~-----~~~~~~-~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~ 160 (423)
...+ .+++. +..++. +++++.+ ++..++ . ..+.|.+.+ +....+.||+||+||| +
T Consensus 81 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g-~~~~~~--~--~~~~v~~~~-----g~~~~~~~d~lviAtG--s 148 (467)
T 1zk7_A 81 RSKLLAQQQARVDELRHAKYEGILGGNPAITVVHG-EARFKD--D--QSLTVRLNE-----GGERVVMFDRCLVATG--A 148 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEE-EEEEEE--T--TEEEEEETT-----SSEEEEECSEEEECCC--E
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEE-EEEEcc--C--CEEEEEeCC-----CceEEEEeCEEEEeCC--C
Confidence 2222 22222 233344 6665554 354443 2 566666654 1225799999999999 7
Q ss_pred CCcCCCCCCCCCCCceeeecCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHH
Q 014522 161 ERVMPDIEGLADFGGEVIHACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFEL 240 (423)
Q Consensus 161 ~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~ 240 (423)
.|..|.+||++... +++..+... ....+++++|||+|.+|+|+|..|++.|.+|+++.+.+ .++| .+.
T Consensus 149 ~p~~p~i~G~~~~~--~~~~~~~~~-~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~-~~~------- 216 (467)
T 1zk7_A 149 SPAVPPIPGLKESP--YWTSTEALA-SDTIPERLAVIGSSVVALELAQAFARLGSKVTVLARNT-LFFR-EDP------- 216 (467)
T ss_dssp EECCCCCTTTTTSC--CBCHHHHHH-CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC-TTTT-SCH-------
T ss_pred CCCCCCCCCCCcCc--eecHHHHhc-ccccCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECC-ccCC-CCH-------
Confidence 88888898875431 222222211 22347899999999999999999999999999999988 4444 221
Q ss_pred HHHHHhhccHHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeCC
Q 014522 241 ATLMMKWLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISCG 318 (423)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~ 318 (423)
.....+.+.+++.+|+++.+ +.++..+
T Consensus 217 ---------------------------------------------------~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~ 245 (467)
T 1zk7_A 217 ---------------------------------------------------AIGEAVTAAFRAEGIEVLEHTQASQVAHM 245 (467)
T ss_dssp ---------------------------------------------------HHHHHHHHHHHHTTCEEETTCCEEEEEEE
T ss_pred ---------------------------------------------------HHHHHHHHHHHhCCCEEEcCCEEEEEEEe
Confidence 11112344456678898876 6666532
Q ss_pred --e--EEEccCcEecccEEEEcCCCCCCCCCc-cccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccCC---Ccchh
Q 014522 319 --Q--AELINGEKLDIDAIVLATGYRSNVPSW-LQESEF-FSENGFPKAPFPHGWKGNAGLYAVGFTRRGLS---GASSD 389 (423)
Q Consensus 319 --~--v~~~~g~~~~~D~vi~a~G~~~~~~~l-l~~~~~-~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~---~a~~~ 389 (423)
. +.++ +.++++|.||+|+|+.|+...+ ++..++ .+++|++.+| ++++|+.|+|||+|||+.... .|..|
T Consensus 246 ~~~~~v~~~-~~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd-~~~~t~~~~iya~GD~~~~~~~~~~A~~~ 323 (467)
T 1zk7_A 246 DGEFVLTTT-HGELRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVID-QGMRTSNPNIYAAGDCTDQPQFVYVAAAA 323 (467)
T ss_dssp TTEEEEEET-TEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCC-TTCBCSSTTEEECSTTBSSCCCHHHHHHH
T ss_pred CCEEEEEEC-CcEEEcCEEEECCCCCcCCCcCCchhcCCcCCCCCCEEEC-CCcccCCCCEEEEeccCCCcccHHHHHHH
Confidence 2 3443 5689999999999999998443 567777 4568989888 578899999999999997544 68999
Q ss_pred HHHHHHHHhhh
Q 014522 390 AMRIAQDIGKV 400 (423)
Q Consensus 390 g~~~a~~i~~~ 400 (423)
|+.+|.+|.+.
T Consensus 324 g~~aa~~i~~~ 334 (467)
T 1zk7_A 324 GTRAAINMTGG 334 (467)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHcCC
Confidence 99999999863
No 68
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.97 E-value=1.3e-31 Score=262.80 Aligned_cols=298 Identities=20% Similarity=0.217 Sum_probs=199.9
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccC-CceeecCCC----ccccCCCCCCCCCCCCCCCHHH
Q 014522 22 NGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTY-DRLNLHLPK----QFCQLPKLQFPEDFPEYPTKRQ 96 (423)
Q Consensus 22 ~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 96 (423)
+||+|||||++|+++|..|++.|.+|+|||+.+.+||+|....+ +...+.... .... ..+..+..... .....
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~-~~~g~~~~~~~-~~~~~ 79 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKK-GLLGAKVKGVE-LDLPA 79 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHH-CCTTEEECCEE-ECHHH
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhh-hcCCcccCCCc-cCHHH
Confidence 68999999999999999999999999999999889998754211 100000000 0000 00000000000 11111
Q ss_pred -----------HHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCC
Q 014522 97 -----------FIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMP 165 (423)
Q Consensus 97 -----------~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p 165 (423)
+...+...+++.+++++.++.+. + + ...+.|.+ + + ..+.||+||+||| +.|..|
T Consensus 80 ~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~-i--~--~~~~~v~~-~------g-~~~~~d~lviAtG--~~p~~~ 144 (455)
T 2yqu_A 80 LMAHKDKVVQANTQGVEFLFKKNGIARHQGTARF-L--S--ERKVLVEE-T------G-EELEARYILIATG--SAPLIP 144 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEE-S--S--SSEEEETT-T------C-CEEEEEEEEECCC--EEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-e--c--CCeEEEee-C------C-EEEEecEEEECCC--CCCCCC
Confidence 22223455666788877766432 1 2 24543433 2 4 5799999999999 788888
Q ss_pred CCCCCCCCCceeeecCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHH
Q 014522 166 DIEGLADFGGEVIHACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMM 245 (423)
Q Consensus 166 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~ 245 (423)
.++|.+.. .+++..+... ....+++++|||+|.+|+|+|..|++.|.+|+++.+.+ .++|.... ++.
T Consensus 145 ~~~g~~~~--~v~~~~~~~~-~~~~~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~-~~l~~~~~-----~~~---- 211 (455)
T 2yqu_A 145 PWAQVDYE--RVVTSTEALS-FPEVPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMD-RILPTMDL-----EVS---- 211 (455)
T ss_dssp TTBCCCSS--SEECHHHHTC-CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSCTTSCH-----HHH----
T ss_pred CCCCCCcC--cEechHHhhc-cccCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCC-ccccccCH-----HHH----
Confidence 77775431 2333333332 22346899999999999999999999999999999988 44453321 111
Q ss_pred hhccHHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeC--Ce--
Q 014522 246 KWLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISC--GQ-- 319 (423)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~--~~-- 319 (423)
..+.+.+++.+|+++.+ +.++.. ++
T Consensus 212 -------------------------------------------------~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~ 242 (455)
T 2yqu_A 212 -------------------------------------------------RAAERVFKKQGLTIRTGVRVTAVVPEAKGAR 242 (455)
T ss_dssp -------------------------------------------------HHHHHHHHHHTCEEECSCCEEEEEEETTEEE
T ss_pred -------------------------------------------------HHHHHHHHHCCCEEEECCEEEEEEEeCCEEE
Confidence 11233344567888876 666653 23
Q ss_pred EEEccCcEecccEEEEcCCCCCCCCCc-cccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccCC---CcchhHHHHH
Q 014522 320 AELINGEKLDIDAIVLATGYRSNVPSW-LQESEF-FSENGFPKAPFPHGWKGNAGLYAVGFTRRGLS---GASSDAMRIA 394 (423)
Q Consensus 320 v~~~~g~~~~~D~vi~a~G~~~~~~~l-l~~~~~-~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~---~a~~~g~~~a 394 (423)
+.+++|+++++|.||+|+|.+|+...+ ++..++ .+++|++.+| .+++|+.|+|||+|||+.... .|..||+.+|
T Consensus 243 v~~~~g~~i~~D~vv~A~G~~p~~~~l~~~~~g~~~~~~g~i~vd-~~~~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa 321 (455)
T 2yqu_A 243 VELEGGEVLEADRVLVAVGRRPYTEGLSLENAGLSTDERGRIPVD-EHLRTRVPHIYAIGDVVRGPMLAHKASEEGIAAV 321 (455)
T ss_dssp EEETTSCEEEESEEEECSCEEECCTTCCGGGGTCCCCTTSCCCCC-TTSBCSSTTEEECGGGSSSCCCHHHHHHHHHHHH
T ss_pred EEECCCeEEEcCEEEECcCCCcCCCCCChhhcCCccCCCCcEeEC-CCcccCCCCEEEEecCCCCccCHHHHHHhHHHHH
Confidence 445588899999999999999998433 567777 4557888888 578899999999999997654 5889999999
Q ss_pred HHHhh
Q 014522 395 QDIGK 399 (423)
Q Consensus 395 ~~i~~ 399 (423)
.+|.+
T Consensus 322 ~~i~~ 326 (455)
T 2yqu_A 322 EHMVR 326 (455)
T ss_dssp HHHHH
T ss_pred HHHcC
Confidence 99986
No 69
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.97 E-value=6.7e-32 Score=266.88 Aligned_cols=304 Identities=18% Similarity=0.129 Sum_probs=196.7
Q ss_pred cccCCeEEECCChHHHHHHHHHHHcCCCEEEEecC---C------CCCcccccccC-CceeecCCC----ccccCCCCCC
Q 014522 19 IWVNGPVIVGAGPSGLATAACLRDQGVPFVMLERA---E------CIASLWQKRTY-DRLNLHLPK----QFCQLPKLQF 84 (423)
Q Consensus 19 ~~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~---~------~~gg~~~~~~~-~~~~~~~~~----~~~~~~~~~~ 84 (423)
.+.+||+|||||++|+++|..|+++|.+|+|||+. + .+||+|....+ +...+..+. .......+.+
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~g~ 86 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGW 86 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTB
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhcCc
Confidence 46789999999999999999999999999999942 1 37887754211 100000000 0000000000
Q ss_pred CCCCCCCCCHHHHHHHHHH-----------HHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEE
Q 014522 85 PEDFPEYPTKRQFIQYLES-----------YAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLV 153 (423)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vv 153 (423)
+...........+.++... ..+..++++..+. +.-+ +. ..+.+.+.+ +...+.||+||
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~-a~~~--~~--~~v~v~~~~------g~~~~~~d~lv 155 (483)
T 3dgh_A 87 NVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGL-GSFV--DS--HTLLAKLKS------GERTITAQTFV 155 (483)
T ss_dssp CCCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSE-EEEE--ET--TEEEEECTT------CCEEEEEEEEE
T ss_pred ccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEc--cC--CEEEEEeCC------CeEEEEcCEEE
Confidence 0000111233333333222 2344566644332 3222 22 455555544 33689999999
Q ss_pred EccCCCCCCcCCCCCCCCCCCceeeecCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeeccccc
Q 014522 154 VATGENAERVMPDIEGLADFGGEVIHACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREIL 233 (423)
Q Consensus 154 iAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~ 233 (423)
+||| +.|..|.+||.... .+++.+.. .....+++++|||+|.+|+|+|..|++.|.+|+++.|+. +++..+.
T Consensus 156 iATG--s~p~~p~i~G~~~~---~~~~~~~~-~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~--~l~~~d~ 227 (483)
T 3dgh_A 156 IAVG--GRPRYPDIPGAVEY---GITSDDLF-SLDREPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSI--VLRGFDQ 227 (483)
T ss_dssp ECCC--EEECCCSSTTHHHH---CBCHHHHT-TCSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC--SSTTSCH
T ss_pred EeCC--CCcCCCCCCCcccc---cCcHHHHh-hhhhcCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC--CCcccCH
Confidence 9999 88888888887532 12222222 233457899999999999999999999999999998853 3333321
Q ss_pred CCChHHHHHHHHhhccHHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--
Q 014522 234 GKSTFELATLMMKWLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG-- 311 (423)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-- 311 (423)
.....+.+.+++.+|+++.+
T Consensus 228 ----------------------------------------------------------~~~~~l~~~l~~~Gv~i~~~~~ 249 (483)
T 3dgh_A 228 ----------------------------------------------------------QMAELVAASMEERGIPFLRKTV 249 (483)
T ss_dssp ----------------------------------------------------------HHHHHHHHHHHHTTCCEEETEE
T ss_pred ----------------------------------------------------------HHHHHHHHHHHhCCCEEEeCCE
Confidence 11122344456678888877
Q ss_pred ceEEeC--Ce---EEEccCc-----EecccEEEEcCCCCCCCCCc-ccccccccCCCCCCCCCCCCCCCCCceEEEeecc
Q 014522 312 IKRISC--GQ---AELINGE-----KLDIDAIVLATGYRSNVPSW-LQESEFFSENGFPKAPFPHGWKGNAGLYAVGFTR 380 (423)
Q Consensus 312 i~~~~~--~~---v~~~~g~-----~~~~D~vi~a~G~~~~~~~l-l~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~ 380 (423)
+.++.. ++ +.+.++. ++++|.||+|+|++|++..+ ++..++..+.|++.+| .+++|+.|+|||+|||+
T Consensus 250 v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~G~i~vd-~~~~t~~~~IyA~GD~~ 328 (483)
T 3dgh_A 250 PLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQKDKIPVD-SQEATNVANIYAVGDII 328 (483)
T ss_dssp EEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEECCGGGTGGGTTCCCBTTBBCCC-TTCBCSSTTEEECSTTB
T ss_pred EEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcccccCcCcCCchhcCccccCCEEEEC-cCCccCCCCEEEEEccc
Confidence 666663 22 6666654 79999999999999998433 4777873333999998 57889999999999997
Q ss_pred c-cCC---CcchhHHHHHHHHhhh
Q 014522 381 R-GLS---GASSDAMRIAQDIGKV 400 (423)
Q Consensus 381 ~-~~~---~a~~~g~~~a~~i~~~ 400 (423)
. .+. .|..||+.+|.+|.+.
T Consensus 329 ~~~~~~~~~A~~~g~~aa~~i~g~ 352 (483)
T 3dgh_A 329 YGKPELTPVAVLAGRLLARRLYGG 352 (483)
T ss_dssp TTSCCCHHHHHHHHHHHHHHHHSC
T ss_pred CCCCccHHHHHHHHHHHHHHHcCC
Confidence 4 232 6899999999999864
No 70
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.97 E-value=3.4e-32 Score=270.73 Aligned_cols=304 Identities=16% Similarity=0.136 Sum_probs=194.7
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC--------CCCcccccccC-CceeecCCCc----cccCCCCCCCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE--------CIASLWQKRTY-DRLNLHLPKQ----FCQLPKLQFPE 86 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~--------~~gg~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~ 86 (423)
..+||+|||||++|+++|..|++.|.+|+|||+.+ .+||+|....+ +...+..+.. ......+.++.
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~~ 110 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKV 110 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCccc
Confidence 36899999999999999999999999999999854 67887654211 1100000000 00000000000
Q ss_pred CCCCCCCHHHHHHHHH-----------HHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEc
Q 014522 87 DFPEYPTKRQFIQYLE-----------SYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVA 155 (423)
Q Consensus 87 ~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviA 155 (423)
..........+.++.. ...+..++++..+. +..++ . ..+.|.+.+ + +..++.||+||+|
T Consensus 111 ~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~-a~~~d--~--~~v~v~~~~--g---~~~~i~~d~lViA 180 (519)
T 3qfa_A 111 EETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAY-GQFIG--P--HRIKATNNK--G---KEKIYSAERFLIA 180 (519)
T ss_dssp CSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSE-EEEEE--T--TEEEEECTT--C---CCCEEEEEEEEEC
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEEee--C--CEEEEEcCC--C---CEEEEECCEEEEE
Confidence 0011122233333322 23344566654433 43332 2 444454433 1 2258999999999
Q ss_pred cCCCCCCcCCCCCCCCCCCceeeecCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCC
Q 014522 156 TGENAERVMPDIEGLADFGGEVIHACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGK 235 (423)
Q Consensus 156 tG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~ 235 (423)
|| +.|..|.+||...+ .+++.+... ....+++++|||+|.+|+|+|..|++.|.+|+++.|+ .+++..+.
T Consensus 181 TG--s~p~~p~i~G~~~~---~~t~~~~~~-l~~~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~--~~l~~~d~-- 250 (519)
T 3qfa_A 181 TG--ERPRYLGIPGDKEY---CISSDDLFS-LPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRS--ILLRGFDQ-- 250 (519)
T ss_dssp CC--EEECCCCCTTHHHH---CBCHHHHTT-CSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS--CSSTTSCH--
T ss_pred CC--CCcCCCCCCCccCc---eEcHHHHhh-hhhcCCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc--cccccCCH--
Confidence 99 88888888886532 222222222 2345678999999999999999999999999999985 34443321
Q ss_pred ChHHHHHHHHhhccHHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ce
Q 014522 236 STFELATLMMKWLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IK 313 (423)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~ 313 (423)
.....+.+.+++.+|+++.+ +.
T Consensus 251 --------------------------------------------------------~~~~~~~~~l~~~GV~v~~~~~v~ 274 (519)
T 3qfa_A 251 --------------------------------------------------------DMANKIGEHMEEHGIKFIRQFVPI 274 (519)
T ss_dssp --------------------------------------------------------HHHHHHHHHHHHTTCEEEESEEEE
T ss_pred --------------------------------------------------------HHHHHHHHHHHHCCCEEEeCCeEE
Confidence 11122344456678888876 33
Q ss_pred EEe---C---CeEE----EccCc---EecccEEEEcCCCCCCCCCc-cccccc-cc-CCCCCCCCCCCCCCCCCceEEEe
Q 014522 314 RIS---C---GQAE----LINGE---KLDIDAIVLATGYRSNVPSW-LQESEF-FS-ENGFPKAPFPHGWKGNAGLYAVG 377 (423)
Q Consensus 314 ~~~---~---~~v~----~~~g~---~~~~D~vi~a~G~~~~~~~l-l~~~~~-~~-~~g~~~~~~~~~~~~~~~vya~G 377 (423)
++. . +++. ..+|. ++++|.||+|+|++|++..+ ++..++ .+ ++|++.+| .+++|+.|+|||+|
T Consensus 275 ~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~~G~I~Vd-~~~~Ts~~~IyA~G 353 (519)
T 3qfa_A 275 KVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVT-DEEQTNVPYIYAIG 353 (519)
T ss_dssp EEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEESCSSSCSTTTTCCCCTTTCCBCCC-TTSBCSSTTEEECG
T ss_pred EEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcccCCCCChhhcCcEEcCCCCeEeeC-CCCccCCCCEEEEE
Confidence 333 2 2222 23552 57899999999999998544 777787 44 47999999 57889999999999
Q ss_pred ecc-ccCC---CcchhHHHHHHHHhhh
Q 014522 378 FTR-RGLS---GASSDAMRIAQDIGKV 400 (423)
Q Consensus 378 d~~-~~~~---~a~~~g~~~a~~i~~~ 400 (423)
||+ +... .|..||+++|.+|.+.
T Consensus 354 D~~~g~~~~~~~A~~~g~~aa~~i~g~ 380 (519)
T 3qfa_A 354 DILEDKVELTPVAIQAGRLLAQRLYAG 380 (519)
T ss_dssp GGBSSSCCCHHHHHHHHHHHHHHHHSC
T ss_pred eccCCCCccHHHHHHHHHHHHHHHcCC
Confidence 998 4333 6889999999999853
No 71
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.97 E-value=4.7e-32 Score=265.95 Aligned_cols=295 Identities=19% Similarity=0.229 Sum_probs=197.7
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccC-Cceeec-CC---CccccCCC---CCCCCCCCCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTY-DRLNLH-LP---KQFCQLPK---LQFPEDFPEY 91 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~-~~~~~~-~~---~~~~~~~~---~~~~~~~~~~ 91 (423)
.++||+|||||++|+++|..|++.|.+|+|||+ +..||+|....+ +...+. .. ........ +..+.. ...
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~-~~~ 81 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVA-SPR 81 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCC-CCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccC-CCc
Confidence 468999999999999999999999999999999 678888754211 110000 00 00000000 111100 001
Q ss_pred CCHHHHHH-----------HHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCC
Q 014522 92 PTKRQFIQ-----------YLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENA 160 (423)
Q Consensus 92 ~~~~~~~~-----------~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~ 160 (423)
.....+.. .+...+++.+++++.++.+. + +. .. |.+.+ ..+.||+||+||| +
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~-~--~~--~~--v~v~~--------~~~~~d~lviATG--s 144 (458)
T 1lvl_A 82 LDIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKV-L--DG--KQ--VEVDG--------QRIQCEHLLLATG--S 144 (458)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEE-E--ET--TE--EEETT--------EEEECSEEEECCC--E
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEE-c--cC--CE--EEEee--------EEEEeCEEEEeCC--C
Confidence 12222222 23455667788887777543 2 22 33 66643 5799999999999 6
Q ss_pred CCcCCC-CCCCCCCCceeeecCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHH
Q 014522 161 ERVMPD-IEGLADFGGEVIHACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFE 239 (423)
Q Consensus 161 ~~~~p~-~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~ 239 (423)
.|..|+ ++ .+ ..+++..+... ....+++++|||+|.+|+|+|..|++.|.+|+++.+.+ .++|.... +
T Consensus 145 ~p~~~~~~~-~~---~~v~~~~~~~~-~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~-----~ 213 (458)
T 1lvl_A 145 SSVELPMLP-LG---GPVISSTEALA-PKALPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARE-RILPTYDS-----E 213 (458)
T ss_dssp EECCBTTBC-CB---TTEECHHHHTC-CSSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS-SSSTTSCH-----H
T ss_pred CCCCCCCCC-cc---CcEecHHHHhh-hhccCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCC-ccccccCH-----H
Confidence 776554 44 22 13344433332 22357899999999999999999999999999999998 45453221 1
Q ss_pred HHHHHHhhccHHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeC
Q 014522 240 LATLMMKWLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISC 317 (423)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~ 317 (423)
+ ...+.+.+++.+|+++.+ +.++..
T Consensus 214 ~-----------------------------------------------------~~~l~~~l~~~gv~i~~~~~v~~i~~ 240 (458)
T 1lvl_A 214 L-----------------------------------------------------TAPVAESLKKLGIALHLGHSVEGYEN 240 (458)
T ss_dssp H-----------------------------------------------------HHHHHHHHHHHTCEEETTCEEEEEET
T ss_pred H-----------------------------------------------------HHHHHHHHHHCCCEEEECCEEEEEEe
Confidence 1 111233445568888877 777776
Q ss_pred CeEEEc--cC--cEecccEEEEcCCCCCCCCCc-ccccccc-cCCCCCCCCCCCCCCCCCceEEEeeccccCC---Ccch
Q 014522 318 GQAELI--NG--EKLDIDAIVLATGYRSNVPSW-LQESEFF-SENGFPKAPFPHGWKGNAGLYAVGFTRRGLS---GASS 388 (423)
Q Consensus 318 ~~v~~~--~g--~~~~~D~vi~a~G~~~~~~~l-l~~~~~~-~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~---~a~~ 388 (423)
+++.+. +| +++++|.||+|+|++|+...+ ++..++. +++ .+.+| .+++|+.|+|||+|||+.... .|..
T Consensus 241 ~~v~v~~~~G~~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~-~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~~A~~ 318 (458)
T 1lvl_A 241 GCLLANDGKGGQLRLEADRVLVAVGRRPRTKGFNLECLDLKMNGA-AIAID-ERCQTSMHNVWAIGDVAGEPMLAHRAMA 318 (458)
T ss_dssp TEEEEECSSSCCCEECCSCEEECCCEEECCSSSSGGGSCCCEETT-EECCC-TTCBCSSTTEEECGGGGCSSCCHHHHHH
T ss_pred CCEEEEECCCceEEEECCEEEECcCCCcCCCCCCcHhcCCcccCC-EEeEC-CCCcCCCCCEEEeeccCCCcccHHHHHH
Confidence 435444 56 689999999999999998443 5777773 445 77788 478899999999999997644 6899
Q ss_pred hHHHHHHHHhh
Q 014522 389 DAMRIAQDIGK 399 (423)
Q Consensus 389 ~g~~~a~~i~~ 399 (423)
||+.+|.+|.+
T Consensus 319 ~g~~aa~~i~g 329 (458)
T 1lvl_A 319 QGEMVAEIIAG 329 (458)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHhcC
Confidence 99999999986
No 72
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.97 E-value=3.6e-32 Score=266.62 Aligned_cols=290 Identities=18% Similarity=0.223 Sum_probs=200.0
Q ss_pred CCeEEECCChHHHHHHHHHHHc--CCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHH
Q 014522 22 NGPVIVGAGPSGLATAACLRDQ--GVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQ 99 (423)
Q Consensus 22 ~~vvIIGaG~aGl~~A~~L~~~--g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (423)
+||+|||||++|+++|..|++. |.+|+|||+.+..+..... +........... ....+..
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~-----~~~~~~g~~~~~-------------~~~~~~~ 62 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCG-----IALYLGKEIKNN-------------DPRGLFY 62 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGG-----HHHHHTTCBGGG-------------CGGGGBS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCccccc-----chhhhcCCcccC-------------CHHHhhh
Confidence 4899999999999999999999 9999999998755421110 000000000000 0000111
Q ss_pred HHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCCCCCCceeee
Q 014522 100 YLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDIEGLADFGGEVIH 179 (423)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~~~~~~~~~~ 179 (423)
.+.+.+.+.+++++.+++|..++... +.+.+.... + +....+.||+||+||| +.|..|.+||.+.. .+++
T Consensus 63 ~~~~~~~~~gv~~~~~~~v~~i~~~~--~~v~v~~~~-~---g~~~~~~~d~lviAtG--s~p~~p~i~g~~~~--~v~~ 132 (452)
T 2cdu_A 63 SSPEELSNLGANVQMRHQVTNVDPET--KTIKVKDLI-T---NEEKTEAYDKLIMTTG--SKPTVPPIPGIDSS--RVYL 132 (452)
T ss_dssp CCHHHHHHTTCEEEESEEEEEEEGGG--TEEEEEETT-T---CCEEEEECSEEEECCC--EEECCCCCTTTTST--TEEE
T ss_pred cCHHHHHHcCCEEEeCCEEEEEEcCC--CEEEEEecC-C---CceEEEECCEEEEccC--CCcCCCCCCCCCCC--CEEE
Confidence 12334456789988999999987655 564444321 1 0236899999999999 78888888887532 2333
Q ss_pred cCCCCC-----CCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHhhccHHHHH
Q 014522 180 ACDYKS-----GEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPLWLVD 254 (423)
Q Consensus 180 ~~~~~~-----~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (423)
...+.+ .....+++++|||+|.+|+|+|..|++.|.+|+++.+.+ .+++...
T Consensus 133 ~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~---------------------- 189 (452)
T 2cdu_A 133 CKNYNDAKKLFEEAPKAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHE-RVLYKYF---------------------- 189 (452)
T ss_dssp CSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS-STTTTTS----------------------
T ss_pred eCcHHHHHHHHHHhccCCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCC-chhhhhh----------------------
Confidence 222111 112357899999999999999999999999999999988 4434111
Q ss_pred HHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeC--CeE--EEccCcEe
Q 014522 255 KILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISC--GQA--ELINGEKL 328 (423)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~--~~v--~~~~g~~~ 328 (423)
.+.+...+.+.+++.+|+++.+ +.++.. +++ ...+|+++
T Consensus 190 -----------------------------------~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~~g~~i 234 (452)
T 2cdu_A 190 -----------------------------------DKEFTDILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTLDGKEI 234 (452)
T ss_dssp -----------------------------------CHHHHHHHHHHHHHTTCEEEESSCEEEEEEETTEEEEEETTSCEE
T ss_pred -----------------------------------hhhHHHHHHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEeCCCEE
Confidence 1111122344566778998876 777764 333 23478899
Q ss_pred cccEEEEcCCCCCCCCCccccccc-ccCCCCCCCCCCCCCCCCCceEEEeecccc-------------CCCcchhHHHHH
Q 014522 329 DIDAIVLATGYRSNVPSWLQESEF-FSENGFPKAPFPHGWKGNAGLYAVGFTRRG-------------LSGASSDAMRIA 394 (423)
Q Consensus 329 ~~D~vi~a~G~~~~~~~ll~~~~~-~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~-------------~~~a~~~g~~~a 394 (423)
++|.||+|+|++|++ .+++.. + .+++|++.+| .+++|+.|+|||+|||+.. ...|..||+.+|
T Consensus 235 ~~D~vv~a~G~~p~~-~ll~~~-l~~~~~G~i~Vd-~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa 311 (452)
T 2cdu_A 235 KSDIAILCIGFRPNT-ELLKGK-VAMLDNGAIITD-EYMHSSNRDIFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLVG 311 (452)
T ss_dssp EESEEEECCCEEECC-GGGTTT-SCBCTTSCBCCC-TTSBCSSTTEEECSTTBCEEETTTTEEECCCCHHHHHHHHHHHH
T ss_pred ECCEEEECcCCCCCH-HHHHHh-hhcCCCCCEEEC-CCcCcCCCCEEEcceEEEeccccCCCeeecchHHHHHHHHHHHH
Confidence 999999999999998 577766 6 4568999999 5789999999999999863 126899999999
Q ss_pred HHHhhh
Q 014522 395 QDIGKV 400 (423)
Q Consensus 395 ~~i~~~ 400 (423)
.+|.+.
T Consensus 312 ~~i~g~ 317 (452)
T 2cdu_A 312 LNLTED 317 (452)
T ss_dssp HTSSSC
T ss_pred HHhCCC
Confidence 999863
No 73
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.97 E-value=4.2e-32 Score=268.55 Aligned_cols=305 Identities=14% Similarity=0.089 Sum_probs=197.7
Q ss_pred cccCCeEEECCChHHHHHHHHHHHcCCCEEEEec--------CCCCCcccccccC-CceeecCCC----ccccCCCCCCC
Q 014522 19 IWVNGPVIVGAGPSGLATAACLRDQGVPFVMLER--------AECIASLWQKRTY-DRLNLHLPK----QFCQLPKLQFP 85 (423)
Q Consensus 19 ~~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~--------~~~~gg~~~~~~~-~~~~~~~~~----~~~~~~~~~~~ 85 (423)
.+.+||+|||||++|+++|..|++.|.+|+|||+ ...+||+|....+ +...+.... .......+.+.
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~ 83 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWE 83 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCcc
Confidence 3578999999999999999999999999999997 4568888754211 110000000 00000000000
Q ss_pred CCCCCCCCHHHHHHHH-----------HHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEE
Q 014522 86 EDFPEYPTKRQFIQYL-----------ESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVV 154 (423)
Q Consensus 86 ~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vvi 154 (423)
...........+..+. .....+.++++..+ .+..+ +...+.|.+.+ ++...+.||+||+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g-~~~~~----~~~~v~v~~~~-----g~~~~~~~d~lVi 153 (488)
T 3dgz_A 84 VAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNI-KASFV----DEHTVRGVDKG-----GKATLLSAEHIVI 153 (488)
T ss_dssp CCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECC-EEEES----SSSEEEEECTT-----SCEEEEEEEEEEE
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEc----cCCeEEEEeCC-----CceEEEECCEEEE
Confidence 0001112323333332 22334456664333 23222 12454454433 1336899999999
Q ss_pred ccCCCCCCcCCC-CCCCCCCCceeeecCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeeccccc
Q 014522 155 ATGENAERVMPD-IEGLADFGGEVIHACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREIL 233 (423)
Q Consensus 155 AtG~~~~~~~p~-~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~ 233 (423)
||| +.|..|. +||.... .+++.+.. .....+++++|||+|.+|+|+|..|++.|.+|+++.|.+ +++..+.
T Consensus 154 ATG--s~p~~p~~i~G~~~~---~~~~~~~~-~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~--~l~~~d~ 225 (488)
T 3dgz_A 154 ATG--GRPRYPTQVKGALEY---GITSDDIF-WLKESPGKTLVVGASYVALECAGFLTGIGLDTTVMMRSI--PLRGFDQ 225 (488)
T ss_dssp CCC--EEECCCSSCBTHHHH---CBCHHHHT-TCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC--SSTTSCH
T ss_pred cCC--CCCCCCCCCCCcccc---cCcHHHHH-hhhhcCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCc--ccccCCH
Confidence 999 8888888 8887432 12222222 223456789999999999999999999999999999864 3333221
Q ss_pred CCChHHHHHHHHhhccHHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--
Q 014522 234 GKSTFELATLMMKWLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG-- 311 (423)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-- 311 (423)
.+...+.+.+++.+|+++.+
T Consensus 226 ----------------------------------------------------------~~~~~l~~~l~~~gv~~~~~~~ 247 (488)
T 3dgz_A 226 ----------------------------------------------------------QMSSLVTEHMESHGTQFLKGCV 247 (488)
T ss_dssp ----------------------------------------------------------HHHHHHHHHHHHTTCEEEETEE
T ss_pred ----------------------------------------------------------HHHHHHHHHHHHCCCEEEeCCE
Confidence 11122344566678888877
Q ss_pred ceEEeC--Ce---EEEcc---Cc--EecccEEEEcCCCCCCCCCc-cccccc-cc-CCCCCCCCCCCCCCCCCceEEEee
Q 014522 312 IKRISC--GQ---AELIN---GE--KLDIDAIVLATGYRSNVPSW-LQESEF-FS-ENGFPKAPFPHGWKGNAGLYAVGF 378 (423)
Q Consensus 312 i~~~~~--~~---v~~~~---g~--~~~~D~vi~a~G~~~~~~~l-l~~~~~-~~-~~g~~~~~~~~~~~~~~~vya~Gd 378 (423)
+.++.. ++ +.+.+ |+ ++++|.||+|+|++|++..+ ++..++ .+ ++|++.+| .+++|+.|+|||+||
T Consensus 248 v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~~G~i~vd-~~~~t~~~~IyA~GD 326 (488)
T 3dgz_A 248 PSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKIIVD-AQEATSVPHIYAIGD 326 (488)
T ss_dssp EEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEESCGGGTGGGGTCCBCSSSCCBCCC-TTSBCSSTTEEECGG
T ss_pred EEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCcccCcCCccccCcEecCCCCeEeEC-CCCccCCCCEEEeEE
Confidence 666653 22 44544 55 57999999999999998444 677777 55 68999998 688899999999999
Q ss_pred ccc-cCC---CcchhHHHHHHHHhhh
Q 014522 379 TRR-GLS---GASSDAMRIAQDIGKV 400 (423)
Q Consensus 379 ~~~-~~~---~a~~~g~~~a~~i~~~ 400 (423)
|+. ... .|..||+.+|.+|.+.
T Consensus 327 ~~~~~~~~~~~A~~~g~~aa~~i~g~ 352 (488)
T 3dgz_A 327 VAEGRPELTPTAIKAGKLLAQRLFGK 352 (488)
T ss_dssp GBTTCCCCHHHHHHHHHHHHHHHHSC
T ss_pred ecCCCCcchhHHHHHHHHHHHHHcCC
Confidence 974 332 6889999999999864
No 74
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.97 E-value=7e-32 Score=266.32 Aligned_cols=288 Identities=17% Similarity=0.244 Sum_probs=198.1
Q ss_pred cCCeEEECCChHHHHHHHHHHHc--CCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQ--GVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFI 98 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~--g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (423)
++||+|||||++|+++|..|++. |.+|+|||+.+..+..... + +..... .. .....+.
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~-------~--~~~~~~--~~---------~~~~~l~ 95 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCG-------L--PYVISG--AI---------ASTEKLI 95 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGG-------H--HHHHTT--SS---------SCGGGGB
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCC-------c--chhhcC--Cc---------CCHHHhh
Confidence 57999999999999999999997 8999999998765421110 0 000000 00 0011111
Q ss_pred H-HHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCCCCCCcee
Q 014522 99 Q-YLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDIEGLADFGGEV 177 (423)
Q Consensus 99 ~-~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~~~~~~~~ 177 (423)
. +...+.+.++++++.+++|+.++... +.+.+.... ++ ...++.||+||+||| +.|..|.+||.+.. + +
T Consensus 96 ~~~~~~~~~~~gv~~~~~~~v~~i~~~~--~~v~v~~~~-~g---~~~~~~~d~lviAtG--~~p~~p~i~G~~~~-~-v 165 (480)
T 3cgb_A 96 ARNVKTFRDKYGIDAKVRHEVTKVDTEK--KIVYAEHTK-TK---DVFEFSYDRLLIATG--VRPVMPEWEGRDLQ-G-V 165 (480)
T ss_dssp SSCHHHHHHTTCCEEESSEEEEEEETTT--TEEEEEETT-TC---CEEEEECSEEEECCC--EEECCCCCBTTTSB-T-E
T ss_pred hcCHHHHHhhcCCEEEeCCEEEEEECCC--CEEEEEEcC-CC---ceEEEEcCEEEECCC--CcccCCCCCCccCC-C-E
Confidence 1 12233345689989999999987655 665444311 11 224799999999999 78888888887532 1 2
Q ss_pred eecCCCCCC--C-----CCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHhhccH
Q 014522 178 IHACDYKSG--E-----KYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPL 250 (423)
Q Consensus 178 ~~~~~~~~~--~-----~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (423)
++.....+. . ...+++++|||+|.+|+|+|..|++.|.+|+++.+.+ .+++...
T Consensus 166 ~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~------------------ 226 (480)
T 3cgb_A 166 HLLKTIPDAERILKTLETNKVEDVTIIGGGAIGLEMAETFVELGKKVRMIERND-HIGTIYD------------------ 226 (480)
T ss_dssp ECCSSHHHHHHHHHHHHSSCCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGG-GTTSSSC------------------
T ss_pred EEeCCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCC-chhhcCC------------------
Confidence 322221110 0 1157899999999999999999999999999999988 3433221
Q ss_pred HHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeCCe-E--EEccC
Q 014522 251 WLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISCGQ-A--ELING 325 (423)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~~-v--~~~~g 325 (423)
+.+...+.+.+++.+|+++.+ +.++..++ + ...++
T Consensus 227 ----------------------------------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~v~~v~~~~ 266 (480)
T 3cgb_A 227 ----------------------------------------GDMAEYIYKEADKHHIEILTNENVKAFKGNERVEAVETDK 266 (480)
T ss_dssp ----------------------------------------HHHHHHHHHHHHHTTCEEECSCCEEEEEESSBEEEEEETT
T ss_pred ----------------------------------------HHHHHHHHHHHHHcCcEEEcCCEEEEEEcCCcEEEEEECC
Confidence 111112344455678888876 67776443 2 23355
Q ss_pred cEecccEEEEcCCCCCCCCCccccccc-ccCCCCCCCCCCCCCCCCCceEEEeecccc-------------CCCcchhHH
Q 014522 326 EKLDIDAIVLATGYRSNVPSWLQESEF-FSENGFPKAPFPHGWKGNAGLYAVGFTRRG-------------LSGASSDAM 391 (423)
Q Consensus 326 ~~~~~D~vi~a~G~~~~~~~ll~~~~~-~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~-------------~~~a~~~g~ 391 (423)
.++++|.||+|+|++|++ .+++..++ .+++|++.+| ++++|+.|+|||+|||+.. ...|..||+
T Consensus 267 ~~i~~D~vi~a~G~~p~~-~~l~~~g~~~~~~G~I~Vd-~~~~ts~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~ 344 (480)
T 3cgb_A 267 GTYKADLVLVSVGVKPNT-DFLEGTNIRTNHKGAIEVN-AYMQTNVQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGR 344 (480)
T ss_dssp EEEECSEEEECSCEEESC-GGGTTSCCCBCTTSCBCCC-TTSBCSSTTEEECGGGBCEEBTTTCSEECCCCHHHHHHHHH
T ss_pred CEEEcCEEEECcCCCcCh-HHHHhCCcccCCCCCEEEC-CCccCCCCCEEEeeeEEEecCCCCCcceecchHHHHHHHHH
Confidence 689999999999999997 67888887 5668999999 5788999999999999842 126899999
Q ss_pred HHHHHHhh
Q 014522 392 RIAQDIGK 399 (423)
Q Consensus 392 ~~a~~i~~ 399 (423)
.+|.+|.+
T Consensus 345 ~aa~~i~g 352 (480)
T 3cgb_A 345 LAGLNMLD 352 (480)
T ss_dssp HHHHHHTT
T ss_pred HHHHHhcC
Confidence 99999986
No 75
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.97 E-value=2.7e-30 Score=254.41 Aligned_cols=324 Identities=22% Similarity=0.283 Sum_probs=198.8
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcC-----CCEEEEecCCCCCcccccccC-CceeecCC-----------CccccCCCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQG-----VPFVMLERAECIASLWQKRTY-DRLNLHLP-----------KQFCQLPKL 82 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g-----~~v~lie~~~~~gg~~~~~~~-~~~~~~~~-----------~~~~~~~~~ 82 (423)
.++||+|||||++|+++|..|++.| .+|+|||+.+.+| |....+ +...+..+ ...+.+..+
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g--~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~ 106 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYR--WHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNY 106 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCC--SSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCC--CcCCCCCCCCcCCcchhhccccccCCCCCCChhHh
Confidence 3569999999999999999999999 9999999998877 655433 22222111 000000000
Q ss_pred --------CCCCCCCCCCCHHHHHHHHHHHHHHcCCceeccceEEEEEEeCC-CCeE--EEEEcccCCCCCceEEEEeCE
Q 014522 83 --------QFPEDFPEYPTKRQFIQYLESYAEKFEINPRFNECVQSARYDET-SGLW--RVKTASSAGSTKTEFEYICRW 151 (423)
Q Consensus 83 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~-~~~~--~v~~~~~~~~~~~~~~~~~d~ 151 (423)
.++.....++.+.++.+|+.+.++++++.++++++|++++...+ .+.| .|++.+..+ ...++.||+
T Consensus 107 l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g---~~~~~~~d~ 183 (463)
T 3s5w_A 107 LHKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADG---EELVRTTRA 183 (463)
T ss_dssp HHHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTS---CEEEEEESE
T ss_pred hhhcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCC---ceEEEEeCE
Confidence 00011134567899999999999999999999999999988621 1444 566555221 224899999
Q ss_pred EEEccCCCCCCcCCCCCCCCCCCc--eeeecCCCCCC-CCC-----CCCEEEEECCCCCHHHHHHHHhcc--CCccEEEE
Q 014522 152 LVVATGENAERVMPDIEGLADFGG--EVIHACDYKSG-EKY-----KGKKVLVVGCGNSGMELSLDLSNH--NASPSMVV 221 (423)
Q Consensus 152 vviAtG~~~~~~~p~~~g~~~~~~--~~~~~~~~~~~-~~~-----~~~~v~ViG~G~~~~e~a~~l~~~--g~~V~~v~ 221 (423)
||+||| +.|.+|.. +..+.+ .++++.++... ... .+++|+|||+|.+|+|+|..|++. +.+|+++.
T Consensus 184 lVlAtG--~~p~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~ 259 (463)
T 3s5w_A 184 LVVSPG--GTPRIPQV--FRALKGDGRVFHHSQYLEHMAKQPCSSGKPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMIL 259 (463)
T ss_dssp EEECCC--CEECCCGG--GGGGTTCTTEEEGGGHHHHHCC-------CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEEC
T ss_pred EEECCC--CCCCCcch--hhhcCCCCcEEECHHHHhhHHHhhhcccCCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEE
Confidence 999999 67776652 222333 45666654331 112 578999999999999999999999 88999999
Q ss_pred ecCceeecccccCCChHHHHHHH--------HhhccHHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccc-
Q 014522 222 RSSVHVLPREILGKSTFELATLM--------MKWLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPV- 292 (423)
Q Consensus 222 r~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 292 (423)
|++ .++|.... .+...+ ...++.....++......... ...++.
T Consensus 260 r~~-~~~p~~~~-----~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~---------------------~~~~~~~ 312 (463)
T 3s5w_A 260 RAS-ALKPADDS-----PFVNEVFAPKFTDLIYSREHAERERLLREYHNTNY---------------------SVVDTDL 312 (463)
T ss_dssp SSS-SCCBCCCC-----HHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTS---------------------SCBCHHH
T ss_pred eCC-CCcCccCC-----ccchhccChhHHHHHhcCCHHHHHHHHHHhhccCC---------------------CcCCHHH
Confidence 999 46665443 221111 111222222222211110000 000111
Q ss_pred ----cChhhhhhhh-cCCeEEecC--ceEEeCC--e--EEEc---cCc--EecccEEEEcCCCCCC-CCCcccccccccC
Q 014522 293 ----LDIGALKKIR-SGHINVVPG--IKRISCG--Q--AELI---NGE--KLDIDAIVLATGYRSN-VPSWLQESEFFSE 355 (423)
Q Consensus 293 ----~~~~~~~~~~-~~~i~~~~~--i~~~~~~--~--v~~~---~g~--~~~~D~vi~a~G~~~~-~~~ll~~~~~~~~ 355 (423)
+...+.+.+. ..+|+++.+ ++++..+ + +.+. +|+ ++++|.||+|||++|+ ...+++.+....
T Consensus 313 ~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~~~~~~l~~l~~~~- 391 (463)
T 3s5w_A 313 IERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGYERQLHRQLLEPLAEYL- 391 (463)
T ss_dssp HHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCCEECCC-CTTTGGGGGGB-
T ss_pred HHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeCCCCCCccchhHHHHHHh-
Confidence 1111122222 258888887 6666543 2 5555 666 4999999999999999 236666653322
Q ss_pred CCCCCCCCCCCCCC----CCceEEEeeccc
Q 014522 356 NGFPKAPFPHGWKG----NAGLYAVGFTRR 381 (423)
Q Consensus 356 ~g~~~~~~~~~~~~----~~~vya~Gd~~~ 381 (423)
|.+.++..+.... .|+|||+|||..
T Consensus 392 -g~i~v~~~~~~~~~~~~~~~Ifa~G~~~~ 420 (463)
T 3s5w_A 392 -GDHEIGRDYRLQTDERCKVAIYAQGFSQA 420 (463)
T ss_dssp -C--CCCTTSBCCBCTTBCSEEEESSCCHH
T ss_pred -CCcccCcccccccCCCCCCeEEEcCCCcc
Confidence 6677764333222 567999999974
No 76
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.97 E-value=1.3e-32 Score=266.61 Aligned_cols=301 Identities=16% Similarity=0.139 Sum_probs=206.0
Q ss_pred cCCeEEECCChHHHHHHHHHHH---cCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRD---QGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQF 97 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~---~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (423)
|++|+|||||++|+++|..|++ .|.+|+|||+++..+.... .+. .........++
T Consensus 1 m~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~-----------------~~~-----~~~~~~~~~~~ 58 (409)
T 3h8l_A 1 MTKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPA-----------------LPH-----VAIGVRDVDEL 58 (409)
T ss_dssp -CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCS-----------------SCC-----CCSSCCCCCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccc-----------------hhh-----cccCCcCHHHH
Confidence 3689999999999999999999 8999999999874321100 000 00011112222
Q ss_pred HHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCCCCCCcee
Q 014522 98 IQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDIEGLADFGGEV 177 (423)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~~~~~~~~ 177 (423)
..++.+.+.+.+++++.+ +|+.++.+. .. |++.+..+ +..++.||+||+||| +.|..|.+||+++. .
T Consensus 59 ~~~~~~~~~~~gv~~~~~-~v~~i~~~~--~~--V~~~~g~~---~~~~~~~d~lViAtG--~~~~~~~ipG~~~~---~ 125 (409)
T 3h8l_A 59 KVDLSEALPEKGIQFQEG-TVEKIDAKS--SM--VYYTKPDG---SMAEEEYDYVIVGIG--AHLATELVKGWDKY---G 125 (409)
T ss_dssp EEEHHHHTGGGTCEEEEC-EEEEEETTT--TE--EEEECTTS---CEEEEECSEEEECCC--CEECGGGSBTHHHH---C
T ss_pred HHHHHHHHhhCCeEEEEe-eEEEEeCCC--CE--EEEccCCc---ccceeeCCEEEECCC--CCcCccCCCChhhc---C
Confidence 334555566678887766 888887654 44 66655221 335699999999999 67887888887641 2
Q ss_pred eecCCCCCCCCC------CCCEEEEECCCC-------------------------CHHHHHHH----HhccCC----ccE
Q 014522 178 IHACDYKSGEKY------KGKKVLVVGCGN-------------------------SGMELSLD----LSNHNA----SPS 218 (423)
Q Consensus 178 ~~~~~~~~~~~~------~~~~v~ViG~G~-------------------------~~~e~a~~----l~~~g~----~V~ 218 (423)
.+.+...+.... ..++++|||+|. .++|+|.. +.+.|. +|+
T Consensus 126 ~~~~~~~~~~~~~~~l~~~~~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~~g~~~~~~v~ 205 (409)
T 3h8l_A 126 YSVCEPEFATKLREKLESFQGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKGMLDKVHVT 205 (409)
T ss_dssp EESSSTTHHHHHHHHHHHCCSEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHTTTCTTTEEEE
T ss_pred cCcCCHHHHHHHHHHHHHhcCCeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHHHHHHHHHHcCCCCCeEEE
Confidence 233322211111 126778999992 36787754 456663 799
Q ss_pred EEEecCceeecccccCCChHHHHHHHHhhccHHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhh
Q 014522 219 MVVRSSVHVLPREILGKSTFELATLMMKWLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGAL 298 (423)
Q Consensus 219 ~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (423)
++.+.+ +++.... .+...+.
T Consensus 206 ~~~~~~--~l~~~~~----------------------------------------------------------~~~~~~~ 225 (409)
T 3h8l_A 206 VFSPGE--YLSDLSP----------------------------------------------------------NSRKAVA 225 (409)
T ss_dssp EECSSS--SSTTBCH----------------------------------------------------------HHHHHHH
T ss_pred EEeCCc--cccccCH----------------------------------------------------------HHHHHHH
Confidence 998877 3232211 1112234
Q ss_pred hhhhcCCeEEecC--ceEEeCCeEEEccCcEecccEEEEcCCCCCCCCCccccc--ccccCCCCCCCCCCCCCC-CCCce
Q 014522 299 KKIRSGHINVVPG--IKRISCGQAELINGEKLDIDAIVLATGYRSNVPSWLQES--EFFSENGFPKAPFPHGWK-GNAGL 373 (423)
Q Consensus 299 ~~~~~~~i~~~~~--i~~~~~~~v~~~~g~~~~~D~vi~a~G~~~~~~~ll~~~--~~~~~~g~~~~~~~~~~~-~~~~v 373 (423)
+.+++.+|+++++ |.+++.+++++++|+++++|.||+|+|+.|+ .++..+ ++.+++|++.+|. ++++ +.|+|
T Consensus 226 ~~l~~~gV~~~~~~~v~~i~~~~v~~~~g~~~~~D~vi~a~G~~~~--~~l~~~~~~l~~~~G~i~vd~-~~~~~~~~~v 302 (409)
T 3h8l_A 226 SIYNQLGIKLVHNFKIKEIREHEIVDEKGNTIPADITILLPPYTGN--PALKNSTPDLVDDGGFIPTDL-NMVSIKYDNV 302 (409)
T ss_dssp HHHHHHTCEEECSCCEEEECSSEEEETTSCEEECSEEEEECCEECC--HHHHTSCGGGSCTTSCBCBBT-TSBBSSCTTE
T ss_pred HHHHHCCCEEEcCCceEEECCCeEEECCCCEEeeeEEEECCCCCcc--HHHHhccccCcCCCCCEEeCc-ccccCCCCCE
Confidence 4456678999976 8999999999999999999999999999998 566666 5667789999994 6666 89999
Q ss_pred EEEeecccc--C---CCcchhHHHHHHHHhhhhHHHHHHHhhhhhhhhhhhhcc
Q 014522 374 YAVGFTRRG--L---SGASSDAMRIAQDIGKVWKEETKQQKKRTTACHRRCISQ 422 (423)
Q Consensus 374 ya~Gd~~~~--~---~~a~~~g~~~a~~i~~~l~~~~~~~~~~~~~~~~~~~~~ 422 (423)
|++|||+.. . ..|..||+.+|.+|.+.+...... ..+.+...|+++
T Consensus 303 fa~GD~~~~~~~~~~~~A~~q~~~aa~~i~~~l~~~~~~---~~~~~~~~c~~~ 353 (409)
T 3h8l_A 303 YAVGDANSMTVPKLGYLAVMTGRIAAQHLANRLGVPTKV---DKYYPTIVCVAD 353 (409)
T ss_dssp EECGGGBTTCCSCCHHHHHHHHHHHHHHHHHHTTCCCCC---CCCCCCCSCGGG
T ss_pred EEeehhccCCCCcHHHHHHHHHHHHHHHHHHHhcCCCCc---cccCCEEEEEEe
Confidence 999999862 2 268999999999999998433222 236666788764
No 77
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.97 E-value=1.3e-31 Score=262.36 Aligned_cols=287 Identities=16% Similarity=0.185 Sum_probs=197.0
Q ss_pred CCeEEECCChHHHHHHHHHHHc--CCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHH
Q 014522 22 NGPVIVGAGPSGLATAACLRDQ--GVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQ 99 (423)
Q Consensus 22 ~~vvIIGaG~aGl~~A~~L~~~--g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (423)
+||+|||||++|+++|..|++. |.+|+|||+.+..|.... .+ +..... .. .....+..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~-------~~--~~~~~~--~~---------~~~~~~~~ 60 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSA-------GM--QLYLEG--KV---------KDVNSVRY 60 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGG-------GH--HHHHTT--SS---------CCGGGSBS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccc-------cc--hhhhcC--cc---------CCHHHhhc
Confidence 3799999999999999999998 899999999876542100 00 000000 00 00011111
Q ss_pred HHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCCCCCCceeee
Q 014522 100 YLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDIEGLADFGGEVIH 179 (423)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~~~~~~~~~~ 179 (423)
+..+.+.+.+++++.++.|..++... +.+.+.... ++ ...++.||+||+||| +.|..|.+||.+. . .+++
T Consensus 61 ~~~~~~~~~gv~~~~~~~v~~i~~~~--~~v~~~~~~-~g---~~~~~~~d~lviAtG--~~p~~p~i~G~~~-~-~v~~ 130 (447)
T 1nhp_A 61 MTGEKMESRGVNVFSNTEITAIQPKE--HQVTVKDLV-SG---EERVENYDKLIISPG--AVPFELDIPGKDL-D-NIYL 130 (447)
T ss_dssp CCHHHHHHTTCEEEETEEEEEEETTT--TEEEEEETT-TC---CEEEEECSEEEECCC--EEECCCCSTTTTS-B-SEEC
T ss_pred CCHHHHHHCCCEEEECCEEEEEeCCC--CEEEEEecC-CC---ceEEEeCCEEEEcCC--CCcCCCCCCCCCC-C-CeEE
Confidence 12234455689988999999887655 564443311 11 224699999999999 7888888888753 1 2333
Q ss_pred cCCCCC-----C--CCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHhhccHHH
Q 014522 180 ACDYKS-----G--EKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPLWL 252 (423)
Q Consensus 180 ~~~~~~-----~--~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (423)
.....+ . ....+++++|||+|.+|+|+|..|++.|.+|+++.+.+ .+++...
T Consensus 131 ~~~~~~~~~l~~~~~~~~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~-------------------- 189 (447)
T 1nhp_A 131 MRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILD-RPLGVYL-------------------- 189 (447)
T ss_dssp CCHHHHHHHHHHHHTCTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-STTTTTC--------------------
T ss_pred ECCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCc-ccccccC--------------------
Confidence 222111 0 11157899999999999999999999999999999988 3333210
Q ss_pred HHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeCCe-E--EEccCcE
Q 014522 253 VDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISCGQ-A--ELINGEK 327 (423)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~~-v--~~~~g~~ 327 (423)
.+.+...+.+.+++.+|+++.+ +.++..++ + ...++.+
T Consensus 190 -------------------------------------~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~ 232 (447)
T 1nhp_A 190 -------------------------------------DKEFTDVLTEEMEANNITIATGETVERYEGDGRVQKVVTDKNA 232 (447)
T ss_dssp -------------------------------------CHHHHHHHHHHHHTTTEEEEESCCEEEEECSSBCCEEEESSCE
T ss_pred -------------------------------------CHHHHHHHHHHHHhCCCEEEcCCEEEEEEccCcEEEEEECCCE
Confidence 1111222345566778999876 77777542 2 2336678
Q ss_pred ecccEEEEcCCCCCCCCCccccccc-ccCCCCCCCCCCCCCCCCCceEEEeecccc-------------CCCcchhHHHH
Q 014522 328 LDIDAIVLATGYRSNVPSWLQESEF-FSENGFPKAPFPHGWKGNAGLYAVGFTRRG-------------LSGASSDAMRI 393 (423)
Q Consensus 328 ~~~D~vi~a~G~~~~~~~ll~~~~~-~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~-------------~~~a~~~g~~~ 393 (423)
+++|.||+|+|++|+. .+++.. + .+++|++.+| .+++|+.|+|||+|||+.. ...|..||+.+
T Consensus 233 i~~d~vi~a~G~~p~~-~~~~~~-~~~~~~G~i~Vd-~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~a 309 (447)
T 1nhp_A 233 YDADLVVVAVGVRPNT-AWLKGT-LELHPNGLIKTD-EYMRTSEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFA 309 (447)
T ss_dssp EECSEEEECSCEEESC-GGGTTT-SCBCTTSCBCCC-TTCBCSSTTEEECGGGSCEEEGGGTEEECCCCHHHHHHHHHHH
T ss_pred EECCEEEECcCCCCCh-HHHHhh-hhhcCCCcEEEC-ccccCCCCCEEEeeeEEEeeccCCCCceechhHHHHHHHHHHH
Confidence 9999999999999998 566666 5 4568989998 5788999999999999852 12689999999
Q ss_pred HHHHhh
Q 014522 394 AQDIGK 399 (423)
Q Consensus 394 a~~i~~ 399 (423)
|.+|.+
T Consensus 310 a~~i~g 315 (447)
T 1nhp_A 310 VKNLEE 315 (447)
T ss_dssp HHTSSS
T ss_pred HHhhcC
Confidence 999986
No 78
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.97 E-value=1.8e-30 Score=256.89 Aligned_cols=351 Identities=19% Similarity=0.188 Sum_probs=207.6
Q ss_pred ccccccCCeEEECCChHHHHHHHHHHHcC--------------CCEEEEecCCCCCccccccc-CCceeecCCCc--ccc
Q 014522 16 RRCIWVNGPVIVGAGPSGLATAACLRDQG--------------VPFVMLERAECIASLWQKRT-YDRLNLHLPKQ--FCQ 78 (423)
Q Consensus 16 ~~~~~~~~vvIIGaG~aGl~~A~~L~~~g--------------~~v~lie~~~~~gg~~~~~~-~~~~~~~~~~~--~~~ 78 (423)
++.+..+||||||+||+||++|..|.+.| ...+++|+.+.++ |..++ +++..++++.. ...
T Consensus 34 tp~~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~--Wh~g~~~p~~~~q~~fl~Dlvt 111 (501)
T 4b63_A 34 TPQDELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFA--WHSGMLVPGSKMQISFIKDLAT 111 (501)
T ss_dssp CCTTSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCC--SSGGGCCTTCBCSSCGGGSSST
T ss_pred CCCCCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCC--cCCCCCCCCccccccchhhhcc
Confidence 44456799999999999999999998753 3567788877665 66543 55555554321 111
Q ss_pred CC--C---------------CCCCCCCCCCCCHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCC------CeEEEEEc
Q 014522 79 LP--K---------------LQFPEDFPEYPTKRQFIQYLESYAEKFEINPRFNECVQSARYDETS------GLWRVKTA 135 (423)
Q Consensus 79 ~~--~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~------~~~~v~~~ 135 (423)
+. . ++|+.....|+++.++.+|+++.+++++..++++++|+++...... +.|.|++.
T Consensus 112 l~~P~s~~sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~ 191 (501)
T 4b63_A 112 LRDPRSSFTFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSR 191 (501)
T ss_dssp TTCTTCTTSHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEE
T ss_pred ccCCCCccchHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEe
Confidence 10 0 1122334568999999999999999998889999999999886543 35999987
Q ss_pred ccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCCCCCCceeeecCCCCC------CCCCCCCEEEEECCCCCHHHHHHH
Q 014522 136 SSAGSTKTEFEYICRWLVVATGENAERVMPDIEGLADFGGEVIHACDYKS------GEKYKGKKVLVVGCGNSGMELSLD 209 (423)
Q Consensus 136 ~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~------~~~~~~~~v~ViG~G~~~~e~a~~ 209 (423)
+..+ +...++.++.||+||| ..|.+|. ...+.+.++|+.++.. ...+.+|+|+|||+|.+|+|++..
T Consensus 192 ~~~~--g~~~~~~ar~vVlatG--~~P~iP~---~~~~~g~v~Hss~y~~~~~~~~~~~~~gKrV~VVG~G~SA~ei~~~ 264 (501)
T 4b63_A 192 NVET--GEISARRTRKVVIAIG--GTAKMPS---GLPQDPRIIHSSKYCTTLPALLKDKSKPYNIAVLGSGQSAAEIFHD 264 (501)
T ss_dssp ETTT--CCEEEEEEEEEEECCC--CEECCCT---TSCCCTTEEEGGGHHHHHHHHSCCTTSCCEEEEECCSHHHHHHHHH
T ss_pred cCCC--ceEEEEEeCEEEECcC--CCCCCCC---CCCCCcceeeccccccchhhccccccCCcEEEEECCcHHHHHHHHH
Confidence 6432 2446899999999999 6665554 4456678899988753 455789999999999999999999
Q ss_pred Hhcc--CCccEEEEecCceeecccccCCChHHHHHHHH---hhccHHHHHHHHHHHHHHHhcc------------ccccC
Q 014522 210 LSNH--NASPSMVVRSSVHVLPREILGKSTFELATLMM---KWLPLWLVDKILLILAWFILGN------------TESYG 272 (423)
Q Consensus 210 l~~~--g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~------------~~~~~ 272 (423)
|++. +.+|+++.|++. +.|.......+..+..... ..++.....++.........+. +.+..
T Consensus 265 L~~~~~~~~v~~~~R~~~-~~p~~~s~~~~~~f~p~~~~~f~~l~~~~r~~~~~~~~~~~~~~v~~~li~~i~~~~y~~~ 343 (501)
T 4b63_A 265 LQKRYPNSRTTLIMRDSA-MRPSDDSPFVNEIFNPERVDKFYSQSAAERQRSLLADKATNYSVVRLELIEEIYNDMYLQR 343 (501)
T ss_dssp HHHHSTTCEEEEECSSSS-CCBCCCCTTGGGGGSTTHHHHHHTSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHH
T ss_pred HHhcCCCceEEEEeCCCc-cccccccccchhhcCHHHHHHHHhCCHHHHHHHHHHHHhhhhcccCHHHHHHHHHHHHhhc
Confidence 9875 678999999994 4454443222111110001 1122222222211111100000 00000
Q ss_pred CCCCCCCcccccccCCCccc-cChhhhhhhhcCCeEEecCceEEeCCeEEEccCcEecccEEEEcCCCCCCCCCcccc-c
Q 014522 273 LKRPSMGPLALKNTMGKTPV-LDIGALKKIRSGHINVVPGIKRISCGQAELINGEKLDIDAIVLATGYRSNVPSWLQE-S 350 (423)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~i~~~~~~~v~~~~g~~~~~D~vi~a~G~~~~~~~ll~~-~ 350 (423)
+..+...+.. ....|. .............+++...+.+++.+++.+.+|+++++|.||+||||+++.+.++.. +
T Consensus 344 ~~~~~~~~~~----~~l~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~v~~~dg~~~~~D~VI~ATGy~~~~p~~L~~~~ 419 (501)
T 4b63_A 344 VKNPDETQWQ----HRILPERKITRVEHHGPQSRMRIHLKSSKPESEGAANDVKETLEVDALMVATGYNRNAHERLLSKV 419 (501)
T ss_dssp HHCSCGGGCS----SEEECSEEEEEEECCSSSSCEEEEEEESCC--------CCCEEEESEEEECCCEECCTHHHHTGGG
T ss_pred cCCCcccccc----eeecCCcceeeeeecCCCCeEEEEeeeeEEeCCeeEeCCCeEEECCEEEECcCCCCCCcchhcchh
Confidence 0000000000 000000 000001111234455544456667778899999999999999999999997655333 3
Q ss_pred -cc-ccCCCCCCCCCCCCC-------CCCCceEEEeecc
Q 014522 351 -EF-FSENGFPKAPFPHGW-------KGNAGLYAVGFTR 380 (423)
Q Consensus 351 -~~-~~~~g~~~~~~~~~~-------~~~~~vya~Gd~~ 380 (423)
.+ .+.+|.+.++.++.- ...++||+.|.+.
