Your job contains 1 sequence.
>014525
MATAMVEDPNLEDDQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFKEKIKENQ
EKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV
VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ
ELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL
VQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ
LDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVH
PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLN
YYA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 014525
(423 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2079742 - symbol:RPT5A "regulatory particle tr... 1951 1.3e-201 1
TAIR|locus:2036099 - symbol:RPT5B "26S proteasome AAA-ATP... 1924 9.7e-199 1
ZFIN|ZDB-GENE-030131-666 - symbol:psmc3 "proteasome (pros... 1609 2.3e-165 1
UNIPROTKB|F1SID4 - symbol:PSMC3 "Uncharacterized protein"... 1604 7.9e-165 1
MGI|MGI:1098754 - symbol:Psmc3 "proteasome (prosome, macr... 1604 7.9e-165 1
RGD|61905 - symbol:Psmc3 "proteasome (prosome, macropain)... 1604 7.9e-165 1
UNIPROTKB|Q6P6U2 - symbol:Psmc3 "26S protease regulatory ... 1604 7.9e-165 1
UNIPROTKB|F1PBK7 - symbol:PSMC3 "Uncharacterized protein"... 1603 1.0e-164 1
UNIPROTKB|P17980 - symbol:PSMC3 "26S protease regulatory ... 1603 1.0e-164 1
UNIPROTKB|O42586 - symbol:psmc3-b "26S protease regulator... 1590 2.4e-163 1
UNIPROTKB|J9NWA6 - symbol:LOC100687152 "Uncharacterized p... 1584 1.0e-162 1
UNIPROTKB|F1MWE0 - symbol:PSMC3 "Uncharacterized protein"... 1564 1.4e-160 1
WB|WBGene00004505 - symbol:rpt-5 species:6239 "Caenorhabd... 1560 3.6e-160 1
UNIPROTKB|O76371 - symbol:rpt-5 "Protein RPT-5" species:6... 1560 3.6e-160 1
UNIPROTKB|E9PM69 - symbol:PSMC3 "26S protease regulatory ... 1502 1.3e-158 2
FB|FBgn0028684 - symbol:Rpt5 "Regulatory particle triple-... 1530 5.5e-157 1
ASPGD|ASPL0000010049 - symbol:AN4236 species:162425 "Emer... 1488 1.5e-152 1
GENEDB_PFALCIPARUM|PF11_0314 - symbol:PF11_0314 "26S prot... 1485 3.2e-152 1
UNIPROTKB|Q8II60 - symbol:PF11_0314 "26S protease subunit... 1485 3.2e-152 1
DICTYBASE|DDB_G0284415 - symbol:psmC3 "26S proteasome ATP... 1476 2.9e-151 1
CGD|CAL0002261 - symbol:RPT5 species:5476 "Candida albica... 1467 2.6e-150 1
SGD|S000005643 - symbol:RPT5 "ATPase of the 19S regulator... 1453 7.9e-149 1
POMBASE|SPAC3A11.12c - symbol:rpt5 "19S proteasome regula... 1439 2.4e-147 1
UNIPROTKB|O42587 - symbol:psmc3-a "26S protease regulator... 1430 2.2e-146 1
UNIPROTKB|F1P3L9 - symbol:PSMC3 "Uncharacterized protein"... 1405 9.6e-144 1
UNIPROTKB|F1NDQ1 - symbol:PSMC3 "Uncharacterized protein"... 1396 8.6e-143 1
UNIPROTKB|E9PKD5 - symbol:PSMC3 "26S protease regulatory ... 680 2.6e-113 2
UNIPROTKB|E9PMD8 - symbol:PSMC3 "26S protease regulatory ... 996 2.1e-100 1
UNIPROTKB|Q58576 - symbol:pan "Proteasome-activating nucl... 897 1.1e-93 2
UNIPROTKB|E9PN50 - symbol:PSMC3 "26S protease regulatory ... 661 5.0e-89 2
UNIPROTKB|F1NSP7 - symbol:PSMC1 "26S protease regulatory ... 853 3.0e-85 1
UNIPROTKB|F1NTZ4 - symbol:PSMC1 "26S protease regulatory ... 853 3.0e-85 1
TAIR|locus:2119926 - symbol:RPT2a "regulatory particle AA... 852 3.8e-85 1
FB|FBgn0015282 - symbol:Rpt2 "Regulatory particle triple-... 851 4.9e-85 1
UNIPROTKB|A4FUZ3 - symbol:PSMC1 "Proteasome (Prosome, mac... 850 6.2e-85 1
UNIPROTKB|F1PQ40 - symbol:PSMC1 "Uncharacterized protein"... 850 6.2e-85 1
UNIPROTKB|B4DR63 - symbol:PSMC1 "cDNA FLJ58247, highly si... 850 6.2e-85 1
UNIPROTKB|P62191 - symbol:PSMC1 "26S protease regulatory ... 850 6.2e-85 1
UNIPROTKB|F2Z5J1 - symbol:PSMC1 "Uncharacterized protein"... 850 6.2e-85 1
MGI|MGI:106054 - symbol:Psmc1 "protease (prosome, macropa... 850 6.2e-85 1
RGD|621097 - symbol:Psmc1 "proteasome (prosome, macropain... 850 6.2e-85 1
TAIR|locus:2061639 - symbol:RPT2b "regulatory particle AA... 850 6.2e-85 1
ZFIN|ZDB-GENE-040625-69 - symbol:psmc1b "proteasome (pros... 845 2.1e-84 1
DICTYBASE|DDB_G0270784 - symbol:psmC1 "TAT binding protei... 844 2.7e-84 1
UNIPROTKB|Q90732 - symbol:PSMC1 "26S protease regulatory ... 844 2.7e-84 1
ZFIN|ZDB-GENE-030131-8730 - symbol:psmc1a "proteasome (pr... 844 2.7e-84 1
GENEDB_PFALCIPARUM|PF10_0081 - symbol:PF10_0081 "26S prot... 839 9.1e-84 1
UNIPROTKB|Q8IJW0 - symbol:PF10_0081 "26S proteasome regul... 839 9.1e-84 1
WB|WBGene00004502 - symbol:rpt-2 species:6239 "Caenorhabd... 837 1.5e-83 1
TAIR|locus:2147685 - symbol:AT5G20000 species:3702 "Arabi... 796 1.9e-81 2
WB|WBGene00004506 - symbol:rpt-6 species:6239 "Caenorhabd... 791 2.5e-81 2
TAIR|locus:2147670 - symbol:RPT6A "regulatory particle tr... 794 3.2e-81 2
SGD|S000002165 - symbol:RPT2 "ATPase of the 19S regulator... 812 6.6e-81 1
DICTYBASE|DDB_G0289003 - symbol:psmC4 "HIV TAT binding-pr... 789 2.2e-80 2
WB|WBGene00018991 - symbol:F56F11.4 species:6239 "Caenorh... 788 2.8e-80 2
DICTYBASE|DDB_G0292382 - symbol:psmC5 "HIV TAT binding-pr... 776 3.6e-80 2
UNIPROTKB|F1NU79 - symbol:PSMC5 "Uncharacterized protein"... 785 4.6e-80 2
UNIPROTKB|P62194 - symbol:PSMC5 "26S protease regulatory ... 785 4.6e-80 2
UNIPROTKB|P62195 - symbol:PSMC5 "26S protease regulatory ... 785 4.6e-80 2
UNIPROTKB|P62197 - symbol:PSMC5 "26S protease regulatory ... 785 4.6e-80 2
UNIPROTKB|Q4RG45 - symbol:GSTENG00035021001 "Chromosome 2... 785 4.6e-80 2
UNIPROTKB|Q6AZU7 - symbol:Q6AZU7 "Putative uncharacterize... 785 4.6e-80 2
MGI|MGI:105047 - symbol:Psmc5 "protease (prosome, macropa... 785 4.6e-80 2
RGD|708376 - symbol:Psmc5 "proteasome (prosome, macropain... 785 4.6e-80 2
ZFIN|ZDB-GENE-030131-6547 - symbol:psmc5 "proteasome (pro... 785 4.6e-80 2
FB|FBgn0020369 - symbol:Rpt6 "Regulatory particle triple-... 784 5.8e-80 2
UNIPROTKB|Q6P380 - symbol:psmc5 "Putative uncharacterized... 784 5.8e-80 2
CGD|CAL0005257 - symbol:RPT2 species:5476 "Candida albica... 802 7.6e-80 1
POMBASE|SPBC4.07c - symbol:rpt2 "19S proteasome regulator... 802 7.6e-80 1
UNIPROTKB|P46470 - symbol:psmc5 "26S protease regulatory ... 778 2.5e-79 2
ASPGD|ASPL0000049719 - symbol:AN2213 species:162425 "Emer... 794 5.4e-79 1
WB|WBGene00004503 - symbol:rpt-3 species:6239 "Caenorhabd... 774 8.4e-79 2
TAIR|locus:2024822 - symbol:RPT1A "regulatory particle tr... 792 8.7e-79 1
CGD|CAL0006022 - symbol:RPT6 species:5476 "Candida albica... 770 1.1e-78 2
POMBASE|SPBC23G7.12c - symbol:rpt6 "19S proteasome regula... 789 1.8e-78 1
TAIR|locus:2161258 - symbol:RPT3 "regulatory particle tri... 763 3.6e-78 2
FB|FBgn0037742 - symbol:Rpt3R "Regulatory particle triple... 786 3.8e-78 1
FB|FBgn0039788 - symbol:Rpt6R "Regulatory particle triple... 767 4.6e-78 2
ASPGD|ASPL0000064945 - symbol:AN6988 species:162425 "Emer... 778 2.7e-77 1
UNIPROTKB|Q5R8D7 - symbol:PSMC2 "26S protease regulatory ... 777 3.4e-77 1
FB|FBgn0028686 - symbol:Rpt3 "Regulatory particle triple-... 776 4.3e-77 1
DICTYBASE|DDB_G0276917 - symbol:psmC2 "26S proteasome ATP... 775 5.5e-77 1
UNIPROTKB|F1MG70 - symbol:PSMC4 "26S protease regulatory ... 756 6.6e-77 2
UNIPROTKB|Q3T030 - symbol:PSMC4 "26S protease regulatory ... 756 6.6e-77 2
UNIPROTKB|E2RH48 - symbol:PSMC4 "Uncharacterized protein"... 756 6.6e-77 2
UNIPROTKB|P43686 - symbol:PSMC4 "26S protease regulatory ... 756 6.6e-77 2
UNIPROTKB|Q4R7L3 - symbol:PSMC4 "26S protease regulatory ... 756 6.6e-77 2
MGI|MGI:1346093 - symbol:Psmc4 "proteasome (prosome, macr... 756 6.6e-77 2
RGD|621102 - symbol:Psmc4 "proteasome (prosome, macropain... 756 6.6e-77 2
UNIPROTKB|P46472 - symbol:psmc2 "26S protease regulatory ... 774 7.1e-77 1
UNIPROTKB|E1C4V5 - symbol:PSMC2 "Uncharacterized protein"... 773 9.0e-77 1
UNIPROTKB|F1NFL8 - symbol:PSMC2 "Uncharacterized protein"... 773 9.0e-77 1
UNIPROTKB|Q5E9F9 - symbol:PSMC2 "26S protease regulatory ... 773 9.0e-77 1
UNIPROTKB|F1PPH7 - symbol:PSMC2 "Uncharacterized protein"... 773 9.0e-77 1
UNIPROTKB|P35998 - symbol:PSMC2 "26S protease regulatory ... 773 9.0e-77 1
UNIPROTKB|F1SB53 - symbol:PSMC2 "Uncharacterized protein"... 773 9.0e-77 1
UNIPROTKB|I3LJ30 - symbol:I3LJ30 "Uncharacterized protein... 773 9.0e-77 1
UNIPROTKB|Q4R4R0 - symbol:PSMC2 "26S protease regulatory ... 773 9.0e-77 1
MGI|MGI:109555 - symbol:Psmc2 "proteasome (prosome, macro... 773 9.0e-77 1
ZFIN|ZDB-GENE-040426-1327 - symbol:psmc2 "proteasome (pro... 773 9.0e-77 1
WARNING: Descriptions of 632 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 1951 (691.8 bits), Expect = 1.3e-201, P = 1.3e-201
Identities = 386/424 (91%), Positives = 399/424 (94%)
Query: 1 MATAMVEDPN-LEDDQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXX 59
MAT MVED + E+DQL+SM+ +DI RA+RLLDNEIR+LKE+ QRTNLE DS+
Sbjct: 1 MATPMVEDTSSFEEDQLASMSTEDITRATRLLDNEIRILKEDAQRTNLECDSYKEKIKEN 60
Query: 60 XXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLP 119
LPYLVGNIVEILEMNPED+AEEDGANIDLDSQRKGKCVVLKTSTRQTIFLP
Sbjct: 61 QEKIKLNKQLPYLVGNIVEILEMNPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLP 120
Query: 120 VVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQI 179
VVGLVDPD LKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQI
Sbjct: 121 VVGLVDPDSLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQI 180
Query: 180 QELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQ 239
QELVEAIVLPMTHKERF+KLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQ
Sbjct: 181 QELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQ 240
Query: 240 LVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLN 299
LVQMFIGDGAKLVRDAFQLAKEK+PCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLN
Sbjct: 241 LVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLN 300
Query: 300 QLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNV 359
QLDGFSSD+RIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNV
Sbjct: 301 QLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNV 360
Query: 360 HPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASL 419
HPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASL
Sbjct: 361 HPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASL 420
Query: 420 NYYA 423
NYYA
Sbjct: 421 NYYA 424
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 1924 (682.3 bits), Expect = 9.7e-199, P = 9.7e-199
Identities = 383/423 (90%), Positives = 394/423 (93%)
Query: 1 MATAMVEDPNLEDDQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXX 60
MATAM ED + E DQL+SMT DDI RASRLL NEIR+LKEE QRTNL+L+S
Sbjct: 1 MATAMAEDTSFEGDQLASMTTDDIGRASRLLANEIRILKEESQRTNLDLESVKEKIKENQ 60
Query: 61 XXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV 120
LPYLVGNIVEILEM+PED+AEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV
Sbjct: 61 EKIKLNKQLPYLVGNIVEILEMSPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV 120
Query: 121 VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ 180
VGLVDPD LKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ
Sbjct: 121 VGLVDPDTLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ 180
Query: 181 ELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL 240
ELVEAIVLPMTHKE+F+KLG+RPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL
Sbjct: 181 ELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL 240
Query: 241 VQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300
VQMFIGDGAKLVRDAF LAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ
Sbjct: 241 VQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300
Query: 301 LDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVH 360
LDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR RILQIHSRKMNV+
Sbjct: 301 LDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGRILQIHSRKMNVN 360
Query: 361 PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLN 420
DVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLN
Sbjct: 361 ADVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLN 420
Query: 421 YYA 423
YYA
Sbjct: 421 YYA 423
>ZFIN|ZDB-GENE-030131-666 [details] [associations]
symbol:psmc3 "proteasome (prosome, macropain) 26S
subunit, ATPase, 3" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-666 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 EMBL:BX957297 IPI:IPI00817732 PRIDE:F1QJQ2
Ensembl:ENSDART00000133705 ArrayExpress:F1QJQ2 Bgee:F1QJQ2
Uniprot:F1QJQ2
Length = 427
Score = 1609 (571.5 bits), Expect = 2.3e-165, P = 2.3e-165
Identities = 309/410 (75%), Positives = 358/410 (87%)
Query: 14 DQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLV 73
+++ M+ ++IV+ +RLLD+EI+++K E+ R EL + LPYLV
Sbjct: 19 EEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENTEKIKVNKTLPYLV 78
Query: 74 GNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGD 133
N++E+L+++P D+ EEDGANIDLDSQRKGKC V+KTSTRQT FLPV+GLVD +KLKPGD
Sbjct: 79 SNVIELLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGD 137
Query: 134 LVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHK 193
LVGVNKDSYLIL+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQIQELVEAIVLPM HK
Sbjct: 138 LVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHK 197
Query: 194 ERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVR 253
E+F+ LG++PPKGVL+YGPPGTGKTL+ARACAAQT ATFLKLAGPQLVQMFIGDGAKLVR
Sbjct: 198 EKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVR 257
Query: 254 DAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVI 313
DAF LAKEK+P IIFIDE+DAIGTKRFDSE +GDREVQRTMLELLNQLDGF + ++KVI
Sbjct: 258 DAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNMQVKVI 317
Query: 314 AATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTD 373
AATNR DILDPAL+RSGRLDRKIEFP P EEARARI+QIHSRKMNV PDVNFEELAR TD
Sbjct: 318 AATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVCPDVNFEELARCTD 377
Query: 374 DFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 423
DFNGAQ KAVCVEAGM+ALRR ATE+NHED+ EGI++VQAKKKA+L YYA
Sbjct: 378 DFNGAQCKAVCVEAGMIALRRGATELNHEDYMEGILEVQAKKKANLQYYA 427
>UNIPROTKB|F1SID4 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:CU856312
Ensembl:ENSSSCT00000014459 Uniprot:F1SID4
Length = 446
Score = 1604 (569.7 bits), Expect = 7.9e-165, P = 7.9e-165
Identities = 307/410 (74%), Positives = 357/410 (87%)
Query: 14 DQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLV 73
+++ M+ ++IV+ +RLLD+EI+++K E+ R EL + LPYLV
Sbjct: 38 EEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLV 97
Query: 74 GNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGD 133
N++E+L+++P D+ EEDGANIDLDSQRKGKC V+KTSTRQT FLPV+GLVD +KLKPGD
Sbjct: 98 SNVIELLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGD 156
Query: 134 LVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHK 193
LVGVNKDSYLIL+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQIQELVEAIVLPM HK
Sbjct: 157 LVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHK 216
Query: 194 ERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVR 253
E+F+ LG++PPKGVL+YGPPGTGKTL+ARACAAQT ATFLKLAGPQLVQMFIGDGAKLVR
Sbjct: 217 EKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVR 276
Query: 254 DAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVI 313
DAF LAKEK+P IIFIDE+DAIGTKRFDSE +GDREVQRTMLELLNQLDGF + ++KVI
Sbjct: 277 DAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVI 336
Query: 314 AATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTD 373
AATNR DILDPAL+RSGRLDRKIEFP P EEARARI+QIHSRKMNV PDVN+EELAR TD
Sbjct: 337 AATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTD 396
Query: 374 DFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 423
DFNGAQ KAVCVEAGM+ALRR ATE+ HED+ EGI++VQAKKKA+L YYA
Sbjct: 397 DFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 446
>MGI|MGI:1098754 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit,
ATPase 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1098754 GO:GO:0005524 GO:GO:0005634
GO:GO:0030163 GO:GO:0017111 GO:GO:0000932
GeneTree:ENSGT00560000077230 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624
CTD:5702 ChiTaRS:PSMC3 EMBL:D49686 EMBL:AB040858 EMBL:AY902337
EMBL:AL691439 EMBL:BC005783 IPI:IPI00133206 RefSeq:NP_032974.2
UniGene:Mm.289832 ProteinModelPortal:O88685 SMR:O88685
IntAct:O88685 STRING:O88685 PhosphoSite:O88685 PaxDb:O88685
PRIDE:O88685 Ensembl:ENSMUST00000067663 GeneID:19182 KEGG:mmu:19182
NextBio:295874 Bgee:O88685 Genevestigator:O88685
GermOnline:ENSMUSG00000002102 Uniprot:O88685
Length = 442
Score = 1604 (569.7 bits), Expect = 7.9e-165, P = 7.9e-165
Identities = 307/410 (74%), Positives = 357/410 (87%)
Query: 14 DQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLV 73
+++ M+ ++IV+ +RLLD+EI+++K E+ R EL + LPYLV
Sbjct: 34 EEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLV 93
Query: 74 GNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGD 133
N++E+L+++P D+ EEDGANIDLDSQRKGKC V+KTSTRQT FLPV+GLVD +KLKPGD
Sbjct: 94 SNVIELLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGD 152
Query: 134 LVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHK 193
LVGVNKDSYLIL+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQIQELVEAIVLPM HK
Sbjct: 153 LVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHK 212
Query: 194 ERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVR 253
E+F+ LG++PPKGVL+YGPPGTGKTL+ARACAAQT ATFLKLAGPQLVQMFIGDGAKLVR
Sbjct: 213 EKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVR 272
Query: 254 DAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVI 313
DAF LAKEK+P IIFIDE+DAIGTKRFDSE +GDREVQRTMLELLNQLDGF + ++KVI
Sbjct: 273 DAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVI 332
Query: 314 AATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTD 373
AATNR DILDPAL+RSGRLDRKIEFP P EEARARI+QIHSRKMNV PDVN+EELAR TD
Sbjct: 333 AATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTD 392
Query: 374 DFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 423
DFNGAQ KAVCVEAGM+ALRR ATE+ HED+ EGI++VQAKKKA+L YYA
Sbjct: 393 DFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 442
>RGD|61905 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit, ATPase
3" species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0001824 "blastocyst development"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA;ISO;ISS]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:61905 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0030163 GO:GO:0017111
GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
KO:K03065 GO:GO:0022624 CTD:5702 EMBL:D83522 EMBL:U77918
IPI:IPI00421528 RefSeq:NP_113783.1 UniGene:Rn.11173
ProteinModelPortal:Q63569 IntAct:Q63569 STRING:Q63569
PhosphoSite:Q63569 PRIDE:Q63569 GeneID:29677 KEGG:rno:29677
UCSC:RGD:61905 NextBio:610019 ArrayExpress:Q63569
Genevestigator:Q63569 GermOnline:ENSRNOG00000011414 Uniprot:Q63569
Length = 439
Score = 1604 (569.7 bits), Expect = 7.9e-165, P = 7.9e-165
Identities = 307/410 (74%), Positives = 357/410 (87%)
Query: 14 DQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLV 73
+++ M+ ++IV+ +RLLD+EI+++K E+ R EL + LPYLV
Sbjct: 31 EEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLV 90
Query: 74 GNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGD 133
N++E+L+++P D+ EEDGANIDLDSQRKGKC V+KTSTRQT FLPV+GLVD +KLKPGD
Sbjct: 91 SNVIELLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGD 149
Query: 134 LVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHK 193
LVGVNKDSYLIL+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQIQELVEAIVLPM HK
Sbjct: 150 LVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHK 209
Query: 194 ERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVR 253
E+F+ LG++PPKGVL+YGPPGTGKTL+ARACAAQT ATFLKLAGPQLVQMFIGDGAKLVR
Sbjct: 210 EKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVR 269
Query: 254 DAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVI 313
DAF LAKEK+P IIFIDE+DAIGTKRFDSE +GDREVQRTMLELLNQLDGF + ++KVI
Sbjct: 270 DAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVI 329
Query: 314 AATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTD 373
AATNR DILDPAL+RSGRLDRKIEFP P EEARARI+QIHSRKMNV PDVN+EELAR TD
Sbjct: 330 AATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTD 389
Query: 374 DFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 423
DFNGAQ KAVCVEAGM+ALRR ATE+ HED+ EGI++VQAKKKA+L YYA
Sbjct: 390 DFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 439
>UNIPROTKB|Q6P6U2 [details] [associations]
symbol:Psmc3 "26S protease regulatory subunit 6A"
species:10116 "Rattus norvegicus" [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:61905 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:CH473949
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
IPI:IPI00421528 UniGene:Rn.11173 EMBL:BC062019 SMR:Q6P6U2
IntAct:Q6P6U2 STRING:Q6P6U2 Ensembl:ENSRNOT00000015757
Genevestigator:Q6P6U2 Uniprot:Q6P6U2
Length = 442
Score = 1604 (569.7 bits), Expect = 7.9e-165, P = 7.9e-165
Identities = 307/410 (74%), Positives = 357/410 (87%)
Query: 14 DQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLV 73
+++ M+ ++IV+ +RLLD+EI+++K E+ R EL + LPYLV
Sbjct: 34 EEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLV 93
Query: 74 GNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGD 133
N++E+L+++P D+ EEDGANIDLDSQRKGKC V+KTSTRQT FLPV+GLVD +KLKPGD
Sbjct: 94 SNVIELLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGD 152
Query: 134 LVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHK 193
LVGVNKDSYLIL+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQIQELVEAIVLPM HK
Sbjct: 153 LVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHK 212
Query: 194 ERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVR 253
E+F+ LG++PPKGVL+YGPPGTGKTL+ARACAAQT ATFLKLAGPQLVQMFIGDGAKLVR
Sbjct: 213 EKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVR 272
Query: 254 DAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVI 313
DAF LAKEK+P IIFIDE+DAIGTKRFDSE +GDREVQRTMLELLNQLDGF + ++KVI
Sbjct: 273 DAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVI 332
Query: 314 AATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTD 373
AATNR DILDPAL+RSGRLDRKIEFP P EEARARI+QIHSRKMNV PDVN+EELAR TD
Sbjct: 333 AATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTD 392
Query: 374 DFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 423
DFNGAQ KAVCVEAGM+ALRR ATE+ HED+ EGI++VQAKKKA+L YYA
Sbjct: 393 DFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 442
>UNIPROTKB|F1PBK7 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:AAEX03011486
Ensembl:ENSCAFT00000013842 Uniprot:F1PBK7
Length = 439
Score = 1603 (569.3 bits), Expect = 1.0e-164, P = 1.0e-164
Identities = 306/410 (74%), Positives = 357/410 (87%)
Query: 14 DQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLV 73
+++ M+ ++I++ +RLLD+EI+++K E+ R EL + LPYLV
Sbjct: 31 EEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLV 90
Query: 74 GNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGD 133
N++E+L+++P D+ EEDGANIDLDSQRKGKC V+KTSTRQT FLPV+GLVD +KLKPGD
Sbjct: 91 SNVIELLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGD 149
Query: 134 LVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHK 193
LVGVNKDSYLIL+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQIQELVEAIVLPM HK
Sbjct: 150 LVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHK 209
Query: 194 ERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVR 253
E+F+ LG++PPKGVL+YGPPGTGKTL+ARACAAQT ATFLKLAGPQLVQMFIGDGAKLVR
Sbjct: 210 EKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVR 269
Query: 254 DAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVI 313
DAF LAKEK+P IIFIDE+DAIGTKRFDSE +GDREVQRTMLELLNQLDGF + ++KVI
Sbjct: 270 DAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVI 329
Query: 314 AATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTD 373
AATNR DILDPAL+RSGRLDRKIEFP P EEARARI+QIHSRKMNV PDVN+EELAR TD
Sbjct: 330 AATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTD 389
Query: 374 DFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 423
DFNGAQ KAVCVEAGM+ALRR ATE+ HED+ EGI++VQAKKKA+L YYA
Sbjct: 390 DFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 439
>UNIPROTKB|P17980 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0001824
"blastocyst development" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0003714
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
EMBL:CH471064 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0003713 GO:GO:0051436
GO:GO:0017111 GO:GO:0000932 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
GO:GO:0001824 Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 OMA:GALMYGP
EMBL:AK313518 EMBL:BC008713 EMBL:BC073165 EMBL:BC106920
EMBL:BC107804 EMBL:AK222485 EMBL:M34079 EMBL:CR456731
IPI:IPI00018398 PIR:A34832 RefSeq:NP_002795.2 UniGene:Hs.250758
ProteinModelPortal:P17980 SMR:P17980 DIP:DIP-27555N IntAct:P17980
MINT:MINT-1149785 STRING:P17980 PhosphoSite:P17980 DMDM:20532406
REPRODUCTION-2DPAGE:IPI00018398 PaxDb:P17980 PeptideAtlas:P17980
PRIDE:P17980 DNASU:5702 Ensembl:ENST00000298852 GeneID:5702
KEGG:hsa:5702 UCSC:uc001nfh.2 CTD:5702 GeneCards:GC11M047440
HGNC:HGNC:9549 HPA:HPA006065 MIM:186852 neXtProt:NX_P17980
PharmGKB:PA33894 InParanoid:P17980 OrthoDB:EOG46143Z
PhylomeDB:P17980 ChiTaRS:PSMC3 GenomeRNAi:5702 NextBio:22154
PMAP-CutDB:P17980 ArrayExpress:P17980 Bgee:P17980 CleanEx:HS_PSMC3
Genevestigator:P17980 GermOnline:ENSG00000165916 Uniprot:P17980
Length = 439
Score = 1603 (569.3 bits), Expect = 1.0e-164, P = 1.0e-164
Identities = 306/410 (74%), Positives = 357/410 (87%)
Query: 14 DQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLV 73
+++ M+ ++I++ +RLLD+EI+++K E+ R EL + LPYLV
Sbjct: 31 EEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLV 90
Query: 74 GNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGD 133
N++E+L+++P D+ EEDGANIDLDSQRKGKC V+KTSTRQT FLPV+GLVD +KLKPGD
Sbjct: 91 SNVIELLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGD 149
Query: 134 LVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHK 193
LVGVNKDSYLIL+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQIQELVEAIVLPM HK
Sbjct: 150 LVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHK 209
Query: 194 ERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVR 253
E+F+ LG++PPKGVL+YGPPGTGKTL+ARACAAQT ATFLKLAGPQLVQMFIGDGAKLVR
Sbjct: 210 EKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVR 269
Query: 254 DAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVI 313
DAF LAKEK+P IIFIDE+DAIGTKRFDSE +GDREVQRTMLELLNQLDGF + ++KVI
Sbjct: 270 DAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVI 329
Query: 314 AATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTD 373
AATNR DILDPAL+RSGRLDRKIEFP P EEARARI+QIHSRKMNV PDVN+EELAR TD
Sbjct: 330 AATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTD 389
Query: 374 DFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 423
DFNGAQ KAVCVEAGM+ALRR ATE+ HED+ EGI++VQAKKKA+L YYA
Sbjct: 390 DFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 439
>UNIPROTKB|O42586 [details] [associations]
symbol:psmc3-b "26S protease regulatory subunit 6A-B"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 EMBL:Y10460 UniGene:Xl.113 ProteinModelPortal:O42586
Xenbase:XB-GENE-1009853 Uniprot:O42586
Length = 404
Score = 1590 (564.8 bits), Expect = 2.4e-163, P = 2.4e-163
Identities = 304/405 (75%), Positives = 352/405 (86%)
Query: 19 MTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVE 78
M+ ++I++ +RLLD+EI+++K E+ R EL + LPYLV N++E
Sbjct: 1 MSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMRDKIKENSEKIKVNKTLPYLVSNVIE 60
Query: 79 ILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVN 138
+L+++P D+ EEDGANIDLDSQRKGKC V+KTSTRQT FLPV+GLVD +KLKPGDLVGVN
Sbjct: 61 LLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVN 119
Query: 139 KDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQK 198
KDSYLIL+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQIQELVEAIVLPM HKE+F+
Sbjct: 120 KDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFEN 179
Query: 199 LGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQL 258
LG++PPKGVL+YGPPGTGKTL+ARACAAQT ATFLKLAGPQLVQMFIGDGAKLVRDAF L
Sbjct: 180 LGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFSL 239
Query: 259 AKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNR 318
AKEK+P IIFIDE+DAIG KRFDSE +GDREVQRTMLELLNQLDGF ++KVIAATNR
Sbjct: 240 AKEKAPSIIFIDELDAIGNKRFDSEKAGDREVQRTMLELLNQLDGFQPTTQVKVIAATNR 299
Query: 319 ADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGA 378
DILDPAL+RSGRLDRKIEFP P EEARARI+QIHSRKMNV PDVN+EELAR TDDFNGA
Sbjct: 300 VDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGA 359
Query: 379 QLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 423
Q KAVCVEAG++ALRR ATE+ HED+ EGI++VQAKKKA+L YYA
Sbjct: 360 QCKAVCVEAGIIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 404
>UNIPROTKB|J9NWA6 [details] [associations]
symbol:LOC100687152 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AAEX03026457 Ensembl:ENSCAFT00000026372 OMA:REAVEQP
Uniprot:J9NWA6
Length = 434
Score = 1584 (562.7 bits), Expect = 1.0e-162, P = 1.0e-162
Identities = 302/410 (73%), Positives = 354/410 (86%)
Query: 14 DQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLV 73
+++ M+ ++I++ +RLLD+EI+++K E+ R EL + LPYLV
Sbjct: 26 EEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLV 85
Query: 74 GNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGD 133
N++E+L+++P D+ EEDGANIDLDSQRKGKC V+KTSTRQT FLPV+GLVD +KLKPGD
Sbjct: 86 SNVIELLDVHPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGD 144
Query: 134 LVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHK 193
LVGVNKDSYLIL+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQIQELVEAIVLPM HK
Sbjct: 145 LVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHK 204
Query: 194 ERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVR 253
E+F+ LG++PPKGVL+YGPPGTGKTL+ARACAAQT ATFLKLAGPQLVQMFIGDGAKLVR
Sbjct: 205 EKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVR 264
Query: 254 DAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVI 313
DAF LAKEK+P IIFIDE+DA GTKRFDSE +GDREVQRTMLELLNQLDGF + ++KVI
Sbjct: 265 DAFALAKEKAPSIIFIDELDATGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVI 324
Query: 314 AATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTD 373
AATNR DILDPAL+RSGRLD+KIEFP P EEARARI+QIHSRKMNV PDVN+EELAR D
Sbjct: 325 AATNRVDILDPALLRSGRLDQKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCMD 384
Query: 374 DFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 423
DFNGAQ KAVCVEAGM+ALRR TE+ HED+ EGI++VQAKKKA+L YYA
Sbjct: 385 DFNGAQCKAVCVEAGMIALRRGTTELTHEDYMEGILEVQAKKKANLQYYA 434
>UNIPROTKB|F1MWE0 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:DAAA02041602 IPI:IPI00701790
UniGene:Bt.49089 Ensembl:ENSBTAT00000028983 NextBio:20868523
Uniprot:F1MWE0
Length = 456
Score = 1564 (555.6 bits), Expect = 1.4e-160, P = 1.4e-160
Identities = 306/426 (71%), Positives = 357/426 (83%)
Query: 14 DQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLV 73
+++ M+ ++I++ +RLLD+EI+++K E+ R EL + LPYLV
Sbjct: 32 EEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLV 91
Query: 74 GNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGD 133
N++E+L+++P D+ EEDGANIDLDSQRKGKC V+KTSTRQT FLPV+GLVD +KLKPGD
Sbjct: 92 SNVIELLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGD 150
Query: 134 LVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQE------------ 181
LVGVNKDSYLIL+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQIQE
Sbjct: 151 LVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQEVREARHLTSLLC 210
Query: 182 ----LVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAG 237
LVEAIVLPM HKE+F+ LG++PPKGVL+YGPPGTGKTL+ARACAAQT ATFLKLAG
Sbjct: 211 LSASLVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAG 270
Query: 238 PQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLEL 297
PQLVQMFIGDGAKLVRDAF LAKEK+P IIFIDE+DAIGTKRFDSE +GDREVQRTMLEL
Sbjct: 271 PQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLEL 330
Query: 298 LNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKM 357
LNQLDGF + ++KVIAATNR DILDPAL+RSGRLDRKIEFP P EEARARI+QIHSRKM
Sbjct: 331 LNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKM 390
Query: 358 NVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKA 417
NV PDVN+EELAR TDDFNGAQ KAVCVEAGM+ALRR ATE+ HED+ EGI++VQAKKKA
Sbjct: 391 NVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKA 450
Query: 418 SLNYYA 423
+L YYA
Sbjct: 451 NLQYYA 456
>WB|WBGene00004505 [details] [associations]
symbol:rpt-5 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:FO080337
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371
SMR:O76371 IntAct:O76371 MINT:MINT-211164 STRING:O76371
PaxDb:O76371 EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2
GeneID:172238 KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238
WormBase:F56H1.4 InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 1560 (554.2 bits), Expect = 3.6e-160, P = 3.6e-160
Identities = 301/411 (73%), Positives = 348/411 (84%)
Query: 13 DDQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYL 72
D+++ M+ +D+ + LLDNEIR+++ E+QR N + LPYL
Sbjct: 23 DEEILKMSTEDLKSRTHLLDNEIRIMRSEVQRINHSATTLKERIKENTERIKVNKTLPYL 82
Query: 73 VGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPG 132
V N+VE+L++ ED EE+GAN+DLD+Q K KC V+KTSTR T FLPVVGLVDPD+LKPG
Sbjct: 83 VSNVVELLDL--EDNTEEEGANVDLDAQ-KTKCAVIKTSTRATYFLPVVGLVDPDELKPG 139
Query: 133 DLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTH 192
DLVGVNKDSYLIL+ LP+EYDSRVKAMEVDE+PTE Y+DIGG +KQIQEL+EA+VLPMTH
Sbjct: 140 DLVGVNKDSYLILEKLPAEYDSRVKAMEVDERPTEQYSDIGGCDKQIQELIEAVVLPMTH 199
Query: 193 KERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV 252
K+RF LG+ PPKGVL+YGPPGTGKT+MARA AAQT +TFLKLAGPQLVQMFIGDGAKLV
Sbjct: 200 KDRFVNLGIHPPKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQLVQMFIGDGAKLV 259
Query: 253 RDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKV 312
RDAF LAKEK+P IIFIDE+DAIGTKRFDSE +GDREVQRTMLELLNQLDGF +D IKV
Sbjct: 260 RDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNDDIKV 319
Query: 313 IAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARST 372
IAATNR D+LDPAL+RSGRLDRKIE PHP E+ARARI+QIHSRKMNV+ DVNFEELAR T
Sbjct: 320 IAATNRIDVLDPALLRSGRLDRKIELPHPNEDARARIMQIHSRKMNVNKDVNFEELARCT 379
Query: 373 DDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 423
DDFNGAQ KAVCVEAGM+ALRRDATE+ HEDF + I++VQAKKKASLNYYA
Sbjct: 380 DDFNGAQCKAVCVEAGMIALRRDATEILHEDFMDAILEVQAKKKASLNYYA 430
>UNIPROTKB|O76371 [details] [associations]
symbol:rpt-5 "Protein RPT-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
GeneTree:ENSGT00560000077230 EMBL:FO080337 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371 SMR:O76371
IntAct:O76371 MINT:MINT-211164 STRING:O76371 PaxDb:O76371
EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2 GeneID:172238
KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238 WormBase:F56H1.4
InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 1560 (554.2 bits), Expect = 3.6e-160, P = 3.6e-160
Identities = 301/411 (73%), Positives = 348/411 (84%)
Query: 13 DDQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYL 72
D+++ M+ +D+ + LLDNEIR+++ E+QR N + LPYL
Sbjct: 23 DEEILKMSTEDLKSRTHLLDNEIRIMRSEVQRINHSATTLKERIKENTERIKVNKTLPYL 82
Query: 73 VGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPG 132
V N+VE+L++ ED EE+GAN+DLD+Q K KC V+KTSTR T FLPVVGLVDPD+LKPG
Sbjct: 83 VSNVVELLDL--EDNTEEEGANVDLDAQ-KTKCAVIKTSTRATYFLPVVGLVDPDELKPG 139
Query: 133 DLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTH 192
DLVGVNKDSYLIL+ LP+EYDSRVKAMEVDE+PTE Y+DIGG +KQIQEL+EA+VLPMTH
Sbjct: 140 DLVGVNKDSYLILEKLPAEYDSRVKAMEVDERPTEQYSDIGGCDKQIQELIEAVVLPMTH 199
Query: 193 KERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV 252
K+RF LG+ PPKGVL+YGPPGTGKT+MARA AAQT +TFLKLAGPQLVQMFIGDGAKLV
Sbjct: 200 KDRFVNLGIHPPKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQLVQMFIGDGAKLV 259
Query: 253 RDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKV 312
RDAF LAKEK+P IIFIDE+DAIGTKRFDSE +GDREVQRTMLELLNQLDGF +D IKV
Sbjct: 260 RDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNDDIKV 319
Query: 313 IAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARST 372
IAATNR D+LDPAL+RSGRLDRKIE PHP E+ARARI+QIHSRKMNV+ DVNFEELAR T
Sbjct: 320 IAATNRIDVLDPALLRSGRLDRKIELPHPNEDARARIMQIHSRKMNVNKDVNFEELARCT 379
Query: 373 DDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 423
DDFNGAQ KAVCVEAGM+ALRRDATE+ HEDF + I++VQAKKKASLNYYA
Sbjct: 380 DDFNGAQCKAVCVEAGMIALRRDATEILHEDFMDAILEVQAKKKASLNYYA 430
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 1502 (533.8 bits), Expect = 1.3e-158, Sum P(2) = 1.3e-158
Identities = 287/352 (81%), Positives = 325/352 (92%)
Query: 72 LVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKP 131
L+ + +++L+++P D+ EEDGANIDLDSQRKGKC V+KTSTRQT FLPV+GLVD +KLKP
Sbjct: 47 LLDSEIKLLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKP 105
Query: 132 GDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMT 191
GDLVGVNKDSYLIL+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQIQELVEAIVLPM
Sbjct: 106 GDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMN 165
Query: 192 HKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKL 251
HKE+F+ LG++PPKGVL+YGPPGTGKTL+ARACAAQT ATFLKLAGPQLVQMFIGDGAKL
Sbjct: 166 HKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKL 225
Query: 252 VRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIK 311
VRDAF LAKEK+P IIFIDE+DAIGTKRFDSE +GDREVQRTMLELLNQLDGF + ++K
Sbjct: 226 VRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVK 285
Query: 312 VIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARS 371
VIAATNR DILDPAL+RSGRLDRKIEFP P EEARARI+QIHSRKMNV PDVN+EELAR