T Consensus 420 ~~l~~d~~g~~~v~rdy~~~~~~~~~~~~~~i~~qg~~~ 458 (501)
T 4b63_A 420 QHLRPTGQDQWKPHRDYRVEMDPSKVSSEAGIWLQGCNE 458 (501)
T ss_dssp GGGSSTTCCSCCBCTTSBBCCCTTTBCTTCEEEECSCCH
T ss_pred hhcCcCcCCCeeeCCCcEEeecCCccCCCceEEecCCCc
Confidence 23 355676665532221 2357799999653
No 79
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.97 E-value=5.6e-32 Score=264.08 Aligned_cols=306 Identities=14% Similarity=0.165 Sum_probs=210.2
Q ss_pred cCCeEEECCChHHHHHHHHHHH---cCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRD---QGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQF 97 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~---~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (423)
++||+|||||++|+++|..|++ .|.+|+|||+.+... |..... ..........++
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~-------~~~~~~---------------~~~~g~~~~~~~ 61 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQ-------FVPSNP---------------WVGVGWKERDDI 61 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEE-------CGGGHH---------------HHHHTSSCHHHH
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCc-------ccCCcc---------------ccccCccCHHHH
Confidence 5799999999999999999999 789999999986321 000000 000112345555
Q ss_pred HHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCCCCCCcee
Q 014522 98 IQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDIEGLADFGGEV 177 (423)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~~~~~~~~ 177 (423)
...+.+.+++.+++++ .++|+.++... .. |++.+ + .++.||+||+||| +.+..|.+||+....+..
T Consensus 62 ~~~l~~~~~~~gv~~~-~~~v~~id~~~--~~--V~~~~------g-~~i~~d~lviAtG--~~~~~~~ipG~~~~~~~~ 127 (437)
T 3sx6_A 62 AFPIRHYVERKGIHFI-AQSAEQIDAEA--QN--ITLAD------G-NTVHYDYLMIATG--PKLAFENVPGSDPHEGPV 127 (437)
T ss_dssp EEECHHHHHTTTCEEE-CSCEEEEETTT--TE--EEETT------S-CEEECSEEEECCC--CEECGGGSTTCSTTTSSE
T ss_pred HHHHHHHHHHCCCEEE-EeEEEEEEcCC--CE--EEECC------C-CEEECCEEEECCC--CCcCcccCCCCCcccCcc
Confidence 5566777777898875 56899887654 43 77765 4 5799999999999 788888889987643333
Q ss_pred eecCCCCCCCC--------CCCCEEEEECCCCC----H--HHHH----HHHhccCCc-----cEEEEecCceeecccccC
Q 014522 178 IHACDYKSGEK--------YKGKKVLVVGCGNS----G--MELS----LDLSNHNAS-----PSMVVRSSVHVLPREILG 234 (423)
Q Consensus 178 ~~~~~~~~~~~--------~~~~~v~ViG~G~~----~--~e~a----~~l~~~g~~-----V~~v~r~~~~~~~~~~~~ 234 (423)
...+...+... ..+++++|||+|.. | +|+| ..+.+.|.+ |+++.+.+ .+.+....+
T Consensus 128 ~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~-~~~~~~l~~ 206 (437)
T 3sx6_A 128 QSICTVDHAERAFAEYQALLREPGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEP-YIGHLGIQG 206 (437)
T ss_dssp ECCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSS-STTCTTTTC
T ss_pred eecccccHHHHHHHHHHHHHhCCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCc-cccccccCc
Confidence 33332211100 11456789998654 4 8887 555566654 99999987 331111100
Q ss_pred CChHHHHHHHHhhccHHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--c
Q 014522 235 KSTFELATLMMKWLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--I 312 (423)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i 312 (423)
.+.....+.+.+++.+|+++++ +
T Consensus 207 -------------------------------------------------------~~~~~~~~~~~l~~~gI~~~~~~~v 231 (437)
T 3sx6_A 207 -------------------------------------------------------VGDSKGILTKGLKEEGIEAYTNCKV 231 (437)
T ss_dssp -------------------------------------------------------CTTHHHHHHHHHHHTTCEEECSEEE
T ss_pred -------------------------------------------------------chHHHHHHHHHHHHCCCEEEcCCEE
Confidence 0011222445567789999987 8
Q ss_pred eEEeCCeEEEcc---------CcEecccEEEEcCCCCCCCCCcccccccccCCCCCCCCCCCCCC-CCCceEEEeecccc
Q 014522 313 KRISCGQAELIN---------GEKLDIDAIVLATGYRSNVPSWLQESEFFSENGFPKAPFPHGWK-GNAGLYAVGFTRRG 382 (423)
Q Consensus 313 ~~~~~~~v~~~~---------g~~~~~D~vi~a~G~~~~~~~ll~~~~~~~~~g~~~~~~~~~~~-~~~~vya~Gd~~~~ 382 (423)
.+++.+++.+++ ++++++|.+++++|+.++. .+.+..++.+++|++.+|. ++++ +.|+|||+|||+..
T Consensus 232 ~~v~~~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~~~-~~~~~~gl~~~~G~i~Vd~-~l~t~~~~~Ifa~GD~~~~ 309 (437)
T 3sx6_A 232 TKVEDNKMYVTQVDEKGETIKEMVLPVKFGMMIPAFKGVP-AVAGVEGLCNPGGFVLVDE-HQRSKKYANIFAAGIAIAI 309 (437)
T ss_dssp EEEETTEEEEEEECTTSCEEEEEEEECSEEEEECCEECCH-HHHTSTTTBCTTSCBCBCT-TSBBSSCTTEEECGGGBCC
T ss_pred EEEECCeEEEEecccCCccccceEEEEeEEEEcCCCcCch-hhhccccccCCCCcEEeCh-hccCCCCCCEEEEEEEecc
Confidence 899988877765 6789999999999999874 3333456777899999995 6666 89999999999863
Q ss_pred C------------C---CcchhHHHHHHHHhhhhHHHHHHHhhhhhhhhhhhhcc
Q 014522 383 L------------S---GASSDAMRIAQDIGKVWKEETKQQKKRTTACHRRCISQ 422 (423)
Q Consensus 383 ~------------~---~a~~~g~~~a~~i~~~l~~~~~~~~~~~~~~~~~~~~~ 422 (423)
. . .|+.||+.+|+||...+.+.+..+. .......|++.
T Consensus 310 ~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~g~~~~~~--~~~~~~~~~~~ 362 (437)
T 3sx6_A 310 PPVETTPVPTGAPKTGYMIESMVSAAVHNIKADLEGRKGEQT--MGTWNAVAFAD 362 (437)
T ss_dssp CCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHTTTSCCCCC--CCSCCEEEEEE
T ss_pred CCcCCCcCCCCCCcHHHHHHHHHHHHHHHHHHHhcCCCCCCc--ccCcceEEEEE
Confidence 2 1 5899999999999999987654331 14455677754
No 80
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.96 E-value=1.8e-29 Score=255.94 Aligned_cols=303 Identities=15% Similarity=0.146 Sum_probs=189.2
Q ss_pred cccCCeEEECCChHHHHHHHHHHHcCCCEEEEecC-C-------CCCcccccc-cCCceeecCCC-------ccccCCCC
Q 014522 19 IWVNGPVIVGAGPSGLATAACLRDQGVPFVMLERA-E-------CIASLWQKR-TYDRLNLHLPK-------QFCQLPKL 82 (423)
Q Consensus 19 ~~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~-~-------~~gg~~~~~-~~~~~~~~~~~-------~~~~~~~~ 82 (423)
...+||+|||||+||+++|..|++.|++|+|||+. + ..||+|... ..+...+.... ....+ ..
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~-g~ 183 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHF-GW 183 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhC-Cc
Confidence 35789999999999999999999999999999973 2 256654321 11111000000 00000 01
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHH-----------HHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCE
Q 014522 83 QFPEDFPEYPTKRQFIQYLESYA-----------EKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRW 151 (423)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~ 151 (423)
.++.. ........+.+++.... ...++++..+ .+..++ . .. +.+...++ +...+.||+
T Consensus 184 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~-~~~~~~--~--~~--v~v~~~~g---~~~~~~~d~ 252 (598)
T 2x8g_A 184 SLDRS-KISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNA-KGRLIS--P--HE--VQITDKNQ---KVSTITGNK 252 (598)
T ss_dssp CCCGG-GCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECS-EEEEEE--T--TE--EEEECTTC---CEEEEEEEE
T ss_pred cccCC-cCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEE-EEEEcC--C--CE--EEEEeCCC---CeEEEEeCE
Confidence 11100 00123445555544332 2335554332 232222 2 33 33322111 225799999
Q ss_pred EEEccCCCCCCcCCCCCCCCCCCceeeecCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeeccc
Q 014522 152 LVVATGENAERVMPDIEGLADFGGEVIHACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPRE 231 (423)
Q Consensus 152 vviAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~ 231 (423)
||+||| +.|..|.+||...+ .++..+... ....+++++|||+|.+|+|+|..|++.|.+|+++.|+ .+++..
T Consensus 253 lviAtG--s~p~~p~i~G~~~~---~~~~~~~~~-~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~--~~l~~~ 324 (598)
T 2x8g_A 253 IILATG--ERPKYPEIPGAVEY---GITSDDLFS-LPYFPGKTLVIGASYVALECAGFLASLGGDVTVMVRS--ILLRGF 324 (598)
T ss_dssp EEECCC--EEECCCSSTTHHHH---CEEHHHHTT-CSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS--CSSTTS
T ss_pred EEEeCC--CCCCCCCCCCcccc---eEcHHHHhh-CccCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC--cCcCcC
Confidence 999999 78888888886532 122222221 2345678999999999999999999999999999987 333332
Q ss_pred ccCCChHHHHHHHHhhccHHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC
Q 014522 232 ILGKSTFELATLMMKWLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG 311 (423)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 311 (423)
+. ++. ..+.+.+++.+|+++.+
T Consensus 325 d~-----~~~-----------------------------------------------------~~~~~~l~~~gv~i~~~ 346 (598)
T 2x8g_A 325 DQ-----QMA-----------------------------------------------------EKVGDYMENHGVKFAKL 346 (598)
T ss_dssp CH-----HHH-----------------------------------------------------HHHHHHHHHTTCEEEET
T ss_pred CH-----HHH-----------------------------------------------------HHHHHHHHhCCCEEEEC
Confidence 21 111 11233345567887765
Q ss_pred --ceEEe--------C---CeEE----EccCcEec--ccEEEEcCCCCCCCCCc-cccccc-ccCCCCCCCCCCCCCCCC
Q 014522 312 --IKRIS--------C---GQAE----LINGEKLD--IDAIVLATGYRSNVPSW-LQESEF-FSENGFPKAPFPHGWKGN 370 (423)
Q Consensus 312 --i~~~~--------~---~~v~----~~~g~~~~--~D~vi~a~G~~~~~~~l-l~~~~~-~~~~g~~~~~~~~~~~~~ 370 (423)
+.++. . +++. +.+|++++ +|.||+|+|++|++..+ ++..++ .+++|++.+| ++++|+.
T Consensus 347 ~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd-~~~~ts~ 425 (598)
T 2x8g_A 347 CVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKVLCETVGVKLDKNGRVVCT-DDEQTTV 425 (598)
T ss_dssp EEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEECGGGTBCGGGCCCBCTTSCBCCC-TTSBCSS
T ss_pred CeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCccccCccCchhcCceECCCCcEEeC-CCCcCCC
Confidence 44442 1 2232 35777655 99999999999998333 566777 5678999999 5688999
Q ss_pred CceEEEeecccc-CC---CcchhHHHHHHHHhhh
Q 014522 371 AGLYAVGFTRRG-LS---GASSDAMRIAQDIGKV 400 (423)
Q Consensus 371 ~~vya~Gd~~~~-~~---~a~~~g~~~a~~i~~~ 400 (423)
|+|||+|||+.+ .. .|.+||+.+|.+|.+.
T Consensus 426 ~~VyA~GD~~~~~~~~~~~A~~~g~~aa~~i~~~ 459 (598)
T 2x8g_A 426 SNVYAIGDINAGKPQLTPVAIQAGRYLARRLFAG 459 (598)
T ss_dssp TTEEECGGGBTTSCCCHHHHHHHHHHHHHHHHHC
T ss_pred CCEEEEeeecCCCCccHHHHHHhHHHHHHHHhcC
Confidence 999999999543 22 6899999999999863
No 81
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=99.96 E-value=1.6e-30 Score=256.78 Aligned_cols=295 Identities=18% Similarity=0.177 Sum_probs=189.9
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHH
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQ 99 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (423)
..++|||||||+||+++|..|.+.+++|+|||+++.. .|..+...... +..+...+..
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~-------~~~PlL~~va~---------------G~l~~~~i~~ 98 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYF-------LFTPLLPSAPV---------------GTVDEKSIIE 98 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEE-------ECGGGGGGTTT---------------TSSCGGGGEE
T ss_pred CCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCc-------ccccchhHHhh---------------ccccHHHhhh
Confidence 3568999999999999999999999999999998632 11111110000 0011111111
Q ss_pred HHHHHHH--HcCCceeccceEEEEEEeCCCCeEEEEEccc----------CC-CCCceEEEEeCEEEEccCCCCCCcCCC
Q 014522 100 YLESYAE--KFEINPRFNECVQSARYDETSGLWRVKTASS----------AG-STKTEFEYICRWLVVATGENAERVMPD 166 (423)
Q Consensus 100 ~~~~~~~--~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~----------~~-~~~~~~~~~~d~vviAtG~~~~~~~p~ 166 (423)
-+..... +.+++ +...+|++++.+. +...+...+. .+ ...+..++.||+|||||| +.+..+.
T Consensus 99 p~~~~~~~~~~~v~-~~~~~v~~ID~~~--k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtG--s~~~~~~ 173 (502)
T 4g6h_A 99 PIVNFALKKKGNVT-YYEAEATSINPDR--NTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVG--AEPNTFG 173 (502)
T ss_dssp EHHHHHTTCSSCEE-EEEEEEEEEEGGG--TEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCC--CEECCTT
T ss_pred hHHHHHHhhcCCeE-EEEEEEEEEEhhh--CEEEEeecccceeecccccccccccCCceEEeCCEEEEcCC--cccccCC
Confidence 1122221 12344 4456788888766 5532322100 00 001236899999999999 8888888
Q ss_pred CCCCCCCCceeeecCC--------------------CCCCCCCCCCEEEEECCCCCHHHHHHHHhccC------------
Q 014522 167 IEGLADFGGEVIHACD--------------------YKSGEKYKGKKVLVVGCGNSGMELSLDLSNHN------------ 214 (423)
Q Consensus 167 ~~g~~~~~~~~~~~~~--------------------~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g------------ 214 (423)
+||+.++.-. +.+.+ ..........+++|||+|++|+|+|..|++.+
T Consensus 174 ipG~~e~a~~-l~t~~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~ 252 (502)
T 4g6h_A 174 IPGVTDYGHF-LKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALA 252 (502)
T ss_dssp CTTHHHHCEE-CSSHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHH
T ss_pred ccCcccccCC-CCCHHHHHHHHHHHHHHHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHHHHhhccccc
Confidence 9997642110 00000 00000112347999999999999999988643
Q ss_pred --CccEEEEecCceeecccccCCChHHHHHHHHhhccHHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccc
Q 014522 215 --ASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPV 292 (423)
Q Consensus 215 --~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (423)
.+|+++.+.+ .++|.... +
T Consensus 253 ~~~~V~lve~~~-~il~~~~~-----~----------------------------------------------------- 273 (502)
T 4g6h_A 253 EEVQIHLVEALP-IVLNMFEK-----K----------------------------------------------------- 273 (502)
T ss_dssp HHCEEEEECSSS-SSSTTSCH-----H-----------------------------------------------------
T ss_pred ccceeEEecccc-ccccCCCH-----H-----------------------------------------------------
Confidence 5699999998 56564432 1
Q ss_pred cChhhhhhhhcCCeEEecC--ceEEeCCeEEE----ccC----cEecccEEEEcCCCCCCC--CCccccccc-ccCCCCC
Q 014522 293 LDIGALKKIRSGHINVVPG--IKRISCGQAEL----ING----EKLDIDAIVLATGYRSNV--PSWLQESEF-FSENGFP 359 (423)
Q Consensus 293 ~~~~~~~~~~~~~i~~~~~--i~~~~~~~v~~----~~g----~~~~~D~vi~a~G~~~~~--~~ll~~~~~-~~~~g~~ 359 (423)
......+.+++.+|+++++ +.+++++++.+ .|| +++++|+||+|+|.+|++ ..+....+. .+++|.+
T Consensus 274 ~~~~~~~~L~~~GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~~~~~~l~~~~~~~~~~~g~I 353 (502)
T 4g6h_A 274 LSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDLFKKIPEQNSSKRGL 353 (502)
T ss_dssp HHHHHHHHHHHTTCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEECCHHHHHHHHHSGGGTTCCSSE
T ss_pred HHHHHHHHHHhcceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCcCCHHHHhHHHhccccccCCCce
Confidence 1222345566789999988 88998887654 355 369999999999999983 123334454 4567888
Q ss_pred CCCCCCCCC-CCCceEEEeeccccC-----CCcchhHHHHHHHHhhhhH
Q 014522 360 KAPFPHGWK-GNAGLYAVGFTRRGL-----SGASSDAMRIAQDIGKVWK 402 (423)
Q Consensus 360 ~~~~~~~~~-~~~~vya~Gd~~~~~-----~~a~~~g~~~a~~i~~~l~ 402 (423)
.+|+ ++++ +.|+|||+|||+... ..|.+||.++|+||.+...
T Consensus 354 ~Vd~-~lq~~~~~~IfAiGD~a~~~~p~~a~~A~qqg~~~A~ni~~~~~ 401 (502)
T 4g6h_A 354 AVND-FLQVKGSNNIFAIGDNAFAGLPPTAQVAHQEAEYLAKNFDKMAQ 401 (502)
T ss_dssp EBCT-TSBBTTCSSEEECGGGEESSSCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred eECC-ccccCCCCCEEEEEcccCCCCCCchHHHHHHHHHHHHHHHHHhc
Confidence 8884 5655 899999999998532 2689999999999987654
No 82
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.96 E-value=1.8e-29 Score=246.49 Aligned_cols=294 Identities=21% Similarity=0.203 Sum_probs=191.6
Q ss_pred cCCeEEECCChHHHHHHHHHHH-c------CCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRD-Q------GVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPT 93 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~-~------g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (423)
.+||+|||||++|+++|..|++ . |.+|+|||+.+.+||.|+.... +.++.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv~-----------------------p~~~~ 59 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVA-----------------------PDHPK 59 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSC-----------------------TTCTG
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccccccC-----------------------CCCCC
Confidence 4689999999999999999999 7 9999999999888888754211 22234
Q ss_pred HHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCC-CcCCCCCCCCC
Q 014522 94 KRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAE-RVMPDIEGLAD 172 (423)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~-~~~p~~~g~~~ 172 (423)
..++..++.+.+.+.+++++.+..+ . .. |++.+ + .+.||+||+||| +. +..+.+||.+
T Consensus 60 ~~~~~~~~~~~~~~~~v~~~~~v~v------~--~~--v~~~~------~--~~~~d~lViAtG--~~~~~~~~ipG~~- 118 (456)
T 1lqt_A 60 IKSISKQFEKTAEDPRFRFFGNVVV------G--EH--VQPGE------L--SERYDAVIYAVG--AQSDRMLNIPGED- 118 (456)
T ss_dssp GGGGHHHHHHHHTSTTEEEEESCCB------T--TT--BCHHH------H--HHHSSEEEECCC--CCEECCCCCTTTT-
T ss_pred HHHHHHHHHHHHhcCCCEEEeeEEE------C--CE--EEECC------C--eEeCCEEEEeeC--CCCCCCCCCCCCC-
Confidence 4566777777777778877766543 1 22 44443 3 478999999999 54 5667788875
Q ss_pred CCceeeecCCC-----------CCCCCCCCCEEEEECCCCCHHHHHHHHhcc--------------------C-CccEEE
Q 014522 173 FGGEVIHACDY-----------KSGEKYKGKKVLVVGCGNSGMELSLDLSNH--------------------N-ASPSMV 220 (423)
Q Consensus 173 ~~~~~~~~~~~-----------~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~--------------------g-~~V~~v 220 (423)
..+ +++..++ .......+++++|||+|++|+|+|..|++. + .+|+++
T Consensus 119 ~~g-v~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv 197 (456)
T 1lqt_A 119 LPG-SIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIV 197 (456)
T ss_dssp STT-EEEHHHHHHHHTTCGGGTTCCCCCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEE
T ss_pred CCC-cEEHHHHHhhhhcCcccccchhhcCCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEE
Confidence 323 2222111 111223578999999999999999999974 4 489999
Q ss_pred EecCceeeccccc-------CCCh-------HHHH---HHHHhhccHHHHHHHHHHHHHHHhccccccCCCCCCCCcccc
Q 014522 221 VRSSVHVLPREIL-------GKST-------FELA---TLMMKWLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLAL 283 (423)
Q Consensus 221 ~r~~~~~~~~~~~-------~~~~-------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (423)
.|++ .+.+.+.. +.+. .++. ......++ ....++...
T Consensus 198 ~r~~-~~~~~f~~~elrel~~lp~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~------------------------ 251 (456)
T 1lqt_A 198 GRRG-PLQAAFTTLELRELADLDGVDVVIDPAELDGITDEDAAAVG-KVCKQNIKV------------------------ 251 (456)
T ss_dssp CSSC-GGGCCCCHHHHHHGGGCTTEEEECCGGGGTTCCHHHHHHHC-HHHHHHHHH------------------------
T ss_pred ecCC-hhhhccChHHHHHhhcCCCceeeeChHHhccchhhhhhhcc-HHHHHHHHH------------------------
Confidence 9988 33222110 0000 0000 00000000 001111111
Q ss_pred cccCCCccccChhhhhhhhc------CCeEEecC--ceEEeCC----eEEEc----------------cC--cEecccEE
Q 014522 284 KNTMGKTPVLDIGALKKIRS------GHINVVPG--IKRISCG----QAELI----------------NG--EKLDIDAI 333 (423)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~------~~i~~~~~--i~~~~~~----~v~~~----------------~g--~~~~~D~v 333 (423)
+.+.+.+ .+|+++.+ +.++..+ ++.+. +| +++++|.|
T Consensus 252 -------------l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~v 318 (456)
T 1lqt_A 252 -------------LRGYADREPRPGHRRMVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLV 318 (456)
T ss_dssp -------------HHHHHTCC-CTTSEEEEEECSEEEEEEECSSSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEE
T ss_pred -------------HHHHhhcCCCCCCceEEEEeCCCCeEEecCCcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEE
Confidence 1111222 57777766 5666543 25443 34 46999999
Q ss_pred EEcCCCCCCCCCccccccc-ccCCCCCCCCCCCCC-CCCCceEEEeeccccCC----CcchhHHHHHHHHhhhhHHH
Q 014522 334 VLATGYRSNVPSWLQESEF-FSENGFPKAPFPHGW-KGNAGLYAVGFTRRGLS----GASSDAMRIAQDIGKVWKEE 404 (423)
Q Consensus 334 i~a~G~~~~~~~ll~~~~~-~~~~g~~~~~~~~~~-~~~~~vya~Gd~~~~~~----~a~~~g~~~a~~i~~~l~~~ 404 (423)
|+|+|++|++ + .++ ++++|.+++|. .++ ++.|+|||+|||++++. .|+.+|..+|.+|..++...
T Consensus 319 i~a~G~~p~~--l---~gl~~d~~g~i~vn~-~~rvt~~pgvya~GD~~~gp~~~i~~a~~~g~~~a~~i~~~l~~~ 389 (456)
T 1lqt_A 319 VRSVGYRGVP--T---PGLPFDDQSGTIPNV-GGRINGSPNEYVVGWIKRGPTGVIGTNKKDAQDTVDTLIKNLGNA 389 (456)
T ss_dssp EECSCEECCC--C---TTSCCBTTTTBCCEE-TTEETTCSSEEECTHHHHCSCSCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred EEccccccCC--C---CCCcccCCCCeeECC-CCcCCCCCCEEEEeccCCCCchhHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999996 2 344 46678888773 455 78999999999986433 58899999999999998764
No 83
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.96 E-value=7.6e-29 Score=264.03 Aligned_cols=279 Identities=15% Similarity=0.210 Sum_probs=190.4
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCC-CEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHH
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGV-PFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFI 98 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~-~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (423)
..+||+|||||+||+++|..|+++|+ +|+|||+.+.+||.+.. .++. +.....+.
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~~---------------~ip~---------~~~~~~~~ 241 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTS---------------EIPQ---------FRLPYDVV 241 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHHH---------------TSCT---------TTSCHHHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccccc---------------cCCc---------ccCCHHHH
Confidence 46799999999999999999999999 79999999888887532 1111 11223456
Q ss_pred HHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCC-CCCCCCCcee
Q 014522 99 QYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDI-EGLADFGGEV 177 (423)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~-~g~~~~~~~~ 177 (423)
++..+.+++.+++++.++.+.. .. +++.+ + ..+.||+||+|||+ ..|..+.+ +|+....+ +
T Consensus 242 ~~~~~~~~~~gv~~~~~~~v~~-------~~--v~~~~------~-~~~~~d~vvlAtGa-~~p~~l~~~~G~~~~~g-v 303 (1025)
T 1gte_A 242 NFEIELMKDLGVKIICGKSLSE-------NE--ITLNT------L-KEEGYKAAFIGIGL-PEPKTDDIFQGLTQDQG-F 303 (1025)
T ss_dssp HHHHHHHHTTTCEEEESCCBST-------TS--BCHHH------H-HHTTCCEEEECCCC-CEECCCGGGTTCCTTTT-E
T ss_pred HHHHHHHHHCCcEEEcccEecc-------ce--EEhhh------c-CccCCCEEEEecCC-CCCCCCCCCCCCCCCCC-E
Confidence 6667777888999888887621 12 33333 2 35789999999994 14554443 45443222 2
Q ss_pred eecCCC--------------CC-CCCCCCCEEEEECCCCCHHHHHHHHhccCC-ccEEEEecCceeecccccCCChHHHH
Q 014522 178 IHACDY--------------KS-GEKYKGKKVLVVGCGNSGMELSLDLSNHNA-SPSMVVRSSVHVLPREILGKSTFELA 241 (423)
Q Consensus 178 ~~~~~~--------------~~-~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~-~V~~v~r~~~~~~~~~~~~~~~~~~~ 241 (423)
++..++ .. .....+++|+|||+|.+|+|+|..+++.|. +|++++|++...+|.... +
T Consensus 304 ~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~~~~~~~~-----e-- 376 (1025)
T 1gte_A 304 YTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVNIRAVPE-----E-- 376 (1025)
T ss_dssp EEHHHHHHHHHHHHCBTTBSCCCCCCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGGGCCSCHH-----H--
T ss_pred EEhHHHHHHHHhhcccccccccccccccCCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecChhhCCCCHH-----H--
Confidence 221111 11 112346799999999999999999999996 899999987433332221 0
Q ss_pred HHHHhhccHHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeC--
Q 014522 242 TLMMKWLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISC-- 317 (423)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~-- 317 (423)
.+.+++.+|+++.+ +.++..
T Consensus 377 --------------------------------------------------------~~~~~~~Gv~~~~~~~~~~i~~~~ 400 (1025)
T 1gte_A 377 --------------------------------------------------------VELAKEEKCEFLPFLSPRKVIVKG 400 (1025)
T ss_dssp --------------------------------------------------------HHHHHHTTCEEECSEEEEEEEEET
T ss_pred --------------------------------------------------------HHHHHHcCCEEEeCCCceEEEccC
Confidence 11122344555443 333321
Q ss_pred Ce---EEEc-------------cC--cEecccEEEEcCCCCCCCCCccccc-cc-ccCCCCCCCCCCCCCCCCCceEEEe
Q 014522 318 GQ---AELI-------------NG--EKLDIDAIVLATGYRSNVPSWLQES-EF-FSENGFPKAPFPHGWKGNAGLYAVG 377 (423)
Q Consensus 318 ~~---v~~~-------------~g--~~~~~D~vi~a~G~~~~~~~ll~~~-~~-~~~~g~~~~~~~~~~~~~~~vya~G 377 (423)
+. +++. +| .++++|.||+|+|++|+...|+.+. ++ .+++|++.+|..+++|+.|+|||+|
T Consensus 401 g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~l~~~~~gl~~~~~G~I~vd~~~~~Ts~~~VfA~G 480 (1025)
T 1gte_A 401 GRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEALSPIKFNRWDLPEVDPETMQTSEPWVFAGG 480 (1025)
T ss_dssp TEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHTTTSCBCTTSSBCCCTTTCBCSSTTEEECS
T ss_pred CeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCCCchhhhhcccCceECCCCCEEECCCCCccCCCCEEEeC
Confidence 11 2221 12 3789999999999988654676653 67 5668999998557889999999999
Q ss_pred eccccCC---CcchhHHHHHHHHhhhhHH
Q 014522 378 FTRRGLS---GASSDAMRIAQDIGKVWKE 403 (423)
Q Consensus 378 d~~~~~~---~a~~~g~~~a~~i~~~l~~ 403 (423)
|++++.. .|+.||+.+|.+|.+.|..
T Consensus 481 D~~~~~~~~~~A~~~G~~aA~~i~~~L~~ 509 (1025)
T 1gte_A 481 DIVGMANTTVESVNDGKQASWYIHKYIQA 509 (1025)
T ss_dssp GGGCSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 9998544 6999999999999988864
No 84
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.95 E-value=7.3e-29 Score=242.43 Aligned_cols=304 Identities=19% Similarity=0.154 Sum_probs=190.3
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcC--CCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHH
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQG--VPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQF 97 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g--~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (423)
..+||+|||||++|+++|..|++.| .+|+|||+.+.+||.|+.... +.++....+
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~~-----------------------p~~~~~~~~ 61 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVA-----------------------PDHPEVKNV 61 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTSC-----------------------TTCGGGGGH
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeecccC-----------------------CCCccHHHH
Confidence 4679999999999999999999998 999999999888888754311 112233456
Q ss_pred HHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCC-cCCCCCCCCCCCce
Q 014522 98 IQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAER-VMPDIEGLADFGGE 176 (423)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~-~~p~~~g~~~~~~~ 176 (423)
..++.+.+++.+++++.++.|. .. |++.+ ..+.||+||+||| +.+ ..|.+||.+. .+
T Consensus 62 ~~~~~~~~~~~gv~~~~~~~v~--------~~--V~~~~--------~~~~~d~lVlAtG--s~~~~~~~ipG~~~-~g- 119 (460)
T 1cjc_A 62 INTFTQTARSDRCAFYGNVEVG--------RD--VTVQE--------LQDAYHAVVLSYG--AEDHQALDIPGEEL-PG- 119 (460)
T ss_dssp HHHHHHHHTSTTEEEEBSCCBT--------TT--BCHHH--------HHHHSSEEEECCC--CCEECCCCCTTTTS-TT-
T ss_pred HHHHHHHHHhCCcEEEeeeEEe--------eE--EEecc--------ceEEcCEEEEecC--cCCCCCCCCCCCCC-Cc-
Confidence 6777778888888888877661 12 44333 2468999999999 554 6678888752 22
Q ss_pred eeecCCC----------CCC-CCCCCCEEEEECCCCCHHHHHHHHh--------------------ccCC-ccEEEEecC
Q 014522 177 VIHACDY----------KSG-EKYKGKKVLVVGCGNSGMELSLDLS--------------------NHNA-SPSMVVRSS 224 (423)
Q Consensus 177 ~~~~~~~----------~~~-~~~~~~~v~ViG~G~~~~e~a~~l~--------------------~~g~-~V~~v~r~~ 224 (423)
+++..++ ... ....+++++|||+|++|+|+|..|+ +.+. +|+++.|++
T Consensus 120 v~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~ 199 (460)
T 1cjc_A 120 VFSARAFVGWYNGLPENRELAPDLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRG 199 (460)
T ss_dssp EEEHHHHHHHHTTCGGGTTCCCCTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSC
T ss_pred EEEHHHHHHHhhcCccccccccCCCCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCC
Confidence 2222111 111 1225789999999999999999999 4576 699999998
Q ss_pred ceeecccccCCChHHHHHH--------------------HHhhccHHHHHHHHHHHHHHHhccccccCCCCCCCCccccc
Q 014522 225 VHVLPREILGKSTFELATL--------------------MMKWLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLALK 284 (423)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (423)
....+... .++... ....++.. ..+....+..........++..
T Consensus 200 ~~~~~ft~-----~el~~l~~lp~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~---------- 263 (460)
T 1cjc_A 200 PLQVAFTI-----KELREMIQLPGTRPMLDPADFLGLQDRIKEAARP-RKRLMELLLRTATEKPGVEEAA---------- 263 (460)
T ss_dssp GGGCCCCH-----HHHHHHHTCTTEEEECCGGGGTTHHHHTTTSCHH-HHHHHHHHHHHHHSCCCHHHHH----------
T ss_pred hHhhccCH-----HHHHHhhcCCCceeEechhhhcchhhhhhhccHH-HHHHHHHHHHHHHhcccccccc----------
Confidence 32111000 011110 00001110 0111111100000000000000
Q ss_pred ccCCCccccChhhhhhhhcCCeEEecC--ceEEeCC-------eEEEc---------------cC--cEecccEEEEcCC
Q 014522 285 NTMGKTPVLDIGALKKIRSGHINVVPG--IKRISCG-------QAELI---------------NG--EKLDIDAIVLATG 338 (423)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~-------~v~~~---------------~g--~~~~~D~vi~a~G 338 (423)
.......+|+++.+ +.++..+ ++.+. +| +++++|+||+|+|
T Consensus 264 -------------~~~~~~~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G 330 (460)
T 1cjc_A 264 -------------RRASASRAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIG 330 (460)
T ss_dssp -------------HHHTCSEEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCC
T ss_pred -------------CCCCCCceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCC
Confidence 00011156777665 5555432 24432 34 5799999999999
Q ss_pred CCCCCCCccccccc--ccCCCCCCCCCCCCCCC-CCceEEEeeccccCC----CcchhHHHHHHHHhhhhHH
Q 014522 339 YRSNVPSWLQESEF--FSENGFPKAPFPHGWKG-NAGLYAVGFTRRGLS----GASSDAMRIAQDIGKVWKE 403 (423)
Q Consensus 339 ~~~~~~~ll~~~~~--~~~~g~~~~~~~~~~~~-~~~vya~Gd~~~~~~----~a~~~g~~~a~~i~~~l~~ 403 (423)
++|++ + .++ ++++|.+++| ..++++ .|+|||+|||++++. .|+.+|+.+|.+|...+..
T Consensus 331 ~~p~~--l---~gl~~~d~~g~i~vn-~~~rt~~~p~vya~Gd~~~g~~~~i~~a~~~g~~aa~~i~~~l~~ 396 (460)
T 1cjc_A 331 YKSRP--I---DPSVPFDPKLGVVPN-MEGRVVDVPGLYCSGWVKRGPTGVITTTMTDSFLTGQILLQDLKA 396 (460)
T ss_dssp EECCC--C---CTTSCCBTTTTBCCE-ETTEETTCTTEEECTHHHHCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCC--C---CCCcccccCCCeeEC-CCCcCcCCCCEEEEEeCCcCCCccHHHHHHHHHHHHHHHHHHHHh
Confidence 99995 2 344 4556778777 467777 799999999986433 6899999999999998865
No 85
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.95 E-value=1.9e-29 Score=259.20 Aligned_cols=272 Identities=17% Similarity=0.136 Sum_probs=199.2
Q ss_pred cccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHH
Q 014522 19 IWVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFI 98 (423)
Q Consensus 19 ~~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (423)
...+||+|||||++|+++|..|+++|++|+|||+.+..||.|.... ..+.+.....+.
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~~~----------------------~~p~~~~~~~~~ 446 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQES----------------------ALPGLSAWGRVK 446 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHHHH----------------------TSTTCGGGGHHH
T ss_pred cccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeeecc----------------------CCCchhHHHHHH
Confidence 3568999999999999999999999999999999998988764310 112223456677
Q ss_pred HHHHHHHHHc-CCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCC------CcCCCCCCCC
Q 014522 99 QYLESYAEKF-EINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAE------RVMPDIEGLA 171 (423)
Q Consensus 99 ~~~~~~~~~~-~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~------~~~p~~~g~~ 171 (423)
.++...+.++ +++++.++.|+ ..+ . ..+.||+||+|||.... +..|.+||.+
T Consensus 447 ~~~~~~~~~~~gv~~~~~~~v~--------------~~~------~-~~~~~d~lvlAtG~~~~~~~~~~~~~~~i~G~~ 505 (690)
T 3k30_A 447 EYREAVLAELPNVEIYRESPMT--------------GDD------I-VEFGFEHVITATGATWRTDGVARFHTTALPIAE 505 (690)
T ss_dssp HHHHHHHHTCTTEEEESSCCCC--------------HHH------H-HHTTCCEEEECCCEEECSSCCSSSCSSCCCBCT
T ss_pred HHHHHHHHHcCCCEEEECCeec--------------HHH------H-hhcCCCEEEEcCCCccccccccccCCCCCCCCC
Confidence 8888888876 77776665431 111 2 46789999999994322 5567778765
Q ss_pred CCCceeeecCCCCCCCCCCCCEEEEEC--CCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHhhcc
Q 014522 172 DFGGEVIHACDYKSGEKYKGKKVLVVG--CGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLP 249 (423)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~v~ViG--~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (423)
. ..+++..+........+++++||| +|.+|+|+|..|++.|.+|+++.+.+ .+++....
T Consensus 506 ~--~~v~~~~~~l~~~~~~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~-~l~~~~~~---------------- 566 (690)
T 3k30_A 506 G--MQVLGPDDLFAGRLPDGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGA-QVSSWTNN---------------- 566 (690)
T ss_dssp T--SEEECHHHHHTTCCCSSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSS-STTGGGGG----------------
T ss_pred C--CcEEcHHHHhCCCCCCCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccc-cccccccc----------------
Confidence 3 234555444444455678999999 99999999999999999999999988 33332210
Q ss_pred HHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeCCeEEEc----
Q 014522 250 LWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISCGQAELI---- 323 (423)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~~v~~~---- 323 (423)
+.....+.+.+++.+|+++++ +.+++.+++.+.
T Consensus 567 -----------------------------------------~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~~~~~ 605 (690)
T 3k30_A 567 -----------------------------------------TFEVNRIQRRLIENGVARVTDHAVVAVGAGGVTVRDTYA 605 (690)
T ss_dssp -----------------------------------------GTCHHHHHHHHHHTTCEEEESEEEEEEETTEEEEEETTT
T ss_pred -----------------------------------------chhHHHHHHHHHHCCCEEEcCcEEEEEECCeEEEEEccC
Confidence 011122455566789999987 888888876553
Q ss_pred -cCcEecccEEEEcCCCCCCCCCcccccccccCCCCCCCCCCCCCCCCCceEEEeeccccCC--CcchhHHHHHHHHhhh
Q 014522 324 -NGEKLDIDAIVLATGYRSNVPSWLQESEFFSENGFPKAPFPHGWKGNAGLYAVGFTRRGLS--GASSDAMRIAQDIGKV 400 (423)
Q Consensus 324 -~g~~~~~D~vi~a~G~~~~~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~--~a~~~g~~~a~~i~~~ 400 (423)
+++++++|.||+|+|++|+. .+++.++... . +|+.|+||++|||+.... .|+.||+.+|.+|.+.
T Consensus 606 ~~~~~i~aD~VV~A~G~~p~~-~l~~~l~~~~---~--------~t~~~~VyaiGD~~~~~~~~~A~~~g~~aa~~i~~~ 673 (690)
T 3k30_A 606 SIERELECDAVVMVTARLPRE-ELYLDLVARR---D--------AGEIASVRGIGDAWAPGTIAAAVWSGRRAAEEFDAV 673 (690)
T ss_dssp CCEEEEECSEEEEESCEEECC-HHHHHHHHHH---H--------HTSCSEEEECGGGTSCBCHHHHHHHHHHHHHHTTCC
T ss_pred CeEEEEECCEEEECCCCCCCh-HHHHHHhhhh---c--------ccCCCCEEEEeCCCchhhHHHHHHHHHHHHHHHHhh
Confidence 45589999999999999997 5555543211 1 678899999999997533 7999999999999998
Q ss_pred hHHHH
Q 014522 401 WKEET 405 (423)
Q Consensus 401 l~~~~ 405 (423)
+....
T Consensus 674 l~g~~ 678 (690)
T 3k30_A 674 LPSND 678 (690)
T ss_dssp CCCTT
T ss_pred ccCCC
Confidence 76543
No 86
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.95 E-value=2.1e-29 Score=249.02 Aligned_cols=300 Identities=15% Similarity=0.170 Sum_probs=189.5
Q ss_pred ccCCeEEECCChHHHHHHHHHHHc--CCCEEEEecCCCCCcccccccCCc-eeecC-CC--ccccCCCCCCCC------C
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQ--GVPFVMLERAECIASLWQKRTYDR-LNLHL-PK--QFCQLPKLQFPE------D 87 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~--g~~v~lie~~~~~gg~~~~~~~~~-~~~~~-~~--~~~~~~~~~~~~------~ 87 (423)
..+||+|||||+||+++|..|++. |.+|+|||+.+.++-.... ... +.... +. ....+..++... .
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~~--lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPP--LSKELWFSDDPNVTKTLRFKQWNGKERSIYFQP 87 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSGG--GGTGGGCC--CTHHHHCEEECTTSCEEESBSSC
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCC--CCHHhhcCCccchhhcccccccccccccccccc
Confidence 467899999999999999999988 7899999998765411000 000 00000 00 000000000000 0
Q ss_pred CCCCCCHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCC
Q 014522 88 FPEYPTKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDI 167 (423)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~ 167 (423)
...+.....+.+ ..+.+++++.+++|++++... .. |++.+ + .++.||+||+||| +.|..|.+
T Consensus 88 ~~~~~~~~~l~~-----~~~~gv~~~~g~~v~~id~~~--~~--V~~~~------g-~~i~yd~lviATG--s~p~~~~~ 149 (493)
T 1m6i_A 88 PSFYVSAQDLPH-----IENGGVAVLTGKKVVQLDVRD--NM--VKLND------G-SQITYEKCLIATG--GTPRSLSA 149 (493)
T ss_dssp GGGSBCTTTTTT-----STTCEEEEEETCCEEEEEGGG--TE--EEETT------S-CEEEEEEEEECCC--EEECCCHH
T ss_pred hHhhcchhhhhh-----hhcCCeEEEcCCEEEEEECCC--CE--EEECC------C-CEEECCEEEECCC--CCCCCCCC
Confidence 000011111100 123477888898999988654 43 77765 4 5799999999999 77776655
Q ss_pred CCCCC--CCceeeecCCCC-----CCCCCCCCEEEEECCCCCHHHHHHHHhc----cCCccEEEEecCceeecccccCCC
Q 014522 168 EGLAD--FGGEVIHACDYK-----SGEKYKGKKVLVVGCGNSGMELSLDLSN----HNASPSMVVRSSVHVLPREILGKS 236 (423)
Q Consensus 168 ~g~~~--~~~~~~~~~~~~-----~~~~~~~~~v~ViG~G~~~~e~a~~l~~----~g~~V~~v~r~~~~~~~~~~~~~~ 236 (423)
++... ....+....... ......+++++|||+|.+|+|+|..|++ .|.+|+++.+.+. ++++.
T Consensus 150 ~~~~~~~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~-~~~~~----- 223 (493)
T 1m6i_A 150 IDRAGAEVKSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKG-NMGKI----- 223 (493)
T ss_dssp HHTSCHHHHHTEEECCSHHHHHHHHHHHHHCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSS-TTTTT-----
T ss_pred cccccccccCceEEEcCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcc-ccccc-----
Confidence 44211 011111111110 0111247899999999999999999987 4678999988762 21111
Q ss_pred hHHHHHHHHhhccHHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceE
Q 014522 237 TFELATLMMKWLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKR 314 (423)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~ 314 (423)
++. .+...+.+.+++.+|+++.+ +.+
T Consensus 224 -----------l~~-----------------------------------------~~~~~~~~~l~~~GV~v~~~~~V~~ 251 (493)
T 1m6i_A 224 -----------LPE-----------------------------------------YLSNWTMEKVRREGVKVMPNAIVQS 251 (493)
T ss_dssp -----------SCH-----------------------------------------HHHHHHHHHHHTTTCEEECSCCEEE
T ss_pred -----------CCH-----------------------------------------HHHHHHHHHHHhcCCEEEeCCEEEE
Confidence 111 11112344566778999877 777
Q ss_pred EeC--C--eEEEccCcEecccEEEEcCCCCCCCCCccccccc-ccC-CCCCCCCCCCCCCCCCceEEEeeccccC-----
Q 014522 315 ISC--G--QAELINGEKLDIDAIVLATGYRSNVPSWLQESEF-FSE-NGFPKAPFPHGWKGNAGLYAVGFTRRGL----- 383 (423)
Q Consensus 315 ~~~--~--~v~~~~g~~~~~D~vi~a~G~~~~~~~ll~~~~~-~~~-~g~~~~~~~~~~~~~~~vya~Gd~~~~~----- 383 (423)
+.. + .+++.+|+++++|.||+|+|.+|++ .+++.+++ .++ +|.+.+| .++++ .|+|||+|||+...
T Consensus 252 i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn~-~l~~~~gl~~~~~~ggi~Vd-~~l~t-~~~IyA~GD~a~~~~~~~g 328 (493)
T 1m6i_A 252 VGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNV-ELAKTGGLEIDSDFGGFRVN-AELQA-RSNIWVAGDAACFYDIKLG 328 (493)
T ss_dssp EEEETTEEEEEETTSCEEEESEEEECCCEEECC-TTHHHHTCCBCTTTCSEECC-TTCEE-ETTEEECGGGEEEEETTTE
T ss_pred EEecCCeEEEEECCCCEEECCEEEECCCCCccH-HHHHHcCCccccCCCcEEEC-CCccc-CCCeeEeeeeEeccCcccC
Confidence 753 2 3677899999999999999999998 67877777 343 5777787 46667 59999999998521
Q ss_pred -------CCcchhHHHHHHHHhhh
Q 014522 384 -------SGASSDAMRIAQDIGKV 400 (423)
Q Consensus 384 -------~~a~~~g~~~a~~i~~~ 400 (423)
..|..||+.+|.+|.+.
T Consensus 329 ~~~~~~~~~A~~qg~~aa~ni~g~ 352 (493)
T 1m6i_A 329 RRRVEHHDHAVVSGRLAGENMTGA 352 (493)
T ss_dssp EECCCCHHHHHHHHHHHHHHHTSC
T ss_pred ccccchHHHHHHHHHHHHHHhcCC
Confidence 15899999999999864
No 87
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.95 E-value=1.9e-30 Score=252.81 Aligned_cols=301 Identities=15% Similarity=0.145 Sum_probs=194.9
Q ss_pred ccCCeEEECCChHHHHHHHHHHH--cCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHH
Q 014522 20 WVNGPVIVGAGPSGLATAACLRD--QGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQF 97 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~--~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (423)
|++||+|||||++|+++|..|++ .|.+|+|||+++..+...... ... .. .....++
T Consensus 1 M~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~-------~~~------~g---------~~~~~~~ 58 (430)
T 3h28_A 1 MAKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFP-------HLA------MG---------WRKFEDI 58 (430)
T ss_dssp -CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHH-------HHH------HT---------CSCGGGS
T ss_pred CCCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcc-------hhc------cC---------ccCHHHH
Confidence 35799999999999999999999 689999999987654211000 000 00 0001111
Q ss_pred HHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCCCCCCcee
Q 014522 98 IQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDIEGLADFGGEV 177 (423)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~~~~~~~~ 177 (423)
...+.+.+++.+++++. .+|+.++... .. |++.+ + .++.||+||+||| +.+..| |+.. .+..
T Consensus 59 ~~~~~~~~~~~gv~~~~-~~v~~id~~~--~~--v~~~~------g-~~i~~d~liiAtG--~~~~~p---g~~~-~g~~ 120 (430)
T 3h28_A 59 SVPLAPLLPKFNIEFIN-EKAESIDPDA--NT--VTTQS------G-KKIEYDYLVIATG--PKLVFG---AEGQ-EENS 120 (430)
T ss_dssp EEESTTTGGGGTEEEEC-SCEEEEETTT--TE--EEETT------C-CEEECSEEEECCC--CEEECC---SBTH-HHHS
T ss_pred HHHHHHHHHhcCCEEEE-EEEEEEECCC--CE--EEECC------C-cEEECCEEEEcCC--cccccC---CCCC-cCCc
Confidence 11122233445777665 5788887654 43 67665 4 5799999999999 666655 3321 1111
Q ss_pred eecCCCCCCC--------CCCCCEEEEECCCCCH------HHHHHHH----hccC----CccEEEEecCceeecccccCC
Q 014522 178 IHACDYKSGE--------KYKGKKVLVVGCGNSG------MELSLDL----SNHN----ASPSMVVRSSVHVLPREILGK 235 (423)
Q Consensus 178 ~~~~~~~~~~--------~~~~~~v~ViG~G~~~------~e~a~~l----~~~g----~~V~~v~r~~~~~~~~~~~~~ 235 (423)
.+.+...+.. ....++++|||+|.++ +|+|..+ .+.| .+|+++.+.+ .+.+....+
T Consensus 121 ~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~~~~~~V~~v~~~~-~~~~~~l~~- 198 (430)
T 3h28_A 121 TSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEP-YLGHFGVGG- 198 (430)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSS-STTCTTTTC-
T ss_pred cCcCCHHHHHHHHHHHHHHHhcCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCccceEEEEecCCc-cccccccCc-
Confidence 1111111100 0013467899987654 8887444 4556 4688888876 221110000
Q ss_pred ChHHHHHHHHhhccHHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ce
Q 014522 236 STFELATLMMKWLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IK 313 (423)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~ 313 (423)
.+.....+.+.+++.+|+++++ +.
T Consensus 199 ------------------------------------------------------~~~~~~~l~~~l~~~GV~i~~~~~v~ 224 (430)
T 3h28_A 199 ------------------------------------------------------IGASKRLVEDLFAERNIDWIANVAVK 224 (430)
T ss_dssp ------------------------------------------------------STTHHHHHHHHHHHTTCEEECSCEEE
T ss_pred ------------------------------------------------------chHHHHHHHHHHHHCCCEEEeCCEEE
Confidence 0112223455667789999987 89
Q ss_pred EEeCCeEEEcc----CcEecccEEEEcCCCCCCCCCcccc--cccccCCC-CCCCCCCCCCC-CCCceEEEeeccccC--
Q 014522 314 RISCGQAELIN----GEKLDIDAIVLATGYRSNVPSWLQE--SEFFSENG-FPKAPFPHGWK-GNAGLYAVGFTRRGL-- 383 (423)
Q Consensus 314 ~~~~~~v~~~~----g~~~~~D~vi~a~G~~~~~~~ll~~--~~~~~~~g-~~~~~~~~~~~-~~~~vya~Gd~~~~~-- 383 (423)
+++.+++++++ ++++++|.|++++|+.++ .++.. .++.+++| ++.+|. ++++ +.|+|||+|||+...
T Consensus 225 ~v~~~~v~~~~~~~~g~~i~~D~vv~a~G~~~~--~~l~~~~~gl~~~~G~~i~Vd~-~l~t~~~~~Ifa~GD~~~~~~~ 301 (430)
T 3h28_A 225 AIEPDKVIYEDLNGNTHEVPAKFTMFMPSFQGP--EVVASAGDKVANPANKMVIVNR-CFQNPTYKNIFGVGVVTAIPPI 301 (430)
T ss_dssp EECSSEEEEECTTSCEEEEECSEEEEECEEECC--HHHHTTCTTTBCTTTCCBCCCT-TSBCSSSTTEEECSTTBCCCCS
T ss_pred EEeCCeEEEEecCCCceEEeeeEEEECCCCccc--hhHhhccccCcCCCCCEEecCc-cccCCCCCCEEEEEeeeccCCc
Confidence 99988888887 789999999999999987 44444 46777789 999995 5665 999999999998632
Q ss_pred -------------CCcchhHHHHHHHHhhhhHHHHHHHhhhhhhhhhhhhcc
Q 014522 384 -------------SGASSDAMRIAQDIGKVWKEETKQQKKRTTACHRRCISQ 422 (423)
Q Consensus 384 -------------~~a~~~g~~~a~~i~~~l~~~~~~~~~~~~~~~~~~~~~ 422 (423)
..|+.||+.+|+||...+.+.+.... ......|++.
T Consensus 302 ~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~g~~~~~~---~~~~~~~~~~ 350 (430)
T 3h28_A 302 EKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNPDKYA---PRLSAICIAD 350 (430)
T ss_dssp SCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTCCCCEE---ECCCEEEEEE
T ss_pred cCCCCCCCCCchHHHHHHHHHHHHHHHHHHhcCCCCCCc---CCcceEEEEE
Confidence 15899999999999999987543322 5566777764
No 88
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.95 E-value=1.1e-28 Score=254.33 Aligned_cols=279 Identities=20% Similarity=0.245 Sum_probs=187.9
Q ss_pred cccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHH
Q 014522 19 IWVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFI 98 (423)
Q Consensus 19 ~~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (423)
...+||+|||||++|+++|..|+++|++|+|||+.+.+||.|..... + +.+.....+.
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~~~-------------~---------pg~~~~~~~~ 444 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQVAA-------------L---------PGLGEWSYHR 444 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHHTT-------------S---------TTCGGGHHHH
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeeccc-------------C---------CChHHHHHHH
Confidence 34689999999999999999999999999999999999987754210 0 1112223445
Q ss_pred HHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCC------CcCCCCCCCCC
Q 014522 99 QYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAE------RVMPDIEGLAD 172 (423)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~------~~~p~~~g~~~ 172 (423)
+|+....+.+. ..+..+..+. .. .. +++.+ + ..+.||+||+|||.... |..|.+||.++
T Consensus 445 ~~~~~~i~~~~---~~~~~~v~i~--~~-~~--v~~~~------~-~~~~~d~vviAtG~~~~~~~~~~p~~~~ipG~~~ 509 (729)
T 1o94_A 445 DYRETQITKLL---KKNKESQLAL--GQ-KP--MTADD------V-LQYGADKVIIATGARWNTDGTNCLTHDPIPGADA 509 (729)
T ss_dssp HHHHHHHHHHH---HHSTTCEEEC--SC-CC--CCHHH------H-HTSCCSEEEECCCEEECSSCCCTTTSSCCTTCCT
T ss_pred HHHHHHHHHhh---cccCCceEEE--eC-eE--Eehhh------c-cccCCCEEEEcCCCCcccccccCccCCCCCCccc
Confidence 55555444330 0011111121 10 11 33332 2 45889999999994321 56677888764
Q ss_pred CCceeeecCCCCCCCCCCCCEEEEEC--CCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHhhccH
Q 014522 173 FGGEVIHACDYKSGEKYKGKKVLVVG--CGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPL 250 (423)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~v~ViG--~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (423)
+...+++..+.+......+++|+||| +|.+|+|+|..|++.|.+|+++.+.+ +++.....
T Consensus 510 ~~~~v~~~~~~l~~~~~~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~--l~~~~~~~---------------- 571 (729)
T 1o94_A 510 SLPDQLTPEQVMDGKKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH--LANYMHFT---------------- 571 (729)
T ss_dssp TSTTEECHHHHHHCCSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC--TTHHHHHT----------------
T ss_pred cCCCEEEHHHHhcCCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc--cccccccc----------------
Confidence 33344444444333445678999999 99999999999999999999999987 32211100
Q ss_pred HHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeCCeEEEc----c
Q 014522 251 WLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISCGQAELI----N 324 (423)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~~v~~~----~ 324 (423)
.....+.+.+++.+|+++++ +.++..+++.+. +
T Consensus 572 -----------------------------------------~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~v~~~~~~~~ 610 (729)
T 1o94_A 572 -----------------------------------------LEYPNMMRRLHELHVEELGDHFCSRIEPGRMEIYNIWGD 610 (729)
T ss_dssp -----------------------------------------TCHHHHHHHHHHTTCEEECSEEEEEEETTEEEEEETTCS
T ss_pred -----------------------------------------ccHHHHHHHHHhCCCEEEcCcEEEEEECCeEEEEEecCC
Confidence 00011344456678999887 788887765542 3
Q ss_pred C-cE------------------ecccEEEEcCCCCCCCCCcccccccccCCCCCCCCCCCCCCCCCceEEEeeccccCC-
Q 014522 325 G-EK------------------LDIDAIVLATGYRSNVPSWLQESEFFSENGFPKAPFPHGWKGNAGLYAVGFTRRGLS- 384 (423)
Q Consensus 325 g-~~------------------~~~D~vi~a~G~~~~~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~- 384 (423)
+ ++ +++|.||+|+|++|++ .+++.++. .++ .+++|+.|+|||+|||+....
T Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~-~l~~~l~~-------~vd-~~~~t~~~~VyAiGD~~~~~~~ 681 (729)
T 1o94_A 611 GSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSEC-TLWNELKA-------RES-EWAENDIKGIYLIGDAEAPRLI 681 (729)
T ss_dssp CSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECC-HHHHHHHH-------TGG-GTGGGTCCEEEECGGGTSCCCH
T ss_pred ceEEecccccccccccCCcceeeeCCEEEECCCCCCCh-HHHHHHhh-------hcc-cccccCCCCeEEEeCccchhhH
Confidence 3 23 8999999999999997 56554422 133 467788999999999987433
Q ss_pred -CcchhHHHHHHHHhhhhH
Q 014522 385 -GASSDAMRIAQDIGKVWK 402 (423)
Q Consensus 385 -~a~~~g~~~a~~i~~~l~ 402 (423)
.|+.||+.+|.+|.+.+.
T Consensus 682 ~~A~~~G~~aA~~i~~~l~ 700 (729)
T 1o94_A 682 ADATFTGHRVAREIEEANP 700 (729)
T ss_dssp HHHHHHHHHHHHTTTSSCT
T ss_pred HHHHHHHHHHHHHhhhhcc
Confidence 699999999999988764
No 89
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.95 E-value=7.7e-28 Score=232.44 Aligned_cols=288 Identities=17% Similarity=0.153 Sum_probs=184.1
Q ss_pred CCeEEECCChHHHHHHHHHHHcC--CCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHH
Q 014522 22 NGPVIVGAGPSGLATAACLRDQG--VPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQ 99 (423)
Q Consensus 22 ~~vvIIGaG~aGl~~A~~L~~~g--~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (423)
++|||||||+||+++|..|++.+ .+|+|||+++..... ........ ... ..+.+..
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~-------p~~~~v~~------g~~---------~~~~~~~ 60 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTC-------YMSNEVIG------GDR---------ELASLRV 60 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECS-------TTHHHHHH------TSS---------CGGGGEE
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCc-------cCHHHHhc------CCC---------CHHHHhh
Confidence 57999999999999999999886 589999997642110 00000000 000 0000000
Q ss_pred HHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCCCCCCce-ee
Q 014522 100 YLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDIEGLADFGGE-VI 178 (423)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~~~~~~~-~~ 178 (423)
-+ +.+.+.+++++ ..+|+.++.+. .. +++.+ + .++.||+||+||| +.+..+.+||+.+.... ..
T Consensus 61 ~~-~~~~~~gv~~i-~~~v~~id~~~--~~--v~~~~------g-~~i~yd~LviAtG--~~~~~~~i~G~~e~~~~~~~ 125 (401)
T 3vrd_B 61 GY-DGLRAHGIQVV-HDSALGIDPDK--KL--VKTAG------G-AEFAYDRCVVAPG--IDLLYDKIEGYSEALAAKLP 125 (401)
T ss_dssp CS-HHHHHTTCEEE-CSCEEEEETTT--TE--EEETT------S-CEEECSEEEECCC--EEECGGGSBTCCSGGGGTSC
T ss_pred CH-HHHHHCCCEEE-EeEEEEEEccC--cE--EEecc------c-ceeecceeeeccC--CccccCCccCchhhcccCcc
Confidence 00 11223577754 45698888755 55 67765 4 6899999999999 88888888987764321 12
Q ss_pred ecCCCCCC--------CCCCCCEEEEECCCCC-----------HHHHHHHHhccC--CccEEEEecCceeecccccCCCh
Q 014522 179 HACDYKSG--------EKYKGKKVLVVGCGNS-----------GMELSLDLSNHN--ASPSMVVRSSVHVLPREILGKST 237 (423)
Q Consensus 179 ~~~~~~~~--------~~~~~~~v~ViG~G~~-----------~~e~a~~l~~~g--~~V~~v~r~~~~~~~~~~~~~~~ 237 (423)
+.....+. ........+|++.|.. +.+++..+.+.+ .+|+++.+.+. +.+..
T Consensus 126 ~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~i~~~~a~~e~~~~~a~~~~~~~~~~~v~i~~~~~~-~~~~~------ 198 (401)
T 3vrd_B 126 HAWKAGEQTALLRRQLESMDDGGVVIIAPPAPPFRCPPGPYERASQIAHYLKAHKSKSKVIILDNSQT-FSKQA------ 198 (401)
T ss_dssp CCSSCSHHHHHHHHHHHHSCTTCEEEEECCSSSCBCTTHHHHHHHHHHHHHHHHCTTCEEEEECSSSS-CTTHH------
T ss_pred ceeccHHHHHHHHHHHHhcccCCcEEEecCCccEEeehHHHHHHHHHHHHHHhcCCCCEEEEEccccc-ccccc------
Confidence 22221110 1112334444444332 345566666555 56888877762 21100
Q ss_pred HHHHHHHHhhccHHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEE
Q 014522 238 FELATLMMKWLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRI 315 (423)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~ 315 (423)
.+.. .....+...+++.+|+++.+ +..+
T Consensus 199 -~~~~-------------------------------------------------~~~~~~~~~l~~~gi~v~~~~~v~~v 228 (401)
T 3vrd_B 199 -QFTK-------------------------------------------------GWERLYGFGTENALIEWHPGPDAAVV 228 (401)
T ss_dssp -HHHH-------------------------------------------------HHHHHSCTTSTTCSEEEECTTTTCEE
T ss_pred -cccH-------------------------------------------------HHHHHHHHHHHhcCcEEEeCceEEEE
Confidence 0000 01111234456778998876 5555
Q ss_pred eC----CeEEEccCcEecccEEEEcCCCCCCCCCcccccccccCCCCCCCCCCCC-CCCCCceEEEeeccccC---C---
Q 014522 316 SC----GQAELINGEKLDIDAIVLATGYRSNVPSWLQESEFFSENGFPKAPFPHG-WKGNAGLYAVGFTRRGL---S--- 384 (423)
Q Consensus 316 ~~----~~v~~~~g~~~~~D~vi~a~G~~~~~~~ll~~~~~~~~~g~~~~~~~~~-~~~~~~vya~Gd~~~~~---~--- 384 (423)
.. ..+.+.+|+++++|++++++|.+|+ .+++..++.+++|++.+|.+++ .++.|||||+|||+... .