Sbjct: 286 VIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARC 345
Query: 372 TDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 423
TDDFNGAQ KAVCVEAGM+ALRR ATE+ HED+ EGI++VQAKKKA+L YYA
Sbjct: 346 TDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 397
Score = 65 (27.9 bits), Expect = 1.3e-158, Sum P(2) = 1.3e-158
Identities = 14/43 (32%), Positives = 29/43 (67%)
Query: 14 DQLSSMTADDIVRASRLLDNEIRVLK-----EELQRTNLELDS 51
+++ M+ ++I++ +RLLD+EI++L +E N++LDS
Sbjct: 31 EEVLKMSTEEIIQRTRLLDSEIKLLDVDPNDQEEDGANIDLDS 73
>FB|FBgn0028684 [details] [associations]
symbol:Rpt5 "Regulatory particle triple-A ATPase 5"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS;IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005937 Pfam:PF00004 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 HSSP:Q01853 TIGRFAMs:TIGR01242 GO:GO:0008540
ChiTaRS:PSMC3 FlyBase:FBgn0028684 EMBL:AF134402
ProteinModelPortal:Q9XZC3 STRING:Q9XZC3 PRIDE:Q9XZC3
InParanoid:Q9XZC3 ArrayExpress:Q9XZC3 Bgee:Q9XZC3 Uniprot:Q9XZC3
Length = 431
Score = 1530 (543.6 bits), Expect = 5.5e-157, P = 5.5e-157
Identities = 295/410 (71%), Positives = 349/410 (85%)
Query: 14 DQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLV 73
+++ M+ D+IV +RL+DNEI+++K E+ R E+ + LPYLV
Sbjct: 24 EKVMRMSTDEIVSRTRLMDNEIKIMKSEVIRITHEIQAQNEKIKDNTEKIKVNKTLPYLV 83
Query: 74 GNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGD 133
N++E+L+++P++E E+DG+ LD+QRKGKC V+KTSTRQ FLPV+GLVD +KLKPGD
Sbjct: 84 SNVIELLDVDPQEE-EDDGSVTVLDNQRKGKCAVIKTSTRQAYFLPVIGLVDAEKLKPGD 142
Query: 134 LVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHK 193
L GVNKD YLIL+TLP+EYD+RVKAMEVDE+PTE ++DIGGL+KQIQEL+EA+VLPMTHK
Sbjct: 143 LAGVNKDFYLILETLPAEYDARVKAMEVDERPTEQFSDIGGLDKQIQELIEAVVLPMTHK 202
Query: 194 ERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVR 253
E+F+ LG+ PPKGV+LYGPPGTGKTL+ARACAAQT +TFLKLAGPQLVQMFIGDGAKLVR
Sbjct: 203 EKFKNLGIHPPKGVILYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVR 262
Query: 254 DAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVI 313
DAF LAKEK+P IIFIDE+DAIGTKRFDSE +GDREVQRTMLELLNQL+GFSS IKVI
Sbjct: 263 DAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLNGFSSTADIKVI 322
Query: 314 AATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTD 373
AATNR DIL PAL+RSGRLDRKIEFPHP EEARARI+QIHSRKMNV DVNFEEL+RSTD
Sbjct: 323 AATNRVDIL-PALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSNDVNFEELSRSTD 381
Query: 374 DFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 423
DFNGAQ KAVCVEAGM+ALRR A V HEDF + I++VQAKKKA+LNYYA
Sbjct: 382 DFNGAQCKAVCVEAGMIALRRSANSVTHEDFMDAIMEVQAKKKANLNYYA 431
>ASPGD|ASPL0000010049 [details] [associations]
symbol:AN4236 species:162425 "Emericella nidulans"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001302 GO:GO:0030163
GO:GO:0017111 EMBL:AACD01000068 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP OrthoDB:EOG40VZZ2
RefSeq:XP_661840.1 ProteinModelPortal:Q5B5E4 STRING:Q5B5E4
EnsemblFungi:CADANIAT00004422 GeneID:2873654 KEGG:ani:AN4236.2
Uniprot:Q5B5E4
Length = 465
Score = 1488 (528.9 bits), Expect = 1.5e-152, P = 1.5e-152
Identities = 286/410 (69%), Positives = 343/410 (83%)
Query: 7 EDPNLEDDQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXX 66
ED +L D+++ + + DI++ R+L+NE+R++K E QR E ++
Sbjct: 48 EDDDLLDEEILNSSTADIIKRRRMLENELRIMKSEYQRLTHEQNTMKEKVKDNQEKIENN 107
Query: 67 XXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDP 126
LPYLVGN+VE+L+++ E EA E+GANIDLD+ R GK V+KTSTRQTI+LP++GLVD
Sbjct: 108 RQLPYLVGNVVELLDLDVEAEAAEEGANIDLDATRVGKSAVIKTSTRQTIYLPLIGLVDH 167
Query: 127 DKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAI 186
+KLKPGDL+GVNKDSYLILDTLP+EYD+RVKAMEVDEKPTE Y DIGGL+KQI+E+VEAI
Sbjct: 168 EKLKPGDLIGVNKDSYLILDTLPAEYDNRVKAMEVDEKPTEKYTDIGGLDKQIEEIVEAI 227
Query: 187 VLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIG 246
V PM ERF+KLG++ PKG L+YGPPGTGKTL+ARACAA+TNATFLKLAGPQLVQMFIG
Sbjct: 228 VWPMKEAERFKKLGIKAPKGALMYGPPGTGKTLLARACAAETNATFLKLAGPQLVQMFIG 287
Query: 247 DGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSS 306
DGAKLVRD F LAKEK+P IIFIDE+DA+GTKRFDSE SGDREVQRTMLELLNQLDGF+S
Sbjct: 288 DGAKLVRDCFALAKEKAPSIIFIDELDAVGTKRFDSEKSGDREVQRTMLELLNQLDGFAS 347
Query: 307 DDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFE 366
DDRIKV+AATNR D+LDPAL+RSGRLDRKIEFP P EEARA ILQIHSRKM V VN+
Sbjct: 348 DDRIKVLAATNRVDVLDPALLRSGRLDRKIEFPLPNEEARANILQIHSRKMTVEDSVNWA 407
Query: 367 ELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 416
ELARSTD+F GAQLKAVCVEAGM+ALR+ +++ HE++ + I +VQAKKK
Sbjct: 408 ELARSTDEFGGAQLKAVCVEAGMIALRKGHSKIGHENYVDAIAEVQAKKK 457
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 1485 (527.8 bits), Expect = 3.2e-152, P = 3.2e-152
Identities = 293/431 (67%), Positives = 349/431 (80%)
Query: 7 EDPNLEDDQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXX 66
E+ N+E+ + ++ +I L+D EI++LK E R E +
Sbjct: 10 EEVNVEE--IEKLSNSEIKTRVSLIDTEIKILKNEHARLKNEYKNLQEKIKDNVEKIHLN 67
Query: 67 XXLPYLVGNIVEILEMNPEDEAEE--DGANI-------------DLDSQRKGKCVVLKTS 111
LPYLV N+VE L++ E+E E D ++ D+D +++GKC+V+KTS
Sbjct: 68 KMLPYLVANVVESLDLEDEEEENEIKDEYDLYDNNLKLSHEGFRDIDDEKRGKCMVIKTS 127
Query: 112 TRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYND 171
TRQTIFLPV GL+D +LKPGDLVGVNKDSYLI+D LP EYD+RVKAMEV EKP+EDY+D
Sbjct: 128 TRQTIFLPVPGLIDASELKPGDLVGVNKDSYLIIDKLPQEYDNRVKAMEVIEKPSEDYSD 187
Query: 172 IGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNAT 231
IGGL+KQI++LVEAIVLPM HKE+F+K+G++PPKGVL++GPPGTGKTL+ARACA+QTNAT
Sbjct: 188 IGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQTNAT 247
Query: 232 FLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQ 291
FLKLAGPQLVQMFIGDGAK+VRDAF LAKEK+P IIFIDE+DAIGTKRFDSE+SGDREVQ
Sbjct: 248 FLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRFDSELSGDREVQ 307
Query: 292 RTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQ 351
RTMLELLNQLDGFS+DD +KVIAATNR D LDPAL+RSGRLDRKIE PHP EE+RARILQ
Sbjct: 308 RTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPHPNEESRARILQ 367
Query: 352 IHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV 411
IHSRKMNVH DVNFEELARSTDDFNGAQLKAVCVEAGM+ALRR ATE++HEDF EGI V
Sbjct: 368 IHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALRRGATEIDHEDFVEGITSV 427
Query: 412 QAKKKASLNYY 422
+KKK++LNY+
Sbjct: 428 LSKKKSTLNYF 438
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 1485 (527.8 bits), Expect = 3.2e-152, P = 3.2e-152
Identities = 293/431 (67%), Positives = 349/431 (80%)
Query: 7 EDPNLEDDQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXX 66
E+ N+E+ + ++ +I L+D EI++LK E R E +
Sbjct: 10 EEVNVEE--IEKLSNSEIKTRVSLIDTEIKILKNEHARLKNEYKNLQEKIKDNVEKIHLN 67
Query: 67 XXLPYLVGNIVEILEMNPEDEAEE--DGANI-------------DLDSQRKGKCVVLKTS 111
LPYLV N+VE L++ E+E E D ++ D+D +++GKC+V+KTS
Sbjct: 68 KMLPYLVANVVESLDLEDEEEENEIKDEYDLYDNNLKLSHEGFRDIDDEKRGKCMVIKTS 127
Query: 112 TRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYND 171
TRQTIFLPV GL+D +LKPGDLVGVNKDSYLI+D LP EYD+RVKAMEV EKP+EDY+D
Sbjct: 128 TRQTIFLPVPGLIDASELKPGDLVGVNKDSYLIIDKLPQEYDNRVKAMEVIEKPSEDYSD 187
Query: 172 IGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNAT 231
IGGL+KQI++LVEAIVLPM HKE+F+K+G++PPKGVL++GPPGTGKTL+ARACA+QTNAT
Sbjct: 188 IGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQTNAT 247
Query: 232 FLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQ 291
FLKLAGPQLVQMFIGDGAK+VRDAF LAKEK+P IIFIDE+DAIGTKRFDSE+SGDREVQ
Sbjct: 248 FLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRFDSELSGDREVQ 307
Query: 292 RTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQ 351
RTMLELLNQLDGFS+DD +KVIAATNR D LDPAL+RSGRLDRKIE PHP EE+RARILQ
Sbjct: 308 RTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPHPNEESRARILQ 367
Query: 352 IHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV 411
IHSRKMNVH DVNFEELARSTDDFNGAQLKAVCVEAGM+ALRR ATE++HEDF EGI V
Sbjct: 368 IHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALRRGATEIDHEDFVEGITSV 427
Query: 412 QAKKKASLNYY 422
+KKK++LNY+
Sbjct: 428 LSKKKSTLNYF 438
>DICTYBASE|DDB_G0284415 [details] [associations]
symbol:psmC3 "26S proteasome ATPase 3 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284415 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0030163 GO:GO:0000502
HSSP:Q01853 GO:GO:0017111 EMBL:AAFI02000064 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
RefSeq:XP_638617.1 ProteinModelPortal:Q54PN7 STRING:Q54PN7
PRIDE:Q54PN7 EnsemblProtists:DDB0232967 GeneID:8624588
KEGG:ddi:DDB_G0284415 InParanoid:Q54PN7 OMA:GALMYGP
ProtClustDB:CLSZ2433711 Uniprot:Q54PN7
Length = 421
Score = 1476 (524.6 bits), Expect = 2.9e-151, P = 2.9e-151
Identities = 292/410 (71%), Positives = 337/410 (82%)
Query: 14 DQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLV 73
D++ MTAD++ R ++LL+NE +VL+ E +LE+DS LP+LV
Sbjct: 24 DEIFQMTADEVNRKAKLLENETKVLRSEHISKHLEMDSIQKRIKENNDKLQVNTQLPHLV 83
Query: 74 GNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGD 133
N+VEI++M + E + KCVV+K STRQTIFL G+VD DKL+PGD
Sbjct: 84 ANVVEIIDMVLDGETQPS------------KCVVVKASTRQTIFLAYPGIVDVDKLRPGD 131
Query: 134 LVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHK 193
LVG+NKDSY+ILDTLP EYDSRVKAME+DEKPTE+Y+DIGGL+KQIQELVEA+VLPMTHK
Sbjct: 132 LVGINKDSYIILDTLPPEYDSRVKAMEIDEKPTEEYSDIGGLDKQIQELVEAVVLPMTHK 191
Query: 194 ERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVR 253
ERF+ +G++PPKGVL+YGPPGTGKTL+ARACAAQTN+T+LKLAGPQLVQMFIGDGAKLVR
Sbjct: 192 ERFESIGIKPPKGVLMYGPPGTGKTLLARACAAQTNSTYLKLAGPQLVQMFIGDGAKLVR 251
Query: 254 DAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVI 313
DAF LAKEK P IIFIDE+DAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSD IKVI
Sbjct: 252 DAFALAKEKGPTIIFIDELDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDANIKVI 311
Query: 314 AATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTD 373
AATNR DILDPAL+RSGRLDRKIEFP P EEARA ILQIHSRKMNV DVNF+ELARS++
Sbjct: 312 AATNRIDILDPALLRSGRLDRKIEFPLPNEEARAHILQIHSRKMNVSADVNFDELARSSE 371
Query: 374 DFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 423
DFNGAQLKAVCVEAGM+ALRR TE+ H DF EG ++V AKKK +L YYA
Sbjct: 372 DFNGAQLKAVCVEAGMIALRRGGTELIHNDFVEGCVEVMAKKKKTLEYYA 421
>CGD|CAL0002261 [details] [associations]
symbol:RPT5 species:5476 "Candida albicans" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0002261 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000086 EMBL:AACQ01000085 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 RefSeq:XP_715432.1 RefSeq:XP_715502.1
ProteinModelPortal:Q5A0X3 STRING:Q5A0X3 GeneID:3642858
GeneID:3642911 KEGG:cal:CaO19.10635 KEGG:cal:CaO19.3123
Uniprot:Q5A0X3
Length = 454
Score = 1467 (521.5 bits), Expect = 2.6e-150, P = 2.6e-150
Identities = 281/418 (67%), Positives = 342/418 (81%)
Query: 7 EDPNLEDDQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXX 66
++ N+ D ++ + + DI+ ++LLDN+I+V++ E QR N E
Sbjct: 37 QEENVIDQEILNSSTSDIINRTKLLDNDIKVMRSESQRLNHEKTVMLERIKDNQEKINNN 96
Query: 67 XXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDP 126
LPYLVGN+VE+L ++ + EA E GANID+D+ R GK V+KTSTRQTIFLP++GLVDP
Sbjct: 97 KQLPYLVGNVVELLNLDADKEASEQGANIDIDAARAGKSAVIKTSTRQTIFLPMIGLVDP 156
Query: 127 DKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAI 186
KLKP DL+GVNKDSYL+LDTLPSEYDSRVKAMEVDEKPTEDY+DIGGL+KQI+EL+EA+
Sbjct: 157 SKLKPNDLIGVNKDSYLVLDTLPSEYDSRVKAMEVDEKPTEDYSDIGGLDKQIEELIEAV 216
Query: 187 VLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIG 246
VLPM ++F+ LG++PPKG L+YGPPGTGKTL+ARACAAQ+ ATFLKLA PQLVQMFIG
Sbjct: 217 VLPMKQADKFKNLGIKPPKGALMYGPPGTGKTLLARACAAQSGATFLKLAAPQLVQMFIG 276
Query: 247 DGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSS 306
DGAKLVRDAF LAKEK+P IIFIDE+DAIGTKRFDS+ SGDREVQRTMLELLNQLDGF S
Sbjct: 277 DGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSDKSGDREVQRTMLELLNQLDGFGS 336
Query: 307 DDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNV-HPDVNF 365
DDR+KV+AATNR D LDPAL+RSGRLDRKIEFP P+EEAR +L+IH+RK++ + VN+
Sbjct: 337 DDRVKVLAATNRVDTLDPALLRSGRLDRKIEFPLPSEEARESVLKIHARKLHCDNNSVNW 396
Query: 366 EELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 423
ELARSTD+FNGAQLKAV VEAGM+ALR + + HEDF E I +VQA+K S+N+YA
Sbjct: 397 RELARSTDEFNGAQLKAVTVEAGMIALRNGKSIIKHEDFVEAISEVQARKSKSVNFYA 454
>SGD|S000005643 [details] [associations]
symbol:RPT5 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005643 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006948 GO:GO:0006511 GO:GO:0017111 EMBL:X90518 EMBL:X94335
GO:GO:0045899 GeneTree:ENSGT00560000077230 GO:GO:0070682
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
GO:GO:0008540 PDB:4B4T PDBsum:4B4T OMA:GALMYGP OrthoDB:EOG40VZZ2
EMBL:X73569 EMBL:Z75025 PIR:S46605 RefSeq:NP_014760.3
RefSeq:NP_014762.3 ProteinModelPortal:P33297 SMR:P33297
DIP:DIP-1590N IntAct:P33297 MINT:MINT-383887 STRING:P33297
PaxDb:P33297 PeptideAtlas:P33297 EnsemblFungi:YOR117W GeneID:854284
GeneID:854286 KEGG:sce:YOR117W KEGG:sce:YOR119C KO:K07178
NextBio:976260 Genevestigator:P33297 GermOnline:YOR117W
Uniprot:P33297
Length = 434
Score = 1453 (516.5 bits), Expect = 7.9e-149, P = 7.9e-149
Identities = 285/427 (66%), Positives = 346/427 (81%)
Query: 2 ATAMVEDPNLEDDQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXX 61
A + D L D ++ +++ ++ ++LLDNEIR+ + ELQR + E +
Sbjct: 9 AQTLPGDDEL-DQEILNLSTQELQTRAKLLDNEIRIFRSELQRLSHENNVMLEKIKDNKE 67
Query: 62 XXXXXXXLPYLVGNIVEILEMNP-ED----EAEEDGANIDLDSQRKGKCVVLKTSTRQTI 116
LPYLV N+VE+++MN ED E+ G N++LD+ GK V+KTS+RQT+
Sbjct: 68 KIKNNRQLPYLVANVVEVMDMNEIEDKENSESTTQGGNVNLDNTAVGKAAVVKTSSRQTV 127
Query: 117 FLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLE 176
FLP+VGLVDPDKLKP DLVGVNKDSYLILDTLPSE+DSRVKAMEVDEKPTE Y+D+GGL+
Sbjct: 128 FLPMVGLVDPDKLKPNDLVGVNKDSYLILDTLPSEFDSRVKAMEVDEKPTETYSDVGGLD 187
Query: 177 KQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLA 236
KQI+ELVEAIVLPM ++F+ +G+R PKG L+YGPPGTGKTL+ARACAAQTNATFLKLA
Sbjct: 188 KQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGTGKTLLARACAAQTNATFLKLA 247
Query: 237 GPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLE 296
PQLVQM+IG+GAKLVRDAF LAKEK+P IIFIDE+DAIGTKRFDSE SGDREVQRTMLE
Sbjct: 248 APQLVQMYIGEGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEKSGDREVQRTMLE 307
Query: 297 LLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRK 356
LLNQLDGFSSDDR+KV+AATNR D+LDPAL+RSGRLDRKIEFP P+E++RA+ILQIHSRK
Sbjct: 308 LLNQLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSEDSRAQILQIHSRK 367
Query: 357 MNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 416
M D+N++ELARSTD+FNGAQLKAV VEAGM+ALR + V HEDF EGI +VQA+K
Sbjct: 368 MTTDDDINWQELARSTDEFNGAQLKAVTVEAGMIALRNGQSSVKHEDFVEGISEVQARKS 427
Query: 417 ASLNYYA 423
S+++YA
Sbjct: 428 KSVSFYA 434
>POMBASE|SPAC3A11.12c [details] [associations]
symbol:rpt5 "19S proteasome regulatory subunit Rpt5
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPAC3A11.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 GO:GO:0008540
OMA:GALMYGP EMBL:AB012136 PIR:T11634 RefSeq:XP_001713083.1
ProteinModelPortal:O14126 STRING:O14126 PRIDE:O14126
EnsemblFungi:SPAC3A11.12c.1 GeneID:3361462 KEGG:spo:SPAC3A11.12c
OrthoDB:EOG40VZZ2 NextBio:20811506 Uniprot:O14126
Length = 438
Score = 1439 (511.6 bits), Expect = 2.4e-147, P = 2.4e-147
Identities = 276/411 (67%), Positives = 337/411 (81%)
Query: 13 DDQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYL 72
+ ++ + D++ +RLL+N+I+V+K E QR E + LPYL
Sbjct: 28 EQEILAAGIDELNSRTRLLENDIKVMKSEFQRLTHEKSTMLEKIKENQEKISNNKMLPYL 87
Query: 73 VGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPG 132
VGN+VEIL+M P++ ++ AN + ++ R GK V+KTSTRQTIFLP++GLV+P++L PG
Sbjct: 88 VGNVVEILDMQPDEVDVQESANQNSEATRVGKSAVIKTSTRQTIFLPLIGLVEPEELHPG 147
Query: 133 DLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTH 192
DL+GVNKDSYLI+D LPSEYDSRVKAMEVDEKPTE Y+DIGGL KQI+EL EAIVLPM
Sbjct: 148 DLIGVNKDSYLIIDKLPSEYDSRVKAMEVDEKPTERYSDIGGLSKQIEELFEAIVLPMQQ 207
Query: 193 KERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV 252
++F+KLGV+PPKG L++GPPGTGKTL+ARACAAQ+NATFLKLA PQLVQMFIGDGAKLV
Sbjct: 208 ADKFRKLGVKPPKGCLMFGPPGTGKTLLARACAAQSNATFLKLAAPQLVQMFIGDGAKLV 267
Query: 253 RDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKV 312
RDAF LAKEKSP IIFIDE+DAIGTKRFDSE +GDREVQRTMLELLNQLDGFSSDDR+KV
Sbjct: 268 RDAFALAKEKSPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSDDRVKV 327
Query: 313 IAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARST 372
IAATNR D LDPAL+RSGRLDRK+EFP P EEAR IL+IHSRKM + D+N+EELARST
Sbjct: 328 IAATNRVDTLDPALLRSGRLDRKLEFPLPNEEARVGILRIHSRKMAIDDDINWEELARST 387
Query: 373 DDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 423
D++NGA LK+VCVEAGM+ALR+ T++NHE F +GI++VQ +K +L Y+A
Sbjct: 388 DEYNGAMLKSVCVEAGMIALRQGDTKINHEHFMDGILEVQMRKSKTLQYFA 438
>UNIPROTKB|O42587 [details] [associations]
symbol:psmc3-a "26S protease regulatory subunit 6A-A"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 CTD:4913 TIGRFAMs:TIGR01242 EMBL:Y10461
RefSeq:NP_001080249.1 UniGene:Xl.12803 ProteinModelPortal:O42587
PRIDE:O42587 GeneID:379941 KEGG:xla:379941 Xenbase:XB-GENE-962533
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 Uniprot:O42587
Length = 405
Score = 1430 (508.4 bits), Expect = 2.2e-146, P = 2.2e-146
Identities = 278/385 (72%), Positives = 324/385 (84%)
Query: 14 DQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLV 73
+++ M+ ++I++ +RLLD+EI+++K E+ R EL + LPYLV
Sbjct: 15 EEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMRDKIKENSEKIKVNKTLPYLV 74
Query: 74 GNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGD 133
N++E+L+++P D+ EEDGANIDLDSQRKGKC V+KTSTRQT FLPV+GLVD +KLKPGD
Sbjct: 75 SNVIELLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGD 133
Query: 134 LVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHK 193
LVGVNKDSYLIL+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQIQELVEAIVLPM HK
Sbjct: 134 LVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHK 193
Query: 194 ERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVR 253
E+F+ LG++PPKGVL+YGPPGTGKTL+ARACAAQT ATFLKLAGPQLVQMFIGDGAKLVR
Sbjct: 194 EKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVR 253
Query: 254 DAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVI 313
DAF LAKEK+P IIFIDE+DAIGTKRFDSE +GDREVQRTMLELLNQLDGF + ++KVI
Sbjct: 254 DAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNMQVKVI 313
Query: 314 AATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTD 373
AATNR DILDPAL+RSGRLDRKIEFP P EEARARI+QIHSRKMNV PDVN+EELAR
Sbjct: 314 AATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCPT 373
Query: 374 DFNGAQLKAVCVEAGMLALRRDATE 398
K VEAGM+ALRR ATE
Sbjct: 374 ISMALSAKQFGVEAGMIALRRGATE 398
>UNIPROTKB|F1P3L9 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
Length = 389
Score = 1405 (499.6 bits), Expect = 9.6e-144, P = 9.6e-144
Identities = 278/389 (71%), Positives = 322/389 (82%)
Query: 36 RVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPE-DEAEEDGAN 94
+++K E+ R EL + LPYLV N++E ++ E E G+
Sbjct: 2 QIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIEERSVHHFCQEGEGIGSP 61
Query: 95 IDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDS 154
+ S++K + L+ + QT FLPV+GLVD +KLKPGDLVGVNKDSYLIL+TLP+EYDS
Sbjct: 62 LIYTSRKKEENG-LELTNSQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDS 120
Query: 155 RVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPG 214
RVKAMEVDE+PTE Y+DIGGL+KQIQELVEAIVLPM HKE+F+ LG++PPKGVL+YGPPG
Sbjct: 121 RVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPG 180
Query: 215 TGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDA 274
TGKTL+ARACAAQT ATFLKLAGPQLVQMFIGDGAKLVRDAF LAKEK+P IIFIDE+DA
Sbjct: 181 TGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDA 240
Query: 275 IGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDR 334
IGTKRFDSE +GDREVQRTMLELLNQLDGF + ++KVIAATNR DILDPAL+RSGRLDR
Sbjct: 241 IGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDR 300
Query: 335 KIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 394
KIEFP P EEARARI+QIHSRKMNV PDVN+EELAR TDDFNGAQ KAVCVEAGM+ALRR
Sbjct: 301 KIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRR 360
Query: 395 DATEVNHEDFNEGIIQVQAKKKASLNYYA 423
ATE+ HED+ EGI++VQAKKKA+L YYA
Sbjct: 361 GATELTHEDYMEGILEVQAKKKANLQYYA 389
>UNIPROTKB|F1NDQ1 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
Length = 385
Score = 1396 (496.5 bits), Expect = 8.6e-143, P = 8.6e-143
Identities = 277/389 (71%), Positives = 318/389 (81%)
Query: 36 RVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEE-DGAN 94
+++K E+ R EL + LPYLV N++E E + +E +G
Sbjct: 1 QIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIE--ERSVHHFCQEGEGIG 58
Query: 95 IDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDS 154
L +C + S +T FLPV+GLVD +KLKPGDLVGVNKDSYLIL+TLP+EYDS
Sbjct: 59 SPLVIGDMARCQTVYDS--ETYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDS 116
Query: 155 RVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPG 214
RVKAMEVDE+PTE Y+DIGGL+KQIQELVEAIVLPM HKE+F+ LG++PPKGVL+YGPPG
Sbjct: 117 RVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPG 176
Query: 215 TGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDA 274
TGKTL+ARACAAQT ATFLKLAGPQLVQMFIGDGAKLVRDAF LAKEK+P IIFIDE+DA
Sbjct: 177 TGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDA 236
Query: 275 IGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDR 334
IGTKRFDSE +GDREVQRTMLELLNQLDGF + ++KVIAATNR DILDPAL+RSGRLDR
Sbjct: 237 IGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDR 296
Query: 335 KIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 394
KIEFP P EEARARI+QIHSRKMNV PDVN+EELAR TDDFNGAQ KAVCVEAGM+ALRR
Sbjct: 297 KIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRR 356
Query: 395 DATEVNHEDFNEGIIQVQAKKKASLNYYA 423
ATE+ HED+ EGI++VQAKKKA+L YYA
Sbjct: 357 GATELTHEDYMEGILEVQAKKKANLQYYA 385
>UNIPROTKB|E9PKD5 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:AC090559 HGNC:HGNC:9549 ChiTaRS:PSMC3
IPI:IPI00978735 ProteinModelPortal:E9PKD5 SMR:E9PKD5 PRIDE:E9PKD5
Ensembl:ENST00000524447 ArrayExpress:E9PKD5 Bgee:E9PKD5
Uniprot:E9PKD5
Length = 294
Score = 680 (244.4 bits), Expect = 2.6e-113, Sum P(2) = 2.6e-113
Identities = 131/154 (85%), Positives = 144/154 (93%)
Query: 181 ELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL 240
ELVEAIVLPM HKE+F+ LG++PPKGVL+YGPPGTGKTL+ARACAAQT ATFLKLAGPQL
Sbjct: 141 ELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQL 200
Query: 241 VQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300
VQMFIGDGAKLVRDAF LAKEK+P IIFIDE+DAIGTKRFDSE +GDREVQRTMLELLNQ
Sbjct: 201 VQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQ 260
Query: 301 LDGFSSDDRIKVIAATNRADILDPALMRSGRLDR 334
LDGF + ++KVIAATNR DILDPAL+RSGRLDR
Sbjct: 261 LDGFQPNTQVKVIAATNRVDILDPALLRSGRLDR 294
Score = 458 (166.3 bits), Expect = 2.6e-113, Sum P(2) = 2.6e-113
Identities = 88/145 (60%), Positives = 113/145 (77%)
Query: 19 MTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVE 78
M+ ++I++ +RLLD+EI+++K E+ R EL + LPYLV N++E
Sbjct: 1 MSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIE 60
Query: 79 ILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVN 138
+L+++P D+ EEDGANIDLDSQRKGKC V+KTSTRQT FLPV+GLVD +KLKPGDLVGVN
Sbjct: 61 LLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVN 119
Query: 139 KDSYLILDTLPSEYDSRVKAMEVDE 163
KDSYLIL+TLP+EYDSRVKAME+ E
Sbjct: 120 KDSYLILETLPTEYDSRVKAMELVE 144
Score = 39 (18.8 bits), Expect = 4.2e-69, Sum P(2) = 4.2e-69
Identities = 11/64 (17%), Positives = 28/64 (43%)
Query: 133 DLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTH 192
D + N + + TLP + ++ ++VD P + D ++ Q + V+ +
Sbjct: 36 DKIKENSEKIKVNKTLPYLVSNVIELLDVD--PNDQEEDGANIDLDSQRKGKCAVIKTST 93
Query: 193 KERF 196
++ +
Sbjct: 94 RQTY 97
>UNIPROTKB|E9PMD8 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR003959
Pfam:PF00004 GO:GO:0005524 GO:GO:0001824 EMBL:AC090559
HGNC:HGNC:9549 ChiTaRS:PSMC3 IPI:IPI00978171 SMR:E9PMD8
Ensembl:ENST00000530651 Ensembl:ENST00000530887 Uniprot:E9PMD8
Length = 260
Score = 996 (355.7 bits), Expect = 2.1e-100, P = 2.1e-100
Identities = 189/261 (72%), Positives = 224/261 (85%)
Query: 19 MTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVE 78
M+ ++I++ +RLLD+EI+++K E+ R EL + LPYLV N++E
Sbjct: 1 MSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIE 60
Query: 79 ILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVN 138
+L+++P D+ EEDGANIDLDSQRKGKC V+KTSTRQT FLPV+GLVD +KLKPGDLVGVN
Sbjct: 61 LLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVN 119
Query: 139 KDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQK 198
KDSYLIL+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQIQELVEAIVLPM HKE+F+
Sbjct: 120 KDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFEN 179
Query: 199 LGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQL 258
LG++PPKGVL+YGPPGTGKTL+ARACAAQT ATFLKLAGPQLVQMFIGDGAKLVRDAF L
Sbjct: 180 LGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFAL 239
Query: 259 AKEKSPCIIFIDEIDAIGTKR 279
AKEK+P IIFIDE+DAIGTKR
Sbjct: 240 AKEKAPSIIFIDELDAIGTKR 260
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 897 (320.8 bits), Expect = 1.1e-93, Sum P(2) = 1.1e-93
Identities = 174/328 (53%), Positives = 234/328 (71%)
Query: 92 GANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSE 151
G +D +RK VV+K+ST + + V V+PD L PG V +N+ + ++D LP
Sbjct: 95 GTVVDKVGERK---VVVKSSTGPSFLVNVSHFVNPDDLAPGKRVCLNQQTLTVVDVLPEN 151
Query: 152 YDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYG 211
D R KAMEVDE+P Y DIGGLEKQ+QE+ E + LP+ H E F+K+G+ PPKG+LLYG
Sbjct: 152 KDYRAKAMEVDERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYG 211
Query: 212 PPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDE 271
PPGTGKTL+A+A A +TNATF+++ G +LV+ FIG+GA LV+D F+LAKEK+P IIFIDE
Sbjct: 212 PPGTGKTLLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDE 271
Query: 272 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGR 331
IDAI KR D+ GDREVQRT+++LL ++DGF + +K+I ATNR DILDPA++R GR
Sbjct: 272 IDAIAAKRTDALTGGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGR 331
Query: 332 LDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLA 391
DR IE P P E+ R IL+IH+RKMN+ DVN EE+A+ T+ GA+LKA+C EAGM A
Sbjct: 332 FDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNA 391
Query: 392 LRRDATEVNHEDFNEGIIQVQAKKKASL 419
+R V +DF + + ++ KKK +
Sbjct: 392 IRELRDYVTMDDFRKAVEKIMEKKKVKV 419
Score = 55 (24.4 bits), Expect = 1.1e-93, Sum P(2) = 1.1e-93
Identities = 13/45 (28%), Positives = 28/45 (62%)
Query: 7 EDPNLEDDQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDS 51
++ NL++D L +++ +R+ + E R+LK EL++ LE ++
Sbjct: 30 DNSNLKNDLLK----EELQEKARIAELESRILKLELEKKELEREN 70
>UNIPROTKB|E9PN50 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524 EMBL:AC090559
HGNC:HGNC:9549 ChiTaRS:PSMC3 IPI:IPI00979951
ProteinModelPortal:E9PN50 SMR:E9PN50 Ensembl:ENST00000531051
ArrayExpress:E9PN50 Bgee:E9PN50 Uniprot:E9PN50
Length = 239
Score = 661 (237.7 bits), Expect = 5.0e-89, Sum P(2) = 5.0e-89
Identities = 126/151 (83%), Positives = 140/151 (92%)
Query: 129 LKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVL 188
+K GVNKDSYLIL+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQIQELVEAIVL
Sbjct: 89 IKTSTRQGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVL 148
Query: 189 PMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDG 248
PM HKE+F+ LG++PPKGVL+YGPPGTGKTL+ARACAAQT ATFLKLAGPQLVQMFIGDG
Sbjct: 149 PMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDG 208
Query: 249 AKLVRDAFQLAKEKSPCIIFIDEIDAIGTKR 279
AKLVRDAF LAKEK+P IIFIDE+DAIGTKR
Sbjct: 209 AKLVRDAFALAKEKAPSIIFIDELDAIGTKR 239
Score = 247 (92.0 bits), Expect = 5.0e-89, Sum P(2) = 5.0e-89
Identities = 47/98 (47%), Positives = 68/98 (69%)
Query: 19 MTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVE 78
M+ ++I++ +RLLD+EI+++K E+ R EL + LPYLV N++E
Sbjct: 1 MSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIE 60
Query: 79 ILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTI 116
+L+++P D+ EEDGANIDLDSQRKGKC V+KTSTRQ +
Sbjct: 61 LLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQGV 97
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 853 (305.3 bits), Expect = 3.0e-85, P = 3.0e-85
Identities = 160/310 (51%), Positives = 225/310 (72%)
Query: 107 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 166
++ TS ++ ++ VD D L+PG V +N + ++ L + D V M+V++ P
Sbjct: 121 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 180
Query: 167 EDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAA 226
E Y DIGGL+ QIQE+ E++ LP+TH E ++++G++PPKGV+LYGPPGTGKTL+A+A A
Sbjct: 181 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 240
Query: 227 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSG 286
QT+ATFL++ G +L+Q ++GDG KLVR+ F++A+E +P I+FIDEIDAIGTKR+DS G
Sbjct: 241 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGG 300
Query: 287 DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 346
+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIEFP P E+ +
Sbjct: 301 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 360
Query: 347 ARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 406
RI QIH+ +M + DV +EL + DD +GA +KA+C EAG++ALR +V +EDF +
Sbjct: 361 KRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 420
Query: 407 GIIQVQAKKK 416
V KK+
Sbjct: 421 SKENVLYKKQ 430
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 853 (305.3 bits), Expect = 3.0e-85, P = 3.0e-85
Identities = 160/310 (51%), Positives = 225/310 (72%)
Query: 107 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 166
++ TS ++ ++ VD D L+PG V +N + ++ L + D V M+V++ P
Sbjct: 120 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 179
Query: 167 EDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAA 226
E Y DIGGL+ QIQE+ E++ LP+TH E ++++G++PPKGV+LYGPPGTGKTL+A+A A
Sbjct: 180 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 239
Query: 227 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSG 286
QT+ATFL++ G +L+Q ++GDG KLVR+ F++A+E +P I+FIDEIDAIGTKR+DS G
Sbjct: 240 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGG 299
Query: 287 DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 346
+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIEFP P E+ +
Sbjct: 300 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 359
Query: 347 ARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 406
RI QIH+ +M + DV +EL + DD +GA +KA+C EAG++ALR +V +EDF +
Sbjct: 360 KRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 419
Query: 407 GIIQVQAKKK 416
V KK+
Sbjct: 420 SKENVLYKKQ 429
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 852 (305.0 bits), Expect = 3.8e-85, P = 3.8e-85
Identities = 168/347 (48%), Positives = 235/347 (67%)
Query: 82 MNPEDE-AEEDGANID-----------LDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKL 129
+ P++E AEED + +D L+ ++ +S ++ ++ VD D+L
Sbjct: 88 LKPQEEKAEEDRSKVDDLRGTPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQL 147
Query: 130 KPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLP 189
+PG + ++ ++ L E D V M+V++ P E Y DIGGLE QIQE+ EA+ LP
Sbjct: 148 EPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELP 207
Query: 190 MTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGA 249
+TH E ++ +G++PPKGV+LYG PGTGKTL+A+A A T+ATFL++ G +L+Q ++GDG
Sbjct: 208 LTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGP 267
Query: 250 KLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDR 309
KLVR+ F++A + SP I+FIDEIDA+GTKR+D+ G+RE+QRTMLELLNQLDGF S
Sbjct: 268 KLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGD 327
Query: 310 IKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELA 369
+KVI ATNR + LDPAL+R GR+DRKIEFP P + R RI QIH+ KM + DVN EE
Sbjct: 328 VKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLSEDVNLEEFV 387
Query: 370 RSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 416
+ D+F+GA +KA+C EAG+LALR +V H DF + +V KKK
Sbjct: 388 MTKDEFSGADIKAICTEAGLLALRERRMKVTHPDFKKAKEKVMFKKK 434
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 851 (304.6 bits), Expect = 4.9e-85, P = 4.9e-85
Identities = 158/310 (50%), Positives = 225/310 (72%)
Query: 107 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 166
++ TS ++ ++ VD D+L+PG V +N + ++ L + D V M++++ P
Sbjct: 121 IVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQ 180
Query: 167 EDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAA 226
E Y DIGGL+ QIQE+ E++ LP+TH E ++++G++PPKGV+LYGPPGTGKTL+A+A A
Sbjct: 181 ETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 240
Query: 227 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSG 286
QT+ATFL++ G +L+Q ++GDG KLVR+ F++A+E +P I+FIDEIDA+GTKR+DS G
Sbjct: 241 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGG 300
Query: 287 DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 346
+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIEFP P E+ +
Sbjct: 301 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 360
Query: 347 ARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 406
RI IH+ +M + DVN EL + DD +GA +KA+C EAG++ALR +V +EDF +
Sbjct: 361 RRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 420
Query: 407 GIIQVQAKKK 416
V +KK
Sbjct: 421 SKESVLYRKK 430
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 850 (304.3 bits), Expect = 6.2e-85, P = 6.2e-85
Identities = 159/310 (51%), Positives = 225/310 (72%)
Query: 107 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 166
++ TS ++ ++ VD D L+PG V +N + ++ L + D V M+V++ P
Sbjct: 122 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 181
Query: 167 EDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAA 226
E Y DIGGL+ QIQE+ E++ LP+TH E ++++G++PPKGV+LYGPPGTGKTL+A+A A
Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 241
Query: 227 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSG 286
QT+ATFL++ G +L+Q ++GDG KLVR+ F++A+E +P I+FIDEIDAIGTKR+DS G
Sbjct: 242 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGG 301
Query: 287 DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 346
+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIEFP P E+ +
Sbjct: 302 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 361
Query: 347 ARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 406
RI QIH+ +M + DV ++L + DD +GA +KA+C EAG++ALR +V +EDF +
Sbjct: 362 KRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 421
Query: 407 GIIQVQAKKK 416
V KK+
Sbjct: 422 SKENVLYKKQ 431
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 850 (304.3 bits), Expect = 6.2e-85, P = 6.2e-85
Identities = 159/310 (51%), Positives = 225/310 (72%)
Query: 107 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 166
++ TS ++ ++ VD D L+PG V +N + ++ L + D V M+V++ P
Sbjct: 122 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 181
Query: 167 EDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAA 226
E Y DIGGL+ QIQE+ E++ LP+TH E ++++G++PPKGV+LYGPPGTGKTL+A+A A
Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 241
Query: 227 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSG 286
QT+ATFL++ G +L+Q ++GDG KLVR+ F++A+E +P I+FIDEIDAIGTKR+DS G
Sbjct: 242 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGG 301
Query: 287 DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 346
+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIEFP P E+ +
Sbjct: 302 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 361
Query: 347 ARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 406
RI QIH+ +M + DV ++L + DD +GA +KA+C EAG++ALR +V +EDF +
Sbjct: 362 KRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 421
Query: 407 GIIQVQAKKK 416
V KK+
Sbjct: 422 SKENVLYKKQ 431
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 850 (304.3 bits), Expect = 6.2e-85, P = 6.2e-85
Identities = 159/310 (51%), Positives = 225/310 (72%)
Query: 107 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 166
++ TS ++ ++ VD D L+PG V +N + ++ L + D V M+V++ P
Sbjct: 49 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 108
Query: 167 EDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAA 226
E Y DIGGL+ QIQE+ E++ LP+TH E ++++G++PPKGV+LYGPPGTGKTL+A+A A
Sbjct: 109 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 168
Query: 227 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSG 286
QT+ATFL++ G +L+Q ++GDG KLVR+ F++A+E +P I+FIDEIDAIGTKR+DS G
Sbjct: 169 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGG 228
Query: 287 DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 346
+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIEFP P E+ +
Sbjct: 229 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 288
Query: 347 ARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 406
RI QIH+ +M + DV ++L + DD +GA +KA+C EAG++ALR +V +EDF +
Sbjct: 289 KRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 348
Query: 407 GIIQVQAKKK 416
V KK+
Sbjct: 349 SKENVLYKKQ 358
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 850 (304.3 bits), Expect = 6.2e-85, P = 6.2e-85
Identities = 159/310 (51%), Positives = 225/310 (72%)
Query: 107 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 166
++ TS ++ ++ VD D L+PG V +N + ++ L + D V M+V++ P
Sbjct: 122 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 181
Query: 167 EDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAA 226
E Y DIGGL+ QIQE+ E++ LP+TH E ++++G++PPKGV+LYGPPGTGKTL+A+A A
Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 241
Query: 227 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSG 286
QT+ATFL++ G +L+Q ++GDG KLVR+ F++A+E +P I+FIDEIDAIGTKR+DS G
Sbjct: 242 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGG 301
Query: 287 DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 346
+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIEFP P E+ +
Sbjct: 302 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 361
Query: 347 ARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 406
RI QIH+ +M + DV ++L + DD +GA +KA+C EAG++ALR +V +EDF +
Sbjct: 362 KRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 421
Query: 407 GIIQVQAKKK 416
V KK+
Sbjct: 422 SKENVLYKKQ 431
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 850 (304.3 bits), Expect = 6.2e-85, P = 6.2e-85
Identities = 159/310 (51%), Positives = 225/310 (72%)
Query: 107 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 166
++ TS ++ ++ VD D L+PG V +N + ++ L + D V M+V++ P
Sbjct: 122 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 181
Query: 167 EDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAA 226
E Y DIGGL+ QIQE+ E++ LP+TH E ++++G++PPKGV+LYGPPGTGKTL+A+A A
Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 241
Query: 227 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSG 286
QT+ATFL++ G +L+Q ++GDG KLVR+ F++A+E +P I+FIDEIDAIGTKR+DS G
Sbjct: 242 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGG 301
Query: 287 DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 346
+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIEFP P E+ +
Sbjct: 302 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 361
Query: 347 ARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 406
RI QIH+ +M + DV ++L + DD +GA +KA+C EAG++ALR +V +EDF +
Sbjct: 362 KRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 421
Query: 407 GIIQVQAKKK 416
V KK+
Sbjct: 422 SKENVLYKKQ 431
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 850 (304.3 bits), Expect = 6.2e-85, P = 6.2e-85
Identities = 159/310 (51%), Positives = 225/310 (72%)
Query: 107 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 166
++ TS ++ ++ VD D L+PG V +N + ++ L + D V M+V++ P
Sbjct: 122 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 181
Query: 167 EDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAA 226
E Y DIGGL+ QIQE+ E++ LP+TH E ++++G++PPKGV+LYGPPGTGKTL+A+A A
Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 241
Query: 227 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSG 286
QT+ATFL++ G +L+Q ++GDG KLVR+ F++A+E +P I+FIDEIDAIGTKR+DS G
Sbjct: 242 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGG 301
Query: 287 DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 346
+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIEFP P E+ +
Sbjct: 302 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 361
Query: 347 ARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 406
RI QIH+ +M + DV ++L + DD +GA +KA+C EAG++ALR +V +EDF +
Sbjct: 362 KRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 421
Query: 407 GIIQVQAKKK 416
V KK+
Sbjct: 422 SKENVLYKKQ 431
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 850 (304.3 bits), Expect = 6.2e-85, P = 6.2e-85
Identities = 159/310 (51%), Positives = 225/310 (72%)
Query: 107 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 166
++ TS ++ ++ VD D L+PG V +N + ++ L + D V M+V++ P
Sbjct: 122 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 181
Query: 167 EDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAA 226
E Y DIGGL+ QIQE+ E++ LP+TH E ++++G++PPKGV+LYGPPGTGKTL+A+A A
Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 241
Query: 227 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSG 286
QT+ATFL++ G +L+Q ++GDG KLVR+ F++A+E +P I+FIDEIDAIGTKR+DS G
Sbjct: 242 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGG 301
Query: 287 DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 346
+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIEFP P E+ +
Sbjct: 302 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 361
Query: 347 ARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 406
RI QIH+ +M + DV ++L + DD +GA +KA+C EAG++ALR +V +EDF +
Sbjct: 362 KRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 421
Query: 407 GIIQVQAKKK 416
V KK+
Sbjct: 422 SKENVLYKKQ 431
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 850 (304.3 bits), Expect = 6.2e-85, P = 6.2e-85
Identities = 168/347 (48%), Positives = 235/347 (67%)
Query: 82 MNPEDE-AEEDGANID-----------LDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKL 129
+ P++E AEED + +D L+ ++ +S ++ ++ VD D+L
Sbjct: 88 LKPQEEKAEEDRSKVDDLRGTPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQL 147
Query: 130 KPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLP 189
+PG + ++ ++ L E D V M+V++ P E Y DIGGLE QIQE+ EA+ LP
Sbjct: 148 EPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELP 207
Query: 190 MTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGA 249
+TH E ++ +G++PPKGV+LYG PGTGKTL+A+A A T+ATFL++ G +L+Q ++GDG
Sbjct: 208 LTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGP 267
Query: 250 KLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDR 309
KLVR+ F++A + SP I+FIDEIDA+GTKR+D+ G+RE+QRTMLELLNQLDGF S
Sbjct: 268 KLVRELFRVADDLSPSIVFIDEIDAVGTKRYDANSGGEREIQRTMLELLNQLDGFDSRGD 327
Query: 310 IKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELA 369
+KVI ATNR + LDPAL+R GR+DRKIEFP P + R RI QIH+ KM + DVN EE
Sbjct: 328 VKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLAEDVNLEEFV 387
Query: 370 RSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 416
+ D+F+GA +KA+C EAG+LALR +V H DF + +V KKK
Sbjct: 388 MTKDEFSGADIKAICTEAGLLALRERRMKVTHVDFKKAKEKVMFKKK 434
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 845 (302.5 bits), Expect = 2.1e-84, P = 2.1e-84
Identities = 159/310 (51%), Positives = 225/310 (72%)
Query: 107 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 166
++ TS ++ ++ VD D L+PG V +N + ++ L + D V M+V++ P
Sbjct: 122 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 181
Query: 167 EDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAA 226
E Y DIGGL+ QIQE+ E++ LP+TH E ++++G++PPKGV+LYG PGTGKTL+A+A A
Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVAN 241
Query: 227 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSG 286
QT+ATFL++ G +L+Q ++GDG KLVR+ F++A+E +P I+FIDEIDAIGTKR+DS G
Sbjct: 242 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGG 301
Query: 287 DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 346
+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIEFP P E+ +
Sbjct: 302 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 361
Query: 347 ARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 406
RI QIH+ +M V DV+ ++L + DD +GA +KA+C EAG++ALR +V +EDF +
Sbjct: 362 RRIFQIHTSRMTVAEDVSLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 421
Query: 407 GIIQVQAKKK 416
V KK+
Sbjct: 422 SKENVLYKKQ 431
>DICTYBASE|DDB_G0270784 [details] [associations]
symbol:psmC1 "TAT binding protein alpha"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0270784 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0030587 GO:GO:0000910 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 HSSP:Q9WZ49 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03062 OMA:FIRNQER RefSeq:XP_646726.1 ProteinModelPortal:Q55BV5
STRING:Q55BV5 PRIDE:Q55BV5 EnsemblProtists:DDB0232964
GeneID:8617698 KEGG:ddi:DDB_G0270784 ProtClustDB:PTZ00361
Uniprot:Q55BV5
Length = 439
Score = 844 (302.2 bits), Expect = 2.7e-84, P = 2.7e-84
Identities = 158/301 (52%), Positives = 219/301 (72%)
Query: 117 FLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLE 176
++ ++ VD KL G V +N + ++ + E D V M+V++ PTE Y+DIGGLE
Sbjct: 131 YVRIMSFVDKSKLYLGATVLLNNKTLSVVGVIDGEVDPMVNVMKVEKAPTESYSDIGGLE 190
Query: 177 KQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLA 236
Q+QE+ EAI LP+TH E ++++G++PPKGV+LYG PGTGKTL+A+A A QT+ATFL++
Sbjct: 191 AQVQEMKEAIELPLTHPELYEEIGIKPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVV 250
Query: 237 GPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLE 296
G +L+Q ++GDG KLVR+ F++A E +P I+FIDEIDA+GTKR+DS+ G+RE+QRTMLE
Sbjct: 251 GSELIQKYLGDGPKLVRELFRVADECAPSIVFIDEIDAVGTKRYDSQSGGEREIQRTMLE 310
Query: 297 LLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRK 356
LLNQLDGF + +KVI ATNR + LDPAL+R GR+DRKIEFP P + + +I +IH+ K
Sbjct: 311 LLNQLDGFDARTDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDIKTKRKIFEIHTAK 370
Query: 357 MNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 416
MN+ DVN EE S DD +GA +KA+C E+G+LALR V H DF + +V +K
Sbjct: 371 MNLSEDVNLEEFVMSKDDLSGADIKAICTESGLLALRERRMRVTHTDFKKAKEKVLYRKT 430
Query: 417 A 417
A
Sbjct: 431 A 431
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 844 (302.2 bits), Expect = 2.7e-84, P = 2.7e-84
Identities = 156/300 (52%), Positives = 220/300 (73%)
Query: 107 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 166
++ TS ++ ++ VD D L+PG V +N + ++ L + D V M++++ P
Sbjct: 122 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKLEKAPQ 181
Query: 167 EDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAA 226
E Y DIGGL+ QIQE+ E++ LP+TH E ++++G++PPKGV+LYGPPGTGKTL+A+A A
Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 241
Query: 227 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSG 286
QT+ATFL++ G +L+Q ++GDG KLVR+ F++A+E P I+FIDEIDAIGTKR+DS G
Sbjct: 242 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTKRYDSNSGG 301
Query: 287 DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 346
+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIEFP P E+ +
Sbjct: 302 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 361
Query: 347 ARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 406
RI QIH+ +M + DV +EL + DD +GA +KA+C EAG++ALR +V +EDF +
Sbjct: 362 KRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 421
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 844 (302.2 bits), Expect = 2.7e-84, P = 2.7e-84
Identities = 159/310 (51%), Positives = 224/310 (72%)
Query: 107 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 166
++ TS ++ ++ VD D L+PG V +N + ++ L + D V M+V++ P
Sbjct: 122 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 181
Query: 167 EDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAA 226
E Y DIGGL+ QIQE+ E++ LP+TH E ++++G++PPKGV+LYG PGTGKTL+A+A A
Sbjct: 182 ETYADIGGLDSQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVAN 241
Query: 227 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSG 286
QT+ATFL++ G +L+Q ++GDG KLVR+ F++A+E +P I+FIDEIDAIGTKR+DS G
Sbjct: 242 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGG 301
Query: 287 DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 346
+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIEFP P E+ +
Sbjct: 302 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 361
Query: 347 ARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 406
RI QIH+ +M V DV ++L + DD +GA +KA+C EAG++ALR +V +EDF +
Sbjct: 362 RRIFQIHTSRMTVADDVTLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 421
Query: 407 GIIQVQAKKK 416
V KK+
Sbjct: 422 SKENVLYKKQ 431
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 839 (300.4 bits), Expect = 9.1e-84, P = 9.1e-84
Identities = 156/313 (49%), Positives = 223/313 (71%)
Query: 107 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 166
++ TS ++ ++ VD D L+PG V +N + ++ L E D V M+V++ P
Sbjct: 130 IIATSVGPEYYVNILSFVDKDLLEPGCSVLLNNKTNSVVGILLDEVDPLVSVMKVEKAPL 189
Query: 167 EDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAA 226
E Y DIGGLE QIQE+ EA+ LP+TH E ++ +G++PPKGV+LYGPPGTGKTL+A+A A
Sbjct: 190 ESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVAN 249
Query: 227 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSG 286
+T+ATFL++ G +L+Q ++GDG KLVR+ F++A+E +P I+FIDEIDA+GTKR+++ G
Sbjct: 250 ETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYEATSGG 309
Query: 287 DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 346
+RE+QRTMLELLNQLDGF S +KVI ATNR D LDPAL+R GR+DRKI+ P+P + +
Sbjct: 310 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKTK 369
Query: 347 ARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 406
RI QIH+ KM + PDV+ EE S D+ +GA +KA+C EAG+LALR ++ D +
Sbjct: 370 RRIFQIHTSKMTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLALRERRMKITQADLRK 429
Query: 407 GIIQVQAKKKASL 419
+ +KK ++
Sbjct: 430 ARDKALFQKKGNI 442
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 839 (300.4 bits), Expect = 9.1e-84, P = 9.1e-84
Identities = 156/313 (49%), Positives = 223/313 (71%)
Query: 107 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 166
++ TS ++ ++ VD D L+PG V +N + ++ L E D V M+V++ P
Sbjct: 130 IIATSVGPEYYVNILSFVDKDLLEPGCSVLLNNKTNSVVGILLDEVDPLVSVMKVEKAPL 189
Query: 167 EDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAA 226
E Y DIGGLE QIQE+ EA+ LP+TH E ++ +G++PPKGV+LYGPPGTGKTL+A+A A
Sbjct: 190 ESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVAN 249
Query: 227 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSG 286
+T+ATFL++ G +L+Q ++GDG KLVR+ F++A+E +P I+FIDEIDA+GTKR+++ G
Sbjct: 250 ETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYEATSGG 309
Query: 287 DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 346
+RE+QRTMLELLNQLDGF S +KVI ATNR D LDPAL+R GR+DRKI+ P+P + +
Sbjct: 310 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKTK 369
Query: 347 ARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 406
RI QIH+ KM + PDV+ EE S D+ +GA +KA+C EAG+LALR ++ D +
Sbjct: 370 RRIFQIHTSKMTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLALRERRMKITQADLRK 429
Query: 407 GIIQVQAKKKASL 419
+ +KK ++
Sbjct: 430 ARDKALFQKKGNI 442
>WB|WBGene00004502 [details] [associations]
symbol:rpt-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0000003 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER EMBL:FO080494 PIR:T31800
RefSeq:NP_504558.1 ProteinModelPortal:O16368 SMR:O16368
IntAct:O16368 MINT:MINT-210699 STRING:O16368 PaxDb:O16368
PRIDE:O16368 EnsemblMetazoa:F29G9.5.1 EnsemblMetazoa:F29G9.5.2
GeneID:178988 KEGG:cel:CELE_F29G9.5 UCSC:F29G9.5 CTD:178988
WormBase:F29G9.5 GeneTree:ENSGT00550000074818 InParanoid:O16368
NextBio:903424 Uniprot:O16368
Length = 443
Score = 837 (299.7 bits), Expect = 1.5e-83, P = 1.5e-83
Identities = 154/310 (49%), Positives = 225/310 (72%)
Query: 107 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 166
++ T+ ++ ++ VD ++L+PG V +N ++ ++ L + D V M++++ P
Sbjct: 125 IVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKAPQ 184
Query: 167 EDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAA 226
E Y D+GGL++QIQE+ EA+ LP+TH E ++++G+RPPKGV+LYG PGTGKTL+A+A A
Sbjct: 185 ETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAVAN 244
Query: 227 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSG 286
QT+ATFL++ G +L+Q ++GDG K+VR+ F++A+E +P I+FIDEIDA+GTKR+DS G
Sbjct: 245 QTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDSNSGG 304
Query: 287 DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 346
+RE+QRTMLELLNQLDGF S +KV+ ATNR + LDPAL+R GR+DRKIEFP P E+ +
Sbjct: 305 EREIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEKTK 364
Query: 347 ARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 406
RI QIH+ +M + +VN EE + D+ +GA +KA+C EAG+LALR V EDF +
Sbjct: 365 RRIFQIHTSRMTLGKEVNLEEFITAKDELSGADIKAMCTEAGLLALRERRMRVTMEDFQK 424
Query: 407 GIIQVQAKKK 416
V +KK
Sbjct: 425 SKENVLYRKK 434
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 796 (285.3 bits), Expect = 1.9e-81, Sum P(2) = 1.9e-81
Identities = 159/314 (50%), Positives = 220/314 (70%)
Query: 102 KGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEV 161
K K V++K + + +D KL P V + DSY++ LPS+ D V M+V
Sbjct: 94 KNK-VLVKVHPEGKYVVDIDKSIDITKLTPSTRVALRNDSYVLHLVLPSKVDPLVNLMKV 152
Query: 162 DEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMA 221
++ P Y+ IGGL++QI+E+ E I LP+ H E F+ LG+ PKGVLLYGPPGTGKTL+A
Sbjct: 153 EKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLA 212
Query: 222 RACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFD 281
RA A T+ TF++++G +LVQ +IG+G+++VR+ F +A+E +P IIF+DEID+IG+ R +
Sbjct: 213 RAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARME 272
Query: 282 S-EVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPH 340
S +GD EVQRTMLELLNQLDGF + ++IKV+ ATNR DILD AL+R GR+DRKIEFP+
Sbjct: 273 SGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPN 332
Query: 341 PTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVN 400
P EE+R IL+IHSRKMN+ ++ +++A + +GA+LKAVC EAGM ALR V
Sbjct: 333 PNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVT 392
Query: 401 HEDFNEGIIQVQAK 414
EDF + +V K
Sbjct: 393 QEDFEMAVAKVMKK 406
Score = 40 (19.1 bits), Expect = 1.9e-81, Sum P(2) = 1.9e-81
Identities = 7/13 (53%), Positives = 12/13 (92%)
Query: 31 LDNEIRVLKEELQ 43
L++ +R+L+EELQ
Sbjct: 64 LNSRVRMLREELQ 76
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 791 (283.5 bits), Expect = 2.5e-81, Sum P(2) = 2.5e-81
Identities = 161/329 (48%), Positives = 216/329 (65%)
Query: 87 EAEEDGANI-DLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLIL 145
+ E G+ + ++ K V++K + V +D + L G V + DSY +
Sbjct: 75 QLHEQGSYVGEVSKAMDKKKVLVKVHPEGKYVVDVDKSIDINSLNTGARVALRADSYALH 134
Query: 146 DTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPK 205
LP++ D V M V++ P Y +GGL+KQI+E+ E I LP+ H E F LG+ PK
Sbjct: 135 KLLPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPK 194
Query: 206 GVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPC 265
GVLL+GPPGTGKTL+ARA A T TF++++G +LVQ FIG+GA++VR+ F +A+E +P
Sbjct: 195 GVLLFGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS 254
Query: 266 IIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPA 325
IIF+DEID+IG+ R + GD EVQRTMLELLNQLDGF + IKVI ATNR DILDPA
Sbjct: 255 IIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPA 314
Query: 326 LMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCV 385
L+R GR+DRKIEFP P E+ARA IL+IHSRKMN+ +N ++A +GA++K+VC
Sbjct: 315 LLRPGRIDRKIEFPAPDEKARADILKIHSRKMNLMRGINMAKIAEQIPGASGAEVKSVCT 374
Query: 386 EAGMLALRRDATEVNHEDFNEGIIQVQAK 414
EAGM ALR V EDF + +V K
Sbjct: 375 EAGMFALRERRIHVTQEDFEMAVGKVMQK 403
Score = 44 (20.5 bits), Expect = 2.5e-81, Sum P(2) = 2.5e-81
Identities = 8/14 (57%), Positives = 13/14 (92%)
Query: 31 LDNEIRVLKEELQR 44
L+ ++R+LKEELQ+
Sbjct: 62 LNTKVRMLKEELQQ 75
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 794 (284.6 bits), Expect = 3.2e-81, Sum P(2) = 3.2e-81
Identities = 158/314 (50%), Positives = 220/314 (70%)
Query: 102 KGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEV 161
K K V++K + + +D K+ P V + DSY++ LPS+ D V M+V
Sbjct: 94 KNK-VLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKVDPLVNLMKV 152
Query: 162 DEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMA 221
++ P Y+ IGGL++QI+E+ E I LP+ H E F+ LG+ PKGVLLYGPPGTGKTL+A
Sbjct: 153 EKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLA 212
Query: 222 RACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFD 281
RA A T+ TF++++G +LVQ +IG+G+++VR+ F +A+E +P IIF+DEID+IG+ R +
Sbjct: 213 RAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARME 272
Query: 282 S-EVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPH 340
S +GD EVQRTMLELLNQLDGF + ++IKV+ ATNR DILD AL+R GR+DRKIEFP+
Sbjct: 273 SGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPN 332
Query: 341 PTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVN 400
P EE+R IL+IHSRKMN+ ++ +++A + +GA+LKAVC EAGM ALR V
Sbjct: 333 PNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVT 392
Query: 401 HEDFNEGIIQVQAK 414
EDF + +V K
Sbjct: 393 QEDFEMAVAKVMKK 406
Score = 40 (19.1 bits), Expect = 3.2e-81, Sum P(2) = 3.2e-81
Identities = 7/13 (53%), Positives = 12/13 (92%)
Query: 31 LDNEIRVLKEELQ 43
L++ +R+L+EELQ
Sbjct: 64 LNSRVRMLREELQ 76
>SGD|S000002165 [details] [associations]
symbol:RPT2 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IDA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IDA] [GO:0043171 "peptide
catabolic process" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002165 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0016887 GO:GO:0043171 GO:GO:0006511
GO:GO:0045732 EMBL:Z48432 GO:GO:0070682 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T KO:K03062 OMA:FIRNQER GeneTree:ENSGT00550000074818
OrthoDB:EOG4FN7S6 EMBL:X81070 EMBL:L17040 EMBL:Z74055 PIR:S46613
RefSeq:NP_010277.1 ProteinModelPortal:P40327 SMR:P40327
DIP:DIP-6282N IntAct:P40327 MINT:MINT-632695 STRING:P40327
PaxDb:P40327 PeptideAtlas:P40327 PRIDE:P40327 EnsemblFungi:YDL007W
GeneID:851557 KEGG:sce:YDL007W NextBio:968983 Genevestigator:P40327
GermOnline:YDL007W Uniprot:P40327
Length = 437
Score = 812 (290.9 bits), Expect = 6.6e-81, P = 6.6e-81
Identities = 153/309 (49%), Positives = 218/309 (70%)
Query: 107 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 166
++ + T ++ ++ VD + L+PG V ++ + I+ L + D V M++D+ PT
Sbjct: 119 IVTSPTMPDYYVSILSFVDKELLEPGCSVLLHHKTMSIVGVLQDDADPMVSVMKMDKSPT 178
Query: 167 EDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAA 226
E Y+DIGGLE QIQE+ E++ LP+TH E ++++G++PPKGV+LYG PGTGKTL+A+A A
Sbjct: 179 ESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVAN 238
Query: 227 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSG 286
QT+ATFL++ G +L+Q ++GDG +L R F++A E +P I+FIDEIDAIGTKR+DS G
Sbjct: 239 QTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRYDSNSGG 298
Query: 287 DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 346
+RE+QRTMLELLNQLDGF +KVI ATN+ + LDPAL+R GR+DRKI F +P +
Sbjct: 299 EREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDLSTK 358
Query: 347 ARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 406
+IL IH+ KMN+ DVN E L + DD +GA ++A+C EAG+LALR +V EDF +
Sbjct: 359 KKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQVTAEDFKQ 418
Query: 407 GIIQVQAKK 415
+V K
Sbjct: 419 AKERVMKNK 427
>DICTYBASE|DDB_G0289003 [details] [associations]
symbol:psmC4 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=ISS] [GO:0005838 "proteasome regulatory
particle" evidence=ISS] [GO:0004175 "endopeptidase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0289003 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GO:GO:0006508 GenomeReviews:CM000154_GR GO:GO:0006972
GO:GO:0004175 EMBL:AAFI02000129 GO:GO:0030163 GO:GO:0017111
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03063 OMA:DQTTNVK EMBL:L16578
PIR:JN0611 RefSeq:XP_636422.1 ProteinModelPortal:P34123 SMR:P34123
STRING:P34123 PRIDE:P34123 EnsemblProtists:DDB0191435
GeneID:8626913 KEGG:ddi:DDB_G0289003 ProtClustDB:PTZ00454
GO:GO:0005838 Uniprot:P34123
Length = 403
Score = 789 (282.8 bits), Expect = 2.2e-80, Sum P(2) = 2.2e-80
Identities = 147/316 (46%), Positives = 218/316 (68%)
Query: 107 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 166
++++++ T+ + ++ +D + LKP V + + S ++DTLP E DS + + DEKP+
Sbjct: 87 IVQSTSGSTLCVRILSTIDRELLKPSASVALQRHSNALVDTLPPESDSSIHLLGADEKPS 146
Query: 167 EDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAA 226
E Y+DIGG + Q QE+ EA+ LP+TH ++++G+ PP+GVLLYGPPGTGKT++A+A A
Sbjct: 147 ESYSDIGGGDIQKQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAH 206
Query: 227 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSG 286
T+A F+++ G + VQ ++G+G +LVRD F+LA+E SP IIFIDEIDAI TKRFD++
Sbjct: 207 HTSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTGA 266
Query: 287 DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 346
DREVQR ++ELLNQ+DGF +KVI ATNR D LDPAL+R GRLDRKIEFP P +
Sbjct: 267 DREVQRILMELLNQMDGFDVSVNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQK 326
Query: 347 ARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 406
I Q+ + KMN+ +V+ E+ D +GA+++++C EAGM A+R++ + +DF +
Sbjct: 327 RLIFQVITSKMNLSDEVDLEDYVSRPDKLSGAEIQSICQEAGMHAIRKNRYVILPKDFEK 386
Query: 407 GIIQVQAKKKASLNYY 422
G K N+Y
Sbjct: 387 GYKASIKKNTHEFNFY 402
Score = 37 (18.1 bits), Expect = 2.2e-80, Sum P(2) = 2.2e-80
Identities = 5/15 (33%), Positives = 12/15 (80%)
Query: 69 LPYLVGNIVEILEMN 83
+P L+G ++E+++ N
Sbjct: 70 VPLLIGQLLEMVDSN 84
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 788 (282.4 bits), Expect = 2.8e-80, Sum P(2) = 2.8e-80
Identities = 161/326 (49%), Positives = 215/326 (65%)
Query: 90 EDGANI-DLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTL 148
E G+++ ++ K V++K + V VD L G V + D+Y I + L
Sbjct: 94 EQGSHVGEVCKAMDKKKVLVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVL 153
Query: 149 PSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVL 208
PS+ D V M V++ P Y +GGL+ QI+E+ E I LP+ H E F LG+ PKGVL
Sbjct: 154 PSKVDPLVSLMMVEKVPDSTYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVL 213
Query: 209 LYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIF 268
LYGPPGTGKTL+ARA A T TF++++G +LVQ FIG+GA++VR+ F +A+E +P IIF
Sbjct: 214 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIF 273
Query: 269 IDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMR 328
+DEID+IG+ R + GD EVQRTMLELLNQLDGF + IKVI ATNR DILD AL+R
Sbjct: 274 MDEIDSIGSSRVEGSRGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLR 333
Query: 329 SGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAG 388
GR+DRKIEFP P E+ARA+IL+IHSRKMN+ + +++A +GA++K+VC EAG
Sbjct: 334 PGRIDRKIEFPAPDEKARAQILKIHSRKMNLMRGIRMDKIAEQIPGASGAEVKSVCTEAG 393
Query: 389 MLALRRDATEVNHEDFNEGIIQVQAK 414
M ALR V EDF + +V K
Sbjct: 394 MFALRERRIHVTQEDFEMAVGKVMQK 419
Score = 37 (18.1 bits), Expect = 2.8e-80, Sum P(2) = 2.8e-80
Identities = 7/25 (28%), Positives = 16/25 (64%)
Query: 18 SMTADDIVRASRLLDNEIRVLKEEL 42
S+ ++ + L+ ++R+LKEE+
Sbjct: 65 SINVRRLMAQQKELNGKVRLLKEEI 89
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 776 (278.2 bits), Expect = 3.6e-80, Sum P(2) = 3.6e-80
Identities = 158/320 (49%), Positives = 218/320 (68%)
Query: 102 KGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEV 161
K K V++K + + + VD KL P + +SY + LP++ D V M+V
Sbjct: 78 KNK-VLVKVNPEGKFVVDIDPTVDIAKLTPSTRAALKHESYTLHRILPNKIDPLVSLMKV 136
Query: 162 DEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMA 221
++ P Y+ +GGL+KQI+E+ E I LP+ H E F+ LG+ PKGVLLYGPPGTGKTL+A
Sbjct: 137 EKIPDSTYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLA 196
Query: 222 RACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFD 281
RA A T+ TF++++G +LVQ +IG+G+++VR+ F +A+E +P IIF+DEID+IG+ R +
Sbjct: 197 RAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSSRGE 256
Query: 282 S-EVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPH 340
S GD EVQRTMLELLNQLDGF S IKV+ TNR DILDPAL+R GR+DRKIEFP+
Sbjct: 257 SGSGGGDSEVQRTMLELLNQLDGFESTKNIKVLMCTNRIDILDPALLRPGRIDRKIEFPN 316
Query: 341 PTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVN 400
P + R IL+IHSRKMN+ +N ++++ + +GA+LKAVC EAGM ALR V+
Sbjct: 317 PGDAGRLDILKIHSRKMNLTRGINLKKISDKMNGASGAELKAVCTEAGMYALRERRVHVS 376
Query: 401 HEDFNEGIIQVQAKKKASLN 420
EDF + +V KK + N
Sbjct: 377 QEDFEMAVSKVM-KKDSEQN 395
Score = 48 (22.0 bits), Expect = 3.6e-80, Sum P(2) = 3.6e-80
Identities = 9/13 (69%), Positives = 12/13 (92%)
Query: 31 LDNEIRVLKEELQ 43
L+N +R+LKEELQ
Sbjct: 48 LNNRVRMLKEELQ 60
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 785 (281.4 bits), Expect = 4.6e-80, Sum P(2) = 4.6e-80
Identities = 159/311 (51%), Positives = 208/311 (66%)
Query: 104 KCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDE 163
K V++K + V +D + + P V + DSY + LP++ D V M V++
Sbjct: 89 KKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEK 148
Query: 164 KPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARA 223
P Y IGGL+KQI+E+ E I LP+ H E F+ LG+ PKGVLLYGPPGTGKTL+ARA
Sbjct: 149 VPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARA 208
Query: 224 CAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSE 283
A T+ TF++++G +LVQ FIG+GA++VR+ F +A+E +P IIF+DEID+IG+ R +
Sbjct: 209 VAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGG 268
Query: 284 VSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTE 343
GD EVQRTMLELLNQLDGF + IKVI ATNR DILD AL+R GR+DRKIEFP P E
Sbjct: 269 SGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNE 328
Query: 344 EARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 403
EAR IL+IHSRKMN+ +N ++A +GA++K VC EAGM ALR V ED
Sbjct: 329 EARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQED 388
Query: 404 FNEGIIQVQAK 414
F + +V K
Sbjct: 389 FEMAVAKVMQK 399
Score = 38 (18.4 bits), Expect = 4.6e-80, Sum P(2) = 4.6e-80
Identities = 7/13 (53%), Positives = 12/13 (92%)
Query: 31 LDNEIRVLKEELQ 43
L+ ++R+L+EELQ
Sbjct: 58 LNAKVRLLREELQ 70
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 785 (281.4 bits), Expect = 4.6e-80, Sum P(2) = 4.6e-80
Identities = 159/311 (51%), Positives = 208/311 (66%)
Query: 104 KCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDE 163
K V++K + V +D + + P V + DSY + LP++ D V M V++
Sbjct: 83 KKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEK 142
Query: 164 KPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARA 223
P Y IGGL+KQI+E+ E I LP+ H E F+ LG+ PKGVLLYGPPGTGKTL+ARA
Sbjct: 143 VPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARA 202
Query: 224 CAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSE 283
A T+ TF++++G +LVQ FIG+GA++VR+ F +A+E +P IIF+DEID+IG+ R +
Sbjct: 203 VAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGG 262
Query: 284 VSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTE 343
GD EVQRTMLELLNQLDGF + IKVI ATNR DILD AL+R GR+DRKIEFP P E
Sbjct: 263 SGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNE 322
Query: 344 EARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 403
EAR IL+IHSRKMN+ +N ++A +GA++K VC EAGM ALR V ED
Sbjct: 323 EARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQED 382
Query: 404 FNEGIIQVQAK 414
F + +V K
Sbjct: 383 FEMAVAKVMQK 393
Score = 38 (18.4 bits), Expect = 4.6e-80, Sum P(2) = 4.6e-80
Identities = 7/13 (53%), Positives = 12/13 (92%)
Query: 31 LDNEIRVLKEELQ 43
L+ ++R+L+EELQ
Sbjct: 52 LNAKVRLLREELQ 64
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 785 (281.4 bits), Expect = 4.6e-80, Sum P(2) = 4.6e-80
Identities = 159/311 (51%), Positives = 208/311 (66%)
Query: 104 KCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDE 163
K V++K + V +D + + P V + DSY + LP++ D V M V++
Sbjct: 83 KKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEK 142
Query: 164 KPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARA 223
P Y IGGL+KQI+E+ E I LP+ H E F+ LG+ PKGVLLYGPPGTGKTL+ARA
Sbjct: 143 VPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARA 202
Query: 224 CAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSE 283
A T+ TF++++G +LVQ FIG+GA++VR+ F +A+E +P IIF+DEID+IG+ R +
Sbjct: 203 VAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGG 262
Query: 284 VSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTE 343
GD EVQRTMLELLNQLDGF + IKVI ATNR DILD AL+R GR+DRKIEFP P E
Sbjct: 263 SGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNE 322
Query: 344 EARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 403
EAR IL+IHSRKMN+ +N ++A +GA++K VC EAGM ALR V ED
Sbjct: 323 EARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQED 382
Query: 404 FNEGIIQVQAK 414
F + +V K
Sbjct: 383 FEMAVAKVMQK 393
Score = 38 (18.4 bits), Expect = 4.6e-80, Sum P(2) = 4.6e-80
Identities = 7/13 (53%), Positives = 12/13 (92%)
Query: 31 LDNEIRVLKEELQ 43
L+ ++R+L+EELQ
Sbjct: 52 LNAKVRLLREELQ 64
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 785 (281.4 bits), Expect = 4.6e-80, Sum P(2) = 4.6e-80
Identities = 159/311 (51%), Positives = 208/311 (66%)
Query: 104 KCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDE 163
K V++K + V +D + + P V + DSY + LP++ D V M V++
Sbjct: 83 KKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEK 142
Query: 164 KPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARA 223
P Y IGGL+KQI+E+ E I LP+ H E F+ LG+ PKGVLLYGPPGTGKTL+ARA
Sbjct: 143 VPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARA 202
Query: 224 CAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSE 283
A T+ TF++++G +LVQ FIG+GA++VR+ F +A+E +P IIF+DEID+IG+ R +
Sbjct: 203 VAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGG 262
Query: 284 VSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTE 343
GD EVQRTMLELLNQLDGF + IKVI ATNR DILD AL+R GR+DRKIEFP P E
Sbjct: 263 SGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNE 322
Query: 344 EARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 403
EAR IL+IHSRKMN+ +N ++A +GA++K VC EAGM ALR V ED
Sbjct: 323 EARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQED 382
Query: 404 FNEGIIQVQAK 414
F + +V K
Sbjct: 383 FEMAVAKVMQK 393
Score = 38 (18.4 bits), Expect = 4.6e-80, Sum P(2) = 4.6e-80
Identities = 7/13 (53%), Positives = 12/13 (92%)
Query: 31 LDNEIRVLKEELQ 43
L+ ++R+L+EELQ
Sbjct: 52 LNAKVRLLREELQ 64
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 785 (281.4 bits), Expect = 4.6e-80, Sum P(2) = 4.6e-80
Identities = 159/311 (51%), Positives = 208/311 (66%)
Query: 104 KCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDE 163
K V++K + V +D + + P V + DSY + LP++ D V M V++
Sbjct: 83 KKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEK 142
Query: 164 KPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARA 223
P Y IGGL+KQI+E+ E I LP+ H E F+ LG+ PKGVLLYGPPGTGKTL+ARA
Sbjct: 143 VPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARA 202
Query: 224 CAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSE 283
A T+ TF++++G +LVQ FIG+GA++VR+ F +A+E +P IIF+DEID+IG+ R +
Sbjct: 203 VAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGG 262
Query: 284 VSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTE 343
GD EVQRTMLELLNQLDGF + IKVI ATNR DILD AL+R GR+DRKIEFP P E
Sbjct: 263 SGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNE 322
Query: 344 EARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 403
EAR IL+IHSRKMN+ +N ++A +GA++K VC EAGM ALR V ED
Sbjct: 323 EARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQED 382
Query: 404 FNEGIIQVQAK 414
F + +V K
Sbjct: 383 FEMAVAKVMQK 393
Score = 38 (18.4 bits), Expect = 4.6e-80, Sum P(2) = 4.6e-80
Identities = 7/13 (53%), Positives = 12/13 (92%)
Query: 31 LDNEIRVLKEELQ 43
L+ ++R+L+EELQ
Sbjct: 52 LNAKVRLLREELQ 64
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 785 (281.4 bits), Expect = 4.6e-80, Sum P(2) = 4.6e-80
Identities = 159/311 (51%), Positives = 208/311 (66%)
Query: 104 KCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDE 163
K V++K + V +D + + P V + DSY + LP++ D V M V++
Sbjct: 91 KKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEK 150
Query: 164 KPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARA 223
P Y IGGL+KQI+E+ E I LP+ H E F+ LG+ PKGVLLYGPPGTGKTL+ARA
Sbjct: 151 VPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARA 210
Query: 224 CAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSE 283
A T+ TF++++G +LVQ FIG+GA++VR+ F +A+E +P IIF+DEID+IG+ R +
Sbjct: 211 VAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGG 270
Query: 284 VSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTE 343
GD EVQRTMLELLNQLDGF + IKVI ATNR DILD AL+R GR+DRKIEFP P E
Sbjct: 271 SGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNE 330
Query: 344 EARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 403
EAR IL+IHSRKMN+ +N ++A +GA++K VC EAGM ALR V ED
Sbjct: 331 EARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQED 390
Query: 404 FNEGIIQVQAK 414
F + +V K
Sbjct: 391 FEMAVAKVMQK 401
Score = 38 (18.4 bits), Expect = 4.6e-80, Sum P(2) = 4.6e-80
Identities = 7/13 (53%), Positives = 12/13 (92%)
Query: 31 LDNEIRVLKEELQ 43
L+ ++R+L+EELQ
Sbjct: 60 LNAKVRLLREELQ 72
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 785 (281.4 bits), Expect = 4.6e-80, Sum P(2) = 4.6e-80
Identities = 159/311 (51%), Positives = 208/311 (66%)
Query: 104 KCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDE 163
K V++K + V +D + + P V + DSY + LP++ D V M V++
Sbjct: 83 KKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEK 142
Query: 164 KPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARA 223
P Y IGGL+KQI+E+ E I LP+ H E F+ LG+ PKGVLLYGPPGTGKTL+ARA
Sbjct: 143 VPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARA 202
Query: 224 CAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSE 283
A T+ TF++++G +LVQ FIG+GA++VR+ F +A+E +P IIF+DEID+IG+ R +
Sbjct: 203 VAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGG 262
Query: 284 VSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTE 343
GD EVQRTMLELLNQLDGF + IKVI ATNR DILD AL+R GR+DRKIEFP P E
Sbjct: 263 SGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNE 322
Query: 344 EARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 403
EAR IL+IHSRKMN+ +N ++A +GA++K VC EAGM ALR V ED
Sbjct: 323 EARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQED 382
Query: 404 FNEGIIQVQAK 414
F + +V K
Sbjct: 383 FEMAVAKVMQK 393
Score = 38 (18.4 bits), Expect = 4.6e-80, Sum P(2) = 4.6e-80
Identities = 7/13 (53%), Positives = 12/13 (92%)
Query: 31 LDNEIRVLKEELQ 43
L+ ++R+L+EELQ
Sbjct: 52 LNAKVRLLREELQ 64
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 785 (281.4 bits), Expect = 4.6e-80, Sum P(2) = 4.6e-80
Identities = 159/311 (51%), Positives = 208/311 (66%)
Query: 104 KCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDE 163
K V++K + V +D + + P V + DSY + LP++ D V M V++
Sbjct: 83 KKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEK 142
Query: 164 KPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARA 223
P Y IGGL+KQI+E+ E I LP+ H E F+ LG+ PKGVLLYGPPGTGKTL+ARA
Sbjct: 143 VPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARA 202
Query: 224 CAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSE 283
A T+ TF++++G +LVQ FIG+GA++VR+ F +A+E +P IIF+DEID+IG+ R +