T Consensus 229 ~~~~~~~~v~~~~g~~i~~D~vi~~~g~~~~--~~~~~~gl~~~~G~i~VD~~tl~~t~~p~VfAiGDva~~~~~pk~a~ 306 (401)
T 3vrd_B 229 KTDTEAMTVETSFGETFKAAVINLIPPQRAG--KIAQSASLTNDSGWCPVDIRTFESSLQPGIHVIGDACNAAPMPKSAY 306 (401)
T ss_dssp EEETTTTEEEETTSCEEECSEEEECCCEEEC--HHHHHTTCCCTTSSBCBCTTTCBBSSSTTEEECGGGBCCTTSCBSHH
T ss_pred EecccceEEEcCCCcEEEeeEEEEecCcCCc--hhHhhccccccCCCEEECCCcceecCCCCEEEecccccCCCCCchHH
Confidence 42 2478899999999999999999987 6788888888899999996544 58999999999997532 1
Q ss_pred CcchhHHHHHHHHhhhhHHHH
Q 014522 385 GASSDAMRIAQDIGKVWKEET 405 (423)
Q Consensus 385 ~a~~~g~~~a~~i~~~l~~~~ 405 (423)
.|.+||+++|+||...+.+..
T Consensus 307 ~A~~qa~v~A~ni~~~l~G~~ 327 (401)
T 3vrd_B 307 SANSQAKVAAAAVVALLKGEE 327 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHhcCCC
Confidence 588999999999999998653
No 90
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.94 E-value=6.9e-27 Score=247.36 Aligned_cols=282 Identities=16% Similarity=0.164 Sum_probs=191.7
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHH
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQ 99 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (423)
..+||+|||||+||+++|..|++.|++|+|||+.+.+||.|.. . +...+ . . ....++..
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~-~-~k~~i---------~---------~-~~~~~~~~ 185 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLD-T-AGEQI---------D---------G-MDSSAWIE 185 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGG-S-SCCEE---------T---------T-EEHHHHHH
T ss_pred cCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceecc-C-Ccccc---------C---------C-CCHHHHHH
Confidence 3679999999999999999999999999999999999988762 1 10000 0 0 12334444
Q ss_pred HHHHHHHHc-CCceeccceEEEEEEeCCCCeEEEEEccc-CCC-------CCceEEEEeCEEEEccCCCCCCcCCCCCCC
Q 014522 100 YLESYAEKF-EINPRFNECVQSARYDETSGLWRVKTASS-AGS-------TKTEFEYICRWLVVATGENAERVMPDIEGL 170 (423)
Q Consensus 100 ~~~~~~~~~-~~~~~~~~~v~~v~~~~~~~~~~v~~~~~-~~~-------~~~~~~~~~d~vviAtG~~~~~~~p~~~g~ 170 (423)
.+.+.+.++ +++++.+++|.++.... ....+..... ... .++...+.||+||+||| +.|..|.+||.
T Consensus 186 ~~~~~l~~~~~v~~~~~~~V~~i~~~~--~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATG--s~p~~~~ipG~ 261 (965)
T 2gag_A 186 QVTSELAEAEETTHLQRTTVFGSYDAN--YLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATG--AHERPIVFENN 261 (965)
T ss_dssp HHHHHHHHSTTEEEESSEEEEEEETTT--EEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCC--EEECCCCCBTC
T ss_pred HHHHHHhhcCCcEEEeCCEEEeeecCC--ceeeeEeecccccccccccCCCCceEEEECCEEEECCC--CccCCCCCCCC
Confidence 444445554 88888888898876322 1111110000 000 00224799999999999 77888888886
Q ss_pred CCCCceeeecC---CCCC-CCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHh
Q 014522 171 ADFGGEVIHAC---DYKS-GEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMK 246 (423)
Q Consensus 171 ~~~~~~~~~~~---~~~~-~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~ 246 (423)
+.. + +++.. ++.. .....+++++|||+|.+|+|+|..|++.|.+|+++.+.+. +++.
T Consensus 262 ~~~-g-v~~~~~~~~~l~~~~~~~gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~-~~~~---------------- 322 (965)
T 2gag_A 262 DRP-G-IMLAGAVRSYLNRYGVRAGARIAVATTNDSAYELVRELAATGGVVAVIDARSS-ISAA---------------- 322 (965)
T ss_dssp CST-T-EEEHHHHHHHHHTTCEESCSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSS-CCHH----------------
T ss_pred CCC-C-EEEhHHHHHHHHhcCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCc-cchh----------------
Confidence 542 2 22221 1111 1223468999999999999999999999999999999883 2110
Q ss_pred hccHHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeC--C----
Q 014522 247 WLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISC--G---- 318 (423)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~--~---- 318 (423)
.+.+++.+|+++.+ +.++.. +
T Consensus 323 ---------------------------------------------------~~~l~~~GV~v~~~~~v~~i~~~~~~~v~ 351 (965)
T 2gag_A 323 ---------------------------------------------------AAQAVADGVQVISGSVVVDTEADENGELS 351 (965)
T ss_dssp ---------------------------------------------------HHHHHHTTCCEEETEEEEEEEECTTSCEE
T ss_pred ---------------------------------------------------HHHHHhCCeEEEeCCEeEEEeccCCCCEE
Confidence 12234567888877 677764 2
Q ss_pred eEEEcc-------C--cEecccEEEEcCCCCCCCCCcccccccccCCCCCCCCCCCC----CCCCCceEEEeeccccCC-
Q 014522 319 QAELIN-------G--EKLDIDAIVLATGYRSNVPSWLQESEFFSENGFPKAPFPHG----WKGNAGLYAVGFTRRGLS- 384 (423)
Q Consensus 319 ~v~~~~-------g--~~~~~D~vi~a~G~~~~~~~ll~~~~~~~~~g~~~~~~~~~----~~~~~~vya~Gd~~~~~~- 384 (423)
+|++.+ | +++++|.|++|+|++|++ .+++.. .|.+.+|.... .|+.|+|||+|||++...
T Consensus 352 ~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~-~l~~~~-----~g~i~vd~~~~~~v~~ts~p~IyAaGD~a~~~~l 425 (965)
T 2gag_A 352 AIVVAELDEARELGGTQRFEADVLAVAGGFNPVV-HLHSQR-----QGKLDWDTTIHAFVPADAVANQHLAGAMTGRLDT 425 (965)
T ss_dssp EEEEEEECTTCCEEEEEEEECSEEEEECCEEECC-HHHHHT-----TCCEEEETTTTEEEECSCCTTEEECGGGGTCCSH
T ss_pred EEEEEeccccCCCCceEEEEcCEEEECCCcCcCh-HHHHhC-----CCcEEEcCcccccccCCCCCCEEEEEecCCchhH
Confidence 466654 5 689999999999999997 554433 34454452222 278999999999997533
Q ss_pred -CcchhHHHHHHHHhhhhH
Q 014522 385 -GASSDAMRIAQDIGKVWK 402 (423)
Q Consensus 385 -~a~~~g~~~a~~i~~~l~ 402 (423)
.|..||+.+|.+|.+.+.
T Consensus 426 ~~A~~~G~~aA~~i~~~lg 444 (965)
T 2gag_A 426 ASALSTGAATGAAAATAAG 444 (965)
T ss_dssp HHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHcC
Confidence 788999999999998774
No 91
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.94 E-value=3.9e-27 Score=241.37 Aligned_cols=280 Identities=20% Similarity=0.286 Sum_probs=182.3
Q ss_pred cccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHH
Q 014522 19 IWVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFI 98 (423)
Q Consensus 19 ~~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (423)
...+||+|||||++|+++|..|++.|++|+|||+.+.+||.|.... .+ +.......+.
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~-------------~~---------~~~~~~~~~~ 428 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAK-------------QI---------PGKEEFYETL 428 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHT-------------TS---------TTCTTHHHHH
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccc-------------cC---------CCHHHHHHHH
Confidence 3468999999999999999999999999999999988888764310 00 1112334556
Q ss_pred HHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEE-EeCEEEEccCCCCCCcCCCCCCCCCCCcee
Q 014522 99 QYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEY-ICRWLVVATGENAERVMPDIEGLADFGGEV 177 (423)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~-~~d~vviAtG~~~~~~~p~~~g~~~~~~~~ 177 (423)
.++...+++++++++.++.|.. ..+ .||+||+||| +.|..|.+||.+.. .+
T Consensus 429 ~~~~~~~~~~gv~~~~~~~v~~------------------------~~~~~~d~lviAtG--~~p~~~~i~G~~~~--~v 480 (671)
T 1ps9_A 429 RYYRRMIEVTGVTLKLNHTVTA------------------------DQLQAFDETILASG--IVPRTPPIDGIDHP--KV 480 (671)
T ss_dssp HHHHHHHHHHTCEEEESCCCCS------------------------SSSCCSSEEEECCC--EEECCCCCBTTTST--TE
T ss_pred HHHHHHHHHcCCEEEeCcEecH------------------------HHhhcCCEEEEccC--CCcCCCCCCCCCCC--cE
Confidence 6777777888988877775421 123 8999999999 78888889987642 23
Q ss_pred eecCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecC--ceeecccccCCChHHHHHHHHhhccHHHHHH
Q 014522 178 IHACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS--VHVLPREILGKSTFELATLMMKWLPLWLVDK 255 (423)
Q Consensus 178 ~~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (423)
++..+........+++|+|||+|.+|+|+|..|++.|.+|+++...- .|-...... .
T Consensus 481 ~~~~~~l~~~~~~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~---------------~------ 539 (671)
T 1ps9_A 481 LSYLDVLRDKAPVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQ---------------Q------ 539 (671)
T ss_dssp EEHHHHHTSCCCCCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCC---------------S------
T ss_pred eeHHHHhhCCCCCCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhccccccc---------------c------
Confidence 44444333344568999999999999999999999998776421000 000000000 0
Q ss_pred HHHHHHHHHhccccccCCCC-CCCCccccc--c------cCCCccccChhhhhhhhcCCeEEecC--ceEEeCCeEEE-c
Q 014522 256 ILLILAWFILGNTESYGLKR-PSMGPLALK--N------TMGKTPVLDIGALKKIRSGHINVVPG--IKRISCGQAEL-I 323 (423)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~------~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~~v~~-~ 323 (423)
.+... .+.. .......+. . .....+.....+.+.+++.+|+++++ +.+++.+++.+ .
T Consensus 540 ---------~~~~~--~~~~~~~~~~~~v~l~~~~~~~l~~~l~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~v~~~~ 608 (671)
T 1ps9_A 540 ---------AGGLS--PQGMQIPRSPRQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDDDGLHVVI 608 (671)
T ss_dssp ---------GGGBC--TTCCCCCCCSSEEEEECSSCSCTTTTSCTTTHHHHHHHHHHTTCEEECSCEEEEEETTEEEEEE
T ss_pred ---------ccccc--ccccccCCCCcEEEEEEecchhhccccccccHHHHHHHHHhcCCEEEeCcEEEEEeCCeEEEec
Confidence 00000 0000 000000000 0 00001112223356677889999988 78888888777 6
Q ss_pred cC--cEecccEEEEcCCCCCCCCCcccccccccCCCCCCCCCCCCCCCCCceEEEeeccccC----CCcchhHHHHHHHH
Q 014522 324 NG--EKLDIDAIVLATGYRSNVPSWLQESEFFSENGFPKAPFPHGWKGNAGLYAVGFTRRGL----SGASSDAMRIAQDI 397 (423)
Q Consensus 324 ~g--~~~~~D~vi~a~G~~~~~~~ll~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~----~~a~~~g~~~a~~i 397 (423)
+| +++++|.||+|+|++|++ .|++.+. . ..++||++|||.... ..|++||..+|.+|
T Consensus 609 ~G~~~~i~~D~Vi~a~G~~p~~-~l~~~l~---~-------------~g~~v~aiGD~~~~~~~~~~~A~~~g~~aA~~i 671 (671)
T 1ps9_A 609 NGETQVLAVDNVVICAGQEPNR-ALAQPLI---D-------------SGKTVHLIGGCDVAMELDARRAIAQGTRLALEI 671 (671)
T ss_dssp TTEEEEECCSEEEECCCEEECC-TTHHHHH---T-------------TTCCEEECGGGTCCSSCCHHHHHHHHHHHHHHC
T ss_pred CCeEEEEeCCEEEECCCccccH-HHHHHHH---h-------------cCCCEEEECCcCccCchhHHHHHHHHHHHHHhC
Confidence 77 579999999999999997 5555431 0 126899999998643 36899999999875
No 92
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.94 E-value=1.3e-28 Score=239.49 Aligned_cols=302 Identities=16% Similarity=0.162 Sum_probs=181.4
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcC--CCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHH
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQG--VPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQF 97 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g--~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (423)
|.++|||||||+||+++|..|++.+ .+|+|||+++... |............ +.+++
T Consensus 1 M~K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~-------~~p~l~~v~~g~~---------------~~~~i 58 (430)
T 3hyw_A 1 MAKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFG-------FTPAFPHLAMGWR---------------KFEDI 58 (430)
T ss_dssp -CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEE-------CGGGHHHHHHTCS---------------CGGGS
T ss_pred CCCcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCc-------cCccHHHHhcCCC---------------CHHHh
Confidence 3467999999999999999999975 7999999986421 1111000000000 00000
Q ss_pred HHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCCCCCCcee
Q 014522 98 IQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDIEGLADFGGEV 177 (423)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~~~~~~~~ 177 (423)
...+.+++.+.+++++ ..+|++++.+. +. |++.+ + +++.||+||+||| +++. +.+||+.+....+
T Consensus 59 ~~~~~~~~~~~gv~~i-~~~v~~Id~~~--~~--V~~~~------g-~~i~YD~LViAtG--~~~~-~~i~G~~e~~~~~ 123 (430)
T 3hyw_A 59 SVPLAPLLPKFNIEFI-NEKAESIDPDA--NT--VTTQS------G-KKIEYDYLVIATG--PKLV-FGAEGQEENSTSI 123 (430)
T ss_dssp EEESTTTGGGGTEEEE-CSCEEEEETTT--TE--EEETT------C-CEEECSEEEECCC--CEEE-CCSBTHHHHSCCC
T ss_pred hhcHHHHHHHCCcEEE-EeEEEEEECCC--CE--EEECC------C-CEEECCEEEEeCC--CCcc-CCccCcccCcCCc
Confidence 0011223344577755 45799998765 55 78776 5 6899999999999 5544 3577765421111
Q ss_pred eecCCCC----CC--CCCCCCEEEEECCCC------CHHHHHHH----HhccC----CccEEEEecCceeecccccCCCh
Q 014522 178 IHACDYK----SG--EKYKGKKVLVVGCGN------SGMELSLD----LSNHN----ASPSMVVRSSVHVLPREILGKST 237 (423)
Q Consensus 178 ~~~~~~~----~~--~~~~~~~v~ViG~G~------~~~e~a~~----l~~~g----~~V~~v~r~~~~~~~~~~~~~~~ 237 (423)
.+.+.. .. .....+.++|+|++. .+.|++.. +.+.+ .+|+++...+ .+.+....
T Consensus 124 -~~~~~a~~~~~~l~~~~~~~~~vv~gg~~gve~~~~~~e~a~~~~~~l~~~g~~~~v~v~~~~~~~-~l~~~~~~---- 197 (430)
T 3hyw_A 124 -CTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEP-YLGHFGVG---- 197 (430)
T ss_dssp -SSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSS-STTCTTTT----
T ss_pred -ccHHHHHHHHHHHHhhccCCceEEEeCCCcEEEhHHHHHHHHHHHHHHHHhcccccceeeeecccc-hhhhccch----
Confidence 000000 00 011234456666543 12233333 33333 3566666555 12111100
Q ss_pred HHHHHHHHhhccHHHHHHHHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEE
Q 014522 238 FELATLMMKWLPLWLVDKILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRI 315 (423)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~ 315 (423)
..+.....+.+.+++.+|+++.+ ++++
T Consensus 198 ---------------------------------------------------~~~~~~~~l~~~l~~~GV~~~~~~~v~~v 226 (430)
T 3hyw_A 198 ---------------------------------------------------GIGASKRLVEDLFAERNIDWIANVAVKAI 226 (430)
T ss_dssp ---------------------------------------------------CSTTHHHHHHHHHHHTTCEEECSCEEEEE
T ss_pred ---------------------------------------------------hhHHHHHHHHHHHHhCCeEEEeCceEEEE
Confidence 01111222345567789999988 8999
Q ss_pred eCCeEEEcc----CcEecccEEEEcCCCCCCCCCcccccc--cccC-CCCCCCCCCCCC-CCCCceEEEeeccccC----
Q 014522 316 SCGQAELIN----GEKLDIDAIVLATGYRSNVPSWLQESE--FFSE-NGFPKAPFPHGW-KGNAGLYAVGFTRRGL---- 383 (423)
Q Consensus 316 ~~~~v~~~~----g~~~~~D~vi~a~G~~~~~~~ll~~~~--~~~~-~g~~~~~~~~~~-~~~~~vya~Gd~~~~~---- 383 (423)
+.+++.+++ ++++++|.+++++|.+|+ .++...+ +.++ .|++++| ++++ ++.|+|||+|||+..+
T Consensus 227 ~~~~~~~~~~~g~~~~i~~d~vi~~~G~~~~--~~~~~~~~~l~~~~~g~i~vd-~~lq~t~~~~IfAiGD~a~~p~~~~ 303 (430)
T 3hyw_A 227 EPDKVIYEDLNGNTHEVPAKFTMFMPSFQGP--EVVASAGDKVANPANKMVIVN-RCFQNPTYKNIFGVGVVTAIPPIEK 303 (430)
T ss_dssp CSSEEEEECTTSCEEEEECSEEEEECEEECC--HHHHTTCTTTBCTTTCCBCCC-TTSBCSSSTTEEECSTTBCCCCSSC
T ss_pred eCCceEEEeeCCCceEeecceEEEeccCCCc--hHHHhcccccccCCceEEEec-ccccCCCCCCEEEeccEEecCCccc
Confidence 988887764 348999999999999998 5555443 4333 5678888 4555 8999999999998521
Q ss_pred --------C---CcchhHHHHHHHHhhhhHHHHHHHhhhhhhhhhhhhc
Q 014522 384 --------S---GASSDAMRIAQDIGKVWKEETKQQKKRTTACHRRCIS 421 (423)
Q Consensus 384 --------~---~a~~~g~~~a~~i~~~l~~~~~~~~~~~~~~~~~~~~ 421 (423)
. .|.+||+++|+||...+.+.+.+.. ...+..|+.
T Consensus 304 ~~~~~~~pk~a~~A~~qg~~~A~Ni~~~l~g~~~~~~---~~~~~~~~~ 349 (430)
T 3hyw_A 304 TPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNPDKYA---PRLSAICIA 349 (430)
T ss_dssp CSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTCCCCEE---ECCCEEEEE
T ss_pred CcCcCccchHHHHHHHHHHHHHHHHHHHhcCCCCCcc---cCCcEEEEE
Confidence 1 4889999999999999987553322 444556654
No 93
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.92 E-value=6.8e-26 Score=223.92 Aligned_cols=254 Identities=17% Similarity=0.174 Sum_probs=173.9
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHH
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQ 99 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (423)
.++||+|||||++|+++|..|++. .+|+|||+.+.+||.|....+. .+.+ +. ...++..
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~---------~~g~---------~~--~~~~~~~ 165 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIK---------QEGF---------NK--DSRKVVE 165 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSE---------ETTT---------TE--EHHHHHH
T ss_pred ccCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccc---------cCCC---------CC--CHHHHHH
Confidence 357999999999999999999999 9999999999898876542110 0010 01 2333433
Q ss_pred HHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCCCCCCceeee
Q 014522 100 YLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDIEGLADFGGEVIH 179 (423)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~~~~~~~~~~ 179 (423)
.+.+.+ +.+++++.++.|.+++... ..+.+...+. +....+.||+||+||| +.+..|.+||.+.. + ++.
T Consensus 166 ~l~~~l-~~~v~~~~~~~v~~i~~~~--~~~~~~~~~~----~~~~~~~~d~lvlAtG--a~~~~~~~~g~~~~-g-v~~ 234 (493)
T 1y56_A 166 ELVGKL-NENTKIYLETSALGVFDKG--EYFLVPVVRG----DKLIEILAKRVVLATG--AIDSTMLFENNDMP-G-VFR 234 (493)
T ss_dssp HHHHTC-CTTEEEETTEEECCCEECS--SSEEEEEEET----TEEEEEEESCEEECCC--EEECCCCCTTTTST-T-EEE
T ss_pred HHHHHH-hcCCEEEcCCEEEEEEcCC--cEEEEEEecC----CeEEEEECCEEEECCC--CCccCCCCCCCCCC-C-EEE
Confidence 333322 4477788899998888765 5554544221 1224799999999999 77878888876532 2 222
Q ss_pred cCCCC----CCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHhhccHHHHHH
Q 014522 180 ACDYK----SGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPLWLVDK 255 (423)
Q Consensus 180 ~~~~~----~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (423)
..+.. ......+++++|+|+|.+|+| ..+.+.|
T Consensus 235 ~~~~~~~~~~~~~~~~~~vvViGgG~~gle--~~l~~~G----------------------------------------- 271 (493)
T 1y56_A 235 RDFALEVMNVWEVAPGRKVAVTGSKADEVI--QELERWG----------------------------------------- 271 (493)
T ss_dssp HHHHHHHHHTSCBCSCSEEEEESTTHHHHH--HHHHHHT-----------------------------------------
T ss_pred cHHHHHHHHhcccCCCCEEEEECCCHHHHH--HHHHhCC-----------------------------------------
Confidence 11110 011235689999999999998 3333333
Q ss_pred HHHHHHHHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeCC----eEEEccCcEec
Q 014522 256 ILLILAWFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISCG----QAELINGEKLD 329 (423)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~----~v~~~~g~~~~ 329 (423)
|+++.+ +.++..+ .+.+.+|++++
T Consensus 272 --------------------------------------------------V~v~~~~~v~~i~~~~~v~~v~~~~g~~i~ 301 (493)
T 1y56_A 272 --------------------------------------------------IDYVHIPNVKRVEGNEKVERVIDMNNHEYK 301 (493)
T ss_dssp --------------------------------------------------CEEEECSSEEEEECSSSCCEEEETTCCEEE
T ss_pred --------------------------------------------------cEEEeCCeeEEEecCCceEEEEeCCCeEEE
Confidence 333322 3333322 25577888999
Q ss_pred ccEEEEcCCCCCCCCCccccccc---ccCCCCCC-CCCCCCCCCCCceEEEeeccccC--CCcchhHHHHHHHHhhhh
Q 014522 330 IDAIVLATGYRSNVPSWLQESEF---FSENGFPK-APFPHGWKGNAGLYAVGFTRRGL--SGASSDAMRIAQDIGKVW 401 (423)
Q Consensus 330 ~D~vi~a~G~~~~~~~ll~~~~~---~~~~g~~~-~~~~~~~~~~~~vya~Gd~~~~~--~~a~~~g~~~a~~i~~~l 401 (423)
+|.||+|+|+.|+. .+++.+++ .++.|++. +| .+++ +.|+||++|||++.. ..|..||+.+|.+|.+.+
T Consensus 302 aD~Vv~a~G~~p~~-~l~~~~g~~~~~~~~g~i~~vd-~~~~-s~~~vya~GD~~~~~~~~~A~~~g~~aa~~i~~~l 376 (493)
T 1y56_A 302 VDALIFADGRRPDI-NPITQAGGKLRFRRGYYSPVLD-EYHR-IKDGIYVAGSAVSIKPHYANYLEGKLVGAYILKEF 376 (493)
T ss_dssp CSEEEECCCEEECC-HHHHHTTCCEEEETTEEEECCC-TTSE-EETTEEECSTTTCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred eCEEEECCCcCcCc-hHHHhcCCCccccCCceeeccc-cccC-cCCCEEEEeccCCccCHHHHHHHHHHHHHHHHHHc
Confidence 99999999999997 67777765 24578765 66 4666 889999999998743 378999999999998876
No 94
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.68 E-value=6.8e-17 Score=137.60 Aligned_cols=160 Identities=17% Similarity=0.141 Sum_probs=112.3
Q ss_pred EEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHhhccHHHHHHHHHHHHHHHhccccccC
Q 014522 193 KVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPLWLVDKILLILAWFILGNTESYG 272 (423)
Q Consensus 193 ~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (423)
+++|||+|.+|+++|..|++.|.+|+++.+++. .++.... .. .+|
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~-~~~~~~~-~~----------~~~----------------------- 47 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGRS-KVKGVSR-VP----------NYP----------------------- 47 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCC-TTTTCSC-CC----------CST-----------------------
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCC-cccCchh-hh----------ccC-----------------------
Confidence 699999999999999999999999999999873 2221000 00 000
Q ss_pred CCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC-ceEEeCC----eEEEccCcEecccEEEEcCCCCCCCCCcc
Q 014522 273 LKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG-IKRISCG----QAELINGEKLDIDAIVLATGYRSNVPSWL 347 (423)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-i~~~~~~----~v~~~~g~~~~~D~vi~a~G~~~~~~~ll 347 (423)
..+ .....+.+...+.+.+++.+++++.+ +.++..+ .+.+++| ++++|.||+|+|..|+ ++
T Consensus 48 ----~~~------~~~~~~~~~~~l~~~~~~~gv~v~~~~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~---~~ 113 (180)
T 2ywl_A 48 ----GLL------DEPSGEELLRRLEAHARRYGAEVRPGVVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKDPT---LP 113 (180)
T ss_dssp ----TCT------TCCCHHHHHHHHHHHHHHTTCEEEECCCCEEEECSSSEEEECSSC-EEEEEEEEECCTTCCH---HH
T ss_pred ----CCc------CCCCHHHHHHHHHHHHHHcCCEEEeCEEEEEEEcCCEEEEEECCC-EEEECEEEECCCCCCC---cc
Confidence 000 00001122333445555667888776 6666542 2566677 8999999999999975 34
Q ss_pred ccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccCC----CcchhHHHHHHHHhhhhHH
Q 014522 348 QESEF-FSENGFPKAPFPHGWKGNAGLYAVGFTRRGLS----GASSDAMRIAQDIGKVWKE 403 (423)
Q Consensus 348 ~~~~~-~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~----~a~~~g~~~a~~i~~~l~~ 403 (423)
+.+++ .+ +|.+.+| ++++|+.|+|||+|||+.... .|..||+.+|.+|.+.+..
T Consensus 114 ~~~g~~~~-~g~i~vd-~~~~t~~~~i~a~GD~~~~~~~~~~~A~~~g~~aa~~i~~~~~~ 172 (180)
T 2ywl_A 114 SLLGLTRR-GAYIDTD-EGGRTSYPRVYAAGVARGKVPGHAIISAGDGAYVAVHLVSDLRG 172 (180)
T ss_dssp HHHTCCEE-TTEECCC-TTCBCSSTTEEECGGGGTCCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCCCcc-CceEEeC-CCCCcCCCCEEEeecccCcchhhHHHHHHhHHHHHHHHHHHhhh
Confidence 55566 45 8988888 578899999999999997543 6899999999999887754
No 95
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.67 E-value=8.6e-20 Score=170.88 Aligned_cols=150 Identities=11% Similarity=0.050 Sum_probs=100.4
Q ss_pred cCCeEEECCChHHHHHHHHHHH--cCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRD--QGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFI 98 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~--~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (423)
.+||+||||||||++||..|++ .|++|+|||+.+.+||......+ .. +.. .-.
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~---~~--~~~----------------~l~---- 119 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQ---LF--SAM----------------VMR---- 119 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCST---TC--CCE----------------EEE----
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCc---cC--CHH----------------HHH----
Confidence 5799999999999999999975 49999999999999886533211 00 000 000
Q ss_pred HHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCCCCCCceee
Q 014522 99 QYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDIEGLADFGGEVI 178 (423)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~~~~~~~~~ 178 (423)
.....+++++++++..+. . .....+.++++++ ..+..+.++|...+.+...
T Consensus 120 ~~~~~~~~e~Gv~~~~~~--------------------------~-~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~ 170 (326)
T 3fpz_A 120 KPAHLFLQELEIPYEDEG--------------------------D-YVVVKHAALFIST--VLSKVLQLPNVKLFNATCV 170 (326)
T ss_dssp TTTHHHHHHTTCCCEECS--------------------------S-EEEESCHHHHHHH--HHHHHHTSTTEEEETTEEE
T ss_pred HHHHHHHHHcCCEEEECC--------------------------c-ceecceeEEEEcc--hhhhccccccceeeccccc
Confidence 011223445566543211 1 2344445566666 5555566777666555444
Q ss_pred ecCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 179 HACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 179 ~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
..+..+......+++++++|+|.++++.|..+...+.+++++.+..
T Consensus 171 ~~~~~~~~~~~~~~~v~viggg~~av~~a~~~~~~~~~v~i~~~~~ 216 (326)
T 3fpz_A 171 EDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCAMDPNVIELAGY 216 (326)
T ss_dssp EEEEEESSCSSSSCEEEEEEEEEHHHHTCTTSSSCCCCEEEEESCB
T ss_pred ceeeccCCcccCCCEEEEEccCceeeehhhhhhhccCcEEEEeecc
Confidence 4444455556678999999999999999999999999999887765
No 96
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.57 E-value=1.7e-15 Score=148.45 Aligned_cols=193 Identities=17% Similarity=0.109 Sum_probs=104.3
Q ss_pred CeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcc--ccccc----C-C--ceee---c-------------------
Q 014522 23 GPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASL--WQKRT----Y-D--RLNL---H------------------- 71 (423)
Q Consensus 23 ~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~--~~~~~----~-~--~~~~---~------------------- 71 (423)
||+|||||++|+++|..|++.|.+|+|+|+. ..+|. |..+. . + .... +
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~ 79 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTS 79 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHH
Confidence 7999999999999999999999999999998 44442 11100 0 0 0000 0
Q ss_pred -CCCcc--ccCCCCCCCC--------CCC-----CCCCHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeE-EEEE
Q 014522 72 -LPKQF--CQLPKLQFPE--------DFP-----EYPTKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLW-RVKT 134 (423)
Q Consensus 72 -~~~~~--~~~~~~~~~~--------~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~-~v~~ 134 (423)
.+..+ ..-...++.. ..+ ...+...+...+.+.+++.+++++.++.| ++..++ +.. -+..
T Consensus 80 ~~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~--~~v~Gv~v 156 (472)
T 2e5v_A 80 EAKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPIIEDRLV-EIRVKD--GKVTGFVT 156 (472)
T ss_dssp HHHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCEECCCEE-EEEEET--TEEEEEEE
T ss_pred HHHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEEEECcEE-EEEEeC--CEEEEEEE
Confidence 00000 0000011110 000 11245677787877778889999999999 987765 432 2344
Q ss_pred cccCCCCCceEEEEeCEEEEccCCCCCCcCCCCC-CCCCCCceeeecC-----CCCCCCCCC-CCEEEEECCCCCHHHHH
Q 014522 135 ASSAGSTKTEFEYICRWLVVATGENAERVMPDIE-GLADFGGEVIHAC-----DYKSGEKYK-GKKVLVVGCGNSGMELS 207 (423)
Q Consensus 135 ~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~-g~~~~~~~~~~~~-----~~~~~~~~~-~~~v~ViG~G~~~~e~a 207 (423)
.+. + ..+.+|.||+|||.++ ..+..+ +.....+.-+... ...+..... ...++++|+| +++++
T Consensus 157 ~~~-----~-g~~~a~~VVlAtGg~~--~~~~~~~~~~~~tGdgi~~a~~aGa~~~d~e~~q~~p~~~~~ggg--~~~~a 226 (472)
T 2e5v_A 157 EKR-----G-LVEDVDKLVLATGGYS--YLYEYSSTQSTNIGDGMAIAFKAGTILADMEFVQFHPTVTSLDGE--VFLLT 226 (472)
T ss_dssp TTT-----E-EECCCSEEEECCCCCG--GGSSSBSSCTTCSCHHHHHHHHTTCCEECTTCEEEEEEEECGGGC--CEECC
T ss_pred EeC-----C-CeEEeeeEEECCCCCc--ccCccccCCCCCchHHHHHHHHcCCCEeCCcceEEEeEEEccCCC--ceeee
Confidence 321 2 3578999999999543 333221 1111111110000 011111111 1234556766 88888
Q ss_pred HHHhccCCccEEEEecCceeeccc
Q 014522 208 LDLSNHNASPSMVVRSSVHVLPRE 231 (423)
Q Consensus 208 ~~l~~~g~~V~~v~r~~~~~~~~~ 231 (423)
..+...|..+ +..+.. ++++..
T Consensus 227 e~~~~~G~~~-v~~~g~-rf~~~~ 248 (472)
T 2e5v_A 227 ETLRGEGAQI-INENGE-RFLFNY 248 (472)
T ss_dssp THHHHTTCEE-EETTCC-CGGGGT
T ss_pred hhhcCCceEE-ECCCCC-CCCccC
Confidence 8888888766 444444 555543
No 97
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.53 E-value=5e-14 Score=124.89 Aligned_cols=124 Identities=18% Similarity=0.085 Sum_probs=81.9
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCcc-ccCCCCCCCCCCCCCCCHHHHH
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQF-CQLPKLQFPEDFPEYPTKRQFI 98 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 98 (423)
+.+||+|||||++|+++|..|+++|.+|+|+|+.....|.|........ ....+ ..+. + ...+.+..+.
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~~~~~---~~~~~~~~~~-----d--~~g~~~~~~~ 71 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPF---PPGSLLERAY-----D--PKDERVWAFH 71 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCCCSCC---CTTCHHHHHC-----C--TTCCCHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCcccccc---chhhHHhhhc-----c--CCCCCHHHHH
Confidence 3579999999999999999999999999999997433233221100000 00000 0000 0 0012567888
Q ss_pred HHHHHHHHHc-CCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCC
Q 014522 99 QYLESYAEKF-EINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAER 162 (423)
Q Consensus 99 ~~~~~~~~~~-~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~ 162 (423)
.++.+.+++. +++++ +++|+++..++. ..+.|.+.+ + ..+++|+||+|+|.++..
T Consensus 72 ~~l~~~~~~~~gv~i~-~~~v~~i~~~~~-~v~~v~~~~------g-~~i~a~~VV~A~G~~s~~ 127 (232)
T 2cul_A 72 ARAKYLLEGLRPLHLF-QATATGLLLEGN-RVVGVRTWE------G-PPARGEKVVLAVGSFLGA 127 (232)
T ss_dssp HHHHHHHHTCTTEEEE-ECCEEEEEEETT-EEEEEEETT------S-CCEECSEEEECCTTCSSC
T ss_pred HHHHHHHHcCCCcEEE-EeEEEEEEEeCC-EEEEEEECC------C-CEEECCEEEECCCCChhh
Confidence 8888888887 88877 678999987652 234466654 4 479999999999965443
No 98
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.51 E-value=4.7e-14 Score=135.25 Aligned_cols=134 Identities=20% Similarity=0.224 Sum_probs=88.5
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCccccc---------ccCCc--eeec-CCCcccc----------
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQK---------RTYDR--LNLH-LPKQFCQ---------- 78 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~---------~~~~~--~~~~-~~~~~~~---------- 78 (423)
.+||+|||||++|+++|..|+++|.+|+|+|+.+.+|+.|.. +.... ..+. .+.....
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 83 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDF 83 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHH
Confidence 479999999999999999999999999999999877653321 00000 0000 0000000
Q ss_pred -----CCCCCC--CCCCCCCC--CHHHHHHHHHHHHHHcCCceeccceEEEEEEeCC--CCeEEEEEcccCCCCCceEEE
Q 014522 79 -----LPKLQF--PEDFPEYP--TKRQFIQYLESYAEKFEINPRFNECVQSARYDET--SGLWRVKTASSAGSTKTEFEY 147 (423)
Q Consensus 79 -----~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~--~~~~~v~~~~~~~~~~~~~~~ 147 (423)
-...++ ......|+ ....+.+++.+.+++.+++++++++|+++..+++ .+.|.|.+.+ + ++
T Consensus 84 ~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~------g--~i 155 (401)
T 2gqf_A 84 ISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNS------T--QW 155 (401)
T ss_dssp HHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETT------E--EE
T ss_pred HHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECC------C--EE
Confidence 000000 00001112 6778888899999999999999999999987610 1557777654 4 79
Q ss_pred EeCEEEEccCCCCCC
Q 014522 148 ICRWLVVATGENAER 162 (423)
Q Consensus 148 ~~d~vviAtG~~~~~ 162 (423)
++|.||+|||.++.|
T Consensus 156 ~ad~VVlAtG~~s~p 170 (401)
T 2gqf_A 156 QCKNLIVATGGLSMP 170 (401)
T ss_dssp EESEEEECCCCSSCG
T ss_pred ECCEEEECCCCccCC
Confidence 999999999976644
No 99
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.36 E-value=3.9e-12 Score=107.96 Aligned_cols=118 Identities=24% Similarity=0.405 Sum_probs=85.7
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
++||+|||||++|+++|..|++.|.+|+++|+.+..-. .. .....++.+ +......++.++
T Consensus 1 ~~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~---~~----------~~~~~~~~~------~~~~~~~~~~~~ 61 (180)
T 2ywl_A 1 MWDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVK---GV----------SRVPNYPGL------LDEPSGEELLRR 61 (180)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTT---TC----------SCCCCSTTC------TTCCCHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCccc---Cc----------hhhhccCCC------cCCCCHHHHHHH
Confidence 46899999999999999999999999999999762210 00 000011111 112467889999
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCCCCCCC
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMPDIEGL 170 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p~~~g~ 170 (423)
+.+.+++.+++++.+ +|++++.++ +.+.+++.+ + ++.+|.||+|+| ..|..+...|+
T Consensus 62 l~~~~~~~gv~v~~~-~v~~i~~~~--~~~~v~~~~------g--~i~ad~vI~A~G--~~~~~~~~~g~ 118 (180)
T 2ywl_A 62 LEAHARRYGAEVRPG-VVKGVRDMG--GVFEVETEE------G--VEKAERLLLCTH--KDPTLPSLLGL 118 (180)
T ss_dssp HHHHHHHTTCEEEEC-CCCEEEECS--SSEEEECSS------C--EEEEEEEEECCT--TCCHHHHHHTC
T ss_pred HHHHHHHcCCEEEeC-EEEEEEEcC--CEEEEEECC------C--EEEECEEEECCC--CCCCccccCCC
Confidence 999999999999999 999998765 557677654 4 799999999999 55544333343
No 100
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.35 E-value=5.1e-12 Score=121.52 Aligned_cols=133 Identities=16% Similarity=0.152 Sum_probs=89.7
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCccccccc------------CCceeecCCCcc----ccC----
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRT------------YDRLNLHLPKQF----CQL---- 79 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~------------~~~~~~~~~~~~----~~~---- 79 (423)
..+||+|||||++|+++|..|+++|.+|+|+|+.+.+|+.+.... ........+... ..+
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 105 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQD 105 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHHH
Confidence 367999999999999999999999999999999988765431100 000000000000 000
Q ss_pred -------CCCCCC--CCCCC--CCCHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEE
Q 014522 80 -------PKLQFP--EDFPE--YPTKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYI 148 (423)
Q Consensus 80 -------~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~ 148 (423)
...++. ..... ......+.+.+.+.+++.+++++++++|+++..++ +.|.|.+.+ + .++
T Consensus 106 ~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~--~~~~V~~~~------g--~i~ 175 (417)
T 3v76_A 106 FVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTA--SGFRVTTSA------G--TVD 175 (417)
T ss_dssp HHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEET--TEEEEEETT------E--EEE
T ss_pred HHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeC--CEEEEEECC------c--EEE
Confidence 000000 00000 12567888889999999999999999999998876 678788765 4 899
Q ss_pred eCEEEEccCCCCCC
Q 014522 149 CRWLVVATGENAER 162 (423)
Q Consensus 149 ~d~vviAtG~~~~~ 162 (423)
||.||+|+|.++.|
T Consensus 176 ad~VIlAtG~~S~p 189 (417)
T 3v76_A 176 AASLVVASGGKSIP 189 (417)
T ss_dssp ESEEEECCCCSSCG
T ss_pred eeEEEECCCCccCC
Confidence 99999999977644
No 101
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.30 E-value=1.8e-11 Score=117.03 Aligned_cols=135 Identities=14% Similarity=0.132 Sum_probs=85.9
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCccccc------cc----------------CCceeecCCCcccc
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQK------RT----------------YDRLNLHLPKQFCQ 78 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~------~~----------------~~~~~~~~~~~~~~ 78 (423)
.|||+||||||+|+++|..|+++|++|+|+|+.+.+|..... .. .....+..+.....
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRP 83 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCCceE
Confidence 589999999999999999999999999999998765432110 00 00000100000000
Q ss_pred C--CCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEcc
Q 014522 79 L--PKLQFPEDFPEYPTKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVAT 156 (423)
Q Consensus 79 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAt 156 (423)
. ..............+..+..++.+.+.+.+++++++++|+++..++ +.........++ +..++++|.||.|+
T Consensus 84 ~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~--~~~~~v~~~~~~---~~~~~~a~~vIgAd 158 (397)
T 3oz2_A 84 IILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKEN--GKVAGAKIRHNN---EIVDVRAKMVIAAD 158 (397)
T ss_dssp EEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEET--TEEEEEEEEETT---EEEEEEEEEEEECC
T ss_pred eeccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeecc--ceeeeeeecccc---cceEEEEeEEEeCC
Confidence 0 0000000001124788999999999999999999999999988776 442222221111 44679999999999
Q ss_pred CCCC
Q 014522 157 GENA 160 (423)
Q Consensus 157 G~~~ 160 (423)
|..+
T Consensus 159 G~~S 162 (397)
T 3oz2_A 159 GFES 162 (397)
T ss_dssp CTTC
T ss_pred cccc
Confidence 9655
No 102
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.30 E-value=1.5e-11 Score=117.92 Aligned_cols=134 Identities=16% Similarity=0.150 Sum_probs=89.2
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccc------------cCCc----------eeecCCCcc--
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKR------------TYDR----------LNLHLPKQF-- 76 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~------------~~~~----------~~~~~~~~~-- 76 (423)
.+||+|||||++|+++|..|++.|++|+|+|+.+.+|+..... .++. .....+...
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRP 83 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCCEE
Confidence 5799999999999999999999999999999987665422111 0000 000000000
Q ss_pred ccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEE-EEEcccCCCCCceEEEEeCEEEEc
Q 014522 77 CQLPKLQFPEDFPEYPTKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWR-VKTASSAGSTKTEFEYICRWLVVA 155 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~-v~~~~~~~~~~~~~~~~~d~vviA 155 (423)
..+..............+..+..++.+.+.+.+++++.+++|+++..++ +.+. |++.+.. +..++++|.||.|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~--~~v~gv~~~~~~----~~~~~~a~~vV~A 157 (397)
T 3cgv_A 84 IILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKEN--GKVAGAKIRHNN----EIVDVRAKMVIAA 157 (397)
T ss_dssp EEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEET--TEEEEEEEEETT----EEEEEEEEEEEEC
T ss_pred EEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeC--CEEEEEEEEECC----eEEEEEcCEEEEC
Confidence 0000000001111224788888999999998999999999999998875 6665 6664311 3378999999999
Q ss_pred cCCCC
Q 014522 156 TGENA 160 (423)
Q Consensus 156 tG~~~ 160 (423)
+|.++
T Consensus 158 ~G~~s 162 (397)
T 3cgv_A 158 DGFES 162 (397)
T ss_dssp CCTTC
T ss_pred CCcch
Confidence 99765
No 103
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.27 E-value=6.2e-11 Score=110.85 Aligned_cols=131 Identities=15% Similarity=0.188 Sum_probs=81.6
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccC--------------------
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQL-------------------- 79 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~-------------------- 79 (423)
|++||+|||||++|+++|..|++.|++|+|+|+.+.+||.+..........+.....+..
T Consensus 1 m~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (336)
T 1yvv_A 1 MTVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAE 80 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEE
T ss_pred CCceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCeee
Confidence 357999999999999999999999999999999988888665432222221111100000
Q ss_pred --------CC---CCCCCCCCCCCCHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEE
Q 014522 80 --------PK---LQFPEDFPEYPTKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYI 148 (423)
Q Consensus 80 --------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~ 148 (423)
.. .........+.....+......+++ +++++++++|+++...+ +.|.|++.+ +.....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--g~~i~~~~~v~~i~~~~--~~~~v~~~~------g~~~~~ 150 (336)
T 1yvv_A 81 WTPLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMRG--DMPVSFSCRITEVFRGE--EHWNLLDAE------GQNHGP 150 (336)
T ss_dssp ECCCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHHT--TCCEECSCCEEEEEECS--SCEEEEETT------SCEEEE
T ss_pred ccccceeccCcccccCCCCCccEEcCccHHHHHHHHHc--cCcEEecCEEEEEEEeC--CEEEEEeCC------CcCccc
Confidence 00 0000000111111112222233332 78999999999999876 678888766 534446
Q ss_pred eCEEEEccCCCC
Q 014522 149 CRWLVVATGENA 160 (423)
Q Consensus 149 ~d~vviAtG~~~ 160 (423)
+|+||+|+|..+
T Consensus 151 a~~vV~a~g~~~ 162 (336)
T 1yvv_A 151 FSHVIIATPAPQ 162 (336)
T ss_dssp ESEEEECSCHHH
T ss_pred cCEEEEcCCHHH
Confidence 999999999643
No 104
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.27 E-value=2.8e-11 Score=121.10 Aligned_cols=136 Identities=20% Similarity=0.187 Sum_probs=87.3
Q ss_pred cccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccc--------------cCCce---eecCCCc-cccC-
Q 014522 19 IWVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKR--------------TYDRL---NLHLPKQ-FCQL- 79 (423)
Q Consensus 19 ~~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~--------------~~~~~---~~~~~~~-~~~~- 79 (423)
.+.+||+|||||++|+++|..|++.|++|+|||+.+.+....+.. .++.+ ....... +...
T Consensus 47 ~~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 126 (570)
T 3fmw_A 47 ALTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIF 126 (570)
T ss_dssp ----CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCcc
Confidence 356899999999999999999999999999999976543111110 00000 0000000 0000
Q ss_pred ------CCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEE
Q 014522 80 ------PKLQFPEDFPEYPTKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLV 153 (423)
Q Consensus 80 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vv 153 (423)
.....+........+..+...+.+.+.+.+++++++++|+++..++ +.+.|++.+.+ +..++++|+||
T Consensus 127 ~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~--~~v~v~~~~~~----G~~~~~a~~vV 200 (570)
T 3fmw_A 127 TQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDA--EAVEVTVAGPS----GPYPVRARYGV 200 (570)
T ss_dssp TTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCS--SCEEEEEEETT----EEEEEEESEEE
T ss_pred cccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC--CeEEEEEEeCC----CcEEEEeCEEE
Confidence 0000011112235788899999999988899999999999998766 56667774211 43689999999
Q ss_pred EccCCCC
Q 014522 154 VATGENA 160 (423)
Q Consensus 154 iAtG~~~ 160 (423)
.|+|.++
T Consensus 201 ~ADG~~S 207 (570)
T 3fmw_A 201 GCDGGRS 207 (570)
T ss_dssp ECSCSSC
T ss_pred EcCCCCc
Confidence 9999765
No 105
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.26 E-value=1e-11 Score=123.83 Aligned_cols=172 Identities=15% Similarity=0.149 Sum_probs=101.1
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC-CCCcccccccC---------------Cce-e--ec-CCCccccC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE-CIASLWQKRTY---------------DRL-N--LH-LPKQFCQL 79 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~-~~gg~~~~~~~---------------~~~-~--~~-~~~~~~~~ 79 (423)
..+||+|||||++|++||..|++.|.+|+|+|+.. .+|...+.... ... . .+ ....+..+
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l 106 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRIL 106 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhh
Confidence 35899999999999999999999999999999874 33321110000 000 0 00 00000000
Q ss_pred CCCCCCCCC--CCCCCHHHHHHHHHHHHHH-cCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEcc
Q 014522 80 PKLQFPEDF--PEYPTKRQFIQYLESYAEK-FEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVAT 156 (423)
Q Consensus 80 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAt 156 (423)
....-+..+ .....+..+...+.+.+++ .++++ ++++|+.+..++. ..+.|.+.+ | ..+.||.||+||
T Consensus 107 ~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~g-~V~GV~t~d------G-~~I~Ad~VVLAT 177 (651)
T 3ces_A 107 NASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI-FQQAVEDLIVEND-RVVGAVTQM------G-LKFRAKAVVLTV 177 (651)
T ss_dssp STTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEE-EECCEEEEEESSS-BEEEEEETT------S-EEEEEEEEEECC
T ss_pred hcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEE-EEEEEEEEEecCC-EEEEEEECC------C-CEEECCEEEEcC
Confidence 000000000 0013456777888888887 58887 6778999977541 334566654 5 689999999999
Q ss_pred CCCCCCcCCCCCCCCCCCceeeecCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEe
Q 014522 157 GENAERVMPDIEGLADFGGEVIHACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVR 222 (423)
Q Consensus 157 G~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r 222 (423)
|.++ ..+.++|...+ .+.+ +| |.++++++..|.+.|.+|+.+..
T Consensus 178 Gt~s--~~~~i~G~~~~----------------~~gr---iG-g~~a~eLA~~L~~lG~~v~~~~t 221 (651)
T 3ces_A 178 GTFL--DGKIHIGLDNY----------------SGGR---AG-DPPSIPLSRRLRELPLRVGRLKT 221 (651)
T ss_dssp STTT--CCEEECC---------------------------------CCHHHHHHHTTTCCEEEECC
T ss_pred CCCc--cCccccCcccC----------------CCCC---cc-chhhhHHHHHHHhcCCeEEEecC
Confidence 9543 33345554321 1222 56 78999999999999999988853
No 106
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.24 E-value=1.9e-11 Score=119.13 Aligned_cols=137 Identities=18% Similarity=0.297 Sum_probs=88.7
Q ss_pred cccccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCccccc---------ccCC--ceeecCCC--cc-----cc
Q 014522 17 RCIWVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQK---------RTYD--RLNLHLPK--QF-----CQ 78 (423)
Q Consensus 17 ~~~~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~---------~~~~--~~~~~~~~--~~-----~~ 78 (423)
...+.+||+|||||++|+++|..|++.|.+|+|+|+.+.+|+.... +... .+....+. .+ ..
T Consensus 22 ~~~~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (447)
T 2i0z_A 22 SNAMHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSI 101 (447)
T ss_dssp ---CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHH
T ss_pred CccCCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHh
Confidence 3356789999999999999999999999999999998776642110 0000 00000000 00 00
Q ss_pred C-----------CCCCCC--C---CCCCCCCHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCe-EEEEEcccCCCC
Q 014522 79 L-----------PKLQFP--E---DFPEYPTKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGL-WRVKTASSAGST 141 (423)
Q Consensus 79 ~-----------~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~-~~v~~~~~~~~~ 141 (423)
+ ...++. . .++.......+.+.+.+.+++.+++++++++|+++..++ +. +.|.+.+
T Consensus 102 ~~~~~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~--~~v~~V~~~~----- 174 (447)
T 2i0z_A 102 FNNEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYEN--GQTKAVILQT----- 174 (447)
T ss_dssp SCHHHHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEETT-----
T ss_pred cCHHHHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecC--CcEEEEEECC-----
Confidence 0 000000 0 001111467888888888888999999999999998765 44 7787765
Q ss_pred CceEEEEeCEEEEccCCCCCC
Q 014522 142 KTEFEYICRWLVVATGENAER 162 (423)
Q Consensus 142 ~~~~~~~~d~vviAtG~~~~~ 162 (423)
+ ..+++|.||+|+|.++.|
T Consensus 175 -G-~~i~Ad~VVlAtGg~s~~ 193 (447)
T 2i0z_A 175 -G-EVLETNHVVIAVGGKSVP 193 (447)
T ss_dssp -C-CEEECSCEEECCCCSSSG
T ss_pred -C-CEEECCEEEECCCCCcCC
Confidence 5 469999999999976643
No 107
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.23 E-value=1.3e-11 Score=115.99 Aligned_cols=129 Identities=16% Similarity=0.192 Sum_probs=85.9
Q ss_pred cCCeEEECCChHHHHHHHHHHH---cCCCEEEEecCCCCCcccccccC---CceeecCCCccccCCC-------------
Q 014522 21 VNGPVIVGAGPSGLATAACLRD---QGVPFVMLERAECIASLWQKRTY---DRLNLHLPKQFCQLPK------------- 81 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~---~g~~v~lie~~~~~gg~~~~~~~---~~~~~~~~~~~~~~~~------------- 81 (423)
|+||+|||||++|+++|..|++ .|++|+|+|+...+||.+..... .....+....++....
T Consensus 1 m~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~ 80 (342)
T 3qj4_A 1 MAQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDEL 80 (342)
T ss_dssp CEEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHH
T ss_pred CCcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHH
Confidence 3589999999999999999999 89999999999999886654321 1112221111110000
Q ss_pred ----C--CCC---------CCCCCCCCHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEE
Q 014522 82 ----L--QFP---------EDFPEYPTKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFE 146 (423)
Q Consensus 82 ----~--~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~ 146 (423)
. .+. +....+.....+..+.+.++++.+++++++++|+++...+ +.|.|++.+ + ..
T Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~--~~~~v~~~~------g-~~ 151 (342)
T 3qj4_A 81 LAYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRD--DKWEVSKQT------G-SP 151 (342)
T ss_dssp HHTTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEECS--SSEEEEESS------S-CC
T ss_pred HhCCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcC--CEEEEEECC------C-CE
Confidence 0 000 0001122223344555666666689999999999999876 678888875 4 45
Q ss_pred EEeCEEEEccCC
Q 014522 147 YICRWLVVATGE 158 (423)
Q Consensus 147 ~~~d~vviAtG~ 158 (423)
+.+|.||+|+..
T Consensus 152 ~~ad~vV~A~p~ 163 (342)
T 3qj4_A 152 EQFDLIVLTMPV 163 (342)
T ss_dssp EEESEEEECSCH
T ss_pred EEcCEEEECCCH
Confidence 899999999984
No 108
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.22 E-value=1.2e-10 Score=112.60 Aligned_cols=135 Identities=14% Similarity=0.167 Sum_probs=86.7
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCC----Cccccccc---------C-----------CceeecCCCcc
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECI----ASLWQKRT---------Y-----------DRLNLHLPKQF 76 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~----gg~~~~~~---------~-----------~~~~~~~~~~~ 76 (423)
.+||+|||||++|+++|..|++.|++|+|+|+.+.+ |....... . ...........
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 84 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRGKEI 84 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEETTEE
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeCCee
Confidence 479999999999999999999999999999998632 22111100 0 00000000000
Q ss_pred ccCCCCC--CC-CCCCCCCCHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEE
Q 014522 77 CQLPKLQ--FP-EDFPEYPTKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLV 153 (423)
Q Consensus 77 ~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vv 153 (423)
..+.... .. ........+..+...+.+.+.+.+++++++++|+++...+ +.+.+.+...++ ...++++|.||
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~--~~~~v~v~~~~g---~~~~~~a~~vV 159 (421)
T 3nix_A 85 ADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFG--TDSVTTIEDING---NKREIEARFII 159 (421)
T ss_dssp EEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEET--TEEEEEEEETTS---CEEEEEEEEEE
T ss_pred EEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC--CEEEEEEEcCCC---CEEEEEcCEEE
Confidence 0000000 00 0112235788999999999998999999999999999876 454444432221 32479999999
Q ss_pred EccCCCC
Q 014522 154 VATGENA 160 (423)
Q Consensus 154 iAtG~~~ 160 (423)
+|+|.++
T Consensus 160 ~A~G~~s 166 (421)
T 3nix_A 160 DASGYGR 166 (421)
T ss_dssp ECCGGGC
T ss_pred ECCCCch
Confidence 9999654
No 109
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.19 E-value=1.6e-10 Score=113.98 Aligned_cols=138 Identities=20% Similarity=0.163 Sum_probs=90.8
Q ss_pred ccccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCccccc--------------ccCCceeecCCCccccCCC--
Q 014522 18 CIWVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQK--------------RTYDRLNLHLPKQFCQLPK-- 81 (423)
Q Consensus 18 ~~~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~--------------~~~~~~~~~~~~~~~~~~~-- 81 (423)
..+.+||+|||||++|+++|..|+++|++|+|||+.+.++..-+. +..+.+....+.....+..
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~ 87 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLP 87 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEE
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhcccccccccccee
Confidence 356889999999999999999999999999999998655321110 0111111000000000000
Q ss_pred CC---CCCCCC--CCCCHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEcc
Q 014522 82 LQ---FPEDFP--EYPTKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVAT 156 (423)
Q Consensus 82 ~~---~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAt 156 (423)
.. .....+ ....+..+...+.+.+.+.+++++++++|+++..++ +.+.+++.+.. +..++++|+||.|+
T Consensus 88 ~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~--~~v~v~~~~~~----g~~~~~a~~vVgAD 161 (500)
T 2qa1_A 88 IDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDG--AGVTVEVRGPE----GKHTLRAAYLVGCD 161 (500)
T ss_dssp EEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEET--TEEEEEEEETT----EEEEEEESEEEECC
T ss_pred cccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcC--CeEEEEEEcCC----CCEEEEeCEEEECC
Confidence 00 000011 123578888999999999999999999999999876 66667766521 33589999999999
Q ss_pred CCCCC
Q 014522 157 GENAE 161 (423)
Q Consensus 157 G~~~~ 161 (423)
|.++.
T Consensus 162 G~~S~ 166 (500)
T 2qa1_A 162 GGRSS 166 (500)
T ss_dssp CTTCH
T ss_pred CcchH
Confidence 97663
No 110
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.18 E-value=4.5e-11 Score=115.09 Aligned_cols=133 Identities=17% Similarity=0.207 Sum_probs=85.9
Q ss_pred cccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcc------ccc--------c----------cCCceeecCCC
Q 014522 19 IWVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASL------WQK--------R----------TYDRLNLHLPK 74 (423)
Q Consensus 19 ~~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~------~~~--------~----------~~~~~~~~~~~ 74 (423)
...+||+|||||++|+++|..|+++|++|+|+|+.+.+... +.. + ....+......
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~ 100 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDFR 100 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEETT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEECC
Confidence 35789999999999999999999999999999998654310 000 0 00001100000
Q ss_pred ---ccccCCCCCCC---CCCCCCCCHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEE
Q 014522 75 ---QFCQLPKLQFP---EDFPEYPTKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYI 148 (423)
Q Consensus 75 ---~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~ 148 (423)
....++..... ........+..+...+.+.+.+ ++++++++|+++...+ +.+.|++.+ + .+++
T Consensus 101 ~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~--~~v~v~~~~------g-~~~~ 169 (407)
T 3rp8_A 101 SGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDA--DGVTVWFTD------G-SSAS 169 (407)
T ss_dssp TCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEET--TEEEEEETT------S-CEEE
T ss_pred CCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecC--CcEEEEEcC------C-CEEe
Confidence 00000000000 0111224678888888887766 7889999999999887 677788776 5 5899
Q ss_pred eCEEEEccCCCCCC
Q 014522 149 CRWLVVATGENAER 162 (423)
Q Consensus 149 ~d~vviAtG~~~~~ 162 (423)
+|.||.|+|.++..
T Consensus 170 a~~vV~AdG~~S~v 183 (407)
T 3rp8_A 170 GDLLIAADGSHSAL 183 (407)
T ss_dssp ESEEEECCCTTCSS
T ss_pred eCEEEECCCcChHH
Confidence 99999999976543
No 111
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.18 E-value=2.2e-11 Score=120.13 Aligned_cols=141 Identities=16% Similarity=0.086 Sum_probs=88.7
Q ss_pred cccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCcee-ecCCCccccCCCCCCCCCCCCCCCHHHH
Q 014522 19 IWVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLN-LHLPKQFCQLPKLQFPEDFPEYPTKRQF 97 (423)
Q Consensus 19 ~~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (423)
...+||+|||||++|+++|..|++.|++|+|||+.+.+|+....+.++... .......... ...+............+
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~-~~~~~~~~~~~~~~~~l 168 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKF-YGRFCTGTLDHISIRQL 168 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHH-CTTTTCTTCCEEEHHHH
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccc-cccccccccccCCHHHH
Confidence 457899999999999999999999999999999988776431111111000 0000000000 00000000111356788
Q ss_pred HHHHHHHHHHcCCceeccceEEEEEEeC-CCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCC
Q 014522 98 IQYLESYAEKFEINPRFNECVQSARYDE-TSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAER 162 (423)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~v~~v~~~~-~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~ 162 (423)
.+++.+.+.+.+++++++++|+++.... +...|.|++.+..+ ++..++++|+||+|+|..+.+
T Consensus 169 ~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~--g~~~~i~ad~VV~A~G~~S~~ 232 (497)
T 2bry_A 169 QLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPP--AQLASYEFDVLISAAGGKFVP 232 (497)
T ss_dssp HHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCC--HHHHTCCBSEEEECCCTTCCC
T ss_pred HHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCC--CCEEEEEcCEEEECCCCCccc
Confidence 8889888888999999999999998642 22456677732100 122468999999999965543
No 112
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.16 E-value=1.7e-10 Score=115.60 Aligned_cols=135 Identities=13% Similarity=0.114 Sum_probs=87.3
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccc-----c--------ccCC-----------ceeec--CCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQ-----K--------RTYD-----------RLNLH--LPK 74 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~-----~--------~~~~-----------~~~~~--~~~ 74 (423)
.+||+|||||++|+++|..|++.|++|+|+|+.+.++.... . +.++ ..... ...
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 102 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWGQDQ 102 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECSSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEecCCC
Confidence 47999999999999999999999999999999854321100 0 0000 00000 000
Q ss_pred c--cccCCCCC---CCCCCCCCCCHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEe
Q 014522 75 Q--FCQLPKLQ---FPEDFPEYPTKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYIC 149 (423)
Q Consensus 75 ~--~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 149 (423)
. .+.+.... +.........+..+..++.+.+.+.|++++.+++|+++...+ ...+.|++.+ + ++..++++
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~-g~~~~V~~~~-~---G~~~~i~A 177 (591)
T 3i3l_A 103 APWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSD-PDRVVLTVRR-G---GESVTVES 177 (591)
T ss_dssp CCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCS-TTCEEEEEEE-T---TEEEEEEE
T ss_pred ccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-CCEEEEEEec-C---CceEEEEc
Confidence 0 00000000 000111234788999999999999999999999999998753 2566677763 1 13368999
Q ss_pred CEEEEccCCCC
Q 014522 150 RWLVVATGENA 160 (423)
Q Consensus 150 d~vviAtG~~~ 160 (423)
|.||.|+|..+
T Consensus 178 dlVV~AdG~~S 188 (591)
T 3i3l_A 178 DFVIDAGGSGG 188 (591)
T ss_dssp SEEEECCGGGC
T ss_pred CEEEECCCCcc
Confidence 99999999654
No 113
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.15 E-value=2.3e-10 Score=112.81 Aligned_cols=137 Identities=16% Similarity=0.098 Sum_probs=90.0
Q ss_pred cccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCccccc--------------ccCCceeecCCCccccCCC--C
Q 014522 19 IWVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQK--------------RTYDRLNLHLPKQFCQLPK--L 82 (423)
Q Consensus 19 ~~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~--------------~~~~~~~~~~~~~~~~~~~--~ 82 (423)
.+.+||+|||||++|+++|..|+++|++|+|||+.+.++...+. +..+.+....+.....+.. .
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~ 89 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPV 89 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecceec
Confidence 46789999999999999999999999999999997654321111 0111110000000000000 0
Q ss_pred ---CCCCCCC--CCCCHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccC
Q 014522 83 ---QFPEDFP--EYPTKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATG 157 (423)
Q Consensus 83 ---~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG 157 (423)
..+...+ ....+..+...+.+.+.+.+++++++++|+++..++ +.+.+++.+.. +..++++|+||.|+|
T Consensus 90 ~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~--~~v~v~~~~~~----g~~~~~a~~vVgADG 163 (499)
T 2qa2_A 90 DFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEG--DHVVVEVEGPD----GPRSLTTRYVVGCDG 163 (499)
T ss_dssp EGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECS--SCEEEEEECSS----CEEEEEEEEEEECCC
T ss_pred ccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC--CEEEEEEEcCC----CcEEEEeCEEEEccC
Confidence 0001111 123678889999999999999999999999998876 56667766521 235899999999999
Q ss_pred CCCC
Q 014522 158 ENAE 161 (423)
Q Consensus 158 ~~~~ 161 (423)
.++.
T Consensus 164 ~~S~ 167 (499)
T 2qa2_A 164 GRST 167 (499)
T ss_dssp TTCH
T ss_pred cccH
Confidence 8663
No 114
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.14 E-value=8.1e-11 Score=116.95 Aligned_cols=172 Identities=17% Similarity=0.093 Sum_probs=106.1
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC-CCCcccccccCCce---ee----c-CCC-----------ccccC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE-CIASLWQKRTYDRL---NL----H-LPK-----------QFCQL 79 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~-~~gg~~~~~~~~~~---~~----~-~~~-----------~~~~~ 79 (423)
..+||+|||||+||++||..|++.|.+|+|+|+.. .+|...+....... .+ . ... .+..+
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l 105 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKML 105 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeec
Confidence 45899999999999999999999999999999974 33321110000000 00 0 000 00000
Q ss_pred CCCCCCCCC--CCCCCHHHHHHHHHHHHHH-cCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEcc
Q 014522 80 PKLQFPEDF--PEYPTKRQFIQYLESYAEK-FEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVAT 156 (423)
Q Consensus 80 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAt 156 (423)
....-+..+ .....+..+...+.+.+++ .++++ ++++|+.+..++. ..+.|.+.+ + ..+.||.||+||
T Consensus 106 ~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~g-~V~GV~t~d------G-~~i~AdaVVLAT 176 (637)
T 2zxi_A 106 NTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYI-KQEEVVDIIVKNN-QVVGVRTNL------G-VEYKTKAVVVTT 176 (637)
T ss_dssp STTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEE-EESCEEEEEESSS-BEEEEEETT------S-CEEECSEEEECC
T ss_pred ccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEE-EEeEEEEEEecCC-EEEEEEECC------C-cEEEeCEEEEcc
Confidence 000000000 0012567788888888887 48887 5788999887651 233466655 5 589999999999
Q ss_pred CCCCCCcCCCCCCCCCCCceeeecCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEe
Q 014522 157 GENAERVMPDIEGLADFGGEVIHACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVR 222 (423)
Q Consensus 157 G~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r 222 (423)
|. .+..+.++|...+ . ..+ + ++.++++++..|.+.|.++..+.+
T Consensus 177 G~--~s~~~~~~G~~~~-----~-----------~Gr---~-G~~~A~~la~~L~~lG~~v~~l~t 220 (637)
T 2zxi_A 177 GT--FLNGVIYIGDKMI-----P-----------GGR---L-GEPRSEGLSDFYRRFDFPLIRFKT 220 (637)
T ss_dssp TT--CBTCEEEETTEEE-----E-----------CSB---T-TBCCBCTHHHHHHHTTCCCEEEEE
T ss_pred CC--CccCceeccceec-----C-----------CCC---C-CchhHHHHHHHHHhcCCceEEecC
Confidence 94 4444445554321 1 111 2 367889999999999999877765
No 115
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.13 E-value=4.7e-10 Score=110.95 Aligned_cols=133 Identities=22% Similarity=0.352 Sum_probs=84.7
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCC-------cccccccCCc----------eeecCCCcc-ccCCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIA-------SLWQKRTYDR----------LNLHLPKQF-CQLPK 81 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~g-------g~~~~~~~~~----------~~~~~~~~~-~~~~~ 81 (423)
+.+||+|||||++|+++|..|++.|++|+|+|+.+.++ +.|....... ......... ..+..
T Consensus 106 ~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~ 185 (549)
T 3nlc_A 106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKD 185 (549)
T ss_dssp CCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEecc
Confidence 45899999999999999999999999999999986552 2222211100 000000000 00000
Q ss_pred --------------CCCCC-----CCCCC--CCHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCC
Q 014522 82 --------------LQFPE-----DFPEY--PTKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGS 140 (423)
Q Consensus 82 --------------~~~~~-----~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~ 140 (423)
...+. ..+.. .....+...+.+.+.+.+++++++++|+++..++. ..+.|++.+
T Consensus 186 ~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~-~v~gV~l~~---- 260 (549)
T 3nlc_A 186 PNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDG-QITGVTLSN---- 260 (549)
T ss_dssp TTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSS-BEEEEEETT----
T ss_pred ccccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCC-EEEEEEECC----
Confidence 00000 00000 12356777788888888999999999999987652 344577765
Q ss_pred CCceEEEEeCEEEEccCCCC
Q 014522 141 TKTEFEYICRWLVVATGENA 160 (423)
Q Consensus 141 ~~~~~~~~~d~vviAtG~~~ 160 (423)
+ .++.+|.||+|+|.++
T Consensus 261 --G-~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 261 --G-EEIKSRHVVLAVGHSA 277 (549)
T ss_dssp --S-CEEECSCEEECCCTTC
T ss_pred --C-CEEECCEEEECCCCCh
Confidence 4 5799999999999755
No 116
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.13 E-value=3e-10 Score=110.35 Aligned_cols=63 Identities=11% Similarity=0.092 Sum_probs=51.5
Q ss_pred CHHHHHHHHHHHHHHcCCceeccc---eEEEEEEeCCCCeEE-EEEcccCCCCCceEEEEeCEEEEccCCCCCCcC
Q 014522 93 TKRQFIQYLESYAEKFEINPRFNE---CVQSARYDETSGLWR-VKTASSAGSTKTEFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~---~v~~v~~~~~~~~~~-v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~ 164 (423)
....+...+.+.+.+.|++++.++ +|+++..++ +.+. |.+.+ + .+++||.||+|+|.++....
T Consensus 159 ~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~--~~v~gV~t~~------G-~~i~Ad~VV~AtG~~s~~l~ 225 (438)
T 3dje_A 159 HARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFEN--NDVKGAVTAD------G-KIWRAERTFLCAGASAGQFL 225 (438)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEET--TEEEEEEETT------T-EEEECSEEEECCGGGGGGTS
T ss_pred cHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecC--CeEEEEEECC------C-CEEECCEEEECCCCChhhhc
Confidence 456788888888999999999999 999998876 6766 77765 5 68999999999998765443
No 117
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.13 E-value=7.8e-10 Score=111.06 Aligned_cols=139 Identities=18% Similarity=0.221 Sum_probs=89.5
Q ss_pred cccCCeEEECCChHHHHHHHHHHHc------CCCEEEEecCCCCCccccccc--C--------Cc---------------
Q 014522 19 IWVNGPVIVGAGPSGLATAACLRDQ------GVPFVMLERAECIASLWQKRT--Y--------DR--------------- 67 (423)
Q Consensus 19 ~~~~~vvIIGaG~aGl~~A~~L~~~------g~~v~lie~~~~~gg~~~~~~--~--------~~--------------- 67 (423)
+|.+||+|||||++|+++|..|+++ |++|+|||+.+.+|+...... . +.
T Consensus 33 ~~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~~~~~ 112 (584)
T 2gmh_A 33 AEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTED 112 (584)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEECCEE
T ss_pred ccCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeeeechh
Confidence 3578999999999999999999999 999999999877664311100 0 00
Q ss_pred -eeecCCCccccCCCCC---CCCCCCCCCCHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcc----cCC
Q 014522 68 -LNLHLPKQFCQLPKLQ---FPEDFPEYPTKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTAS----SAG 139 (423)
Q Consensus 68 -~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~----~~~ 139 (423)
+..........++..+ ..........+..+..++.+.+.+.+++++++++|+++..+++.....|.+.+ .++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G 192 (584)
T 2gmh_A 113 RFGILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDG 192 (584)
T ss_dssp EEEEECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTS
T ss_pred heeeeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCC
Confidence 0000000001111011 00011122478889999999999999999999999999876532233355542 111
Q ss_pred CCCc-------eEEEEeCEEEEccCCCC
Q 014522 140 STKT-------EFEYICRWLVVATGENA 160 (423)
Q Consensus 140 ~~~~-------~~~~~~d~vviAtG~~~ 160 (423)
. ..++++|+||+|+|.++
T Consensus 193 ---~~~~~~~~g~~i~Ad~VV~AdG~~S 217 (584)
T 2gmh_A 193 ---APKTTFERGLELHAKVTIFAEGCHG 217 (584)
T ss_dssp ---CEEEEEECCCEEECSEEEECCCTTC
T ss_pred ---CcccccCCceEEECCEEEEeeCCCc
Confidence 1 14799999999999755
No 118
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.12 E-value=3.5e-10 Score=107.29 Aligned_cols=63 Identities=22% Similarity=0.246 Sum_probs=49.9
Q ss_pred CHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCC
Q 014522 93 TKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMP 165 (423)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p 165 (423)
....+...+.+.+.+.+++++.+++|+++..++ +.+.|.+.+ + ++++|.||+|+|.++....+
T Consensus 147 ~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~--~~~~v~~~~------g--~~~a~~vV~a~G~~s~~l~~ 209 (372)
T 2uzz_A 147 RSELAIKTWIQLAKEAGCAQLFNCPVTAIRHDD--DGVTIETAD------G--EYQAKKAIVCAGTWVKDLLP 209 (372)
T ss_dssp EHHHHHHHHHHHHHHTTCEEECSCCEEEEEECS--SSEEEEESS------C--EEEEEEEEECCGGGGGGTST
T ss_pred cHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcC--CEEEEEECC------C--eEEcCEEEEcCCccHHhhcc
Confidence 345777888888888999999999999998866 557777654 4 59999999999987655443
No 119
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.12 E-value=8.9e-10 Score=109.18 Aligned_cols=137 Identities=20% Similarity=0.263 Sum_probs=86.9
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCC----CCcccccc----------cCCce-----ee------cCCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAEC----IASLWQKR----------TYDRL-----NL------HLPK 74 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~----~gg~~~~~----------~~~~~-----~~------~~~~ 74 (423)
+.+||+|||||++|+++|..|++.|++|+|||+.+. .|..+... .++.+ .. ....
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~ 85 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWGK 85 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECSS
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEecC
Confidence 457999999999999999999999999999999862 22211110 00000 00 0000
Q ss_pred c----cccCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEE-EEEcccCCCCCceEEEE
Q 014522 75 Q----FCQLPKLQF-PEDFPEYPTKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWR-VKTASSAGSTKTEFEYI 148 (423)
Q Consensus 75 ~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~-v~~~~~~~~~~~~~~~~ 148 (423)
. .+.+...+. .........+..+..++.+.+.+.+++++++++|+++..++ +... |.+...++ ...+++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~--~~v~gv~~~~~dG---~~~~i~ 160 (512)
T 3e1t_A 86 EPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEG--ERAVGVRYRNTEG---VELMAH 160 (512)
T ss_dssp CSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEET--TEEEEEEEECSSS---CEEEEE
T ss_pred CccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEEC--CEEEEEEEEeCCC---CEEEEE
Confidence 0 000000000 00111225788999999999999999999999999998865 4322 44433221 225899
Q ss_pred eCEEEEccCCCCC
Q 014522 149 CRWLVVATGENAE 161 (423)
Q Consensus 149 ~d~vviAtG~~~~ 161 (423)
+|.||+|+|.++.
T Consensus 161 ad~VI~AdG~~S~ 173 (512)
T 3e1t_A 161 ARFIVDASGNRTR 173 (512)
T ss_dssp EEEEEECCCTTCS
T ss_pred cCEEEECCCcchH
Confidence 9999999997554
No 120
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.11 E-value=7.7e-11 Score=117.50 Aligned_cols=173 Identities=16% Similarity=0.169 Sum_probs=104.1
Q ss_pred cccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC-CCCcccccccC---------------Ccee---ecC-CCcccc
Q 014522 19 IWVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE-CIASLWQKRTY---------------DRLN---LHL-PKQFCQ 78 (423)
Q Consensus 19 ~~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~-~~gg~~~~~~~---------------~~~~---~~~-~~~~~~ 78 (423)
...+||+|||||++|+++|..|++.|.+|+|+|+.. .+|+.++.... .... .+. ...+..
T Consensus 19 ~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~ 98 (641)
T 3cp8_A 19 SHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRM 98 (641)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEE
T ss_pred cCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhh
Confidence 357899999999999999999999999999999874 34543322100 0000 000 000000
Q ss_pred CCCCCCCCCC--CCCCCHHHHHHHHHHHHHHc-CCceeccceEEEEEEeCCCCeEE-EEEcccCCCCCceEEEEeCEEEE
Q 014522 79 LPKLQFPEDF--PEYPTKRQFIQYLESYAEKF-EINPRFNECVQSARYDETSGLWR-VKTASSAGSTKTEFEYICRWLVV 154 (423)
Q Consensus 79 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~v~~~~~~~~~~-v~~~~~~~~~~~~~~~~~d~vvi 154 (423)
+....-+... .....+..+...+.+.+++. ++++ ++..|+.+..++ +.+. |.+.+ + ..+.||.||+
T Consensus 99 l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I-~~~~V~~L~~d~--g~V~GV~t~~------G-~~i~Ad~VVL 168 (641)
T 3cp8_A 99 LNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDL-LQDTVIGVSANS--GKFSSVTVRS------G-RAIQAKAAIL 168 (641)
T ss_dssp ECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEE-EECCEEEEEEET--TEEEEEEETT------S-CEEEEEEEEE
T ss_pred cccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEE-EeeEEEEEEecC--CEEEEEEECC------C-cEEEeCEEEE
Confidence 0000000000 01235667888888888775 8886 466899887765 5443 66654 4 5899999999
Q ss_pred ccCCCCCCcCCCCCCCCCCCceeeecCCCCCCCCCCCCEEEEECCCCCHHHHHHHHhccCCccEEEEe
Q 014522 155 ATGENAERVMPDIEGLADFGGEVIHACDYKSGEKYKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVR 222 (423)
Q Consensus 155 AtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r 222 (423)
|||.++.. +.++|... .. ..++ + ++.++++++..|.+.|.+|..+..
T Consensus 169 ATG~~s~~--~i~~G~~~-----~~-----------~g~~--v-G~~~a~~la~~L~~~G~kv~~l~t 215 (641)
T 3cp8_A 169 ACGTFLNG--LIHIGMDH-----FP-----------GGRS--T-AEPPVEGLTESLASLGFSFGRLKT 215 (641)
T ss_dssp CCTTCBTC--EEEETTEE-----EE-----------CSSS--T-TSCCBCSHHHHHHHTTCCEEEEEE
T ss_pred CcCCCCCc--cceeeeee-----ec-----------cccc--c-CCchhhhhHHHHHhCCceEEeecC
Confidence 99954332 22222221 10 0111 1 367889999999999999876644
No 121
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.11 E-value=5e-10 Score=111.65 Aligned_cols=135 Identities=20% Similarity=0.174 Sum_probs=89.8
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccc--------------c----------CCce------e
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKR--------------T----------YDRL------N 69 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~--------------~----------~~~~------~ 69 (423)
+.+||+|||||++|+++|..|+++|++|+|||+.+..+..-+.. . .... .
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 83 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIRL 83 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEEE
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeeeE
Confidence 45799999999999999999999999999999986543211100 0 0000 0
Q ss_pred ecC--CCccc----cCCC-----CCCCCCCCCCCCHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCC----eEEEEE
Q 014522 70 LHL--PKQFC----QLPK-----LQFPEDFPEYPTKRQFIQYLESYAEKFEINPRFNECVQSARYDETSG----LWRVKT 134 (423)
Q Consensus 70 ~~~--~~~~~----~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~----~~~v~~ 134 (423)
... ...+. .+.. ............+..+..++.+.+.+.+++++++++|+++..++ + .+.+++
T Consensus 84 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~--~~~~~~v~v~~ 161 (535)
T 3ihg_A 84 AESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHD--DDAGAGVTARL 161 (535)
T ss_dssp ESSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEEC--GGGCSEEEEEE
T ss_pred EeccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECC--CCccccEEEEE
Confidence 000 00000 0000 00000112235788999999999999999999999999999876 5 666776
Q ss_pred cccCCCCCceEEEEeCEEEEccCCCC
Q 014522 135 ASSAGSTKTEFEYICRWLVVATGENA 160 (423)
Q Consensus 135 ~~~~~~~~~~~~~~~d~vviAtG~~~ 160 (423)
.+.+ +..++++|+||.|+|.++
T Consensus 162 ~~~~----~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 162 AGPD----GEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp EETT----EEEEEEEEEEEECCCTTC
T ss_pred EcCC----CeEEEEeCEEEECCCCcc
Confidence 6521 236899999999999765
No 122
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.08 E-value=5.6e-10 Score=106.33 Aligned_cols=61 Identities=16% Similarity=-0.002 Sum_probs=49.3
Q ss_pred CCCHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCC
Q 014522 91 YPTKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAE 161 (423)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~ 161 (423)
......+...+.+.+.+.+++++.+++|+++...+ +.|.|.+.+ + ++++|.||+|+|.++.
T Consensus 160 ~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~--~~~~v~~~~------g--~~~a~~vV~A~G~~s~ 220 (382)
T 1ryi_A 160 HVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDG--EALFIKTPS------G--DVWANHVVVASGVWSG 220 (382)
T ss_dssp BCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECSS--SSEEEEETT------E--EEEEEEEEECCGGGTH
T ss_pred EEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEEC--CEEEEEcCC------c--eEEcCEEEECCChhHH
Confidence 34567888888888889999999999999998765 566676654 4 7999999999997654
No 123
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.08 E-value=6.2e-10 Score=106.00 Aligned_cols=125 Identities=15% Similarity=0.139 Sum_probs=84.2
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCccccc--------------cc----------CCceeecCCC-c
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQK--------------RT----------YDRLNLHLPK-Q 75 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~--------------~~----------~~~~~~~~~~-~ 75 (423)
.+||+|||||++|+++|..|++.|++|+|+|+.+.+++.-.. +. ...+...... .
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~~ 90 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNKS 90 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETTEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCCce
Confidence 579999999999999999999999999999998765421000 00 0000000000 0
Q ss_pred cccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEc
Q 014522 76 FCQLPKLQFPEDFPEYPTKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVA 155 (423)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviA 155 (423)
...+ +.+........+..+.+++.+.+.+.+++++++++|+++.. + + .|++.+ + .++++|+||+|
T Consensus 91 ~~~~---~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~--~--~v~~~~------g-~~~~ad~vV~A 155 (379)
T 3alj_A 91 VSKE---TFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP-V--G--RLTLQT------G-EVLEADLIVGA 155 (379)
T ss_dssp EEEE---CGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET-T--T--EEEETT------S-CEEECSEEEEC
T ss_pred eeec---cCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe-C--C--EEEECC------C-CEEEcCEEEEC
Confidence 0000 00000012246788999999999888999999999999876 2 3 577765 4 47999999999
Q ss_pred cCCCC
Q 014522 156 TGENA 160 (423)
Q Consensus 156 tG~~~ 160 (423)
+|..+
T Consensus 156 dG~~s 160 (379)
T 3alj_A 156 DGVGS 160 (379)
T ss_dssp CCTTC
T ss_pred CCccH
Confidence 99654
No 124
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.07 E-value=2.1e-10 Score=109.77 Aligned_cols=136 Identities=16% Similarity=0.128 Sum_probs=84.3
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCC------C-c-cccc--------ccCC----------ceeecCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECI------A-S-LWQK--------RTYD----------RLNLHLP 73 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~------g-g-~~~~--------~~~~----------~~~~~~~ 73 (423)
|.+||+|||||++|+++|..|++.|++|+|+|+.+.. + | .+.. +.++ .+.....
T Consensus 1 m~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~ 80 (394)
T 1k0i_A 1 MKTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFA 80 (394)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEET
T ss_pred CCccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEEC
Confidence 3579999999999999999999999999999987631 1 1 1110 0000 0000000
Q ss_pred CccccCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEE-cccCCCCCc-eEEEEeC
Q 014522 74 KQFCQLPKLQFP-EDFPEYPTKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKT-ASSAGSTKT-EFEYICR 150 (423)
Q Consensus 74 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~-~~~~~~~~~-~~~~~~d 150 (423)
.....+...... ........+..+...+.+.+.+.+++++++++|+++...+. +.+.|++ .+ + ..++++|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~-~~~~v~~~~~------g~~~~~~a~ 153 (394)
T 1k0i_A 81 GQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQG-ERPYVTFERD------GERLRLDCD 153 (394)
T ss_dssp TEEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTS-SSCEEEEEET------TEEEEEECS
T ss_pred CceEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecC-CceEEEEecC------CcEEEEEeC
Confidence 000000000000 00111235677778888878788999999999999976532 3455766 43 4 2379999
Q ss_pred EEEEccCCCCCC
Q 014522 151 WLVVATGENAER 162 (423)
Q Consensus 151 ~vviAtG~~~~~ 162 (423)
.||.|+|.++..
T Consensus 154 ~vV~AdG~~S~v 165 (394)
T 1k0i_A 154 YIAGCDGFHGIS 165 (394)
T ss_dssp EEEECCCTTCST
T ss_pred EEEECCCCCcHH
Confidence 999999976653
No 125
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.07 E-value=3.6e-10 Score=110.26 Aligned_cols=136 Identities=14% Similarity=0.135 Sum_probs=86.3
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCC--Ccccccc-----cCCceeecCCC-----------ccccCCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECI--ASLWQKR-----TYDRLNLHLPK-----------QFCQLPK 81 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~--gg~~~~~-----~~~~~~~~~~~-----------~~~~~~~ 81 (423)
+.+||+|||||++|+++|..|++.|++|+|+|+.+.+ |..+... .+..+.+..+. ..+....
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 84 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDM 84 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCC
Confidence 3589999999999999999999999999999998653 2222110 00000000000 0000000
Q ss_pred ---CCCCCCCCCCCCHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEE-EEEccc-CCCCCceEEEEeCEEEEcc
Q 014522 82 ---LQFPEDFPEYPTKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWR-VKTASS-AGSTKTEFEYICRWLVVAT 156 (423)
Q Consensus 82 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~-v~~~~~-~~~~~~~~~~~~d~vviAt 156 (423)
..++. ......+..+.+.+.+.+.+.+++++.+++|+++..++ +.+. |++.+. ++ ...++++|.||.|+
T Consensus 85 ~~~~~~~~-~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~--~~v~gv~~~~~~~G---~~~~~~ad~VV~Ad 158 (453)
T 3atr_A 85 QTVWTVNG-EGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFED--GYVKGAVLFNRRTN---EELTVYSKVVVEAT 158 (453)
T ss_dssp SCEEEEEE-EEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEET--TEEEEEEEEETTTT---EEEEEECSEEEECC
T ss_pred ceEEeECC-CcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEEC--CEEEEEEEEEcCCC---ceEEEEcCEEEECc
Confidence 00000 01124678888999998888999999999999998765 4432 444321 11 22489999999999
Q ss_pred CCCCC
Q 014522 157 GENAE 161 (423)
Q Consensus 157 G~~~~ 161 (423)
|.++.
T Consensus 159 G~~s~ 163 (453)
T 3atr_A 159 GYSRS 163 (453)
T ss_dssp GGGCT
T ss_pred CCchh
Confidence 96554
No 126
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.06 E-value=1.5e-09 Score=109.00 Aligned_cols=139 Identities=17% Similarity=0.176 Sum_probs=87.6
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCccccccc------CCce----ee-cCCCcc------------
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRT------YDRL----NL-HLPKQF------------ 76 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~------~~~~----~~-~~~~~~------------ 76 (423)
..+||+|||||++|+++|..|+++|.+|+|+|+.+..||...... .... .+ +.+..+
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~ 204 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNIN 204 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 368999999999999999999999999999999988776422110 0000 00 000000
Q ss_pred ------------------ccCCCCCCCC-------CCC-------CCCCHHHHHHHHHHHHHHcCCceeccceEEEEEEe
Q 014522 77 ------------------CQLPKLQFPE-------DFP-------EYPTKRQFIQYLESYAEKFEINPRFNECVQSARYD 124 (423)
Q Consensus 77 ------------------~~~~~~~~~~-------~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~ 124 (423)
+.-...++.. .++ .......+...+.+.+.+.+++++++++|+++..+
T Consensus 205 ~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~ 284 (571)
T 1y0p_A 205 DPALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKD 284 (571)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEEC
T ss_pred CHHHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEeEEc
Confidence 0000011100 000 11245788888999999999999999999999875
Q ss_pred CCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCC
Q 014522 125 ETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAE 161 (423)
Q Consensus 125 ~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~ 161 (423)
++...+-|.+.+.++ +...+.+|.||+|||.++.
T Consensus 285 ~~g~v~Gv~~~~~~g---~~~~i~a~~VVlAtGg~~~ 318 (571)
T 1y0p_A 285 DKGTVKGILVKGMYK---GYYWVKADAVILATGGFAK 318 (571)
T ss_dssp TTSCEEEEEEEETTT---EEEEEECSEEEECCCCCTT
T ss_pred CCCeEEEEEEEeCCC---cEEEEECCeEEEeCCCccc
Confidence 422333344432121 3347999999999997553
No 127
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.06 E-value=9.6e-10 Score=112.67 Aligned_cols=60 Identities=12% Similarity=0.169 Sum_probs=50.1
Q ss_pred CHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCC
Q 014522 93 TKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAE 161 (423)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~ 161 (423)
....+...+.+.+.+.|++++++++|+++..++ +.|.|.+.+ + .++.+|.||+|+|.++.
T Consensus 415 ~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~--~~v~V~t~~------G-~~i~Ad~VVlAtG~~s~ 474 (676)
T 3ps9_A 415 CPAELTRNVLELAQQQGLQIYYQYQLQNFSRKD--DCWLLNFAG------D-QQATHSVVVLANGHQIS 474 (676)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEESCCEEEEEEET--TEEEEEETT------S-CEEEESEEEECCGGGGG
T ss_pred CHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeC--CeEEEEECC------C-CEEECCEEEECCCcchh
Confidence 457788888888888999999999999999877 678787765 4 46999999999997654
No 128
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.06 E-value=6e-10 Score=106.83 Aligned_cols=130 Identities=15% Similarity=0.144 Sum_probs=82.1
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCC-----CcccccccCCce------ee-------cCCC--ccccCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECI-----ASLWQKRTYDRL------NL-------HLPK--QFCQLP 80 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~-----gg~~~~~~~~~~------~~-------~~~~--~~~~~~ 80 (423)
.+||+|||||++|+++|..|++.|++|+|+|+.+.+ |+.+........ .+ ..+. .++...
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~ 105 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVNIADEK 105 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceEEECCC
Confidence 469999999999999999999999999999997643 222211100000 00 0000 000000
Q ss_pred CC---CC--CC---CCCCCCCHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEE
Q 014522 81 KL---QF--PE---DFPEYPTKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWL 152 (423)
Q Consensus 81 ~~---~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~v 152 (423)
.. .. +. .......+..+.+++.+.+. +..++++++|+++..++ +.+.|++.+ + .++++|+|
T Consensus 106 g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~--~~v~v~~~~------g-~~~~ad~v 174 (398)
T 2xdo_A 106 GNILSTKNVKPENRFDNPEINRNDLRAILLNSLE--NDTVIWDRKLVMLEPGK--KKWTLTFEN------K-PSETADLV 174 (398)
T ss_dssp SEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSC--TTSEEESCCEEEEEECS--SSEEEEETT------S-CCEEESEE
T ss_pred CCchhhccccccCCCCCceECHHHHHHHHHhhcC--CCEEEECCEEEEEEECC--CEEEEEECC------C-cEEecCEE
Confidence 00 00 10 00112367777777766543 35789999999998876 667788765 4 47999999
Q ss_pred EEccCCCCC
Q 014522 153 VVATGENAE 161 (423)
Q Consensus 153 viAtG~~~~ 161 (423)
|.|+|.++.
T Consensus 175 V~AdG~~S~ 183 (398)
T 2xdo_A 175 ILANGGMSK 183 (398)
T ss_dssp EECSCTTCS
T ss_pred EECCCcchh
Confidence 999997654
No 129
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.05 E-value=3.9e-10 Score=108.15 Aligned_cols=132 Identities=15% Similarity=0.040 Sum_probs=86.5
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCc------cccc--------ccCCc----------eeecCCC--
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIAS------LWQK--------RTYDR----------LNLHLPK-- 74 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg------~~~~--------~~~~~----------~~~~~~~-- 74 (423)
.+||+|||||++|+++|..|++.|++|+|+|+.+.+.. .+.. +.++. +......
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g~ 85 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGE 85 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETTE
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCCC
Confidence 57999999999999999999999999999999765411 0000 00000 0000000
Q ss_pred ccccCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHc-CCceeccceEEEEEEeCCCCeE--EEEEcccCCCCCceEEEEeC
Q 014522 75 QFCQLPKLQFP-EDFPEYPTKRQFIQYLESYAEKF-EINPRFNECVQSARYDETSGLW--RVKTASSAGSTKTEFEYICR 150 (423)
Q Consensus 75 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~v~~~~~~~~~--~v~~~~~~~~~~~~~~~~~d 150 (423)
....++..... ........+..+.+.+.+.+.+. +++++++++|+++..++ +.+ .|++.+ + .++++|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~--~~v~g~v~~~~------g-~~~~ad 156 (399)
T 2x3n_A 86 LLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDE--RHAIDQVRLND------G-RVLRPR 156 (399)
T ss_dssp EEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECT--TSCEEEEEETT------S-CEEEEE
T ss_pred EEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcC--CceEEEEEECC------C-CEEECC
Confidence 00000000000 00112357889999999988887 89999999999998876 555 677765 4 489999
Q ss_pred EEEEccCCCCC
Q 014522 151 WLVVATGENAE 161 (423)
Q Consensus 151 ~vviAtG~~~~ 161 (423)
.||+|+|.++.
T Consensus 157 ~vV~AdG~~s~ 167 (399)
T 2x3n_A 157 VVVGADGIASY 167 (399)
T ss_dssp EEEECCCTTCH
T ss_pred EEEECCCCChH
Confidence 99999997553
No 130
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.04 E-value=7.4e-10 Score=105.31 Aligned_cols=59 Identities=19% Similarity=0.159 Sum_probs=49.4
Q ss_pred CHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCC
Q 014522 93 TKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAE 161 (423)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~ 161 (423)
....+...+.+.+.+.|++++.+++|+++..++ +.|.|.+.+ + +++||.||+|+|.++.
T Consensus 152 ~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~--~~~~V~t~~------g--~i~a~~VV~A~G~~s~ 210 (381)
T 3nyc_A 152 DTDALHQGYLRGIRRNQGQVLCNHEALEIRRVD--GAWEVRCDA------G--SYRAAVLVNAAGAWCD 210 (381)
T ss_dssp CHHHHHHHHHHHHHHTTCEEESSCCCCEEEEET--TEEEEECSS------E--EEEESEEEECCGGGHH
T ss_pred CHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeC--CeEEEEeCC------C--EEEcCEEEECCChhHH
Confidence 557788888888889999999999999999876 567777664 4 7999999999997653
No 131
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.04 E-value=7e-10 Score=104.92 Aligned_cols=63 Identities=17% Similarity=0.223 Sum_probs=50.2
Q ss_pred CHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCC
Q 014522 93 TKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAE 161 (423)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~ 161 (423)
....+...+.+.+++.|++++.+++|+++..+++ +.+.|.+.+. +..++++|.||+|+|.++.
T Consensus 148 ~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~-~~~~v~~~~g-----~~~~~~a~~VV~A~G~~s~ 210 (369)
T 3dme_A 148 DSHALMLAYQGDAESDGAQLVFHTPLIAGRVRPE-GGFELDFGGA-----EPMTLSCRVLINAAGLHAP 210 (369)
T ss_dssp CHHHHHHHHHHHHHHTTCEEECSCCEEEEEECTT-SSEEEEECTT-----SCEEEEEEEEEECCGGGHH
T ss_pred CHHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCC-ceEEEEECCC-----ceeEEEeCEEEECCCcchH
Confidence 4677888888888999999999999999988652 3477777651 2358999999999998654
No 132
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.02 E-value=1.3e-09 Score=99.45 Aligned_cols=137 Identities=15% Similarity=0.131 Sum_probs=81.9
Q ss_pred ccCCeEEECCChHHHHHHHHHHHc-CCCEEEEecCCCCCc-ccccc-cCCceeecCCC-ccccCCCCCCCCCCCC--CCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQ-GVPFVMLERAECIAS-LWQKR-TYDRLNLHLPK-QFCQLPKLQFPEDFPE--YPT 93 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~-g~~v~lie~~~~~gg-~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~ 93 (423)
..+||+|||||++|+++|..|++. |.+|+|+|+.+.+|+ .|... ....+....+. .++.-...++...... ...
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~ 117 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKH 117 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESC
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecC
Confidence 357999999999999999999997 999999999987765 44321 11111111000 0000001111111000 114
Q ss_pred HHHHHHHHHHHHHH-cCCceeccceEEEEEEeCCCCeE-EEEEcc-----c--CCCCCceEEEEeCEEEEccCC
Q 014522 94 KRQFIQYLESYAEK-FEINPRFNECVQSARYDETSGLW-RVKTAS-----S--AGSTKTEFEYICRWLVVATGE 158 (423)
Q Consensus 94 ~~~~~~~~~~~~~~-~~~~~~~~~~v~~v~~~~~~~~~-~v~~~~-----~--~~~~~~~~~~~~d~vviAtG~ 158 (423)
...+...+.+.+.+ .+++++.+++|+++..++ +.. .+.+.. . ++..++...+++|.||+|+|.
T Consensus 118 ~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~--~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~ 189 (284)
T 1rp0_A 118 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG--NRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGH 189 (284)
T ss_dssp HHHHHHHHHHHHHTSTTEEEEETEEEEEEEEET--TEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCS
T ss_pred HHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecC--CeEEEEEEeccccccccCccccCceEEEECCEEEECCCC
Confidence 56676666666655 689999999999998765 332 244321 0 000012368999999999994
No 133
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.01 E-value=3.9e-09 Score=105.80 Aligned_cols=139 Identities=14% Similarity=0.134 Sum_probs=87.2
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccc--c----CCce----eec-C----------------
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKR--T----YDRL----NLH-L---------------- 72 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~--~----~~~~----~~~-~---------------- 72 (423)
..+||+|||||++|+++|..|+++|.+|+|||+.+.+||..... . .... ... .
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~~ 199 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQN 199 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 56799999999999999999999999999999998776532110 0 0000 000 0
Q ss_pred -CC--------------cc--ccC--------CCCCCCCCC---CCCCCHHHHHHHHHHHHHHcCCceeccceEEEEEEe
Q 014522 73 -PK--------------QF--CQL--------PKLQFPEDF---PEYPTKRQFIQYLESYAEKFEINPRFNECVQSARYD 124 (423)
Q Consensus 73 -~~--------------~~--~~~--------~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~ 124 (423)
+. .+ ... ....++... ........+...+.+.+.+.+++++++++|+++..+
T Consensus 200 ~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~ 279 (566)
T 1qo8_A 200 DIKLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVN 279 (566)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEEEC
T ss_pred CHHHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEC
Confidence 00 00 000 000111000 011346788888999999999999999999999875
Q ss_pred CCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCC
Q 014522 125 ETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAE 161 (423)
Q Consensus 125 ~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~ 161 (423)
++...+-|.+.+.++ +...+++|.||+|||.++.
T Consensus 280 ~~g~v~Gv~~~~~~g---~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 280 DDHSVVGAVVHGKHT---GYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp TTSBEEEEEEEETTT---EEEEEEEEEEEECCCCCTT
T ss_pred CCCcEEEEEEEeCCC---cEEEEEcCEEEEecCCccc
Confidence 422333344442111 3347999999999997654
No 134
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.00 E-value=1.4e-09 Score=104.31 Aligned_cols=130 Identities=15% Similarity=0.154 Sum_probs=81.3
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCC----C-ccccc----------ccCCceeecCCCc---cccC-C
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECI----A-SLWQK----------RTYDRLNLHLPKQ---FCQL-P 80 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~----g-g~~~~----------~~~~~~~~~~~~~---~~~~-~ 80 (423)
+.+||+|||||++|+++|..|++.|++|+|+|+.+.. | |.+.. +..+ .....+.. +... .
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~-~~~~~~~~~~~~~~~~~ 82 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVEL-DSISVPSSSMEYVDALT 82 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCG-GGTCBCCCEEEEEETTT
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCcc-ccccccccceEEEecCC
Confidence 3579999999999999999999999999999997653 1 11000 0000 00000000 0000 0
Q ss_pred CCCCC--CCCCCCCCHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCC
Q 014522 81 KLQFP--EDFPEYPTKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGE 158 (423)
Q Consensus 81 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~ 158 (423)
..... ...........+.+.+.+.+ .+++++++++|+++..++ +.+.|++.+ + .++++|+||.|+|.
T Consensus 83 g~~~~~~~~~~~~~~~~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~--~~v~v~~~~------g-~~~~ad~vV~AdG~ 151 (397)
T 2vou_A 83 GERVGSVPADWRFTSYDSIYGGLYELF--GPERYHTSKCLVGLSQDS--ETVQMRFSD------G-TKAEANWVIGADGG 151 (397)
T ss_dssp CCEEEEEECCCCEEEHHHHHHHHHHHH--CSTTEETTCCEEEEEECS--SCEEEEETT------S-CEEEESEEEECCCT
T ss_pred CCccccccCcccccCHHHHHHHHHHhC--CCcEEEcCCEEEEEEecC--CEEEEEECC------C-CEEECCEEEECCCc
Confidence 00000 00001134566666666554 478899999999998876 667788765 5 57999999999997
Q ss_pred CCC
Q 014522 159 NAE 161 (423)
Q Consensus 159 ~~~ 161 (423)
.+.
T Consensus 152 ~S~ 154 (397)
T 2vou_A 152 ASV 154 (397)
T ss_dssp TCH
T ss_pred chh
Confidence 553
No 135
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.99 E-value=2e-09 Score=102.66 Aligned_cols=59 Identities=17% Similarity=0.137 Sum_probs=47.8
Q ss_pred CHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCC
Q 014522 93 TKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAE 161 (423)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~ 161 (423)
....+...+.+.+.+.+++++.+++|+++...+ +.+.|.+.+ + ++++|.||+|+|.++.
T Consensus 148 ~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~--~~~~v~~~~------g--~~~a~~vV~A~G~~~~ 206 (389)
T 2gf3_A 148 FSENCIRAYRELAEARGAKVLTHTRVEDFDISP--DSVKIETAN------G--SYTADKLIVSMGAWNS 206 (389)
T ss_dssp EHHHHHHHHHHHHHHTTCEEECSCCEEEEEECS--SCEEEEETT------E--EEEEEEEEECCGGGHH
T ss_pred eHHHHHHHHHHHHHHCCCEEEcCcEEEEEEecC--CeEEEEeCC------C--EEEeCEEEEecCccHH
Confidence 346778888888889999999999999998865 557676654 3 7999999999997654
No 136
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.98 E-value=3.8e-09 Score=108.44 Aligned_cols=61 Identities=11% Similarity=0.169 Sum_probs=49.6
Q ss_pred CHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceE-EEEeCEEEEccCCCCCC
Q 014522 93 TKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEF-EYICRWLVVATGENAER 162 (423)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~-~~~~d~vviAtG~~~~~ 162 (423)
....+...+.+.+.+.|++++.+++|+++..++ +.|.|.+.+ + . ++++|.||+|+|.++..
T Consensus 410 ~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~--~~v~V~t~~------G-~~~i~Ad~VVlAtG~~s~~ 471 (689)
T 3pvc_A 410 CPSDLTHALMMLAQQNGMTCHYQHELQRLKRID--SQWQLTFGQ------S-QAAKHHATVILATGHRLPE 471 (689)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEESCCEEEEEECS--SSEEEEEC-------C-CCCEEESEEEECCGGGTTC
T ss_pred CHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeC--CeEEEEeCC------C-cEEEECCEEEECCCcchhc
Confidence 456778888888888999999999999999876 567777765 4 3 79999999999987543
No 137
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.98 E-value=9.4e-09 Score=102.61 Aligned_cols=134 Identities=14% Similarity=0.123 Sum_probs=84.7
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccc--------------cC--------Cc------eeecC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKR--------------TY--------DR------LNLHL 72 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~--------------~~--------~~------~~~~~ 72 (423)
.+||+|||||++|+++|..|++.|++|+|||+.+.++...+.. .. +. .....
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 105 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVTR 105 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEESS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEecc
Confidence 4699999999999999999999999999999987654221110 00 00 00000
Q ss_pred --CCccccCCCCCC--------CCCCCCCCCHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCC
Q 014522 73 --PKQFCQLPKLQF--------PEDFPEYPTKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTK 142 (423)
Q Consensus 73 --~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~ 142 (423)
...+..+..... .........+..+..++.+.+.+. ++++++|+++..++ +.+.+++.+..+ +
T Consensus 106 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~~~--~~v~v~~~~~~~--G 178 (549)
T 2r0c_A 106 VGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER---LRTRSRLDSFEQRD--DHVRATITDLRT--G 178 (549)
T ss_dssp BTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG---EECSEEEEEEEECS--SCEEEEEEETTT--C
T ss_pred CCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh---cccCcEEEEEEEeC--CEEEEEEEECCC--C
Confidence 000101110000 000011246778888888887776 88999999998876 566676654221 1
Q ss_pred ceEEEEeCEEEEccCCCCC
Q 014522 143 TEFEYICRWLVVATGENAE 161 (423)
Q Consensus 143 ~~~~~~~d~vviAtG~~~~ 161 (423)
...++++|+||.|+|.++.
T Consensus 179 ~~~~i~a~~vVgADG~~S~ 197 (549)
T 2r0c_A 179 ATRAVHARYLVACDGASSP 197 (549)
T ss_dssp CEEEEEEEEEEECCCTTCH
T ss_pred CEEEEEeCEEEECCCCCcH
Confidence 2368999999999997653
No 138
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.98 E-value=4.6e-09 Score=101.08 Aligned_cols=136 Identities=18% Similarity=0.097 Sum_probs=84.2
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCC-EEEEecCCCCCcccccc--------------cCC----------ceeecCCCc
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVP-FVMLERAECIASLWQKR--------------TYD----------RLNLHLPKQ 75 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~-v~lie~~~~~gg~~~~~--------------~~~----------~~~~~~~~~ 75 (423)
.+||+|||||++|+++|..|++.|++ |+|+|+.+.++...... .++ .+.......
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~~~g 83 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQSG 83 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEECTTS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEcCCC
Confidence 47999999999999999999999999 99999987553211110 000 000000000
Q ss_pred --cccCCCC-CCCCCCC-CCCCHHHHHHHHHHHHHH-cC-CceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEe
Q 014522 76 --FCQLPKL-QFPEDFP-EYPTKRQFIQYLESYAEK-FE-INPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYIC 149 (423)
Q Consensus 76 --~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 149 (423)
....+.. ......+ ....+..+.+++.+.+.+ .+ +.++++++|+++.. + +.+.+++.+..+ +...++++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~--~~v~v~~~~~~~--g~~~~~~a 158 (410)
T 3c96_A 84 ATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-R--DGRVLIGARDGH--GKPQALGA 158 (410)
T ss_dssp CEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-E--TTEEEEEEEETT--SCEEEEEE
T ss_pred CEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-C--CccEEEEecCCC--CCceEEec
Confidence 0000000 0000011 124677888888887776 46 57999999999987 4 456666653111 12257999
Q ss_pred CEEEEccCCCCC
Q 014522 150 RWLVVATGENAE 161 (423)
Q Consensus 150 d~vviAtG~~~~ 161 (423)
|+||.|+|..+.
T Consensus 159 d~vV~AdG~~S~ 170 (410)
T 3c96_A 159 DVLVGADGIHSA 170 (410)
T ss_dssp SEEEECCCTTCH
T ss_pred CEEEECCCccch
Confidence 999999997654
No 139
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.98 E-value=3.7e-09 Score=105.66 Aligned_cols=65 Identities=15% Similarity=0.007 Sum_probs=48.9
Q ss_pred CHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCC
Q 014522 93 TKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENA 160 (423)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~ 160 (423)
....+...+...+.+.|+.++.+++|+++..++. +.+.|++.+..+ ++...+++|.||+|+|.|+
T Consensus 168 d~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g-~v~gV~~~d~~t--g~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 168 DDARLTLEIMKEAVARGAVALNYMKVESFIYDQG-KVVGVVAKDRLT--DTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEESEEEEEEEEETT-EEEEEEEEETTT--CCEEEEEEEEEEECCGGGH
T ss_pred cHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCC-eEEEEEEEEcCC--CceEEEECCEEEECCCcch
Confidence 4567777788888889999999999999988752 234566654221 1346899999999999865
No 140
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.97 E-value=3.1e-09 Score=101.13 Aligned_cols=58 Identities=16% Similarity=-0.019 Sum_probs=48.0
Q ss_pred CHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEE-EEEcccCCCCCceEEEEeCEEEEccCCCC
Q 014522 93 TKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWR-VKTASSAGSTKTEFEYICRWLVVATGENA 160 (423)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~-v~~~~~~~~~~~~~~~~~d~vviAtG~~~ 160 (423)
....+...+.+.+.+.+++++.+++|+++..++ +.+. |.+.+ + ++++|.||+|+|.++
T Consensus 147 ~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~--~~v~gv~~~~------g--~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 147 DPFEATTAFAVKAKEYGAKLLEYTEVKGFLIEN--NEIKGVKTNK------G--IIKTGIVVNATNAWA 205 (382)
T ss_dssp CHHHHHHHHHHHHHHTTCEEECSCCEEEEEESS--SBEEEEEETT------E--EEECSEEEECCGGGH
T ss_pred CHHHHHHHHHHHHHHCCCEEECCceEEEEEEEC--CEEEEEEECC------c--EEECCEEEECcchhH
Confidence 567788888888889999999999999998865 6665 66654 4 799999999999765
No 141
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.95 E-value=3.2e-09 Score=101.89 Aligned_cols=60 Identities=13% Similarity=0.015 Sum_probs=47.7
Q ss_pred CCHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCC
Q 014522 92 PTKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENA 160 (423)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~ 160 (423)
.....+...+.+.+++.+++++.+++|+++..++. ..+.|.+.+ + ++++|.||+|+|.++
T Consensus 171 ~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~-~~~~v~~~~------g--~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 171 AKHDHVAWAFARKANEMGVDIIQNCEVTGFIKDGE-KVTGVKTTR------G--TIHAGKVALAGAGHS 230 (405)
T ss_dssp CCHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSS-BEEEEEETT------C--CEEEEEEEECCGGGH
T ss_pred CCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCC-EEEEEEeCC------c--eEECCEEEECCchhH
Confidence 35567888888888889999999999999987642 346676654 4 699999999999754
No 142
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.95 E-value=6.4e-09 Score=105.68 Aligned_cols=138 Identities=18% Similarity=0.172 Sum_probs=87.9
Q ss_pred cCCeEEECCChHHHHHHHHHHH-cCCCEEEEecCCCCCcccccc--------------cC----------CceeecCC--
Q 014522 21 VNGPVIVGAGPSGLATAACLRD-QGVPFVMLERAECIASLWQKR--------------TY----------DRLNLHLP-- 73 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~-~g~~v~lie~~~~~gg~~~~~--------------~~----------~~~~~~~~-- 73 (423)
.+||+|||||++|+++|..|++ .|++|+|||+.+.++...+.. .. .......+
T Consensus 32 ~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 111 (639)
T 2dkh_A 32 QVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPDP 111 (639)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEECT
T ss_pred CCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCCC
Confidence 5799999999999999999999 999999999986543221110 00 00000000
Q ss_pred ---Cccc---cCCCCCCC--CCCCCCCCHHHHHHHHHHHHHHcCC--ceeccceEEEEEEeCC--CCeEEEEEcc----c
Q 014522 74 ---KQFC---QLPKLQFP--EDFPEYPTKRQFIQYLESYAEKFEI--NPRFNECVQSARYDET--SGLWRVKTAS----S 137 (423)
Q Consensus 74 ---~~~~---~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~v~~~~~--~~~~~v~~~~----~ 137 (423)
.... .++..... ........+..+..++.+.+.+.++ +++++++|+++..+++ ...+.|++.+ .
T Consensus 112 ~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~ 191 (639)
T 2dkh_A 112 GQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAH 191 (639)
T ss_dssp TSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGG
T ss_pred CCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccC
Confidence 0000 00000000 0001124678899999999999976 8999999999987652 1246666553 1
Q ss_pred CCCCCceEEEEeCEEEEccCCCCC
Q 014522 138 AGSTKTEFEYICRWLVVATGENAE 161 (423)
Q Consensus 138 ~~~~~~~~~~~~d~vviAtG~~~~ 161 (423)
++ +..++++|+||.|+|.++.
T Consensus 192 ~G---~~~~i~a~~vVgADG~~S~ 212 (639)
T 2dkh_A 192 AG---QIETVQARYVVGCDGARSN 212 (639)
T ss_dssp TT---CEEEEEEEEEEECCCTTCH
T ss_pred CC---CeEEEEeCEEEECCCcchH
Confidence 21 3368999999999997663
No 143
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.94 E-value=2.3e-09 Score=99.01 Aligned_cols=106 Identities=17% Similarity=0.202 Sum_probs=66.2
Q ss_pred ccCCeEEECCChHHHHHHHHHHHc--CCCEEEEecCCCCC-cccccccC-CceeecCCC-ccccCCCCCCCC--CCCCCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQ--GVPFVMLERAECIA-SLWQKRTY-DRLNLHLPK-QFCQLPKLQFPE--DFPEYP 92 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~--g~~v~lie~~~~~g-g~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~--~~~~~~ 92 (423)
..+||+|||||++|+++|..|+++ |++|+|+|+...+| +.|..... ......... .+..-...++.. .+....
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~G~~~~~~ 157 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYEDEGDYVVVK 157 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCEECSSEEEES
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcccccCCeEEEe
Confidence 468999999999999999999998 99999999987775 45633221 111111100 000000111110 000112
Q ss_pred CHHHHHHHHHHHHHH-cCCceeccceEEEEEEeC
Q 014522 93 TKRQFIQYLESYAEK-FEINPRFNECVQSARYDE 125 (423)
Q Consensus 93 ~~~~~~~~~~~~~~~-~~~~~~~~~~v~~v~~~~ 125 (423)
...++.+.+.+.+.+ .+++++.++.|+++..++
T Consensus 158 ~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~ 191 (344)
T 3jsk_A 158 HAALFTSTVLSKVLQRPNVKLFNATTVEDLITRK 191 (344)
T ss_dssp CHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEE
T ss_pred cHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecC
Confidence 356666777777776 488999999999887654
No 144
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.90 E-value=5.1e-09 Score=100.49 Aligned_cols=128 Identities=19% Similarity=0.175 Sum_probs=74.5
Q ss_pred CeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcc--------ccc--------ccCCce-------e-ecCCCccc-
Q 014522 23 GPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASL--------WQK--------RTYDRL-------N-LHLPKQFC- 77 (423)
Q Consensus 23 ~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~--------~~~--------~~~~~~-------~-~~~~~~~~- 77 (423)
+|+||||||+|+++|..|+++|++|+|+|+.+.+... +.. ...+.+ . ......+.
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~~ 82 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFYN 82 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEEC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEec
Confidence 7999999999999999999999999999997644211 000 000000 0 00000000
Q ss_pred ------cCCCCCCC--CCCCC----CCCHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceE
Q 014522 78 ------QLPKLQFP--EDFPE----YPTKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEF 145 (423)
Q Consensus 78 ------~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~ 145 (423)
.......+ ..... ...+..+.+.+. +..+..++++++|++++..++ +...|++.+ | .
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~---~~~~~~v~~~~~v~~~~~~~~-~~v~v~~~d------G-~ 151 (412)
T 4hb9_A 83 ERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILN---KGLANTIQWNKTFVRYEHIEN-GGIKIFFAD------G-S 151 (412)
T ss_dssp TTSCEEEC--------------CEEEEEHHHHHHHHH---TTCTTTEECSCCEEEEEECTT-SCEEEEETT------S-C
T ss_pred CCcceecccCCccccccccccccceEeeHHHHHHHHH---hhccceEEEEEEEEeeeEcCC-CeEEEEECC------C-C
Confidence 00000000 00000 013444444433 334557899999999987653 556677776 5 6
Q ss_pred EEEeCEEEEccCCCCC
Q 014522 146 EYICRWLVVATGENAE 161 (423)
Q Consensus 146 ~~~~d~vviAtG~~~~ 161 (423)
++++|+||.|.|..|.
T Consensus 152 ~~~adlvVgADG~~S~ 167 (412)
T 4hb9_A 152 HENVDVLVGADGSNSK 167 (412)
T ss_dssp EEEESEEEECCCTTCH
T ss_pred EEEeeEEEECCCCCcc
Confidence 8999999999997664
No 145
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.90 E-value=5.5e-09 Score=100.03 Aligned_cols=57 Identities=23% Similarity=0.122 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCC
Q 014522 94 KRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENA 160 (423)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~ 160 (423)
...+...+.+.+.+.+++++.+++|+++..++ +.+.|.+.+ + ++++|.||+|+|.++
T Consensus 152 ~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~--~~v~v~t~~------g--~i~a~~VV~A~G~~s 208 (397)
T 2oln_A 152 VRGTLAALFTLAQAAGATLRAGETVTELVPDA--DGVSVTTDR------G--TYRAGKVVLACGPYT 208 (397)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEET--TEEEEEESS------C--EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEECCCEEEEEEEcC--CeEEEEECC------C--EEEcCEEEEcCCcCh
Confidence 45667777778888899999999999998876 566666543 3 799999999999754
No 146
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.90 E-value=1.4e-08 Score=100.53 Aligned_cols=61 Identities=25% Similarity=0.265 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeC-EEEEccCCCC
Q 014522 96 QFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICR-WLVVATGENA 160 (423)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d-~vviAtG~~~ 160 (423)
.+...+.+.+++.+++++++++|+++..+++....-|.+.+. ++..+++++ .||+|||.++
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~----g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQY----GKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEET----TEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEEC----CcEEEEEeCCeEEEeCCChh
Confidence 788888888888999999999999998863323333444431 144579995 9999999765
No 147
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.88 E-value=3e-08 Score=99.43 Aligned_cols=139 Identities=19% Similarity=0.154 Sum_probs=86.3
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCccccccc------CCc----eeec-CCCcc------------
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRT------YDR----LNLH-LPKQF------------ 76 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~------~~~----~~~~-~~~~~------------ 76 (423)
..+||+|||+|++|+++|..|++.|.+|+|+|+.+.+||...... ... .... ....+
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~ 204 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNIN 204 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 367999999999999999999999999999999987776422110 000 0000 00000
Q ss_pred ------------------ccCCCCCC-----------CCCC---CCCCCHHHHHHHHHHHHHHcCCceeccceEEEEEEe
Q 014522 77 ------------------CQLPKLQF-----------PEDF---PEYPTKRQFIQYLESYAEKFEINPRFNECVQSARYD 124 (423)
Q Consensus 77 ------------------~~~~~~~~-----------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~ 124 (423)
+.-...++ +... ........+...+.+.+.+.+++++++++|+++..+
T Consensus 205 ~~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~ 284 (572)
T 1d4d_A 205 DPELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTDIRLNSRVVRILED 284 (572)
T ss_dssp CHHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEEC
T ss_pred CHHHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCCeEEecCEEEEEEEC
Confidence 00000111 0000 001236678888999999999999999999999765
Q ss_pred CCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCC
Q 014522 125 ETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAE 161 (423)
Q Consensus 125 ~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~ 161 (423)
++...+-|.+.+.++ +...+.+|.||+|||.++.
T Consensus 285 ~~g~v~GV~~~~~~G---~~~~i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 285 ASGKVTGVLVKGEYT---GYYVIKADAVVIAAGGFAK 318 (572)
T ss_dssp --CCEEEEEEEETTT---EEEEEECSEEEECCCCCTT
T ss_pred CCCeEEEEEEEeCCC---cEEEEEcCEEEEeCCCCcc
Confidence 312333354442111 3357999999999996543
No 148
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.87 E-value=2.4e-09 Score=96.67 Aligned_cols=51 Identities=20% Similarity=0.281 Sum_probs=43.0
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceee
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNL 70 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~ 70 (423)
|..||+||||||+|++||..|+++|++|+|||+.+.+||.+.....+...+
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~~~~~~~~~ 51 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGAL 51 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccccccCCcee
Confidence 568999999999999999999999999999999999999776544444333
No 149
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.86 E-value=2.6e-08 Score=101.49 Aligned_cols=140 Identities=13% Similarity=0.138 Sum_probs=85.8
Q ss_pred ccCCeEEECCChHHHHHHHHHHH-----cCCCEEEEecCCCCCccccc--------------c----------cCCceee
Q 014522 20 WVNGPVIVGAGPSGLATAACLRD-----QGVPFVMLERAECIASLWQK--------------R----------TYDRLNL 70 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~-----~g~~v~lie~~~~~gg~~~~--------------~----------~~~~~~~ 70 (423)
..+||+||||||+|+++|..|++ .|++|+|||+.+.....-+. + ....+..
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~~~tle~l~~lGl~~~l~~~~~~~~~~~~ 86 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNLGLADKILSEANDMSTIAL 86 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTTTCHHHHHTTCBCCCEEEE
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEChHHHHHHHHCCCHHHHHHhccccceEEE
Confidence 35799999999999999999999 99999999987543211000 0 0000100
Q ss_pred cCCC---ccc---cCCCCCCC-CCCC-CCCCHHHHHHHHHHHHHHcC---CceeccceEEEEEEeC------CCCeEEEE
Q 014522 71 HLPK---QFC---QLPKLQFP-EDFP-EYPTKRQFIQYLESYAEKFE---INPRFNECVQSARYDE------TSGLWRVK 133 (423)
Q Consensus 71 ~~~~---~~~---~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~v~~~~------~~~~~~v~ 133 (423)
..+. .+. .++..... .... ....+..+..++.+.+.+.+ ++++++++|+++..+. +.....++
T Consensus 87 ~~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~~~~~~V~v~ 166 (665)
T 1pn0_A 87 YNPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAYPVTMT 166 (665)
T ss_dssp EEECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCTTCCCEEEE
T ss_pred EeCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccccCCCCCEEEE
Confidence 0000 000 00000000 0111 12477888899988888877 8999999999998764 11244455
Q ss_pred Eccc---------------------------------------CCCCCceEEEEeCEEEEccCCCCC
Q 014522 134 TASS---------------------------------------AGSTKTEFEYICRWLVVATGENAE 161 (423)
Q Consensus 134 ~~~~---------------------------------------~~~~~~~~~~~~d~vviAtG~~~~ 161 (423)
+.+. .+ +...++++|+||.|.|..+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~--G~~~~i~A~~VVGADG~~S~ 231 (665)
T 1pn0_A 167 LRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEA--GEIETVHCKYVIGCDGGHSW 231 (665)
T ss_dssp EEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCT--TCEEEEEEEEEEECCCTTCH
T ss_pred EEecccccccccccccccccccccccccccccccccccccccCCC--CceEEEEeCEEEeccCCCCH
Confidence 4421 01 13368999999999997653
No 150
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.85 E-value=1.8e-08 Score=92.58 Aligned_cols=105 Identities=19% Similarity=0.338 Sum_probs=66.5
Q ss_pred cCCeEEECCChHHHHHHHHHHHc--CCCEEEEecCCCCC-ccccccc-CCceeecCCC-ccccCCCCCCCCC--CCCCCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQ--GVPFVMLERAECIA-SLWQKRT-YDRLNLHLPK-QFCQLPKLQFPED--FPEYPT 93 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~--g~~v~lie~~~~~g-g~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~ 93 (423)
.+||+|||||++|+++|..|++. |.+|+|+|+.+.+| +.|.... +......... ....-...++... +.....
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~g~~~~~~~ 144 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKH 144 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEECSSEEEESC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccccCCCeEEEcc
Confidence 46999999999999999999999 99999999988776 5664321 1111111100 0000011111111 001114
Q ss_pred HHHHHHHHHHHHHHc-CCceeccceEEEEEEeC
Q 014522 94 KRQFIQYLESYAEKF-EINPRFNECVQSARYDE 125 (423)
Q Consensus 94 ~~~~~~~~~~~~~~~-~~~~~~~~~v~~v~~~~ 125 (423)
...+...+.+.+.+. +++++.+++|+++..+.
T Consensus 145 ~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~ 177 (326)
T 2gjc_A 145 AALFISTVLSKVLQLPNVKLFNATCVEDLVTRP 177 (326)
T ss_dssp HHHHHHHHHHHHHTSTTEEEETTEEEEEEEECC
T ss_pred hHHHHHHHHHHHHHhcCcEEEecceeeeeeecc
Confidence 566777777777764 88999999999998763
No 151
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.85 E-value=5e-09 Score=103.52 Aligned_cols=40 Identities=30% Similarity=0.487 Sum_probs=32.2
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCccc
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLW 60 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~ 60 (423)
|++|||||||++||+||..|+++|++|+|+|+++.+||..
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~ 40 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRA 40 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcE
Confidence 6799999999999999999999999999999999998843
No 152
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.85 E-value=3.2e-08 Score=97.70 Aligned_cols=65 Identities=20% Similarity=0.225 Sum_probs=50.4
Q ss_pred CHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCC
Q 014522 93 TKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAE 161 (423)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~ 161 (423)
....+...+.+.+.+.|+.++.+++|+++..++ +.|.|.+.+..+ +....+++|.||+|+|.++.
T Consensus 147 ~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~--~~~~V~~~d~~~--G~~~~i~A~~VV~AtG~~s~ 211 (501)
T 2qcu_A 147 DDARLVLANAQMVVRKGGEVLTRTRATSARREN--GLWIVEAEDIDT--GKKYSWQARGLVNATGPWVK 211 (501)
T ss_dssp CHHHHHHHHHHHHHHTTCEEECSEEEEEEEEET--TEEEEEEEETTT--CCEEEEEESCEEECCGGGHH
T ss_pred cHHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeC--CEEEEEEEECCC--CCEEEEECCEEEECCChhHH
Confidence 467788888888888999999999999998876 677787743111 12247999999999998754
No 153
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.82 E-value=8.2e-09 Score=102.28 Aligned_cols=62 Identities=23% Similarity=0.132 Sum_probs=48.8
Q ss_pred CCHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCC
Q 014522 92 PTKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAE 161 (423)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~ 161 (423)
..+..+...+.+.+.+.|++++.+ +|+++..+++...+.|++.+ | .++++|.||.|+|.++.