Sbjct: 203 VAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGG 262
Query: 284 VSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTE 343
GD EVQRTMLELLNQLDGF + IKVI ATNR DILD AL+R GR+DRKIEFP P E
Sbjct: 263 SGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNE 322
Query: 344 EARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 403
EAR IL+IHSRKMN+ +N ++A +GA++K VC EAGM ALR V ED
Sbjct: 323 EARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQED 382
Query: 404 FNEGIIQVQAK 414
F + +V K
Sbjct: 383 FEMAVAKVMQK 393
Score = 38 (18.4 bits), Expect = 4.6e-80, Sum P(2) = 4.6e-80
Identities = 7/13 (53%), Positives = 12/13 (92%)
Query: 31 LDNEIRVLKEELQ 43
L+ ++R+L+EELQ
Sbjct: 52 LNAKVRLLREELQ 64
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 785 (281.4 bits), Expect = 4.6e-80, Sum P(2) = 4.6e-80
Identities = 159/311 (51%), Positives = 208/311 (66%)
Query: 104 KCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDE 163
K V++K + V +D + + P V + DSY + LP++ D V M V++
Sbjct: 83 KKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEK 142
Query: 164 KPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARA 223
P Y IGGL+KQI+E+ E I LP+ H E F+ LG+ PKGVLLYGPPGTGKTL+ARA
Sbjct: 143 VPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARA 202
Query: 224 CAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSE 283
A T+ TF++++G +LVQ FIG+GA++VR+ F +A+E +P IIF+DEID+IG+ R +
Sbjct: 203 VAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGG 262
Query: 284 VSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTE 343
GD EVQRTMLELLNQLDGF + IKVI ATNR DILD AL+R GR+DRKIEFP P E
Sbjct: 263 SGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNE 322
Query: 344 EARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 403
EAR IL+IHSRKMN+ +N ++A +GA++K VC EAGM ALR V ED
Sbjct: 323 EARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQED 382
Query: 404 FNEGIIQVQAK 414
F + +V K
Sbjct: 383 FEMAVAKVMQK 393
Score = 38 (18.4 bits), Expect = 4.6e-80, Sum P(2) = 4.6e-80
Identities = 7/13 (53%), Positives = 12/13 (92%)
Query: 31 LDNEIRVLKEELQ 43
L+ ++R+L+EELQ
Sbjct: 52 LNAKVRLLREELQ 64
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 784 (281.0 bits), Expect = 5.8e-80, Sum P(2) = 5.8e-80
Identities = 159/327 (48%), Positives = 215/327 (65%)
Query: 89 EEDGANI-DLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDT 147
+E G+ + ++ K V++K + + +D + + P V + +SY +
Sbjct: 66 QEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKI 125
Query: 148 LPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGV 207
LP++ D V M V++ P Y +GGL+KQI+E+ E I LP+ H E F LG+ PKGV
Sbjct: 126 LPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGV 185
Query: 208 LLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCII 267
LLYGPPGTGKTL+ARA A T TF++++G +LVQ FIG+G+++VR+ F +A+E +P II
Sbjct: 186 LLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSII 245
Query: 268 FIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALM 327
F+DEID+IG+ R +S GD EVQRTMLELLNQLDGF + IKVI ATNR DILDPAL+
Sbjct: 246 FMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALL 305
Query: 328 RSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEA 387
R GR+DRKIEFP P EEAR IL+IHSRKMN+ +N ++A +GA++K VC EA
Sbjct: 306 RPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEA 365
Query: 388 GMLALRRDATEVNHEDFNEGIIQVQAK 414
GM ALR V EDF + +V K
Sbjct: 366 GMYALRERRVHVTQEDFEMAVAKVMQK 392
Score = 38 (18.4 bits), Expect = 5.8e-80, Sum P(2) = 5.8e-80
Identities = 7/13 (53%), Positives = 12/13 (92%)
Query: 31 LDNEIRVLKEELQ 43
L+ ++R+L+EELQ
Sbjct: 51 LNAKVRMLREELQ 63
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 784 (281.0 bits), Expect = 5.8e-80, Sum P(2) = 5.8e-80
Identities = 158/311 (50%), Positives = 208/311 (66%)
Query: 104 KCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDE 163
K V++K + + +D + + P V + DSY + LP++ D V M V++
Sbjct: 91 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEK 150
Query: 164 KPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARA 223
P Y IGGL+KQI+E+ E I LP+ H E F+ LG+ PKGVLLYGPPGTGKTL+ARA
Sbjct: 151 VPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARA 210
Query: 224 CAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSE 283
A T+ TF++++G +LVQ FIG+GA++VR+ F +A+E +P IIF+DEID+IG+ R +
Sbjct: 211 VAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGG 270
Query: 284 VSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTE 343
GD EVQRTMLELLNQLDGF + IKVI ATNR DILD AL+R GR+DRKIEFP P E
Sbjct: 271 SGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNE 330
Query: 344 EARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 403
EAR IL+IHSRKMN+ +N ++A +GA++K VC EAGM ALR V ED
Sbjct: 331 EARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQED 390
Query: 404 FNEGIIQVQAK 414
F + +V K
Sbjct: 391 FEMAVAKVMQK 401
Score = 38 (18.4 bits), Expect = 5.8e-80, Sum P(2) = 5.8e-80
Identities = 7/13 (53%), Positives = 12/13 (92%)
Query: 31 LDNEIRVLKEELQ 43
L+ ++R+L+EELQ
Sbjct: 60 LNAKVRLLREELQ 72
>CGD|CAL0005257 [details] [associations]
symbol:RPT2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045732 "positive regulation
of protein catabolic process" evidence=IEA] [GO:0043171 "peptide
catabolic process" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005257 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000051 EMBL:AACQ01000050
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03062 RefSeq:XP_717718.1
RefSeq:XP_717812.1 ProteinModelPortal:Q5A7M6 STRING:Q5A7M6
GeneID:3640525 GeneID:3640683 KEGG:cal:CaO19.12895
KEGG:cal:CaO19.5440 Uniprot:Q5A7M6
Length = 465
Score = 802 (287.4 bits), Expect = 7.6e-80, P = 7.6e-80
Identities = 152/314 (48%), Positives = 217/314 (69%)
Query: 107 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 166
++ ++ ++ ++ VD L+PG V ++ + ++ L + D V M++D+ PT
Sbjct: 123 IVSSTASSEYYVSIMSFVDKGLLEPGCSVLLHHKTVAVVGVLQDDADPMVSVMKLDKSPT 182
Query: 167 EDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAA 226
E Y DIGGLE QIQE+ E++ LP+TH E ++++G++PPKGV+LYG PGTGKTL+A+A A
Sbjct: 183 ESYADIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVAN 242
Query: 227 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSG 286
QT+ATFL++ G +L+Q ++GDG +L R FQ+A + +P I+FIDEIDAIGTKR++S G
Sbjct: 243 QTSATFLRIVGSELIQKYLGDGPRLCRQIFQIAADHAPSIVFIDEIDAIGTKRYESTSGG 302
Query: 287 DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 346
+RE+QRTMLELLNQLDGF IKVI ATN+ + LDPAL+R GR+DRKI F +P +
Sbjct: 303 EREIQRTMLELLNQLDGFDDRGDIKVIMATNKIESLDPALIRPGRIDRKILFENPDANTK 362
Query: 347 ARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 406
+IL IH+ KM++ DVN +E+ DD +GA +KA+C EAG+LALR +V EDF
Sbjct: 363 KKILTIHTSKMSLADDVNLDEIVTGKDDLSGADIKAICTEAGLLALRERRMQVKAEDFKS 422
Query: 407 GIIQVQAKKKASLN 420
+V K K N
Sbjct: 423 AKERV-LKNKVEEN 435
>POMBASE|SPBC4.07c [details] [associations]
symbol:rpt2 "19S proteasome regulatory subunit Rpt2"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC4.07c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016887
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03062 OMA:FIRNQER EMBL:Z29366 PIR:S39348
RefSeq:NP_595480.1 ProteinModelPortal:P36612 IntAct:P36612
STRING:P36612 PRIDE:P36612 EnsemblFungi:SPBC4.07c.1 GeneID:2540939
KEGG:spo:SPBC4.07c OrthoDB:EOG4FN7S6 NextBio:20802054
Uniprot:P36612
Length = 448
Score = 802 (287.4 bits), Expect = 7.6e-80, P = 7.6e-80
Identities = 154/291 (52%), Positives = 211/291 (72%)
Query: 117 FLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLE 176
++ ++ VD D L+PG V ++ + I+ L + D + M++D+ PTE Y DIGGLE
Sbjct: 138 YVSIMSFVDKDMLEPGCSVLLHHKAMSIVGLLLDDTDPMINVMKLDKAPTESYADIGGLE 197
Query: 177 KQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLA 236
QIQE+ EA+ LP+TH E ++++G++PPKGV+LYG PGTGKTL+A+A A QT+ATFL++
Sbjct: 198 SQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVV 257
Query: 237 GPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLE 296
G +L+Q ++GDG +LVR F A+E SP I+FIDEIDAIGTKR+D++ +RE+QRTMLE
Sbjct: 258 GSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKRYDAQSGAEREIQRTMLE 317
Query: 297 LLNQLDGFSSDDR-IKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSR 355
LLNQLDGF + R IKVI ATNR LDPAL+R GR+DRKI F +P E + +I IH+
Sbjct: 318 LLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKILFENPDEATKRKIFTIHTS 377
Query: 356 KMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 406
KMN+ DVN EEL + DD +GA++KA+ EAG+LALR V +DF +
Sbjct: 378 KMNLGEDVNLEELIQCKDDLSGAEIKAIVSEAGLLALRERRMRVVMDDFRQ 428
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 778 (278.9 bits), Expect = 2.5e-79, Sum P(2) = 2.5e-79
Identities = 159/311 (51%), Positives = 208/311 (66%)
Query: 104 KCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDE 163
K V++K + V +D + + P V + DSY + LP++ D V M V++
Sbjct: 78 KKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEK 137
Query: 164 KPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARA 223
P Y IGGL+KQI+E+ E I LP+ H E F+ LG+ PKGVLLYGPPGTGKTL+ARA
Sbjct: 138 VPDSTYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARA 197
Query: 224 CAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSE 283
A T+ TF++++G +LVQ FIG+GA++VR+ F +A+E +P IIF+DEID+IG+ R +
Sbjct: 198 VAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGS-RLEGG 256
Query: 284 VSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTE 343
GD EVQRTMLELLNQLDGF + IKVI ATNR DILD AL+R GR+DRKIEFP P E
Sbjct: 257 SGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNE 316
Query: 344 EARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 403
EAR IL+IHSRKMN+ +N ++A +GA++K VC EAGM ALR V ED
Sbjct: 317 EARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQED 376
Query: 404 FNEGIIQVQAK 414
F + +V K
Sbjct: 377 FEMAVAKVMQK 387
Score = 38 (18.4 bits), Expect = 2.5e-79, Sum P(2) = 2.5e-79
Identities = 7/13 (53%), Positives = 12/13 (92%)
Query: 31 LDNEIRVLKEELQ 43
L+ ++R+L+EELQ
Sbjct: 47 LNAKVRLLREELQ 59
>ASPGD|ASPL0000049719 [details] [associations]
symbol:AN2213 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0043171 "peptide catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001307
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER
OrthoDB:EOG4FN7S6 EMBL:AACD01000035 RefSeq:XP_659817.1
ProteinModelPortal:Q5BB67 STRING:Q5BB67
EnsemblFungi:CADANIAT00008897 GeneID:2875757 KEGG:ani:AN2213.2
Uniprot:Q5BB67
Length = 460
Score = 794 (284.6 bits), Expect = 5.4e-79, P = 5.4e-79
Identities = 146/310 (47%), Positives = 216/310 (69%)
Query: 107 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 166
++ ++T ++ ++ VD D L+PG + ++ + ++ L E D V M++D+ PT
Sbjct: 141 IVSSATGPEYYVSIMSFVDKDLLEPGASILLHHKTVSVVGVLTEESDPLVSVMKLDKAPT 200
Query: 167 EDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAA 226
E Y DIGGLE QIQE+ E++ LP+ H E ++++G++PPKGV+LYG PGTGKTL+A+A A
Sbjct: 201 ESYADIGGLESQIQEVRESVELPLLHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVAN 260
Query: 227 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSG 286
QT+ATFL++ G +L+Q ++GDG +LVR FQ+A E +P I+FIDEIDAIGTKR+DS G
Sbjct: 261 QTSATFLRIVGSELIQKYLGDGPRLVRQIFQVAAEHAPSIVFIDEIDAIGTKRYDSTSGG 320
Query: 287 DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 346
+RE+QRTMLELLNQLDGF +KVI ATN+ + LDPAL+R GR+DRKI F +P + +
Sbjct: 321 EREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDQNTK 380
Query: 347 ARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 406
+I +H+ KM++ DV+ +E DD +GA ++A+C EAG++ALR V +DF
Sbjct: 381 KKIFTLHTSKMSLGDDVDLDEFINQKDDLSGADIRAICTEAGLMALRERRMRVQMDDFRA 440
Query: 407 GIIQVQAKKK 416
++ K+
Sbjct: 441 ARERIMKTKQ 450
>WB|WBGene00004503 [details] [associations]
symbol:rpt-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK
EMBL:FO081210 PIR:A88485 RefSeq:NP_498429.1
ProteinModelPortal:P46502 SMR:P46502 DIP:DIP-24412N IntAct:P46502
MINT:MINT-212949 STRING:P46502 PaxDb:P46502
EnsemblMetazoa:F23F12.6.1 EnsemblMetazoa:F23F12.6.2 GeneID:175925
KEGG:cel:CELE_F23F12.6 UCSC:F23F12.6.1 CTD:175925 WormBase:F23F12.6
GeneTree:ENSGT00550000074962 InParanoid:P46502 NextBio:890338
Uniprot:P46502
Length = 414
Score = 774 (277.5 bits), Expect = 8.4e-79, Sum P(2) = 8.4e-79
Identities = 148/316 (46%), Positives = 210/316 (66%)
Query: 107 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 166
++ ++T ++ V+ ++D + LKPG V ++K S ++D LP E DS ++ + DEKP
Sbjct: 98 IVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEADSSIQMLRPDEKPD 157
Query: 167 EDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAA 226
Y DIGGL+ Q QE+ EA+ LP+TH E +Q++G+ PP+GVL+YGPPG GKT++A+A AA
Sbjct: 158 ISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAA 217
Query: 227 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSG 286
T A+F+++ G + VQ ++G+G ++VRD F+LAKE SP IIFIDEIDAI TKRFD++
Sbjct: 218 NTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDAQTGA 277
Query: 287 DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 346
DREVQR +LELLNQ+DGF +KVI ATNR D LDPAL+R GRLDRKIEFP P +
Sbjct: 278 DREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQK 337
Query: 347 ARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 406
+ +MN+ DV+ E+ D +GA + ++C EAGM A+R + V +D +
Sbjct: 338 RLVFSTVCSRMNLSDDVDLEDWVARPDKISGADINSICQEAGMQAVRENRYVVLTKDLEK 397
Query: 407 GIIQVQAKKKASLNYY 422
V K +Y
Sbjct: 398 AYKNVVKKDTNDFEFY 413
Score = 37 (18.1 bits), Expect = 8.4e-79, Sum P(2) = 8.4e-79
Identities = 12/76 (15%), Positives = 30/76 (39%)
Query: 19 MTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVE 78
+++DD ++ + L + ++ L+ LE + +P ++G +E
Sbjct: 32 VSSDDYIKLTTL-ERQLAHLQVMEDYIKLETRNLEKELLHAQEEVKRIQSVPLVIGQFLE 90
Query: 79 ILEMNPEDEAEEDGAN 94
++ N G+N
Sbjct: 91 AVDQNHAIVGSTTGSN 106
>TAIR|locus:2024822 [details] [associations]
symbol:RPT1A "regulatory particle triple-A 1A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC009324 EMBL:AC024260
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123390 EMBL:AY062860 EMBL:BT000069 IPI:IPI00548766
PIR:G96577 RefSeq:NP_175778.1 UniGene:At.66918
ProteinModelPortal:Q9SSB5 SMR:Q9SSB5 IntAct:Q9SSB5 STRING:Q9SSB5
PaxDb:Q9SSB5 PRIDE:Q9SSB5 EnsemblPlants:AT1G53750.1 GeneID:841812
KEGG:ath:AT1G53750 GeneFarm:2748 TAIR:At1g53750 InParanoid:Q9SSB5
KO:K03061 OMA:DIRWELI PhylomeDB:Q9SSB5 ProtClustDB:CLSN2682130
Genevestigator:Q9SSB5 GermOnline:AT1G53750 Uniprot:Q9SSB5
Length = 426
Score = 792 (283.9 bits), Expect = 8.7e-79, P = 8.7e-79
Identities = 154/295 (52%), Positives = 207/295 (70%)
Query: 120 VVGL---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLE 176
VVGL V P ++ G VGV+++ Y I LP + D V M V+EKP YND+GG +
Sbjct: 115 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCK 174
Query: 177 KQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLA 236
+QI+++ E + LPM H E+F KLG+ PPKGVL YGPPGTGKTL+ARA A +T+A F+++
Sbjct: 175 EQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVI 234
Query: 237 GPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLE 296
G +LVQ ++G+GA++VR+ FQ+A+ K CI+F DE+DAIG RFD V GD EVQRTMLE
Sbjct: 235 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLE 294
Query: 297 LLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRK 356
++NQLDGF + IKV+ ATNR D LDPAL+R GRLDRK+EF P E+R +I +IH+R
Sbjct: 295 IVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRT 354
Query: 357 MNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV 411
MN D+ FE LAR + GA +++VC EAGM A+R V +DF + + +V
Sbjct: 355 MNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKV 409
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 770 (276.1 bits), Expect = 1.1e-78, Sum P(2) = 1.1e-78
Identities = 154/311 (49%), Positives = 207/311 (66%)
Query: 104 KCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDE 163
K V++K + V +D KL P V + DS+ + LP++ D V M V++
Sbjct: 78 KKVLVKIHPEGKFIVNVTKDIDVKKLTPSIRVCLKPDSHDLYKILPTKVDPLVSLMMVEK 137
Query: 164 KPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARA 223
P Y+ +GGL+KQI+E+ E I LP+ H E F+ LG+ PKGV+LYGPPGTGKTL+ARA
Sbjct: 138 VPDSTYDMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARA 197
Query: 224 CAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSE 283
A T F++++G +LVQ +IG+G+++VR+ F +A+E +P IIF+DEID+IG+ R +
Sbjct: 198 VAHHTECKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGS 257
Query: 284 VSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTE 343
GD EVQRTMLELLNQLDGF S IK+I ATNR DILDPAL+R GR+DRKIEFP PT
Sbjct: 258 SGGDSEVQRTMLELLNQLDGFESSKDIKIIMATNRLDILDPALLRPGRIDRKIEFPAPTV 317
Query: 344 EARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 403
AR IL+IHSR MN+ +N ++A + +GA +K VC EAGM ALR V ED
Sbjct: 318 AARTDILKIHSRSMNLTRGINLRKIAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQED 377
Query: 404 FNEGIIQVQAK 414
F + +V +K
Sbjct: 378 FELAVAKVMSK 388
Score = 40 (19.1 bits), Expect = 1.1e-78, Sum P(2) = 1.1e-78
Identities = 12/40 (30%), Positives = 24/40 (60%)
Query: 8 DPNLEDDQLS-SMTADDIVR--ASR-LLDNEIRVLKEELQ 43
+ ++D ++ T ++ R A R L+N++R LK+EL+
Sbjct: 20 EQQIQDTEIRIQQTTQNLRRLEAQRNKLNNKVRQLKDELK 59
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 789 (282.8 bits), Expect = 1.8e-78, P = 1.8e-78
Identities = 162/328 (49%), Positives = 219/328 (66%)
Query: 89 EEDGANIDLDSQRKGKCVVL-KTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDT 147
+E G+ + + GK VL K + + +D ++KP V + DSY ++
Sbjct: 63 QEPGSYVGEVIKTMGKNKVLVKVHPEGKYVVDISPDIDIKEIKPNIRVALRNDSYQLIKI 122
Query: 148 LPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGV 207
LP++ D V M V++ P Y +GGLEKQI+E+ E I LP+ H E F+ LG+ PKG+
Sbjct: 123 LPNKVDPLVSLMMVEKIPDSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGI 182
Query: 208 LLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCII 267
LLYGPPGTGKTL+ARA A T+ F++++G +LVQ +IG+G+++VR+ F +A+E +P II
Sbjct: 183 LLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSII 242
Query: 268 FIDEIDAIGTKRFDSEV-SGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPAL 326
F+DEID+IG+ R DS SGD EVQRTMLELLNQLDGF + IKVI ATNR DILDPAL
Sbjct: 243 FMDEIDSIGSSRSDSSGGSGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPAL 302
Query: 327 MRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVE 386
+R GR+DRKIEFP P+ EARA IL+IHSR MN+ ++ + +A + +GA+LK VC E
Sbjct: 303 LRPGRIDRKIEFPPPSAEARAEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELKGVCTE 362
Query: 387 AGMLALRRDATEVNHEDFNEGIIQVQAK 414
AGM ALR V EDF + +V K
Sbjct: 363 AGMFALRERRVHVTQEDFELAVAKVLNK 390
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 763 (273.6 bits), Expect = 3.6e-78, Sum P(2) = 3.6e-78
Identities = 144/331 (43%), Positives = 216/331 (65%)
Query: 92 GANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSE 151
G +++ Q G ++ ++T ++ ++ ++ + LKP V +++ S ++D LP E
Sbjct: 80 GQFMEMVDQNNG---IVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPE 136
Query: 152 YDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYG 211
DS + + EKP YNDIGG + Q QE+ EA+ LP+TH E ++++G+ PP+GVLLYG
Sbjct: 137 ADSSISLLSQSEKPDVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYG 196
Query: 212 PPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDE 271
PPGTGKT++A+A A T A F+++ G + VQ ++G+G ++VRD F+LAKE +P IIFIDE
Sbjct: 197 PPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDE 256
Query: 272 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGR 331
+DAI T RFD++ DREVQR ++ELLNQ+DGF +KVI ATNRAD LDPAL+R GR
Sbjct: 257 VDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGR 316
Query: 332 LDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLA 391
LDRKIEFP P + + Q+ + KMN+ +V+ E+ D + A++ A+C EAGM A
Sbjct: 317 LDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHA 376
Query: 392 LRRDATEVNHEDFNEGIIQVQAKKKASLNYY 422
+R++ + +DF +G K +Y
Sbjct: 377 VRKNRYVILPKDFEKGYRANVKKPDTDFEFY 407
Score = 42 (19.8 bits), Expect = 3.6e-78, Sum P(2) = 3.6e-78
Identities = 16/93 (17%), Positives = 34/93 (36%)
Query: 4 AMVEDPNLEDDQLSSMTAD--DIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXX 61
+MV DP + TAD D+ + L+ ++ + + E +
Sbjct: 8 SMVLDPKASPALMDLSTADEEDLYGRLKSLERQLEFTDIQEEYVKDEQKNLKRELLRAQE 67
Query: 62 XXXXXXXLPYLVGNIVEILEMNPEDEAEEDGAN 94
+P ++G +E+++ N G+N
Sbjct: 68 EVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSN 100
>FB|FBgn0037742 [details] [associations]
symbol:Rpt3R "Regulatory particle triple-A ATPase 3-related"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0006200 GO:GO:0006974 GO:GO:0016887
GO:GO:0030163 TIGRFAMs:TIGR01242 KO:K03063
GeneTree:ENSGT00550000074962 FlyBase:FBgn0037742 EMBL:BT016035
RefSeq:NP_649938.2 UniGene:Dm.21651 SMR:Q9VH79 STRING:Q9VH79
EnsemblMetazoa:FBtr0301536 EnsemblMetazoa:FBtr0332172 GeneID:41190
KEGG:dme:Dmel_CG9475 UCSC:CG9475-RA CTD:41190 InParanoid:Q9VH79
OMA:KQSNCLV OrthoDB:EOG49GHZ0 GenomeRNAi:41190 NextBio:822637
Uniprot:Q9VH79
Length = 405
Score = 786 (281.7 bits), Expect = 3.8e-78, P = 3.8e-78
Identities = 149/317 (47%), Positives = 215/317 (67%)
Query: 107 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 166
++ ++T ++ V+ +D ++LKP VG++K S ++D +P E DS + + DEKP
Sbjct: 89 IVASTTGSNYYVRVLSTIDREQLKPSSSVGLHKQSNCLVDLVPPEADSTISMLSPDEKPD 148
Query: 167 EDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAA 226
Y+DIGGL+ Q QE+ EA+ LP+TH + ++++G+ PP+GVLL+GPPG GKT++A+A A
Sbjct: 149 ISYSDIGGLDIQKQEIREAVELPLTHAQLYKQIGIDPPRGVLLFGPPGCGKTMLAKAVAH 208
Query: 227 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSG 286
T A+F+++ G + VQ ++G+G ++VRD F+LAK+ SP IIFIDEIDAI TKRFD++
Sbjct: 209 HTTASFIRVVGSEFVQKYLGEGPRMVRDLFRLAKQNSPSIIFIDEIDAIATKRFDAQTGA 268
Query: 287 DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 346
DREVQR +LELLNQ+DGF IKVI ATNRAD LDPAL+R GRLDRKIE P P +
Sbjct: 269 DREVQRILLELLNQMDGFDETTNIKVIMATNRADTLDPALLRPGRLDRKIELPLPDRRQK 328
Query: 347 ARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 406
+ + KMNV DV+ E++ D + A + A+C EAGM A+R + VN +DF +
Sbjct: 329 RLVFTTITSKMNVGEDVDLEDIIARPDKISNADINAICQEAGMHAVRENRYVVNAKDFEK 388
Query: 407 GIIQVQAKKKASLNYYA 423
G K +A +Y+
Sbjct: 389 GYKTSVRKDEAQHEFYS 405
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 767 (275.1 bits), Expect = 4.6e-78, Sum P(2) = 4.6e-78
Identities = 156/313 (49%), Positives = 208/313 (66%)
Query: 102 KGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEV 161
K K V++K + V ++ + P V + +SY + LP++ D V M V
Sbjct: 76 KNK-VLVKVHPEGKYVVDVDKTINIKDVTPSSRVALRNESYTLHKILPNKVDPLVSLMLV 134
Query: 162 DEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMA 221
++ P Y +GGL+KQIQE+ E I LP+ H E F LG+ PKGVLLYGPPGTGKTL+A
Sbjct: 135 EKVPDSTYEMVGGLDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLA 194
Query: 222 RACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFD 281
RA A T TF++++G +LVQ FIG+G+++VR+ F +A+E +P IIF+DEID+IG+ R +
Sbjct: 195 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARLE 254
Query: 282 SEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHP 341
+ +GD EVQRTMLELLNQLDGF + IKVI ATNR D+LD AL+R GR+DRKIEFP P
Sbjct: 255 TG-TGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDVLDQALLRPGRIDRKIEFPPP 313
Query: 342 TEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNH 401
EEAR IL+IHSRKMN+ +N ++A +GA++K VC EAGM ALR V
Sbjct: 314 NEEARLDILKIHSRKMNLTRGINLRKIAEEMPGASGAEVKGVCTEAGMYALRERRVHVTQ 373
Query: 402 EDFNEGIIQVQAK 414
EDF + +V K
Sbjct: 374 EDFEMAVSKVMMK 386
Score = 37 (18.1 bits), Expect = 4.6e-78, Sum P(2) = 4.6e-78
Identities = 7/13 (53%), Positives = 12/13 (92%)
Query: 31 LDNEIRVLKEELQ 43
L+ ++R+L+EELQ
Sbjct: 46 LNLKVRLLREELQ 58
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 778 (278.9 bits), Expect = 2.7e-77, P = 2.7e-77
Identities = 158/302 (52%), Positives = 206/302 (68%)
Query: 104 KCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDE 163
K V++K + + VD KL G V + DSY + LPS D V M V++
Sbjct: 66 KKVLVKVHPEGKYVVDIADGVDIGKLTVGKRVALLSDSYKLEKMLPSSVDPLVSLMMVEK 125
Query: 164 KPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARA 223
P Y+ IGGL++QI+E+ E I L + H E F+ LG+ PKGVLLYGPPGTGKTL+ARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 224 CAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSE 283
A T+ F++++G +LVQ +IG+G+++VR+ F +A+E +P IIF+DEID+IG+ R DS
Sbjct: 186 VAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIDSA 245
Query: 284 VSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTE 343
SGD EVQRTMLELLNQLDGF IK+I ATNR DILDPAL+R GR+DRKIEFP P+
Sbjct: 246 GSGDSEVQRTMLELLNQLDGFEPTKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSV 305
Query: 344 EARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 403
EARA IL+IHSR MN+ +N ++A + +GA+LK VC EAGM ALR V ED
Sbjct: 306 EARADILRIHSRSMNLTRGINLTKIAEKMNGCSGAELKGVCTEAGMYALRERRVHVTQED 365
Query: 404 FN 405
F+
Sbjct: 366 FD 367
>UNIPROTKB|Q5R8D7 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9601 "Pongo abelii" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:CR859816 RefSeq:NP_001126144.1
UniGene:Pab.13078 ProteinModelPortal:Q5R8D7 PRIDE:Q5R8D7
GeneID:100173102 KEGG:pon:100173102 InParanoid:Q5R8D7
Uniprot:Q5R8D7
Length = 433
Score = 777 (278.6 bits), Expect = 3.4e-77, P = 3.4e-77
Identities = 155/301 (51%), Positives = 205/301 (68%)
Query: 124 VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELV 183
V P ++ G VGV+++ Y I LP + D V M+V+EKP Y+D+GG ++QI++L
Sbjct: 129 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLR 188
Query: 184 EAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM 243
E + P+ H ERF LG+ PPKGVLL+GPPGTGKTL ARA A +T+A F+++ G +LVQ
Sbjct: 189 EVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQK 248
Query: 244 FIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDG 303
++G+GA++VR+ F++A+ K C+IF DEIDAIG RFD GD EVQRTMLEL+NQLDG
Sbjct: 249 YVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDG 308
Query: 304 FSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDV 363
F IKV+ ATNR D LDPALMR GRLDRKIEF P E R IL+IH+R M+V D+
Sbjct: 309 FDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHILKIHARSMSVERDI 368
Query: 364 NFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGI---IQVQAKKKASLN 420
FE LAR + GA++++VC EAGM A+R +DF E + I+ AK A+
Sbjct: 369 RFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPR 428
Query: 421 Y 421
Y
Sbjct: 429 Y 429
>FB|FBgn0028686 [details] [associations]
symbol:Rpt3 "Regulatory particle triple-A ATPase 3"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005838 "proteasome regulatory particle"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:AE014298 GO:GO:0006508
GO:GO:0006974 GO:GO:0016887 GO:GO:0004175 GO:GO:0001673
GO:GO:0030163 HSSP:Q01853 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0008540 BRENDA:3.4.25.1 KO:K03063 OMA:DQTTNVK
GeneTree:ENSGT00550000074962 EMBL:AF145306 EMBL:BT046144
EMBL:FN544098 EMBL:FN544099 EMBL:FN544100 EMBL:FN544101
EMBL:FN544102 EMBL:FN544103 EMBL:FN544104 EMBL:FN544105
EMBL:FN544106 EMBL:FN544108 RefSeq:NP_572686.1 UniGene:Dm.8238
SMR:Q9V405 STRING:Q9V405 EnsemblMetazoa:FBtr0073436 GeneID:32047
KEGG:dme:Dmel_CG16916 UCSC:CG16916-RA CTD:32047 FlyBase:FBgn0028686
InParanoid:Q9V405 OrthoDB:EOG4P5HRH GenomeRNAi:32047 NextBio:776548
Uniprot:Q9V405
Length = 413
Score = 776 (278.2 bits), Expect = 4.3e-77, P = 4.3e-77
Identities = 145/301 (48%), Positives = 207/301 (68%)
Query: 107 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 166
++ ++T ++ ++ +D + LKP V ++K S ++D LP E DS + ++ DEKP
Sbjct: 97 IVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQPDEKPD 156
Query: 167 EDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAA 226
Y DIGG++ Q QE+ EA+ LP+TH E ++++G+ PP+GVL+YGPPG GKT++A+A A
Sbjct: 157 VSYADIGGMDMQKQEIREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 216
Query: 227 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSG 286
T A+F+++ G + VQ ++G+G ++VRD F+LAKE +P IIFIDEIDAI TKRFD++
Sbjct: 217 HTTASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGA 276
Query: 287 DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 346
DREVQR +LELLNQ+DGF +KVI ATNRAD LDPAL+R GRLDRKIEFP P +
Sbjct: 277 DREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 336
Query: 347 ARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 406
+ + KMN+ DV+ EE D +GA + A+C EAGM A+R + V +DF +
Sbjct: 337 RLVFSTITSKMNLSEDVDLEEFVARPDKISGADINAICQEAGMHAVRENRYIVLAKDFEK 396
Query: 407 G 407
G
Sbjct: 397 G 397
>DICTYBASE|DDB_G0276917 [details] [associations]
symbol:psmC2 "26S proteasome ATPase 2 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0276917 GO:GO:0005524 GO:GO:0005634 GO:GO:0045335
GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0000502 GO:GO:0006511
HSSP:Q9WZ49 EMBL:AAFI02000019 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03061 RefSeq:XP_642830.1 ProteinModelPortal:Q86JA1
STRING:Q86JA1 PRIDE:Q86JA1 EnsemblProtists:DDB0232966
GeneID:8620693 KEGG:ddi:DDB_G0276917 OMA:HIFTIHA
ProtClustDB:CLSZ2429177 Uniprot:Q86JA1
Length = 428
Score = 775 (277.9 bits), Expect = 5.5e-77, P = 5.5e-77
Identities = 156/303 (51%), Positives = 206/303 (67%)
Query: 127 DKLKPGDL-----VGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQE 181
DKL P D+ VGV+++ Y I LP + D+ V M+V+EKP Y D+GG ++QI++
Sbjct: 122 DKLSPTDVEEGIRVGVDRNKYQIQIPLPPKIDASVTMMQVEEKPDITYKDVGGCKEQIEK 181
Query: 182 LVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLV 241
L E + +P+ H E+F LG+ PPKGVL+YGPPGTGKTL ARA A +T+A F+++ G +LV
Sbjct: 182 LREVVEMPLLHPEKFVNLGIDPPKGVLMYGPPGTGKTLCARAVANRTDAAFVRVIGSELV 241
Query: 242 QMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQL 301
Q ++G+GA++VRD FQ+A+ K CIIF DE+DAIG RFD GD EVQRTMLEL+NQL
Sbjct: 242 QKYVGEGARMVRDLFQMARSKKACIIFFDEVDAIGGARFDDGAGGDNEVQRTMLELINQL 301
Query: 302 DGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHP 361
DGF IKV+ ATNR D LDPAL+R GRLDRK+EF P E RA I IH++ M+
Sbjct: 302 DGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRAHIFTIHAKTMSCAR 361
Query: 362 DVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGI---IQVQAKKKAS 418
D+ FE LAR + GA +++VC EAGM A+R V+ +DF E I I+ AK A+
Sbjct: 362 DIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKVVSEKDFLEAIDKVIKSYAKFSAT 421
Query: 419 LNY 421
Y
Sbjct: 422 SRY 424
>UNIPROTKB|F1MG70 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 OMA:DQTTNVK
IPI:IPI00718026 GeneTree:ENSGT00550000074962 EMBL:DAAA02047067
Ensembl:ENSBTAT00000012391 ArrayExpress:F1MG70 Uniprot:F1MG70
Length = 417
Score = 756 (271.2 bits), Expect = 6.6e-77, Sum P(2) = 6.6e-77
Identities = 144/316 (45%), Positives = 211/316 (66%)
Query: 107 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 166
++ ++T ++ ++ +D + LKP V ++K S ++D LP E DS + + D+KP
Sbjct: 101 IVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPD 160
Query: 167 EDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAA 226
Y DIGG++ Q QE+ EA+ LP+TH E ++++G+ PP+GVL+YGPPG GKT++A+A A
Sbjct: 161 VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 220
Query: 227 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSG 286
T A F+++ G + VQ ++G+G ++VRD F+LAKE +P IIFIDEIDAI TKRFD++
Sbjct: 221 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGA 280
Query: 287 DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 346
DREVQR +LELLNQ+DGF + +KVI ATNRAD LDPAL+R GRLDRKIEFP P +
Sbjct: 281 DREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 340
Query: 347 ARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 406
I + KMN+ +V+ E+ D +GA + ++C E+GMLA+R + V +DF +
Sbjct: 341 RLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEK 400
Query: 407 GIIQVQAKKKASLNYY 422
V K + +Y
Sbjct: 401 AYKTVIKKDEQEHEFY 416
Score = 37 (18.1 bits), Expect = 6.6e-77, Sum P(2) = 6.6e-77
Identities = 11/73 (15%), Positives = 26/73 (35%)
Query: 22 DDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILE 81
+D+ + L E+ L+ + + E + +P ++G +E ++
Sbjct: 37 EDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVD 96
Query: 82 MNPEDEAEEDGAN 94
N G+N
Sbjct: 97 QNTAIVGSTTGSN 109
>UNIPROTKB|Q3T030 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 EMBL:BC102595 IPI:IPI00718026
RefSeq:NP_001030255.1 UniGene:Bt.48909 ProteinModelPortal:Q3T030
SMR:Q3T030 STRING:Q3T030 PRIDE:Q3T030 GeneID:510029 KEGG:bta:510029
CTD:5704 InParanoid:Q3T030 OrthoDB:EOG4KD6M4 NextBio:20869245
ArrayExpress:Q3T030 Uniprot:Q3T030
Length = 418
Score = 756 (271.2 bits), Expect = 6.6e-77, Sum P(2) = 6.6e-77
Identities = 144/316 (45%), Positives = 211/316 (66%)
Query: 107 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 166
++ ++T ++ ++ +D + LKP V ++K S ++D LP E DS + + D+KP
Sbjct: 102 IVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPD 161
Query: 167 EDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAA 226
Y DIGG++ Q QE+ EA+ LP+TH E ++++G+ PP+GVL+YGPPG GKT++A+A A
Sbjct: 162 VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 221
Query: 227 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSG 286
T A F+++ G + VQ ++G+G ++VRD F+LAKE +P IIFIDEIDAI TKRFD++
Sbjct: 222 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGA 281
Query: 287 DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 346
DREVQR +LELLNQ+DGF + +KVI ATNRAD LDPAL+R GRLDRKIEFP P +
Sbjct: 282 DREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 341
Query: 347 ARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 406
I + KMN+ +V+ E+ D +GA + ++C E+GMLA+R + V +DF +
Sbjct: 342 RLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEK 401
Query: 407 GIIQVQAKKKASLNYY 422
V K + +Y
Sbjct: 402 AYKTVIKKDEQEHEFY 417
Score = 37 (18.1 bits), Expect = 6.6e-77, Sum P(2) = 6.6e-77
Identities = 11/73 (15%), Positives = 26/73 (35%)
Query: 22 DDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILE 81
+D+ + L E+ L+ + + E + +P ++G +E ++
Sbjct: 38 EDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVD 97
Query: 82 MNPEDEAEEDGAN 94
N G+N
Sbjct: 98 QNTAIVGSTTGSN 110
>UNIPROTKB|E2RH48 [details] [associations]
symbol:PSMC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001824 "blastocyst development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 EMBL:AAEX03000950
RefSeq:XP_003638879.1 ProteinModelPortal:E2RH48 SMR:E2RH48
PRIDE:E2RH48 Ensembl:ENSCAFT00000008685 GeneID:100855613
KEGG:cfa:100855613 NextBio:20852115 Uniprot:E2RH48
Length = 418
Score = 756 (271.2 bits), Expect = 6.6e-77, Sum P(2) = 6.6e-77
Identities = 144/316 (45%), Positives = 211/316 (66%)
Query: 107 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 166
++ ++T ++ ++ +D + LKP V ++K S ++D LP E DS + + D+KP
Sbjct: 102 IVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPD 161
Query: 167 EDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAA 226
Y DIGG++ Q QE+ EA+ LP+TH E ++++G+ PP+GVL+YGPPG GKT++A+A A
Sbjct: 162 VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 221
Query: 227 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSG 286
T A F+++ G + VQ ++G+G ++VRD F+LAKE +P IIFIDEIDAI TKRFD++
Sbjct: 222 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGA 281
Query: 287 DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 346
DREVQR +LELLNQ+DGF + +KVI ATNRAD LDPAL+R GRLDRKIEFP P +
Sbjct: 282 DREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 341
Query: 347 ARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 406
I + KMN+ +V+ E+ D +GA + ++C E+GMLA+R + V +DF +
Sbjct: 342 RLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEK 401
Query: 407 GIIQVQAKKKASLNYY 422
V K + +Y
Sbjct: 402 AYKTVIKKDEQEHEFY 417
Score = 37 (18.1 bits), Expect = 6.6e-77, Sum P(2) = 6.6e-77
Identities = 11/73 (15%), Positives = 26/73 (35%)
Query: 22 DDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILE 81
+D+ + L E+ L+ + + E + +P ++G +E ++
Sbjct: 38 EDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVD 97
Query: 82 MNPEDEAEEDGAN 94
N G+N
Sbjct: 98 QNTAIVGSTTGSN 110
>UNIPROTKB|P43686 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0006508 "proteolysis" evidence=TAS] [GO:0016887
"ATPase activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006521 "regulation of cellular amino acid metabolic process"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0006977 "DNA damage response, signal transduction by p53 class
mediator resulting in cell cycle arrest" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=TAS]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0016887 GO:GO:0051436
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 GO:GO:0001824 Reactome:REACT_383
EMBL:AC007842 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 EMBL:AF038965 EMBL:U27515 EMBL:AF020736
EMBL:BT007232 EMBL:BC000343 EMBL:BC010396 EMBL:BC014488
IPI:IPI00020042 IPI:IPI00216770 RefSeq:NP_006494.1
RefSeq:NP_694546.1 UniGene:Hs.211594 PDB:2DVW PDBsum:2DVW
ProteinModelPortal:P43686 SMR:P43686 DIP:DIP-29274N IntAct:P43686
MINT:MINT-5004247 STRING:P43686 PhosphoSite:P43686 DMDM:20532409
OGP:P43686 PaxDb:P43686 PRIDE:P43686 DNASU:5704
Ensembl:ENST00000157812 Ensembl:ENST00000455878 GeneID:5704
KEGG:hsa:5704 UCSC:uc002omq.3 UCSC:uc002omr.3 GeneCards:GC19P040477
HGNC:HGNC:9551 HPA:HPA002044 HPA:HPA005471 MIM:602707
neXtProt:NX_P43686 PharmGKB:PA33896 InParanoid:P43686
PhylomeDB:P43686 ChiTaRS:PSMC4 EvolutionaryTrace:P43686
GenomeRNAi:5704 NextBio:22160 ArrayExpress:P43686 Bgee:P43686
CleanEx:HS_PSMC4 Genevestigator:P43686 GermOnline:ENSG00000013275
Uniprot:P43686
Length = 418
Score = 756 (271.2 bits), Expect = 6.6e-77, Sum P(2) = 6.6e-77
Identities = 144/316 (45%), Positives = 211/316 (66%)
Query: 107 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 166
++ ++T ++ ++ +D + LKP V ++K S ++D LP E DS + + D+KP
Sbjct: 102 IVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPD 161