T Consensus 170 ~~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~------g-~~~~ad~vV~A~G~~S~ 231 (511)
T 2weu_A 170 FDADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQ------H-GEISGDLFVDCTGFRGL 231 (511)
T ss_dssp ECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESS------S-CEEECSEEEECCGGGCC
T ss_pred EcHHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECC------C-CEEEcCEEEECCCcchH
Confidence 478889999999999999999999 89999875432335566654 4 47999999999997554
No 154
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.81 E-value=1.5e-08 Score=97.85 Aligned_cols=40 Identities=30% Similarity=0.424 Sum_probs=36.7
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccc
Q 014522 22 NGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQ 61 (423)
Q Consensus 22 ~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~ 61 (423)
+||+|||||++|+++|..|+++|.+|+|+|+.+.+||...
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~ 40 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFT 40 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCcee
Confidence 4899999999999999999999999999999988887543
No 155
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.80 E-value=7.6e-09 Score=103.14 Aligned_cols=61 Identities=11% Similarity=0.120 Sum_probs=47.5
Q ss_pred CHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCC
Q 014522 93 TKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAE 161 (423)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~ 161 (423)
.+..+..++.+.+.+.++.++.+ +|+++...++...+.|.+.+ + .++++|+||+|+|.++.
T Consensus 163 ~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~------g-~~i~ad~vV~A~G~~s~ 223 (538)
T 2aqj_A 163 DAHLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKE------G-RTLEADLFIDCSGMRGL 223 (538)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETT------S-CEECCSEEEECCGGGCC
T ss_pred eHHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECC------C-cEEEeCEEEECCCCchh
Confidence 56888889999998899998888 89999875532334566654 4 47999999999996554
No 156
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.80 E-value=1.9e-08 Score=97.36 Aligned_cols=40 Identities=30% Similarity=0.442 Sum_probs=36.7
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCccc
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLW 60 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~ 60 (423)
++||+|||||++|+++|..|+++|.+|+|+|+.+.+||..
T Consensus 1 ~~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~ 40 (431)
T 3k7m_X 1 MYDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRA 40 (431)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTC
T ss_pred CCCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCee
Confidence 4699999999999999999999999999999988887754
No 157
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.78 E-value=5e-09 Score=100.61 Aligned_cols=130 Identities=16% Similarity=0.129 Sum_probs=77.0
Q ss_pred cCCeEEECCChHHHHHHHHHHHc--CCCEEEEecCCCCCc---------ccccccCCc----ee----------ecC--C
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQ--GVPFVMLERAECIAS---------LWQKRTYDR----LN----------LHL--P 73 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~--g~~v~lie~~~~~gg---------~~~~~~~~~----~~----------~~~--~ 73 (423)
.+||+|||||++|+++|+.|+++ |++|+|||+....++ .|....+.. +. ... .
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~s~~~~g~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 115 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEEGATILAPGVWTAQDIPAGQEAQAEWTREQLLGALGSGKT 115 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTTSHHHHCCCEECGGGCCTTCHHHHHHHHHHHHTGGGSSCC
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcchhccCCcceeecccCCchHHHHHHHHHHHHHHHhCCCCC
Confidence 47999999999999999999999 999999999754332 111111110 00 000 0
Q ss_pred CccccCC------CC-------------CC---------CCC-------CCCCCCHHHHHHHHHHHHHHcCCceeccceE
Q 014522 74 KQFCQLP------KL-------------QF---------PED-------FPEYPTKRQFIQYLESYAEKFEINPRFNECV 118 (423)
Q Consensus 74 ~~~~~~~------~~-------------~~---------~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 118 (423)
..+.... .. .+ +.. .........+...+.+.+.+.+++++.+++|
T Consensus 116 ~~~~~~g~l~~~~~~~~~g~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~v~~~~l~~~L~~~~~~~Gv~i~~~~~v 195 (405)
T 3c4n_A 116 LEVEDRPLLHLLPAGEGSGLTPTLDALADFPEALALLDPARLPVARVDPRALTYRPGSLALLAAQQAIGQGAGLLLNTRA 195 (405)
T ss_dssp CCEEECCEEEEESSCCSSSCEEHHHHTTTCHHHHTTSCTTTSCEEEEETTCEEECHHHHHHHHHHHHHTTTCEEECSCEE
T ss_pred CcEEeeCeEEehhhHhHCCCCCHHHHHHhCCCccccccCCcceEEEEcCCCEEEcHHHHHHHHHHHHHHCCCEEEcCCEE
Confidence 0000000 00 00 000 0111245668888888888889999999999
Q ss_pred E---------EEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCC
Q 014522 119 Q---------SARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENA 160 (423)
Q Consensus 119 ~---------~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~ 160 (423)
+ ++..++ +.+.|.+.+ + .+++|.||+|+|.++
T Consensus 196 ~~~~g~~~~~~i~~~~--~~v~v~~~~------g--~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 196 ELVPGGVRLHRLTVTN--THQIVVHET------R--QIRAGVIIVAAGAAG 236 (405)
T ss_dssp EEETTEEEEECBCC---------CBCC------E--EEEEEEEEECCGGGH
T ss_pred EeccccccccceEeeC--CeEEEEECC------c--EEECCEEEECCCccH
Confidence 8 775544 444444433 3 799999999999765
No 158
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.77 E-value=1.1e-08 Score=98.81 Aligned_cols=41 Identities=32% Similarity=0.521 Sum_probs=37.2
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCccccc
Q 014522 22 NGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQK 62 (423)
Q Consensus 22 ~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~ 62 (423)
+||+|||||++|+++|..|+++|.+|+|+|+.+.+||....
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~ 41 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTN 41 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEE
Confidence 38999999999999999999999999999999988885543
No 159
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.72 E-value=5.1e-08 Score=95.05 Aligned_cols=100 Identities=19% Similarity=0.170 Sum_probs=79.5
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+|+|||||+.|+.+|..|++.|.+|+++++.+.+. + .....+.+.
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l-------------------------------~--~~~~~~~~~ 213 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRIL-------------------------------P--TMDLEVSRA 213 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccc-------------------------------c--ccCHHHHHH
Confidence 4689999999999999999999999999999876321 0 023456677
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcC
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~ 164 (423)
+.+.+++.+++++.+++|++++..+ +.+.+.+.+ + ..+.+|.||+|+| ..|+.
T Consensus 214 l~~~l~~~Gv~i~~~~~V~~i~~~~--~~v~v~~~~------g-~~i~~D~vv~A~G--~~p~~ 266 (455)
T 2yqu_A 214 AERVFKKQGLTIRTGVRVTAVVPEA--KGARVELEG------G-EVLEADRVLVAVG--RRPYT 266 (455)
T ss_dssp HHHHHHHHTCEEECSCCEEEEEEET--TEEEEEETT------S-CEEEESEEEECSC--EEECC
T ss_pred HHHHHHHCCCEEEECCEEEEEEEeC--CEEEEEECC------C-eEEEcCEEEECcC--CCcCC
Confidence 7777788899999999999998765 555566654 4 5799999999999 55554
No 160
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.71 E-value=6.9e-08 Score=96.66 Aligned_cols=66 Identities=9% Similarity=-0.009 Sum_probs=46.7
Q ss_pred CHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCC
Q 014522 93 TKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAE 161 (423)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~ 161 (423)
....+...+...+.+.|+.++.+++|+++..++. ..|.|.+.+..+ ++..+++||.||+|+|.|+.
T Consensus 186 ~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~-~v~gV~~~d~~t--g~~~~i~A~~VV~AaG~ws~ 251 (571)
T 2rgh_A 186 NDARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGD-QIVGVKARDLLT--DEVIEIKAKLVINTSGPWVD 251 (571)
T ss_dssp CHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETT-EEEEEEEEETTT--CCEEEEEBSCEEECCGGGHH
T ss_pred chHHHHHHHHHHHHHcCCeEEeccEEEEEEEeCC-EEEEEEEEEcCC--CCEEEEEcCEEEECCChhHH
Confidence 3455666666777888999999999999988752 335566543211 13247999999999998753
No 161
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.71 E-value=2.6e-08 Score=97.40 Aligned_cols=40 Identities=23% Similarity=0.337 Sum_probs=36.6
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcC------CCEEEEecCCCCCcc
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQG------VPFVMLERAECIASL 59 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g------~~v~lie~~~~~gg~ 59 (423)
+++||+|||||++|+++|..|+++| .+|+|+|+.+.+||.
T Consensus 4 ~~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~ 49 (470)
T 3i6d_A 4 GKKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGK 49 (470)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTT
T ss_pred CCCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCce
Confidence 4679999999999999999999999 999999999888874
No 162
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.70 E-value=2.7e-08 Score=99.40 Aligned_cols=62 Identities=15% Similarity=0.145 Sum_probs=48.7
Q ss_pred CCHHHHHHHHHHHHHHc-CCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCC
Q 014522 92 PTKRQFIQYLESYAEKF-EINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAE 161 (423)
Q Consensus 92 ~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~ 161 (423)
..+..+..++.+.+.+. +++++.+ +|+++...++...+.|.+.+ + .++.+|.||+|+|.++.
T Consensus 191 ~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~------G-~~i~ad~vI~A~G~~S~ 253 (550)
T 2e4g_A 191 FDAHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTAT------G-RVFDADLFVDCSGFRGL 253 (550)
T ss_dssp ECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETT------S-CEEECSEEEECCGGGCC
T ss_pred EcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECC------C-CEEECCEEEECCCCchh
Confidence 46788999999999998 9999999 99999875432334566654 4 57999999999996554
No 163
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.70 E-value=1.7e-07 Score=94.10 Aligned_cols=140 Identities=15% Similarity=0.087 Sum_probs=83.7
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCc-c-ccc-------cc--CCcee---ec---CCCcc------
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIAS-L-WQK-------RT--YDRLN---LH---LPKQF------ 76 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg-~-~~~-------~~--~~~~~---~~---~~~~~------ 76 (423)
..+||||||||++|+++|..|++.|.+|+|+||....+| . +.. .. .+... .+ .....
T Consensus 6 ~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g~s~~a~GGi~~~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v 85 (588)
T 2wdq_A 6 REFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAI 85 (588)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHHH
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCcchhhCCccEEcCCCCCCCCHHHHHHHHHHhcCCCCCHHHH
Confidence 457999999999999999999999999999999865532 1 111 00 00000 00 00000
Q ss_pred -------------ccCCCCCCCCC---------CCC---------C--------CCHHHHHHHHHHHHHHcCCceeccce
Q 014522 77 -------------CQLPKLQFPED---------FPE---------Y--------PTKRQFIQYLESYAEKFEINPRFNEC 117 (423)
Q Consensus 77 -------------~~~~~~~~~~~---------~~~---------~--------~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (423)
..-...++... ... . .+...+...+.+.+.+.+++++.++.
T Consensus 86 ~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~g~~~~~~~~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~ 165 (588)
T 2wdq_A 86 EYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWY 165 (588)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTCSBCCCEECSTTCHHHHHHHHHHHHHHHTTCEEEETEE
T ss_pred HHHHHhHHHHHHHHHHcCCCcccCCCCcEeeeecCCccccccccCcceEEEcCCCCHHHHHHHHHHHHHhCCCEEEeCcE
Confidence 00000111000 000 0 12467788888888888999999999
Q ss_pred EEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCC
Q 014522 118 VQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAE 161 (423)
Q Consensus 118 v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~ 161 (423)
|+++..+++...+-|...+..+ +....+.++.||+|||.++.
T Consensus 166 v~~L~~~~~g~v~Gv~~~~~~~--g~~~~i~A~~VVlAtGg~~~ 207 (588)
T 2wdq_A 166 ALDLVKNQDGAVVGCTALCIET--GEVVYFKARATVLATGGAGR 207 (588)
T ss_dssp EEEEEECTTSCEEEEEEEETTT--CCEEEEEEEEEEECCCCCGG
T ss_pred EEEEEECCCCEEEEEEEEEcCC--CeEEEEEcCEEEECCCCCcc
Confidence 9999875222333344432111 13357999999999997554
No 164
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.69 E-value=5e-08 Score=95.70 Aligned_cols=42 Identities=26% Similarity=0.348 Sum_probs=37.4
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCC--CEEEEecCCCCCcccc
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGV--PFVMLERAECIASLWQ 61 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~--~v~lie~~~~~gg~~~ 61 (423)
|++||+|||||++|+++|+.|+++|. +|+|+|+.+.+||...
T Consensus 1 m~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~ 44 (477)
T 3nks_A 1 MGRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIR 44 (477)
T ss_dssp -CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCC
T ss_pred CCceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceE
Confidence 35799999999999999999999999 9999999988887543
No 165
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.68 E-value=7.5e-08 Score=95.63 Aligned_cols=62 Identities=13% Similarity=0.120 Sum_probs=47.0
Q ss_pred CCHHHHHHHHHHHHHH-cCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCC
Q 014522 92 PTKRQFIQYLESYAEK-FEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAE 161 (423)
Q Consensus 92 ~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~ 161 (423)
..+..+..++.+.+.+ .+++++.+ +|+++..+++.....|.+.+ + .++++|+||.|+|.++.
T Consensus 172 ~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~------g-~~i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 172 LNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQ------N-GEISGQLFIDCTGAKSL 234 (526)
T ss_dssp ECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESS------S-CEEECSEEEECSGGGCC
T ss_pred EcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECC------C-CEEEcCEEEECCCcchH
Confidence 3678889999999998 89999888 59999876432233455544 4 35999999999997554
No 166
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.66 E-value=8.1e-08 Score=100.68 Aligned_cols=58 Identities=19% Similarity=0.090 Sum_probs=47.3
Q ss_pred CHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCe-EEEEEcccCCCCCceEEEEeCEEEEccCCCC
Q 014522 93 TKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGL-WRVKTASSAGSTKTEFEYICRWLVVATGENA 160 (423)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~-~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~ 160 (423)
....+...+.+.+.+.|++++.+++|+++..++ +. +.|.+.+ + +++||.||+|+|.++
T Consensus 149 ~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~--~~v~~V~t~~------G--~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 149 SAARAVQLLIKRTESAGVTYRGSTTVTGIEQSG--GRVTGVQTAD------G--VIPADIVVSCAGFWG 207 (830)
T ss_dssp CHHHHHHHHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEETT------E--EEECSEEEECCGGGH
T ss_pred cHHHHHHHHHHHHHHcCCEEECCceEEEEEEeC--CEEEEEEECC------c--EEECCEEEECCccch
Confidence 566788888888889999999999999998865 44 3466654 4 799999999999765
No 167
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.64 E-value=1.5e-07 Score=89.51 Aligned_cols=100 Identities=14% Similarity=0.116 Sum_probs=80.3
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+.. . .....+.+.
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-------------------------------~-~~~~~~~~~ 192 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMP-------------------------------G-LLHPAAAKA 192 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-------------------------------T-TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhh-------------------------------c-ccCHHHHHH
Confidence 67899999999999999999999999999998764310 0 123556777
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCc
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERV 163 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~ 163 (423)
+.+.+++.+++++.+++|+++...+ +.+.+.+.+ + .++.+|.||+|+| ..|+
T Consensus 193 l~~~l~~~gv~i~~~~~v~~i~~~~--~~~~v~~~~------g-~~i~~d~vv~a~G--~~p~ 244 (384)
T 2v3a_A 193 VQAGLEGLGVRFHLGPVLASLKKAG--EGLEAHLSD------G-EVIPCDLVVSAVG--LRPR 244 (384)
T ss_dssp HHHHHHTTTCEEEESCCEEEEEEET--TEEEEEETT------S-CEEEESEEEECSC--EEEC
T ss_pred HHHHHHHcCCEEEeCCEEEEEEecC--CEEEEEECC------C-CEEECCEEEECcC--CCcC
Confidence 7888888899999999999998765 556677765 5 5899999999999 4444
No 168
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.61 E-value=3.6e-07 Score=91.97 Aligned_cols=138 Identities=17% Similarity=0.134 Sum_probs=83.0
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCc--------cccccc---CCceee---c---CCCcc------
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIAS--------LWQKRT---YDRLNL---H---LPKQF------ 76 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg--------~~~~~~---~~~~~~---~---~~~~~------ 76 (423)
..+||||||||++|+++|..|++.|.+|+|+|+....++ .+.... .+.... + .....
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~ds~~~~~~dtl~~g~~l~d~~~v 96 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEDDNWRWHFYDTVKGSDWLGDQDAI 96 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHHH
T ss_pred ccCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCCCchhhCCCcEecCCCCCCCCHHHHHHHHHHhcCCCCCHHHH
Confidence 467999999999999999999999999999999764332 211100 000000 0 00000
Q ss_pred -------------ccCCCCCCCCC---------CC------------------CCCCHHHHHHHHHHHHHHcCCceeccc
Q 014522 77 -------------CQLPKLQFPED---------FP------------------EYPTKRQFIQYLESYAEKFEINPRFNE 116 (423)
Q Consensus 77 -------------~~~~~~~~~~~---------~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (423)
..-...+|... .. .-.+...+...+.+.+.+.+++++.++
T Consensus 97 ~~l~~~s~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~s~~~g~~~~~~R~~~~~d~tG~~l~~~L~~~~~~~gv~i~~~~ 176 (621)
T 2h88_A 97 HYMTEQAPAAVIELENYGMPFSRTEEGKIYQRAFGGQSLQFGKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEY 176 (621)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTTSCBCCCEECSTTCHHHHHHHHHHHHHTTSCCEEEETE
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCCCceeccccCcccccccCCCcceeEEEecCCCHHHHHHHHHHHHHhCCCEEEEce
Confidence 00001111000 00 001345777888888888899999999
Q ss_pred eEEEEEEeCCCCe-EEEEEcccCCCCCceEEEEeCEEEEccCCCCC
Q 014522 117 CVQSARYDETSGL-WRVKTASSAGSTKTEFEYICRWLVVATGENAE 161 (423)
Q Consensus 117 ~v~~v~~~~~~~~-~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~ 161 (423)
.|+++..++ +. .-|...+..+ +....+.++.||+|||.++.
T Consensus 177 ~v~~Li~~~--g~v~Gv~~~~~~~--G~~~~i~A~~VVlATGG~~~ 218 (621)
T 2h88_A 177 FALDLLMEN--GECRGVIALCIED--GTIHRFRAKNTVIATGGYGR 218 (621)
T ss_dssp EEEEEEEET--TEEEEEEEEETTT--CCEEEEEEEEEEECCCCCGG
T ss_pred EEEEEEEEC--CEEEEEEEEEcCC--CcEEEEEcCeEEECCCcccc
Confidence 999998754 43 2244432111 13357999999999997654
No 169
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.60 E-value=1.1e-07 Score=92.35 Aligned_cols=61 Identities=15% Similarity=0.117 Sum_probs=46.3
Q ss_pred CHHHHHHHHHHHHHHcCCceeccceEEEEEEe--------------CCCCeEEEEEcccCCCCCceEEE--EeCEEEEcc
Q 014522 93 TKRQFIQYLESYAEKFEINPRFNECVQSARYD--------------ETSGLWRVKTASSAGSTKTEFEY--ICRWLVVAT 156 (423)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~--------------~~~~~~~v~~~~~~~~~~~~~~~--~~d~vviAt 156 (423)
....+...+.+.+.+.|++++.+++|+++... ...+.+.|.+.+ + ++ .||.||+|+
T Consensus 179 ~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~------g--~i~~~Ad~VV~At 250 (448)
T 3axb_A 179 DAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSD------G--TRVEVGEKLVVAA 250 (448)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETT------S--CEEEEEEEEEECC
T ss_pred cHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCC------C--EEeecCCEEEECC
Confidence 55678888888888899999999999999872 211234566654 4 57 999999999
Q ss_pred CCCCC
Q 014522 157 GENAE 161 (423)
Q Consensus 157 G~~~~ 161 (423)
|.++.
T Consensus 251 G~~s~ 255 (448)
T 3axb_A 251 GVWSN 255 (448)
T ss_dssp GGGHH
T ss_pred CcCHH
Confidence 97653
No 170
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.59 E-value=4.7e-07 Score=91.05 Aligned_cols=139 Identities=17% Similarity=0.142 Sum_probs=81.8
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcC--CCEEEEecCCCCCc--cccccc----C---Ccee------ecCCCcc------
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQG--VPFVMLERAECIAS--LWQKRT----Y---DRLN------LHLPKQF------ 76 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g--~~v~lie~~~~~gg--~~~~~~----~---~~~~------~~~~~~~------ 76 (423)
..+||||||||++|+++|..|++.| .+|+|+|+....++ .|..+. . +... +......
T Consensus 4 ~~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v 83 (602)
T 1kf6_A 4 FQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVV 83 (602)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCHHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCHHHH
Confidence 4579999999999999999999999 99999999764422 111100 0 0000 0000000
Q ss_pred ----------------ccCCCCCC------CCCCCCC----------CCHHHHHHHHHHHHHHcC-CceeccceEEEEEE
Q 014522 77 ----------------CQLPKLQF------PEDFPEY----------PTKRQFIQYLESYAEKFE-INPRFNECVQSARY 123 (423)
Q Consensus 77 ----------------~~~~~~~~------~~~~~~~----------~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~v~~ 123 (423)
...++... +.....+ .+...+...+.+.+.+.+ ++++.++.|+++..
T Consensus 84 ~~~~~~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~ 163 (602)
T 1kf6_A 84 DYFVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILV 163 (602)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCBCTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEEEETEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEEEeCCEEEEEEE
Confidence 00110000 0000000 124677788888787788 89999999999987
Q ss_pred eCCCCe-EEEEEcccCCCCCceEEEEeCEEEEccCCCCCC
Q 014522 124 DETSGL-WRVKTASSAGSTKTEFEYICRWLVVATGENAER 162 (423)
Q Consensus 124 ~~~~~~-~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~ 162 (423)
++ +. .-+...+..+ +....+.++.||+|||.++..
T Consensus 164 ~~--g~v~Gv~~~~~~~--G~~~~i~A~~VVlAtGg~s~~ 199 (602)
T 1kf6_A 164 DD--GHVRGLVAMNMME--GTLVQIRANAVVMATGGAGRV 199 (602)
T ss_dssp ET--TEEEEEEEEETTT--TEEEEEECSCEEECCCCCGGG
T ss_pred eC--CEEEEEEEEEcCC--CcEEEEEcCeEEECCCCCccc
Confidence 65 42 2233322111 122479999999999976543
No 171
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.57 E-value=1.4e-07 Score=93.73 Aligned_cols=38 Identities=24% Similarity=0.397 Sum_probs=34.0
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCc
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIAS 58 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg 58 (423)
..+||+|||||++|+++|..|++ |.+|+|+|+.+..+|
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g 44 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEG 44 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC-
T ss_pred CCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCC
Confidence 46799999999999999999999 999999999876553
No 172
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.56 E-value=3.8e-07 Score=89.32 Aligned_cols=41 Identities=29% Similarity=0.319 Sum_probs=37.3
Q ss_pred cCCeEEECCChHHHHHHHHHHHcC--CCEEEEecCCCCCcccc
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQG--VPFVMLERAECIASLWQ 61 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g--~~v~lie~~~~~gg~~~ 61 (423)
++||+|||||++|+++|..|++.| .+|+|+|+.+.+||...
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~ 46 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVA 46 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCC
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeE
Confidence 579999999999999999999999 99999999988887543
No 173
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.55 E-value=3.8e-07 Score=89.06 Aligned_cols=105 Identities=19% Similarity=0.214 Sum_probs=81.0
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+++|||||+.|+.+|..|++.|.+|+++|+.+.+. + ....++.+.
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~ 215 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEIL-------------------------------P--QGDPETAAL 215 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------T--TSCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccc-------------------------------c--ccCHHHHHH
Confidence 4689999999999999999999999999999876431 0 123556777
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEc-ccCCCCCceEEEEeCEEEEccCCCCCCcCC
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWRVKTA-SSAGSTKTEFEYICRWLVVATGENAERVMP 165 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~-~~~~~~~~~~~~~~d~vviAtG~~~~~~~p 165 (423)
+.+.+++.+++++.+++|++++... +.+.+++. +..+ ...++.+|.||+|+| ..|+.+
T Consensus 216 l~~~l~~~gV~i~~~~~v~~i~~~~--~~~~v~~~~~~~g---~~~~i~~D~vv~a~G--~~p~~~ 274 (464)
T 2eq6_A 216 LRRALEKEGIRVRTKTKAVGYEKKK--DGLHVRLEPAEGG---EGEEVVVDKVLVAVG--RKPRTE 274 (464)
T ss_dssp HHHHHHHTTCEEECSEEEEEEEEET--TEEEEEEEETTCC---SCEEEEESEEEECSC--EEESCT
T ss_pred HHHHHHhcCCEEEcCCEEEEEEEeC--CEEEEEEeecCCC---ceeEEEcCEEEECCC--cccCCC
Confidence 7888888999999999999998765 55556654 2101 224899999999999 566544
No 174
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.54 E-value=5.2e-07 Score=87.88 Aligned_cols=103 Identities=17% Similarity=0.194 Sum_probs=79.5
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+. + ....++.++
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~ 216 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEIL-------------------------------S--GFEKQMAAI 216 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc-------------------------------c--ccCHHHHHH
Confidence 5789999999999999999999999999999876431 0 023456677
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcC
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~ 164 (423)
+.+.+++.+++++.+++|+++..+. +...+++.+ ++ +..++.+|.||+|+| ..|+.
T Consensus 217 l~~~l~~~gv~i~~~~~v~~i~~~~--~~~~v~~~~-~g---~~~~~~~D~vv~a~G--~~p~~ 272 (455)
T 1ebd_A 217 IKKRLKKKGVEVVTNALAKGAEERE--DGVTVTYEA-NG---ETKTIDADYVLVTVG--RRPNT 272 (455)
T ss_dssp HHHHHHHTTCEEEESEEEEEEEEET--TEEEEEEEE-TT---EEEEEEESEEEECSC--EEESC
T ss_pred HHHHHHHCCCEEEeCCEEEEEEEeC--CeEEEEEEe-CC---ceeEEEcCEEEECcC--CCccc
Confidence 7788888899999999999998765 445555542 11 226899999999999 55554
No 175
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.54 E-value=1.8e-07 Score=90.88 Aligned_cols=102 Identities=22% Similarity=0.249 Sum_probs=78.3
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHH
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQ 99 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (423)
..++++|||+|+.|+.+|..|++.|.+|+++|+.+.+... ....++.+
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~--------------------------------~~~~~~~~ 195 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV--------------------------------YLDKEFTD 195 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT--------------------------------TCCHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccc--------------------------------cCCHHHHH
Confidence 4678999999999999999999999999999997643110 02355677
Q ss_pred HHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCC
Q 014522 100 YLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMP 165 (423)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p 165 (423)
.+.+.+++.+++++.+++|+++..++ ..+.+.++ + .++.+|.||+|+| ..|+.+
T Consensus 196 ~l~~~l~~~gv~i~~~~~v~~i~~~~--~v~~v~~~-------~-~~i~~d~vi~a~G--~~p~~~ 249 (447)
T 1nhp_A 196 VLTEEMEANNITIATGETVERYEGDG--RVQKVVTD-------K-NAYDADLVVVAVG--VRPNTA 249 (447)
T ss_dssp HHHHHHHTTTEEEEESCCEEEEECSS--BCCEEEES-------S-CEEECSEEEECSC--EEESCG
T ss_pred HHHHHHHhCCCEEEcCCEEEEEEccC--cEEEEEEC-------C-CEEECCEEEECcC--CCCChH
Confidence 78888888899999999999987542 33335543 3 4799999999999 555543
No 176
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.53 E-value=1e-06 Score=86.41 Aligned_cols=107 Identities=15% Similarity=0.218 Sum_probs=80.4
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+++|||||+.|+.+|..|++.|.+|+++++.+.+.. ....++.++
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~~~~~~~~ 229 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGA---------------------------------SMDGEVAKA 229 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSS---------------------------------SSCHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcccc---------------------------------ccCHHHHHH
Confidence 57899999999999999999999999999999764321 122556777
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcC
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~ 164 (423)
+.+.+++.+++++.+++|+++...++.+.+.+.+.+..+ ++...+.+|.||+|+| ..|+.
T Consensus 230 l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~--g~~~~~~~D~vv~a~G--~~p~~ 289 (478)
T 1v59_A 230 TQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKT--NKQENLEAEVLLVAVG--RRPYI 289 (478)
T ss_dssp HHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTT--TEEEEEEESEEEECSC--EEECC
T ss_pred HHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCC--CCceEEECCEEEECCC--CCcCC
Confidence 888888899999999999999873112455566542100 1226799999999999 55554
No 177
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.52 E-value=7e-07 Score=90.47 Aligned_cols=64 Identities=9% Similarity=0.102 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCe-EEEEEcccCCCCCceEEEEeCEEEEccCCCCC
Q 014522 94 KRQFIQYLESYAEKFEINPRFNECVQSARYDETSGL-WRVKTASSAGSTKTEFEYICRWLVVATGENAE 161 (423)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~-~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~ 161 (423)
...+...+.+.+.+.+++++.++.|+++..++ +. .-|...+..+ +....+.++.||+|||.++.
T Consensus 157 G~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~--g~v~Gv~~~~~~~--G~~~~i~A~~VVlATGG~~~ 221 (660)
T 2bs2_A 157 GHTMLFAVANECLKLGVSIQDRKEAIALIHQD--GKCYGAVVRDLVT--GDIIAYVAKGTLIATGGYGR 221 (660)
T ss_dssp HHHHHHHHHHHHHHHTCEEECSEEEEEEEEET--TEEEEEEEEETTT--CCEEEEECSEEEECCCCCGG
T ss_pred HHHHHHHHHHHHHhCCCEEEECcEEEEEEecC--CEEEEEEEEECCC--CcEEEEEcCEEEEccCcchh
Confidence 55778888888888899999999999997754 32 2233322111 13356999999999997653
No 178
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.52 E-value=6.2e-07 Score=87.49 Aligned_cols=100 Identities=15% Similarity=0.069 Sum_probs=79.5
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+++|||||..|+.+|..|++.|.+|+++++.+.+. + .....+.+.
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~ 212 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLL-------------------------------F--QFDPLLSAT 212 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------T--TSCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccc-------------------------------c--ccCHHHHHH
Confidence 4689999999999999999999999999999875321 0 012455667
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceE-EEEeCEEEEccCCCCCCcC
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEF-EYICRWLVVATGENAERVM 164 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~-~~~~d~vviAtG~~~~~~~ 164 (423)
+.+.+++.+++++.+++|++++..+ +...+++.+ + . ++.+|.||+|+| ..|+.
T Consensus 213 l~~~l~~~gv~i~~~~~v~~i~~~~--~~~~v~~~~------G-~~~i~~D~vv~a~G--~~p~~ 266 (463)
T 2r9z_A 213 LAENMHAQGIETHLEFAVAALERDA--QGTTLVAQD------G-TRLEGFDSVIWAVG--RAPNT 266 (463)
T ss_dssp HHHHHHHTTCEEESSCCEEEEEEET--TEEEEEETT------C-CEEEEESEEEECSC--EEESC
T ss_pred HHHHHHHCCCEEEeCCEEEEEEEeC--CeEEEEEeC------C-cEEEEcCEEEECCC--CCcCC
Confidence 7777888899999999999998765 445677765 4 4 799999999999 55554
No 179
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.51 E-value=1.6e-08 Score=96.27 Aligned_cols=119 Identities=18% Similarity=0.108 Sum_probs=74.7
Q ss_pred CCeEEECCChHHHHHHHHHHHc--CCCEEEEecCCCC---Ccc--cccccC----------Cc-eeec-C---CCccccC
Q 014522 22 NGPVIVGAGPSGLATAACLRDQ--GVPFVMLERAECI---ASL--WQKRTY----------DR-LNLH-L---PKQFCQL 79 (423)
Q Consensus 22 ~~vvIIGaG~aGl~~A~~L~~~--g~~v~lie~~~~~---gg~--~~~~~~----------~~-~~~~-~---~~~~~~~ 79 (423)
.||+|||||++|+++|..|++. |++|+|+|+.+.+ |.. +..+.. +. +... . ...+..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 79 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVH- 79 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEE-
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEe-
Confidence 3799999999999999999999 9999999998655 210 000000 00 0000 0 000000
Q ss_pred CCCCCCCC--CC-CCCCHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEcc
Q 014522 80 PKLQFPED--FP-EYPTKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVAT 156 (423)
Q Consensus 80 ~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAt 156 (423)
....+... .+ ....+..+.+.+.+.+.+.+++++++++|+++... .++++|.||.|+
T Consensus 80 ~g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~--------------------~~~~ad~vV~Ad 139 (381)
T 3c4a_A 80 HNEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL--------------------PLADYDLVVLAN 139 (381)
T ss_dssp SSSEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC--------------------CGGGCSEEEECC
T ss_pred CCeeEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc--------------------ccccCCEEEECC
Confidence 00000000 00 12478899999999999889999999988655310 125689999999
Q ss_pred CCCCC
Q 014522 157 GENAE 161 (423)
Q Consensus 157 G~~~~ 161 (423)
|.++.
T Consensus 140 G~~S~ 144 (381)
T 3c4a_A 140 GVNHK 144 (381)
T ss_dssp GGGGG
T ss_pred CCCch
Confidence 97665
No 180
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.51 E-value=5.6e-07 Score=87.47 Aligned_cols=102 Identities=15% Similarity=0.113 Sum_probs=80.0
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+++|||||+.|+.+|..|.+.|.+|+++++.+.+. + .....+.+.
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~ 213 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPL-------------------------------P--SFDPMISET 213 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchh-------------------------------h--hhhHHHHHH
Confidence 5689999999999999999999999999999876321 0 022456677
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCC
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMP 165 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p 165 (423)
+.+.+++.+++++.+++|+++...++ +.+.+++.+ + ..+.+|.||+|+| ..|+..
T Consensus 214 l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~~v~~~~------g-~~i~~D~vv~a~G--~~p~~~ 268 (450)
T 1ges_A 214 LVEVMNAEGPQLHTNAIPKAVVKNTD-GSLTLELED------G-RSETVDCLIWAIG--REPAND 268 (450)
T ss_dssp HHHHHHHHSCEEECSCCEEEEEECTT-SCEEEEETT------S-CEEEESEEEECSC--EEESCT
T ss_pred HHHHHHHCCCEEEeCCEEEEEEEeCC-cEEEEEECC------C-cEEEcCEEEECCC--CCcCCC
Confidence 77778888999999999999987542 335577765 5 4899999999999 555543
No 181
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.49 E-value=8.7e-07 Score=87.68 Aligned_cols=100 Identities=13% Similarity=0.065 Sum_probs=81.5
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHH
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQ 99 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (423)
.+.+++|||||+.|+.+|..+++.|.+|+|+++...+. ....++.+
T Consensus 222 lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~----------------------------------~~D~ei~~ 267 (542)
T 4b1b_A 222 DPGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLR----------------------------------GFDQQCAV 267 (542)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSST----------------------------------TSCHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHhcCCeEEEeccccccc----------------------------------ccchhHHH
Confidence 36789999999999999999999999999998754211 13456778
Q ss_pred HHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcC
Q 014522 100 YLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~ 164 (423)
.+....++.++.++.+..++.+...+ +...|.+.+ + ..+.+|.|++|+| -+|+.
T Consensus 268 ~l~~~l~~~gi~~~~~~~v~~~~~~~--~~~~v~~~~------~-~~~~~D~vLvAvG--R~Pnt 321 (542)
T 4b1b_A 268 KVKLYMEEQGVMFKNGILPKKLTKMD--DKILVEFSD------K-TSELYDTVLYAIG--RKGDI 321 (542)
T ss_dssp HHHHHHHHTTCEEEETCCEEEEEEET--TEEEEEETT------S-CEEEESEEEECSC--EEESC
T ss_pred HHHHHHHhhcceeecceEEEEEEecC--CeEEEEEcC------C-CeEEEEEEEEccc--ccCCc
Confidence 88888899999999999999998877 666677665 3 5788999999999 55554
No 182
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.48 E-value=1.3e-06 Score=88.59 Aligned_cols=145 Identities=14% Similarity=0.067 Sum_probs=81.4
Q ss_pred cccCCeEEECCChHHHHHHHHHH---H-cCCCEEEEecCCCCCc-cccccc------C--Cc-ee-ecCCCcc-------
Q 014522 19 IWVNGPVIVGAGPSGLATAACLR---D-QGVPFVMLERAECIAS-LWQKRT------Y--DR-LN-LHLPKQF------- 76 (423)
Q Consensus 19 ~~~~~vvIIGaG~aGl~~A~~L~---~-~g~~v~lie~~~~~gg-~~~~~~------~--~~-~~-~~~~~~~------- 76 (423)
+..+||||||||++|+++|..|+ + .|.+|+|+||....++ .|..+. . .. .. .+.+..+
T Consensus 20 ~~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~~~s~~~a~G~~~~~~~~~~~~~~g~~ds~~~~~~~~~~~ 99 (643)
T 1jnr_A 20 VVETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVERSGAVAQGLSAINTYIDLTGRSERQNTLEDYVRYVTLD 99 (643)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTTTCSTTTTCEEEESCCCCSSSSBSCCCCHHHHHHHHHHH
T ss_pred eccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCCCCCcceecccccccchhhHHHhcCCCCCHHHHHHHHHHH
Confidence 35689999999999999999999 6 8999999999864321 121110 0 00 00 0000000
Q ss_pred -ccC----------------------CCCCCCCCC--CCCC--------CHHHHHHHHHHHHHHc-CC-ceeccceEEEE
Q 014522 77 -CQL----------------------PKLQFPEDF--PEYP--------TKRQFIQYLESYAEKF-EI-NPRFNECVQSA 121 (423)
Q Consensus 77 -~~~----------------------~~~~~~~~~--~~~~--------~~~~~~~~~~~~~~~~-~~-~~~~~~~v~~v 121 (423)
..+ .+.++.... ..++ ....+...+...+.+. ++ +++.++.|+++
T Consensus 100 g~~l~d~~~v~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~~~~~~g~~~~~~l~~~~~~~~gv~~i~~~~~v~~L 179 (643)
T 1jnr_A 100 MMGLAREDLVADYARHVDGTVHLFEKWGLPIWKTPDGKYVREGQWQIMIHGESYKPIIAEAAKMAVGEENIYERVFIFEL 179 (643)
T ss_dssp TTTCCCHHHHHHHHHHHHHHHHHHHHTTCCBCBCTTSCBCBSSSSCEEEEETTHHHHHHHHHHHHHCGGGEECSEEEEEE
T ss_pred hcCcCcHHHHHHHHHHHHHHHHHHHHcCCcceeCCCCCccCCCccccCCCcHHHHHHHHHHHHhcCCCcEEEecCEEEEE
Confidence 000 011111000 0000 1334556666677776 99 89999999999
Q ss_pred EEeCCC--CeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCC
Q 014522 122 RYDETS--GLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMP 165 (423)
Q Consensus 122 ~~~~~~--~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p 165 (423)
..++.. ...-|...+..+ +....+.++.||+|||.++....|
T Consensus 180 ~~~~~~~g~v~Gv~~~~~~~--g~~~~i~A~~VVlAtGG~~~~y~~ 223 (643)
T 1jnr_A 180 LKDNNDPNAVAGAVGFSVRE--PKFYVFKAKAVILATGGATLLFRP 223 (643)
T ss_dssp EECTTCTTBEEEEEEEESSS--SCEEEEECSEEEECCCCBCSSSCC
T ss_pred EEcCCccceeEEEEEEEecC--CcEEEEEcCEEEECCCcccccccC
Confidence 876420 222233221111 133479999999999976654333
No 183
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.48 E-value=9.1e-07 Score=86.46 Aligned_cols=98 Identities=15% Similarity=0.089 Sum_probs=79.0
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. + ....+.+.
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~---~~~~~~~~ 221 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFF-------------------------------R---EDPAIGEA 221 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT-------------------------------T---SCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccC-------------------------------C---CCHHHHHH
Confidence 5689999999999999999999999999999876321 1 22456777
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcC
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~ 164 (423)
+.+.+++.+++++.+++|+++..++ +.+.+.+.+ .++.+|.||+|+| ..|+.
T Consensus 222 l~~~l~~~Gv~i~~~~~v~~i~~~~--~~~~v~~~~--------~~i~aD~Vv~a~G--~~p~~ 273 (467)
T 1zk7_A 222 VTAAFRAEGIEVLEHTQASQVAHMD--GEFVLTTTH--------GELRADKLLVATG--RTPNT 273 (467)
T ss_dssp HHHHHHHTTCEEETTCCEEEEEEET--TEEEEEETT--------EEEEESEEEECSC--EEESC
T ss_pred HHHHHHhCCCEEEcCCEEEEEEEeC--CEEEEEECC--------cEEEcCEEEECCC--CCcCC
Confidence 8888888999999999999998765 555566643 4799999999999 45543
No 184
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.47 E-value=9.1e-07 Score=85.06 Aligned_cols=102 Identities=18% Similarity=0.238 Sum_probs=80.5
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+.. -.....+.++
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~--------------------------------~~~~~~~~~~ 199 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLA--------------------------------RVAGEALSEF 199 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT--------------------------------TTSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhh--------------------------------hhcCHHHHHH
Confidence 57899999999999999999999999999998763310 0134567788
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcC
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~ 164 (423)
+.+.+++.+++++.++.|+.+..++. ....|.+.+ + +.+.+|.||+|+| ..|+.
T Consensus 200 l~~~l~~~GV~i~~~~~v~~i~~~~~-~v~~v~l~d------G-~~i~aD~Vv~a~G--~~p~~ 253 (415)
T 3lxd_A 200 YQAEHRAHGVDLRTGAAMDCIEGDGT-KVTGVRMQD------G-SVIPADIVIVGIG--IVPCV 253 (415)
T ss_dssp HHHHHHHTTCEEEETCCEEEEEESSS-BEEEEEESS------S-CEEECSEEEECSC--CEESC
T ss_pred HHHHHHhCCCEEEECCEEEEEEecCC-cEEEEEeCC------C-CEEEcCEEEECCC--CccCh
Confidence 88888899999999999999987541 222466665 4 5899999999999 55543
No 185
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.45 E-value=5.4e-07 Score=87.80 Aligned_cols=101 Identities=18% Similarity=0.218 Sum_probs=76.4
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+|+|||||+.|+.+|..|++.|.+|+++++.+.+. + ....++.++
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~ 217 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERIL-------------------------------P--TYDSELTAP 217 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSS-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccc-------------------------------c--ccCHHHHHH
Confidence 4689999999999999999999999999999976431 0 123456677
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCC
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMP 165 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p 165 (423)
+.+.+++.+++++.+++|++++. + + ..+...+ ++..++.+|.||+|+| ..|+.+
T Consensus 218 l~~~l~~~gv~i~~~~~v~~i~~-~--~-v~v~~~~-----G~~~~i~~D~vv~a~G--~~p~~~ 271 (458)
T 1lvl_A 218 VAESLKKLGIALHLGHSVEGYEN-G--C-LLANDGK-----GGQLRLEADRVLVAVG--RRPRTK 271 (458)
T ss_dssp HHHHHHHHTCEEETTCEEEEEET-T--E-EEEECSS-----SCCCEECCSCEEECCC--EEECCS
T ss_pred HHHHHHHCCCEEEECCEEEEEEe-C--C-EEEEECC-----CceEEEECCEEEECcC--CCcCCC
Confidence 77777888999999999999875 3 3 3344212 1225799999999999 566544
No 186
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.45 E-value=2.7e-06 Score=83.85 Aligned_cols=100 Identities=14% Similarity=0.112 Sum_probs=79.6
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. + .....+.+.
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~d~~~~~~ 228 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVL-------------------------------P--YEDADAALV 228 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSS-------------------------------C--CSSHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc-------------------------------c--ccCHHHHHH
Confidence 5789999999999999999999999999999876431 0 023456777
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcC
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~ 164 (423)
+.+.+++.|++++.+++|+++..++ +.+.+.+.+ + .++.+|.||+|+| ..|+.
T Consensus 229 l~~~l~~~GV~i~~~~~V~~i~~~~--~~v~v~~~~------g-~~i~aD~Vv~a~G--~~p~~ 281 (499)
T 1xdi_A 229 LEESFAERGVRLFKNARAASVTRTG--AGVLVTMTD------G-RTVEGSHALMTIG--SVPNT 281 (499)
T ss_dssp HHHHHHHTTCEEETTCCEEEEEECS--SSEEEEETT------S-CEEEESEEEECCC--EEECC
T ss_pred HHHHHHHCCCEEEeCCEEEEEEEeC--CEEEEEECC------C-cEEEcCEEEECCC--CCcCC
Confidence 8888888999999999999998765 445565544 4 5799999999999 55544
No 187
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.44 E-value=2.7e-07 Score=91.32 Aligned_cols=44 Identities=25% Similarity=0.425 Sum_probs=40.0
Q ss_pred cccCCeEEECCChHHHHHHHHHHHc-CCCEEEEecCCCCCccccc
Q 014522 19 IWVNGPVIVGAGPSGLATAACLRDQ-GVPFVMLERAECIASLWQK 62 (423)
Q Consensus 19 ~~~~~vvIIGaG~aGl~~A~~L~~~-g~~v~lie~~~~~gg~~~~ 62 (423)
++.+||+|||||++||+||..|+++ |++|+|+|+++.+||..+.
T Consensus 8 ~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~T 52 (513)
T 4gde_A 8 DISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLAST 52 (513)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGCE
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCeee
Confidence 4678999999999999999999985 9999999999999997654
No 188
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.44 E-value=7.7e-08 Score=87.56 Aligned_cols=190 Identities=12% Similarity=0.125 Sum_probs=100.9
Q ss_pred CEEEEECCCCCHHHHHHHHhcc-CCccEEEEecCceeecccccCCChHHHHHHHHhhccHHHHHHHHHHHHHHHhccccc
Q 014522 192 KKVLVVGCGNSGMELSLDLSNH-NASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPLWLVDKILLILAWFILGNTES 270 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~~-g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (423)
.+|+|||+|.+|+.+|..|++. |.+|+++.+.+. +........... ...+... ....++. +
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~-~gg~~~~~~~~~------~~~~~~~---~~~~~l~--------~ 101 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVS-PGGGAWLGGQLF------SAMIVRK---PAHLFLD--------E 101 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSS-CCTTTTCCSTTC------CCEEEET---TTHHHHH--------H
T ss_pred cCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCC-CCCceecCCcch------HHHHcCc---HHHHHHH--------H
Confidence 4799999999999999999997 999999999873 211100000000 0000000 0000000 1
Q ss_pred cCCCCCCCCcccccccCCCccccChhhhhhhhc-CCeEEecC--ceEEe--CC---eEEEc---------cC-----cEe
Q 014522 271 YGLKRPSMGPLALKNTMGKTPVLDIGALKKIRS-GHINVVPG--IKRIS--CG---QAELI---------NG-----EKL 328 (423)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~--i~~~~--~~---~v~~~---------~g-----~~~ 328 (423)
.++.+........ ......+...+.+.+.+ .+++++.+ +.++. .+ ++.+. +| .++
T Consensus 102 ~G~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i 178 (284)
T 1rp0_A 102 IGVAYDEQDTYVV---VKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVM 178 (284)
T ss_dssp HTCCCEECSSEEE---ESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEE
T ss_pred cCCCcccCCCEEE---ecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEE
Confidence 1111111000000 00012223334444544 68999877 56554 23 23442 22 579
Q ss_pred cccEEEEcCCCCCCCCCccccc--------ccccCCCCCCCCC-----CCCCCCCCceEEEeecccc----------CCC
Q 014522 329 DIDAIVLATGYRSNVPSWLQES--------EFFSENGFPKAPF-----PHGWKGNAGLYAVGFTRRG----------LSG 385 (423)
Q Consensus 329 ~~D~vi~a~G~~~~~~~ll~~~--------~~~~~~g~~~~~~-----~~~~~~~~~vya~Gd~~~~----------~~~ 385 (423)
++|.||+|+|..++...+.... ++....|...... ....+..|++|++|++... ...
T Consensus 179 ~ad~VV~AtG~~s~~~~~~~~~~~~~g~~~~v~~~~g~~~~~~~~~~v~~~~~~~p~i~a~G~~~~~~~g~~~~gp~~~~ 258 (284)
T 1rp0_A 179 EAKIVVSSCGHDGPFGATGVKRLKSIGMIDHVPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGA 258 (284)
T ss_dssp EEEEEEECCCSSSTTTTHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHHCEEEETTEEECTHHHHHHHTCEECCSCCHH
T ss_pred ECCEEEECCCCchHHHHHHHHHhhhccCCCCcCCcCCchhhhhhHHHhhccccccCCEEEEeeehhhhcCCCCcChHHHH
Confidence 9999999999888764432211 1111222211100 0223566999999998631 114
Q ss_pred cchhHHHHHHHHhhhhH
Q 014522 386 ASSDAMRIAQDIGKVWK 402 (423)
Q Consensus 386 a~~~g~~~a~~i~~~l~ 402 (423)
+..+|+.+|.+|...|.
T Consensus 259 ~~~sG~~~a~~i~~~l~ 275 (284)
T 1rp0_A 259 MMISGQKAGQLALKALG 275 (284)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred HHHhHHHHHHHHHHHhh
Confidence 66789999999998875
No 189
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.43 E-value=1.2e-06 Score=83.92 Aligned_cols=102 Identities=19% Similarity=0.207 Sum_probs=79.9
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+.. -.....+.++
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~--------------------------------~~~~~~~~~~ 189 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMA--------------------------------RVVTPEISSY 189 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTT--------------------------------TTSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchh--------------------------------hccCHHHHHH
Confidence 56899999999999999999999999999998763210 0123567778
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcC
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~ 164 (423)
+.+.+++.+++++.+++|+++...+. ....|.+.+ + +.+.+|.||+|+| ..|+.
T Consensus 190 l~~~l~~~GV~i~~~~~v~~i~~~~~-~v~~V~~~d------G-~~i~aD~Vv~a~G--~~p~~ 243 (404)
T 3fg2_P 190 FHDRHSGAGIRMHYGVRATEIAAEGD-RVTGVVLSD------G-NTLPCDLVVVGVG--VIPNV 243 (404)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEETT-EEEEEEETT------S-CEEECSEEEECCC--EEECC
T ss_pred HHHHHHhCCcEEEECCEEEEEEecCC-cEEEEEeCC------C-CEEEcCEEEECcC--CccCH
Confidence 88888899999999999999987641 223366665 5 5899999999999 55543
No 190
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.43 E-value=1.2e-06 Score=85.76 Aligned_cols=99 Identities=25% Similarity=0.324 Sum_probs=77.2
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHH
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQ 99 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (423)
...+|+|||||+.|+.+|..|.+.|.+|+++++.+.+.. ....++.+
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~~~~~~~ 231 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT---------------------------------IYDGDMAE 231 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS---------------------------------SSCHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh---------------------------------cCCHHHHH
Confidence 467899999999999999999999999999998753210 02345667
Q ss_pred HHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCc
Q 014522 100 YLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERV 163 (423)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~ 163 (423)
.+.+.+++.+++++.+++|+++..+. +.+.+.+. + .++.+|.||+|+| ..|+
T Consensus 232 ~l~~~l~~~Gv~i~~~~~v~~i~~~~--~v~~v~~~-------~-~~i~~D~vi~a~G--~~p~ 283 (480)
T 3cgb_A 232 YIYKEADKHHIEILTNENVKAFKGNE--RVEAVETD-------K-GTYKADLVLVSVG--VKPN 283 (480)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEESS--BEEEEEET-------T-EEEECSEEEECSC--EEES
T ss_pred HHHHHHHHcCcEEEcCCEEEEEEcCC--cEEEEEEC-------C-CEEEcCEEEECcC--CCcC
Confidence 77888888999999999999998643 33345543 2 4799999999999 4544
No 191
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.43 E-value=1.7e-06 Score=84.16 Aligned_cols=101 Identities=17% Similarity=0.206 Sum_probs=79.7
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+++|||+|..|+.+|..|.+.|.+|+++++.+.+.. . ....++.+.
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~-~~d~~~~~~ 194 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLP-------------------------------K-YFDKEMVAE 194 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-------------------------------T-TCCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcccc-------------------------------c-cCCHHHHHH
Confidence 57899999999999999999999999999998764310 0 023566778
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCC
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMP 165 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p 165 (423)
+.+.+++.+++++.+++|+++...+ +...|.+.+ + ++.+|.||+|+| ..|+..
T Consensus 195 l~~~l~~~GV~i~~~~~v~~i~~~~--~~v~v~~~~------g--~i~aD~Vv~A~G--~~p~~~ 247 (452)
T 3oc4_A 195 VQKSLEKQAVIFHFEETVLGIEETA--NGIVLETSE------Q--EISCDSGIFALN--LHPQLA 247 (452)
T ss_dssp HHHHHHTTTEEEEETCCEEEEEECS--SCEEEEESS------C--EEEESEEEECSC--CBCCCS
T ss_pred HHHHHHHcCCEEEeCCEEEEEEccC--CeEEEEECC------C--EEEeCEEEECcC--CCCChH
Confidence 8888888999999999999998654 444566643 4 799999999999 555543
No 192
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.43 E-value=3.4e-06 Score=82.88 Aligned_cols=104 Identities=18% Similarity=0.190 Sum_probs=78.6
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+|+|||||+.|+.+|..|.+.|.+|+++++.+.+.. ....++.+.
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~d~~~~~~ 220 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVAN---------------------------------LQDEEMKRY 220 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTT---------------------------------CCCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc---------------------------------cCCHHHHHH
Confidence 57899999999999999999999999999999764310 123456666
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCC
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMP 165 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p 165 (423)
+.+..++. ++++.+++|+.+...+ +...+++.+.++ +..++.+|.||+|+| ..|+..
T Consensus 221 l~~~l~~~-V~i~~~~~v~~i~~~~--~~v~v~~~~~~G---~~~~i~~D~Vi~a~G--~~p~~~ 277 (492)
T 3ic9_A 221 AEKTFNEE-FYFDAKARVISTIEKE--DAVEVIYFDKSG---QKTTESFQYVLAATG--RKANVD 277 (492)
T ss_dssp HHHHHHTT-SEEETTCEEEEEEECS--SSEEEEEECTTC---CEEEEEESEEEECSC--CEESCS
T ss_pred HHHHHhhC-cEEEECCEEEEEEEcC--CEEEEEEEeCCC---ceEEEECCEEEEeeC--CccCCC
Confidence 77766666 9999999999998765 455566542111 336899999999999 565543
No 193
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.43 E-value=9.8e-07 Score=84.61 Aligned_cols=96 Identities=23% Similarity=0.323 Sum_probs=76.8
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. . ....++.+.
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~-~~~~~~~~~ 192 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMS-------------------------------R-AAPATLADF 192 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-------------------------------T-TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccc-------------------------------c-ccCHHHHHH
Confidence 57899999999999999999999999999999764310 0 123456677
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCc
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERV 163 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~ 163 (423)
+.+.+++.+++++.+++|++++ + + .|++.+ + ..+.+|.||+|+| ..|+
T Consensus 193 l~~~l~~~GV~i~~~~~v~~i~--~--~--~v~~~~------g-~~i~~D~vi~a~G--~~p~ 240 (408)
T 2gqw_A 193 VARYHAAQGVDLRFERSVTGSV--D--G--VVLLDD------G-TRIAADMVVVGIG--VLAN 240 (408)
T ss_dssp HHHHHHHTTCEEEESCCEEEEE--T--T--EEEETT------S-CEEECSEEEECSC--EEEC
T ss_pred HHHHHHHcCcEEEeCCEEEEEE--C--C--EEEECC------C-CEEEcCEEEECcC--CCcc
Confidence 7888888999999999999987 3 3 377765 5 5899999999999 5554
No 194
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.42 E-value=1.5e-06 Score=85.05 Aligned_cols=107 Identities=17% Similarity=0.231 Sum_probs=79.3
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+++|||||+.|+.+|..|.+.|.+|+++++.+.+... ....++.++
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~--------------------------------~~~~~~~~~ 225 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGV--------------------------------GIDMEISKN 225 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCS--------------------------------SCCHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCc--------------------------------ccCHHHHHH
Confidence 468999999999999999999999999999987643100 123456677
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcC
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~ 164 (423)
+.+.+++.+++++.+++|+++..+.. +...+++.+... ++..++.+|.||+|+| ..|+.
T Consensus 226 l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~~v~~~~~~~--~~~~~i~~D~vv~a~G--~~p~~ 284 (474)
T 1zmd_A 226 FQRILQKQGFKFKLNTKVTGATKKSD-GKIDVSIEAASG--GKAEVITCDVLLVCIG--RRPFT 284 (474)
T ss_dssp HHHHHHHTTCEEECSEEEEEEEECTT-SCEEEEEEETTS--CCCEEEEESEEEECSC--EEECC
T ss_pred HHHHHHHCCCEEEeCceEEEEEEcCC-ceEEEEEEecCC--CCceEEEcCEEEECcC--CCcCC
Confidence 88888889999999999999987652 224555421000 0226899999999999 55554
No 195
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.41 E-value=9.4e-07 Score=89.49 Aligned_cols=37 Identities=14% Similarity=0.128 Sum_probs=33.5
Q ss_pred ccCCeEEECCChHHHHHHHHHHHc------CCCEEEEecCCCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQ------GVPFVMLERAECI 56 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~------g~~v~lie~~~~~ 56 (423)
..+||||||||+||+++|..|++. |.+|+|+||....
T Consensus 21 ~~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~ 63 (662)
T 3gyx_A 21 HSVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLE 63 (662)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTT
T ss_pred EEcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCC
Confidence 468999999999999999999998 9999999997543
No 196
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.41 E-value=1.2e-06 Score=84.73 Aligned_cols=101 Identities=17% Similarity=0.165 Sum_probs=77.8
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. . ....++.++
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~-------------------------------~-~~~~~~~~~ 196 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLE-------------------------------R-VTAPPVSAF 196 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTT-------------------------------T-TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccc-------------------------------c-hhhHHHHHH
Confidence 56899999999999999999999999999998753210 0 123456677
Q ss_pred HHHHHHHcCCceeccceEEEEEE--eCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCc
Q 014522 101 LESYAEKFEINPRFNECVQSARY--DETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERV 163 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~--~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~ 163 (423)
+.+.+++.|++++.+++|+++.. .+ .....|.+.+ + ..+.+|.||+|+| ..|.
T Consensus 197 l~~~l~~~GV~i~~~~~v~~i~~~~~~-~~v~~v~~~~------G-~~i~~D~Vv~a~G--~~p~ 251 (431)
T 1q1r_A 197 YEHLHREAGVDIRTGTQVCGFEMSTDQ-QKVTAVLCED------G-TRLPADLVIAGIG--LIPN 251 (431)
T ss_dssp HHHHHHHHTCEEECSCCEEEEEECTTT-CCEEEEEETT------S-CEEECSEEEECCC--EEEC
T ss_pred HHHHHHhCCeEEEeCCEEEEEEeccCC-CcEEEEEeCC------C-CEEEcCEEEECCC--CCcC
Confidence 77788888999999999999986 32 1333466655 4 5799999999999 4544
No 197
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.41 E-value=1.6e-06 Score=84.97 Aligned_cols=103 Identities=15% Similarity=0.103 Sum_probs=79.3
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+++|||||+.|+.+|..|.+.|.+|+++++.+.+. + ....++.+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~d~~~~~~ 231 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVL-------------------------------R--KFDECIQNT 231 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSC-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccc-------------------------------c--ccCHHHHHH
Confidence 5789999999999999999999999999999876321 0 123456677
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcC
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~ 164 (423)
+.+.+++.+++++.+++|+++...++.....|.+.+ +...+.+|.||+|+| ..|+.
T Consensus 232 l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~------G~~~i~~D~vv~a~G--~~p~~ 287 (479)
T 2hqm_A 232 ITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMND------SKSIDDVDELIWTIG--RKSHL 287 (479)
T ss_dssp HHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETT------SCEEEEESEEEECSC--EEECC
T ss_pred HHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECC------CcEEEEcCEEEECCC--CCCcc
Confidence 777788889999999999999875421134566654 325799999999999 55554
No 198
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.41 E-value=3.3e-07 Score=87.96 Aligned_cols=100 Identities=18% Similarity=0.246 Sum_probs=79.0
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+... .....+.++
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~--------------------------------~~~~~~~~~ 190 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVR--------------------------------VLGRRIGAW 190 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHH--------------------------------HHCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchh--------------------------------hcCHHHHHH
Confidence 578999999999999999999999999999987632100 012456677
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCc
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERV 163 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~ 163 (423)
+.+.+++.+++++.++.|+++..++ ....|++.+ + +.+.+|.||+|+| ..|+
T Consensus 191 l~~~l~~~GV~i~~~~~v~~i~~~~--~~~~v~~~d------g-~~i~aD~Vv~a~G--~~p~ 242 (410)
T 3ef6_A 191 LRGLLTELGVQVELGTGVVGFSGEG--QLEQVMASD------G-RSFVADSALICVG--AEPA 242 (410)
T ss_dssp HHHHHHHHTCEEECSCCEEEEECSS--SCCEEEETT------S-CEEECSEEEECSC--EEEC
T ss_pred HHHHHHHCCCEEEeCCEEEEEeccC--cEEEEEECC------C-CEEEcCEEEEeeC--Ceec
Confidence 7888888899999999999998654 444477765 5 5899999999999 5554
No 199
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.40 E-value=1.9e-06 Score=84.09 Aligned_cols=103 Identities=17% Similarity=0.161 Sum_probs=79.2
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+++|||||+.|+.+|..|.+.|.+|+++++.+.+. + ....++.++
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~ 217 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRAL-------------------------------P--NEDADVSKE 217 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccc-------------------------------c--ccCHHHHHH
Confidence 5689999999999999999999999999999876321 0 123456677
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcC
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~ 164 (423)
+.+..++.+++++.+++|+++.... +...+.+.+ + ++..++.+|.||+|+| ..|+.
T Consensus 218 l~~~l~~~gv~i~~~~~v~~i~~~~--~~~~v~~~~-~---g~~~~~~~D~vv~a~G--~~p~~ 273 (464)
T 2a8x_A 218 IEKQFKKLGVTILTATKVESIADGG--SQVTVTVTK-D---GVAQELKAEKVLQAIG--FAPNV 273 (464)
T ss_dssp HHHHHHHHTCEEECSCEEEEEEECS--SCEEEEEES-S---SCEEEEEESEEEECSC--EEECC
T ss_pred HHHHHHHcCCEEEeCcEEEEEEEcC--CeEEEEEEc-C---CceEEEEcCEEEECCC--CCccC
Confidence 7788888899999999999998755 344455541 1 1236799999999999 55554
No 200
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.40 E-value=1.9e-06 Score=84.87 Aligned_cols=102 Identities=15% Similarity=0.092 Sum_probs=79.5
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+++|||||+.|+.+|..|++.|.+|+++++.+.+. + ....++.+.
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~d~~~~~~ 222 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRIL-------------------------------R--KFDESVINV 222 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSC-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccC-------------------------------c--ccchhhHHH
Confidence 5689999999999999999999999999999876321 0 123456677
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcC
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~ 164 (423)
+.+.+++.+++++.+++|+++...++ +...+.+.+ +...+.+|.||+|+| ..|+.
T Consensus 223 l~~~l~~~gv~i~~~~~v~~i~~~~~-~~~~v~~~~------g~~~~~~D~vi~a~G--~~p~~ 277 (500)
T 1onf_A 223 LENDMKKNNINIVTFADVVEIKKVSD-KNLSIHLSD------GRIYEHFDHVIYCVG--RSPDT 277 (500)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEESST-TCEEEEETT------SCEEEEESEEEECCC--BCCTT
T ss_pred HHHHHHhCCCEEEECCEEEEEEEcCC-ceEEEEECC------CcEEEECCEEEECCC--CCcCC
Confidence 78888889999999999999987542 335577665 422399999999999 55554
No 201
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.39 E-value=1.8e-06 Score=85.51 Aligned_cols=101 Identities=16% Similarity=0.160 Sum_probs=79.7
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHHH
Q 014522 22 NGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQYL 101 (423)
Q Consensus 22 ~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (423)
.+++|||+|..|+.+|..|.+.|.+|+++++.+.+. + ....++.+++
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~l 261 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLK-------------------------------L--IKDNETRAYV 261 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT-------------------------------T--CCSHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccc-------------------------------c--cccHHHHHHH
Confidence 789999999999999999999999999999876321 1 1235667778
Q ss_pred HHHHHHcCCceeccceEEEEEEeCCCCe---EEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcC
Q 014522 102 ESYAEKFEINPRFNECVQSARYDETSGL---WRVKTASSAGSTKTEFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 102 ~~~~~~~~~~~~~~~~v~~v~~~~~~~~---~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~ 164 (423)
.+.+++.|++++.+++|+++...++ +. +.|++.+ +..++.+|.||+|+| ..|+.
T Consensus 262 ~~~l~~~GV~i~~~~~V~~i~~~~~-~~v~~~~v~~~~------G~~~i~aD~Vv~A~G--~~p~~ 318 (523)
T 1mo9_A 262 LDRMKEQGMEIISGSNVTRIEEDAN-GRVQAVVAMTPN------GEMRIETDFVFLGLG--EQPRS 318 (523)
T ss_dssp HHHHHHTTCEEESSCEEEEEEECTT-SBEEEEEEEETT------EEEEEECSCEEECCC--CEECC
T ss_pred HHHHHhCCcEEEECCEEEEEEEcCC-CceEEEEEEECC------CcEEEEcCEEEECcC--CccCC
Confidence 8888889999999999999987542 32 5577655 523899999999999 55543
No 202
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.39 E-value=2.5e-06 Score=83.82 Aligned_cols=106 Identities=17% Similarity=0.172 Sum_probs=81.7
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+|+|||||+.|+.+|..|.+.|.+|+++++.+.+.. ....++.+.
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~d~~~~~~ 244 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILG---------------------------------GMDGEVAKQ 244 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSS---------------------------------SSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccc---------------------------------cCCHHHHHH
Confidence 56899999999999999999999999999998764310 123556677
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCC
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMP 165 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p 165 (423)
+.+.+++.+++++.+++|+++...+ +...+.+.+..+ ++..++.+|.||+|+| ..|+..
T Consensus 245 l~~~l~~~gV~v~~~~~v~~i~~~~--~~~~v~~~~~~~--g~~~~i~~D~Vi~a~G--~~p~~~ 303 (491)
T 3urh_A 245 LQRMLTKQGIDFKLGAKVTGAVKSG--DGAKVTFEPVKG--GEATTLDAEVVLIATG--RKPSTD 303 (491)
T ss_dssp HHHHHHHTTCEEECSEEEEEEEEET--TEEEEEEEETTS--CCCEEEEESEEEECCC--CEECCT
T ss_pred HHHHHHhCCCEEEECCeEEEEEEeC--CEEEEEEEecCC--CceEEEEcCEEEEeeC--CccCCC
Confidence 7888888899999999999998876 555566654221 1236899999999999 555543
No 203
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.39 E-value=2.3e-06 Score=83.64 Aligned_cols=105 Identities=18% Similarity=0.197 Sum_probs=79.6
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+|+|||||+.|+.+|..|.+.|.+|+++++.+.+. + ....++.++
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l-------------------------------~--~~~~~~~~~ 223 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIV-------------------------------P--TMDAEIRKQ 223 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSS-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc-------------------------------c--cccHHHHHH
Confidence 5689999999999999999999999999999876431 0 123466777
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcC
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~ 164 (423)
+.+.+++.+++++.+++|.++..+. +...+.+.+..+ ++...+.+|.||+|+| ..|+.
T Consensus 224 l~~~l~~~gv~i~~~~~v~~i~~~~--~~~~v~~~~~~~--g~~~~~~~D~vv~a~G--~~p~~ 281 (470)
T 1dxl_A 224 FQRSLEKQGMKFKLKTKVVGVDTSG--DGVKLTVEPSAG--GEQTIIEADVVLVSAG--RTPFT 281 (470)
T ss_dssp HHHHHHHSSCCEECSEEEEEEECSS--SSEEEEEEESSS--CCCEEEEESEEECCCC--EEECC
T ss_pred HHHHHHHcCCEEEeCCEEEEEEEcC--CeEEEEEEecCC--CcceEEECCEEEECCC--CCcCC
Confidence 8888888999999999999998654 344455542100 1226899999999999 55544
No 204
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.39 E-value=2.2e-06 Score=83.72 Aligned_cols=104 Identities=15% Similarity=0.164 Sum_probs=78.9
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+++|||||+.|+.+|..|.+.|.+|+++++.+.+. + ....++.+.
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~d~~~~~~ 220 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCA-------------------------------P--TLDEDVTNA 220 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------T--TSCHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccc-------------------------------c--cCCHHHHHH
Confidence 5689999999999999999999999999999876431 0 123456677
Q ss_pred HHHHH-HHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcC
Q 014522 101 LESYA-EKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 101 ~~~~~-~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~ 164 (423)
+.+.+ ++.+++++.+++|+++.... +.+.+.+.+.+ +...++.+|.||+|+| ..|+.
T Consensus 221 l~~~l~~~~gv~i~~~~~v~~i~~~~--~~~~v~~~~~~---g~~~~i~~D~vv~a~G--~~p~~ 278 (468)
T 2qae_A 221 LVGALAKNEKMKFMTSTKVVGGTNNG--DSVSLEVEGKN---GKRETVTCEALLVSVG--RRPFT 278 (468)
T ss_dssp HHHHHHHHTCCEEECSCEEEEEEECS--SSEEEEEECC------EEEEEESEEEECSC--EEECC
T ss_pred HHHHHhhcCCcEEEeCCEEEEEEEcC--CeEEEEEEcCC---CceEEEECCEEEECCC--cccCC
Confidence 77777 88899999999999998765 44556654211 1225799999999999 55554
No 205
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.38 E-value=1.7e-06 Score=84.08 Aligned_cols=102 Identities=16% Similarity=0.102 Sum_probs=77.9
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHH
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQ 99 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (423)
...+++|||+|+.|+.+|..|.+.|.+|+++++.+.+.. -....++.+
T Consensus 148 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--------------------------------~~~~~~~~~ 195 (452)
T 2cdu_A 148 KAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLY--------------------------------KYFDKEFTD 195 (452)
T ss_dssp GCSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTT--------------------------------TTSCHHHHH
T ss_pred cCCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhh--------------------------------hhhhhhHHH
Confidence 357899999999999999999999999999998763210 012345677
Q ss_pred HHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcC
Q 014522 100 YLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~ 164 (423)
.+.+.+++.+++++.+++|+++...+ +.......+ + .++.+|.||+|+| ..|+.
T Consensus 196 ~l~~~l~~~Gv~i~~~~~v~~i~~~~--~~v~~v~~~------g-~~i~~D~vv~a~G--~~p~~ 249 (452)
T 2cdu_A 196 ILAKDYEAHGVNLVLGSKVAAFEEVD--DEIITKTLD------G-KEIKSDIAILCIG--FRPNT 249 (452)
T ss_dssp HHHHHHHHTTCEEEESSCEEEEEEET--TEEEEEETT------S-CEEEESEEEECCC--EEECC
T ss_pred HHHHHHHHCCCEEEcCCeeEEEEcCC--CeEEEEEeC------C-CEEECCEEEECcC--CCCCH
Confidence 78888888999999999999998644 443222223 4 5799999999999 55554
No 206
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.37 E-value=1.6e-06 Score=84.73 Aligned_cols=100 Identities=26% Similarity=0.260 Sum_probs=79.4
Q ss_pred cCCeEEECCChHHHHHHHHHHHc-CCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQ-GVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQ 99 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~-g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (423)
..+++|||+|+.|+.+|..|.+. |.+|+++++.+.+. + ......+.+
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l-------------------------------~-~~~~~~~~~ 206 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIM-------------------------------P-GFTSKSLSQ 206 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSS-------------------------------T-TTSCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCccc-------------------------------c-cccCHHHHH
Confidence 56899999999999999999999 99999999875321 0 012346677
Q ss_pred HHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCc
Q 014522 100 YLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERV 163 (423)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~ 163 (423)
.+.+.+++.+++++.+++|+++...+ +...+.+.+ + +++.+|.||+|+| ..|+
T Consensus 207 ~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v~v~~~~------g-~~i~aD~Vv~a~G--~~p~ 259 (472)
T 3iwa_A 207 MLRHDLEKNDVVVHTGEKVVRLEGEN--GKVARVITD------K-RTLDADLVILAAG--VSPN 259 (472)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEESS--SBEEEEEES------S-CEEECSEEEECSC--EEEC
T ss_pred HHHHHHHhcCCEEEeCCEEEEEEccC--CeEEEEEeC------C-CEEEcCEEEECCC--CCcC
Confidence 78888888999999999999998754 555566655 4 5899999999999 4444
No 207
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.36 E-value=7.1e-07 Score=84.30 Aligned_cols=93 Identities=20% Similarity=0.237 Sum_probs=75.0
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHHH
Q 014522 22 NGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQYL 101 (423)
Q Consensus 22 ~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (423)
.+++|||||+.|+.+|..|++.|.+|+++++.+.+. + ...++.+++
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~---~~~~~~~~l 189 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFL-------------------------------G---LDEELSNMI 189 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCT-------------------------------T---CCHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeec-------------------------------c---CCHHHHHHH
Confidence 689999999999999999999999999999876321 1 224566778
Q ss_pred HHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcC
Q 014522 102 ESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 102 ~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~ 164 (423)
.+..++.+++++.+++|++++ . .. +++.+ + . +.+|.||+|+| ..|+.
T Consensus 190 ~~~l~~~gV~i~~~~~v~~i~--~--~~--v~~~~------g-~-i~~D~vi~a~G--~~p~~ 236 (367)
T 1xhc_A 190 KDMLEETGVKFFLNSELLEAN--E--EG--VLTNS------G-F-IEGKVKICAIG--IVPNV 236 (367)
T ss_dssp HHHHHHTTEEEECSCCEEEEC--S--SE--EEETT------E-E-EECSCEEEECC--EEECC
T ss_pred HHHHHHCCCEEEcCCEEEEEE--e--eE--EEECC------C-E-EEcCEEEECcC--CCcCH
Confidence 888888999999999999886 2 33 66665 5 4 99999999999 55543
No 208
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.35 E-value=2.1e-06 Score=84.30 Aligned_cols=101 Identities=18% Similarity=0.103 Sum_probs=80.0
Q ss_pred cCCeEEECCChHHHHHHHHHHHc---CCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQ---GVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQF 97 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~---g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (423)
..+++|||||+.|+.+|..|.+. |.+|+++++.+.+. + ....++
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l-------------------------------~--~~d~~~ 233 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMIL-------------------------------R--GFDSEL 233 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSS-------------------------------T--TSCHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcc-------------------------------c--ccCHHH
Confidence 46899999999999999999999 99999999976421 0 023456
Q ss_pred HHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcC
Q 014522 98 IQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~ 164 (423)
.+.+.+.+++.+++++.+++|+++...++ +...|++.+ + .++.+|.||+|+| ..|+.
T Consensus 234 ~~~l~~~l~~~GV~i~~~~~v~~i~~~~~-~~~~v~~~~------G-~~i~~D~vv~a~G--~~p~~ 290 (490)
T 1fec_A 234 RKQLTEQLRANGINVRTHENPAKVTKNAD-GTRHVVFES------G-AEADYDVVMLAIG--RVPRS 290 (490)
T ss_dssp HHHHHHHHHHTTEEEEETCCEEEEEECTT-SCEEEEETT------S-CEEEESEEEECSC--EEESC
T ss_pred HHHHHHHHHhCCCEEEeCCEEEEEEEcCC-CEEEEEECC------C-cEEEcCEEEEccC--CCcCc
Confidence 67788888889999999999999987542 345577765 5 4899999999999 55554
No 209
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.34 E-value=2.4e-06 Score=84.04 Aligned_cols=101 Identities=15% Similarity=0.040 Sum_probs=79.7
Q ss_pred cCCeEEECCChHHHHHHHHHHHc---CCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQ---GVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQF 97 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~---g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (423)
..+++|||||+.|+.+|..|.+. |.+|+++++.+.+. + ....++
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l-------------------------------~--~~d~~~ 237 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLIL-------------------------------R--GFDETI 237 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSC-------------------------------T--TSCHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccc-------------------------------c--ccCHHH
Confidence 46899999999999999999999 99999999876321 0 123456
Q ss_pred HHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcC
Q 014522 98 IQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~ 164 (423)
.+.+.+.+++.+++++.+++|+++...++ +...|++.+ + ..+.+|.||+|+| ..|+.
T Consensus 238 ~~~l~~~l~~~GV~i~~~~~v~~i~~~~~-~~~~v~~~~------G-~~i~~D~vv~a~G--~~p~~ 294 (495)
T 2wpf_A 238 REEVTKQLTANGIEIMTNENPAKVSLNTD-GSKHVTFES------G-KTLDVDVVMMAIG--RIPRT 294 (495)
T ss_dssp HHHHHHHHHHTTCEEEESCCEEEEEECTT-SCEEEEETT------S-CEEEESEEEECSC--EEECC
T ss_pred HHHHHHHHHhCCCEEEeCCEEEEEEEcCC-ceEEEEECC------C-cEEEcCEEEECCC--Ccccc
Confidence 67778888889999999999999987542 335577765 5 4899999999999 55554
No 210
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.33 E-value=1.9e-06 Score=88.83 Aligned_cols=39 Identities=36% Similarity=0.607 Sum_probs=36.4
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCc
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIAS 58 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg 58 (423)
..+||+|||||++|+++|..|++.|++|+|+|+.+.+||
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGG 373 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceec
Confidence 367999999999999999999999999999999888877
No 211
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.33 E-value=2.5e-06 Score=83.66 Aligned_cols=100 Identities=21% Similarity=0.213 Sum_probs=80.2
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. + .....+.+.
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l-------------------------------~--~~~~~~~~~ 237 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLIL-------------------------------R--NFDYDLRQL 237 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------T--TSCHHHHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccc-------------------------------c--ccCHHHHHH
Confidence 5689999999999999999999999999999876321 0 123456677
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcC
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~ 164 (423)
+.+.+++.+++++.+++|+++...+ +.+.|.+.+ + .++.+|.||+|+| ..|..
T Consensus 238 l~~~l~~~Gv~i~~~~~V~~i~~~~--~~v~v~~~~------g-~~i~aD~Vi~A~G--~~p~~ 290 (484)
T 3o0h_A 238 LNDAMVAKGISIIYEATVSQVQSTE--NCYNVVLTN------G-QTICADRVMLATG--RVPNT 290 (484)
T ss_dssp HHHHHHHHTCEEESSCCEEEEEECS--SSEEEEETT------S-CEEEESEEEECCC--EEECC
T ss_pred HHHHHHHCCCEEEeCCEEEEEEeeC--CEEEEEECC------C-cEEEcCEEEEeeC--CCcCC
Confidence 7777888899999999999998765 556677765 5 5899999999999 55544
No 212
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.33 E-value=3.7e-06 Score=82.02 Aligned_cols=132 Identities=15% Similarity=0.054 Sum_probs=74.5
Q ss_pred cCCeEEECCChHHHHHHHHHHHc--CCCEEEEecCCCCCcccccccCCceee--cCCCc---cccCCCC--------CCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQ--GVPFVMLERAECIASLWQKRTYDRLNL--HLPKQ---FCQLPKL--------QFP 85 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~--g~~v~lie~~~~~gg~~~~~~~~~~~~--~~~~~---~~~~~~~--------~~~ 85 (423)
.++|+|||||..|+.+|..|.+. +.+|+++++.+.+-. .....+.. ..+.. +..++.. ...
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p----~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~ 302 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKP----ADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHN 302 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCB----CCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGG
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcC----ccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhc
Confidence 56899999999999999999999 889999998764310 00000000 00000 0000000 000
Q ss_pred CCCCCCCCHHHHHHHHHH-----HHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCC
Q 014522 86 EDFPEYPTKRQFIQYLES-----YAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENA 160 (423)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~ 160 (423)
..+.. .....+.+.... .....++.++.+++|+++...+ +.+.+++.+..+ +...++.+|.||+||| .
T Consensus 303 ~~~~~-~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~--~~~~v~~~~~~~--g~~~~~~~D~Vv~AtG--~ 375 (463)
T 3s5w_A 303 TNYSV-VDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATA--QGIELALRDAGS--GELSVETYDAVILATG--Y 375 (463)
T ss_dssp GTSSC-BCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEET--TEEEEEEEETTT--CCEEEEEESEEEECCC--E
T ss_pred cCCCc-CCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecC--CEEEEEEEEcCC--CCeEEEECCEEEEeeC--C
Confidence 00000 011111111111 1112588899999999998876 778788774321 1335799999999999 5
Q ss_pred CCc
Q 014522 161 ERV 163 (423)
Q Consensus 161 ~~~ 163 (423)
.|.
T Consensus 376 ~p~ 378 (463)
T 3s5w_A 376 ERQ 378 (463)
T ss_dssp ECC
T ss_pred CCC
Confidence 554
No 213
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.33 E-value=1.5e-06 Score=85.36 Aligned_cols=101 Identities=19% Similarity=0.259 Sum_probs=76.9
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHH
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQ 99 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (423)
...+|+|||||+.|+.+|..|++.|.+|+++++.+.+.. .....++.+
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~--------------------------------~~~~~~~~~ 240 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLA--------------------------------GYYDRDLTD 240 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT--------------------------------TTSCHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhh--------------------------------hHHHHHHHH
Confidence 357899999999999999999999999999998763210 012345667
Q ss_pred HHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcC
Q 014522 100 YLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~ 164 (423)
.+.+.+++.+++++.+++|+++..++ ....+.+ + + .++.+|.||+|+| ..|+.
T Consensus 241 ~l~~~l~~~GV~i~~~~~v~~i~~~~--~v~~v~~-~------g-~~i~~D~Vi~a~G--~~p~~ 293 (490)
T 2bc0_A 241 LMAKNMEEHGIQLAFGETVKEVAGNG--KVEKIIT-D------K-NEYDVDMVILAVG--FRPNT 293 (490)
T ss_dssp HHHHHHHTTTCEEEETCCEEEEECSS--SCCEEEE-S------S-CEEECSEEEECCC--EEECC
T ss_pred HHHHHHHhCCeEEEeCCEEEEEEcCC--cEEEEEE-C------C-cEEECCEEEECCC--CCcCh
Confidence 78888888899999999999997522 2212444 3 3 5799999999999 55554
No 214
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.32 E-value=2.7e-06 Score=85.23 Aligned_cols=101 Identities=19% Similarity=0.306 Sum_probs=78.8
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+|+|||+|..|+.+|..|.+.|.+|+++++.+.+. + .....+.+.
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~ 197 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVM-------------------------------T--PVDREMAGF 197 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSC-------------------------------T--TSCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccc-------------------------------h--hcCHHHHHH
Confidence 4589999999999999999999999999999876321 1 123556777
Q ss_pred HHHHHHHcCCceeccceEEEEEEeC-----------------CCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCc
Q 014522 101 LESYAEKFEINPRFNECVQSARYDE-----------------TSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERV 163 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~-----------------~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~ 163 (423)
+.+.+++.+++++.+++|+++.... ..+...+.+.+ + ..+.+|.||+|+| ..|.
T Consensus 198 l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~------g-~~i~~D~vi~a~G--~~p~ 268 (565)
T 3ntd_A 198 AHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSN------G-ELLETDLLIMAIG--VRPE 268 (565)
T ss_dssp HHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETT------S-CEEEESEEEECSC--EEEC
T ss_pred HHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcC------C-CEEEcCEEEECcC--Cccc
Confidence 7888888999999999999998731 12555566654 4 5899999999999 5554
No 215
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.32 E-value=1.6e-06 Score=83.89 Aligned_cols=96 Identities=21% Similarity=0.215 Sum_probs=74.8
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+++|||||+.|+.+|..+.+.|.+|+++++.+.+... ...++.+.
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~---------------------------------~d~~~~~~ 193 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKL---------------------------------MDADMNQP 193 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTT---------------------------------SCGGGGHH
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeecccccc---------------------------------ccchhHHH
Confidence 568999999999999999999999999999987643210 11234456
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcC
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~ 164 (423)
+.+..++.+++++.+++|++++. .. +++.+ + +.+.+|.|++|+| ..|+.
T Consensus 194 ~~~~l~~~gV~i~~~~~v~~~~~----~~--v~~~~------g-~~~~~D~vl~a~G--~~Pn~ 242 (437)
T 4eqs_A 194 ILDELDKREIPYRLNEEINAING----NE--ITFKS------G-KVEHYDMIIEGVG--THPNS 242 (437)
T ss_dssp HHHHHHHTTCCEEESCCEEEEET----TE--EEETT------S-CEEECSEEEECCC--EEESC
T ss_pred HHHHhhccceEEEeccEEEEecC----Ce--eeecC------C-eEEeeeeEEEEec--eecCc
Confidence 67777888999999999988753 22 67765 4 6899999999999 55543
No 216
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.31 E-value=4.8e-07 Score=88.02 Aligned_cols=44 Identities=9% Similarity=0.114 Sum_probs=40.8
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccc
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKR 63 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~ 63 (423)
..+||+|||||++|+++|..|++.|++|+++|+++.+||.+...
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~ 53 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASV 53 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEE
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccce
Confidence 46899999999999999999999999999999999999987663
No 217
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.31 E-value=3.1e-06 Score=83.20 Aligned_cols=101 Identities=19% Similarity=0.137 Sum_probs=77.3
Q ss_pred cCCeEEECCChHHHHHHHHHHH----cCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRD----QGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQ 96 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~----~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (423)
..+|+|||||+.|+.+|..|.+ .|.+|+++++.+.+.+ . .....
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~------------------------------~--~l~~~ 227 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMG------------------------------K--ILPEY 227 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTT------------------------------T--TSCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccccc------------------------------c--cCCHH
Confidence 5789999999999999999987 4789999987642110 0 11245
Q ss_pred HHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcC
Q 014522 97 FIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~ 164 (423)
+.+++.+.+++.+++++.+++|+++...+ +...|.+.+ + .++.+|.||+|+| ..|+.
T Consensus 228 ~~~~~~~~l~~~GV~v~~~~~V~~i~~~~--~~~~v~l~d------G-~~i~aD~Vv~a~G--~~pn~ 284 (493)
T 1m6i_A 228 LSNWTMEKVRREGVKVMPNAIVQSVGVSS--GKLLIKLKD------G-RKVETDHIVAAVG--LEPNV 284 (493)
T ss_dssp HHHHHHHHHHTTTCEEECSCCEEEEEEET--TEEEEEETT------S-CEEEESEEEECCC--EEECC
T ss_pred HHHHHHHHHHhcCCEEEeCCEEEEEEecC--CeEEEEECC------C-CEEECCEEEECCC--CCccH
Confidence 66777788888899999999999998755 454566665 5 5899999999999 55543
No 218
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.30 E-value=8.6e-07 Score=85.44 Aligned_cols=48 Identities=29% Similarity=0.523 Sum_probs=42.3
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcC-CCEEEEecCCCCCcccccccCCc
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQG-VPFVMLERAECIASLWQKRTYDR 67 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g-~~v~lie~~~~~gg~~~~~~~~~ 67 (423)
+.+||+|||||++|++||..|++.| .+|+|+|+.+.+||.+.....++
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~~~G 53 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPNYHG 53 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCEETT
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccCCCC
Confidence 5679999999999999999999999 89999999999999776644433
No 219
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.29 E-value=5e-06 Score=81.40 Aligned_cols=103 Identities=19% Similarity=0.189 Sum_probs=80.4
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. + ....++.+.
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~ 226 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFL-------------------------------P--AVDEQVAKE 226 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcC-------------------------------c--ccCHHHHHH
Confidence 5689999999999999999999999999999876321 0 123456777
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcC
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~ 164 (423)
+.+.+++.+++++.+++|+++...+ +...+.+.+.+ +...+.+|.||+|+| ..|+.
T Consensus 227 l~~~l~~~Gv~v~~~~~v~~i~~~~--~~~~v~~~~~~----g~~~~~~D~vi~a~G--~~p~~ 282 (476)
T 3lad_A 227 AQKILTKQGLKILLGARVTGTEVKN--KQVTVKFVDAE----GEKSQAFDKLIVAVG--RRPVT 282 (476)
T ss_dssp HHHHHHHTTEEEEETCEEEEEEECS--SCEEEEEESSS----EEEEEEESEEEECSC--EEECC
T ss_pred HHHHHHhCCCEEEECCEEEEEEEcC--CEEEEEEEeCC----CcEEEECCEEEEeeC--CcccC
Confidence 7788888899999999999998765 45556665411 336799999999999 55554
No 220
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.29 E-value=1.7e-06 Score=84.87 Aligned_cols=104 Identities=15% Similarity=0.091 Sum_probs=78.9
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+++|||||+.|+.+|..|++.|.+|+++++.+.+. + ....++.+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~ 231 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLM-------------------------------Q--GADRDLVKV 231 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSS-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccc-------------------------------c--ccCHHHHHH
Confidence 5689999999999999999999999999999876421 0 123456677
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcC
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~ 164 (423)
+.+.+++.+++++.+++|+++.... +...+.+.+..+ +...+.+|.||+|+| ..|+.
T Consensus 232 l~~~l~~~gV~i~~~~~v~~i~~~~--~~~~v~~~~~~~---~g~~~~~D~vv~a~G--~~p~~ 288 (482)
T 1ojt_A 232 WQKQNEYRFDNIMVNTKTVAVEPKE--DGVYVTFEGANA---PKEPQRYDAVLVAAG--RAPNG 288 (482)
T ss_dssp HHHHHGGGEEEEECSCEEEEEEEET--TEEEEEEESSSC---CSSCEEESCEEECCC--EEECG
T ss_pred HHHHHHhcCCEEEECCEEEEEEEcC--CeEEEEEeccCC---CceEEEcCEEEECcC--CCcCC
Confidence 7788888899999999999998765 444566543110 114688999999999 55554
No 221
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.27 E-value=8.9e-06 Score=79.85 Aligned_cols=105 Identities=15% Similarity=0.038 Sum_probs=78.6
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+++|||+|+.|+.+|..|++.|.+|+++++..... ....++.+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l~----------------------------------~~d~~~~~~ 230 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPLR----------------------------------GFDQQMSSL 230 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSST----------------------------------TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCcccc----------------------------------cCCHHHHHH
Confidence 5689999999999999999999999999999853110 123556777
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcC
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~ 164 (423)
+.+.+++.+++++.++.+..+...++ +...+++.+..+ +...++.+|.||+|+| ..|+.
T Consensus 231 l~~~l~~~gv~~~~~~~v~~i~~~~~-~~~~v~~~~~~~--g~~~~~~~D~vi~a~G--~~p~~ 289 (488)
T 3dgz_A 231 VTEHMESHGTQFLKGCVPSHIKKLPT-NQLQVTWEDHAS--GKEDTGTFDTVLWAIG--RVPET 289 (488)
T ss_dssp HHHHHHHTTCEEEETEEEEEEEECTT-SCEEEEEEETTT--TEEEEEEESEEEECSC--EEESC
T ss_pred HHHHHHHCCCEEEeCCEEEEEEEcCC-CcEEEEEEeCCC--CeeEEEECCEEEEccc--CCccc
Confidence 88888889999999999999987432 444465544221 1223689999999999 55544
No 222
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.26 E-value=1.8e-06 Score=81.95 Aligned_cols=108 Identities=19% Similarity=0.261 Sum_probs=72.1
Q ss_pred CCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHhhccHHHHHHHHHHHHHHHhcccc
Q 014522 190 KGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPLWLVDKILLILAWFILGNTE 269 (423)
Q Consensus 190 ~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (423)
+..+|+|||+|..|+.+|..|...+.+|+++.+++.....+. .+...+... ..
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~-------~l~~~l~g~--------------------~~ 60 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRP-------RLNEIIAKN--------------------KS 60 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGG-------GHHHHHHSC--------------------CC
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccC-------hhhHHHcCC--------------------CC
Confidence 456899999999999999999777889999999884221111 111111000 00
Q ss_pred ccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeCC--eEEEccCcEecccEEEEcCCCCCCCC
Q 014522 270 SYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISCG--QAELINGEKLDIDAIVLATGYRSNVP 344 (423)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~--~v~~~~g~~~~~D~vi~a~G~~~~~~ 344 (423)
...+.....+.+++.+|+++.+ +..+..+ .|++++|+++.+|.+|+|||.+|..+
T Consensus 61 --------------------~~~l~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g~~~~yd~lvlAtG~~p~~p 119 (385)
T 3klj_A 61 --------------------IDDILIKKNDWYEKNNIKVITSEFATSIDPNNKLVTLKSGEKIKYEKLIIASGSIANKI 119 (385)
T ss_dssp --------------------GGGTBSSCHHHHHHTTCEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECCC
T ss_pred --------------------HHHccCCCHHHHHHCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEecCCCcCCC
Confidence 0001111233445678998876 7777754 48889999999999999999887753
No 223
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.25 E-value=6.3e-06 Score=80.70 Aligned_cols=107 Identities=16% Similarity=0.033 Sum_probs=80.1
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. + .....+.++
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~d~~~~~~ 233 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVL-------------------------------R--SFDSMISTN 233 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-------------------------------T--TSCHHHHHH
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccc-------------------------------c--ccCHHHHHH
Confidence 5789999999999999999999999999999875321 0 123556777
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCc--eEEEEeCEEEEccCCCCCCcC
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKT--EFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~--~~~~~~d~vviAtG~~~~~~~ 164 (423)
+.+.+++.+++++.+++|+++....+.....+.+.+..+ +. ...+.+|.||+|+| ..|+.
T Consensus 234 ~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~--g~~~g~~~~~D~vi~a~G--~~p~~ 295 (478)
T 3dk9_A 234 CTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGR--LPVMTMIPDVDCLLWAIG--RVPNT 295 (478)
T ss_dssp HHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTS--CCEEEEEEEESEEEECSC--EEESC
T ss_pred HHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCC--CcccceEEEcCEEEEeec--cccCC
Confidence 888888899999999999999876422134466554211 01 16799999999999 55554
No 224
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.24 E-value=8.9e-06 Score=79.74 Aligned_cols=105 Identities=20% Similarity=0.190 Sum_probs=79.1
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+++|||+|+.|+.+|..|++.|.+|+++++..... ....++.+.
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~----------------------------------~~d~~~~~~ 232 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVLR----------------------------------GFDQQMAEL 232 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSST----------------------------------TSCHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCc----------------------------------ccCHHHHHH
Confidence 4679999999999999999999999999998743110 123466777
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcC
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~ 164 (423)
+.+.+++.+++++.++.|+++...++ +...|++.+..+ +....+.+|.||+|+| ..|+.
T Consensus 233 l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~~v~~~~~~~--~~~~~~~~D~vi~a~G--~~p~~ 291 (483)
T 3dgh_A 233 VAASMEERGIPFLRKTVPLSVEKQDD-GKLLVKYKNVET--GEESEDVYDTVLWAIG--RKGLV 291 (483)
T ss_dssp HHHHHHHTTCCEEETEEEEEEEECTT-SCEEEEEEETTT--CCEEEEEESEEEECSC--EEECC
T ss_pred HHHHHHhCCCEEEeCCEEEEEEEcCC-CcEEEEEecCCC--CceeEEEcCEEEECcc--cccCc
Confidence 88888889999999999999987542 334566654221 1235899999999999 55543
No 225
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.24 E-value=1.4e-06 Score=84.03 Aligned_cols=103 Identities=18% Similarity=0.251 Sum_probs=69.9
Q ss_pred CEEEEECCCCCHHHHHHHHhccC--CccEEEEecCceeecccccCCChHHHHHHHHhhccHHHHHHHHHHHHHHHhcccc
Q 014522 192 KKVLVVGCGNSGMELSLDLSNHN--ASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPLWLVDKILLILAWFILGNTE 269 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~~g--~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (423)
|+|+|||+|..|+.+|..|++.+ .+|++|.++++........ . . ..+...
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~-----~---v--------------------~~g~~~ 54 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFP-----H---L--------------------AMGWRK 54 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHH-----H---H--------------------HHTCSC
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHH-----H---H--------------------hcCCCC
Confidence 68999999999999999999875 6799999998433211100 0 0 000000
Q ss_pred ccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC-ceEEeCC--eEEEccCcEecccEEEEcCCCCCC
Q 014522 270 SYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG-IKRISCG--QAELINGEKLDIDAIVLATGYRSN 342 (423)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-i~~~~~~--~v~~~~g~~~~~D~vi~a~G~~~~ 342 (423)
.. .+...+.+.+++.+|+++.+ ++.+..+ .|++++|+++++|.+|+|||.++.
T Consensus 55 ~~--------------------~i~~~~~~~~~~~gv~~i~~~v~~Id~~~~~V~~~~g~~i~YD~LViAtG~~~~ 110 (430)
T 3hyw_A 55 FE--------------------DISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLV 110 (430)
T ss_dssp GG--------------------GSEEESTTTGGGGTEEEECSCEEEEETTTTEEEETTCCEEECSEEEECCCCEEE
T ss_pred HH--------------------HhhhcHHHHHHHCCcEEEEeEEEEEECCCCEEEECCCCEEECCEEEEeCCCCcc
Confidence 00 01111234455678998877 8888754 588999999999999999997653
No 226
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.23 E-value=1.7e-06 Score=76.10 Aligned_cols=174 Identities=19% Similarity=0.181 Sum_probs=100.5
Q ss_pred CEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHhhccHHHHHHHHHHHHHHHhcccccc
Q 014522 192 KKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPLWLVDKILLILAWFILGNTESY 271 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (423)
-+|+|||+|.+|+++|..|++.|.+|+++.+...... .... .. ...+-...+.+.+ . +
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G-~~~~-~~-------~~~~~~~~~~~~~----~-----d---- 61 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVM-MPFL-PP-------KPPFPPGSLLERA----Y-----D---- 61 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTT-CCSS-CC-------CSCCCTTCHHHHH----C-----C----
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCC-cccC-cc-------ccccchhhHHhhh----c-----c----
Confidence 4799999999999999999999999999999742111 0000 00 0000000000000 0 0
Q ss_pred CCCCCCCCcccccccCCCccccChhhhhhhhcC-CeEEecC-ceEEeC--C---eEEEccCcEecccEEEEcCCCCCCCC
Q 014522 272 GLKRPSMGPLALKNTMGKTPVLDIGALKKIRSG-HINVVPG-IKRISC--G---QAELINGEKLDIDAIVLATGYRSNVP 344 (423)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-i~~~~~--~---~v~~~~g~~~~~D~vi~a~G~~~~~~ 344 (423)
..++ ..+.+...+.+.+++. +++++.. ++++.. + ++.+.+|+++++|.||+|+|..++..
T Consensus 62 -----~~g~--------~~~~~~~~l~~~~~~~~gv~i~~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~ 128 (232)
T 2cul_A 62 -----PKDE--------RVWAFHARAKYLLEGLRPLHLFQATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLGAR 128 (232)
T ss_dssp -----TTCC--------CHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSSCE
T ss_pred -----CCCC--------CHHHHHHHHHHHHHcCCCcEEEEeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhhc
Confidence 0000 0123344455666664 8888754 665543 2 36677888999999999999966532
Q ss_pred C-------------------c---ccccccccC---------CCCCCC------------C-CCCCCCCCCceEEEeecc
Q 014522 345 S-------------------W---LQESEFFSE---------NGFPKA------------P-FPHGWKGNAGLYAVGFTR 380 (423)
Q Consensus 345 ~-------------------l---l~~~~~~~~---------~g~~~~------------~-~~~~~~~~~~vya~Gd~~ 380 (423)
. + +...++... .|.|.. + .....|+.|+||++|||+
T Consensus 129 ~~~G~~~~~~g~~g~~~~~~l~~~l~~~g~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~t~~p~iya~G~~a 208 (232)
T 2cul_A 129 LFLGGVVEEAGRLSEASYPDLLEDLSRLGFRFVEREGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLKRLEGLYAVGLCV 208 (232)
T ss_dssp EEETTEEESEEETTEECCSHHHHHHHHTTCCEEEEEEEEC-----CCEEEEEEEECGGGEETTTTEETTSBSEEECGGGT
T ss_pred eecCCccCCCCCCcccchhhhCHHHHhCCCeEEccccccCcCCCCCCccCchhhcccCCCCCccccccccccceeeeecc
Confidence 1 1 111111000 011100 0 001225899999999999
Q ss_pred ccCC---CcchhHHHHHHHHhhhh
Q 014522 381 RGLS---GASSDAMRIAQDIGKVW 401 (423)
Q Consensus 381 ~~~~---~a~~~g~~~a~~i~~~l 401 (423)
... .+..||+.+|.+|...+
T Consensus 209 -~~g~~~~~~~~g~~~a~~i~~~l 231 (232)
T 2cul_A 209 -REGDYARMSEEGKRLAEHLLHEL 231 (232)
T ss_dssp -SCCCHHHHHHHHHHHHHHHHHHC
T ss_pred -cCccHHHHHHHHHHHHHHHHhhc
Confidence 422 67899999999998876
No 227
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.23 E-value=9.4e-06 Score=79.12 Aligned_cols=100 Identities=17% Similarity=0.146 Sum_probs=78.6
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. + .....+.+.
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l-------------------------------~--~~~~~~~~~ 216 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEIL-------------------------------S--RFDQDMRRG 216 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc-------------------------------c--ccCHHHHHH
Confidence 5689999999999999999999999999999876321 0 123456777
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEEEE-EcccCCCCCceEEEEeCEEEEccCCCCCCcC
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWRVK-TASSAGSTKTEFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~-~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~ 164 (423)
+.+.+++.+++++.++.|+++...++ +...|. +.+ + + +.+|.||+|+| ..|+.
T Consensus 217 l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~~v~~~~~------g-~-i~aD~Vv~a~G--~~p~~ 270 (463)
T 4dna_A 217 LHAAMEEKGIRILCEDIIQSVSADAD-GRRVATTMKH------G-E-IVADQVMLALG--RMPNT 270 (463)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEECTT-SCEEEEESSS------C-E-EEESEEEECSC--EEESC
T ss_pred HHHHHHHCCCEEECCCEEEEEEEcCC-CEEEEEEcCC------C-e-EEeCEEEEeeC--cccCC
Confidence 88888889999999999999987642 334466 544 5 4 99999999999 55544
No 228
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.21 E-value=1.5e-05 Score=78.77 Aligned_cols=106 Identities=17% Similarity=0.141 Sum_probs=76.2
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+++|||+|+.|+.+|..|++.|.+|+++++..... ....++.+.
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~l~----------------------------------~~d~~~~~~ 255 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLR----------------------------------GFDQDMANK 255 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSST----------------------------------TSCHHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEecccccc----------------------------------cCCHHHHHH
Confidence 5679999999999999999999999999999742110 123556777
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCC--CCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcC
Q 014522 101 LESYAEKFEINPRFNECVQSARYDET--SGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~--~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~ 164 (423)
+.+..++.+++++.++.++.+..... .+...++....++ +....+.+|.||+|+| ..|+.
T Consensus 256 ~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g--~~~~~~~~D~vi~a~G--~~p~~ 317 (519)
T 3qfa_A 256 IGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNS--EEIIEGEYNTVMLAIG--RDACT 317 (519)
T ss_dssp HHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSS--SCEEEEEESEEEECSC--EEESC
T ss_pred HHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCC--cEEEEEECCEEEEecC--CcccC
Confidence 78888889999999988888765432 1334444432221 0114678999999999 55544
No 229
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.20 E-value=1.1e-06 Score=83.40 Aligned_cols=44 Identities=25% Similarity=0.207 Sum_probs=40.8
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccc
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKR 63 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~ 63 (423)
..+||+|||||++|+++|..|++.|.+|+|+|+.+.+||.+...
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~ 71 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDC 71 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCE
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCcccee
Confidence 46899999999999999999999999999999999999988754
No 230
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.20 E-value=9.6e-07 Score=83.03 Aligned_cols=44 Identities=25% Similarity=0.284 Sum_probs=40.7
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecC-CCCCcccccc
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERA-ECIASLWQKR 63 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~-~~~gg~~~~~ 63 (423)
..+||+|||||++|+++|..|.+.|++|+|+|+. +.+||.|...
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~ 87 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTF 87 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEE
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeee
Confidence 4679999999999999999999999999999999 9999987654
No 231
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.19 E-value=7.3e-06 Score=75.54 Aligned_cols=103 Identities=17% Similarity=0.177 Sum_probs=75.6
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+|+|||+|..|+.+|..|.+.|.+|+++++.+.+. ....+.+.
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-----------------------------------~~~~~~~~ 189 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR-----------------------------------AEKILIKR 189 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC-----------------------------------CCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccc-----------------------------------cCHHHHHH
Confidence 5689999999999999999999999999999865320 12344556
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEccc-C-CCCCceEEEEeCEEEEccCCCCCCcC
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWRVKTASS-A-GSTKTEFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~-~-~~~~~~~~~~~d~vviAtG~~~~~~~ 164 (423)
+.+.+++.+++++.+++|+++..+.. ....|.+.+. + + ....+.+|.||+|+| ..|..
T Consensus 190 l~~~l~~~gv~i~~~~~v~~i~~~~~-~v~~v~~~~~~~~g---~~~~i~~D~vv~a~G--~~p~~ 249 (320)
T 1trb_A 190 LMDKVENGNIILHTNRTLEEVTGDQM-GVTGVRLRDTQNSD---NIESLDVAGLFVAIG--HSPNT 249 (320)
T ss_dssp HHHHHHTSSEEEECSCEEEEEEECSS-SEEEEEEECCTTCC---CCEEEECSEEEECSC--EEESC
T ss_pred HHHhcccCCeEEEcCceeEEEEcCCC-ceEEEEEEeccCCC---ceEEEEcCEEEEEeC--CCCCh
Confidence 66666778999999999999986542 2223554431 1 1 236899999999999 55543
No 232
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.18 E-value=9.7e-06 Score=75.24 Aligned_cols=103 Identities=15% Similarity=0.100 Sum_probs=75.6
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+|+|||+|..|+.+|..|.+.|.+|+++++.+.+. ......+.
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~-----------------------------------~~~~~~~~ 196 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFR-----------------------------------AHEASVKE 196 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCC-----------------------------------SCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccC-----------------------------------ccHHHHHH
Confidence 5689999999999999999999999999999875321 11234556
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcC
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~ 164 (423)
+.+.+++.+++++.+++|..+..++ +...|.+....+ +...++.+|.||+|+| ..|..
T Consensus 197 l~~~l~~~gv~v~~~~~v~~i~~~~--~~~~v~~~~~~~--g~~~~i~~D~vi~a~G--~~p~~ 254 (335)
T 2zbw_A 197 LMKAHEEGRLEVLTPYELRRVEGDE--RVRWAVVFHNQT--QEELALEVDAVLILAG--YITKL 254 (335)
T ss_dssp HHHHHHTTSSEEETTEEEEEEEESS--SEEEEEEEETTT--CCEEEEECSEEEECCC--EEEEC
T ss_pred HHhccccCCeEEecCCcceeEccCC--CeeEEEEEECCC--CceEEEecCEEEEeec--CCCCc
Confidence 6666777799999999999998743 432355542111 1336899999999999 55543
No 233
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.18 E-value=2.4e-06 Score=82.72 Aligned_cols=104 Identities=13% Similarity=0.287 Sum_probs=71.8
Q ss_pred CEEEEECCCCCHHHHHHHHhc---cCCccEEEEecCceeecccccCCChHHHHHHHHhhccHHHHHHHHHHHHHHHhccc
Q 014522 192 KKVLVVGCGNSGMELSLDLSN---HNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPLWLVDKILLILAWFILGNT 268 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~---~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (423)
++|+|||+|..|+.+|..|++ .+.+|+++.+++........ .........
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~--------~~~~~g~~~------------------- 57 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSN--------PWVGVGWKE------------------- 57 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGH--------HHHHHTSSC-------------------
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCc--------cccccCccC-------------------
Confidence 689999999999999999999 78999999999843211100 000000000
Q ss_pred cccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC-ceEEeCC--eEEEccCcEecccEEEEcCCCCCCC
Q 014522 269 ESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG-IKRISCG--QAELINGEKLDIDAIVLATGYRSNV 343 (423)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-i~~~~~~--~v~~~~g~~~~~D~vi~a~G~~~~~ 343 (423)
...+...+.+.+++.+++++.+ +..+..+ .|.+++|+++.+|.+|+|||.+|+.
T Consensus 58 ---------------------~~~~~~~l~~~~~~~gv~~~~~~v~~id~~~~~V~~~~g~~i~~d~lviAtG~~~~~ 114 (437)
T 3sx6_A 58 ---------------------RDDIAFPIRHYVERKGIHFIAQSAEQIDAEAQNITLADGNTVHYDYLMIATGPKLAF 114 (437)
T ss_dssp ---------------------HHHHEEECHHHHHTTTCEEECSCEEEEETTTTEEEETTSCEEECSEEEECCCCEECG
T ss_pred ---------------------HHHHHHHHHHHHHHCCCEEEEeEEEEEEcCCCEEEECCCCEEECCEEEECCCCCcCc
Confidence 0011122344556678888766 7777764 5888899999999999999998874
No 234
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.17 E-value=1e-06 Score=87.28 Aligned_cols=43 Identities=28% Similarity=0.425 Sum_probs=38.9
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcC-CCEEEEecCCCCCccccc
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQG-VPFVMLERAECIASLWQK 62 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g-~~v~lie~~~~~gg~~~~ 62 (423)
+.+||+|||||++||+||..|++.| .+|+|+|+.+.+||.+..
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t 50 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQT 50 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceee
Confidence 4579999999999999999999999 999999999999986533
No 235
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.16 E-value=5.5e-06 Score=83.33 Aligned_cols=98 Identities=18% Similarity=0.350 Sum_probs=77.8
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. + .....+.+.
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~ 233 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVM-------------------------------P--PIDYEMAAY 233 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc-------------------------------c--cCCHHHHHH
Confidence 5689999999999999999999999999999876321 0 123456677
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcC
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~ 164 (423)
+.+.+++.+++++.+++|+.+.... .. |.+.+ + .++.+|.||+|+| ..|..
T Consensus 234 l~~~l~~~GV~i~~~~~v~~i~~~~--~~--v~~~~------g-~~i~~D~Vi~a~G--~~p~~ 284 (588)
T 3ics_A 234 VHEHMKNHDVELVFEDGVDALEENG--AV--VRLKS------G-SVIQTDMLILAIG--VQPES 284 (588)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEGGG--TE--EEETT------S-CEEECSEEEECSC--EEECC
T ss_pred HHHHHHHcCCEEEECCeEEEEecCC--CE--EEECC------C-CEEEcCEEEEccC--CCCCh
Confidence 7888888999999999999987643 33 66665 4 5899999999999 55543
No 236
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.16 E-value=1.6e-06 Score=82.75 Aligned_cols=45 Identities=24% Similarity=0.206 Sum_probs=41.1
Q ss_pred cCCeEEECCChHHHHHHHHHHHc-CCCEEEEecCCCCCcccccccC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQ-GVPFVMLERAECIASLWQKRTY 65 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~-g~~v~lie~~~~~gg~~~~~~~ 65 (423)
.+||+|||||++|+++|..|++. |.+|+|+|+.+.+||.+.....
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~~~ 52 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEAE 52 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEEEC
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeeccc
Confidence 68999999999999999999999 9999999999999998766433
No 237
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.14 E-value=2e-06 Score=84.22 Aligned_cols=44 Identities=32% Similarity=0.365 Sum_probs=38.1
Q ss_pred cccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCccccc
Q 014522 19 IWVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQK 62 (423)
Q Consensus 19 ~~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~ 62 (423)
...+||+|||||++|+++|..|++.|++|+|+|+.+.+||....
T Consensus 14 ~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t 57 (478)
T 2ivd_A 14 TTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGT 57 (478)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCE
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeee
Confidence 45789999999999999999999999999999999999985544
No 238
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.14 E-value=8.3e-06 Score=76.78 Aligned_cols=108 Identities=17% Similarity=0.185 Sum_probs=73.3
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+|+|||+|..|+.+|..|.+.|.+|+++++.+..... . + + +.......+.+.
T Consensus 166 ~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~--------------~----~-------d-~~~~~~~~~~~~ 219 (369)
T 3d1c_A 166 KGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDP--------------D----A-------D-PSVRLSPYTRQR 219 (369)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCEEEEECC------------------------------------CTTSCCHHHHHH
T ss_pred CCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCC--------------C----C-------C-CCccCCHHHHHH
Confidence 457999999999999999999999999999987532100 0 0 0 011122345566
Q ss_pred HHHHHHHcC-CceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcC
Q 014522 101 LESYAEKFE-INPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 101 ~~~~~~~~~-~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~ 164 (423)
+.+..++.+ ++++.+++|..+.... +.+.+++.+ +.....+|.||+|+| ..|..
T Consensus 220 l~~~l~~~g~v~~~~~~~v~~i~~~~--~~~~v~~~~------g~~~~~~d~vi~a~G--~~~~~ 274 (369)
T 3d1c_A 220 LGNVIKQGARIEMNVHYTVKDIDFNN--GQYHISFDS------GQSVHTPHEPILATG--FDATK 274 (369)
T ss_dssp HHHHHHTTCCEEEECSCCEEEEEEET--TEEEEEESS------SCCEEESSCCEECCC--BCGGG
T ss_pred HHHHHhhCCcEEEecCcEEEEEEecC--CceEEEecC------CeEeccCCceEEeec--cCCcc
Confidence 666667776 9999999999997655 555577665 423334699999999 56554
No 239
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.13 E-value=2.6e-06 Score=84.38 Aligned_cols=42 Identities=33% Similarity=0.421 Sum_probs=38.4
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccc
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQ 61 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~ 61 (423)
+.+||+|||||++|++||..|++.|++|+|+|+++.+||...
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~ 44 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTY 44 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcee
Confidence 357999999999999999999999999999999999988653
No 240
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.12 E-value=1.1e-06 Score=84.74 Aligned_cols=40 Identities=28% Similarity=0.334 Sum_probs=31.9
Q ss_pred hccccccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 15 SRRCIWVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 15 ~~~~~~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
++...|++||+|||||++|+++|..|++.|++|+|||+.+
T Consensus 16 ~~~~~m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 16 PRGSHMKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -------CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred cccCcCCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 3444577899999999999999999999999999999875
No 241
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.11 E-value=6e-06 Score=75.13 Aligned_cols=33 Identities=18% Similarity=0.325 Sum_probs=30.9
Q ss_pred CEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 192 KKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
.+++|||+|..|+.+|..|++.|.+|+++.+++
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~ 35 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGE 35 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 479999999999999999999999999999865
No 242
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.11 E-value=8.9e-06 Score=78.94 Aligned_cols=98 Identities=27% Similarity=0.366 Sum_probs=73.3
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+.. . ....++.+.
T Consensus 148 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~-~~~~~~~~~ 195 (449)
T 3kd9_A 148 VENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLR-------------------------------R-SFDKEVTDI 195 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT-------------------------------T-TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccch-------------------------------h-hcCHHHHHH
Confidence 35899999999999999999999999999998763310 0 023456677
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCc
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERV 163 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~ 163 (423)
+.+..++. ++++.++.|..+.... ....+.. + + .++.+|.||+|+| ..|+
T Consensus 196 l~~~l~~~-v~i~~~~~v~~i~~~~--~v~~v~~-~------g-~~i~~D~Vv~a~G--~~p~ 245 (449)
T 3kd9_A 196 LEEKLKKH-VNLRLQEITMKIEGEE--RVEKVVT-D------A-GEYKAELVILATG--IKPN 245 (449)
T ss_dssp HHHHHTTT-SEEEESCCEEEEECSS--SCCEEEE-T------T-EEEECSEEEECSC--EEEC
T ss_pred HHHHHHhC-cEEEeCCeEEEEeccC--cEEEEEe-C------C-CEEECCEEEEeeC--CccC
Confidence 77777777 8999999999887543 2212332 2 3 6899999999999 5554
No 243
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.10 E-value=4e-06 Score=82.16 Aligned_cols=52 Identities=25% Similarity=0.364 Sum_probs=44.0
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcC-CCEEEEecCCCCCcccccc-cCCceeec
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQG-VPFVMLERAECIASLWQKR-TYDRLNLH 71 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g-~~v~lie~~~~~gg~~~~~-~~~~~~~~ 71 (423)
+.+||+|||||++|+++|..|++.| .+|+|+|+.+.+||.|... ...+...+
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~~g~~~~ 61 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDENGFTWD 61 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECTTSCEEE
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecCCCcEEe
Confidence 4689999999999999999999998 7999999999999988762 34444433
No 244
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.10 E-value=2.4e-06 Score=83.08 Aligned_cols=43 Identities=35% Similarity=0.523 Sum_probs=38.9
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCccccc
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQK 62 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~ 62 (423)
..+||+|||||++|++||..|++.|++|+|+|+.+.+||.+..
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~ 46 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWT 46 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceec
Confidence 3579999999999999999999999999999999999886543
No 245
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.08 E-value=6.4e-06 Score=78.90 Aligned_cols=104 Identities=13% Similarity=0.204 Sum_probs=70.7
Q ss_pred CEEEEECCCCCHHHHHHHHhc---cCCccEEEEecCceeecccccCCChHHHHHHHHhhccHHHHHHHHHHHHHHHhccc
Q 014522 192 KKVLVVGCGNSGMELSLDLSN---HNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPLWLVDKILLILAWFILGNT 268 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~---~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (423)
++|+|||+|.+|+.+|..|++ .|.+|+++.+++.........
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~----------------------------------- 46 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALP----------------------------------- 46 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSC-----------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchh-----------------------------------
Confidence 589999999999999999999 789999999998322110000
Q ss_pred cccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC-ceEEeCC--eEEEccCcE----ecccEEEEcCCCCC
Q 014522 269 ESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG-IKRISCG--QAELINGEK----LDIDAIVLATGYRS 341 (423)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-i~~~~~~--~v~~~~g~~----~~~D~vi~a~G~~~ 341 (423)
... ........+...+.+.+++.+++++.+ +..+..+ .|.+.+++. +++|.||+|||..|
T Consensus 47 --------~~~-----~~~~~~~~~~~~~~~~~~~~gv~~~~~~v~~i~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~ 113 (409)
T 3h8l_A 47 --------HVA-----IGVRDVDELKVDLSEALPEKGIQFQEGTVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHL 113 (409)
T ss_dssp --------CCC-----SSCCCCCCEEEEHHHHTGGGTCEEEECEEEEEETTTTEEEEECTTSCEEEEECSEEEECCCCEE
T ss_pred --------hcc-----cCCcCHHHHHHHHHHHHhhCCeEEEEeeEEEEeCCCCEEEEccCCcccceeeCCEEEECCCCCc
Confidence 000 000001122233445556678888877 7777654 577777764 99999999999988
Q ss_pred CC
Q 014522 342 NV 343 (423)
Q Consensus 342 ~~ 343 (423)
+.
T Consensus 114 ~~ 115 (409)
T 3h8l_A 114 AT 115 (409)
T ss_dssp CG
T ss_pred Cc
Confidence 75
No 246
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.07 E-value=3.7e-06 Score=82.73 Aligned_cols=41 Identities=22% Similarity=0.296 Sum_probs=37.8
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCccccc
Q 014522 22 NGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQK 62 (423)
Q Consensus 22 ~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~ 62 (423)
+||+|||||++|+++|..|++.|++|+|+|+.+.+||....
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t 80 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWS 80 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCE
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCccee
Confidence 79999999999999999999999999999999999885443
No 247
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.06 E-value=1.2e-05 Score=75.43 Aligned_cols=102 Identities=20% Similarity=0.200 Sum_probs=73.4
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+|+|||+|..|+.+|..|.+.|.+|+++++.+.+. ....+.+.
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~-----------------------------------~~~~~~~~ 207 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQ-----------------------------------GHGKTAHE 207 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCS-----------------------------------SCSHHHHS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCC-----------------------------------CCHHHHHH
Confidence 4679999999999999999999999999999875321 00123344
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCe-EEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcC
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGL-WRVKTASSAGSTKTEFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~-~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~ 164 (423)
+.+..++.+++++.+++|+.+..++ +. ..|.+...+ +....+.+|.||+|+| ..|..
T Consensus 208 l~~~~~~~gv~i~~~~~v~~i~~~~--~~v~~v~~~~~~---g~~~~i~~D~vi~a~G--~~p~~ 265 (360)
T 3ab1_A 208 VERARANGTIDVYLETEVASIEESN--GVLTRVHLRSSD---GSKWTVEADRLLILIG--FKSNL 265 (360)
T ss_dssp SHHHHHHTSEEEESSEEEEEEEEET--TEEEEEEEEETT---CCEEEEECSEEEECCC--BCCSC
T ss_pred HHHHhhcCceEEEcCcCHHHhccCC--CceEEEEEEecC---CCeEEEeCCEEEECCC--CCCCH
Confidence 5555667789999999999998764 32 134443111 1336899999999999 55543
No 248
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.05 E-value=4.4e-05 Score=76.91 Aligned_cols=105 Identities=20% Similarity=0.222 Sum_probs=73.1
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+|+|||||..|+.+|..|++.|.+|+++++.... + ....++.++
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l--------------------------------~--~~d~~~~~~ 331 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGGDVTVMVRSILL--------------------------------R--GFDQQMAEK 331 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSS--------------------------------T--TSCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCcCc--------------------------------C--cCCHHHHHH
Confidence 468999999999999999999999999999986211 0 022455667
Q ss_pred HHHHHHHcCCceeccceEEEEEEe-----C--CCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcC
Q 014522 101 LESYAEKFEINPRFNECVQSARYD-----E--TSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~-----~--~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~ 164 (423)
+.+..++.+++++.++.++.+... . ..+...+.....++ ....+.+|.||+|+| ..|+.
T Consensus 332 ~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g---~~~~~~~D~vi~a~G--~~p~~ 397 (598)
T 2x8g_A 332 VGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDG---KKFEEEFETVIFAVG--REPQL 397 (598)
T ss_dssp HHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTS---CEEEEEESEEEECSC--EEECG
T ss_pred HHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCC---cEEeccCCEEEEEeC--Ccccc
Confidence 777778889999999888887543 1 11344344321111 223456999999999 55543
No 249
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.05 E-value=2.9e-06 Score=83.35 Aligned_cols=41 Identities=27% Similarity=0.369 Sum_probs=38.3
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCccc
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLW 60 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~ 60 (423)
+.+||+|||||++|+++|..|++.|++|+|+|+.+.+||.+
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~ 50 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRV 50 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCce
Confidence 46799999999999999999999999999999999999854
No 250
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.05 E-value=3.3e-06 Score=83.29 Aligned_cols=45 Identities=24% Similarity=0.307 Sum_probs=40.2
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCccccccc
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRT 64 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~ 64 (423)
+.+||+|||||++|+++|..|++.|++|+|+|+.+.+||.+....
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~ 56 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVS 56 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeec
Confidence 357999999999999999999999999999999999999765543
No 251
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.04 E-value=3.2e-06 Score=79.78 Aligned_cols=42 Identities=21% Similarity=0.254 Sum_probs=38.9
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccc
Q 014522 22 NGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKR 63 (423)
Q Consensus 22 ~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~ 63 (423)
+||+|||||++|+++|..|++.|.+|+|+|+.+.+||.+...
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~ 43 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTE 43 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCEE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEee
Confidence 589999999999999999999999999999999999976654
No 252
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.03 E-value=4.7e-06 Score=79.59 Aligned_cols=105 Identities=21% Similarity=0.237 Sum_probs=69.1
Q ss_pred CCCEEEEECCCCCHHHHHHHHhccC--CccEEEEecCceeecccccCCChHHHHHHHHhhccHHHHHHHHHHHHHHHhcc
Q 014522 190 KGKKVLVVGCGNSGMELSLDLSNHN--ASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPLWLVDKILLILAWFILGN 267 (423)
Q Consensus 190 ~~~~v~ViG~G~~~~e~a~~l~~~g--~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (423)
.+|+|+|||+|..|+.+|..|++.+ .+|++|.+++......... .. .. +.
T Consensus 1 aGKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~-----~v---~~--------------------g~ 52 (401)
T 3vrd_B 1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSN-----EV---IG--------------------GD 52 (401)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHH-----HH---HH--------------------TS
T ss_pred CcCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHH-----HH---hc--------------------CC
Confidence 3789999999999999999998876 4799998887432110000 00 00 00
Q ss_pred ccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC-ceEEeCC--eEEEccCcEecccEEEEcCCCCCCC
Q 014522 268 TESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG-IKRISCG--QAELINGEKLDIDAIVLATGYRSNV 343 (423)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-i~~~~~~--~v~~~~g~~~~~D~vi~a~G~~~~~ 343 (423)
.... .... -.+.+.+.+++++.+ +..+..+ .+.+.+|.++++|.+++|||.+++.
T Consensus 53 ~~~~--------------------~~~~-~~~~~~~~gv~~i~~~v~~id~~~~~v~~~~g~~i~yd~LviAtG~~~~~ 110 (401)
T 3vrd_B 53 RELA--------------------SLRV-GYDGLRAHGIQVVHDSALGIDPDKKLVKTAGGAEFAYDRCVVAPGIDLLY 110 (401)
T ss_dssp SCGG--------------------GGEE-CSHHHHHTTCEEECSCEEEEETTTTEEEETTSCEEECSEEEECCCEEECG
T ss_pred CCHH--------------------HHhh-CHHHHHHCCCEEEEeEEEEEEccCcEEEecccceeecceeeeccCCcccc
Confidence 0000 0000 112234568888877 7888754 4888999999999999999988775
No 253
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.01 E-value=1.4e-05 Score=78.47 Aligned_cols=99 Identities=25% Similarity=0.293 Sum_probs=71.4
Q ss_pred CCeEEECCChHHHHHHHHHHHc--------------CCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCC
Q 014522 22 NGPVIVGAGPSGLATAACLRDQ--------------GVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPED 87 (423)
Q Consensus 22 ~~vvIIGaG~aGl~~A~~L~~~--------------g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (423)
..++|||||+.|+.+|..|++. ..+|+++|..+.+-
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il------------------------------ 267 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVL------------------------------ 267 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSS------------------------------
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccc------------------------------
Confidence 4699999999999999998764 36899999876431
Q ss_pred CCCCCCHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCC
Q 014522 88 FPEYPTKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGE 158 (423)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~ 158 (423)
+ .....+.+++.+..++.|++++.+++|++++.+ ...+.....++. ...+++.+|.||.|+|.