Query: 167 EDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAA 226
Y DIGG++ Q QE+ EA+ LP+TH E ++++G+ PP+GVL+YGPPG GKT++A+A A
Sbjct: 162 VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 221
Query: 227 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSG 286
T A F+++ G + VQ ++G+G ++VRD F+LAKE +P IIFIDEIDAI TKRFD++
Sbjct: 222 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGA 281
Query: 287 DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 346
DREVQR +LELLNQ+DGF + +KVI ATNRAD LDPAL+R GRLDRKIEFP P +
Sbjct: 282 DREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 341
Query: 347 ARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 406
I + KMN+ +V+ E+ D +GA + ++C E+GMLA+R + V +DF +
Sbjct: 342 RLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEK 401
Query: 407 GIIQVQAKKKASLNYY 422
V K + +Y
Sbjct: 402 AYKTVIKKDEQEHEFY 417
Score = 37 (18.1 bits), Expect = 6.6e-77, Sum P(2) = 6.6e-77
Identities = 11/73 (15%), Positives = 26/73 (35%)
Query: 22 DDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILE 81
+D+ + L E+ L+ + + E + +P ++G +E ++
Sbjct: 38 EDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVD 97
Query: 82 MNPEDEAEEDGAN 94
N G+N
Sbjct: 98 QNTAIVGSTTGSN 110
>UNIPROTKB|Q4R7L3 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9541 "Macaca fascicularis" [GO:0022624 "proteasome
accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:AB168803
ProteinModelPortal:Q4R7L3 SMR:Q4R7L3 PRIDE:Q4R7L3 Uniprot:Q4R7L3
Length = 418
Score = 756 (271.2 bits), Expect = 6.6e-77, Sum P(2) = 6.6e-77
Identities = 144/316 (45%), Positives = 211/316 (66%)
Query: 107 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 166
++ ++T ++ ++ +D + LKP V ++K S ++D LP E DS + + D+KP
Sbjct: 102 IVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPD 161
Query: 167 EDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAA 226
Y DIGG++ Q QE+ EA+ LP+TH E ++++G+ PP+GVL+YGPPG GKT++A+A A
Sbjct: 162 VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 221
Query: 227 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSG 286
T A F+++ G + VQ ++G+G ++VRD F+LAKE +P IIFIDEIDAI TKRFD++
Sbjct: 222 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGA 281
Query: 287 DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 346
DREVQR +LELLNQ+DGF + +KVI ATNRAD LDPAL+R GRLDRKIEFP P +
Sbjct: 282 DREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 341
Query: 347 ARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 406
I + KMN+ +V+ E+ D +GA + ++C E+GMLA+R + V +DF +
Sbjct: 342 RLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEK 401
Query: 407 GIIQVQAKKKASLNYY 422
V K + +Y
Sbjct: 402 AYKTVIKKDEQEHEFY 417
Score = 37 (18.1 bits), Expect = 6.6e-77, Sum P(2) = 6.6e-77
Identities = 11/73 (15%), Positives = 26/73 (35%)
Query: 22 DDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILE 81
+D+ + L E+ L+ + + E + +P ++G +E ++
Sbjct: 38 EDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVD 97
Query: 82 MNPEDEAEEDGAN 94
N G+N
Sbjct: 98 QNTAIVGSTTGSN 110
>MGI|MGI:1346093 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1346093
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 EMBL:CH466593 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962 EMBL:L76223
EMBL:AB040869 EMBL:AK077507 EMBL:AK153991 EMBL:AK160718
EMBL:AK167041 EMBL:BC012708 IPI:IPI00108895 RefSeq:NP_036004.2
UniGene:Mm.29582 PDB:3AJI PDBsum:3AJI ProteinModelPortal:P54775
SMR:P54775 IntAct:P54775 STRING:P54775 PhosphoSite:P54775
REPRODUCTION-2DPAGE:P54775 PaxDb:P54775 PRIDE:P54775
Ensembl:ENSMUST00000032824 GeneID:23996 KEGG:mmu:23996
InParanoid:Q6ZWN9 EvolutionaryTrace:P54775 NextBio:303909
Bgee:P54775 Genevestigator:P54775 GermOnline:ENSMUSG00000030603
Uniprot:P54775
Length = 418
Score = 756 (271.2 bits), Expect = 6.6e-77, Sum P(2) = 6.6e-77
Identities = 144/316 (45%), Positives = 211/316 (66%)
Query: 107 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 166
++ ++T ++ ++ +D + LKP V ++K S ++D LP E DS + + D+KP
Sbjct: 102 IVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPD 161
Query: 167 EDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAA 226
Y DIGG++ Q QE+ EA+ LP+TH E ++++G+ PP+GVL+YGPPG GKT++A+A A
Sbjct: 162 VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 221
Query: 227 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSG 286
T A F+++ G + VQ ++G+G ++VRD F+LAKE +P IIFIDEIDAI TKRFD++
Sbjct: 222 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGA 281
Query: 287 DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 346
DREVQR +LELLNQ+DGF + +KVI ATNRAD LDPAL+R GRLDRKIEFP P +
Sbjct: 282 DREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 341
Query: 347 ARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 406
I + KMN+ +V+ E+ D +GA + ++C E+GMLA+R + V +DF +
Sbjct: 342 RLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEK 401
Query: 407 GIIQVQAKKKASLNYY 422
V K + +Y
Sbjct: 402 AYKTVIKKDEQEHEFY 417
Score = 37 (18.1 bits), Expect = 6.6e-77, Sum P(2) = 6.6e-77
Identities = 11/73 (15%), Positives = 26/73 (35%)
Query: 22 DDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILE 81
+D+ + L E+ L+ + + E + +P ++G +E ++
Sbjct: 38 EDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVD 97
Query: 82 MNPEDEAEEDGAN 94
N G+N
Sbjct: 98 QNTAIVGSTTGSN 110
>RGD|621102 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10116 "Rattus norvegicus" [GO:0001824
"blastocyst development" evidence=IEA;ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006200 "ATP catabolic process" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0022624 "proteasome
accessory complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621102 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 GO:GO:0001824 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK CTD:5704 OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962
EMBL:D50695 EMBL:BC063145 IPI:IPI00210158 RefSeq:NP_476463.1
UniGene:Rn.11341 PDB:2DWZ PDBsum:2DWZ ProteinModelPortal:Q63570
SMR:Q63570 IntAct:Q63570 STRING:Q63570 PhosphoSite:Q63570
PRIDE:Q63570 Ensembl:ENSRNOT00000025819 GeneID:117262
KEGG:rno:117262 UCSC:RGD:621102 InParanoid:Q63570
EvolutionaryTrace:Q63570 NextBio:620144 Genevestigator:Q63570
GermOnline:ENSRNOG00000018994 Uniprot:Q63570
Length = 418
Score = 756 (271.2 bits), Expect = 6.6e-77, Sum P(2) = 6.6e-77
Identities = 144/316 (45%), Positives = 211/316 (66%)
Query: 107 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 166
++ ++T ++ ++ +D + LKP V ++K S ++D LP E DS + + D+KP
Sbjct: 102 IVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPD 161
Query: 167 EDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAA 226
Y DIGG++ Q QE+ EA+ LP+TH E ++++G+ PP+GVL+YGPPG GKT++A+A A
Sbjct: 162 VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 221
Query: 227 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSG 286
T A F+++ G + VQ ++G+G ++VRD F+LAKE +P IIFIDEIDAI TKRFD++
Sbjct: 222 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGA 281
Query: 287 DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 346
DREVQR +LELLNQ+DGF + +KVI ATNRAD LDPAL+R GRLDRKIEFP P +
Sbjct: 282 DREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 341
Query: 347 ARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 406
I + KMN+ +V+ E+ D +GA + ++C E+GMLA+R + V +DF +
Sbjct: 342 RLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEK 401
Query: 407 GIIQVQAKKKASLNYY 422
V K + +Y
Sbjct: 402 AYKTVIKKDEQEHEFY 417
Score = 37 (18.1 bits), Expect = 6.6e-77, Sum P(2) = 6.6e-77
Identities = 11/73 (15%), Positives = 26/73 (35%)
Query: 22 DDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILE 81
+D+ + L E+ L+ + + E + +P ++G +E ++
Sbjct: 38 EDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVD 97
Query: 82 MNPEDEAEEDGAN 94
N G+N
Sbjct: 98 QNTAIVGSTTGSN 110
>UNIPROTKB|P46472 [details] [associations]
symbol:psmc2 "26S protease regulatory subunit 7"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:X80157 EMBL:BC054143 PIR:S53709
RefSeq:NP_001084136.1 UniGene:Xl.57157 ProteinModelPortal:P46472
GeneID:399327 KEGG:xla:399327 Xenbase:XB-GENE-1000023
Uniprot:P46472
Length = 433
Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
Identities = 154/301 (51%), Positives = 204/301 (67%)
Query: 124 VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELV 183
V P ++ G VGV+++ Y I LP + D V M+V+EKP Y+D+GG ++QI++L
Sbjct: 129 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLR 188
Query: 184 EAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM 243
E + P+ H ERF LG+ PPKGVLL+GPPGTGKTL ARA A +T+A F+++ G +LVQ
Sbjct: 189 EVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQK 248
Query: 244 FIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDG 303
++G+GA++VR+ F++A+ K C+IF DEIDAIG RFD GD EVQRTMLEL+NQLDG
Sbjct: 249 YVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDG 308
Query: 304 FSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDV 363
F IKV+ ATNR D LDPALMR GRLDRKIEF P E R I +IH+R M+V D+
Sbjct: 309 FDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDI 368
Query: 364 NFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGI---IQVQAKKKASLN 420
FE LAR + GA++++VC EAGM A+R +DF E + I+ AK A+
Sbjct: 369 RFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAVNKVIKSYAKFSATPR 428
Query: 421 Y 421
Y
Sbjct: 429 Y 429
>UNIPROTKB|E1C4V5 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
EMBL:AADN02036894 EMBL:AADN02036895 IPI:IPI00602342
Ensembl:ENSGALT00000013403 ArrayExpress:E1C4V5 Uniprot:E1C4V5
Length = 424
Score = 773 (277.2 bits), Expect = 9.0e-77, P = 9.0e-77
Identities = 154/301 (51%), Positives = 204/301 (67%)
Query: 124 VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELV 183
V P ++ G VGV+++ Y I LP + D V M+V+EKP Y+D+GG ++QI++L
Sbjct: 120 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLR 179
Query: 184 EAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM 243
E + P+ H ERF LG+ PPKGVLL+GPPGTGKTL ARA A +T+A F+++ G +LVQ
Sbjct: 180 EVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQK 239
Query: 244 FIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDG 303
++G+GA++VR+ F++A+ K C+IF DEIDAIG RFD GD EVQRTMLEL+NQLDG
Sbjct: 240 YVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDG 299
Query: 304 FSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDV 363
F IKV+ ATNR D LDPALMR GRLDRKIEF P E R I +IH+R M+V D+
Sbjct: 300 FDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDI 359
Query: 364 NFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGI---IQVQAKKKASLN 420
FE LAR + GA++++VC EAGM A+R +DF E + I+ AK A+
Sbjct: 360 RFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPR 419
Query: 421 Y 421
Y
Sbjct: 420 Y 420
>UNIPROTKB|F1NFL8 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 OMA:DIRWELI
GeneTree:ENSGT00550000074978 EMBL:AADN02036894 EMBL:AADN02036895
IPI:IPI00821647 Ensembl:ENSGALT00000039595 ArrayExpress:F1NFL8
Uniprot:F1NFL8
Length = 432
Score = 773 (277.2 bits), Expect = 9.0e-77, P = 9.0e-77
Identities = 154/301 (51%), Positives = 204/301 (67%)
Query: 124 VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELV 183
V P ++ G VGV+++ Y I LP + D V M+V+EKP Y+D+GG ++QI++L
Sbjct: 128 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLR 187
Query: 184 EAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM 243
E + P+ H ERF LG+ PPKGVLL+GPPGTGKTL ARA A +T+A F+++ G +LVQ
Sbjct: 188 EVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQK 247
Query: 244 FIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDG 303
++G+GA++VR+ F++A+ K C+IF DEIDAIG RFD GD EVQRTMLEL+NQLDG
Sbjct: 248 YVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDG 307
Query: 304 FSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDV 363
F IKV+ ATNR D LDPALMR GRLDRKIEF P E R I +IH+R M+V D+
Sbjct: 308 FDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDI 367
Query: 364 NFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGI---IQVQAKKKASLN 420
FE LAR + GA++++VC EAGM A+R +DF E + I+ AK A+
Sbjct: 368 RFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPR 427
Query: 421 Y 421
Y
Sbjct: 428 Y 428
>UNIPROTKB|Q5E9F9 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9913 "Bos taurus" [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 HSSP:Q9WZ49 GO:GO:0000932 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 KO:K03061 OMA:DIRWELI
EMBL:BT020961 EMBL:BC102391 IPI:IPI00693210 RefSeq:NP_001015639.1
UniGene:Bt.24017 ProteinModelPortal:Q5E9F9 SMR:Q5E9F9 PRIDE:Q5E9F9
Ensembl:ENSBTAT00000065774 GeneID:530186 KEGG:bta:530186 CTD:5701
GeneTree:ENSGT00550000074978 OrthoDB:EOG4RXZ05 NextBio:20875201
Uniprot:Q5E9F9
Length = 433
Score = 773 (277.2 bits), Expect = 9.0e-77, P = 9.0e-77
Identities = 154/301 (51%), Positives = 204/301 (67%)
Query: 124 VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELV 183
V P ++ G VGV+++ Y I LP + D V M+V+EKP Y+D+GG ++QI++L
Sbjct: 129 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLR 188
Query: 184 EAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM 243
E + P+ H ERF LG+ PPKGVLL+GPPGTGKTL ARA A +T+A F+++ G +LVQ
Sbjct: 189 EVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQK 248
Query: 244 FIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDG 303
++G+GA++VR+ F++A+ K C+IF DEIDAIG RFD GD EVQRTMLEL+NQLDG
Sbjct: 249 YVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDG 308
Query: 304 FSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDV 363
F IKV+ ATNR D LDPALMR GRLDRKIEF P E R I +IH+R M+V D+
Sbjct: 309 FDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDI 368
Query: 364 NFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGI---IQVQAKKKASLN 420
FE LAR + GA++++VC EAGM A+R +DF E + I+ AK A+
Sbjct: 369 RFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPR 428
Query: 421 Y 421
Y
Sbjct: 429 Y 429
>UNIPROTKB|F1PPH7 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 KO:K03061
OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978 EMBL:AAEX03011248
RefSeq:XP_533103.3 ProteinModelPortal:F1PPH7
Ensembl:ENSCAFT00000006754 GeneID:475896 KEGG:cfa:475896
Uniprot:F1PPH7
Length = 433
Score = 773 (277.2 bits), Expect = 9.0e-77, P = 9.0e-77
Identities = 154/301 (51%), Positives = 204/301 (67%)
Query: 124 VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELV 183
V P ++ G VGV+++ Y I LP + D V M+V+EKP Y+D+GG ++QI++L
Sbjct: 129 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLR 188
Query: 184 EAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM 243
E + P+ H ERF LG+ PPKGVLL+GPPGTGKTL ARA A +T+A F+++ G +LVQ
Sbjct: 189 EVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQK 248
Query: 244 FIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDG 303
++G+GA++VR+ F++A+ K C+IF DEIDAIG RFD GD EVQRTMLEL+NQLDG
Sbjct: 249 YVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDG 308
Query: 304 FSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDV 363
F IKV+ ATNR D LDPALMR GRLDRKIEF P E R I +IH+R M+V D+
Sbjct: 309 FDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDI 368
Query: 364 NFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGI---IQVQAKKKASLN 420
FE LAR + GA++++VC EAGM A+R +DF E + I+ AK A+
Sbjct: 369 RFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPR 428
Query: 421 Y 421
Y
Sbjct: 429 Y 429
>UNIPROTKB|P35998 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0016887
GO:GO:0051436 GO:GO:0000932 EMBL:CH471070 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH236947 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI CTD:5701 EMBL:D11094
EMBL:AB075520 EMBL:BC002589 IPI:IPI00021435 PIR:S24353
RefSeq:NP_001191382.1 RefSeq:NP_002794.1 UniGene:Hs.437366
ProteinModelPortal:P35998 SMR:P35998 DIP:DIP-27554N IntAct:P35998
MINT:MINT-1163662 STRING:P35998 PhosphoSite:P35998 DMDM:547930
OGP:P35998 REPRODUCTION-2DPAGE:IPI00021435
REPRODUCTION-2DPAGE:P35998 PaxDb:P35998 PeptideAtlas:P35998
PRIDE:P35998 DNASU:5701 Ensembl:ENST00000292644
Ensembl:ENST00000435765 GeneID:5701 KEGG:hsa:5701 UCSC:uc003vbs.3
GeneCards:GC07P102984 HGNC:HGNC:9548 HPA:HPA019238 MIM:154365
neXtProt:NX_P35998 PharmGKB:PA33893 InParanoid:P35998
PhylomeDB:P35998 ChiTaRS:PSMC2 GenomeRNAi:5701 NextBio:22150
ArrayExpress:P35998 Bgee:P35998 CleanEx:HS_PSMC2
Genevestigator:P35998 GermOnline:ENSG00000161057 Uniprot:P35998
Length = 433
Score = 773 (277.2 bits), Expect = 9.0e-77, P = 9.0e-77
Identities = 154/301 (51%), Positives = 204/301 (67%)
Query: 124 VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELV 183
V P ++ G VGV+++ Y I LP + D V M+V+EKP Y+D+GG ++QI++L
Sbjct: 129 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLR 188
Query: 184 EAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM 243
E + P+ H ERF LG+ PPKGVLL+GPPGTGKTL ARA A +T+A F+++ G +LVQ
Sbjct: 189 EVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQK 248
Query: 244 FIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDG 303
++G+GA++VR+ F++A+ K C+IF DEIDAIG RFD GD EVQRTMLEL+NQLDG
Sbjct: 249 YVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDG 308
Query: 304 FSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDV 363
F IKV+ ATNR D LDPALMR GRLDRKIEF P E R I +IH+R M+V D+
Sbjct: 309 FDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDI 368
Query: 364 NFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGI---IQVQAKKKASLN 420
FE LAR + GA++++VC EAGM A+R +DF E + I+ AK A+
Sbjct: 369 RFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPR 428
Query: 421 Y 421
Y
Sbjct: 429 Y 429
>UNIPROTKB|F1SB53 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
OMA:HIFTIHA EMBL:CU570825 Ensembl:ENSSSCT00000016802 Uniprot:F1SB53
Length = 475
Score = 773 (277.2 bits), Expect = 9.0e-77, P = 9.0e-77
Identities = 154/301 (51%), Positives = 204/301 (67%)
Query: 124 VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELV 183
V P ++ G VGV+++ Y I LP + D V M+V+EKP Y+D+GG ++QI++L
Sbjct: 171 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLR 230
Query: 184 EAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM 243
E + P+ H ERF LG+ PPKGVLL+GPPGTGKTL ARA A +T+A F+++ G +LVQ
Sbjct: 231 EVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQK 290
Query: 244 FIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDG 303
++G+GA++VR+ F++A+ K C+IF DEIDAIG RFD GD EVQRTMLEL+NQLDG
Sbjct: 291 YVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDG 350
Query: 304 FSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDV 363
F IKV+ ATNR D LDPALMR GRLDRKIEF P E R I +IH+R M+V D+
Sbjct: 351 FDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDI 410
Query: 364 NFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGI---IQVQAKKKASLN 420
FE LAR + GA++++VC EAGM A+R +DF E + I+ AK A+
Sbjct: 411 RFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPR 470
Query: 421 Y 421
Y
Sbjct: 471 Y 471
>UNIPROTKB|I3LJ30 [details] [associations]
symbol:I3LJ30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
Ensembl:ENSSSCT00000030050 OMA:WDLAYEN Uniprot:I3LJ30
Length = 434
Score = 773 (277.2 bits), Expect = 9.0e-77, P = 9.0e-77
Identities = 154/301 (51%), Positives = 204/301 (67%)
Query: 124 VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELV 183
V P ++ G VGV+++ Y I LP + D V M+V+EKP Y+D+GG ++QI++L
Sbjct: 130 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLR 189
Query: 184 EAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM 243
E + P+ H ERF LG+ PPKGVLL+GPPGTGKTL ARA A +T+A F+++ G +LVQ
Sbjct: 190 EVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQK 249
Query: 244 FIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDG 303
++G+GA++VR+ F++A+ K C+IF DEIDAIG RFD GD EVQRTMLEL+NQLDG
Sbjct: 250 YVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDG 309
Query: 304 FSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDV 363
F IKV+ ATNR D LDPALMR GRLDRKIEF P E R I +IH+R M+V D+
Sbjct: 310 FDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDI 369
Query: 364 NFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGI---IQVQAKKKASLN 420
FE LAR + GA++++VC EAGM A+R +DF E + I+ AK A+
Sbjct: 370 RFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPR 429
Query: 421 Y 421
Y
Sbjct: 430 Y 430
>UNIPROTKB|Q4R4R0 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9541 "Macaca fascicularis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q9WZ49
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
EMBL:AB169834 ProteinModelPortal:Q4R4R0 SMR:Q4R4R0 PRIDE:Q4R4R0
Uniprot:Q4R4R0
Length = 433
Score = 773 (277.2 bits), Expect = 9.0e-77, P = 9.0e-77
Identities = 154/301 (51%), Positives = 204/301 (67%)
Query: 124 VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELV 183
V P ++ G VGV+++ Y I LP + D V M+V+EKP Y+D+GG ++QI++L
Sbjct: 129 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLR 188
Query: 184 EAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM 243
E + P+ H ERF LG+ PPKGVLL+GPPGTGKTL ARA A +T+A F+++ G +LVQ
Sbjct: 189 EVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQK 248
Query: 244 FIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDG 303
++G+GA++VR+ F++A+ K C+IF DEIDAIG RFD GD EVQRTMLEL+NQLDG
Sbjct: 249 YVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDG 308
Query: 304 FSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDV 363
F IKV+ ATNR D LDPALMR GRLDRKIEF P E R I +IH+R M+V D+
Sbjct: 309 FDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDI 368
Query: 364 NFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGI---IQVQAKKKASLN 420
FE LAR + GA++++VC EAGM A+R +DF E + I+ AK A+
Sbjct: 369 RFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPR 428
Query: 421 Y 421
Y
Sbjct: 429 Y 429
>MGI|MGI:109555 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit,
ATPase 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:109555 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
OrthoDB:EOG4RXZ05 ChiTaRS:PSMC2 EMBL:AK005083 EMBL:AK168548
EMBL:BC005462 EMBL:U61283 IPI:IPI00270326 PIR:S39349
UniGene:Mm.2462 ProteinModelPortal:P46471 SMR:P46471 IntAct:P46471
STRING:P46471 PhosphoSite:P46471 REPRODUCTION-2DPAGE:P46471
SWISS-2DPAGE:P46471 PaxDb:P46471 PRIDE:P46471 InParanoid:P46471
Bgee:P46471 Genevestigator:P46471 GermOnline:ENSMUSG00000028932
Uniprot:P46471
Length = 433
Score = 773 (277.2 bits), Expect = 9.0e-77, P = 9.0e-77
Identities = 154/301 (51%), Positives = 204/301 (67%)
Query: 124 VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELV 183
V P ++ G VGV+++ Y I LP + D V M+V+EKP Y+D+GG ++QI++L
Sbjct: 129 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLR 188
Query: 184 EAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM 243
E + P+ H ERF LG+ PPKGVLL+GPPGTGKTL ARA A +T+A F+++ G +LVQ
Sbjct: 189 EVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQK 248
Query: 244 FIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDG 303
++G+GA++VR+ F++A+ K C+IF DEIDAIG RFD GD EVQRTMLEL+NQLDG
Sbjct: 249 YVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDG 308
Query: 304 FSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDV 363
F IKV+ ATNR D LDPALMR GRLDRKIEF P E R I +IH+R M+V D+
Sbjct: 309 FDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDI 368
Query: 364 NFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGI---IQVQAKKKASLN 420
FE LAR + GA++++VC EAGM A+R +DF E + I+ AK A+
Sbjct: 369 RFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPR 428
Query: 421 Y 421
Y
Sbjct: 429 Y 429
>ZFIN|ZDB-GENE-040426-1327 [details] [associations]
symbol:psmc2 "proteasome (prosome, macropain) 26S
subunit, ATPase 2" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040426-1327 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03061 OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978
OrthoDB:EOG4RXZ05 HSSP:Q9LCZ4 EMBL:BX571796 EMBL:BC053187
IPI:IPI00491385 RefSeq:NP_957260.1 UniGene:Dr.75589 STRING:Q7T3B1
Ensembl:ENSDART00000019647 GeneID:393941 KEGG:dre:393941
InParanoid:Q7T3B1 NextBio:20814913 Uniprot:Q7T3B1
Length = 433
Score = 773 (277.2 bits), Expect = 9.0e-77, P = 9.0e-77
Identities = 154/301 (51%), Positives = 204/301 (67%)
Query: 124 VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELV 183
V P ++ G VGV+++ Y I LP + D V M+V+EKP Y+D+GG ++QI++L
Sbjct: 129 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLR 188
Query: 184 EAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM 243
E + P+ H ERF LG+ PPKGVLL+GPPGTGKTL ARA A +T+A F+++ G +LVQ
Sbjct: 189 EVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQK 248
Query: 244 FIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDG 303
++G+GA++VR+ F++A+ K C+IF DEIDAIG RFD GD EVQRTMLEL+NQLDG
Sbjct: 249 YVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDG 308
Query: 304 FSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDV 363
F IKV+ ATNR D LDPALMR GRLDRKIEF P E R I +IH+R M+V D+
Sbjct: 309 FDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDI 368
Query: 364 NFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGI---IQVQAKKKASLN 420
FE LAR + GA++++VC EAGM A+R +DF E + I+ AK A+
Sbjct: 369 RFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPR 428
Query: 421 Y 421
Y
Sbjct: 429 Y 429
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 772 (276.8 bits), Expect = 1.1e-76, P = 1.1e-76
Identities = 167/363 (46%), Positives = 231/363 (63%)
Query: 74 GNIVEILEMNPEDEAEEDGANIDLDS-QRKGKCV--VLKTSTRQTIFL-----P--VVGL 123
G + E+ E E + + + DL + Q G+ V VLK T + + P VVG
Sbjct: 24 GRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGC 83
Query: 124 ---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ 180
+D KLKPG V ++ + I+ LP E D V M ++ + Y++IGGL +QI+
Sbjct: 84 RRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGSVSYSEIGGLSEQIR 143
Query: 181 ELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL 240
EL E I LP+T+ E FQ++G+ PPKG LLYGPPGTGKTL+ARA A+Q + FLK+ +
Sbjct: 144 ELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSI 203
Query: 241 VQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300
V +IG+ A+L+R+ F A++ PCIIF+DEIDAIG +RF S DRE+QRT++ELLNQ
Sbjct: 204 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 263
Query: 301 LDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVH 360
+DGF + R+K+I ATNR D LDPAL+R GRLDRKI P E+AR IL+IHS + H
Sbjct: 264 MDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIELPNEQARLDILKIHSGPITKH 323
Query: 361 PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK--AS 418
D+++E + + +D FNGA L+ VC EAGM A+R D V EDF + + +V KK +
Sbjct: 324 GDIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHEYVTQEDFMKAVRKVADSKKLESK 383
Query: 419 LNY 421
L+Y
Sbjct: 384 LDY 386
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 771 (276.5 bits), Expect = 1.5e-76, P = 1.5e-76
Identities = 155/320 (48%), Positives = 217/320 (67%)
Query: 102 KGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEV 161
K K V++K + + + ++ P V + DSY + LPS+ D V M+V
Sbjct: 112 KNK-VLVKINPEGKYVVDIARHINISHCTPNTRVALYNDSYKLHKILPSKVDPLVSLMKV 170
Query: 162 DEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMA 221
++ P Y +GGL++Q++E+ E I LP+ H E F+ LG+ PKGVLLYGPPGTGKTL+A
Sbjct: 171 EKVPDSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLA 230
Query: 222 RACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFD 281
RA A T+ TF++++G +LVQ +IG+G+++VR+ F +A+E +P IIF+DEID+IG++R +
Sbjct: 231 RAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIE 290
Query: 282 SEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHP 341
E GD EVQRTM+ELLNQLDGF S IKVI TNR DILD AL+R GR+DRKIEFP+P
Sbjct: 291 GE-HGDSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRIDRKIEFPNP 349
Query: 342 TEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNH 401
EAR IL+IHSRKMN+ ++ ++A ++ +GA++KAVC EAGM ALR V
Sbjct: 350 NVEARMEILKIHSRKMNLMRGIDMLKIATDMNNCSGAEVKAVCTEAGMFALRERRVHVTQ 409
Query: 402 EDFNEGIIQVQAKKKASLNY 421
EDF + +V K+ A N+
Sbjct: 410 EDFEMAVAKVM-KQDAEKNF 428
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 771 (276.5 bits), Expect = 1.5e-76, P = 1.5e-76
Identities = 155/320 (48%), Positives = 217/320 (67%)
Query: 102 KGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEV 161
K K V++K + + + ++ P V + DSY + LPS+ D V M+V
Sbjct: 112 KNK-VLVKINPEGKYVVDIARHINISHCTPNTRVALYNDSYKLHKILPSKVDPLVSLMKV 170
Query: 162 DEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMA 221
++ P Y +GGL++Q++E+ E I LP+ H E F+ LG+ PKGVLLYGPPGTGKTL+A
Sbjct: 171 EKVPDSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLA 230
Query: 222 RACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFD 281
RA A T+ TF++++G +LVQ +IG+G+++VR+ F +A+E +P IIF+DEID+IG++R +
Sbjct: 231 RAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIE 290
Query: 282 SEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHP 341
E GD EVQRTM+ELLNQLDGF S IKVI TNR DILD AL+R GR+DRKIEFP+P
Sbjct: 291 GE-HGDSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRIDRKIEFPNP 349
Query: 342 TEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNH 401
EAR IL+IHSRKMN+ ++ ++A ++ +GA++KAVC EAGM ALR V
Sbjct: 350 NVEARMEILKIHSRKMNLMRGIDMLKIATDMNNCSGAEVKAVCTEAGMFALRERRVHVTQ 409
Query: 402 EDFNEGIIQVQAKKKASLNY 421
EDF + +V K+ A N+
Sbjct: 410 EDFEMAVAKVM-KQDAEKNF 428
>ZFIN|ZDB-GENE-030131-5083 [details] [associations]
symbol:psmc4 "proteasome (prosome, macropain) 26S
subunit, ATPase, 4" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005937
Pfam:PF00004 SMART:SM00382 ZFIN:ZDB-GENE-030131-5083 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 EMBL:BC055215 IPI:IPI00509630
UniGene:Dr.76514 ProteinModelPortal:Q7SXX0 SMR:Q7SXX0 STRING:Q7SXX0
PRIDE:Q7SXX0 InParanoid:Q7SXX0 ArrayExpress:Q7SXX0 Bgee:Q7SXX0
Uniprot:Q7SXX0
Length = 418
Score = 752 (269.8 bits), Expect = 1.8e-76, Sum P(2) = 1.8e-76
Identities = 143/316 (45%), Positives = 211/316 (66%)
Query: 107 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 166
++ ++T ++ ++ +D + LKP V ++K S ++D LP E DS + + D+KP
Sbjct: 102 IVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPD 161
Query: 167 EDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAA 226
Y+DIGG++ Q QE+ EA+ LP+TH E ++++G+ PP+GVL+YGPPG GKT++A+A A
Sbjct: 162 VLYSDIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 221
Query: 227 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSG 286
T A F+++ G + VQ ++G+G ++VRD F+LAKE +P IIFIDEIDAI TKRFD++
Sbjct: 222 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGA 281
Query: 287 DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 346
DREVQR +LELLNQ+DGF + +KVI ATNRAD LDPAL+ GRLDRKIEFP P +
Sbjct: 282 DREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLCPGRLDRKIEFPLPDRRQK 341
Query: 347 ARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 406
+ + KMN+ +V+ E+ D +GA + ++C EAGMLA+R + V +DF +
Sbjct: 342 RLVFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQEAGMLAVRENRYIVLAKDFEK 401
Query: 407 GIIQVQAKKKASLNYY 422
V K + +Y
Sbjct: 402 AYKTVIKKDEQEHEFY 417
Score = 37 (18.1 bits), Expect = 1.8e-76, Sum P(2) = 1.8e-76
Identities = 11/73 (15%), Positives = 26/73 (35%)
Query: 22 DDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILE 81
+D+ + L E+ L+ + + E + +P ++G +E ++
Sbjct: 38 EDLYSIYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVD 97
Query: 82 MNPEDEAEEDGAN 94
N G+N
Sbjct: 98 QNTAIVGSTTGSN 110
>RGD|3428 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit, ATPase
2" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA;ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03061
CTD:5701 OrthoDB:EOG4RXZ05 EMBL:D50694 EMBL:BC061542 EMBL:U13895
IPI:IPI00421600 RefSeq:NP_150239.1 UniGene:Rn.1202
ProteinModelPortal:Q63347 IntAct:Q63347 MINT:MINT-1794034
STRING:Q63347 PhosphoSite:Q63347 PRIDE:Q63347 GeneID:25581
KEGG:rno:25581 InParanoid:Q63347 NextBio:607227 Genevestigator:Q63347
GermOnline:ENSRNOG00000012026 Uniprot:Q63347
Length = 433
Score = 770 (276.1 bits), Expect = 1.9e-76, P = 1.9e-76
Identities = 154/301 (51%), Positives = 203/301 (67%)
Query: 124 VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELV 183
V P ++ G VGV+++ Y I LP + D V M+V+EKP Y+D+GG ++QI++L
Sbjct: 129 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLR 188
Query: 184 EAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM 243
E + P+ H ERF LG+ PPKGVLL+GPPGTGKTL ARA A +T+A F+ + G +LVQ
Sbjct: 189 EVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIPVIGSELVQK 248
Query: 244 FIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDG 303
++G+GA++VR+ F++A+ K C+IF DEIDAIG RFD GD EVQRTMLEL+NQLDG
Sbjct: 249 YVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDG 308
Query: 304 FSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDV 363
F IKV+ ATNR D LDPALMR GRLDRKIEF P E R I +IH+R M+V D+
Sbjct: 309 FDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDI 368
Query: 364 NFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGI---IQVQAKKKASLN 420
FE LAR + GA++++VC EAGM A+R +DF E + I+ AK A+
Sbjct: 369 RFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPR 428
Query: 421 Y 421
Y
Sbjct: 429 Y 429
>UNIPROTKB|Q63347 [details] [associations]
symbol:Psmc2 "26S protease regulatory subunit 7"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 CTD:5701 OrthoDB:EOG4RXZ05
EMBL:D50694 EMBL:BC061542 EMBL:U13895 IPI:IPI00421600
RefSeq:NP_150239.1 UniGene:Rn.1202 ProteinModelPortal:Q63347
IntAct:Q63347 MINT:MINT-1794034 STRING:Q63347 PhosphoSite:Q63347
PRIDE:Q63347 GeneID:25581 KEGG:rno:25581 InParanoid:Q63347
NextBio:607227 Genevestigator:Q63347 GermOnline:ENSRNOG00000012026
Uniprot:Q63347
Length = 433
Score = 770 (276.1 bits), Expect = 1.9e-76, P = 1.9e-76
Identities = 154/301 (51%), Positives = 203/301 (67%)
Query: 124 VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELV 183
V P ++ G VGV+++ Y I LP + D V M+V+EKP Y+D+GG ++QI++L
Sbjct: 129 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLR 188
Query: 184 EAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM 243
E + P+ H ERF LG+ PPKGVLL+GPPGTGKTL ARA A +T+A F+ + G +LVQ
Sbjct: 189 EVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIPVIGSELVQK 248
Query: 244 FIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDG 303
++G+GA++VR+ F++A+ K C+IF DEIDAIG RFD GD EVQRTMLEL+NQLDG
Sbjct: 249 YVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDG 308
Query: 304 FSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDV 363
F IKV+ ATNR D LDPALMR GRLDRKIEF P E R I +IH+R M+V D+
Sbjct: 309 FDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDI 368
Query: 364 NFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGI---IQVQAKKKASLN 420
FE LAR + GA++++VC EAGM A+R +DF E + I+ AK A+
Sbjct: 369 RFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPR 428
Query: 421 Y 421
Y
Sbjct: 429 Y 429
>FB|FBgn0028687 [details] [associations]
symbol:Rpt1 "Regulatory particle triple-A ATPase 1"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE013599 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
KO:K03061 OMA:DIRWELI GeneTree:ENSGT00550000074978 HSSP:Q9LCZ4
EMBL:AF145307 EMBL:AY061606 RefSeq:NP_477473.1 UniGene:Dm.3425
SMR:Q7KMQ0 IntAct:Q7KMQ0 STRING:Q7KMQ0 EnsemblMetazoa:FBtr0088947
GeneID:35701 KEGG:dme:Dmel_CG1341 UCSC:CG1341-RA CTD:35701
FlyBase:FBgn0028687 HOGENOM:HOG000237377 InParanoid:Q7KMQ0
OrthoDB:EOG4X3FGQ GenomeRNAi:35701 NextBio:794815 Uniprot:Q7KMQ0
Length = 433
Score = 769 (275.8 bits), Expect = 2.4e-76, P = 2.4e-76
Identities = 152/308 (49%), Positives = 209/308 (67%)
Query: 120 VVGLVD---PDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLE 176
VV L D P ++ G VGV+++ Y I LP + D V M+V++KP Y+D+GG +
Sbjct: 122 VVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEDKPDVTYSDVGGCK 181
Query: 177 KQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLA 236
+QI++L E + P+ H E+F LG+ PPKGVLL+GPPGTGKTL ARA A +T+A F+++
Sbjct: 182 EQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 241
Query: 237 GPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLE 296
G +LVQ ++G+GA++VR+ F++A+ K C+IF DEIDAIG RFD GD EVQRTMLE
Sbjct: 242 GSELVQKYVGEGARMVRELFEMARSKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLE 301
Query: 297 LLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRK 356
L+NQLDGF IKV+ ATNR D LDPALMR GRLDRK+EF P ++ R+ I +IH+R
Sbjct: 302 LINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDQDGRSHIFKIHARS 361
Query: 357 MNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGI---IQVQA 413
M+V D+ F+ LAR + GA++++VC EAGM A+R +DF E + I+ A
Sbjct: 362 MSVERDIRFDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAVKKVIKSYA 421
Query: 414 KKKASLNY 421
K A+ Y
Sbjct: 422 KFSATPRY 429
>WB|WBGene00015688 [details] [associations]
symbol:C10G11.8 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 HSSP:Q9LCZ4 EMBL:FO080499 PIR:D87802
RefSeq:NP_491811.1 ProteinModelPortal:P91025 SMR:P91025
STRING:P91025 PaxDb:P91025 EnsemblMetazoa:C10G11.8 GeneID:172324
KEGG:cel:CELE_C10G11.8 UCSC:C10G11.8 CTD:172324 WormBase:C10G11.8
InParanoid:P91025 OMA:RGIENAN NextBio:875027 Uniprot:P91025
Length = 438
Score = 767 (275.1 bits), Expect = 3.9e-76, P = 3.9e-76
Identities = 156/327 (47%), Positives = 214/327 (65%)
Query: 96 DLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYL------ILDTLP 149
+L K VV++ S R+ ++P++ +VD D L+ LV V I+ L
Sbjct: 104 ELFDDEKHAVVVVEGSRREW-YVPILSIVDKDLLRLNALVMVKAGGMFKTVPSAIVGVLD 162
Query: 150 SEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLL 209
+ DS +V++ P E ++DIGG E QIQEL E++ LP+TH E ++++G+ PKGV+L
Sbjct: 163 DKIDSNAMGHKVEKTPKETFDDIGGCESQIQELKESVELPLTHPEYYEEMGITAPKGVIL 222