T Consensus 268 -~--~~~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~~----~~~~~~~~~dg~-~~~~~i~ad~viwa~Gv 330 (502)
T 4g6h_A 268 -N--MFEKKLSSYAQSHLENTSIKVHLRTAVAKVEEK----QLLAKTKHEDGK-ITEETIPYGTLIWATGN 330 (502)
T ss_dssp -T--TSCHHHHHHHHHHHHHTTCEEETTEEEEEECSS----EEEEEEECTTSC-EEEEEEECSEEEECCCE
T ss_pred -c--CCCHHHHHHHHHHHHhcceeeecCceEEEEeCC----ceEEEEEecCcc-cceeeeccCEEEEccCC
Confidence 1 124677888888999999999999999988643 221222211110 01257999999999994
No 254
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.01 E-value=1.3e-05 Score=77.39 Aligned_cols=105 Identities=19% Similarity=0.312 Sum_probs=70.9
Q ss_pred CEEEEECCCCCHHHHHHHHhc--cCCccEEEEecCceeecccccCCChHHHHHHHHhhccHHHHHHHHHHHHHHHhcccc
Q 014522 192 KKVLVVGCGNSGMELSLDLSN--HNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPLWLVDKILLILAWFILGNTE 269 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~--~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (423)
++|+|||+|..|+.+|..|++ .+.+|+++.+++..... .. +....... ..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~-~~-------~~~~~~g~--------------------~~ 54 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFT-PA-------FPHLAMGW--------------------RK 54 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECG-GG-------HHHHHHTC--------------------SC
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcC-CC-------cchhccCc--------------------cC
Confidence 689999999999999999999 67899999998842211 00 00000000 00
Q ss_pred ccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC-ceEEeCC--eEEEccCcEecccEEEEcCCCCCCCC
Q 014522 270 SYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG-IKRISCG--QAELINGEKLDIDAIVLATGYRSNVP 344 (423)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-i~~~~~~--~v~~~~g~~~~~D~vi~a~G~~~~~~ 344 (423)
...+...+.+.+++.+++++.+ +..+..+ .+.+++++++.+|.+|+|||.+++.+
T Consensus 55 --------------------~~~~~~~~~~~~~~~gv~~~~~~v~~id~~~~~v~~~~g~~i~~d~liiAtG~~~~~p 112 (430)
T 3h28_A 55 --------------------FEDISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLVFG 112 (430)
T ss_dssp --------------------GGGSEEESTTTGGGGTEEEECSCEEEEETTTTEEEETTCCEEECSEEEECCCCEEECC
T ss_pred --------------------HHHHHHHHHHHHHhcCCEEEEEEEEEEECCCCEEEECCCcEEECCEEEEcCCcccccC
Confidence 0011112334455668888876 7777754 47788898999999999999987753
No 255
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.97 E-value=4.7e-06 Score=79.11 Aligned_cols=45 Identities=22% Similarity=0.268 Sum_probs=40.6
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTY 65 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~ 65 (423)
.+||+|||||++|+++|..|.+.|.+|+|+|+.+.+||.+.....
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~ 47 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDARD 47 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEEEC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCccccccc
Confidence 358999999999999999999999999999999999998866433
No 256
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.94 E-value=4.8e-05 Score=74.14 Aligned_cols=104 Identities=24% Similarity=0.313 Sum_probs=72.6
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. +. ....++.+.
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~-~~d~~~~~~ 219 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRAL-------------------------------IT-LEDQDIVNT 219 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-------------------------------TT-SCCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCC-------------------------------CC-CCCHHHHHH
Confidence 4689999999999999999999999999999876321 00 002344444
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCC
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMP 165 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p 165 (423)
+.+.. .++++.+++|+++...+. +...+.+.+.++ ...++.+|.||+|+| ..|+..
T Consensus 220 l~~~l---~v~i~~~~~v~~i~~~~~-~~v~v~~~~~~G---~~~~i~~D~vi~a~G--~~p~~~ 275 (466)
T 3l8k_A 220 LLSIL---KLNIKFNSPVTEVKKIKD-DEYEVIYSTKDG---SKKSIFTNSVVLAAG--RRPVIP 275 (466)
T ss_dssp HHHHH---CCCEECSCCEEEEEEEET-TEEEEEECCTTS---CCEEEEESCEEECCC--EEECCC
T ss_pred HHhcC---EEEEEECCEEEEEEEcCC-CcEEEEEEecCC---ceEEEEcCEEEECcC--CCcccc
Confidence 44433 388899999999976531 344466652111 235899999999999 555543
No 257
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.94 E-value=9.3e-06 Score=79.35 Aligned_cols=44 Identities=30% Similarity=0.477 Sum_probs=38.9
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCC-CEEEEecCCCCCcccccc
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGV-PFVMLERAECIASLWQKR 63 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~-~v~lie~~~~~gg~~~~~ 63 (423)
..+||+|||||++|+++|..|.+.|. +|+|+|+.+.+||.+...
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~~ 47 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKT 47 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceeec
Confidence 46799999999999999999999998 899999999999977653
No 258
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.93 E-value=9.1e-06 Score=78.47 Aligned_cols=44 Identities=9% Similarity=0.108 Sum_probs=40.5
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccc
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKR 63 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~ 63 (423)
..+||+|||+|++|+++|..|++.|++|+++|+++.+||.+...
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~ 48 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSI 48 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCcccccccc
Confidence 46799999999999999999999999999999999999987653
No 259
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.92 E-value=4.6e-05 Score=70.57 Aligned_cols=100 Identities=18% Similarity=0.181 Sum_probs=70.7
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. ... .+
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~-----------------------------------~~~---~~ 214 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLR-----------------------------------AST---IM 214 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC-----------------------------------SCH---HH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccC-----------------------------------CCH---HH
Confidence 5679999999999999999999999999999876321 011 22
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCc
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERV 163 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~ 163 (423)
...+.+..+++++.++.|+.+..+.. ....|++.+..+ +....+.+|.||+|+| ..|.
T Consensus 215 ~~~l~~~~gv~i~~~~~v~~i~~~~~-~~~~v~~~~~~~--g~~~~i~~D~vi~a~G--~~p~ 272 (338)
T 3itj_A 215 QKRAEKNEKIEILYNTVALEAKGDGK-LLNALRIKNTKK--NEETDLPVSGLFYAIG--HTPA 272 (338)
T ss_dssp HHHHHHCTTEEEECSEEEEEEEESSS-SEEEEEEEETTT--TEEEEEECSEEEECSC--EEEC
T ss_pred HHHHHhcCCeEEeecceeEEEEcccC-cEEEEEEEECCC--CceEEEEeCEEEEEeC--CCCC
Confidence 22333334999999999999987652 232355544211 1336899999999999 5544
No 260
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.90 E-value=3.5e-05 Score=71.14 Aligned_cols=100 Identities=10% Similarity=0.087 Sum_probs=69.8
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+|+|||+|..|+.+|..|.+.|.+|+++++.+.+. .. . .+
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~----------------------------------~~-~---~~ 193 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLR----------------------------------AN-K---VA 193 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC----------------------------------SC-H---HH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCC----------------------------------cc-h---HH
Confidence 4689999999999999999999999999999875321 01 1 12
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcC
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~ 164 (423)
..++.++.+++++.+++|+.+..++ ....|.+.+..+ +...++.+|.||+|+| ..|+.
T Consensus 194 ~~~l~~~~gv~i~~~~~v~~i~~~~--~v~~v~~~~~~~--g~~~~i~~D~vi~a~G--~~p~~ 251 (325)
T 2q7v_A 194 QARAFANPKMKFIWDTAVEEIQGAD--SVSGVKLRNLKT--GEVSELATDGVFIFIG--HVPNT 251 (325)
T ss_dssp HHHHHTCTTEEEECSEEEEEEEESS--SEEEEEEEETTT--CCEEEEECSEEEECSC--EEESC
T ss_pred HHHHHhcCCceEecCCceEEEccCC--cEEEEEEEECCC--CcEEEEEcCEEEEccC--CCCCh
Confidence 2233334589999999999998643 332355542111 1335799999999999 55543
No 261
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.88 E-value=5.4e-05 Score=69.55 Aligned_cols=100 Identities=16% Similarity=0.167 Sum_probs=72.5
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHH
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQ 99 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (423)
...+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. .. . .
T Consensus 153 ~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~----------------------------------~~-~---~ 194 (323)
T 3f8d_A 153 KNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFK----------------------------------AQ-P---I 194 (323)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCC----------------------------------SC-H---H
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCC----------------------------------cC-H---H
Confidence 35789999999999999999999999999999875321 01 1 2
Q ss_pred HHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCc
Q 014522 100 YLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERV 163 (423)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~ 163 (423)
++.++.++.+++++.+++|+.+..++ ....|++.+..+ +....+.+|.||+|+| ..|.
T Consensus 195 ~~~~~~~~~gv~~~~~~~v~~i~~~~--~~~~v~~~~~~~--g~~~~~~~D~vv~a~G--~~p~ 252 (323)
T 3f8d_A 195 YVETVKKKPNVEFVLNSVVKEIKGDK--VVKQVVVENLKT--GEIKELNVNGVFIEIG--FDPP 252 (323)
T ss_dssp HHHHHHTCTTEEEECSEEEEEEEESS--SEEEEEEEETTT--CCEEEEECSEEEECCC--EECC
T ss_pred HHHHHHhCCCcEEEeCCEEEEEeccC--ceeEEEEEECCC--CceEEEEcCEEEEEEC--CCCC
Confidence 33444445589999999999998764 444466554211 1335799999999999 5554
No 262
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.88 E-value=6.1e-05 Score=68.95 Aligned_cols=99 Identities=15% Similarity=0.102 Sum_probs=69.5
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. .. ..
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-----------------------------------~~----~~ 184 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK-----------------------------------AD----QV 184 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC-----------------------------------SC----HH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC-----------------------------------cc----HH
Confidence 5689999999999999999999999999999875320 00 12
Q ss_pred HHHHHHH-cCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCc
Q 014522 101 LESYAEK-FEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERV 163 (423)
Q Consensus 101 ~~~~~~~-~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~ 163 (423)
+.+.+.+ .+++++.+++|+.+..++. ....+.+.+..+ +....+.+|.||+|+| ..|+
T Consensus 185 ~~~~l~~~~gv~v~~~~~v~~i~~~~~-~v~~v~~~~~~~--g~~~~i~~D~vi~a~G--~~p~ 243 (310)
T 1fl2_A 185 LQDKLRSLKNVDIILNAQTTEVKGDGS-KVVGLEYRDRVS--GDIHNIELAGIFVQIG--LLPN 243 (310)
T ss_dssp HHHHHHTCTTEEEESSEEEEEEEESSS-SEEEEEEEETTT--CCEEEEECSEEEECSC--EEES
T ss_pred HHHHHhhCCCeEEecCCceEEEEcCCC-cEEEEEEEECCC--CcEEEEEcCEEEEeeC--CccC
Confidence 2333344 5899999999999986531 222355543111 1335799999999999 5554
No 263
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.87 E-value=4.1e-05 Score=70.17 Aligned_cols=101 Identities=14% Similarity=0.141 Sum_probs=69.7
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. .... .
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-----------------------------------~~~~---~ 184 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR-----------------------------------CAPI---T 184 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC-----------------------------------SCHH---H
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC-----------------------------------CCHH---H
Confidence 5789999999999999999999999999999875321 0011 2
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcC
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~ 164 (423)
...+.++.+++++.++.++.+..++. +...+.+.+..+ +....+.+|.||+|+| ..|..
T Consensus 185 ~~~l~~~~gv~v~~~~~v~~i~~~~~-~v~~v~~~~~~~--g~~~~i~~D~vi~a~G--~~p~~ 243 (311)
T 2q0l_A 185 LEHAKNNDKIEFLTPYVVEEIKGDAS-GVSSLSIKNTAT--NEKRELVVPGFFIFVG--YDVNN 243 (311)
T ss_dssp HHHHHTCTTEEEETTEEEEEEEEETT-EEEEEEEEETTT--CCEEEEECSEEEECSC--EEECC
T ss_pred HHHHhhCCCeEEEeCCEEEEEECCCC-cEeEEEEEecCC--CceEEEecCEEEEEec--CccCh
Confidence 22233346899999999999987631 222355542111 1335799999999999 55543
No 264
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.87 E-value=5.9e-05 Score=69.43 Aligned_cols=98 Identities=16% Similarity=0.045 Sum_probs=69.6
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. ....
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~-----------------------------------~~~~---- 195 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYM-----------------------------------CENA---- 195 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCC-----------------------------------SCHH----
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccC-----------------------------------CCHH----
Confidence 4689999999999999999999999999999865321 0112
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCC-eEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCc
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSG-LWRVKTASSAGSTKTEFEYICRWLVVATGENAERV 163 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~ 163 (423)
+.+.+.+.+++++.+++|+++..++ + ...+.+.+..+ +....+.+|.||+|+| ..|+
T Consensus 196 l~~~l~~~gv~i~~~~~v~~i~~~~--~~v~~v~~~~~~~--g~~~~i~~D~vi~a~G--~~p~ 253 (319)
T 3cty_A 196 YVQEIKKRNIPYIMNAQVTEIVGDG--KKVTGVKYKDRTT--GEEKLIETDGVFIYVG--LIPQ 253 (319)
T ss_dssp HHHHHHHTTCCEECSEEEEEEEESS--SSEEEEEEEETTT--CCEEEECCSEEEECCC--EEEC
T ss_pred HHHHHhcCCcEEEcCCeEEEEecCC--ceEEEEEEEEcCC--CceEEEecCEEEEeeC--CccC
Confidence 2333446799999999999998754 3 22345442111 1335799999999999 5554
No 265
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.85 E-value=6.1e-05 Score=69.53 Aligned_cols=99 Identities=12% Similarity=0.044 Sum_probs=71.4
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+++|||+|..|+.+|..|.+.+.+|+++++.+.+. .....
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~----------------------------------~~~~~---- 195 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFR----------------------------------AHEHS---- 195 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCS----------------------------------SCHHH----
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCC----------------------------------ccHHH----
Confidence 5679999999999999999999999999999875321 01111
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcC
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~ 164 (423)
.+.+++.+++++.+++|..+..++ +...+++.+..+ +....+.+|.||+|+| ..|..
T Consensus 196 -~~~l~~~gv~~~~~~~v~~i~~~~--~~~~v~~~~~~~--g~~~~~~~D~vv~a~G--~~p~~ 252 (332)
T 3lzw_A 196 -VENLHASKVNVLTPFVPAELIGED--KIEQLVLEEVKG--DRKEILEIDDLIVNYG--FVSSL 252 (332)
T ss_dssp -HHHHHHSSCEEETTEEEEEEECSS--SCCEEEEEETTS--CCEEEEECSEEEECCC--EECCC
T ss_pred -HHHHhcCCeEEEeCceeeEEecCC--ceEEEEEEecCC--CceEEEECCEEEEeec--cCCCc
Confidence 122466799999999999998755 333355554211 1346899999999999 55543
No 266
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.84 E-value=9.7e-06 Score=79.80 Aligned_cols=42 Identities=33% Similarity=0.348 Sum_probs=38.6
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccc
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQ 61 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~ 61 (423)
..+||+|||||++|+++|..|++.|.+|+|+|+.+.+||.+.
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~ 73 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVR 73 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcee
Confidence 467999999999999999999999999999999999998653
No 267
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.84 E-value=9.1e-05 Score=67.78 Aligned_cols=100 Identities=14% Similarity=0.108 Sum_probs=71.7
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. .. ..+
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~----------------------------------~~----~~~ 188 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFR----------------------------------AA----PST 188 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCB----------------------------------SC----HHH
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCC----------------------------------CC----HHH
Confidence 5689999999999999999999999999999875321 01 123
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcC
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~ 164 (423)
+.+..++.+++++.+++|.++..+.. ....+++...+ +...++.+|.||+|+| ..|..
T Consensus 189 ~~~~~~~~gv~~~~~~~v~~i~~~~~-~~~~v~~~~~~---g~~~~~~~D~vv~a~G--~~p~~ 246 (315)
T 3r9u_A 189 VEKVKKNEKIELITSASVDEVYGDKM-GVAGVKVKLKD---GSIRDLNVPGIFTFVG--LNVRN 246 (315)
T ss_dssp HHHHHHCTTEEEECSCEEEEEEEETT-EEEEEEEECTT---SCEEEECCSCEEECSC--EEECC
T ss_pred HHHHHhcCCeEEEeCcEEEEEEcCCC-cEEEEEEEcCC---CCeEEeecCeEEEEEc--CCCCc
Confidence 34455677999999999999987651 12224444211 1335899999999999 55543
No 268
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.82 E-value=1.2e-05 Score=77.79 Aligned_cols=43 Identities=16% Similarity=0.172 Sum_probs=39.8
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCccccc
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQK 62 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~ 62 (423)
..+||+|||+|.+|+++|..|++.|.+|+++|+.+.+||.+..
T Consensus 19 ~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s 61 (475)
T 3p1w_A 19 EHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETAS 61 (475)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccc
Confidence 4689999999999999999999999999999999999987655
No 269
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.82 E-value=1.3e-05 Score=75.31 Aligned_cols=35 Identities=29% Similarity=0.403 Sum_probs=32.7
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
+++||+|||||++|+++|+.|+++|.+|+|+|+..
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 35799999999999999999999999999999875
No 270
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.80 E-value=9.4e-05 Score=68.59 Aligned_cols=101 Identities=16% Similarity=0.148 Sum_probs=69.5
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+|+|||+|..|+.+|..|.+.|.+|+++++.+.+. .. .. .
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~----------------------------------~~-~~---~ 196 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFR----------------------------------AS-KI---M 196 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCS----------------------------------SC-TT---H
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCC----------------------------------cc-HH---H
Confidence 5689999999999999999999999999999875321 00 00 1
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcCC
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVMP 165 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~p 165 (423)
..++.++.+++++.+++|+.+..+. +...+.+.+..+ +....+.+|.||+|+| ..|...
T Consensus 197 ~~~~~~~~gV~v~~~~~v~~i~~~~--~~~~v~~~~~~~--g~~~~i~~D~vi~a~G--~~p~~~ 255 (335)
T 2a87_A 197 LDRARNNDKIRFLTNHTVVAVDGDT--TVTGLRVRDTNT--GAETTLPVTGVFVAIG--HEPRSG 255 (335)
T ss_dssp HHHHHHCTTEEEECSEEEEEEECSS--SCCEEEEEEETT--SCCEEECCSCEEECSC--EEECCT
T ss_pred HHHHhccCCcEEEeCceeEEEecCC--cEeEEEEEEcCC--CceEEeecCEEEEccC--CccChh
Confidence 1233345789999999999987654 221244432111 1236899999999999 555543
No 271
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.80 E-value=1.6e-05 Score=81.39 Aligned_cols=101 Identities=14% Similarity=0.043 Sum_probs=71.5
Q ss_pred cCCeEEEC--CChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHH
Q 014522 21 VNGPVIVG--AGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFI 98 (423)
Q Consensus 21 ~~~vvIIG--aG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (423)
..+|+||| +|..|+.+|..|.+.|.+|+++++.+.+.... ......
T Consensus 523 g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~--------------------------------~~~~~~ 570 (690)
T 3k30_A 523 GKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWT--------------------------------NNTFEV 570 (690)
T ss_dssp SSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGG--------------------------------GGGTCH
T ss_pred CCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccccccc--------------------------------ccchhH
Confidence 45699999 99999999999999999999999876432110 001123
Q ss_pred HHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCc
Q 014522 99 QYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERV 163 (423)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~ 163 (423)
..+.+.+++.+++++.+++|+++..+ ...+.... .+ +..++.+|.||+|+| ..|.
T Consensus 571 ~~l~~~l~~~GV~i~~~~~V~~i~~~----~~~v~~~~-~~---~~~~i~aD~VV~A~G--~~p~ 625 (690)
T 3k30_A 571 NRIQRRLIENGVARVTDHAVVAVGAG----GVTVRDTY-AS---IERELECDAVVMVTA--RLPR 625 (690)
T ss_dssp HHHHHHHHHTTCEEEESEEEEEEETT----EEEEEETT-TC---CEEEEECSEEEEESC--EEEC
T ss_pred HHHHHHHHHCCCEEEcCcEEEEEECC----eEEEEEcc-CC---eEEEEECCEEEECCC--CCCC
Confidence 45566667789999999999988632 22233321 11 336899999999999 5544
No 272
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.78 E-value=8.4e-05 Score=68.78 Aligned_cols=102 Identities=17% Similarity=0.189 Sum_probs=70.1
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+|+|||+|..|+.+|..|.+.|.+|+++++.+.+. .... .
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~-----------------------------------~~~~---~ 200 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFR-----------------------------------ASKI---M 200 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCC-----------------------------------SCHH---H
T ss_pred CCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCC-----------------------------------ccHH---H
Confidence 5689999999999999999999999999999875321 0011 1
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeE-EEEEcccCCCCCceEEEEeCEEEEccCCCCCCcC
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLW-RVKTASSAGSTKTEFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~-~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~ 164 (423)
..+..++.+++++.+++|..+..+...... .+.+.+..+ +...++.+|.||+|+| ..|..
T Consensus 201 ~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~--g~~~~i~~D~vi~a~G--~~p~~ 261 (333)
T 1vdc_A 201 QQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVT--GDVSDLKVSGLFFAIG--HEPAT 261 (333)
T ss_dssp HHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTT--CCEEEEECSEEEECSC--EEESC
T ss_pred HHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCC--CceEEEecCEEEEEeC--Cccch
Confidence 123345568999999999999865421021 244432111 1336899999999999 55543
No 273
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.77 E-value=2.5e-05 Score=72.70 Aligned_cols=36 Identities=31% Similarity=0.351 Sum_probs=33.2
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECI 56 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~ 56 (423)
|+||+|||||++|+.+|..|++.|.+|+|+|+.+..
T Consensus 1 m~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~ 36 (443)
T 3g5s_A 1 MERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKR 36 (443)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTS
T ss_pred CCCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCc
Confidence 479999999999999999999999999999987643
No 274
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=97.75 E-value=4.2e-05 Score=71.36 Aligned_cols=33 Identities=24% Similarity=0.327 Sum_probs=31.2
Q ss_pred CEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 192 KKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
.+++|||+|..|+.+|..|++.|.+|+++.+++
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~ 36 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEA 36 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSCCEEEECCSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 479999999999999999999999999999887
No 275
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=97.72 E-value=3.5e-05 Score=73.81 Aligned_cols=135 Identities=13% Similarity=0.243 Sum_probs=74.7
Q ss_pred CCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeeccc-------------------ccCCChHHHHHHHHhhccHH
Q 014522 191 GKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPRE-------------------ILGKSTFELATLMMKWLPLW 251 (423)
Q Consensus 191 ~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~ 251 (423)
..+|+|||+|.+|+.+|..|++.|.+|+++.+.+. +.... ............+.++-+
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~-~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~-- 103 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARA-PGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRP-- 103 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS-SCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCH--
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC-CCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCH--
Confidence 45899999999999999999999999999999873 21100 000000000011111111
Q ss_pred HHHHHHHHHHHHHhccccccCCCCC--CCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeC--Ce--EEEc
Q 014522 252 LVDKILLILAWFILGNTESYGLKRP--SMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISC--GQ--AELI 323 (423)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~--~~--v~~~ 323 (423)
..+..++ .+.++... ..+..+ .......+...+.+.+++.+++++.+ +..+.. ++ |.+.
T Consensus 104 --~~~~~~~--------~~~Gi~~~~~~~g~~~---~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~ 170 (417)
T 3v76_A 104 --QDFVALV--------ERHGIGWHEKTLGQLF---CDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTS 170 (417)
T ss_dssp --HHHHHHH--------HHTTCCEEECSTTEEE---ESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEET
T ss_pred --HHHHHHH--------HHcCCCcEEeeCCEEe---eCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEEC
Confidence 1111111 11122110 011111 11223345556677777778999876 666643 33 5555
Q ss_pred cCcEecccEEEEcCCCCCC
Q 014522 324 NGEKLDIDAIVLATGYRSN 342 (423)
Q Consensus 324 ~g~~~~~D~vi~a~G~~~~ 342 (423)
+| ++.+|.||+|+|..+.
T Consensus 171 ~g-~i~ad~VIlAtG~~S~ 188 (417)
T 3v76_A 171 AG-TVDAASLVVASGGKSI 188 (417)
T ss_dssp TE-EEEESEEEECCCCSSC
T ss_pred Cc-EEEeeEEEECCCCccC
Confidence 66 8999999999998763
No 276
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.71 E-value=5.1e-05 Score=69.39 Aligned_cols=32 Identities=22% Similarity=0.390 Sum_probs=30.0
Q ss_pred EEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 193 KVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 193 ~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
+|+|||+|+.|+.+|..+++.|.+|+++.+..
T Consensus 8 DVvIIGaGpAGlsAA~~lar~g~~v~lie~~~ 39 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRARKQIALFDNNT 39 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 69999999999999999999999999998864
No 277
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=97.67 E-value=7.4e-05 Score=73.35 Aligned_cols=129 Identities=19% Similarity=0.165 Sum_probs=73.7
Q ss_pred CCCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHhhccHHHHHHHHHHHHHHHhcccc
Q 014522 190 KGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPLWLVDKILLILAWFILGNTE 269 (423)
Q Consensus 190 ~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (423)
...+|+|||+|.+|+.+|..|++.|.+|+++.+.+. +......... .........+... ...+.
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~-~g~~~~~~~~--~~~~~~l~~~g~~-----------~~~~~-- 154 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIK-FSRHNVLHLW--PFTIHDLRALGAK-----------KFYGR-- 154 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSS-CCCCCEEECC--HHHHHHHHTTTHH-----------HHCTT--
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccc-cCCCCcccCC--hhHHHHHHHcCCc-----------ccccc--
Confidence 457999999999999999999999999999999873 2110000000 0000000011000 00000
Q ss_pred ccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEeCC-------eEEE--c-cC--cEecccEEEE
Q 014522 270 SYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISCG-------QAEL--I-NG--EKLDIDAIVL 335 (423)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~-------~v~~--~-~g--~~~~~D~vi~ 335 (423)
+.. .... ......+...+.+.+++.+++++.+ +..+..+ .|.+ . +| +++.+|.||.
T Consensus 155 -----~~~-~~~~----~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~ 224 (497)
T 2bry_A 155 -----FCT-GTLD----HISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLIS 224 (497)
T ss_dssp -----TTC-TTCC----EEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEE
T ss_pred -----ccc-cccc----cCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEE
Confidence 000 0000 0001234445566666778998877 6777642 2555 3 55 4799999999
Q ss_pred cCCCCCCCC
Q 014522 336 ATGYRSNVP 344 (423)
Q Consensus 336 a~G~~~~~~ 344 (423)
|+|..+...
T Consensus 225 A~G~~S~~r 233 (497)
T 2bry_A 225 AAGGKFVPE 233 (497)
T ss_dssp CCCTTCCCT
T ss_pred CCCCCcccc
Confidence 999988753
No 278
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=97.64 E-value=8.9e-05 Score=73.25 Aligned_cols=35 Identities=26% Similarity=0.421 Sum_probs=32.5
Q ss_pred CCCEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 190 KGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 190 ~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
...+|+|||+|.+|+.+|..|++.|.+|+++.+.+
T Consensus 106 ~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~ 140 (549)
T 3nlc_A 106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGK 140 (549)
T ss_dssp CCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccC
Confidence 34689999999999999999999999999999986
No 279
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.63 E-value=2.2e-05 Score=73.49 Aligned_cols=34 Identities=26% Similarity=0.431 Sum_probs=31.4
Q ss_pred CCeEEECCChHHHHHHHHHHHcC------CCEEEEecCCC
Q 014522 22 NGPVIVGAGPSGLATAACLRDQG------VPFVMLERAEC 55 (423)
Q Consensus 22 ~~vvIIGaG~aGl~~A~~L~~~g------~~v~lie~~~~ 55 (423)
+||+|||||++|+++|+.|+++| .+|+|+|+...
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~ 40 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFT 40 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCG
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCC
Confidence 38999999999999999999998 89999999753
No 280
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.63 E-value=3.4e-05 Score=78.56 Aligned_cols=43 Identities=28% Similarity=0.402 Sum_probs=38.8
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCccccc
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQK 62 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~ 62 (423)
..+||+|||||++|+++|..|.+.|++|+|+|+.+.+||.+..
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~~ 148 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVAT 148 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTCCE
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCcccc
Confidence 4679999999999999999999999999999999988885443
No 281
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.61 E-value=3.5e-05 Score=77.67 Aligned_cols=40 Identities=33% Similarity=0.364 Sum_probs=36.8
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCccc
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLW 60 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~ 60 (423)
.+||+|||||++|+++|..|++.|++|+|||+.+..||.+
T Consensus 46 ~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 46 KYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLK 85 (623)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSS
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcc
Confidence 5799999999999999999999999999999998877644
No 282
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.60 E-value=4.1e-05 Score=79.56 Aligned_cols=42 Identities=29% Similarity=0.411 Sum_probs=38.4
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccc
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQ 61 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~ 61 (423)
..++|+|||||++|+++|..|.++|++|+|+|+.+.+||.+.
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~~~ 318 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVA 318 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCcee
Confidence 467999999999999999999999999999999999988543
No 283
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.58 E-value=0.00025 Score=70.06 Aligned_cols=100 Identities=15% Similarity=0.104 Sum_probs=70.0
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
.++|+|||+|..|+.+|..|++.|.+|+++++.+.+. .. ..
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~----------------------------------~~-----~~ 395 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK----------------------------------AD-----QV 395 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCC----------------------------------SC-----HH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccC----------------------------------cC-----HH
Confidence 5689999999999999999999999999999865321 00 22
Q ss_pred HHHHHHH-cCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcC
Q 014522 101 LESYAEK-FEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 101 ~~~~~~~-~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~ 164 (423)
+.+.+.+ .+++++.++.++.+..++. ....+.+.+..+ +....+.+|.||+|+| ..|+.
T Consensus 396 l~~~l~~~~gV~v~~~~~v~~i~~~~~-~v~~v~~~~~~~--g~~~~i~~D~vi~a~G--~~pn~ 455 (521)
T 1hyu_A 396 LQDKVRSLKNVDIILNAQTTEVKGDGS-KVVGLEYRDRVS--GDIHSVALAGIFVQIG--LLPNT 455 (521)
T ss_dssp HHHHHTTCTTEEEECSEEEEEEEECSS-SEEEEEEEETTT--CCEEEEECSEEEECCC--EEESC
T ss_pred HHHHHhcCCCcEEEeCCEEEEEEcCCC-cEEEEEEEeCCC--CceEEEEcCEEEECcC--CCCCc
Confidence 3333444 4889999999999986531 221245443111 1335799999999999 55543
No 284
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.57 E-value=0.00012 Score=67.11 Aligned_cols=101 Identities=17% Similarity=0.104 Sum_probs=63.3
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
.++++|||||..|+.+|..|.+.|.+|+++++....- ... ..
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~~----------------------------------~~~----~~ 193 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFR----------------------------------ASK----TM 193 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC----------------------------------SCH----HH
T ss_pred CCeEEEECCChHHHHHHHHHHHhCCeeeeeccccccc----------------------------------ccc----hh
Confidence 4689999999999999999999999999999754210 011 11
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCcC
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~~ 164 (423)
........+...+....+..+....... -.+...+... +..+.+.+|.|++|+| ..|+.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~--~~~~~i~~d~vi~a~G--~~pn~ 252 (314)
T 4a5l_A 194 QERVLNHPKIEVIWNSELVELEGDGDLL-NGAKIHNLVS--GEYKVVPVAGLFYAIG--HSPNS 252 (314)
T ss_dssp HHHHHTCTTEEEECSEEEEEEEESSSSE-EEEEEEETTT--CCEEEEECSEEEECSC--EEESC
T ss_pred hhhhhcccceeeEeeeeeEEEEeeeecc-ceeEEeeccc--ccceeeccccceEecc--cccCh
Confidence 1222223345555666666665543211 1122222111 1347899999999999 56654
No 285
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.56 E-value=0.00018 Score=67.98 Aligned_cols=140 Identities=18% Similarity=0.160 Sum_probs=75.3
Q ss_pred CCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHhhccHHHHHHHHHHHHHHHhcc-cc
Q 014522 191 GKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPLWLVDKILLILAWFILGN-TE 269 (423)
Q Consensus 191 ~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 269 (423)
..+|+|||+|.+|+.+|..|++.|.+|+++.+.+. ..+.. .+..-..-.....+.+. +.+.+. . .+. ..
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~-~~~~~-~~~~l~~~~~~~l~~~g--~~~~~~----~--~~~~~~ 80 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSE-LRAFG-AGIYLWHNGLRVLEGLG--ALDDVL----Q--GSHTPP 80 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS-CCCCS-SEEEEEHHHHHHHHHTT--CHHHHH----T--TCBCCS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC-CCCCC-ceEEeCccHHHHHHHcC--CHHHHH----h--hCCCcc
Confidence 46899999999999999999999999999999873 21100 00000000000111100 000000 0 000 00
Q ss_pred ccCCCCCCCCccc-------ccccCCCccccChhhhhhhhcCCeEEecC--ceEEeCC-eEEEccCcEecccEEEEcCCC
Q 014522 270 SYGLKRPSMGPLA-------LKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRISCG-QAELINGEKLDIDAIVLATGY 339 (423)
Q Consensus 270 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~-~v~~~~g~~~~~D~vi~a~G~ 339 (423)
...+... +... .......+..+...+.+.+.+.+++++.+ +..+..+ .|++.+|+++.+|.||.|+|.
T Consensus 81 ~~~~~~~--g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~v~~~~g~~~~ad~vV~AdG~ 158 (379)
T 3alj_A 81 TYETWMH--NKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADPVGRLTLQTGEVLEADLIVGADGV 158 (379)
T ss_dssp CEEEEET--TEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEETTTEEEETTSCEEECSEEEECCCT
T ss_pred ceEEEeC--CceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEeCCEEEECCCCEEEcCEEEECCCc
Confidence 0000000 0000 00000112334555666677778998876 6666533 577788989999999999998
Q ss_pred CCC
Q 014522 340 RSN 342 (423)
Q Consensus 340 ~~~ 342 (423)
.+.
T Consensus 159 ~s~ 161 (379)
T 3alj_A 159 GSK 161 (379)
T ss_dssp TCH
T ss_pred cHH
Confidence 764
No 286
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.52 E-value=0.00018 Score=69.90 Aligned_cols=35 Identities=11% Similarity=0.019 Sum_probs=32.3
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAEC 55 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~ 55 (423)
.++|+|||+|..|+.+|..|.+.|.+|+++++.+.
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~ 231 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTA 231 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCC
Confidence 57899999999999999999999999999998753
No 287
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=97.50 E-value=0.00017 Score=68.69 Aligned_cols=33 Identities=15% Similarity=0.334 Sum_probs=31.2
Q ss_pred CEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 192 KKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
-+|+|||+|.+|+.+|..|++.|.+|+++.+.+
T Consensus 5 ~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~ 37 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGK 37 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 469999999999999999999999999999987
No 288
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=97.50 E-value=0.00014 Score=70.51 Aligned_cols=149 Identities=19% Similarity=0.248 Sum_probs=75.6
Q ss_pred CEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccc-cC-----CChH-HHHHHHHhhcc---HHHHHHHHHHHH
Q 014522 192 KKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREI-LG-----KSTF-ELATLMMKWLP---LWLVDKILLILA 261 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~-~~-----~~~~-~~~~~~~~~~~---~~~~~~~~~~~~ 261 (423)
-+|+|||+|.+|+-+|..|++.|.+|+++.+.+. +..... .+ ..+. ... .+...++ ......+..+..
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~-~g~~~~~sg~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 104 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNK-LGRKLAISGGGRCNVTNRLPLD-EIVKHIPGNGRFLYSAFSIFNN 104 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS-SCHHHHHTGGGTCCCEECSCHH-HHHHTCTBTGGGGHHHHHHSCH
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCC-CCceeEEeCCCceeccCcccHH-HHHHHhccChHHHHHHHHhcCH
Confidence 4799999999999999999999999999998872 211000 00 0000 000 0011110 000000000000
Q ss_pred HHHhccccccCCCCCCCCcccccccCCCccccChhhhhhhhcCCeEEecC--ceEEe--CCe---EEEccCcEecccEEE
Q 014522 262 WFILGNTESYGLKRPSMGPLALKNTMGKTPVLDIGALKKIRSGHINVVPG--IKRIS--CGQ---AELINGEKLDIDAIV 334 (423)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~--~~~---v~~~~g~~~~~D~vi 334 (423)
.....-+...++...................+...+.+.+++.+++++.+ +.++. .++ |.+.+|+++.+|.||
T Consensus 105 ~~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad~VV 184 (447)
T 2i0z_A 105 EDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNHVV 184 (447)
T ss_dssp HHHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEECSCEE
T ss_pred HHHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEECCEEE
Confidence 00000011122211000000000001112344456667777789999876 66654 332 667788789999999
Q ss_pred EcCCCCCC
Q 014522 335 LATGYRSN 342 (423)
Q Consensus 335 ~a~G~~~~ 342 (423)
+|+|..+.
T Consensus 185 lAtGg~s~ 192 (447)
T 2i0z_A 185 IAVGGKSV 192 (447)
T ss_dssp ECCCCSSS
T ss_pred ECCCCCcC
Confidence 99998773
No 289
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.40 E-value=0.00074 Score=61.73 Aligned_cols=35 Identities=14% Similarity=0.255 Sum_probs=32.1
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAEC 55 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~ 55 (423)
.++|+|||||+.|+.+|..|++.|.+|+|+++.+.
T Consensus 145 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 179 (312)
T 4gcm_A 145 NKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDE 179 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEecccc
Confidence 46899999999999999999999999999998753
No 290
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.40 E-value=0.00042 Score=67.01 Aligned_cols=34 Identities=12% Similarity=-0.001 Sum_probs=31.7
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCC-EEEEecCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVP-FVMLERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~-v~lie~~~ 54 (423)
.++|+|||+|..|+.+|..|.+.+.+ |+++++.+
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~ 246 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGG 246 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCC
Confidence 57899999999999999999999998 99999875
No 291
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.38 E-value=0.00028 Score=68.30 Aligned_cols=34 Identities=21% Similarity=0.297 Sum_probs=30.9
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCC-CEEEEecCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGV-PFVMLERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~-~v~lie~~~ 54 (423)
.++|+|||||..|+.+|..+.+.|. +|+++++.+
T Consensus 264 gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~ 298 (456)
T 2vdc_G 264 GKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRD 298 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCC
Confidence 5689999999999999999999998 599999865
No 292
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.38 E-value=0.00054 Score=72.70 Aligned_cols=98 Identities=16% Similarity=0.089 Sum_probs=70.1
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQY 100 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (423)
..+|+|||+|+.|+.+|..|.+.|.+|+|+++.+.+. ..
T Consensus 284 gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~------------------------------------~~----- 322 (965)
T 2gag_A 284 GARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS------------------------------------AA----- 322 (965)
T ss_dssp CSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC------------------------------------HH-----
T ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc------------------------------------hh-----
Confidence 3689999999999999999999999999999875320 11
Q ss_pred HHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcc--cC--CCCCceEEEEeCEEEEccCCCCCCcC
Q 014522 101 LESYAEKFEINPRFNECVQSARYDETSGLWRVKTAS--SA--GSTKTEFEYICRWLVVATGENAERVM 164 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~--~~--~~~~~~~~~~~d~vviAtG~~~~~~~ 164 (423)
.+.+++.+++++.++.|+.+....+.....|++.+ .. + +...++.+|.||+|+| ..|+.
T Consensus 323 -~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~--G~~~~i~~D~Vv~a~G--~~P~~ 385 (965)
T 2gag_A 323 -AAQAVADGVQVISGSVVVDTEADENGELSAIVVAELDEAREL--GGTQRFEADVLAVAGG--FNPVV 385 (965)
T ss_dssp -HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCE--EEEEEEECSEEEEECC--EEECC
T ss_pred -HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCC--CceEEEEcCEEEECCC--cCcCh
Confidence 33456779999999999999873111322244432 10 0 1236899999999999 55543
No 293
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.37 E-value=0.0003 Score=64.82 Aligned_cols=33 Identities=21% Similarity=0.411 Sum_probs=30.9
Q ss_pred CEEEEECCCCCHHHHHHHHhcc--CCccEEEEecC
Q 014522 192 KKVLVVGCGNSGMELSLDLSNH--NASPSMVVRSS 224 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~~--g~~V~~v~r~~ 224 (423)
-+|+|||+|.+|+-+|..|++. |.+|.++.+.+
T Consensus 80 ~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~ 114 (344)
T 3jsk_A 80 TDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGV 114 (344)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSS
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCC
Confidence 4799999999999999999997 99999999986
No 294
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=97.35 E-value=0.0005 Score=66.02 Aligned_cols=32 Identities=28% Similarity=0.423 Sum_probs=30.3
Q ss_pred EEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 193 KVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 193 ~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
+|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~ 34 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNAGKKVLLLEGGE 34 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECCcHHHHHHHHHHHHcCCeEEEEecCC
Confidence 79999999999999999999999999999865
No 295
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.31 E-value=0.00014 Score=72.35 Aligned_cols=36 Identities=36% Similarity=0.556 Sum_probs=33.1
Q ss_pred cccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 19 IWVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 19 ~~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
...+|++|||+|++|+.+|..|.+.|++|+|+|+..
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~ 40 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGG 40 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 457899999999999999999999999999999875
No 296
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=97.28 E-value=0.00059 Score=68.25 Aligned_cols=33 Identities=15% Similarity=0.372 Sum_probs=31.0
Q ss_pred CEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 192 KKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
-+|+|||+|..|+++|..+++.|.+|.++.+++
T Consensus 29 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~ 61 (651)
T 3ces_A 29 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNI 61 (651)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CCEEEECChHHHHHHHHHHHhCCCCEEEEeecc
Confidence 489999999999999999999999999999874
No 297
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.27 E-value=0.0002 Score=73.63 Aligned_cols=104 Identities=13% Similarity=0.042 Sum_probs=68.3
Q ss_pred cCCeEEEC--CChHHHHHHHHHHHcCCCEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHH
Q 014522 21 VNGPVIVG--AGPSGLATAACLRDQGVPFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFI 98 (423)
Q Consensus 21 ~~~vvIIG--aG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (423)
..+|+||| ||..|+.+|..|++.|.+|+++++.+ +...... + .. .
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~~~~--------------------------~--~~----~ 574 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LANYMHF--------------------------T--LE----Y 574 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTHHHHH--------------------------T--TC----H
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-ccccccc--------------------------c--cc----H
Confidence 45899999 99999999999999999999999876 3210000 0 01 1
Q ss_pred HHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCC--------------CCceEEEEeCEEEEccCCCCCCc
Q 014522 99 QYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGS--------------TKTEFEYICRWLVVATGENAERV 163 (423)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~--------------~~~~~~~~~d~vviAtG~~~~~~ 163 (423)
..+.+.+++.+++++.+++|+++.. +...+......+. .+....+.+|.||+|+| ..|.
T Consensus 575 ~~~~~~l~~~GV~i~~~~~v~~i~~----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G--~~p~ 647 (729)
T 1o94_A 575 PNMMRRLHELHVEELGDHFCSRIEP----GRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTG--RHSE 647 (729)
T ss_dssp HHHHHHHHHTTCEEECSEEEEEEET----TEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESC--EEEC
T ss_pred HHHHHHHHhCCCEEEcCcEEEEEEC----CeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCC--CCCC
Confidence 3445556677999999999998863 2222332110000 00113499999999999 5554
No 298
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=97.27 E-value=0.00063 Score=64.61 Aligned_cols=33 Identities=27% Similarity=0.425 Sum_probs=31.3
Q ss_pred CEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 192 KKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
.+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~ 39 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVVEQAR 39 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 479999999999999999999999999999987
No 299
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.27 E-value=0.00022 Score=70.76 Aligned_cols=34 Identities=12% Similarity=0.212 Sum_probs=31.6
Q ss_pred CCEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 191 GKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 191 ~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
..+|+|||+|.+|+.+|..|++.|.+|+++.+++
T Consensus 9 ~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~ 42 (545)
T 3uox_A 9 ALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGE 42 (545)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 3589999999999999999999999999999986
No 300
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.25 E-value=0.00036 Score=63.92 Aligned_cols=32 Identities=22% Similarity=0.486 Sum_probs=30.4
Q ss_pred EEEEECCCCCHHHHHHHHhcc--CCccEEEEecC
Q 014522 193 KVLVVGCGNSGMELSLDLSNH--NASPSMVVRSS 224 (423)
Q Consensus 193 ~v~ViG~G~~~~e~a~~l~~~--g~~V~~v~r~~ 224 (423)
+|+|||+|.+|+-+|..|++. |.+|+++.+.+
T Consensus 67 dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~ 100 (326)
T 2gjc_A 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSV 100 (326)
T ss_dssp SEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSS
T ss_pred CEEEECccHHHHHHHHHHHhcCCCCeEEEEecCc
Confidence 799999999999999999998 99999999876
No 301
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.23 E-value=0.00033 Score=70.07 Aligned_cols=45 Identities=13% Similarity=0.173 Sum_probs=42.0
Q ss_pred cccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCcccccc
Q 014522 19 IWVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECIASLWQKR 63 (423)
Q Consensus 19 ~~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~ 63 (423)
++.|||+|||+|..|..+|..|++.|.+|++||++++.||.|...
T Consensus 6 ~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~~~ 50 (650)
T 1vg0_A 6 PSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASF 50 (650)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEE
T ss_pred CCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCccccc
Confidence 468999999999999999999999999999999999999988763
No 302
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.21 E-value=0.00015 Score=71.68 Aligned_cols=35 Identities=31% Similarity=0.365 Sum_probs=31.4
Q ss_pred ccCCeEEECCChHHHHHHHHHHH-cCCCEEEEecCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRD-QGVPFVMLERAE 54 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~-~g~~v~lie~~~ 54 (423)
..||+||||||++|+.+|.+|.+ .+++|+|+|+.+
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~ 51 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGE 51 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSB
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCC
Confidence 47999999999999999999998 578999999864
No 303
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=97.20 E-value=0.0011 Score=66.33 Aligned_cols=34 Identities=21% Similarity=0.442 Sum_probs=31.8
Q ss_pred CCEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 191 GKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 191 ~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
..+|+|||+|.+|+.+|..|++.|.+|+++.+.+
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~ 159 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEP 159 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 3579999999999999999999999999999987
No 304
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.20 E-value=0.00044 Score=68.64 Aligned_cols=33 Identities=21% Similarity=0.271 Sum_probs=31.1
Q ss_pred CEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 192 KKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
.+|+|||+|.+|+.+|..|++.|.+|+++.+++
T Consensus 22 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~ 54 (549)
T 4ap3_A 22 YDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAAS 54 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECchHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 589999999999999999999999999999976
No 305
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.20 E-value=0.00044 Score=68.49 Aligned_cols=33 Identities=15% Similarity=0.220 Sum_probs=30.9
Q ss_pred CEEEEECCCCCHHHHHHHHh-ccCCccEEEEecC
Q 014522 192 KKVLVVGCGNSGMELSLDLS-NHNASPSMVVRSS 224 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~-~~g~~V~~v~r~~ 224 (423)
.+|+|||+|.+|+.+|..|+ +.|.+|+++.+++
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~ 42 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKAD 42 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred CCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCC
Confidence 47999999999999999999 8999999999976
No 306
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.17 E-value=0.00082 Score=68.53 Aligned_cols=127 Identities=15% Similarity=0.005 Sum_probs=65.5
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEec--CCCCCc---cccccc----CCceeecCCCccccCCCCCCCCCCCCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLER--AECIAS---LWQKRT----YDRLNLHLPKQFCQLPKLQFPEDFPEY 91 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~--~~~~gg---~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (423)
..+|+|||||..|+.+|..|.+.|.+++++-. ....|. ...... .+.... ......-+... +......
T Consensus 494 ~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~v~l~~~~--~~~l~~~ 570 (671)
T 1ps9_A 494 GNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPR-SPRQIVMLQRK--ASKPGQG 570 (671)
T ss_dssp CSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCCCC-CSSEEEEECSS--CSCTTTT
T ss_pred CCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhcccccccccccccccccccCC-CCcEEEEEEec--chhhccc
Confidence 56899999999999999999999876654200 000000 000000 000000 00000000000 0000000
Q ss_pred CCHHHHHHHHHHHHHHcCCceeccceEEEEEEeCCCCeEEEEEcccCCCCCceEEEEeCEEEEccCCCCCCc
Q 014522 92 PTKRQFIQYLESYAEKFEINPRFNECVQSARYDETSGLWRVKTASSAGSTKTEFEYICRWLVVATGENAERV 163 (423)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vviAtG~~~~~~ 163 (423)
.......++.+..++.+++++.+++|+.++. +...+. .+ +....+.+|.||+|+| ..|+
T Consensus 571 -l~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~----~~v~~~-~~-----G~~~~i~~D~Vi~a~G--~~p~ 629 (671)
T 1ps9_A 571 -LGKTTGWIHRTTLLSRGVKMIPGVSYQKIDD----DGLHVV-IN-----GETQVLAVDNVVICAG--QEPN 629 (671)
T ss_dssp -SCTTTHHHHHHHHHHTTCEEECSCEEEEEET----TEEEEE-ET-----TEEEEECCSEEEECCC--EEEC
T ss_pred -cccccHHHHHHHHHhcCCEEEeCcEEEEEeC----CeEEEe-cC-----CeEEEEeCCEEEECCC--cccc
Confidence 0111233445566778999999999998862 333233 23 1336799999999999 5554
No 307
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=97.16 E-value=0.00011 Score=73.26 Aligned_cols=33 Identities=24% Similarity=0.355 Sum_probs=31.0
Q ss_pred CEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 192 KKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
-+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~ 82 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAGGVGALVLEKLV 82 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 479999999999999999999999999999987
No 308
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.15 E-value=0.00039 Score=66.13 Aligned_cols=32 Identities=28% Similarity=0.425 Sum_probs=30.8
Q ss_pred EEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 193 KVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 193 ~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
+|+|||+|.+|+-+|..|++.|.+|+++.|.+
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~ 34 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNS 34 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 79999999999999999999999999999877
No 309
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=97.13 E-value=0.00098 Score=66.43 Aligned_cols=143 Identities=15% Similarity=0.044 Sum_probs=73.4
Q ss_pred CEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccc---cCCChH-HHHHHHHhhccHHHHHHHHHHHHHHHhcc
Q 014522 192 KKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREI---LGKSTF-ELATLMMKWLPLWLVDKILLILAWFILGN 267 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (423)
-+|+|||+|..|+++|..+++.|.+|.++.+++..+..... .++... .+...+ ..+... +....+...-.
T Consensus 28 yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~el-dalgg~-----~~~~~d~~gi~ 101 (637)
T 2zxi_A 28 FDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREI-DALGGE-----MGKAIDQTGIQ 101 (637)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHH-HHHTCS-----HHHHHHHHEEE
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHH-HHhhhH-----HHHHhhhcccc
Confidence 47999999999999999999999999999987422111000 011100 010000 000000 00000000000
Q ss_pred ccccCCCCCCCCcc-cccccCCCccccChhhhhhhhc-CCeEEecC-ceEEe--CC---eEEEccCcEecccEEEEcCCC
Q 014522 268 TESYGLKRPSMGPL-ALKNTMGKTPVLDIGALKKIRS-GHINVVPG-IKRIS--CG---QAELINGEKLDIDAIVLATGY 339 (423)
Q Consensus 268 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~-i~~~~--~~---~v~~~~g~~~~~D~vi~a~G~ 339 (423)
..... ...++. .......-...+...+.+.+++ .+++++.. +..+. .+ +|.+.+|.++.||.||+|||.
T Consensus 102 f~~l~---~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~ 178 (637)
T 2zxi_A 102 FKMLN---TRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIKQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGT 178 (637)
T ss_dssp EEEES---TTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTT
T ss_pred eeecc---cccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEEEeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCC
Confidence 00000 000110 0000000012344455566666 58988655 66553 23 367788999999999999998
Q ss_pred CCCC
Q 014522 340 RSNV 343 (423)
Q Consensus 340 ~~~~ 343 (423)
.++.
T Consensus 179 ~s~~ 182 (637)
T 2zxi_A 179 FLNG 182 (637)
T ss_dssp CBTC
T ss_pred CccC
Confidence 7654
No 310
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.12 E-value=0.00014 Score=73.72 Aligned_cols=36 Identities=22% Similarity=0.271 Sum_probs=33.9
Q ss_pred cCCeEEECCChHHHHHHHHHHHcC--------CCEEEEecCC-CC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQG--------VPFVMLERAE-CI 56 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g--------~~v~lie~~~-~~ 56 (423)
.++|+|||||++|+++|..|.+.| ++|+|+|+.+ .+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 468999999999999999999998 9999999998 88
No 311
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.11 E-value=0.00022 Score=70.60 Aligned_cols=36 Identities=36% Similarity=0.389 Sum_probs=33.0
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECI 56 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~ 56 (423)
..+|+||||||++|+.+|.+|.+ |.+|+|+|+.+..
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCG
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCc
Confidence 46899999999999999999999 9999999997654
No 312
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=97.09 E-value=0.00092 Score=63.48 Aligned_cols=35 Identities=26% Similarity=0.332 Sum_probs=32.5
Q ss_pred CCEEEEECCCCCHHHHHHHHhccCCccEEEEecCc
Q 014522 191 GKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSV 225 (423)
Q Consensus 191 ~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~ 225 (423)
..+|+|||+|.+|+.+|..|++.|.+|+++.+.+.
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 39 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQ 39 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 46899999999999999999999999999999873
No 313
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=97.06 E-value=0.00021 Score=68.38 Aligned_cols=33 Identities=21% Similarity=0.318 Sum_probs=31.3
Q ss_pred CEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 192 KKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
.+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 479999999999999999999999999999986
No 314
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=97.02 E-value=0.0011 Score=66.19 Aligned_cols=34 Identities=24% Similarity=0.359 Sum_probs=31.6
Q ss_pred CCEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 191 GKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 191 ~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
.-+|+|||+|..|+++|..+++.|.+|.++.+.+
T Consensus 21 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~ 54 (641)
T 3cp8_A 21 MYDVIVVGAGHAGCEAALAVARGGLHCLLITSDL 54 (641)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEEecc
Confidence 3589999999999999999999999999999875
No 315
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=97.02 E-value=0.0013 Score=65.72 Aligned_cols=33 Identities=33% Similarity=0.524 Sum_probs=31.2
Q ss_pred CEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 192 KKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
-+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 122 ~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~ 154 (566)
T 1qo8_A 122 TQVLVVGAGSAGFNASLAAKKAGANVILVDKAP 154 (566)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 479999999999999999999999999999987
No 316
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=97.01 E-value=0.00085 Score=67.12 Aligned_cols=146 Identities=22% Similarity=0.241 Sum_probs=75.8
Q ss_pred CCEEEEECCCCCHHHHHHHHhccCCccEEEEecCceeecccccCCChHHHHHHHHhhccHHHHHHHHHHHHHHHhccccc
Q 014522 191 GKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSSVHVLPREILGKSTFELATLMMKWLPLWLVDKILLILAWFILGNTES 270 (423)
Q Consensus 191 ~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (423)
..+|+|||+|.+|+-+|..|++.|.+|+++.+.+. +....+..-......+.+.+.. .+.+.........+....
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~---~~~~~G~~l~p~~~~~l~~lGl--~~~l~~~~~~~~~~~~~~ 97 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAF---PRYRVGESLLPGTMSILNRLGL--QEKIDAQNYVKKPSATFL 97 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCS---SCCCCCCBCCHHHHHHHHHTTC--HHHHHHHCCEEECEEEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCC---CCCceeeeECHHHHHHHHHcCC--cHHHHhcCCcccCCcEEE
Confidence 46999999999999999999999999999999862 2111111100111111111100 011100000000000000
Q ss_pred cC---------CCCCCCCccccc-ccCCCccccChhhhhhhhcCCeEEecC--ceEEeCC-----eEEEc-cC--cEecc
Q 014522 271 YG---------LKRPSMGPLALK-NTMGKTPVLDIGALKKIRSGHINVVPG--IKRISCG-----QAELI-NG--EKLDI 330 (423)
Q Consensus 271 ~~---------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~-----~v~~~-~g--~~~~~ 330 (423)
.+ .......+.... ...-.+..+...+.+.+++.+++++.+ +..+..+ +|.+. +| .++.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~A 177 (591)
T 3i3l_A 98 WGQDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVES 177 (591)
T ss_dssp CSSSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEE
T ss_pred ecCCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEc
Confidence 00 000000000000 001113345556666777789999876 7777642 26666 66 57999
Q ss_pred cEEEEcCCCCC
Q 014522 331 DAIVLATGYRS 341 (423)
Q Consensus 331 D~vi~a~G~~~ 341 (423)
|.||.|+|...
T Consensus 178 dlVV~AdG~~S 188 (591)
T 3i3l_A 178 DFVIDAGGSGG 188 (591)
T ss_dssp SEEEECCGGGC
T ss_pred CEEEECCCCcc
Confidence 99999999866
No 317
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.99 E-value=0.004 Score=66.54 Aligned_cols=99 Identities=12% Similarity=0.124 Sum_probs=64.0
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCC-CEEEEecCCCCCcccccccCCceeecCCCccccCCCCCCCCCCCCCCCHHHHHH
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGV-PFVMLERAECIASLWQKRTYDRLNLHLPKQFCQLPKLQFPEDFPEYPTKRQFIQ 99 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~-~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (423)
..+|+|||||..|+.+|..+.+.|. +|+++++.+.. ..+ ....++
T Consensus 332 ~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~------------------------------~~~--~~~~e~-- 377 (1025)
T 1gte_A 332 RGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFV------------------------------NIR--AVPEEV-- 377 (1025)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGG------------------------------GCC--SCHHHH--
T ss_pred CCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecChh------------------------------hCC--CCHHHH--
Confidence 3489999999999999999999996 89999986410 000 012222
Q ss_pred HHHHHHHHcCCceeccceEEEEEEeCCCCeE-EEEEcc----cCCC----CCceEEEEeCEEEEccCC
Q 014522 100 YLESYAEKFEINPRFNECVQSARYDETSGLW-RVKTAS----SAGS----TKTEFEYICRWLVVATGE 158 (423)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~-~v~~~~----~~~~----~~~~~~~~~d~vviAtG~ 158 (423)
+.+++.|++++.++.+..+...+ +.. .|.+.. .++. .++...+.+|.||+|+|.
T Consensus 378 ---~~~~~~Gv~~~~~~~~~~i~~~~--g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~ 440 (1025)
T 1gte_A 378 ---ELAKEEKCEFLPFLSPRKVIVKG--GRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGS 440 (1025)
T ss_dssp ---HHHHHTTCEEECSEEEEEEEEET--TEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCE
T ss_pred ---HHHHHcCCEEEeCCCceEEEccC--CeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCC
Confidence 24556799988888888876543 321 122210 0000 012257999999999993
No 318
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.98 E-value=0.0032 Score=60.89 Aligned_cols=35 Identities=26% Similarity=0.385 Sum_probs=30.2
Q ss_pred cCCeEEECCChHHHHHHHHHHHc--------------------CC-CEEEEecCCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQ--------------------GV-PFVMLERAEC 55 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~--------------------g~-~v~lie~~~~ 55 (423)
..+|+|||+|..|+.+|..|.+. |. +|+|+++...
T Consensus 147 ~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~ 202 (456)
T 1lqt_A 147 GARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGP 202 (456)
T ss_dssp SSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCCh
Confidence 46799999999999999999974 54 8999998763
No 319
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=96.97 E-value=0.0012 Score=62.60 Aligned_cols=33 Identities=24% Similarity=0.417 Sum_probs=31.1
Q ss_pred CEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 192 KKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
.+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 35 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQT 35 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 369999999999999999999999999999987
No 320
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.96 E-value=0.0039 Score=60.37 Aligned_cols=35 Identities=26% Similarity=0.318 Sum_probs=30.6
Q ss_pred cCCeEEECCChHHHHHHHHHH--------------------HcCC-CEEEEecCCC
Q 014522 21 VNGPVIVGAGPSGLATAACLR--------------------DQGV-PFVMLERAEC 55 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~--------------------~~g~-~v~lie~~~~ 55 (423)
..+|+|||+|..|+.+|..|+ +.|. +|+|+++.+.
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP 200 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCCh
Confidence 468999999999999999999 5687 6999998753
No 321
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=96.95 E-value=0.00023 Score=67.92 Aligned_cols=35 Identities=17% Similarity=0.289 Sum_probs=32.2
Q ss_pred CCCEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 190 KGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 190 ~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
..-+|+|||+|.+|+-+|..|++.|.+|+++.|.+
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~ 56 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVK 56 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 34689999999999999999999999999999987
No 322
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.91 E-value=0.0017 Score=61.17 Aligned_cols=33 Identities=15% Similarity=0.427 Sum_probs=31.0
Q ss_pred CEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 192 KKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
.+|+|||+|.+|+-+|..|++.|.+|+++.+..
T Consensus 6 ~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~ 38 (382)
T 1y56_B 6 SEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRF 38 (382)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 579999999999999999999999999999875
No 323
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=96.86 E-value=0.00053 Score=68.30 Aligned_cols=36 Identities=28% Similarity=0.300 Sum_probs=33.0
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcC-CCEEEEecCCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQG-VPFVMLERAEC 55 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g-~~v~lie~~~~ 55 (423)
..+|+||||||.||+.+|.+|.+.+ .+|+|||+.+.
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 4589999999999999999999997 79999999765
No 324
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=96.85 E-value=0.0011 Score=65.38 Aligned_cols=33 Identities=18% Similarity=0.285 Sum_probs=31.3
Q ss_pred CEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 192 KKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
.+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~ 40 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHRVLLLEREA 40 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEccCC
Confidence 479999999999999999999999999999987
No 325
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=96.83 E-value=0.0084 Score=57.22 Aligned_cols=50 Identities=12% Similarity=0.122 Sum_probs=37.6
Q ss_pred ccChhhhhhhhcCCeEEecC--ceEEeCC--eEEEccCcEecccEEEEcCCCCC
Q 014522 292 VLDIGALKKIRSGHINVVPG--IKRISCG--QAELINGEKLDIDAIVLATGYRS 341 (423)
Q Consensus 292 ~~~~~~~~~~~~~~i~~~~~--i~~~~~~--~v~~~~g~~~~~D~vi~a~G~~~ 341 (423)
.+.+.+.+.+++.+++++.+ |+++..+ +++..+|+++++|.||+|+|...
T Consensus 190 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~vV~~~g~~~~ad~Vv~a~~~~~ 243 (421)
T 3nrn_A 190 AVIDELERIIMENKGKILTRKEVVEINIEEKKVYTRDNEEYSFDVAISNVGVRE 243 (421)
T ss_dssp HHHHHHHHHHHTTTCEEESSCCEEEEETTTTEEEETTCCEEECSEEEECSCHHH
T ss_pred HHHHHHHHHHHHCCCEEEcCCeEEEEEEECCEEEEeCCcEEEeCEEEECCCHHH
Confidence 34555666777778899877 8888743 45566888999999999998643
No 326
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=96.82 E-value=0.0017 Score=60.61 Aligned_cols=33 Identities=15% Similarity=0.292 Sum_probs=31.2
Q ss_pred CEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 192 KKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
.+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~ 37 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAGGHEVLVAEAAE 37 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 479999999999999999999999999999985
No 327
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=96.79 E-value=0.0019 Score=61.27 Aligned_cols=34 Identities=24% Similarity=0.395 Sum_probs=32.2
Q ss_pred CCEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 191 GKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 191 ~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
..+|+|||+|.+|+-+|..|++.|.+|+++.|.+
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~ 59 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDN 59 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 4689999999999999999999999999999987
No 328
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=96.78 E-value=0.00097 Score=65.50 Aligned_cols=37 Identities=27% Similarity=0.326 Sum_probs=33.6
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECI 56 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~ 56 (423)
..+|++|||+|++|+.+|..|.+.|.+|+|+|+....
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~ 40 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLW 40 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 3579999999999999999999999999999987643
No 329
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=96.76 E-value=0.00059 Score=63.36 Aligned_cols=33 Identities=21% Similarity=0.231 Sum_probs=30.5
Q ss_pred CEEEEECCCCCHHHHHHHHhc---cCCccEEEEecC
Q 014522 192 KKVLVVGCGNSGMELSLDLSN---HNASPSMVVRSS 224 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~---~g~~V~~v~r~~ 224 (423)
.+|+|||+|.+|+-+|..|++ .|.+|+++.+++
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~ 37 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKAD 37 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCC
Confidence 379999999999999999999 899999999875
No 330
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=96.74 E-value=0.00075 Score=67.19 Aligned_cols=36 Identities=28% Similarity=0.433 Sum_probs=32.7
Q ss_pred cccCCeEEECCChHHHHHHHHHHHc-CCCEEEEecCC
Q 014522 19 IWVNGPVIVGAGPSGLATAACLRDQ-GVPFVMLERAE 54 (423)
Q Consensus 19 ~~~~~vvIIGaG~aGl~~A~~L~~~-g~~v~lie~~~ 54 (423)
+..||+||||||.||+.+|.+|.+. +.+|+|+|+.+
T Consensus 17 ~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 17 GRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 3579999999999999999999986 78999999876
No 331
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.72 E-value=0.002 Score=51.24 Aligned_cols=36 Identities=25% Similarity=0.382 Sum_probs=33.3
Q ss_pred cccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 19 IWVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 19 ~~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
++..+|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 5 ~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 5 DICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 456789999999999999999999999999999875
No 332
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=96.69 E-value=0.0031 Score=62.94 Aligned_cols=34 Identities=15% Similarity=0.419 Sum_probs=31.7
Q ss_pred CCEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 191 GKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 191 ~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
..+|+|||+|..|+.+|..|++.|.+|+++.+.+
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~ 159 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEP 159 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Confidence 3579999999999999999999999999999987
No 333
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.68 E-value=0.0011 Score=65.16 Aligned_cols=36 Identities=22% Similarity=0.323 Sum_probs=33.2
Q ss_pred cccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 19 IWVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 19 ~~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
...+|++|||+|++|+.+|..|.+.|.+|+++|+..
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~ 44 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGR 44 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCC
Confidence 346899999999999999999999999999999875
No 334
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=96.65 E-value=0.0029 Score=62.16 Aligned_cols=33 Identities=27% Similarity=0.437 Sum_probs=31.3
Q ss_pred CEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 192 KKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
-+|+|||+|..|+-+|..|++.|.+|.++.+.+
T Consensus 42 ~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~ 74 (510)
T 4at0_A 42 ADVVVAGYGIAGVAASIEAARAGADVLVLERTS 74 (510)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 479999999999999999999999999999987
No 335
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=96.61 E-value=0.007 Score=55.67 Aligned_cols=33 Identities=15% Similarity=0.318 Sum_probs=31.2
Q ss_pred CEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 192 KKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
.+|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCC
Confidence 479999999999999999999999999999886
No 336
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=96.60 E-value=0.0033 Score=60.83 Aligned_cols=33 Identities=24% Similarity=0.332 Sum_probs=31.3
Q ss_pred CEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 192 KKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
-+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~ 39 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKP 39 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 479999999999999999999999999999987
No 337
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=96.59 E-value=0.011 Score=60.45 Aligned_cols=34 Identities=15% Similarity=0.239 Sum_probs=31.6
Q ss_pred CCEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 191 GKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 191 ~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
..+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 264 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~ 297 (689)
T 3pvc_A 264 CDDIAIIGGGIVSALTALALQRRGAVVTLYCADA 297 (689)
T ss_dssp CSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSS
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4689999999999999999999999999999964
No 338
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.58 E-value=0.0032 Score=54.19 Aligned_cols=36 Identities=28% Similarity=0.367 Sum_probs=32.5
Q ss_pred CCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 189 YKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 189 ~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
..+++++|||+|.+|...+..|.+.|++|+++.+..
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~ 64 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTV 64 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSC
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 467899999999999999999999999999997643
No 339
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=96.56 E-value=0.0012 Score=62.09 Aligned_cols=34 Identities=18% Similarity=0.330 Sum_probs=31.5
Q ss_pred CCEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 191 GKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 191 ~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
..+|+|||+|.+|+-+|..|++.|.+|+++.+..
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~ 50 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAKENKNTALFESGT 50 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 3589999999999999999999999999999875
No 340
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=96.56 E-value=0.0006 Score=66.90 Aligned_cols=34 Identities=24% Similarity=0.354 Sum_probs=32.1
Q ss_pred CCEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 191 GKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 191 ~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
..+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 12 ~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~ 45 (499)
T 2qa2_A 12 DASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLP 45 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 4589999999999999999999999999999987
No 341
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=96.53 E-value=0.0044 Score=58.70 Aligned_cols=34 Identities=18% Similarity=0.381 Sum_probs=31.5
Q ss_pred CCEEEEECCCCCHHHHHHHHhc-cC-CccEEEEecC
Q 014522 191 GKKVLVVGCGNSGMELSLDLSN-HN-ASPSMVVRSS 224 (423)
Q Consensus 191 ~~~v~ViG~G~~~~e~a~~l~~-~g-~~V~~v~r~~ 224 (423)
..+|+|||+|.+|+-+|..|++ .| .+|+++.+.+
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~ 56 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGW 56 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 3589999999999999999999 89 8999999876
No 342
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=96.48 E-value=0.00065 Score=66.64 Aligned_cols=34 Identities=29% Similarity=0.389 Sum_probs=32.0
Q ss_pred CCEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 191 GKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 191 ~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
.-+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 11 ~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~ 44 (500)
T 2qa1_A 11 DAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLV 44 (500)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 4579999999999999999999999999999987
No 343
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=96.47 E-value=0.0015 Score=61.68 Aligned_cols=33 Identities=24% Similarity=0.279 Sum_probs=31.3
Q ss_pred CEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 192 KKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
-+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~ 37 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRP 37 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 379999999999999999999999999999987
No 344
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.45 E-value=0.00099 Score=66.16 Aligned_cols=35 Identities=34% Similarity=0.405 Sum_probs=31.7
Q ss_pred cCCeEEECCChHHHHHHHHHHH-cCCCEEEEecCCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRD-QGVPFVMLERAEC 55 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~-~g~~v~lie~~~~ 55 (423)
.+|+||||||.||+.+|.+|.+ .+.+|+|+|+.+.
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~ 37 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVS 37 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCc
Confidence 4799999999999999999999 5899999998653
No 345
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=96.43 E-value=0.013 Score=57.89 Aligned_cols=33 Identities=30% Similarity=0.433 Sum_probs=31.6
Q ss_pred CEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 192 KKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
.+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 6 ~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~ 38 (535)
T 3ihg_A 6 VDVLVVGAGLGGLSTAMFLARQGVRVLVVERRP 38 (535)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 589999999999999999999999999999987
No 346
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=96.42 E-value=0.0056 Score=60.62 Aligned_cols=33 Identities=30% Similarity=0.363 Sum_probs=31.1
Q ss_pred CEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 192 KKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
.+|+|||+|.+|+.+|..|++.|.+|+++.+++
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~ 49 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLRELGRSVHVIETAG 49 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 479999999999999999999999999999876
No 347
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.41 E-value=0.0016 Score=64.51 Aligned_cols=36 Identities=28% Similarity=0.389 Sum_probs=33.0
Q ss_pred ccCCeEEECCChHHHHHHHHHHHc-CCCEEEEecCCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQ-GVPFVMLERAEC 55 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~-g~~v~lie~~~~ 55 (423)
+.+|++|||+|++|+.+|..|.+. |.+|+++|+...
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~ 48 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPD 48 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCc
Confidence 468999999999999999999998 899999998754
No 348
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=96.40 E-value=0.0063 Score=62.04 Aligned_cols=34 Identities=18% Similarity=0.252 Sum_probs=31.6
Q ss_pred CCEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 191 GKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 191 ~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
..+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 272 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~ 305 (676)
T 3ps9_A 272 KREAAIIGGGIASALLSLALLRRGWQVTLYCADE 305 (676)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 3689999999999999999999999999999864
No 349
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.38 E-value=0.002 Score=64.41 Aligned_cols=35 Identities=26% Similarity=0.404 Sum_probs=32.3
Q ss_pred ccCCeEEECCChHHHHHHHHHHH-cCCCEEEEecCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRD-QGVPFVMLERAE 54 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~-~g~~v~lie~~~ 54 (423)
..+|++|||+|++|+.+|..|.+ .|.+|+++|+..
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~ 58 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGF 58 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 46899999999999999999999 799999999874
No 350
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=96.24 E-value=0.01 Score=58.67 Aligned_cols=34 Identities=21% Similarity=0.351 Sum_probs=31.6
Q ss_pred CCEEEEECCCCCHHHHHHHHhc---cCCccEEEEecC
Q 014522 191 GKKVLVVGCGNSGMELSLDLSN---HNASPSMVVRSS 224 (423)
Q Consensus 191 ~~~v~ViG~G~~~~e~a~~l~~---~g~~V~~v~r~~ 224 (423)
..+|+|||+|.+|+-+|..|++ .|.+|+++.+.+
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCC
Confidence 4689999999999999999999 999999999965
No 351
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.16 E-value=0.0041 Score=50.36 Aligned_cols=35 Identities=26% Similarity=0.298 Sum_probs=31.9
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
...+|+|||+|..|..+|..|.+.|.+|+++|+++
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 35679999999999999999999999999999864
No 352
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=96.14 E-value=0.03 Score=55.11 Aligned_cols=34 Identities=15% Similarity=0.238 Sum_probs=31.4
Q ss_pred CCEEEEECCCCCHHHHHHHHhc------------cCCccEEEEecC
Q 014522 191 GKKVLVVGCGNSGMELSLDLSN------------HNASPSMVVRSS 224 (423)
Q Consensus 191 ~~~v~ViG~G~~~~e~a~~l~~------------~g~~V~~v~r~~ 224 (423)
..+|+|||+|.+|+-+|..|++ .|.+|+++.+.+
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~ 52 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPD 52 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCC
Confidence 4689999999999999999999 899999999875
No 353
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.13 E-value=0.0066 Score=48.15 Aligned_cols=34 Identities=12% Similarity=0.322 Sum_probs=31.6
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
+.+|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4689999999999999999999999999999864
No 354
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=96.07 E-value=0.023 Score=56.08 Aligned_cols=32 Identities=25% Similarity=0.558 Sum_probs=30.1
Q ss_pred CEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 192 KKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
-+|+|||+|.+|+-+|..+++ |.+|.++.+.+
T Consensus 9 ~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~ 40 (540)
T 1chu_A 9 CDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGP 40 (540)
T ss_dssp CSEEEECCSHHHHHHHHHHTT-TSCEEEECSSC
T ss_pred CCEEEECccHHHHHHHHHHhc-CCcEEEEECCC
Confidence 479999999999999999999 99999999987
No 355
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=96.00 E-value=0.019 Score=56.36 Aligned_cols=33 Identities=21% Similarity=0.356 Sum_probs=29.6
Q ss_pred CEEEEECCCCCHHHHHHHHhc---cCCccEEEEecC
Q 014522 192 KKVLVVGCGNSGMELSLDLSN---HNASPSMVVRSS 224 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~---~g~~V~~v~r~~ 224 (423)
.+|+|||+|.+|+-+|..|++ .|.+|+++.+.+
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~ 38 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGN 38 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCC
Confidence 489999999999999999999 999999999876
No 356
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=95.93 E-value=0.015 Score=56.42 Aligned_cols=31 Identities=13% Similarity=0.434 Sum_probs=29.3
Q ss_pred EEEEECCCCCHHHHHHHHhccCCccEEEEec
Q 014522 193 KVLVVGCGNSGMELSLDLSNHNASPSMVVRS 223 (423)
Q Consensus 193 ~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~ 223 (423)
+|+|||+|..|+-+|..|++.|.+|+++.+.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~ 31 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR 31 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 4899999999999999999999999999887
No 357
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=95.89 E-value=0.05 Score=54.32 Aligned_cols=33 Identities=21% Similarity=0.452 Sum_probs=31.1
Q ss_pred CEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 192 KKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
-+|+|||+|.+|+-+|..+++.|.+|.++.+.+
T Consensus 8 ~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~ 40 (588)
T 2wdq_A 8 FDAVVIGAGGAGMRAALQISQSGQTCALLSKVF 40 (588)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEecCC
Confidence 379999999999999999999999999999986
No 358
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.87 E-value=0.0055 Score=46.68 Aligned_cols=35 Identities=23% Similarity=0.242 Sum_probs=31.5
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcC-CCEEEEecCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQG-VPFVMLERAE 54 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g-~~v~lie~~~ 54 (423)
++.+|+|+|+|..|..++..|.+.| .+|+++++++
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 3457999999999999999999999 8999999864
No 359
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=95.82 E-value=0.052 Score=54.43 Aligned_cols=33 Identities=24% Similarity=0.402 Sum_probs=31.1
Q ss_pred CEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 192 KKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
-+|+|||+|.+|+-+|..+++.|.+|.++.+.+
T Consensus 19 ~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~ 51 (621)
T 2h88_A 19 FDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLF 51 (621)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCEEEECccHHHHHHHHHHHHCCCcEEEEeccC
Confidence 379999999999999999999999999999976
No 360
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.73 E-value=0.013 Score=47.11 Aligned_cols=33 Identities=12% Similarity=0.192 Sum_probs=30.9
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERA 53 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~ 53 (423)
..+++|+|+|..|..+|..|.+.|.+|+++|++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 457999999999999999999999999999986
No 361
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=95.71 E-value=0.016 Score=57.87 Aligned_cols=33 Identities=21% Similarity=0.454 Sum_probs=31.0
Q ss_pred CEEEEECCCCCHHHHHHHHhcc------CCccEEEEecC
Q 014522 192 KKVLVVGCGNSGMELSLDLSNH------NASPSMVVRSS 224 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~~------g~~V~~v~r~~ 224 (423)
-+|+|||+|.+|+-+|..|++. |.+|+++.+.+
T Consensus 36 ~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~ 74 (584)
T 2gmh_A 36 ADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAA 74 (584)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCC
Confidence 4799999999999999999998 99999999986
No 362
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.61 E-value=0.0099 Score=46.80 Aligned_cols=33 Identities=24% Similarity=0.405 Sum_probs=30.4
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 22 NGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 22 ~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
.+|+|||+|..|..+|..|.+.|.+|+++|+++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 379999999999999999999999999999854
No 363
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=95.54 E-value=0.0095 Score=58.23 Aligned_cols=33 Identities=18% Similarity=0.376 Sum_probs=30.5
Q ss_pred CCEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 191 GKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 191 ~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
..+|+|||+|..|+.+|..|++. .+|+++.+.+
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~ 140 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERG 140 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTS
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCC
Confidence 34799999999999999999999 9999999887
No 364
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=95.54 E-value=0.01 Score=52.70 Aligned_cols=36 Identities=22% Similarity=0.391 Sum_probs=32.7
Q ss_pred CCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 189 YKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 189 ~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
..+++|+|||+|.+|...+..|.+.|++|+++....
T Consensus 11 l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 11 LKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp CTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred cCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 357899999999999999999999999999998654
No 365
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=95.46 E-value=0.066 Score=53.56 Aligned_cols=33 Identities=18% Similarity=0.445 Sum_probs=30.7
Q ss_pred CEEEEECCCCCHHHHHHHHhccC--CccEEEEecC
Q 014522 192 KKVLVVGCGNSGMELSLDLSNHN--ASPSMVVRSS 224 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~~g--~~V~~v~r~~ 224 (423)
-+|+|||+|.+|+-+|..|++.| .+|.++.+.+
T Consensus 6 ~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~ 40 (602)
T 1kf6_A 6 ADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVY 40 (602)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCC
Confidence 36999999999999999999999 9999999976
No 366
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=95.45 E-value=0.062 Score=52.52 Aligned_cols=34 Identities=15% Similarity=0.201 Sum_probs=30.1
Q ss_pred cCCeEEECCChHHHHHHHHHHHc--CCCEEEEecCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQ--GVPFVMLERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~--g~~v~lie~~~ 54 (423)
.++|+|||+|-+|+.++..|++. +.+|+++-+.+
T Consensus 246 gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~ 281 (501)
T 4b63_A 246 PYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDS 281 (501)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSS
T ss_pred CcEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCC
Confidence 46799999999999999999886 67999998875
No 367
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.45 E-value=0.016 Score=45.76 Aligned_cols=34 Identities=18% Similarity=0.216 Sum_probs=31.1
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
+.+|+|+|+|..|..+|..|.+.|.+|+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4579999999999999999999999999999853
No 368
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.43 E-value=0.0062 Score=53.80 Aligned_cols=32 Identities=16% Similarity=0.345 Sum_probs=30.7
Q ss_pred EEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 193 KVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 193 ~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
+|+|||+|++|+-+|..|++.|.+|+++.+++
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~ 35 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 59999999999999999999999999999876
No 369
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=95.10 E-value=0.099 Score=52.82 Aligned_cols=33 Identities=18% Similarity=0.268 Sum_probs=30.9
Q ss_pred CEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 192 KKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
-+|+|||+|.+|+-+|..+++.|.+|.++.+.+
T Consensus 6 ~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~ 38 (660)
T 2bs2_A 6 CDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIP 38 (660)
T ss_dssp CSEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred ccEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 379999999999999999999999999999876
No 370
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=95.08 E-value=0.0082 Score=60.71 Aligned_cols=33 Identities=30% Similarity=0.633 Sum_probs=31.3
Q ss_pred CEEEEECCCCCHHHHHHHHhc-cCCccEEEEecC
Q 014522 192 KKVLVVGCGNSGMELSLDLSN-HNASPSMVVRSS 224 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~-~g~~V~~v~r~~ 224 (423)
-+|+|||+|.+|+-+|..|++ .|.+|+++.+.+
T Consensus 33 ~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~ 66 (639)
T 2dkh_A 33 VDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKE 66 (639)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 479999999999999999999 999999999987
No 371
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.80 E-value=0.03 Score=46.47 Aligned_cols=34 Identities=26% Similarity=0.275 Sum_probs=31.3
Q ss_pred cCCeEEECCChHHHHHHHHHHHc-CCCEEEEecCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQ-GVPFVMLERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~-g~~v~lie~~~ 54 (423)
..+|+|||+|..|..+|..|.+. |++|+++|+++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 45799999999999999999999 99999999864
No 372
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.51 E-value=0.033 Score=47.76 Aligned_cols=32 Identities=13% Similarity=0.266 Sum_probs=30.4
Q ss_pred CeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 23 GPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 23 ~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
+|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 69999999999999999999999999999864
No 373
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=94.43 E-value=0.03 Score=50.74 Aligned_cols=34 Identities=24% Similarity=0.431 Sum_probs=31.4
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
+.+|.|||+|..|...|..|++.|++|+++|+++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 5679999999999999999999999999999864
No 374
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.38 E-value=0.044 Score=47.05 Aligned_cols=34 Identities=12% Similarity=0.224 Sum_probs=31.5
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
.++|+|||||..|...|..|.+.|.+|+|+++..
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~ 64 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTV 64 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 5789999999999999999999999999999753
No 375
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=94.35 E-value=0.048 Score=46.68 Aligned_cols=35 Identities=23% Similarity=0.168 Sum_probs=30.8
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
.+.+|.|||+|..|...|..|.+.|++|++++++.
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45689999999999999999999999999999864
No 376
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=94.31 E-value=0.037 Score=50.43 Aligned_cols=34 Identities=35% Similarity=0.381 Sum_probs=30.4
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
+.+|+|||+|..|.+.|..|.+.|.+|++++++.
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 2 SLRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp --CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 4589999999999999999999999999999864
No 377
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=94.27 E-value=0.06 Score=51.82 Aligned_cols=36 Identities=28% Similarity=0.305 Sum_probs=33.1
Q ss_pred CCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 189 YKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 189 ~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
..++++.|||.|.+|+-+|..|+++|.+|+...+++
T Consensus 7 ~~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 7 FENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 457899999999999999999999999999998865
No 378
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=94.21 E-value=0.015 Score=56.73 Aligned_cols=33 Identities=21% Similarity=0.400 Sum_probs=30.8
Q ss_pred CEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 192 KKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
|+|+|||+|..|+-+|..|++.|.+|+++.+++
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~ 34 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRD 34 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCC
Confidence 689999999999999999999999999999876
No 379
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=94.16 E-value=0.035 Score=50.78 Aligned_cols=34 Identities=21% Similarity=0.319 Sum_probs=30.8
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
+.+|+|||+|..|.+.|..|.+.|.+|+++++++
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 2 SLNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp -CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 3579999999999999999999999999999863
No 380
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=94.08 E-value=0.061 Score=49.12 Aligned_cols=35 Identities=20% Similarity=0.350 Sum_probs=29.8
Q ss_pred CCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 189 YKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 189 ~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
+...++.|||+|..|.-+|..|++.|.+|+++ +++
T Consensus 17 ~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp ---CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred ccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 45679999999999999999999999999998 655
No 381
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=94.07 E-value=0.044 Score=49.82 Aligned_cols=35 Identities=20% Similarity=0.243 Sum_probs=31.1
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
...+|.|||+|.-|...|..++..|++|+++|.++
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 35679999999999999999999999999999864
No 382
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=94.03 E-value=0.025 Score=53.05 Aligned_cols=32 Identities=25% Similarity=0.310 Sum_probs=30.7
Q ss_pred EEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 193 KVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 193 ~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
+|+|||+|++|+-+|..|++.|.+|+++.|.+
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~Er~~ 37 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRP 37 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 69999999999999999999999999999987
No 383
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=93.93 E-value=0.052 Score=50.58 Aligned_cols=36 Identities=17% Similarity=0.323 Sum_probs=32.7
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECI 56 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~ 56 (423)
|++|+|||||..|..++..+++.|++++++|.++..
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~~ 36 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQA 36 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCC
Confidence 578999999999999999999999999999987543
No 384
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=93.90 E-value=0.07 Score=48.76 Aligned_cols=33 Identities=30% Similarity=0.370 Sum_probs=30.8
Q ss_pred CEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 192 KKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
.++.|||+|..|.-+|..|++.|.+|+++.|++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 589999999999999999999999999999875
No 385
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=93.89 E-value=0.05 Score=49.11 Aligned_cols=34 Identities=21% Similarity=0.226 Sum_probs=31.0
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
+.+|+|||+|.-|.+.|..|.+.|.+|+++++..
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred CcEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 4589999999999999999999999999999874
No 386
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=93.89 E-value=0.047 Score=52.39 Aligned_cols=36 Identities=22% Similarity=0.321 Sum_probs=32.4
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAECI 56 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~~ 56 (423)
.++|+|||.|.+|+++|..|.++|++|+++|.....
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP 40 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSC
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCc
Confidence 357999999999999999999999999999987644
No 387
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=93.80 E-value=0.085 Score=48.00 Aligned_cols=33 Identities=18% Similarity=0.361 Sum_probs=30.1
Q ss_pred CEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 192 KKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
.++.|||+|..|.-+|..|++.|.+|+++.|++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 479999999999999999999999999998865
No 388
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=93.80 E-value=0.037 Score=53.35 Aligned_cols=32 Identities=22% Similarity=0.341 Sum_probs=30.5
Q ss_pred CeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 23 GPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 23 ~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
+|+|+|+|-.|..+|..|.+.|++|++||+++
T Consensus 5 ~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 5 KIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp EEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 69999999999999999999999999999874
No 389
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=93.74 E-value=0.027 Score=53.90 Aligned_cols=35 Identities=26% Similarity=0.484 Sum_probs=31.7
Q ss_pred CCCEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 190 KGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 190 ~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
..++|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 34689999999999999999999999999999886
No 390
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=93.66 E-value=0.058 Score=49.22 Aligned_cols=35 Identities=20% Similarity=0.243 Sum_probs=31.2
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
.+.+|.|||+|.-|...|..|++.|++|+++|+++
T Consensus 5 ~~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35689999999999999999999999999999864
No 391
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=93.62 E-value=0.051 Score=49.42 Aligned_cols=36 Identities=19% Similarity=0.188 Sum_probs=32.7
Q ss_pred cccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 19 IWVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 19 ~~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
..+.+|.|||.|..|...|..|.+.|++|+++|+++
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred ccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 345689999999999999999999999999999875
No 392
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=93.59 E-value=0.06 Score=51.88 Aligned_cols=36 Identities=17% Similarity=0.191 Sum_probs=32.4
Q ss_pred CCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 189 YKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 189 ~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
..+++++|||+|.+|...+..|.+.|++|+++....
T Consensus 10 l~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~ 45 (457)
T 1pjq_A 10 LRDRDCLIVGGGDVAERKARLLLEAGARLTVNALTF 45 (457)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCC
Confidence 457899999999999999999999999999997653
No 393
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=93.54 E-value=0.049 Score=43.83 Aligned_cols=36 Identities=25% Similarity=0.371 Sum_probs=33.1
Q ss_pred CCCCEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 189 YKGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 189 ~~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
..+++++|+|+|.+|..++..|...|.+|+++.|++
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 456799999999999999999999999999999987
No 394
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=93.49 E-value=0.053 Score=49.24 Aligned_cols=34 Identities=21% Similarity=0.279 Sum_probs=30.6
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
+.+|.|||+|..|...|..|.+.|++|+++++++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 3479999999999999999999999999999863
No 395
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=93.46 E-value=0.051 Score=52.34 Aligned_cols=34 Identities=21% Similarity=0.223 Sum_probs=31.6
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
.++|+|||.|.+|+++|..|.++|++|++.|.++
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 4689999999999999999999999999999864
No 396
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=93.39 E-value=0.039 Score=48.98 Aligned_cols=34 Identities=18% Similarity=0.290 Sum_probs=31.5
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
.+.|+|||||..|...+..|.+.|.+|+|+++..
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 5679999999999999999999999999999864
No 397
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=93.36 E-value=0.1 Score=47.76 Aligned_cols=34 Identities=18% Similarity=0.095 Sum_probs=30.9
Q ss_pred CCEEEEECCCCCHHH-HHHHHhccCCccEEEEecC
Q 014522 191 GKKVLVVGCGNSGME-LSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 191 ~~~v~ViG~G~~~~e-~a~~l~~~g~~V~~v~r~~ 224 (423)
.+++.|||.|-+|+. +|..|.++|.+|+...+++
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 578999999999997 8999999999999998875
No 398
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=93.32 E-value=0.066 Score=47.99 Aligned_cols=34 Identities=15% Similarity=0.193 Sum_probs=31.4
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
+.+|.|||+|.-|...|..|++.|++|+++|+++
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 4579999999999999999999999999999864
No 399
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=93.26 E-value=0.077 Score=50.83 Aligned_cols=36 Identities=33% Similarity=0.496 Sum_probs=32.8
Q ss_pred cccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 19 IWVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 19 ~~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
....+|.|||+|.-|...|..|++.|++|+++|+++
T Consensus 52 ~~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 87 (460)
T 3k6j_A 52 YDVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNE 87 (460)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcH
Confidence 345789999999999999999999999999999865
No 400
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=93.24 E-value=0.06 Score=51.26 Aligned_cols=36 Identities=17% Similarity=0.157 Sum_probs=32.8
Q ss_pred cccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 19 IWVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 19 ~~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
+.+.+|.|||.|..|+..|..|++.|++|+.+|-++
T Consensus 19 ~~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 19 SHMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 357789999999999999999999999999999763
No 401
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=93.17 E-value=0.065 Score=50.27 Aligned_cols=34 Identities=24% Similarity=0.306 Sum_probs=31.7
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
..+|+|||+|..|+.+|..|...|.+|+++|+.+
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4689999999999999999999999999999875
No 402
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=93.09 E-value=0.061 Score=48.03 Aligned_cols=35 Identities=17% Similarity=0.163 Sum_probs=31.8
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
|+++|+|.|||..|..++..|.+.|++|+++.+++
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 56689999999999999999999999999999875
No 403
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=93.01 E-value=0.1 Score=47.19 Aligned_cols=35 Identities=37% Similarity=0.505 Sum_probs=32.0
Q ss_pred ccCCeEEEC-CChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 20 WVNGPVIVG-AGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 20 ~~~~vvIIG-aG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
++.+|.||| +|..|.+.|..|.+.|++|+++++++
T Consensus 20 ~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 20 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 456899999 99999999999999999999999864
No 404
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=92.99 E-value=0.07 Score=51.25 Aligned_cols=33 Identities=24% Similarity=0.476 Sum_probs=30.9
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 22 NGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 22 ~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
.+|.|||+|..|+..|..|++.|++|+++|+++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 479999999999999999999999999999874
No 405
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=92.96 E-value=0.069 Score=46.86 Aligned_cols=34 Identities=29% Similarity=0.412 Sum_probs=31.2
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCC-CEEEEecCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGV-PFVMLERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~-~v~lie~~~ 54 (423)
..+|+|||+|..|..+|..|++.|. +++|+|++.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 5689999999999999999999997 899999864
No 406
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=92.93 E-value=0.067 Score=49.67 Aligned_cols=34 Identities=21% Similarity=0.342 Sum_probs=31.5
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCC-CEEEEecCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGV-PFVMLERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~-~v~lie~~~ 54 (423)
..+|+|+|||.+|+.+|..|...|. +|+++|++.
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 5689999999999999999999998 999999874
No 407
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=92.89 E-value=0.081 Score=47.75 Aligned_cols=35 Identities=11% Similarity=-0.011 Sum_probs=32.3
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAEC 55 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~ 55 (423)
..+|.|||.|..|...|..|.+.|++|+++|+++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 45899999999999999999999999999998763
No 408
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=92.81 E-value=0.11 Score=49.21 Aligned_cols=34 Identities=29% Similarity=0.356 Sum_probs=31.4
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
..+|+|||.|..|..+|..|.+.|++|++||.++
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 3479999999999999999999999999999874
No 409
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=92.78 E-value=0.06 Score=50.71 Aligned_cols=33 Identities=21% Similarity=0.370 Sum_probs=31.2
Q ss_pred CEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 192 KKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
-+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~ 37 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAERGHRVLVLERHT 37 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 379999999999999999999999999999986
No 410
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=92.72 E-value=0.053 Score=50.67 Aligned_cols=33 Identities=24% Similarity=0.301 Sum_probs=31.0
Q ss_pred CEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 192 KKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
++|+|||+|..|+++|..+++.|.+|.++.+++
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 479999999999999999999999999999876
No 411
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=92.64 E-value=0.079 Score=49.26 Aligned_cols=34 Identities=18% Similarity=0.288 Sum_probs=31.6
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
..+|+|||+|..|+.+|..|...|.+|+++|+.+
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999875
No 412
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=92.62 E-value=0.082 Score=42.37 Aligned_cols=34 Identities=12% Similarity=0.219 Sum_probs=31.6
Q ss_pred CCEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 191 GKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 191 ~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
.++++|+|+|.+|..++..|.+.|.+|+++.+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 5689999999999999999999999999999975
No 413
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=92.61 E-value=0.12 Score=47.99 Aligned_cols=34 Identities=26% Similarity=0.290 Sum_probs=31.5
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
..+|.|||+|..|.+.|..|++.|.+|+++++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4589999999999999999999999999999864
No 414
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=92.60 E-value=0.098 Score=47.63 Aligned_cols=35 Identities=26% Similarity=0.275 Sum_probs=31.8
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCC--CEEEEecCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGV--PFVMLERAE 54 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~--~v~lie~~~ 54 (423)
+..+|.|||.|..|.+.|..|.+.|+ +|+++|+++
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 45689999999999999999999998 999999864
No 415
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=92.57 E-value=0.13 Score=47.40 Aligned_cols=32 Identities=34% Similarity=0.339 Sum_probs=30.2
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecC
Q 014522 22 NGPVIVGAGPSGLATAACLRDQGVPFVMLERA 53 (423)
Q Consensus 22 ~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~ 53 (423)
.+|.|||+|..|.+.|..|.+.|.+|+++++.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 48999999999999999999999999999984
No 416
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=92.53 E-value=0.1 Score=44.36 Aligned_cols=35 Identities=17% Similarity=0.114 Sum_probs=31.3
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAEC 55 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~ 55 (423)
..+|.|||+|..|.+.|..|.+.|.+|+++++++.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 45799999999999999999999999999998753
No 417
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=92.52 E-value=0.093 Score=47.86 Aligned_cols=34 Identities=24% Similarity=0.384 Sum_probs=30.8
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCC--CEEEEecCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGV--PFVMLERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~--~v~lie~~~ 54 (423)
+.+|+|||+|..|..+|..|.+.|. +|+++|+++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4579999999999999999999998 999999853
No 418
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=92.42 E-value=0.11 Score=47.72 Aligned_cols=35 Identities=26% Similarity=0.316 Sum_probs=31.5
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCC-CEEEEecCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGV-PFVMLERAE 54 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~-~v~lie~~~ 54 (423)
+..+|.|||+|..|..+|..|+..|+ +|+++|.++
T Consensus 13 ~~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 13 MRKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 34589999999999999999999998 999999864
No 419
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=92.32 E-value=0.11 Score=46.59 Aligned_cols=33 Identities=24% Similarity=0.224 Sum_probs=31.0
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 22 NGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 22 ~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
.+|.|||.|..|...|..|.+.|++|+++|+++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 479999999999999999999999999999875
No 420
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=92.25 E-value=0.1 Score=48.44 Aligned_cols=34 Identities=29% Similarity=0.364 Sum_probs=31.4
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCC-CEEEEecC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGV-PFVMLERA 53 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~-~v~lie~~ 53 (423)
...+|+|+|||.+|..+|..|...|. +|+++|++
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 35689999999999999999999998 89999997
No 421
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=92.22 E-value=0.093 Score=45.03 Aligned_cols=34 Identities=26% Similarity=0.405 Sum_probs=30.8
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEE-EecCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVM-LERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~l-ie~~~ 54 (423)
+.+|.|||+|..|.+.|..|.+.|++|++ +++++
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 56899999999999999999999999998 77754
No 422
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=92.21 E-value=0.053 Score=50.50 Aligned_cols=33 Identities=12% Similarity=0.203 Sum_probs=31.0
Q ss_pred CEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 192 KKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
.+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~ 35 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHM 35 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 379999999999999999999999999999876
No 423
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=92.20 E-value=0.068 Score=50.03 Aligned_cols=33 Identities=27% Similarity=0.410 Sum_probs=31.0
Q ss_pred CEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 192 KKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
-+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~ 36 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFD 36 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 479999999999999999999999999999876
No 424
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=92.15 E-value=0.048 Score=43.28 Aligned_cols=34 Identities=18% Similarity=0.107 Sum_probs=30.8
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
..+|+|||+|..|...|..|.+.|.+|+++++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 5689999999999999999999998899999864
No 425
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=92.13 E-value=0.11 Score=47.53 Aligned_cols=34 Identities=18% Similarity=0.201 Sum_probs=30.6
Q ss_pred cCCeEEECCChHHHH-HHHHHHHcCCCEEEEecCC
Q 014522 21 VNGPVIVGAGPSGLA-TAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~-~A~~L~~~g~~v~lie~~~ 54 (423)
+++|.|||.|.+|++ +|..|.++|++|++.|...
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 567999999999997 7888999999999999865
No 426
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=92.12 E-value=0.12 Score=46.98 Aligned_cols=34 Identities=32% Similarity=0.396 Sum_probs=30.3
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCC-CEEEEecCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGV-PFVMLERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~-~v~lie~~~ 54 (423)
+.+|.|||+|..|..+|..|+..|. +++++|.++
T Consensus 2 ~~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 2 RKKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 3579999999999999999999996 899999754
No 427
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=92.05 E-value=0.067 Score=50.82 Aligned_cols=32 Identities=25% Similarity=0.355 Sum_probs=30.6
Q ss_pred EEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 193 KVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 193 ~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
+|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~ 33 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKAGHEVEVFERLP 33 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHHhCCCceEEEeCCC
Confidence 79999999999999999999999999999876
No 428
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=92.03 E-value=0.11 Score=47.18 Aligned_cols=33 Identities=24% Similarity=0.229 Sum_probs=30.1
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
+.+|+|||+|..|.+.|..|. .|.+|+++++.+
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 457999999999999999999 999999999864
No 429
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=92.01 E-value=0.12 Score=46.21 Aligned_cols=32 Identities=22% Similarity=0.193 Sum_probs=30.2
Q ss_pred CeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 23 GPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 23 ~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
+|.|||+|..|...|..|.+.|++|+++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 59999999999999999999999999999875
No 430
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=91.98 E-value=0.11 Score=40.98 Aligned_cols=35 Identities=23% Similarity=0.265 Sum_probs=32.6
Q ss_pred CCCEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 190 KGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 190 ~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
..++++|+|.|..|..++..|.+.|.+|+++.+++
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 35689999999999999999999999999999987
No 431
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=91.98 E-value=0.12 Score=47.22 Aligned_cols=35 Identities=20% Similarity=0.303 Sum_probs=31.5
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCC-CEEEEecCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGV-PFVMLERAE 54 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~-~v~lie~~~ 54 (423)
...+|+|||+|-.|..+|..|++.|. +++|+|.+.
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred hCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 36689999999999999999999997 899999863
No 432
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=91.96 E-value=0.14 Score=46.52 Aligned_cols=32 Identities=25% Similarity=0.340 Sum_probs=29.7
Q ss_pred CEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 192 KKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
.++.|||+|..|.-++..|+ .|.+|+++.|++
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 47999999999999999999 899999999876
No 433
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=91.92 E-value=0.084 Score=48.99 Aligned_cols=34 Identities=29% Similarity=0.445 Sum_probs=31.3
Q ss_pred CCEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 191 GKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 191 ~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
..+|+|||+|.+|+-+|..|++.|.+|+++.+..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 3589999999999999999999999999999864
No 434
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=91.89 E-value=0.12 Score=47.41 Aligned_cols=33 Identities=12% Similarity=0.171 Sum_probs=30.4
Q ss_pred CCeEEECCChHHHHHHHHHHHcCC-CEEEEecCC
Q 014522 22 NGPVIVGAGPSGLATAACLRDQGV-PFVMLERAE 54 (423)
Q Consensus 22 ~~vvIIGaG~aGl~~A~~L~~~g~-~v~lie~~~ 54 (423)
.+|+|||+|..|.++|..|+..|+ +|+++|.++
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 479999999999999999999998 999999864
No 435
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=91.84 E-value=0.092 Score=49.72 Aligned_cols=33 Identities=24% Similarity=0.437 Sum_probs=31.5
Q ss_pred CEEEEECCCCCHHHHHHHHhccCCc-cEEEEecC
Q 014522 192 KKVLVVGCGNSGMELSLDLSNHNAS-PSMVVRSS 224 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~~g~~-V~~v~r~~ 224 (423)
.+|+|||+|.+|+-+|..|++.|.+ |+++.+.+
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~ 38 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQAGIGKVTLLESSS 38 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 5899999999999999999999999 99999987
No 436
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=91.76 E-value=0.13 Score=47.29 Aligned_cols=35 Identities=23% Similarity=0.336 Sum_probs=31.6
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
|..+|.|||+|..|...|..|.+.|.+|+++++.+
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 56689999999999999999999999999999853
No 437
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=91.72 E-value=0.074 Score=49.82 Aligned_cols=33 Identities=24% Similarity=0.437 Sum_probs=30.9
Q ss_pred CEEEEECCCCCHHHHHHHHhcc--CCccEEEEecC
Q 014522 192 KKVLVVGCGNSGMELSLDLSNH--NASPSMVVRSS 224 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~~--g~~V~~v~r~~ 224 (423)
.+|+|||+|.+|+-+|..|++. |.+|+++.+.+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~ 35 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKND 35 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCC
Confidence 3799999999999999999999 99999999986
No 438
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=91.71 E-value=0.12 Score=48.40 Aligned_cols=36 Identities=19% Similarity=0.084 Sum_probs=32.4
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcC-------CCEEEEecCCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQG-------VPFVMLERAEC 55 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g-------~~v~lie~~~~ 55 (423)
++.+|.|||+|..|.+.|..|.+.| .+|+++++.+.
T Consensus 20 ~~~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 20 GPLKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp SCBCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 4568999999999999999999999 99999998754
No 439
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=91.71 E-value=0.13 Score=46.25 Aligned_cols=34 Identities=21% Similarity=0.253 Sum_probs=31.0
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
.+++|.|||+|.-|...|..|+ .|++|+++|+++
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 4678999999999999999999 999999999864
No 440
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=91.69 E-value=0.18 Score=46.26 Aligned_cols=37 Identities=24% Similarity=0.245 Sum_probs=30.9
Q ss_pred cccCCeEEECC-ChHHHHHHHHHHHcCCCEEEEecCCC
Q 014522 19 IWVNGPVIVGA-GPSGLATAACLRDQGVPFVMLERAEC 55 (423)
Q Consensus 19 ~~~~~vvIIGa-G~aGl~~A~~L~~~g~~v~lie~~~~ 55 (423)
...+.|+|.|| |..|..++..|.+.|++|+++++...
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 35678999999 99999999999999999999998753
No 441
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=91.68 E-value=0.11 Score=47.47 Aligned_cols=35 Identities=11% Similarity=0.145 Sum_probs=32.3
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcC-CCEEEEecCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQG-VPFVMLERAE 54 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g-~~v~lie~~~ 54 (423)
|+.+|.|||.|..|...|..|.+.| ++|+++|+++
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred cCCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 5568999999999999999999999 9999999874
No 442
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=91.63 E-value=0.079 Score=51.61 Aligned_cols=35 Identities=23% Similarity=0.396 Sum_probs=32.2
Q ss_pred CCCEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 190 KGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 190 ~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
...+|+|||+|.+|+.+|..|++.|.+|+++.+++
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~ 66 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASE 66 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCC
Confidence 35789999999999999999999999999998876
No 443
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=91.63 E-value=0.13 Score=46.07 Aligned_cols=34 Identities=26% Similarity=0.423 Sum_probs=31.1
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCC-CEEEEecCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGV-PFVMLERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~-~v~lie~~~ 54 (423)
..+|+|||+|-.|..+|..|++.|. +++|+|.+.
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 5689999999999999999999997 899999763
No 444
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=91.59 E-value=0.14 Score=46.71 Aligned_cols=34 Identities=21% Similarity=0.314 Sum_probs=30.9
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCC-CEEEEecCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGV-PFVMLERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~-~v~lie~~~ 54 (423)
..+|.|||+|..|.+.|..|++.|+ +|+++|.++
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 3479999999999999999999998 999999864
No 445
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=91.53 E-value=0.15 Score=46.81 Aligned_cols=33 Identities=21% Similarity=0.379 Sum_probs=30.3
Q ss_pred CEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 192 KKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
.++.|||+|..|.-+|..|++.|.+|+++.|+.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~~ 36 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARGA 36 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEEChH
Confidence 579999999999999999999999999998853
No 446
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=91.47 E-value=0.16 Score=44.37 Aligned_cols=35 Identities=23% Similarity=0.253 Sum_probs=31.7
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
...+|.|||+|..|.+.|..|.+.|++|+++++++
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 45689999999999999999999999999999864
No 447
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=91.42 E-value=0.095 Score=51.14 Aligned_cols=33 Identities=27% Similarity=0.374 Sum_probs=30.2
Q ss_pred CEEEEECCCCCHHHHHHHHhcc-CCccEEEEecC
Q 014522 192 KKVLVVGCGNSGMELSLDLSNH-NASPSMVVRSS 224 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~~-g~~V~~v~r~~ 224 (423)
-+|+|||+|.+|+-+|..|++. |.+|+++.+++
T Consensus 11 ~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~ 44 (513)
T 4gde_A 11 VDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNE 44 (513)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSS
T ss_pred CCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCC
Confidence 4799999999999999999975 99999999887
No 448
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=91.40 E-value=0.16 Score=44.86 Aligned_cols=34 Identities=35% Similarity=0.522 Sum_probs=31.5
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
.++++|||+|-+|.++|..|.+.|.+|++++|..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5689999999999999999999999999999874
No 449
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=91.39 E-value=0.24 Score=44.12 Aligned_cols=34 Identities=32% Similarity=0.411 Sum_probs=31.4
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
+++|+|.|+|..|..++..|.+.|++|+++++..
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 3579999999999999999999999999999875
No 450
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=91.35 E-value=0.23 Score=44.93 Aligned_cols=35 Identities=23% Similarity=0.347 Sum_probs=32.1
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
++.+|.|||.|..|...|..|.+.|++|+++|+++
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35689999999999999999999999999999864
No 451
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=91.32 E-value=0.15 Score=46.02 Aligned_cols=35 Identities=20% Similarity=0.094 Sum_probs=31.5
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
+..+|.|||.|..|...|..|.+.|++|+++|+++
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 34579999999999999999999999999999864
No 452
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=91.31 E-value=0.16 Score=45.43 Aligned_cols=35 Identities=23% Similarity=0.249 Sum_probs=31.7
Q ss_pred ccCCeEEECC-ChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 20 WVNGPVIVGA-GPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 20 ~~~~vvIIGa-G~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
|+.+|.|||+ |..|...|..|.+.|++|+++++++
T Consensus 10 mmm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 10 GPKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred cCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3468999999 9999999999999999999999864
No 453
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=91.30 E-value=0.21 Score=43.61 Aligned_cols=34 Identities=12% Similarity=0.237 Sum_probs=31.1
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCC----CEEEEecCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGV----PFVMLERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~----~v~lie~~~ 54 (423)
+.+|.|||+|..|.+.|..|.+.|+ +|+++|+++
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 4589999999999999999999998 999999864
No 454
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=91.26 E-value=0.14 Score=44.89 Aligned_cols=34 Identities=26% Similarity=0.437 Sum_probs=31.0
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCC-CEEEEecCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGV-PFVMLERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~-~v~lie~~~ 54 (423)
..+|+|||+|-.|..+|..|++.|. +++|+|.+.
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 5689999999999999999999997 889999863
No 455
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=91.26 E-value=0.15 Score=48.18 Aligned_cols=34 Identities=21% Similarity=0.339 Sum_probs=31.2
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
..+|+|||+|..|+.+|..+...|.+|+++|+.+
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4679999999999999999999999999999864
No 456
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=91.26 E-value=0.14 Score=49.31 Aligned_cols=35 Identities=17% Similarity=0.276 Sum_probs=32.4
Q ss_pred cCCeEEECCChHHHHHHHHHHHc-CC-CEEEEecCCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQ-GV-PFVMLERAEC 55 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~-g~-~v~lie~~~~ 55 (423)
+.+|.|||+|..|+..|..|++. |+ +|+++|+++.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 45799999999999999999999 99 9999998764
No 457
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=91.26 E-value=0.15 Score=49.38 Aligned_cols=34 Identities=35% Similarity=0.577 Sum_probs=31.1
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
..+|.|||+|..|+..|..|++.|++|+++|+++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3479999999999999999999999999999863
No 458
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=91.22 E-value=0.23 Score=45.15 Aligned_cols=33 Identities=18% Similarity=0.223 Sum_probs=30.9
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 22 NGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 22 ~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
.+|.|||+|..|...|..|.+.|++|+++|+++
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 689999999999999999999999999999864
No 459
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=91.18 E-value=0.16 Score=47.74 Aligned_cols=35 Identities=17% Similarity=0.231 Sum_probs=31.6
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
...+|+|||+|..|+.++..+...|.+|+++|+.+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35689999999999999999999999999999864
No 460
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=91.13 E-value=0.18 Score=47.38 Aligned_cols=36 Identities=19% Similarity=0.237 Sum_probs=32.3
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAEC 55 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~ 55 (423)
..++|+|||+|..|..++..+.+.|++++++|..+.
T Consensus 13 ~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 13 PGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKN 48 (389)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 356799999999999999999999999999997653
No 461
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=91.11 E-value=0.11 Score=49.70 Aligned_cols=34 Identities=21% Similarity=0.365 Sum_probs=31.7
Q ss_pred CCEEEEECCCCCHHHHHHHHhccCC-ccEEEEecC
Q 014522 191 GKKVLVVGCGNSGMELSLDLSNHNA-SPSMVVRSS 224 (423)
Q Consensus 191 ~~~v~ViG~G~~~~e~a~~l~~~g~-~V~~v~r~~ 224 (423)
..+|+|||+|..|+-+|..|++.|. +|+++.+.+
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~ 40 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYP 40 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 3579999999999999999999999 999999987
No 462
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=91.07 E-value=0.11 Score=40.85 Aligned_cols=34 Identities=21% Similarity=0.289 Sum_probs=31.7
Q ss_pred CCEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 191 GKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 191 ~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
.++++|+|+|..|..++..|.+.|.+|+++.+++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4689999999999999999999999999999876
No 463
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=91.04 E-value=0.1 Score=50.46 Aligned_cols=33 Identities=33% Similarity=0.442 Sum_probs=31.0
Q ss_pred CEEEEECCCCCHHHHHHHHhccCC--ccEEEEecC
Q 014522 192 KKVLVVGCGNSGMELSLDLSNHNA--SPSMVVRSS 224 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~~g~--~V~~v~r~~ 224 (423)
++|+|||+|.+|+-+|..|++.|. +|+++.+++
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~ 37 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSE 37 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCC
Confidence 589999999999999999999999 999999865
No 464
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=91.03 E-value=0.17 Score=47.10 Aligned_cols=34 Identities=21% Similarity=0.255 Sum_probs=31.1
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
..+|+|+|+|.+|..++..|...|.+|+++|+++
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3689999999999999999999999999999864
No 465
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=91.01 E-value=0.17 Score=46.90 Aligned_cols=33 Identities=24% Similarity=0.297 Sum_probs=30.5
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 22 NGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 22 ~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
.+|.|||+|..|...|..|.+.|.+|+++++++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 479999999999999999999999999999853
No 466
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=91.00 E-value=0.17 Score=45.80 Aligned_cols=32 Identities=31% Similarity=0.427 Sum_probs=29.6
Q ss_pred CeEEECCChHHHHHHHHHHHcCC--CEEEEecCC
Q 014522 23 GPVIVGAGPSGLATAACLRDQGV--PFVMLERAE 54 (423)
Q Consensus 23 ~vvIIGaG~aGl~~A~~L~~~g~--~v~lie~~~ 54 (423)
+|+|||+|..|.++|..|+..|+ +++++|.++
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 69999999999999999999998 899999863
No 467
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=91.00 E-value=0.16 Score=46.42 Aligned_cols=35 Identities=23% Similarity=0.415 Sum_probs=31.9
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
.+.+|.|||.|..|...|..|.+.|++|+++|+++
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 34589999999999999999999999999999864
No 468
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=90.94 E-value=0.12 Score=46.61 Aligned_cols=37 Identities=22% Similarity=0.312 Sum_probs=29.5
Q ss_pred cccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCC
Q 014522 19 IWVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAEC 55 (423)
Q Consensus 19 ~~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~ 55 (423)
.|..+|-+||-|..|...|..|.+.|++|+++|+++.
T Consensus 3 ~Ms~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 3 AMSEKIAFLGLGNLGTPIAEILLEAGYELVVWNRTAS 39 (297)
T ss_dssp -CCCEEEEECCSTTHHHHHHHHHHTTCEEEEC-----
T ss_pred CCCCcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 3566899999999999999999999999999998753
No 469
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=90.92 E-value=0.099 Score=48.67 Aligned_cols=34 Identities=24% Similarity=0.298 Sum_probs=30.9
Q ss_pred CCCEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 190 KGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 190 ~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
..++|+|||+|.+|+-+|..|+ .|.+|+++.+.+
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~ 41 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLS-AHGRVVVLEREA 41 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSS
T ss_pred CcCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCC
Confidence 3578999999999999999999 599999999985
No 470
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=90.79 E-value=0.13 Score=40.15 Aligned_cols=33 Identities=18% Similarity=0.327 Sum_probs=30.6
Q ss_pred CEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 192 KKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
.+++|+|+|..|..++..|.+.|.+|+++.|++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 589999999999999999999999999998876
No 471
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=90.78 E-value=0.16 Score=45.80 Aligned_cols=34 Identities=18% Similarity=0.294 Sum_probs=31.3
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
+.+|.|||+|..|...|..|.+.|++|+++|+++
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 4579999999999999999999999999999864
No 472
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=90.75 E-value=0.1 Score=48.13 Aligned_cols=32 Identities=19% Similarity=0.325 Sum_probs=30.1
Q ss_pred EEEEECCCCCHHHHHHHHhccC------CccEEEEecC
Q 014522 193 KVLVVGCGNSGMELSLDLSNHN------ASPSMVVRSS 224 (423)
Q Consensus 193 ~v~ViG~G~~~~e~a~~l~~~g------~~V~~v~r~~ 224 (423)
+|+|||+|.+|+-+|..|++.| .+|+++.+..
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 7999999999999999999998 8999999875
No 473
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=90.72 E-value=0.12 Score=49.03 Aligned_cols=34 Identities=15% Similarity=0.444 Sum_probs=31.6
Q ss_pred CCEEEEECCCCCHHHHHHHHhccC-CccEEEEecC
Q 014522 191 GKKVLVVGCGNSGMELSLDLSNHN-ASPSMVVRSS 224 (423)
Q Consensus 191 ~~~v~ViG~G~~~~e~a~~l~~~g-~~V~~v~r~~ 224 (423)
..+|+|||+|.+|+-+|..|++.| .+|+++.+++
T Consensus 6 ~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~ 40 (424)
T 2b9w_A 6 DSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTD 40 (424)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCC
Confidence 468999999999999999999999 8999999876
No 474
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=90.67 E-value=0.13 Score=48.06 Aligned_cols=34 Identities=21% Similarity=0.349 Sum_probs=32.0
Q ss_pred CCCEEEEECCCCCHHHHHHHHhccCCccEEEEec
Q 014522 190 KGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRS 223 (423)
Q Consensus 190 ~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~ 223 (423)
...+|+|||+|.+|+-+|..|.+.|.+|+++.++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~ 76 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEAN 76 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEecc
Confidence 4579999999999999999999999999999988
No 475
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=90.64 E-value=0.24 Score=42.21 Aligned_cols=35 Identities=20% Similarity=0.137 Sum_probs=30.6
Q ss_pred ccCCeEEECC-ChHHHHHHHHHH-HcCCCEEEEecCC
Q 014522 20 WVNGPVIVGA-GPSGLATAACLR-DQGVPFVMLERAE 54 (423)
Q Consensus 20 ~~~~vvIIGa-G~aGl~~A~~L~-~~g~~v~lie~~~ 54 (423)
|++.|+|.|| |..|..++..|. +.|++|+++++++
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSH
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCc
Confidence 4455999996 999999999999 8999999999864
No 476
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=90.64 E-value=0.11 Score=39.05 Aligned_cols=34 Identities=21% Similarity=0.222 Sum_probs=31.1
Q ss_pred CCEEEEECCCCCHHHHHHHHhccC-CccEEEEecC
Q 014522 191 GKKVLVVGCGNSGMELSLDLSNHN-ASPSMVVRSS 224 (423)
Q Consensus 191 ~~~v~ViG~G~~~~e~a~~l~~~g-~~V~~v~r~~ 224 (423)
.++++|+|+|.+|..++..|.+.| .+|+++.|++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 468999999999999999999999 8899998876
No 477
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=90.63 E-value=0.19 Score=45.03 Aligned_cols=33 Identities=24% Similarity=0.290 Sum_probs=30.8
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 22 NGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 22 ~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
.+|.|||.|..|...|..|.+.|++|+++|+++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 369999999999999999999999999999875
No 478
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=90.58 E-value=0.17 Score=45.90 Aligned_cols=33 Identities=24% Similarity=0.299 Sum_probs=30.4
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCC-CEEEEecC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGV-PFVMLERA 53 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~-~v~lie~~ 53 (423)
+.+|.|||.|..|...|..|.+.|+ +|+++|++
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 4689999999999999999999999 99999985
No 479
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=90.49 E-value=0.16 Score=49.23 Aligned_cols=35 Identities=17% Similarity=0.347 Sum_probs=31.8
Q ss_pred CCCEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 190 KGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 190 ~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
...+|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~ 44 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEART 44 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccC
Confidence 35689999999999999999999999999998775
No 480
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=90.46 E-value=0.31 Score=44.76 Aligned_cols=35 Identities=17% Similarity=0.112 Sum_probs=32.1
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
...+|.|||.|..|-+.|..|.+.|++|+++|+++
T Consensus 7 ~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 7 ISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45689999999999999999999999999999864
No 481
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=90.44 E-value=0.22 Score=45.46 Aligned_cols=34 Identities=21% Similarity=0.313 Sum_probs=30.6
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCC-CEEEEecCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGV-PFVMLERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~-~v~lie~~~ 54 (423)
+.+|.|||+|..|..+|..|+..|+ +++++|.++
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 3479999999999999999999998 899999764
No 482
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=90.41 E-value=0.19 Score=48.00 Aligned_cols=35 Identities=26% Similarity=0.482 Sum_probs=32.1
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAEC 55 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~ 55 (423)
.-++.|||.|..|+..|..|++.|++|+++|+++.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 34799999999999999999999999999998764
No 483
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=90.33 E-value=0.22 Score=44.26 Aligned_cols=34 Identities=15% Similarity=0.128 Sum_probs=30.8
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
.+.++|+|+|-.|.++|..|.+.|.+|++++++.
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 4579999999999999999999999999998863
No 484
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=90.30 E-value=0.25 Score=43.91 Aligned_cols=34 Identities=21% Similarity=0.124 Sum_probs=31.3
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCC-CEEEEecCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGV-PFVMLERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~-~v~lie~~~ 54 (423)
.++++|||+|-+|.++|..|.+.|. +|++++|..
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 5689999999999999999999998 999999874
No 485
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=90.29 E-value=0.1 Score=45.13 Aligned_cols=34 Identities=32% Similarity=0.301 Sum_probs=29.8
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
...+++|+|+|..|..+|..|.+.|. |+++|+++
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 35579999999999999999999999 99999864
No 486
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=90.24 E-value=0.24 Score=45.14 Aligned_cols=34 Identities=24% Similarity=0.257 Sum_probs=31.0
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCC-CEEEEecCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGV-PFVMLERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~-~v~lie~~~ 54 (423)
+.+|.|||+|..|.++|..|...|+ +++++|..+
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 4589999999999999999999998 999999864
No 487
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=90.16 E-value=0.27 Score=44.74 Aligned_cols=34 Identities=21% Similarity=0.291 Sum_probs=30.3
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCC--CEEEEecCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGV--PFVMLERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~--~v~lie~~~ 54 (423)
+.+|+|||+|..|.++|..|...+. ++.++|.+.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4589999999999999999999987 899999764
No 488
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=90.16 E-value=0.31 Score=47.32 Aligned_cols=35 Identities=14% Similarity=0.165 Sum_probs=32.6
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
|..+|.|||.|..|...|..|.+.|++|+++++.+
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 56789999999999999999999999999999865
No 489
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=90.14 E-value=0.21 Score=45.07 Aligned_cols=34 Identities=32% Similarity=0.611 Sum_probs=30.3
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCC--CEEEEecCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGV--PFVMLERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~--~v~lie~~~ 54 (423)
+.+|.|||+|..|..+|..|...|+ ++.|+|.++
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 5689999999999999999999998 899999864
No 490
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=90.13 E-value=0.2 Score=48.35 Aligned_cols=34 Identities=24% Similarity=0.375 Sum_probs=31.3
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
..+|.|||+|..|...|..|++.|++|+++|+++
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4579999999999999999999999999999864
No 491
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=90.13 E-value=0.25 Score=46.13 Aligned_cols=36 Identities=25% Similarity=0.317 Sum_probs=32.4
Q ss_pred ccCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCC
Q 014522 20 WVNGPVIVGAGPSGLATAACLRDQGVPFVMLERAEC 55 (423)
Q Consensus 20 ~~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~~ 55 (423)
..+.|+|||+|..|..++..+.+.|++++++|..+.
T Consensus 11 ~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 11 FGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 356799999999999999999999999999998654
No 492
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=90.11 E-value=0.13 Score=48.61 Aligned_cols=33 Identities=21% Similarity=0.321 Sum_probs=30.9
Q ss_pred CEEEEECCCCCHHHHHHHHhcc--CCccEEEEecC
Q 014522 192 KKVLVVGCGNSGMELSLDLSNH--NASPSMVVRSS 224 (423)
Q Consensus 192 ~~v~ViG~G~~~~e~a~~l~~~--g~~V~~v~r~~ 224 (423)
.+|+|||+|.+|+-+|..|++. |.+|+++.+..
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~ 71 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGG 71 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 4799999999999999999999 99999999865
No 493
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=90.11 E-value=0.25 Score=44.12 Aligned_cols=32 Identities=22% Similarity=0.351 Sum_probs=29.5
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 22 NGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 22 ~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
.+|.|||+|..|...|..|.+ |++|+++++++
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 479999999999999999999 99999999864
No 494
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=90.09 E-value=0.2 Score=47.57 Aligned_cols=33 Identities=21% Similarity=0.285 Sum_probs=30.1
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
+.+|.|||+|..|+..|..|++ |++|+++|+++
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 4579999999999999999998 99999999864
No 495
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=90.09 E-value=0.21 Score=45.29 Aligned_cols=33 Identities=33% Similarity=0.438 Sum_probs=29.8
Q ss_pred CCeEEECCChHHHHHHHHHHHcC--CCEEEEecCC
Q 014522 22 NGPVIVGAGPSGLATAACLRDQG--VPFVMLERAE 54 (423)
Q Consensus 22 ~~vvIIGaG~aGl~~A~~L~~~g--~~v~lie~~~ 54 (423)
.+|.|||+|..|.++|..|.+.| .+|+++|++.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 47999999999999999999999 6899999853
No 496
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=90.07 E-value=0.16 Score=39.77 Aligned_cols=35 Identities=23% Similarity=0.247 Sum_probs=31.3
Q ss_pred CCCEEEEECCCCCHHHHHHHHhccCCccEEEEecC
Q 014522 190 KGKKVLVVGCGNSGMELSLDLSNHNASPSMVVRSS 224 (423)
Q Consensus 190 ~~~~v~ViG~G~~~~e~a~~l~~~g~~V~~v~r~~ 224 (423)
..++++|+|+|..|..++..|.+.|.+|+++.+++
T Consensus 5 ~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 5 KNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred cCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35689999999999999999999999999998875
No 497
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=90.04 E-value=0.2 Score=45.11 Aligned_cols=33 Identities=21% Similarity=0.267 Sum_probs=30.4
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 22 NGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 22 ~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
.+|.|||+|..|...|..|.+.|++|+++|+++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 479999999999999999999999999999864
No 498
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=90.04 E-value=0.31 Score=47.13 Aligned_cols=34 Identities=18% Similarity=0.380 Sum_probs=31.5
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGVPFVMLERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~~v~lie~~~ 54 (423)
..+|.|||+|.-|...|..|++.|++|+++|+++
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4589999999999999999999999999999864
No 499
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=90.02 E-value=0.22 Score=46.07 Aligned_cols=34 Identities=21% Similarity=0.431 Sum_probs=31.1
Q ss_pred cCCeEEECCChHHHHHHHHHHHcCC-CEEEEecCC
Q 014522 21 VNGPVIVGAGPSGLATAACLRDQGV-PFVMLERAE 54 (423)
Q Consensus 21 ~~~vvIIGaG~aGl~~A~~L~~~g~-~v~lie~~~ 54 (423)
..+|+|||+|..|..+|..|++.|. +++|+|.+.
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 6689999999999999999999997 899999863
No 500
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=89.99 E-value=0.34 Score=42.42 Aligned_cols=32 Identities=31% Similarity=0.377 Sum_probs=30.1
Q ss_pred CeEEECCChHHHHHHHHHHHcCC-CEEEEecCC
Q 014522 23 GPVIVGAGPSGLATAACLRDQGV-PFVMLERAE 54 (423)
Q Consensus 23 ~vvIIGaG~aGl~~A~~L~~~g~-~v~lie~~~ 54 (423)
+++|||+|-+|.+++..|.+.|. +|++++|..
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 89999999999999999999998 999999864
Done!