Query: 210 YGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFI 269
YG PGTGKTL+A+A A T+ATF++ G LVQ G+GA+LVR FQ+AKE++P I+FI
Sbjct: 223 YGEPGTGKTLLAKAVANSTSATFIRATGSDLVQKQSGEGARLVRQIFQMAKEQAPSIVFI 282
Query: 270 DEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRS 329
DEIDA+GTKRFD+ G++EVQRT+LELLNQLDGF S +K+I ATNR D LDPAL+R
Sbjct: 283 DEIDAVGTKRFDTSSRGEQEVQRTLLELLNQLDGFESRGDVKIIMATNRIDSLDPALIRP 342
Query: 330 GRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGM 389
GR+DRKIE P P E+ R +I IH+ M + V +E + +GA++KAVC EAGM
Sbjct: 343 GRIDRKIELPKPDEKTRQKIFTIHTSGMTIQKAVTYENVLGKEKSISGAEIKAVCTEAGM 402
Query: 390 LALRRDATEVNHEDFNEGIIQVQAKKK 416
LALR V +DF + + V KK
Sbjct: 403 LALRAQRKCVGTDDFEKAVKSVMLSKK 429
>WB|WBGene00004501 [details] [associations]
symbol:rpt-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0016887 GO:GO:0000502 GO:GO:0006511 EMBL:Z78012
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 PIR:T20152
RefSeq:NP_506005.1 ProteinModelPortal:Q18787 SMR:Q18787
IntAct:Q18787 MINT:MINT-212537 STRING:Q18787 PaxDb:Q18787
PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1 EnsemblMetazoa:C52E4.4.2
GeneID:179641 KEGG:cel:CELE_C52E4.4 UCSC:C52E4.4.1 CTD:179641
WormBase:C52E4.4 InParanoid:Q18787 NextBio:906264 Uniprot:Q18787
Length = 435
Score = 766 (274.7 bits), Expect = 5.0e-76, P = 5.0e-76
Identities = 154/308 (50%), Positives = 209/308 (67%)
Query: 120 VVGLVD---PDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLE 176
VV L D P ++ G VGV+++ Y I LP++ D V M+V+EKP Y+D+GG +
Sbjct: 124 VVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEKPDVTYSDVGGCK 183
Query: 177 KQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLA 236
QI++L E + P+ H ER+ LG+ PPKGVLLYGPPGTGKTL ARA A +T+A F+++
Sbjct: 184 DQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDACFIRVI 243
Query: 237 GPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLE 296
G +LVQ ++G+GA++VR+ F++A+ K C+IF DEIDA+G RFD GD EVQRTMLE
Sbjct: 244 GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQGGDNEVQRTMLE 303
Query: 297 LLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRK 356
L+NQLDGF IKV+ ATNR D LDPALMR GRLDRK+EF P RA IL+IH+++
Sbjct: 304 LINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDLAGRAHILKIHAKQ 363
Query: 357 MNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV---QA 413
M+V D+ ++ LAR + GA++++VC EAGM A+R +DF E I +V A
Sbjct: 364 MSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAINKVVKGYA 423
Query: 414 KKKASLNY 421
K A+ Y
Sbjct: 424 KFSATPRY 431
>UNIPROTKB|Q18787 [details] [associations]
symbol:rpt-1 "26S protease regulatory subunit 7"
species:6239 "Caenorhabditis elegans" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0016887 GO:GO:0000502
GO:GO:0006511 EMBL:Z78012 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
GeneTree:ENSGT00550000074978 PIR:T20152 RefSeq:NP_506005.1
ProteinModelPortal:Q18787 SMR:Q18787 IntAct:Q18787 MINT:MINT-212537
STRING:Q18787 PaxDb:Q18787 PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1
EnsemblMetazoa:C52E4.4.2 GeneID:179641 KEGG:cel:CELE_C52E4.4
UCSC:C52E4.4.1 CTD:179641 WormBase:C52E4.4 InParanoid:Q18787
NextBio:906264 Uniprot:Q18787
Length = 435
Score = 766 (274.7 bits), Expect = 5.0e-76, P = 5.0e-76
Identities = 154/308 (50%), Positives = 209/308 (67%)
Query: 120 VVGLVD---PDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLE 176
VV L D P ++ G VGV+++ Y I LP++ D V M+V+EKP Y+D+GG +
Sbjct: 124 VVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEKPDVTYSDVGGCK 183
Query: 177 KQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLA 236
QI++L E + P+ H ER+ LG+ PPKGVLLYGPPGTGKTL ARA A +T+A F+++
Sbjct: 184 DQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDACFIRVI 243
Query: 237 GPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLE 296
G +LVQ ++G+GA++VR+ F++A+ K C+IF DEIDA+G RFD GD EVQRTMLE
Sbjct: 244 GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQGGDNEVQRTMLE 303
Query: 297 LLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRK 356
L+NQLDGF IKV+ ATNR D LDPALMR GRLDRK+EF P RA IL+IH+++
Sbjct: 304 LINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDLAGRAHILKIHAKQ 363
Query: 357 MNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV---QA 413
M+V D+ ++ LAR + GA++++VC EAGM A+R +DF E I +V A
Sbjct: 364 MSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAINKVVKGYA 423
Query: 414 KKKASLNY 421
K A+ Y
Sbjct: 424 KFSATPRY 431
>UNIPROTKB|B7Z5E2 [details] [associations]
symbol:PSMC2 "cDNA FLJ52353, highly similar to 26S protease
regulatory subunit 7" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0030163 GO:GO:0017111 GO:GO:0008233 EMBL:AC004668
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 UniGene:Hs.437366
HGNC:HGNC:9548 ChiTaRS:PSMC2 EMBL:AC093701 EMBL:AK298821
IPI:IPI01015219 SMR:B7Z5E2 STRING:B7Z5E2 Ensembl:ENST00000544811
Uniprot:B7Z5E2
Length = 296
Score = 763 (273.6 bits), Expect = 1.0e-75, P = 1.0e-75
Identities = 151/290 (52%), Positives = 199/290 (68%)
Query: 135 VGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKE 194
VGV+++ Y I LP + D V M+V+EKP Y+D+GG ++QI++L E + P+ H E
Sbjct: 3 VGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPE 62
Query: 195 RFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRD 254
RF LG+ PPKGVLL+GPPGTGKTL ARA A +T+A F+++ G +LVQ ++G+GA++VR+
Sbjct: 63 RFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRE 122
Query: 255 AFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIA 314
F++A+ K C+IF DEIDAIG RFD GD EVQRTMLEL+NQLDGF IKV+
Sbjct: 123 LFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLM 182
Query: 315 ATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDD 374
ATNR D LDPALMR GRLDRKIEF P E R I +IH+R M+V D+ FE LAR +
Sbjct: 183 ATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPN 242
Query: 375 FNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGI---IQVQAKKKASLNY 421
GA++++VC EAGM A+R +DF E + I+ AK A+ Y
Sbjct: 243 STGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRY 292
>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
symbol:PFD0665c "26s proteasome aaa-ATPase
subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
Uniprot:Q8I1V1
Length = 392
Score = 762 (273.3 bits), Expect = 1.3e-75, P = 1.3e-75
Identities = 142/316 (44%), Positives = 209/316 (66%)
Query: 107 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 166
++ ++ ++ ++ ++ + LKP V +++ S+ I++ LPSE DS ++ +++ E+P
Sbjct: 75 IVSSTAGSNYYVRILSTLNKEDLKPSVSVALHRHSHSIVNILPSESDSSIQLLQITERPN 134
Query: 167 EDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAA 226
Y D+GGL+ Q QE+ EA+ LP+T E ++K+G+ PP G+L+YGPPGTGKT++ +A A
Sbjct: 135 VKYTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAVAN 194
Query: 227 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSG 286
+T TF+ + G + VQ ++G+G ++VRD F+LA+E SP IIFIDE+DAI TKRFD++
Sbjct: 195 ETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVDAIATKRFDAQTGA 254
Query: 287 DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 346
DREVQR +LELLNQ+DGF +KVI ATNRAD LDPAL+R GRLDRKIEFP P + +
Sbjct: 255 DREVQRILLELLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRKQK 314
Query: 347 ARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 406
I Q KMNV DVN E TD + A + A+ EAGM A+R++ + DF +
Sbjct: 315 RLIFQTIISKMNVSSDVNIESFVVRTDKISAADIAAIAQEAGMQAIRKNRYIITANDFEQ 374
Query: 407 GIIQVQAKKKASLNYY 422
G K+ +Y
Sbjct: 375 GYRTHVRKQLRDYEFY 390
>UNIPROTKB|Q8I1V1 [details] [associations]
symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
Length = 392
Score = 762 (273.3 bits), Expect = 1.3e-75, P = 1.3e-75
Identities = 142/316 (44%), Positives = 209/316 (66%)
Query: 107 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 166
++ ++ ++ ++ ++ + LKP V +++ S+ I++ LPSE DS ++ +++ E+P
Sbjct: 75 IVSSTAGSNYYVRILSTLNKEDLKPSVSVALHRHSHSIVNILPSESDSSIQLLQITERPN 134
Query: 167 EDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAA 226
Y D+GGL+ Q QE+ EA+ LP+T E ++K+G+ PP G+L+YGPPGTGKT++ +A A
Sbjct: 135 VKYTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAVAN 194
Query: 227 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSG 286
+T TF+ + G + VQ ++G+G ++VRD F+LA+E SP IIFIDE+DAI TKRFD++
Sbjct: 195 ETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVDAIATKRFDAQTGA 254
Query: 287 DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 346
DREVQR +LELLNQ+DGF +KVI ATNRAD LDPAL+R GRLDRKIEFP P + +
Sbjct: 255 DREVQRILLELLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRKQK 314
Query: 347 ARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 406
I Q KMNV DVN E TD + A + A+ EAGM A+R++ + DF +
Sbjct: 315 RLIFQTIISKMNVSSDVNIESFVVRTDKISAADIAAIAQEAGMQAIRKNRYIITANDFEQ 374
Query: 407 GIIQVQAKKKASLNYY 422
G K+ +Y
Sbjct: 375 GYRTHVRKQLRDYEFY 390
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 760 (272.6 bits), Expect = 2.1e-75, P = 2.1e-75
Identities = 165/363 (45%), Positives = 230/363 (63%)
Query: 74 GNIVEILEMNPEDEAEEDGANIDLDS-QRKGKCV--VLKTSTRQTIFL-----P--VVGL 123
G + E+ E E + + + DL + Q G+ V VLK T + + P VVG
Sbjct: 24 GRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGC 83
Query: 124 ---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ 180
+D KLKPG V ++ + I+ LP E D V M ++ Y++IGGL +QI+
Sbjct: 84 RRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIR 143
Query: 181 ELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL 240
EL E I LP+T+ E FQ++G+ PPKG LLYGPPGTGKTL+ARA A+Q + FLK+ +
Sbjct: 144 ELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSI 203
Query: 241 VQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300
V +IG+ A+L+R+ F A++ PCIIF+DEIDAIG +RF S DRE+QRT++ELLNQ
Sbjct: 204 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 263
Query: 301 LDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVH 360
+DGF + R+K+I ATNR D LDPAL+R GRLDRKI P E+AR IL+IH+ + H
Sbjct: 264 MDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKH 323
Query: 361 PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK--AS 418
++++E + + +D FNGA L+ VC EAGM A+R D V EDF + + +V KK +
Sbjct: 324 GEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESK 383
Query: 419 LNY 421
L+Y
Sbjct: 384 LDY 386
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 760 (272.6 bits), Expect = 2.1e-75, P = 2.1e-75
Identities = 165/363 (45%), Positives = 230/363 (63%)
Query: 74 GNIVEILEMNPEDEAEEDGANIDLDS-QRKGKCV--VLKTSTRQTIFL-----P--VVGL 123
G + E+ E E + + + DL + Q G+ V VLK T + + P VVG
Sbjct: 30 GRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGC 89
Query: 124 ---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ 180
+D KLKPG V ++ + I+ LP E D V M ++ Y++IGGL +QI+
Sbjct: 90 RRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIR 149
Query: 181 ELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL 240
EL E I LP+T+ E FQ++G+ PPKG LLYGPPGTGKTL+ARA A+Q + FLK+ +
Sbjct: 150 ELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSI 209
Query: 241 VQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300
V +IG+ A+L+R+ F A++ PCIIF+DEIDAIG +RF S DRE+QRT++ELLNQ
Sbjct: 210 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 269
Query: 301 LDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVH 360
+DGF + R+K+I ATNR D LDPAL+R GRLDRKI P E+AR IL+IH+ + H
Sbjct: 270 MDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKH 329
Query: 361 PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK--AS 418
++++E + + +D FNGA L+ VC EAGM A+R D V EDF + + +V KK +
Sbjct: 330 GEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESK 389
Query: 419 LNY 421
L+Y
Sbjct: 390 LDY 392
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 760 (272.6 bits), Expect = 2.1e-75, P = 2.1e-75
Identities = 165/363 (45%), Positives = 230/363 (63%)
Query: 74 GNIVEILEMNPEDEAEEDGANIDLDS-QRKGKCV--VLKTSTRQTIFL-----P--VVGL 123
G + E+ E E + + + DL + Q G+ V VLK T + + P VVG
Sbjct: 24 GRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGC 83
Query: 124 ---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ 180
+D KLKPG V ++ + I+ LP E D V M ++ Y++IGGL +QI+
Sbjct: 84 RRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIR 143
Query: 181 ELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL 240
EL E I LP+T+ E FQ++G+ PPKG LLYGPPGTGKTL+ARA A+Q + FLK+ +
Sbjct: 144 ELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSI 203
Query: 241 VQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300
V +IG+ A+L+R+ F A++ PCIIF+DEIDAIG +RF S DRE+QRT++ELLNQ
Sbjct: 204 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 263
Query: 301 LDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVH 360
+DGF + R+K+I ATNR D LDPAL+R GRLDRKI P E+AR IL+IH+ + H
Sbjct: 264 MDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKH 323
Query: 361 PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK--AS 418
++++E + + +D FNGA L+ VC EAGM A+R D V EDF + + +V KK +
Sbjct: 324 GEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESK 383
Query: 419 LNY 421
L+Y
Sbjct: 384 LDY 386
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 760 (272.6 bits), Expect = 2.1e-75, P = 2.1e-75
Identities = 165/363 (45%), Positives = 230/363 (63%)
Query: 74 GNIVEILEMNPEDEAEEDGANIDLDS-QRKGKCV--VLKTSTRQTIFL-----P--VVGL 123
G + E+ E E + + + DL + Q G+ V VLK T + + P VVG
Sbjct: 38 GRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGC 97
Query: 124 ---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ 180
+D KLKPG V ++ + I+ LP E D V M ++ Y++IGGL +QI+
Sbjct: 98 RRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIR 157
Query: 181 ELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL 240
EL E I LP+T+ E FQ++G+ PPKG LLYGPPGTGKTL+ARA A+Q + FLK+ +
Sbjct: 158 ELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSI 217
Query: 241 VQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300
V +IG+ A+L+R+ F A++ PCIIF+DEIDAIG +RF S DRE+QRT++ELLNQ
Sbjct: 218 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 277
Query: 301 LDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVH 360
+DGF + R+K+I ATNR D LDPAL+R GRLDRKI P E+AR IL+IH+ + H
Sbjct: 278 MDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKH 337
Query: 361 PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK--AS 418
++++E + + +D FNGA L+ VC EAGM A+R D V EDF + + +V KK +
Sbjct: 338 GEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESK 397
Query: 419 LNY 421
L+Y
Sbjct: 398 LDY 400
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 760 (272.6 bits), Expect = 2.1e-75, P = 2.1e-75
Identities = 165/363 (45%), Positives = 230/363 (63%)
Query: 74 GNIVEILEMNPEDEAEEDGANIDLDS-QRKGKCV--VLKTSTRQTIFL-----P--VVGL 123
G + E+ E E + + + DL + Q G+ V VLK T + + P VVG
Sbjct: 24 GRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGC 83
Query: 124 ---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ 180
+D KLKPG V ++ + I+ LP E D V M ++ Y++IGGL +QI+
Sbjct: 84 RRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIR 143
Query: 181 ELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL 240
EL E I LP+T+ E FQ++G+ PPKG LLYGPPGTGKTL+ARA A+Q + FLK+ +
Sbjct: 144 ELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSI 203
Query: 241 VQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300
V +IG+ A+L+R+ F A++ PCIIF+DEIDAIG +RF S DRE+QRT++ELLNQ
Sbjct: 204 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 263
Query: 301 LDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVH 360
+DGF + R+K+I ATNR D LDPAL+R GRLDRKI P E+AR IL+IH+ + H
Sbjct: 264 MDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKH 323
Query: 361 PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK--AS 418
++++E + + +D FNGA L+ VC EAGM A+R D V EDF + + +V KK +
Sbjct: 324 GEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESK 383
Query: 419 LNY 421
L+Y
Sbjct: 384 LDY 386
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 760 (272.6 bits), Expect = 2.1e-75, P = 2.1e-75
Identities = 165/363 (45%), Positives = 230/363 (63%)
Query: 74 GNIVEILEMNPEDEAEEDGANIDLDS-QRKGKCV--VLKTSTRQTIFL-----P--VVGL 123
G + E+ E E + + + DL + Q G+ V VLK T + + P VVG
Sbjct: 24 GRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGC 83
Query: 124 ---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ 180
+D KLKPG V ++ + I+ LP E D V M ++ Y++IGGL +QI+
Sbjct: 84 RRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIR 143
Query: 181 ELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL 240
EL E I LP+T+ E FQ++G+ PPKG LLYGPPGTGKTL+ARA A+Q + FLK+ +
Sbjct: 144 ELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSI 203
Query: 241 VQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300
V +IG+ A+L+R+ F A++ PCIIF+DEIDAIG +RF S DRE+QRT++ELLNQ
Sbjct: 204 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 263
Query: 301 LDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVH 360
+DGF + R+K+I ATNR D LDPAL+R GRLDRKI P E+AR IL+IH+ + H
Sbjct: 264 MDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKH 323
Query: 361 PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK--AS 418
++++E + + +D FNGA L+ VC EAGM A+R D V EDF + + +V KK +
Sbjct: 324 GEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESK 383
Query: 419 LNY 421
L+Y
Sbjct: 384 LDY 386
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 760 (272.6 bits), Expect = 2.1e-75, P = 2.1e-75
Identities = 165/363 (45%), Positives = 230/363 (63%)
Query: 74 GNIVEILEMNPEDEAEEDGANIDLDS-QRKGKCV--VLKTSTRQTIFL-----P--VVGL 123
G + E+ E E + + + DL + Q G+ V VLK T + + P VVG
Sbjct: 16 GRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGC 75
Query: 124 ---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ 180
+D KLKPG V ++ + I+ LP E D V M ++ Y++IGGL +QI+
Sbjct: 76 RRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIR 135
Query: 181 ELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL 240
EL E I LP+T+ E FQ++G+ PPKG LLYGPPGTGKTL+ARA A+Q + FLK+ +
Sbjct: 136 ELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSI 195
Query: 241 VQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300
V +IG+ A+L+R+ F A++ PCIIF+DEIDAIG +RF S DRE+QRT++ELLNQ
Sbjct: 196 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 255
Query: 301 LDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVH 360
+DGF + R+K+I ATNR D LDPAL+R GRLDRKI P E+AR IL+IH+ + H
Sbjct: 256 MDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKH 315
Query: 361 PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK--AS 418
++++E + + +D FNGA L+ VC EAGM A+R D V EDF + + +V KK +
Sbjct: 316 GEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESK 375
Query: 419 LNY 421
L+Y
Sbjct: 376 LDY 378
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 760 (272.6 bits), Expect = 2.1e-75, P = 2.1e-75
Identities = 165/363 (45%), Positives = 230/363 (63%)
Query: 74 GNIVEILEMNPEDEAEEDGANIDLDS-QRKGKCV--VLKTSTRQTIFL-----P--VVGL 123
G + E+ E E + + + DL + Q G+ V VLK T + + P VVG
Sbjct: 38 GRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGC 97
Query: 124 ---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ 180
+D KLKPG V ++ + I+ LP E D V M ++ Y++IGGL +QI+
Sbjct: 98 RRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIR 157
Query: 181 ELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL 240
EL E I LP+T+ E FQ++G+ PPKG LLYGPPGTGKTL+ARA A+Q + FLK+ +
Sbjct: 158 ELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSI 217
Query: 241 VQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300
V +IG+ A+L+R+ F A++ PCIIF+DEIDAIG +RF S DRE+QRT++ELLNQ
Sbjct: 218 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 277
Query: 301 LDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVH 360
+DGF + R+K+I ATNR D LDPAL+R GRLDRKI P E+AR IL+IH+ + H
Sbjct: 278 MDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKH 337
Query: 361 PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK--AS 418
++++E + + +D FNGA L+ VC EAGM A+R D V EDF + + +V KK +
Sbjct: 338 GEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESK 397
Query: 419 LNY 421
L+Y
Sbjct: 398 LDY 400
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 760 (272.6 bits), Expect = 2.1e-75, P = 2.1e-75
Identities = 152/313 (48%), Positives = 208/313 (66%)
Query: 104 KCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDE 163
K V++K + V ++ LK V + DSY++ L ++ D V M V++
Sbjct: 82 KKVLVKVQPEGKYIVDVAKDINVKDLKASQRVCLRSDSYMLHKVLENKADPLVSLMMVEK 141
Query: 164 KPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARA 223
P Y+ +GGL KQI+E+ E I LP+ H E F+ LG+ PKGV+LYGPPGTGKTL+ARA
Sbjct: 142 VPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARA 201
Query: 224 CAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSE 283
A T+ F++++G +LVQ +IG+G+++VR+ F +A+E +P IIF+DEID+IG+ R +
Sbjct: 202 VAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGS 261
Query: 284 VSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTE 343
GD EVQRTMLELLNQLDGF + IK+I ATNR DILDPAL+R GR+DRKIEFP P+
Sbjct: 262 GGGDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSV 321
Query: 344 EARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 403
ARA IL+IHSRKMN+ +N ++A + +GA +K VC EAGM ALR V ED
Sbjct: 322 AARAEILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQED 381
Query: 404 FNEGIIQVQAKKK 416
F + +V K +
Sbjct: 382 FELAVGKVMNKNQ 394
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 759 (272.2 bits), Expect = 2.7e-75, P = 2.7e-75
Identities = 165/363 (45%), Positives = 230/363 (63%)
Query: 74 GNIVEILEMNPEDEAEEDGANIDLDS-QRKGKCV--VLKTSTRQTIFL-----P--VVGL 123
G + E+ E E + + + DL + Q G+ V VLK T + + P VVG
Sbjct: 38 GRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGC 97
Query: 124 ---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ 180
+D KLKPG V ++ + I+ LP E D V M ++ Y++IGGL +QI+
Sbjct: 98 RRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDVSYSEIGGLSEQIR 157
Query: 181 ELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL 240
EL E I LP+T+ E FQ++G+ PPKG LLYGPPGTGKTL+ARA A+Q + FLK+ +
Sbjct: 158 ELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSI 217
Query: 241 VQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300
V +IG+ A+L+R+ F A++ PCIIF+DEIDAIG +RF S DRE+QRT++ELLNQ
Sbjct: 218 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 277
Query: 301 LDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVH 360
+DGF + R+K+I ATNR D LDPAL+R GRLDRKI P E+AR IL+IH+ + H
Sbjct: 278 MDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKH 337
Query: 361 PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK--AS 418
++++E + + +D FNGA L+ VC EAGM A+R D V EDF + + +V KK +
Sbjct: 338 GEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESK 397
Query: 419 LNY 421
L+Y
Sbjct: 398 LDY 400
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 759 (272.2 bits), Expect = 2.7e-75, P = 2.7e-75
Identities = 165/363 (45%), Positives = 230/363 (63%)
Query: 74 GNIVEILEMNPEDEAEEDGANIDLDS-QRKGKCV--VLKTSTRQTIFL-----P--VVGL 123
G + E+ E E + + + DL + Q G+ V VLK T + + P VVG
Sbjct: 24 GRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGC 83
Query: 124 ---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ 180
+D KLKPG V ++ + I+ LP E D V M ++ Y++IGGL +QI+
Sbjct: 84 RRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDVSYSEIGGLSEQIR 143
Query: 181 ELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL 240
EL E I LP+T+ E FQ++G+ PPKG LLYGPPGTGKTL+ARA A+Q + FLK+ +
Sbjct: 144 ELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSI 203
Query: 241 VQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300
V +IG+ A+L+R+ F A++ PCIIF+DEIDAIG +RF S DRE+QRT++ELLNQ
Sbjct: 204 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 263
Query: 301 LDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVH 360
+DGF + R+K+I ATNR D LDPAL+R GRLDRKI P E+AR IL+IH+ + H
Sbjct: 264 MDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKH 323
Query: 361 PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK--AS 418
++++E + + +D FNGA L+ VC EAGM A+R D V EDF + + +V KK +
Sbjct: 324 GEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESK 383
Query: 419 LNY 421
L+Y
Sbjct: 384 LDY 386
>ASPGD|ASPL0000036562 [details] [associations]
symbol:AN2904 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 TIGRFAMs:TIGR01242 EnsemblFungi:CADANIAT00010185
OMA:EDAYSAQ Uniprot:C8VJ79
Length = 422
Score = 736 (264.1 bits), Expect = 4.1e-75, Sum P(2) = 4.1e-75
Identities = 141/319 (44%), Positives = 215/319 (67%)
Query: 107 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 166
++++ST + ++ +D +KLKP V +++ S ++D LP E DS + + +EKP
Sbjct: 103 IVQSSTGSNYVVRILSTLDREKLKPSSSVALHRHSNALVDILPPEADSSIAMLGENEKPD 162
Query: 167 EDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAA 226
Y D+GGL+ Q QE+ EA+ LP+TH + ++++G+ PP+GVLLYGPPGTGKT++ +A A
Sbjct: 163 VTYADVGGLDMQKQEIREAVELPLTHFDLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 222
Query: 227 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSG 286
T A+F+++ G + VQ ++G+G ++VRD F++A+E SP IIFIDEIDAI TKRFD++
Sbjct: 223 STTASFIRVNGSEFVQKYLGEGPRMVRDVFRMARENSPAIIFIDEIDAIATKRFDAQTGA 282
Query: 287 DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 346
DREVQR +LELLNQ+DGF +KVI ATNRAD LDPAL+R GRLDRKIEFP +
Sbjct: 283 DREVQRILLELLNQMDGFEQTSNVKVIMATNRADTLDPALLRPGRLDRKIEFPSLRDRRE 342
Query: 347 ARIL-QIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFN 405
R++ + KM++ P+V+ + L + +GA + A+ EAG+ A+R++ + D
Sbjct: 343 RRLIFSTIASKMSLSPEVDLDSLIVRNEPLSGAVIAAIMQEAGLRAVRKNRYNIIQSDLE 402
Query: 406 EGI-IQVQAKKKAS-LNYY 422
+ QV+ ++A L +Y
Sbjct: 403 DAYSAQVKTGQEADRLEFY 421
Score = 40 (19.1 bits), Expect = 4.1e-75, Sum P(2) = 4.1e-75
Identities = 18/88 (20%), Positives = 31/88 (35%)
Query: 9 PNLEDDQLSSMTADDIVRASRL--LDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXX 66
PN+ D L ADD + L L + +K + + E S
Sbjct: 26 PNI--DSLEGTGADDGDEYATLKKLQRHLEYIKLQEEYIKDEQRSLKRELVRAQEEIKRI 83
Query: 67 XXLPYLVGNIVEILEMNPEDEAEEDGAN 94
+P ++G +E ++ N G+N
Sbjct: 84 QSVPLVIGQFMEAIDQNTGIVQSSTGSN 111
>CGD|CAL0005689 [details] [associations]
symbol:RPT1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005689 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000078 EMBL:AACQ01000077
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
RefSeq:XP_715876.1 RefSeq:XP_715926.1 ProteinModelPortal:Q5A2A0
STRING:Q5A2A0 GeneID:3642412 GeneID:3642461 KEGG:cal:CaO19.441
KEGG:cal:CaO19.8071 Uniprot:Q5A2A0
Length = 444
Score = 757 (271.5 bits), Expect = 4.5e-75, P = 4.5e-75
Identities = 149/295 (50%), Positives = 203/295 (68%)
Query: 120 VVGL---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLE 176
VVGL + P ++ G VGV++ Y I LP D V M V+EKP Y+D+GG +
Sbjct: 133 VVGLGERLSPTDIEEGMRVGVDRHKYEIQLPLPPRIDPSVTMMTVEEKPDVTYSDVGGCK 192
Query: 177 KQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLA 236
+QI++L E + LP+ ERF KLG+ PPKG+LLYGPPGTGKTL ARA A +T+ATF+++
Sbjct: 193 EQIEKLREVVELPLLSPERFVKLGIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRVI 252
Query: 237 GPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLE 296
G +LVQ ++G+GA++VR+ F++A+ K CIIF DE+DAIG RFD GD EVQRTMLE
Sbjct: 253 GSELVQKYVGEGARMVRELFEMARTKKACIIFFDEVDAIGGARFDDGAGGDNEVQRTMLE 312
Query: 297 LLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRK 356
L+ QLDGF IKV+ ATNR + LDPAL+R GR+DRK+EF P E RA I +IHS+
Sbjct: 313 LITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRANIFRIHSKT 372
Query: 357 MNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV 411
M+V D+ +E ++R + GA+L++VC EAGM A+R N +DF + + +V
Sbjct: 373 MSVEKDIRWELISRLCPNATGAELRSVCTEAGMFAIRARRKVANEKDFLKAVDKV 427
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 756 (271.2 bits), Expect = 5.7e-75, P = 5.7e-75
Identities = 165/363 (45%), Positives = 229/363 (63%)
Query: 74 GNIVEILEMNPEDEAEEDGANIDLDS-QRKGKCV--VLKTSTRQTIFL-----P--VVGL 123
G + E+ E E + + + DL + Q G+ V VLK T + + P VVG
Sbjct: 24 GRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGC 83
Query: 124 ---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ 180
+D KLKPG V ++ + I+ LP E D V M ++ Y++IGGL +QI+
Sbjct: 84 RRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIR 143
Query: 181 ELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL 240
EL E I LP+T+ E FQ++G+ PPKG LLYGPPGTGKTL+ARA A+Q + FLK+ +
Sbjct: 144 ELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSI 203
Query: 241 VQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300
V +IG+ A+L+R+ F A++ PCIIF+DEIDAIG +RF S DRE+QRT++ELLNQ
Sbjct: 204 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 263
Query: 301 LDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVH 360
+DGF + R+K+I ATNR D LDPAL+R GRLDRKI P E+AR IL+IH+ + H
Sbjct: 264 MDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKH 323
Query: 361 PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK--AS 418
++++E + + +D FNGA L VC EAGM A+R D V EDF + + +V KK +
Sbjct: 324 GEIDYEAIVKLSDGFNGADLGNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESK 383
Query: 419 LNY 421
L+Y
Sbjct: 384 LDY 386
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 747 (268.0 bits), Expect = 5.1e-74, P = 5.1e-74
Identities = 150/328 (45%), Positives = 217/328 (66%)
Query: 97 LDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRV 156
LD++R ++K S+ + VD +KL G V ++ + I+ TLP E D V
Sbjct: 71 LDNER----FIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRTLPREVDPVV 126
Query: 157 KAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTG 216
M ++ Y+ +GGL QI+EL E+I LP+ + E F ++G++PPKGVLLYGPPGTG
Sbjct: 127 YNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTG 186
Query: 217 KTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIG 276
KTL+ARA A+ +A FLK+ ++ +IG+ A+L+R+ F A++ PCIIF+DEIDAIG
Sbjct: 187 KTLLARAIASNIDANFLKIVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIG 246
Query: 277 TKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKI 336
+RF S DRE+QRT++ELLNQLDGF ++K+I ATNR D+LDPAL+R GRLDRKI
Sbjct: 247 GRRFSEGTSADREIQRTLMELLNQLDGFDELGKVKMIMATNRPDVLDPALLRPGRLDRKI 306
Query: 337 EFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA 396
E P P E+AR +L+IH+ + H ++++E + + + FNGA L+ VC EAGM A+R +
Sbjct: 307 EIPLPNEQARMEVLKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMAAIRAER 366
Query: 397 TEVNHEDFNEGIIQVQ-AKKKASLNYYA 423
V HEDF + + ++ AKK S +Y+
Sbjct: 367 DYVVHEDFMKAVRKLNDAKKLESSAHYS 394
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 747 (268.0 bits), Expect = 5.1e-74, P = 5.1e-74
Identities = 149/327 (45%), Positives = 219/327 (66%)
Query: 97 LDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRV 156
LD++R +++K S+ + VD +KL G V ++ + I+ LP E D V
Sbjct: 70 LDNER----LIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVV 125
Query: 157 KAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTG 216
M ++ Y+ +GGL QI+EL E+I LP+ + E F ++G++PPKGVLLYGPPGTG
Sbjct: 126 YNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTG 185
Query: 217 KTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIG 276
KTL+ARA A+ +A FLK+ ++ +IG+ A+L+R+ F A+E PCIIF+DEIDAIG
Sbjct: 186 KTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIG 245
Query: 277 TKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKI 336
+RF S DRE+QRT++ELLNQLDGF + ++K+I ATNR D+LDPAL+R GRLDRKI
Sbjct: 246 GRRFSEGTSADREIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGRLDRKI 305
Query: 337 EFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA 396
E P P E++R IL+IH+ + H ++++E + + + FNGA L+ +C EAGM A+R +
Sbjct: 306 EIPLPNEQSRMDILKIHAAGIAKHGEIDYEAIVKLAEGFNGADLRNICTEAGMFAIRAER 365
Query: 397 TEVNHEDFNEGIIQV-QAKKKASLNYY 422
V HEDF + + ++ +AKK S ++Y
Sbjct: 366 DYVIHEDFMKAVRKLSEAKKLESSSHY 392
>POMBASE|SPBC16C6.07c [details] [associations]
symbol:rpt1 "19S proteasome regulatory subunit Rpt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16C6.07c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03061
OMA:DIRWELI PIR:T39558 RefSeq:NP_596805.1 ProteinModelPortal:O42931
IntAct:O42931 STRING:O42931 PRIDE:O42931
EnsemblFungi:SPBC16C6.07c.1 GeneID:2539862 KEGG:spo:SPBC16C6.07c
OrthoDB:EOG4B01XN NextBio:20801008 Uniprot:O42931
Length = 438
Score = 746 (267.7 bits), Expect = 6.5e-74, P = 6.5e-74
Identities = 148/301 (49%), Positives = 204/301 (67%)
Query: 124 VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELV 183
V P ++ G VG +++ Y I LP + D V M+V+EKP Y D+GG ++QI+ L
Sbjct: 133 VSPTDIEEGMRVGCDRNKYAIQLPLPPKIDPSVTMMQVEEKPDVTYGDVGGCKEQIERLR 192
Query: 184 EAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM 243
E + LP+ ERF KLG+ PPKG++LYGPPGTGKTL ARA A +T+ATF+++ G +LVQ
Sbjct: 193 EVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQK 252
Query: 244 FIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDG 303
++G+GA++VR+ F++A+ K CIIF DEIDAIG RFD GD EVQRTMLEL+ QLDG
Sbjct: 253 YVGEGARMVRELFEMARTKKACIIFFDEIDAIGGARFDDGAGGDNEVQRTMLELITQLDG 312
Query: 304 FSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDV 363
F IKV+ ATNR + LD ALMR GR+DRK+EF P E RA IL+IH++ M + D+
Sbjct: 313 FDPRGNIKVLFATNRPNTLDEALMRPGRIDRKVEFGLPDLEGRAHILRIHAKSMAIDKDI 372
Query: 364 NFEELARSTDDFNGAQLKAVCVEAGMLALR---RDATEVNHEDFNEGIIQVQAKKKASLN 420
+E +AR GA+L++VC EAGM A+R R ATE + D + +++ K ++ +
Sbjct: 373 RWELIARLCPSQTGAELRSVCTEAGMFAIRARRRVATEKDFLDAVQKVVKGNQKFSSTAD 432
Query: 421 Y 421
Y
Sbjct: 433 Y 433
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 746 (267.7 bits), Expect = 6.5e-74, P = 6.5e-74
Identities = 149/327 (45%), Positives = 218/327 (66%)
Query: 97 LDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRV 156
LD++R +++K S+ + VD +KL G V ++ + I+ LP E D V
Sbjct: 70 LDNER----LIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVV 125
Query: 157 KAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTG 216
M ++ Y+ +GGL QI+EL E+I LP+ + E F ++G++PPKGVLLYGPPGTG
Sbjct: 126 YNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTG 185
Query: 217 KTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIG 276
KTL+ARA A+ +A FLK+ ++ +IG+ A+L+R+ F A+E PCIIF+DEIDAIG
Sbjct: 186 KTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIG 245
Query: 277 TKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKI 336
+RF S DRE+QRT++ELLNQLDGF ++K+I ATNR D+LDPAL+R GRLDRKI
Sbjct: 246 GRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKI 305
Query: 337 EFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA 396
E P P E++R IL+IH+ + H ++++E + + + FNGA L+ +C EAGM A+R +
Sbjct: 306 EIPLPNEQSRMEILKIHASGIAKHGEIDYEAIVKLGEGFNGADLRNICTEAGMFAIRAER 365
Query: 397 TEVNHEDFNEGIIQV-QAKKKASLNYY 422
V HEDF + + ++ +AKK S ++Y
Sbjct: 366 DYVIHEDFMKAVRKLSEAKKLESSSHY 392
>SGD|S000001628 [details] [associations]
symbol:RPT1 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IMP] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IDA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000001628 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:BK006944 GO:GO:0006511 GO:GO:0017111
GO:GO:0045899 GO:GO:0045732 PDB:3VLF PDB:4A3V PDBsum:3VLF
PDBsum:4A3V GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 OrthoDB:EOG4B01XN
EMBL:Z22817 EMBL:X73571 EMBL:Z28145 PIR:S34354 RefSeq:NP_012777.1
ProteinModelPortal:P33299 SMR:P33299 DIP:DIP-2883N IntAct:P33299
MINT:MINT-612502 STRING:P33299 SWISS-2DPAGE:P33299 PaxDb:P33299
PeptideAtlas:P33299 PRIDE:P33299 EnsemblFungi:YKL145W GeneID:853712
KEGG:sce:YKL145W CYGD:YKL145w NextBio:974719 Genevestigator:P33299
GermOnline:YKL145W Uniprot:P33299
Length = 467
Score = 745 (267.3 bits), Expect = 8.4e-74, P = 8.4e-74
Identities = 157/345 (45%), Positives = 218/345 (63%)
Query: 83 NPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGL---VDPDKLKPGDLVGVNK 139
N + + + D D + + LK + F VVGL V P ++ G VGV++
Sbjct: 124 NSNSNSNQQSTDADEDDEDAKYVINLKQIAK---F--VVGLGERVSPTDIEEGMRVGVDR 178
Query: 140 DSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKL 199
Y I LP D V M V+EKP Y+D+GG + QI++L E + LP+ ERF L
Sbjct: 179 SKYNIELPLPPRIDPSVTMMTVEEKPDVTYSDVGGCKDQIEKLREVVELPLLSPERFATL 238
Query: 200 GVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLA 259
G+ PPKG+LLYGPPGTGKTL ARA A +T+ATF+++ G +LVQ ++G+GA++VR+ F++A
Sbjct: 239 GIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMA 298
Query: 260 KEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRA 319
+ K CIIF DEIDA+G RFD GD EVQRTMLEL+ QLDGF IKV+ ATNR
Sbjct: 299 RTKKACIIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRP 358
Query: 320 DILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQ 379
+ LDPAL+R GR+DRK+EF P E RA I +IHS+ M+V + +E ++R + GA+
Sbjct: 359 NTLDPALLRPGRIDRKVEFSLPDLEGRANIFRIHSKSMSVERGIRWELISRLCPNSTGAE 418
Query: 380 LKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQA--KKKASLNYY 422
L++VC EAGM A+R +DF + + +V + KK +S + Y
Sbjct: 419 LRSVCTEAGMFAIRARRKVATEKDFLKAVDKVISGYKKFSSTSRY 463
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 737 (264.5 bits), Expect = 5.9e-73, P = 5.9e-73
Identities = 155/329 (47%), Positives = 212/329 (64%)
Query: 97 LDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRV 156
LD +R ++K S+ + VD KLK G V ++ + I+ LP E D V
Sbjct: 68 LDEER----FIVKASSGPRYVVGCRSKVDRSKLKQGTRVALDMTTLTIMRMLPREVDPLV 123
Query: 157 KAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTG 216
M +++ ++ IGGL QI+EL E I LP+ + E FQ++G++PPKGVLLYGPPGTG
Sbjct: 124 YNMSLEDPGQINFAGIGGLNDQIRELREVIELPLKNPELFQRVGIKPPKGVLLYGPPGTG 183
Query: 217 KTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIG 276
KTL+ARA A+ FLK+ +V +IG+ A+L+R+ F AKE PCIIF+DEIDAIG
Sbjct: 184 KTLLARAVASSMETNFLKVVSSAIVDKYIGESARLIREMFGYAKEHEPCIIFMDEIDAIG 243
Query: 277 TKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKI 336
+RF S DRE+QRT++ELLNQLDGF + K+I ATNR D LDPAL+R+GRLDRKI
Sbjct: 244 GRRFSEGTSADREIQRTLMELLNQLDGFDYLGKTKIIMATNRPDTLDPALLRAGRLDRKI 303
Query: 337 EFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR--R 394
E P P E R IL+IHS + + D++FE + + +D NGA L+ V EAG+ A++ R
Sbjct: 304 EIPLPNEVGRLEILKIHSSTVQMEGDIDFESVVKMSDGLNGADLRNVVTEAGLFAIKDYR 363
Query: 395 DATEVNHEDFNEGIIQV-QAKK-KASLNY 421
DA +N +DFN + +V +AKK + L Y
Sbjct: 364 DA--INQDDFNRAVRKVAEAKKLEGKLEY 390
>GENEDB_PFALCIPARUM|PF13_0063 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory
subunit 7, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511
GO:GO:0017111 EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0005838 KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177
RefSeq:XP_001349843.2 ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3
MINT:MINT-1698409 PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA
GeneID:814041 KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500
Uniprot:Q8IEK3
Length = 420
Score = 736 (264.1 bits), Expect = 7.5e-73, P = 7.5e-73
Identities = 147/287 (51%), Positives = 194/287 (67%)
Query: 120 VVGLVD---PDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLE 176
VVGL D P ++ G VGV++ Y I LP + D V M V+EKP YNDIGG +
Sbjct: 109 VVGLGDKVAPSDIEEGMRVGVDRTKYKIQILLPPKIDPSVTMMTVEEKPDITYNDIGGCK 168
Query: 177 KQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLA 236
+Q+++L E + +P+ ERF LG+ PPKGVLLYGPPGTGKTL ARA A +T+A F+ +
Sbjct: 169 EQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTGKTLTARAIANRTDACFICVI 228
Query: 237 GPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLE 296
G +LVQ ++G+GA++VR+ FQ+AK K CI+FIDE+DAIG R D GD EVQRTMLE
Sbjct: 229 GSELVQKYVGEGARMVRELFQMAKSKKACILFIDEVDAIGGSRGDESAHGDHEVQRTMLE 288
Query: 297 LLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRK 356
++NQLDGF + IKV+ ATNR D LD AL+R GR+DR+IEF P E R I +IH+
Sbjct: 289 IVNQLDGFDNRGNIKVLMATNRPDTLDSALVRPGRIDRRIEFSLPDLEGRTHIFKIHANT 348
Query: 357 MNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 403
MN+ DV FE LAR + G+ +++VC EAGM A+R + +D
Sbjct: 349 MNMSRDVRFELLARLCPNSTGSDIRSVCTEAGMFAIRARRKTITEKD 395
>UNIPROTKB|Q8IEK3 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory subunit 7,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 GO:GO:0017111
EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0005838
KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177 RefSeq:XP_001349843.2
ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3 MINT:MINT-1698409
PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA GeneID:814041
KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500 Uniprot:Q8IEK3
Length = 420
Score = 736 (264.1 bits), Expect = 7.5e-73, P = 7.5e-73
Identities = 147/287 (51%), Positives = 194/287 (67%)
Query: 120 VVGLVD---PDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLE 176
VVGL D P ++ G VGV++ Y I LP + D V M V+EKP YNDIGG +
Sbjct: 109 VVGLGDKVAPSDIEEGMRVGVDRTKYKIQILLPPKIDPSVTMMTVEEKPDITYNDIGGCK 168
Query: 177 KQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLA 236
+Q+++L E + +P+ ERF LG+ PPKGVLLYGPPGTGKTL ARA A +T+A F+ +
Sbjct: 169 EQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTGKTLTARAIANRTDACFICVI 228
Query: 237 GPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLE 296
G +LVQ ++G+GA++VR+ FQ+AK K CI+FIDE+DAIG R D GD EVQRTMLE
Sbjct: 229 GSELVQKYVGEGARMVRELFQMAKSKKACILFIDEVDAIGGSRGDESAHGDHEVQRTMLE 288
Query: 297 LLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRK 356
++NQLDGF + IKV+ ATNR D LD AL+R GR+DR+IEF P E R I +IH+
Sbjct: 289 IVNQLDGFDNRGNIKVLMATNRPDTLDSALVRPGRIDRRIEFSLPDLEGRTHIFKIHANT 348
Query: 357 MNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 403
MN+ DV FE LAR + G+ +++VC EAGM A+R + +D
Sbjct: 349 MNMSRDVRFELLARLCPNSTGSDIRSVCTEAGMFAIRARRKTITEKD 395
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 734 (263.4 bits), Expect = 1.2e-72, P = 1.2e-72
Identities = 146/300 (48%), Positives = 203/300 (67%)
Query: 124 VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELV 183
+D KLK G V ++ + I+ LP E D V M ++ Y+ IGGL QI+EL
Sbjct: 95 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDVTYSAIGGLTDQIRELR 154
Query: 184 EAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM 243
E I LP+ + E F ++G+ PPKG LLYGPPGTGKTL+ARA A+Q +A FLK+ +V
Sbjct: 155 EVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDK 214
Query: 244 FIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDG 303
+IG+ A+L+R+ F A++ PCIIF+DEIDAIG +RF S DRE+QRT++ELLNQ+DG
Sbjct: 215 YIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDG 274
Query: 304 FSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDV 363
F S ++K+I ATNR D LDPAL+R GRLDRKIE P P E+AR IL+IH+ K+ H ++
Sbjct: 275 FDSLGQVKMIMATNRPDSLDPALLRPGRLDRKIEIPLPNEQARLEILKIHALKIAKHGEI 334
Query: 364 NFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK--ASLNY 421
++E + + +D+FNGA L+ VC EAG+ A+R + V DF + + +V KK + L+Y
Sbjct: 335 DYEAIVKLSDNFNGADLRNVCTEAGLFAIRAEREYVIQGDFMKAVRKVSDNKKLESKLDY 394
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 731 (262.4 bits), Expect = 2.5e-72, P = 2.5e-72
Identities = 155/354 (43%), Positives = 228/354 (64%)
Query: 81 EMNPE-DEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFL-----P--VVGL---VDPDKL 129
EM + D++E D ++ Q G+ VLK + + + P VVG ++ ++L
Sbjct: 52 EMTKQFDKSENDIKSLQSVGQIVGE--VLKQLSEEKFIVKATNGPRYVVGCRRSINKEEL 109
Query: 130 KPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLP 189
K G V ++ + I+ LP E D V M ++ Y+D+GGL +QI+EL E + LP
Sbjct: 110 KQGTRVSLDMTTLTIMRQLPREVDPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELP 169
Query: 190 MTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGA 249
+ + E F+++G+ PPKG LL+GPPGTGKTL+ARA A+Q + FLK+ +V +IG+ A
Sbjct: 170 LINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESA 229
Query: 250 KLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDR 309
+++R+ F A++ PCI+F+DEIDAIG +RF S DRE+QRT++ELLNQLDGF S +
Sbjct: 230 RMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDSLGK 289
Query: 310 IKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELA 369
+KVI ATNR D LDPAL+R GRLDRKIE P E++R IL+IHS K+ H +++FE +
Sbjct: 290 VKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKHGEIDFEAVV 349
Query: 370 RSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV-QAKK-KASLNY 421
+ +D F+ A L+ VC EAGM A+R + V EDF + + +V AK+ + L+Y
Sbjct: 350 KLSDGFSAADLRNVCTEAGMFAIRAEREFVIDEDFMKAVRKVGDAKRLETKLDY 403
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 731 (262.4 bits), Expect = 2.5e-72, P = 2.5e-72
Identities = 155/354 (43%), Positives = 228/354 (64%)
Query: 81 EMNPE-DEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFL-----P--VVGL---VDPDKL 129
EM + D++E D ++ Q G+ VLK + + + P VVG ++ ++L
Sbjct: 52 EMTKQFDKSENDIKSLQSVGQIVGE--VLKQLSEEKFIVKATNGPRYVVGCRRSINKEEL 109
Query: 130 KPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLP 189
K G V ++ + I+ LP E D V M ++ Y+D+GGL +QI+EL E + LP
Sbjct: 110 KQGTRVSLDMTTLTIMRQLPREVDPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELP 169
Query: 190 MTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGA 249
+ + E F+++G+ PPKG LL+GPPGTGKTL+ARA A+Q + FLK+ +V +IG+ A
Sbjct: 170 LINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESA 229
Query: 250 KLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDR 309
+++R+ F A++ PCI+F+DEIDAIG +RF S DRE+QRT++ELLNQLDGF S +
Sbjct: 230 RMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDSLGK 289
Query: 310 IKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELA 369
+KVI ATNR D LDPAL+R GRLDRKIE P E++R IL+IHS K+ H +++FE +
Sbjct: 290 VKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKHGEIDFEAVV 349
Query: 370 RSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV-QAKK-KASLNY 421
+ +D F+ A L+ VC EAGM A+R + V EDF + + +V AK+ + L+Y
Sbjct: 350 KLSDGFSAADLRNVCTEAGMFAIRAEREFVIDEDFMKAVRKVGDAKRLETKLDY 403
>FB|FBgn0036224 [details] [associations]
symbol:Rpt4R "Regulatory particle triple-A ATPase 4-related"
species:7227 "Drosophila melanogaster" [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014296
GO:GO:0006200 GO:GO:0006974 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 EMBL:AY089267 RefSeq:NP_648525.1
UniGene:Dm.5141 SMR:Q9VTQ9 IntAct:Q9VTQ9 MINT:MINT-869141
STRING:Q9VTQ9 EnsemblMetazoa:FBtr0076040 GeneID:39351
KEGG:dme:Dmel_CG7257 UCSC:CG7257-RA CTD:39351 FlyBase:FBgn0036224
InParanoid:Q9VTQ9 OMA:CAIWTEA OrthoDB:EOG4VT4CM GenomeRNAi:39351
NextBio:813228 Uniprot:Q9VTQ9
Length = 398
Score = 730 (262.0 bits), Expect = 3.2e-72, P = 3.2e-72
Identities = 160/355 (45%), Positives = 227/355 (63%)
Query: 82 MNPEDEAEEDGANIDLDS-QRKGKCV--VLKTSTRQTIFL-----P--VVGL---VDPDK 128
+N E E ED DL + Q G+ V +LK T + P VVG ++ +K
Sbjct: 45 VNAEYEKSED----DLKALQSVGQMVGEILKQLTPDNFIVKASNGPRYVVGCRRQINKEK 100
Query: 129 LKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVL 188
LKPG V ++ + I+ LP E D V M ++ +Y +IGGL +QI+EL E I L
Sbjct: 101 LKPGTRVALDVTTLTIMRYLPREVDPLVYNMTHEDPGNVNYAEIGGLGQQIRELREVIEL 160
Query: 189 PMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDG 248
P+ + + F ++G+ PPKG LLYGPPGTGKTL+ARA A+Q +A FLK+ +V +IG+
Sbjct: 161 PLLNPDIFLRVGISPPKGCLLYGPPGTGKTLLARAIASQMDANFLKVVSSAIVDKYIGES 220
Query: 249 AKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDD 308
A+L+R+ F A++ PCIIF+DEIDAIG +RF S DRE+QRT++ELLNQ+DGF +
Sbjct: 221 ARLIREMFAYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDALG 280
Query: 309 RIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEEL 368
++K+I ATNR D LDPAL+R GRLDRK+E P P E AR IL+IH+ +N ++++E +
Sbjct: 281 QVKMIMATNRPDTLDPALLRPGRLDRKLEIPLPNEVARMDILKIHAEPLNKRGEIDYEAV 340
Query: 369 ARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK--ASLNY 421
+ +D FNGA L+ +C EAG+ ALR D V EDF + + ++ KK + L+Y
Sbjct: 341 VKLSDLFNGADLRNICTEAGLFALRCDREFVIQEDFMKAVRKIADNKKLESRLDY 395
>ASPGD|ASPL0000034636 [details] [associations]
symbol:AN2917 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001306
EMBL:AACD01000051 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
OrthoDB:EOG4B01XN RefSeq:XP_660521.1 ProteinModelPortal:Q5B963
STRING:Q5B963 EnsemblFungi:CADANIAT00010170 GeneID:2874156
KEGG:ani:AN2917.2 Uniprot:Q5B963
Length = 443
Score = 723 (259.6 bits), Expect = 1.8e-71, P = 1.8e-71
Identities = 140/285 (49%), Positives = 194/285 (68%)
Query: 127 DKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAI 186
+ L D + V+++ Y I+ LP + D V M V++KP Y D+GG ++QI++L E +
Sbjct: 142 EDLSHTDRLSVDRNKYQIMLPLPPKIDPSVTMMTVEDKPDVTYGDVGGCKEQIEKLREVV 201
Query: 187 VLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIG 246
+P+ ERF LG+ PPKG LLYGPPGTGKTL ARA A +T+ATF+++ G +LVQ ++G
Sbjct: 202 EMPLLSPERFVNLGIDPPKGALLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVG 261
Query: 247 DGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSS 306
+GA++VR+ F++A+ K CIIF DEIDA+G RFD GD EVQRTMLEL+ QLDGF +
Sbjct: 262 EGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDA 321
Query: 307 DDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFE 366
IKV+ ATNR LDPALMR GR+DRKIEF P E RA IL+IH++ M+V D+ +E
Sbjct: 322 RGNIKVMFATNRPSTLDPALMRPGRIDRKIEFSLPDVEGRANILRIHAKSMSVERDIRWE 381
Query: 367 ELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV 411
++R + GA+L++V EAGM A+R +DF + +V
Sbjct: 382 LISRLCPNATGAELRSVATEAGMFAIRARRKVATEKDFLAAVDKV 426
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 718 (257.8 bits), Expect = 6.1e-71, P = 6.1e-71
Identities = 140/295 (47%), Positives = 194/295 (65%)
Query: 129 LKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVL 188
L PG V ++ + IL LP E D + M + + Y +IGGL QI+EL E + L
Sbjct: 96 LVPGARVTLDLTTLTILKILPREVDPIIFNMTAESPGSVSYGEIGGLSNQIRELREVVEL 155
Query: 189 PMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDG 248
P+ E F ++G++ PKGVLLYGPPGTGKTL+ARA A+ A FLK+ +V +IG+
Sbjct: 156 PLMIPELFIRVGIKAPKGVLLYGPPGTGKTLLARAIASNLEANFLKVVSSAIVDKYIGES 215
Query: 249 AKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDD 308
A+++R+ F A++ PC+IF+DEIDAIG +RF S DRE+QRT++ELLNQ+DGF +
Sbjct: 216 ARVIREMFGYARDHQPCVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLS 275
Query: 309 RIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEEL 368
++K+I ATNR D+LDPAL+R GRLDRKIE P P E R +L+IH+ + H DV++E +
Sbjct: 276 KVKIIMATNRPDVLDPALLRPGRLDRKIEIPLPNEAGRVDVLKIHAANITKHGDVDYEAI 335
Query: 369 ARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK--ASLNY 421
A+ D FN A L+ VC EAGM A+R + V EDF + + + Q KK L+Y
Sbjct: 336 AKLADGFNAADLRNVCTEAGMFAIRAERDYVMEEDFMKAVRKCQEAKKLEGKLDY 390
>UNIPROTKB|J9NWB0 [details] [associations]
symbol:J9NWB0 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005937 Pfam:PF00004 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074818 EMBL:AAEX03014432
Ensembl:ENSCAFT00000039483 OMA:AGSELIQ Uniprot:J9NWB0
Length = 436
Score = 709 (254.6 bits), Expect = 5.5e-70, P = 5.5e-70
Identities = 152/351 (43%), Positives = 224/351 (63%)
Query: 81 EMNP-EDEAEEDGANID-----------LDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDK 128
+M P E++ EE+ + +D L+ G V++ TS ++ ++ VD D
Sbjct: 84 QMKPLEEKQEEERSKVDDLRGTSMSVVTLEEIIDGNHVIVSTSVGSEHYVSILSFVDKDL 143
Query: 129 LKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVD--EK-PTEDYNDIGGLEKQIQELVEA 185
L+PG +N + ++ + D V M+V+ EK P E Y DI GL+ QIQE+ E+
Sbjct: 144 LEPGCSNLLNHKLHAVIVVFMDDTDPLVTVMKVEKVEKAPQETYADIRGLDNQIQEIKES 203
Query: 186 IVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFI 245
+ LP+TH E ++++G++PPKGV+LYGPPGT K A A +T+ATFL++AG +L+Q ++
Sbjct: 204 LELPLTHPENYEEMGIKPPKGVILYGPPGTVK-----AVANRTSATFLRVAGSELIQKYL 258
Query: 246 GDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFS 305
GDG K+VR++F++A+E +P I+FIDEIDAIGT+R+DS G+RE+QRTMLELLNQLDGF
Sbjct: 259 GDGPKVVRESFRVAEEHAPSIVFIDEIDAIGTRRYDSNSGGEREIQRTMLELLNQLDGFD 318
Query: 306 SDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNF 365
S +KVI ATNR LDPAL L ++ P P E+ + I QIH+ +M + DV
Sbjct: 319 SRGDVKVIMATNRIKTLDPALSHQAALTGRLS-PLPDEKTKKHIFQIHTSRMTLADDVTL 377
Query: 366 EELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 416
+ L + DD +GA +KA+C EAG++ALR +V +EDF + V KK+
Sbjct: 378 D-LIMAKDDLSGADIKAICTEAGLMALREHRMKVTNEDFKKSKENVLYKKQ 427
>CGD|CAL0001552 [details] [associations]
symbol:PR26 species:5476 "Candida albicans" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0001552 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 706 (253.6 bits), Expect = 1.1e-69, P = 1.1e-69
Identities = 134/301 (44%), Positives = 200/301 (66%)
Query: 107 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 166
++ ++T + ++ +D + LK V +++ S ++D LP E DS + + D+KP
Sbjct: 92 IVSSTTGSNYVVRILSTLDRELLKASSSVALHRHSNALVDILPPEADSSISIVGEDQKPD 151
Query: 167 EDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAA 226
Y D+GGL+ Q QE+ EA+ LP+T + + ++G+ PP+GVLLYGPPGTGKT++ +A A
Sbjct: 152 VTYADVGGLDMQKQEIKEAVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 211
Query: 227 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSG 286
T A+F+++ G + VQ ++G+G ++VRD F+LA+E SP IIFIDEIDAI TKRFD++
Sbjct: 212 STTASFIRINGSEFVQKYLGEGPRMVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTGA 271
Query: 287 DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 346
DREVQR +LELLNQ+DGF +KVI ATNRAD LDPAL+R GRLDRKIEFP +
Sbjct: 272 DREVQRILLELLNQMDGFDQTSTVKVIMATNRADTLDPALLRPGRLDRKIEFPSLKDRRE 331
Query: 347 ARIL-QIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFN 405
R++ + KM++ P+ + + L D +GA + A+ EAG+ A+R++ + D
Sbjct: 332 RRLIFSTIASKMSLAPEADLDSLIIRNDPLSGAVIAAIMQEAGLRAVRKNRYMILQSDLE 391
Query: 406 E 406
E
Sbjct: 392 E 392
>UNIPROTKB|Q5A0L8 [details] [associations]
symbol:PR26 "Likely 26S proteasome regulatory particle
ATPase Rpt3p" species:237561 "Candida albicans SC5314" [GO:0005838
"proteasome regulatory particle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0001552
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 706 (253.6 bits), Expect = 1.1e-69, P = 1.1e-69
Identities = 134/301 (44%), Positives = 200/301 (66%)
Query: 107 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 166
++ ++T + ++ +D + LK V +++ S ++D LP E DS + + D+KP
Sbjct: 92 IVSSTTGSNYVVRILSTLDRELLKASSSVALHRHSNALVDILPPEADSSISIVGEDQKPD 151
Query: 167 EDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAA 226
Y D+GGL+ Q QE+ EA+ LP+T + + ++G+ PP+GVLLYGPPGTGKT++ +A A
Sbjct: 152 VTYADVGGLDMQKQEIKEAVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 211
Query: 227 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSG 286
T A+F+++ G + VQ ++G+G ++VRD F+LA+E SP IIFIDEIDAI TKRFD++
Sbjct: 212 STTASFIRINGSEFVQKYLGEGPRMVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTGA 271
Query: 287 DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 346
DREVQR +LELLNQ+DGF +KVI ATNRAD LDPAL+R GRLDRKIEFP +
Sbjct: 272 DREVQRILLELLNQMDGFDQTSTVKVIMATNRADTLDPALLRPGRLDRKIEFPSLKDRRE 331
Query: 347 ARIL-QIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFN 405
R++ + KM++ P+ + + L D +GA + A+ EAG+ A+R++ + D
Sbjct: 332 RRLIFSTIASKMSLAPEADLDSLIIRNDPLSGAVIAAIMQEAGLRAVRKNRYMILQSDLE 391
Query: 406 E 406
E
Sbjct: 392 E 392
>POMBASE|SPCC576.10c [details] [associations]
symbol:rpt3 "19S proteasome regulatory subunit Rpt3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005524
"ATP binding" evidence=IC] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0004175 "endopeptidase activity" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC576.10c GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0016887 GO:GO:0006511
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03063 OMA:DQTTNVK PIR:T41420 RefSeq:NP_588437.1
ProteinModelPortal:O74894 SMR:O74894 STRING:O74894 PRIDE:O74894
EnsemblFungi:SPCC576.10c.1 GeneID:2539539 KEGG:spo:SPCC576.10c
OrthoDB:EOG46HKKC NextBio:20800700 Uniprot:O74894
Length = 389
Score = 706 (253.6 bits), Expect = 1.1e-69, P = 1.1e-69
Identities = 136/318 (42%), Positives = 207/318 (65%)
Query: 107 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 166
++ ++T + ++ +D + LKP V + + S ++D LP E DS + + DE+P
Sbjct: 71 IVGSTTGSNYVVRILSTLDRELLKPSASVALQRHSNALVDILPPEADSSISMLRPDERPD 130
Query: 167 EDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAA 226
Y D+GGL+ Q QE+ EA+ LP+T + ++++G+ PP+GVLLYGPPGTGKT++ +A A
Sbjct: 131 VSYADVGGLDVQKQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 190
Query: 227 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSG 286
T A F+++ G + VQ ++G+G ++VRD F++A+E +P IIFIDEIDAI TKRFD++
Sbjct: 191 STAANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENAPAIIFIDEIDAIATKRFDAQTGA 250
Query: 287 DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 346
DREVQR ++ELL Q+DGF +KVI ATNRAD LDPAL+R GRLDRKIEFP + +
Sbjct: 251 DREVQRILIELLTQMDGFDQGANVKVIMATNRADTLDPALLRPGRLDRKIEFPSYRDRRQ 310
Query: 347 ARIL-QIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFN 405
R++ Q + KM + P+V+ + D +GAQ+ A+ +AG+LA+R+ + D
Sbjct: 311 RRLVFQTITAKMLLSPEVDLDTFIMRPDASSGAQIAAIMQDAGLLAVRKSRGVILQSDIE 370
Query: 406 EGIIQVQAKKKASLNYYA 423
E +A K + +A
Sbjct: 371 EAY--ARAVKPTDMEQFA 386
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 701 (251.8 bits), Expect = 3.8e-69, P = 3.8e-69
Identities = 142/316 (44%), Positives = 201/316 (63%)
Query: 107 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAM--EVD-- 162
++K S+ + ++ KL G V ++ + ++ LP E D V M ++D
Sbjct: 68 IVKASSGPRYVVGCKSKINKSKLVIGTRVSLDMTTLTVMKRLPCEVDPLVFNMISDIDKS 127
Query: 163 EKPTE--DYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 220
E T +YN IGGL +QI+++ E + LP+ + ++++G++ PKGVLLYGPPGTGKTL+
Sbjct: 128 ENSTNKVNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLYGPPGTGKTLL 187
Query: 221 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 280
ARA A+ N F+++ +V +IG+ A+++R+ F AKE PCIIF+DEIDAIG +RF
Sbjct: 188 ARAMASNINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPCIIFMDEIDAIGGRRF 247
Query: 281 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPH 340
S DRE+QRT++ELLN LDGF +K+I ATNR D+LDPAL+R GRLDRKIE P
Sbjct: 248 SQGTSADREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRKIEIPL 307
Query: 341 PTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVN 400
P E AR IL+IH+ KM D+++E + R D FNGA L+ VC EAGM A+R V
Sbjct: 308 PNETARIEILKIHANKMTKLGDIDYESVCRLCDGFNGADLRNVCTEAGMFAIRAMRDYVI 367
Query: 401 HEDFNEGIIQVQAKKK 416
EDF + ++ KK
Sbjct: 368 EEDFYKAARKISEGKK 383
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 701 (251.8 bits), Expect = 3.8e-69, P = 3.8e-69
Identities = 142/316 (44%), Positives = 201/316 (63%)
Query: 107 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAM--EVD-- 162
++K S+ + ++ KL G V ++ + ++ LP E D V M ++D
Sbjct: 68 IVKASSGPRYVVGCKSKINKSKLVIGTRVSLDMTTLTVMKRLPCEVDPLVFNMISDIDKS 127
Query: 163 EKPTE--DYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 220
E T +YN IGGL +QI+++ E + LP+ + ++++G++ PKGVLLYGPPGTGKTL+
Sbjct: 128 ENSTNKVNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLYGPPGTGKTLL 187
Query: 221 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 280
ARA A+ N F+++ +V +IG+ A+++R+ F AKE PCIIF+DEIDAIG +RF
Sbjct: 188 ARAMASNINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPCIIFMDEIDAIGGRRF 247
Query: 281 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPH 340
S DRE+QRT++ELLN LDGF +K+I ATNR D+LDPAL+R GRLDRKIE P
Sbjct: 248 SQGTSADREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRKIEIPL 307
Query: 341 PTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVN 400
P E AR IL+IH+ KM D+++E + R D FNGA L+ VC EAGM A+R V
Sbjct: 308 PNETARIEILKIHANKMTKLGDIDYESVCRLCDGFNGADLRNVCTEAGMFAIRAMRDYVI 367
Query: 401 HEDFNEGIIQVQAKKK 416
EDF + ++ KK
Sbjct: 368 EEDFYKAARKISEGKK 383
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 687 (246.9 bits), Expect = 1.2e-67, P = 1.2e-67
Identities = 143/320 (44%), Positives = 197/320 (61%)
Query: 97 LDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRV 156
LDS+R ++K S+ + VD L G V ++ + I+ LP E D V
Sbjct: 63 LDSER----FIVKASSGPRYVVGCRNNVDQSHLVQGVRVSLDMTTLTIMRILPREVDPLV 118
Query: 157 KAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTG 216
M +++ + +GGL +QI+EL E I LP+ + E F ++G++PPKGVLLYGPPGTG
Sbjct: 119 YNMSIEDPGDISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTG 178
Query: 217 KTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIG 276
KTL+ARA AA FLK+ +V +IG+ A+++R+ F AKE PC+IF+DEIDAIG
Sbjct: 179 KTLLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIG 238
Query: 277 TKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKI 336
+RF S DRE+QRT++ELLNQ+DGF + K+I ATNR D LDPAL+R GRLDRKI
Sbjct: 239 GRRFSEGTSADREIQRTLMELLNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKI 298
Query: 337 EFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA 396
E P P E R IL+IH K++ ++++E L + TD NGA L+ V EAG +A++ D
Sbjct: 299 EIPLPNEVGRMEILKIHLEKVSKQGEIDYEALVKLTDGTNGADLRNVVTEAGFIAIKEDR 358
Query: 397 TEVNHEDFNEGIIQVQAKKK 416
V D +V KK
Sbjct: 359 DYVIQSDLMSAARKVADLKK 378
>SGD|S000002802 [details] [associations]
symbol:RPT3 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002802 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0006511 GO:GO:0017111 GO:GO:0045899 EMBL:U32274
KO:K07101 RefSeq:NP_010687.3 GeneID:852008 KEGG:sce:YDR399W
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 OrthoDB:EOG46HKKC
EMBL:X73570 EMBL:U06229 PIR:S69678 RefSeq:NP_010682.3 PDB:2DZN
PDB:2DZO PDBsum:2DZN PDBsum:2DZO ProteinModelPortal:P33298
SMR:P33298 DIP:DIP-1587N IntAct:P33298 MINT:MINT-383865
STRING:P33298 PaxDb:P33298 PeptideAtlas:P33298 EnsemblFungi:YDR394W
GeneID:852003 KEGG:sce:YDR394W EvolutionaryTrace:P33298
NextBio:970192 Genevestigator:P33298 GermOnline:YDR394W
Uniprot:P33298
Length = 428
Score = 686 (246.5 bits), Expect = 1.5e-67, P = 1.5e-67
Identities = 128/301 (42%), Positives = 199/301 (66%)
Query: 107 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 166
++ ++T + + ++ +D + LKP V +++ S ++D LP + DS + M +EKP
Sbjct: 109 IVSSTTGMSYVVRILSTLDRELLKPSMSVALHRHSNALVDILPPDSDSSISVMGENEKPD 168
Query: 167 EDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAA 226
Y D+GGL+ Q QE+ EA+ LP+ + ++++G+ PP+GVLLYGPPGTGKT++ +A A
Sbjct: 169 VTYADVGGLDMQKQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 228
Query: 227 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSG 286
T A F+++ G + V ++G+G ++VRD F+LA+E +P IIFIDE+D+I TKRFD++
Sbjct: 229 STKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAPSIIFIDEVDSIATKRFDAQTGS 288
Query: 287 DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 346
DREVQR ++ELL Q+DGF +KVI ATNRAD LDPAL+R GRLDRKIEFP +
Sbjct: 289 DREVQRILIELLTQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPSLRDRRE 348
Query: 347 ARIL-QIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFN 405
R++ + KM++ P+ + + L D +GA + A+ EAG+ A+R++ + D
Sbjct: 349 RRLIFGTIASKMSLAPEADLDSLIIRNDSLSGAVIAAIMQEAGLRAVRKNRYVILQSDLE 408
Query: 406 E 406
E
Sbjct: 409 E 409
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 684 (245.8 bits), Expect = 2.4e-67, P = 2.4e-67
Identities = 139/310 (44%), Positives = 195/310 (62%)
Query: 107 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 166
++K S+ + V VD KLK G V ++ + I+ LP E D V M E+
Sbjct: 118 IVKASSGPRYIVGVRNSVDRSKLKKGVRVTLDITTLTIMRILPRETDPLVYNMTSFEQGE 177
Query: 167 EDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAA 226
++ IGGL +QI+EL E I LP+ + E FQ++G++PPKGVLLYGPPGTGKTL+A+A AA
Sbjct: 178 ITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAA 237
Query: 227 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSG 286
A F+ +V +IG+ A+++R+ F AKE PCIIF+DE+DAIG +RF S
Sbjct: 238 TIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSA 297
Query: 287 DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 346
DRE+QRT++ELL Q+DGF + + K+I ATNR D LDPAL+R GRLDRK+E P P E R
Sbjct: 298 DREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAGR 357
Query: 347 ARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 406
I +IH+ K+ + +FE + +D FNGA ++ EAG A+R D +N +D +
Sbjct: 358 LEIFKIHTAKVKKTGEFDFEAAVKMSDGFNGADIRNCATEAGFFAIRDDRDHINPDDLMK 417
Query: 407 GIIQVQAKKK 416
+ +V KK
Sbjct: 418 AVRKVAEVKK 427
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
Identities = 143/327 (43%), Positives = 199/327 (60%)
Query: 97 LDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRV 156
LD +R ++KTS+ + + + LK G V ++ + I+ LP E D V
Sbjct: 103 LDDER----YIVKTSSGPRYIVGCRNTIKKENLKNGVRVSLDMTTLTIMRILPREVDPLV 158
Query: 157 KAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTG 216
M E +N IGGL +QI+EL E I LP+ + E F ++G++PPKGVLLYGPPGTG
Sbjct: 159 YNMTTFEPGEISFNGIGGLTEQIRELREVIELPLKNPELFTRVGIKPPKGVLLYGPPGTG 218
Query: 217 KTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIG 276
KTL+A+A AA A F+ +V +IG+ A+L+R+ F AKE PCIIF+DE+DAIG
Sbjct: 219 KTLLAKAVAATIGANFIFSPASAIVDKYIGESARLIREMFAYAKEHEPCIIFMDEVDAIG 278
Query: 277 TKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKI 336
+RF S DRE+QRT++ELLNQ+DGF + + K+I ATNR D LDPAL+R+GRLDRKI
Sbjct: 279 GRRFSEGTSADREIQRTLMELLNQMDGFDTLGQTKIIMATNRPDTLDPALLRAGRLDRKI 338
Query: 337 EFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA 396
E P E R I +IH+ K+ + +FE + +D FNGA ++ V EAG A+R D
Sbjct: 339 EIGLPNEAGRLEIFKIHTSKVAKQGEFDFEAAVKMSDGFNGADIRNVVTEAGFFAIRDDR 398
Query: 397 TEVNHEDFNEGIIQVQAKKK--ASLNY 421
+ D + + +V KK L+Y
Sbjct: 399 DYILQNDLMKAVRKVADVKKLEGKLDY 425
>UNIPROTKB|F1LZ09 [details] [associations]
symbol:F1LZ09 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR005937 Pfam:PF00004 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00780208
Ensembl:ENSRNOT00000039743 Uniprot:F1LZ09
Length = 369
Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
Identities = 128/301 (42%), Positives = 189/301 (62%)
Query: 106 VVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP 165
V++ + T + ++ +D + LKP V ++K S +++ LP E +S + + D+KP
Sbjct: 50 VIVGSITGSNCYFCILSTIDQELLKPNASVALHKHSNTLVNVLPPEAESSIMMLTSDQKP 109
Query: 166 TEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 225
Y DIG ++ Q QE+ EA+ LP+TH E ++++G+ PP+GVL+YGPPG GKT++A+ A
Sbjct: 110 NVIYADIGSMDIQKQEVWEAMELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKTVA 169
Query: 226 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVS 285
A F+ + G + V ++G+G +++ D F L KE +P IIFIDEIDAI TKRFD++
Sbjct: 170 HHMIAAFIHVVGSEFVHKYLGEGPRIIWDVFHLDKENAPAIIFIDEIDAIATKRFDAQTG 229
Query: 286 GDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEA 345
DREVQR +LELLNQ+DGF + +K I ATNR D LDP L+R G LD KIEFP P
Sbjct: 230 ADREVQRILLELLNQMDGFDQNISVKAIMATNRKDTLDPTLLRPGHLDHKIEFPLPDHRK 289
Query: 346 RARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFN 405
R I S KMN+ +VN E+ D +GA + ++C E+GML + + +DF
Sbjct: 290 RLIFSTITS-KMNLSEEVNVEDYVACPDKISGADINSICQESGMLTVCENCHIFLAKDFK 348
Query: 406 E 406
+
Sbjct: 349 K 349
>UNIPROTKB|E9PS45 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0001824 "blastocyst development"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] GO:GO:0001824 EMBL:AC090559 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00980661 ProteinModelPortal:E9PS45 SMR:E9PS45
PRIDE:E9PS45 Ensembl:ENST00000527906 ArrayExpress:E9PS45
Bgee:E9PS45 Uniprot:E9PS45
Length = 175
Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
Identities = 116/176 (65%), Positives = 143/176 (81%)
Query: 19 MTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVE 78
M+ ++I++ +RLLD+EI+++K E+ R EL + LPYLV N++E
Sbjct: 1 MSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIE 60
Query: 79 ILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVN 138
+L+++P D+ EEDGANIDLDSQRKGKC V+KTSTRQT FLPV+GLVD +KLKPGDLVGVN
Sbjct: 61 LLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVN 119
Query: 139 KDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKE 194
KDSYLIL+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQIQELVEAIVLPM HKE
Sbjct: 120 KDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKE 175
>UNIPROTKB|P37476 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0008233 "peptidase activity" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IDA] [GO:0030428 "cell septum"
evidence=IDA] [GO:0043934 "sporulation" evidence=IMP]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0006950 GO:GO:0051301 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0007049
GO:GO:0030163 EMBL:AL009126 GenomeReviews:AL009126_GR GO:GO:0043934
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0008233
GO:GO:0030428 EMBL:D26185 HOGENOM:HOG000217276 KO:K03798 PIR:E69627
RefSeq:NP_387950.1 ProteinModelPortal:P37476 SMR:P37476
IntAct:P37476 MEROPS:M41.009 EnsemblBacteria:EBBACT00000001428
GeneID:938094 KEGG:bsu:BSU00690 PATRIC:18971613 GenoList:BSU00690
OMA:ENMSYST ProtClustDB:CLSK886567 BioCyc:BSUB:BSU00690-MONOMER
Uniprot:P37476
Length = 637
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 113/265 (42%), Positives = 169/265 (63%)
Query: 154 SRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPP 213
S+ K + +EK + D+ G +++ QELVE + + +F +LG R PKGVLL GPP
Sbjct: 146 SKAK-LYTEEKKRVKFKDVAGADEEKQELVEVVEF-LKDPRKFAELGARIPKGVLLVGPP 203
Query: 214 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEID 273
GTGKTL+A+ACA + F ++G V+MF+G GA VRD F+ AK+ +PC+IFIDEID
Sbjct: 204 GTGKTLLAKACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCLIFIDEID 263
Query: 274 AIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLD 333
A+G +R G E ++T+ +LL ++DGFS+++ I +IAATNRADILDPAL+R GR D
Sbjct: 264 AVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLRPGRFD 323
Query: 334 RKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 393
R+I P R +L++H+R + VN + +A T F+GA L+ + EA ++A R
Sbjct: 324 RQITVDRPDVIGREAVLKVHARNKPLDETVNLKSIAMRTPGFSGADLENLLNEAALVAAR 383
Query: 394 RDATEVNHEDFNEG---IIQVQAKK 415
++ +++ D +E +I AKK
Sbjct: 384 QNKKKIDARDIDEATDRVIAGPAKK 408
>TIGR_CMR|DET_0391 [details] [associations]
symbol:DET_0391 "ATP-dependent metalloprotease FtsH"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:LEIIAMR MEROPS:M41.021
RefSeq:YP_181136.1 ProteinModelPortal:Q3Z9G3 SMR:Q3Z9G3
STRING:Q3Z9G3 GeneID:3230280 KEGG:det:DET0391 PATRIC:21607849
ProtClustDB:CLSK837509 BioCyc:DETH243164:GJNF-391-MONOMER
Uniprot:Q3Z9G3
Length = 608
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 115/260 (44%), Positives = 164/260 (63%)
Query: 154 SRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPP 213
S+ K +D KPT + ++ G+++ QE+ E + + +E+FQ LG R PKG+LL GPP
Sbjct: 144 SKAKLFNMD-KPTITFANVAGVDEAKQEVGEVVEF-LKSREKFQALGARIPKGILLIGPP 201
Query: 214 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEID 273
GTGKTL+A+A A + F ++G + V+MF+G GA VRD F AK+ +PCIIFIDEID
Sbjct: 202 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFDQAKKNAPCIIFIDEID 261
Query: 274 AIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLD 333
A+G +R G E ++T+ ++L ++DGF +D + VIAATNR DILDPAL+R GR D
Sbjct: 262 AVGRQRGAGLGGGHDEREQTLNQILVEMDGFDTDTSVIVIAATNRPDILDPALLRPGRFD 321
Query: 334 RKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 393
R++ P R IL+IH++ + VN E LA+ T F+GA L + EA +LA R
Sbjct: 322 RRVVLDKPDITGREAILKIHAKGKPLADTVNLENLAKQTVGFSGADLANLLNEAAILAAR 381
Query: 394 RDATEVNHEDFNEGIIQVQA 413
++ V ED E I +V A
Sbjct: 382 KNRKVVETEDLEESIDRVIA 401
>POMBASE|SPBC56F2.07c [details] [associations]
symbol:SPBC56F2.07c "ribosome biogenesis factor
recycling AAA family ATPase (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPBC56F2.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0016887 PIR:T40537
RefSeq:NP_596710.1 HSSP:Q01853 ProteinModelPortal:O60058
PRIDE:O60058 EnsemblFungi:SPBC56F2.07c.1 GeneID:2540537
KEGG:spo:SPBC56F2.07c eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
OMA:SSENMAT OrthoDB:EOG49CTH0 NextBio:20801663 GO:GO:0042273
Uniprot:O60058
Length = 809
Score = 548 (198.0 bits), Expect = 1.2e-52, P = 1.2e-52
Identities = 123/297 (41%), Positives = 178/297 (59%)
Query: 133 DLVGVNKDSYLILDTLPSEYDS-RVKAME--VDEKPTEDYNDIGGLEKQIQELVEAIVLP 189
D G++ + +D L S R AM + E P ++DIGG E+ Q+L E++ P
Sbjct: 508 DTSGLDIFGAVQMDDLEFALSSVRQSAMREFMMESPNVHWSDIGGQEEVKQKLKESVEWP 567
Query: 190 MTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGA 249
+TH E F +LGVRPPKGVLLYGPPG KT+ A+A A +T F+ + GP+L F+G+
Sbjct: 568 LTHGETFSRLGVRPPKGVLLYGPPGCSKTITAKAIATETGLNFIAVKGPELFDKFVGESE 627
Query: 250 KLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDR 309
+ VR FQ A++ SP +IF DEIDA+ R + S DR V LLN+LDG +
Sbjct: 628 RAVRQVFQKARQASPSVIFFDEIDALTANRGEDN-SSDRVVAA----LLNELDGIEALRN 682
Query: 310 IKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELA 369
+ V+AATNR D++DPALMR GRLDR + P EAR +I++I + KM DV+ + +A
Sbjct: 683 VLVLAATNRPDMIDPALMRPGRLDRLLYVGPPNFEARKQIVKIQAEKMKFAEDVDLDLIA 742
Query: 370 RSTDDFNGAQLKAVCVEAGMLALRRD--ATEVNHEDFNEGIIQVQ-AKKKASLNYYA 423
T+ +GA++ A+C EAG++A+ D A E+ F ++ ++ A + L YYA
Sbjct: 743 EKTEGCSGAEVVALCQEAGLIAMHEDLEAKEICQAHFKTALLALRKAITRDMLEYYA 799
Score = 423 (154.0 bits), Expect = 7.8e-39, P = 7.8e-39
Identities = 100/252 (39%), Positives = 148/252 (58%)
Query: 146 DTLPSEYDS-RVKAMEVDEKPTE-DYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRP 203
D S Y+ + D P+ ++ IGGL+ QI ++ + + LP + E F+ + P
Sbjct: 253 DRTQSAYNQGSEETQNFDGPPSAVTFSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMP 312
Query: 204 PKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKS 263
P+GVLLYGPPGTGKT++ RA AA+ NA + GP +V ++G+ +R F+ A+
Sbjct: 313 PRGVLLYGPPGTGKTMVMRAVAAEANAQVFTIDGPSVVGKYLGETESRLRKIFEDARAHQ 372
Query: 264 PCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILD 323
P IIFIDEIDA+ KR + +VS + E R + LL LDG ++ ++ VIAATNR + +D
Sbjct: 373 PSIIFIDEIDALAPKRTE-DVS-EAE-SRAVATLLTLLDGMANAGKVVVIAATNRPNSID 429
Query: 324 PALMRSGRLDRKIEFPHPTEEARARILQIH-SRKMNVHPDVNFEELARSTDDFNGAQLKA 382
AL R GRL+++IE P + AR I+++ S N D E+LA T + GA L A
Sbjct: 430 EALRRPGRLEKEIEIGIPDKSARLDIIKLLLSGVPNEINDAQLEDLASRTHAYVGADLAA 489
Query: 383 VCVEAGMLALRR 394
V EA + A++R
Sbjct: 490 VVREAALRAIKR 501
>UNIPROTKB|Q2GFA1 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST
MEROPS:M41.001 ProtClustDB:CLSK749654 RefSeq:YP_507882.1
ProteinModelPortal:Q2GFA1 SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708
KEGG:ech:ECH_1098 PATRIC:20577534
BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
Identities = 111/251 (44%), Positives = 160/251 (63%)
Query: 154 SRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPP 213
SR K M + + +ND+ G+++ +EL+E IV + H++RFQKLG + PKG LL G P
Sbjct: 141 SRAKLM-TENRNKVTFNDVAGIDEAKEELIE-IVDFLKHRQRFQKLGGKIPKGCLLIGSP 198
Query: 214 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEID 273
GTGKTL+ARA A + N F ++G V+MF+G GA VRD F+ K+ +PCIIFIDEID
Sbjct: 199 GTGKTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFIDEID 258
Query: 274 AIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLD 333
A+G R G+ E ++T+ +LL ++DGF S++ + +IAATNR D+LD AL+R GR D
Sbjct: 259 AVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESNEGVIIIAATNRPDVLDSALLRPGRFD 318
Query: 334 RKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 393
R++ P R +I+ +H +K+ PDVN +AR T F+GA L + EA ++A R
Sbjct: 319 RQVTISIPDINGREKIINVHIKKVPTAPDVNIRTIARGTPGFSGADLANLVNEAALIAAR 378
Query: 394 RDATEVNHEDF 404
+ V DF
Sbjct: 379 LNKKIVTMSDF 389
>UNIPROTKB|Q3AFJ8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 RefSeq:YP_359086.1
ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8 STRING:Q3AFJ8 MEROPS:M41.021
GeneID:3726212 KEGG:chy:CHY_0214 PATRIC:21273609 OMA:TGKADDE
BioCyc:CHYD246194:GJCN-215-MONOMER Uniprot:Q3AFJ8
Length = 619
Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
Identities = 118/268 (44%), Positives = 169/268 (63%)
Query: 154 SRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPP 213
SR K + DEK + D+ G+++ +EL E IV + + ++ +LG R PKGVLL+G P
Sbjct: 143 SRAK-LHTDEKKRVTFADVAGIDEVKEELAE-IVEFLKNPRKYNELGARIPKGVLLFGQP 200
Query: 214 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEID 273
GTGKTL+ARA A + F ++G V+MF+G GA VRD F+ AK+ +PCI+FIDEID
Sbjct: 201 GTGKTLLARAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEID 260
Query: 274 AIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLD 333
A+G +R G E ++T+ +LL ++DGF+S++ I +IAATNR DILDPAL+R GR D
Sbjct: 261 AVGRQRGAGLGGGHDEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRFD 320
Query: 334 RKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 393
R I P R IL++H + + DV+ + LAR T F GA L + EA +LA R
Sbjct: 321 RHIVVDTPDINGRKEILKVHVKGKPLGDDVDLDVLARRTPGFTGADLANMVNEAALLAAR 380
Query: 394 RDATEVNHEDFNEGIIQVQA--KKKASL 419
R+ +N E+ E I +V A +KK+ +
Sbjct: 381 RNKKVINMEEMEEAIERVIAGPEKKSKV 408
>TIGR_CMR|CHY_0214 [details] [associations]
symbol:CHY_0214 "cell division protein FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
RefSeq:YP_359086.1 ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8
STRING:Q3AFJ8 MEROPS:M41.021 GeneID:3726212 KEGG:chy:CHY_0214
PATRIC:21273609 OMA:TGKADDE BioCyc:CHYD246194:GJCN-215-MONOMER
Uniprot:Q3AFJ8
Length = 619
Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
Identities = 118/268 (44%), Positives = 169/268 (63%)
Query: 154 SRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPP 213
SR K + DEK + D+ G+++ +EL E IV + + ++ +LG R PKGVLL+G P
Sbjct: 143 SRAK-LHTDEKKRVTFADVAGIDEVKEELAE-IVEFLKNPRKYNELGARIPKGVLLFGQP 200
Query: 214 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEID 273
GTGKTL+ARA A + F ++G V+MF+G GA VRD F+ AK+ +PCI+FIDEID
Sbjct: 201 GTGKTLLARAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEID 260
Query: 274 AIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLD 333
A+G +R G E ++T+ +LL ++DGF+S++ I +IAATNR DILDPAL+R GR D
Sbjct: 261 AVGRQRGAGLGGGHDEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRFD 320
Query: 334 RKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 393
R I P R IL++H + + DV+ + LAR T F GA L + EA +LA R
Sbjct: 321 RHIVVDTPDINGRKEILKVHVKGKPLGDDVDLDVLARRTPGFTGADLANMVNEAALLAAR 380
Query: 394 RDATEVNHEDFNEGIIQVQA--KKKASL 419
R+ +N E+ E I +V A +KK+ +
Sbjct: 381 RNKKVINMEEMEEAIERVIAGPEKKSKV 408
>TIGR_CMR|ECH_1098 [details] [associations]
symbol:ECH_1098 "ATP-dependent metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 GO:GO:0000910
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_507882.1 ProteinModelPortal:Q2GFA1
SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708 KEGG:ech:ECH_1098
PATRIC:20577534 BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
Identities = 111/251 (44%), Positives = 160/251 (63%)
Query: 154 SRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPP 213
SR K M + + +ND+ G+++ +EL+E IV + H++RFQKLG + PKG LL G P
Sbjct: 141 SRAKLM-TENRNKVTFNDVAGIDEAKEELIE-IVDFLKHRQRFQKLGGKIPKGCLLIGSP 198
Query: 214 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEID 273
GTGKTL+ARA A + N F ++G V+MF+G GA VRD F+ K+ +PCIIFIDEID
Sbjct: 199 GTGKTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFIDEID 258
Query: 274 AIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLD 333
A+G R G+ E ++T+ +LL ++DGF S++ + +IAATNR D+LD AL+R GR D
Sbjct: 259 AVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESNEGVIIIAATNRPDVLDSALLRPGRFD 318
Query: 334 RKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 393
R++ P R +I+ +H +K+ PDVN +AR T F+GA L + EA ++A R
Sbjct: 319 RQVTISIPDINGREKIINVHIKKVPTAPDVNIRTIARGTPGFSGADLANLVNEAALIAAR 378
Query: 394 RDATEVNHEDF 404
+ V DF
Sbjct: 379 LNKKIVTMSDF 389
>WB|WBGene00010562 [details] [associations]
symbol:cdc-48.3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0007091
"metaphase/anaphase transition of mitotic cell cycle" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0007067 "mitosis" evidence=IMP] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006469 "negative regulation of protein kinase activity"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006200
"ATP catabolic process" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0007052
GO:GO:0002119 GO:GO:0006469 GO:GO:0000003 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 HOGENOM:HOG000223225 GeneTree:ENSGT00700000104502
GO:GO:0007091 EMBL:Z75712 KO:K13525 PIR:T23322 RefSeq:NP_492211.1
ProteinModelPortal:Q21222 SMR:Q21222 PaxDb:Q21222
EnsemblMetazoa:K04G2.3 GeneID:172586 KEGG:cel:CELE_K04G2.3
UCSC:K04G2.3 CTD:172586 WormBase:K04G2.3 InParanoid:Q21222
OMA:QVAPTIV NextBio:876139 Uniprot:Q21222
Length = 724
Score = 520 (188.1 bits), Expect = 2.9e-52, Sum P(2) = 2.9e-52
Identities = 108/260 (41%), Positives = 156/260 (60%)
Query: 163 EKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMAR 222
E P +NDIGG E+ E+ +A++ P H E F++ G+ PP G+LLYGPPG KTL+AR
Sbjct: 452 EVPNVSWNDIGGNEELKLEIQQAVIWPQKHPEAFERFGIDPPAGILLYGPPGCSKTLIAR 511
Query: 223 ACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDS 282
A A++ FL + GP+L ++GD K +RD F A++ +P I+F DEIDA+G+ R
Sbjct: 512 ALASEAKMNFLAVKGPELFSKWVGDSEKAIRDLFSRARQVAPTIVFFDEIDAVGSSRGSE 571
Query: 283 EVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPT 342
+ SG + R + +LL +LDG R+ ++AATNR D LD AL+R GRLDR I P
Sbjct: 572 KSSGVSD--RVLAQLLTELDGLEKSSRVILLAATNRPDQLDSALLRPGRLDRAIYVGLPC 629
Query: 343 EEARARILQIHSRKMNVHPDVN-FEELARSTDDFNGAQLKAVCVEAGMLALRR--DATEV 399
E R IL++ ++KM V ++L T ++GA+L AVC A M A+R DAT V
Sbjct: 630 EVTRRAILEMRTKKMKFDDTVRTIDKLVEKTSGYSGAELVAVCRTAAMFAMRESIDATIV 689
Query: 400 NHEDFNEGIIQVQAKKKASL 419
F + + V ++ +A L
Sbjct: 690 QWTHFEQALAAVVSRTEAYL 709
Score = 39 (18.8 bits), Expect = 2.9e-52, Sum P(2) = 2.9e-52
Identities = 25/113 (22%), Positives = 41/113 (36%)
Query: 73 VGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPG 132
VG ++IL + E + + D G C K + PV P +
Sbjct: 219 VGYKIQILNASAEGSTSDVLQTLPTDLSNIGGCFTAKQVLEDYVISPVRQKESPCSVLIW 278
Query: 133 DLVGVNK-----DSYLILDTLPSEYDSRVKAMEVDEKPTEDYN--DIGGLEKQ 178
L G K + L+L + S + ME++ T + D+ LEK+
Sbjct: 279 GLPGSGKTLLLKEVALVLSGSTTYIGSCEELMELNGVTTGNIVIVDVNELEKE 331
Score = 37 (18.1 bits), Expect = 4.8e-52, Sum P(2) = 4.8e-52
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 69 LPYLVGNIVEILEMNPED--EAEEDGANIDLDSQRKGKCV 106
L YL N+ + PE+ E++ ID D +R K V
Sbjct: 180 LKYLGQNVT----VTPEEPIESKMSAMGIDDDKKRNSKVV 215
>UNIPROTKB|Q2GIT4 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 109/251 (43%), Positives = 162/251 (64%)
Query: 154 SRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPP 213
SR + M D + ++D+ G+E+ +EL+E IV + H+++F KLG + PKG LL G P
Sbjct: 143 SRARLM-TDSRGKVTFDDVAGIEEAKEELIE-IVDFLKHRQKFTKLGGKIPKGCLLIGSP 200
Query: 214 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEID 273
GTGKTL+ARA A + N F ++G V+MF+G GA VRD F+ K+ +PCIIF+DEID
Sbjct: 201 GTGKTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEID 260
Query: 274 AIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLD 333
A+G R G+ E ++T+ +LL ++DGF S++ + +IAATNR D+LDPAL+R GR D
Sbjct: 261 AVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESNEGVVIIAATNRPDVLDPALLRPGRFD 320
Query: 334 RKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 393
R++ P R +I+ +H++K+ + PDV+ +AR T F+GA L + EA ++A R
Sbjct: 321 RQVTISIPDINGREKIIAVHAKKVPLAPDVDLRVIARGTPGFSGADLANLVNEAALIAAR 380
Query: 394 RDATEVNHEDF 404
D V DF
Sbjct: 381 LDKKIVTMCDF 391
>TIGR_CMR|APH_1179 [details] [associations]
symbol:APH_1179 "ATP-dependent metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0000910 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 109/251 (43%), Positives = 162/251 (64%)
Query: 154 SRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPP 213
SR + M D + ++D+ G+E+ +EL+E IV + H+++F KLG + PKG LL G P
Sbjct: 143 SRARLM-TDSRGKVTFDDVAGIEEAKEELIE-IVDFLKHRQKFTKLGGKIPKGCLLIGSP 200
Query: 214 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEID 273
GTGKTL+ARA A + N F ++G V+MF+G GA VRD F+ K+ +PCIIF+DEID
Sbjct: 201 GTGKTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEID 260
Query: 274 AIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLD 333
A+G R G+ E ++T+ +LL ++DGF S++ + +IAATNR D+LDPAL+R GR D
Sbjct: 261 AVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESNEGVVIIAATNRPDVLDPALLRPGRFD 320
Query: 334 RKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 393
R++ P R +I+ +H++K+ + PDV+ +AR T F+GA L + EA ++A R
Sbjct: 321 RQVTISIPDINGREKIIAVHAKKVPLAPDVDLRVIARGTPGFSGADLANLVNEAALIAAR 380
Query: 394 RDATEVNHEDF 404
D V DF
Sbjct: 381 LDKKIVTMCDF 391
>TIGR_CMR|BA_0064 [details] [associations]
symbol:BA_0064 "cell division protein FtsH" species:198094
"Bacillus anthracis str. Ames" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0051301 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0030163 HOGENOM:HOG000217277 TIGRFAMs:TIGR01241 KO:K03798
ProtClustDB:CLSK886567 HSSP:Q9LCZ4 OMA:QINMEEV RefSeq:NP_842633.1
RefSeq:YP_016667.1 RefSeq:YP_026351.1 ProteinModelPortal:Q81VX5
SMR:Q81VX5 IntAct:Q81VX5 DNASU:1086600
EnsemblBacteria:EBBACT00000009752 EnsemblBacteria:EBBACT00000016661
EnsemblBacteria:EBBACT00000022411 GeneID:1086600 GeneID:2819677
GeneID:2851579 KEGG:ban:BA_0064 KEGG:bar:GBAA_0064 KEGG:bat:BAS0064
BioCyc:BANT260799:GJAJ-73-MONOMER BioCyc:BANT261594:GJ7F-75-MONOMER
Uniprot:Q81VX5
Length = 633
Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 110/257 (42%), Positives = 162/257 (63%)
Query: 162 DEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMA 221
DEK + D+ G +++ QELVE + + +F ++G R PKGVLL GPPGTGKTL+A
Sbjct: 154 DEKKKVRFRDVAGADEEKQELVEVVEF-LKDPRKFAEVGARIPKGVLLVGPPGTGKTLLA 212
Query: 222 RACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFD 281
RA A + F ++G V+MF+G GA VRD F+ AK+ +PCIIFIDEIDA+G +R
Sbjct: 213 RAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGA 272
Query: 282 SEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHP 341
G E ++T+ +LL ++DGF +++ I +IAATNR DILDPAL+R GR DR+I P
Sbjct: 273 GLGGGHDEREQTLNQLLVEMDGFGANEGIIIIAATNRPDILDPALLRPGRFDRQITVDRP 332
Query: 342 TEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNH 401
R +L++H+R + ++N +A T F+GA L+ + EA ++A R+D +++
Sbjct: 333 DVNGREAVLKVHARNKPLDENINLRAIATRTPGFSGADLENLLNEAALVAARQDKKKIDM 392
Query: 402 EDFNEG---IIQVQAKK 415
D +E +I AKK
Sbjct: 393 SDIDEATDRVIAGPAKK 409
>TIGR_CMR|GSU_1809 [details] [associations]
symbol:GSU_1809 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952859.2 GeneID:2688702 KEGG:gsu:GSU1809 PATRIC:22026473
ProtClustDB:CLSK828573 BioCyc:GSUL243231:GH27-1860-MONOMER
Uniprot:Q74C66
Length = 610
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 113/254 (44%), Positives = 163/254 (64%)
Query: 154 SRVKAM-EVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGP 212
SR K + E + T + D+ G+++ +EL E I+ + ++F KLG R PKGVLL GP
Sbjct: 138 SRAKLLTEAQGRVT--FEDVAGVDEAKEEL-EEIIQFLKDPKKFTKLGGRIPKGVLLVGP 194
Query: 213 PGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEI 272
PGTGKTL+ARA A + F ++G V+MF+G GA VRD F K+ +PCIIFIDEI
Sbjct: 195 PGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFVQGKKNAPCIIFIDEI 254
Query: 273 DAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRL 332
DA+G R G E ++T+ +LL ++DGF S++ + +IAATNR D+LDPAL+R GR
Sbjct: 255 DAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFESNEGVILIAATNRPDVLDPALLRPGRF 314
Query: 333 DRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLAL 392
DR++ P P + R IL++H++K + DV+ +AR T F+GA L V EA +LA
Sbjct: 315 DRQVVVPQPDVKGREMILKVHTKKTPLASDVDLGVIARGTPGFSGADLSNVVNEAALLAA 374
Query: 393 RRDATEVNHEDFNE 406
R+D + V +DF++
Sbjct: 375 RKDKSFVEMKDFDD 388
>GENEDB_PFALCIPARUM|PFF0940c [details] [associations]
symbol:PFF0940c "cell division cycle protein 48
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 536 (193.7 bits), Expect = 3.6e-51, P = 3.6e-51
Identities = 115/276 (41%), Positives = 169/276 (61%)
Query: 128 KLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIV 187
++ P D V+ D+ + + P + D K E+ Y+DIGG +KQ+ ++ E I
Sbjct: 171 EVDPDDFCIVSPDTVIYYEGDPIKRDDEEKLDEIG------YDDIGGCKKQLAQIREMIE 224
Query: 188 LPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGD 247
LP+ H F+ LGV+PP+GVLLYGPPG+GKT +ARA A +T A F + GP+++ G+
Sbjct: 225 LPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAVANETGAFFFLINGPEVMSKMAGE 284
Query: 248 GAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSD 307
+R AF+ A++ SP IIFIDEID+I KR + +G+ E +R + +LL +DG S
Sbjct: 285 AEANLRRAFEEAEKNSPAIIFIDEIDSIAPKR--EKTNGEVE-RRVVSQLLTLMDGIKSR 341
Query: 308 DRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEE 367
++ VIAATNR + +DPAL R GR DR+I+ P + R IL+IH++ M + PDV EE
Sbjct: 342 GQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNGRFEILRIHTKNMKLSPDVKLEE 401
Query: 368 LARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 403
LA +T F GA L +C EA + +R ++ ED
Sbjct: 402 LASNTHGFVGADLAQLCTEAALTCIREKMDVIDLED 437
Score = 478 (173.3 bits), Expect = 8.9e-45, P = 8.9e-45
Identities = 104/261 (39%), Positives = 156/261 (59%)
Query: 161 VDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 220
V E P ++DIGGL++ L E I+ P+ H ++F+K G+ P +GVL YGPPG GKTL+
Sbjct: 471 VVEVPNVKWDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLL 530
Query: 221 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 280
A+A A++ +A F+ + GP+L+ M+ G+ VR+ F A+ +PC++F DE+D+IGT+R
Sbjct: 531 AKAVASECSANFVSIKGPELLTMWFGESEANVREVFDKARAAAPCVLFFDELDSIGTQRG 590
Query: 281 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPH 340
S G R M +LL ++DG + I ATNR ++LD AL+R GRLD+ I P
Sbjct: 591 SSLGDGSGAGDRVMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGRLDQLIYIPL 650
Query: 341 PTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVN 400
P AR IL RK V +V + LA+ T F+GA L +C A A+R DA ++
Sbjct: 651 PDLGARISILTAILRKCPVAENVPIDFLAQKTAGFSGADLAELCQRAARAAIR-DA--ID 707
Query: 401 HEDFNE-GIIQVQAKKKASLN 420
E+ N+ +++ KK+ N
Sbjct: 708 AEEMNKKSKLELSNKKENEQN 728
>UNIPROTKB|C6KT34 [details] [associations]
symbol:PFF0940c "Cell division cycle protein 48 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 536 (193.7 bits), Expect = 3.6e-51, P = 3.6e-51
Identities = 115/276 (41%), Positives = 169/276 (61%)
Query: 128 KLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIV 187
++ P D V+ D+ + + P + D K E+ Y+DIGG +KQ+ ++ E I
Sbjct: 171 EVDPDDFCIVSPDTVIYYEGDPIKRDDEEKLDEIG------YDDIGGCKKQLAQIREMIE 224
Query: 188 LPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGD 247
LP+ H F+ LGV+PP+GVLLYGPPG+GKT +ARA A +T A F + GP+++ G+
Sbjct: 225 LPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAVANETGAFFFLINGPEVMSKMAGE 284
Query: 248 GAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSD 307
+R AF+ A++ SP IIFIDEID+I KR + +G+ E +R + +LL +DG S
Sbjct: 285 AEANLRRAFEEAEKNSPAIIFIDEIDSIAPKR--EKTNGEVE-RRVVSQLLTLMDGIKSR 341
Query: 308 DRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEE 367
++ VIAATNR + +DPAL R GR DR+I+ P + R IL+IH++ M + PDV EE
Sbjct: 342 GQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNGRFEILRIHTKNMKLSPDVKLEE 401
Query: 368 LARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 403
LA +T F GA L +C EA + +R ++ ED
Sbjct: 402 LASNTHGFVGADLAQLCTEAALTCIREKMDVIDLED 437
Score = 478 (173.3 bits), Expect = 8.9e-45, P = 8.9e-45
Identities = 104/261 (39%), Positives = 156/261 (59%)
Query: 161 VDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 220
V E P ++DIGGL++ L E I+ P+ H ++F+K G+ P +GVL YGPPG GKTL+
Sbjct: 471 VVEVPNVKWDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLL 530
Query: 221 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 280
A+A A++ +A F+ + GP+L+ M+ G+ VR+ F A+ +PC++F DE+D+IGT+R
Sbjct: 531 AKAVASECSANFVSIKGPELLTMWFGESEANVREVFDKARAAAPCVLFFDELDSIGTQRG 590
Query: 281 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPH 340
S G R M +LL ++DG + I ATNR ++LD AL+R GRLD+ I P
Sbjct: 591 SSLGDGSGAGDRVMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGRLDQLIYIPL 650
Query: 341 PTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVN 400
P AR IL RK V +V + LA+ T F+GA L +C A A+R DA ++
Sbjct: 651 PDLGARISILTAILRKCPVAENVPIDFLAQKTAGFSGADLAELCQRAARAAIR-DA--ID 707
Query: 401 HEDFNE-GIIQVQAKKKASLN 420
E+ N+ +++ KK+ N
Sbjct: 708 AEEMNKKSKLELSNKKENEQN 728
>TAIR|locus:2011952 [details] [associations]
symbol:FTSH1 "FTSH protease 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0031977
"thylakoid lumen" evidence=IDA] [GO:0010206 "photosystem II repair"
evidence=TAS] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0007275
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 eggNOG:COG0465
TIGRFAMs:TIGR01241 GO:GO:0009535 GO:GO:0031977 GO:GO:0004176
GO:GO:0010206 EMBL:AC007980 EMBL:X99808 EMBL:AY091095 EMBL:AY123034
EMBL:Y12780 IPI:IPI00518805 PIR:G96538 RefSeq:NP_564563.1
UniGene:At.21777 ProteinModelPortal:Q39102 SMR:Q39102 STRING:Q39102
MEROPS:M41.020 PaxDb:Q39102 PRIDE:Q39102 EnsemblPlants:AT1G50250.1
GeneID:841447 KEGG:ath:AT1G50250 GeneFarm:2667 TAIR:At1g50250
HOGENOM:HOG000217276 InParanoid:Q39102 KO:K03798 OMA:GGNPAMN
PhylomeDB:Q39102 ProtClustDB:CLSN2688633 Genevestigator:Q39102
GermOnline:AT1G50250 GO:GO:0010304 Uniprot:Q39102
Length = 716
Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
Identities = 111/273 (40%), Positives = 170/273 (62%)
Query: 149 PSEYD-SRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGV 207
P ++ S+ K EV E + D+ G ++ EL E + + + +++ LG + PKG
Sbjct: 241 PMDFGRSKSKFQEVPETGVS-FADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGC 298
Query: 208 LLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCII 267
LL GPPGTGKTL+ARA A + F A + V++F+G GA VRD F+ AK K+PCI+
Sbjct: 299 LLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIV 358
Query: 268 FIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALM 327
FIDEIDA+G +R G+ E ++T+ +LL ++DGFS + + V+AATNR D+LD AL+
Sbjct: 359 FIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALL 418
Query: 328 RSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEA 387
R GR DR++ P R +ILQ+HSR + DV+F+++AR T F GA L+ + EA
Sbjct: 419 RPGRFDRQVTVDRPDVAGRVKILQVHSRGKALGKDVDFDKVARRTPGFTGADLQNLMNEA 478
Query: 388 GMLALRRDATEVNHEDFNEGIIQVQA---KKKA 417
+LA RR+ E++ ++ ++ + ++ A KK A
Sbjct: 479 AILAARRELKEISKDEISDALERIIAGPEKKNA 511
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 520 (188.1 bits), Expect = 4.8e-51, Sum P(2) = 4.8e-51
Identities = 116/312 (37%), Positives = 183/312 (58%)
Query: 101 RKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAM- 159
RKG ++ RQ F V VDP+ ++ V +D+ + + P + ++
Sbjct: 158 RKGDLFTVRGGMRQVEFKVVE--VDPE-----EIAIVAQDTIIHCEGEPINREDEENSLN 210
Query: 160 EVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTL 219
EV Y+DIGG +KQ+ ++ E + LP+ H + F+ +G++PPKG+L+YGPPGTGKT+
Sbjct: 211 EVG------YDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTI 264
Query: 220 MARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKR 279
MARA A +T A F + GP+++ G+ +R AF+ A++ SP IIFIDEID+I KR
Sbjct: 265 MARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKR 324
Query: 280 FDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFP 339
+ +G+ E +R + +LL +DG + + VIAATNR + +DPAL R GR DR+++
Sbjct: 325 --DKTNGEVE-RRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIG 381
Query: 340 HPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR--DAT 397
P E R IL+IH++ M + DV+ E +A T F GA + ++C EA M +R D
Sbjct: 382 VPDAEGRLEILRIHTKNMKLADDVDLEAIASETHGFVGADIASLCSEAAMQQIREKMDLI 441
Query: 398 EVNHEDFNEGII 409
++ E + ++
Sbjct: 442 DLEEETIDTEVL 453
Score = 471 (170.9 bits), Expect = 1.6e-45, Sum P(2) = 1.6e-45
Identities = 98/264 (37%), Positives = 154/264 (58%)
Query: 135 VGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKE 194
+GV +D++ L + S ++ V E ++DIGGL+ EL E + P+ H +
Sbjct: 456 LGVTQDNFRF--ALGNSNPSALRETVV-ENVNVTWDDIGGLDNIKNELKETVEYPVLHPD 512
Query: 195 RFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRD 254
++QK G+ P KGVL +GPPGTGKTL+A+A A + +A F+ + GP+L+ M+ G+ +RD
Sbjct: 513 QYQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRD 572
Query: 255 AFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIA 314
F A+ +P ++F+DE+D+I R S R + +LL ++DG ++ + VI
Sbjct: 573 IFDKARAAAPTVVFLDELDSIAKARGGSHGDAGGASDRVVNQLLTEMDGMNAKKNVFVIG 632
Query: 315 ATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDD 374
ATNR D +DPAL+R GRLD+ I P P E AR ILQ R + P ++ E+A+ T
Sbjct: 633 ATNRPDQIDPALLRPGRLDQLIYVPLPDEPARLSILQAQLRNTPLEPGLDLNEIAKITHG 692
Query: 375 FNGAQLKAVCVEAGMLALRRDATE 398
F+GA L + + A++ D+ E
Sbjct: 693 FSGADLSYIVQRSAKFAIK-DSIE 715
Score = 38 (18.4 bits), Expect = 4.8e-51, Sum P(2) = 4.8e-51
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 3 TAMVEDPNLEDDQLSSMTADD----IVRASRLLDNEIRV 37
T +V+ +D L + DD + R +R + N +RV
Sbjct: 67 TVLVKGKKRKDTVLIVLADDDMPDGVARVNRCVRNNLRV 105
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 520 (188.1 bits), Expect = 4.8e-51, Sum P(2) = 4.8e-51
Identities = 116/312 (37%), Positives = 183/312 (58%)
Query: 101 RKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAM- 159
RKG ++ RQ F V VDP+ ++ V +D+ + + P + ++
Sbjct: 158 RKGDLFTVRGGMRQVEFKVVE--VDPE-----EIAIVAQDTIIHCEGEPINREDEENSLN 210
Query: 160 EVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTL 219
EV Y+DIGG +KQ+ ++ E + LP+ H + F+ +G++PPKG+L+YGPPGTGKT+
Sbjct: 211 EVG------YDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTI 264
Query: 220 MARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKR 279
MARA A +T A F + GP+++ G+ +R AF+ A++ SP IIFIDEID+I KR
Sbjct: 265 MARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKR 324
Query: 280 FDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFP 339
+ +G+ E +R + +LL +DG + + VIAATNR + +DPAL R GR DR+++
Sbjct: 325 --DKTNGEVE-RRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIG 381
Query: 340 HPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR--DAT 397
P E R IL+IH++ M + DV+ E +A T F GA + ++C EA M +R D
Sbjct: 382 VPDAEGRLEILRIHTKNMKLADDVDLEAIASETHGFVGADIASLCSEAAMQQIREKMDLI 441
Query: 398 EVNHEDFNEGII 409
++ E + ++
Sbjct: 442 DLEEETIDTEVL 453
Score = 471 (170.9 bits), Expect = 1.6e-45, Sum P(2) = 1.6e-45
Identities = 98/264 (37%), Positives = 154/264 (58%)
Query: 135 VGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKE 194
+GV +D++ L + S ++ V E ++DIGGL+ EL E + P+ H +
Sbjct: 456 LGVTQDNFRF--ALGNSNPSALRETVV-ENVNVTWDDIGGLDNIKNELKETVEYPVLHPD 512
Query: 195 RFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRD 254
++QK G+ P KGVL +GPPGTGKTL+A+A A + +A F+ + GP+L+ M+ G+ +RD
Sbjct: 513 QYQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRD 572
Query: 255 AFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIA 314
F A+ +P ++F+DE+D+I R S R + +LL ++DG ++ + VI
Sbjct: 573 IFDKARAAAPTVVFLDELDSIAKARGGSHGDAGGASDRVVNQLLTEMDGMNAKKNVFVIG 632
Query: 315 ATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDD 374
ATNR D +DPAL+R GRLD+ I P P E AR ILQ R + P ++ E+A+ T
Sbjct: 633 ATNRPDQIDPALLRPGRLDQLIYVPLPDEPARLSILQAQLRNTPLEPGLDLNEIAKITHG 692
Query: 375 FNGAQLKAVCVEAGMLALRRDATE 398
F+GA L + + A++ D+ E
Sbjct: 693 FSGADLSYIVQRSAKFAIK-DSIE 715
Score = 38 (18.4 bits), Expect = 4.8e-51, Sum P(2) = 4.8e-51
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 3 TAMVEDPNLEDDQLSSMTADD----IVRASRLLDNEIRV 37
T +V+ +D L + DD + R +R + N +RV
Sbjct: 67 TVLVKGKKRKDTVLIVLADDDMPDGVARVNRCVRNNLRV 105
>TAIR|locus:2157637 [details] [associations]
symbol:VAR1 "VARIEGATED 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA;IDA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=RCA;TAS] [GO:0009579 "thylakoid" evidence=IDA] [GO:0010205
"photoinhibition" evidence=IMP] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
[GO:0009773 "photosynthetic electron transport in photosystem I"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0007275 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0006508 GO:GO:0009941
GO:GO:0004222 GO:GO:0016887 EMBL:AB023032 GO:GO:0010205
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0009535
HOGENOM:HOG000217276 KO:K03798 ProtClustDB:CLSN2688633
GO:GO:0010304 EMBL:AY126987 IPI:IPI00517420 RefSeq:NP_568604.1
UniGene:At.21670 UniGene:At.66720 ProteinModelPortal:Q9FH02
SMR:Q9FH02 STRING:Q9FH02 MEROPS:M41.024 PaxDb:Q9FH02 PRIDE:Q9FH02
EnsemblPlants:AT5G42270.1 GeneID:834232 KEGG:ath:AT5G42270
GeneFarm:4746 TAIR:At5g42270 InParanoid:Q9FH02 OMA:RARASMP
PhylomeDB:Q9FH02 Genevestigator:Q9FH02 GermOnline:AT5G42270
Uniprot:Q9FH02
Length = 704
Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
Identities = 110/273 (40%), Positives = 170/273 (62%)
Query: 149 PSEYD-SRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGV 207
P ++ S+ K EV E + D+ G ++ EL E + + + +++ LG + PKG
Sbjct: 229 PMDFGRSKSKFQEVPETGVT-FGDVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGC 286
Query: 208 LLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCII 267
LL GPPGTGKTL+ARA A + F A + V++F+G GA VRD F+ AK K+PCI+
Sbjct: 287 LLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIV 346
Query: 268 FIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALM 327
FIDEIDA+G +R G+ E ++T+ +LL ++DGFS + + V+AATNR D+LD AL+
Sbjct: 347 FIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALL 406
Query: 328 RSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEA 387
R GR DR++ P R +IL++HSR + DV++E++AR T F GA L+ + EA
Sbjct: 407 RPGRFDRQVTVDRPDVAGRVQILKVHSRGKAIGKDVDYEKVARRTPGFTGADLQNLMNEA 466
Query: 388 GMLALRRDATEVNHEDFNEGIIQVQA---KKKA 417
+LA RR+ E++ ++ ++ + ++ A KK A
Sbjct: 467 AILAARRELKEISKDEISDALERIIAGPEKKNA 499
>UNIPROTKB|Q55700 [details] [associations]
symbol:ftsH2 "ATP-dependent zinc metalloprotease FtsH 2"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0010206 "photosystem II repair" evidence=IMP] [GO:0042651
"thylakoid membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009523 "photosystem II" evidence=IDA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0042651 GO:GO:0010206
HOGENOM:HOG000217276 KO:K03798 PIR:S76378 RefSeq:NP_442160.1
RefSeq:YP_005652219.1 ProteinModelPortal:Q55700 SMR:Q55700
IntAct:Q55700 STRING:Q55700 MEROPS:M41.017 GeneID:12253438
GeneID:952628 KEGG:syn:slr0228 KEGG:syy:SYNGTS_2266 PATRIC:23841938
OMA:NTASTRM Uniprot:Q55700
Length = 627
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 104/254 (40%), Positives = 160/254 (62%)
Query: 160 EVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTL 219
++D K ++D+ G+++ +EL E + + ERF +G + PKGVLL GPPGTGKTL
Sbjct: 162 QMDAKTGVMFDDVAGIDEAKEELQEVVTF-LKQPERFTAVGAKIPKGVLLVGPPGTGKTL 220
Query: 220 MARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKR 279
+A+A A + F ++G + V+MF+G GA VRD F+ AKE +PC+IFIDEIDA+G +R
Sbjct: 221 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDAVGRQR 280
Query: 280 FDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFP 339
G+ E ++T+ +LL ++DGF + I +IAATNR D+LD ALMR GR DR++
Sbjct: 281 GAGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDRQVMVD 340
Query: 340 HPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEV 399
P R IL++H+R + P+V+ + +AR T F+GA L + EA +L RR + +
Sbjct: 341 APDYSGRKEILEVHARNKKLAPEVSIDSIARRTPGFSGADLANLLNEAAILTARRRKSAI 400
Query: 400 NHEDFNEGIIQVQA 413
+ ++ + +V A
Sbjct: 401 TLLEIDDAVDRVVA 414
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 512 (185.3 bits), Expect = 2.2e-50, Sum P(2) = 2.2e-50
Identities = 109/273 (39%), Positives = 166/273 (60%)
Query: 134 LVGVNKDSYLIL--DTLPSEYDSRVKAMEVDEKPTE-DYNDIGGLEKQIQELVEAIVLPM 190
+V + Y I+ DT+ +K + +E E Y+DIGG+ KQ+ ++ E + LP+
Sbjct: 165 VVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPL 224
Query: 191 THKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAK 250
H F+ +GV+PP+G+LLYGPPGTGKTL+ARA A +T A F + GP+++ G+
Sbjct: 225 RHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES 284
Query: 251 LVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRI 310
+R AF+ A++ +P IIFIDE+DAI KR + G+ E +R + +LL +DG +
Sbjct: 285 NLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHV 341
Query: 311 KVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELAR 370
V+AATNR + +DPAL R GR DR+++ P R ILQIH++ M + DV+ E++A
Sbjct: 342 IVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVAN 401
Query: 371 STDDFNGAQLKAVCVEAGMLALRRDATEVNHED 403
T GA L A+C EA + A+R+ ++ ED
Sbjct: 402 ETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Score = 502 (181.8 bits), Expect = 3.2e-49, Sum P(2) = 3.2e-49
Identities = 99/243 (40%), Positives = 149/243 (61%)
Query: 161 VDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 220
V E P + DIGGL+ +EL E + P+ H ++F K G+ P KGVL YGPPG GKTL+
Sbjct: 468 VVEVPNITWEDIGGLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 221 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 280
A+A A + A F+ + GP+L+ M+ G+ VR+ F A++ +PC++F DE+D+I R
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 281 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPH 340
+ G R + ++L ++DG SS + +I ATNR DI+DPA++R GRLD+ I P
Sbjct: 588 GNVGDGGGAADRVINQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 341 PTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA-TEV 399
P E++R IL+ + RK + DV+ + LA+ T+ F+GA L +C A LA+R E+
Sbjct: 648 PDEKSRIAILKANLRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEI 707
Query: 400 NHE 402
E
Sbjct: 708 RRE 710
Score = 39 (18.8 bits), Expect = 2.2e-50, Sum P(2) = 2.2e-50
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 11 LEDDQLSSMTADDIVRASRLLDNEIRV 37
L DD S D+ VR +R++ N +RV
Sbjct: 72 LSDDTCS----DEKVRMNRVVRNNLRV 94
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 512 (185.3 bits), Expect = 2.8e-50, Sum P(2) = 2.8e-50
Identities = 109/273 (39%), Positives = 165/273 (60%)
Query: 134 LVGVNKDSYLIL--DTLPSEYDSRVKAMEVDEKPTE-DYNDIGGLEKQIQELVEAIVLPM 190
+V + Y I+ DT+ +K + +E E Y+DIGG KQ+ ++ E + LP+
Sbjct: 165 VVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPL 224
Query: 191 THKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAK 250
H F+ +GV+PP+G+LLYGPPGTGKTL+ARA A +T A F + GP+++ G+
Sbjct: 225 RHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES 284
Query: 251 LVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRI 310
+R AF+ A++ +P IIFIDE+DAI KR + G+ E +R + +LL +DG +
Sbjct: 285 NLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHV 341
Query: 311 KVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELAR 370
V+AATNR + +DPAL R GR DR+++ P R ILQIH++ M + DV+ E++A
Sbjct: 342 IVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVAN 401
Query: 371 STDDFNGAQLKAVCVEAGMLALRRDATEVNHED 403
T GA L A+C EA + A+R+ ++ ED
Sbjct: 402 ETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Score = 501 (181.4 bits), Expect = 5.1e-49, Sum P(2) = 5.1e-49
Identities = 100/243 (41%), Positives = 149/243 (61%)
Query: 161 VDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 220
V E P + DIGGLE +EL E + P+ H ++F K G+ P KGVL YGPPG GKTL+
Sbjct: 468 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 221 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 280
A+A A + A F+ + GP+L+ M+ G+ VR+ F A++ +PC++F DE+D+I R
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 281 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPH 340
+ G R + ++L ++DG S+ + +I ATNR DI+DPA++R GRLD+ I P
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 341 PTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA-TEV 399
P E++R IL+ + RK V DV+ + LA+ T+ F+GA L +C A LA+R E+
Sbjct: 648 PDEKSRIAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEI 707
Query: 400 NHE 402
E
Sbjct: 708 RRE 710
Score = 38 (18.4 bits), Expect = 2.8e-50, Sum P(2) = 2.8e-50
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 11 LEDDQLSSMTADDIVRASRLLDNEIRV 37
L DD S D+ +R +R++ N +RV
Sbjct: 72 LSDDTCS----DEKIRMNRVVRNNLRV 94
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 512 (185.3 bits), Expect = 2.8e-50, Sum P(2) = 2.8e-50
Identities = 109/273 (39%), Positives = 165/273 (60%)
Query: 134 LVGVNKDSYLIL--DTLPSEYDSRVKAMEVDEKPTE-DYNDIGGLEKQIQELVEAIVLPM 190
+V + Y I+ DT+ +K + +E E Y+DIGG KQ+ ++ E + LP+
Sbjct: 165 VVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPL 224
Query: 191 THKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAK 250
H F+ +GV+PP+G+LLYGPPGTGKTL+ARA A +T A F + GP+++ G+
Sbjct: 225 RHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES 284
Query: 251 LVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRI 310
+R AF+ A++ +P IIFIDE+DAI KR + G+ E +R + +LL +DG +
Sbjct: 285 NLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHV 341
Query: 311 KVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELAR 370
V+AATNR + +DPAL R GR DR+++ P R ILQIH++ M + DV+ E++A
Sbjct: 342 IVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVAN 401
Query: 371 STDDFNGAQLKAVCVEAGMLALRRDATEVNHED 403
T GA L A+C EA + A+R+ ++ ED
Sbjct: 402 ETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Score = 497 (180.0 bits), Expect = 1.5e-48, Sum P(2) = 1.5e-48
Identities = 100/243 (41%), Positives = 148/243 (60%)
Query: 161 VDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 220
V E P + DIGGLE +EL E + P+ H ++F K G+ P KGVL YGPPG GKTL+
Sbjct: 468 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 221 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 280
A+A A + A F+ + GP+L+ M+ G+ VR+ F A++ +PC++F DE+D+I R
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 281 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPH 340
+ G R + ++L ++DG S + +I ATNR DI+DPA++R GRLD+ I P
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 341 PTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA-TEV 399
P E++R IL+ + RK V DV+ + LA+ T+ F+GA L +C A LA+R E+
Sbjct: 648 PDEKSRMAILKANLRKSPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRESIENEI 707
Query: 400 NHE 402
E
Sbjct: 708 RRE 710
Score = 38 (18.4 bits), Expect = 2.8e-50, Sum P(2) = 2.8e-50
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 11 LEDDQLSSMTADDIVRASRLLDNEIRV 37
L DD S D+ +R +R++ N +RV
Sbjct: 72 LSDDTCS----DEKIRMNRVVRNNLRV 94
>UNIPROTKB|Q5LNU8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
Identities = 107/249 (42%), Positives = 160/249 (64%)
Query: 157 KAMEVDEKPTE-DYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGT 215
KA + EK ++D+ G+++ +EL E IV + + ++F +LG + PKG LL GPPGT
Sbjct: 142 KAKMLTEKHGRVTFDDVAGIDEAKEEL-EEIVEFLRNPQKFSRLGGKIPKGALLVGPPGT 200
Query: 216 GKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAI 275
GKTL+ARA A + F ++G V+MF+G GA VRD F+ AK+ +PCI+FIDEIDA+
Sbjct: 201 GKTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAV 260
Query: 276 GTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRK 335
G R G+ E ++T+ +LL ++DGF +++ + ++AATNR D+LDPAL+R GR DR
Sbjct: 261 GRHRGAGYGGGNDEREQTLNQLLVEMDGFEANEGVIILAATNRKDVLDPALLRPGRFDRN 320
Query: 336 IEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD 395
+ +P + R +IL +H+RK + PDV+ +AR T F+GA L + EA ++A R
Sbjct: 321 VTVGNPDIKGREKILGVHARKTPLGPDVDLRIIARGTPGFSGADLANLVNEAALMAARVG 380
Query: 396 ATEVNHEDF 404
V EDF
Sbjct: 381 RRFVTMEDF 389
>TIGR_CMR|SPO_3105 [details] [associations]
symbol:SPO_3105 "ATP-dependent metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
Identities = 107/249 (42%), Positives = 160/249 (64%)
Query: 157 KAMEVDEKPTE-DYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGT 215
KA + EK ++D+ G+++ +EL E IV + + ++F +LG + PKG LL GPPGT
Sbjct: 142 KAKMLTEKHGRVTFDDVAGIDEAKEEL-EEIVEFLRNPQKFSRLGGKIPKGALLVGPPGT 200
Query: 216 GKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAI 275
GKTL+ARA A + F ++G V+MF+G GA VRD F+ AK+ +PCI+FIDEIDA+
Sbjct: 201 GKTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAV 260
Query: 276 GTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRK 335
G R G+ E ++T+ +LL ++DGF +++ + ++AATNR D+LDPAL+R GR DR
Sbjct: 261 GRHRGAGYGGGNDEREQTLNQLLVEMDGFEANEGVIILAATNRKDVLDPALLRPGRFDRN 320
Query: 336 IEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD 395
+ +P + R +IL +H+RK + PDV+ +AR T F+GA L + EA ++A R
Sbjct: 321 VTVGNPDIKGREKILGVHARKTPLGPDVDLRIIARGTPGFSGADLANLVNEAALMAARVG 380
Query: 396 ATEVNHEDF 404
V EDF
Sbjct: 381 RRFVTMEDF 389
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 512 (185.3 bits), Expect = 4.2e-50, Sum P(2) = 4.2e-50
Identities = 116/312 (37%), Positives = 186/312 (59%)
Query: 101 RKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLP-SEYDSRVKAM 159
RKG V++ S RQ F VV V PD+ G V++D+ + + P + D
Sbjct: 167 RKGDLFVVRGSMRQVEF-KVVD-VAPDEF--GI---VSQDTIIHWEGEPINREDEESSLA 219
Query: 160 EVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTL 219
EV Y+DIGG +Q+ ++ E + LP+ H + F+ +G++PP+G+L+YGPPGTGKTL
Sbjct: 220 EVG------YDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTL 273
Query: 220 MARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKR 279
MARA A +T A F + GP+++ G+ +R AF+ A++ SP IIFIDEID+I KR
Sbjct: 274 MARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKR 333
Query: 280 FDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFP 339
+ +G+ E +R + +LL +DG + + V+AATNR + +DPAL R GR DR+++
Sbjct: 334 --EKTNGEVE-RRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVG 390
Query: 340 HPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR--DAT 397
P R IL+IH++ M + DV+ E++A T + G+ L ++C EA M +R D
Sbjct: 391 IPDPTGRLEILRIHTKNMKLADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKMDMI 450
Query: 398 EVNHEDFNEGII 409
+++ ++ + ++
Sbjct: 451 DLDEDEIDAEVL 462
Score = 504 (182.5 bits), Expect = 3.5e-49, Sum P(2) = 3.5e-49
Identities = 115/275 (41%), Positives = 167/275 (60%)
Query: 133 DLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTH 192
D +GV D++ L S S ++ V E P + DIGGLE+ +EL E + +P+ +
Sbjct: 463 DSLGVTMDNFRF--ALGSSNPSALRETVV-EVPNVRWEDIGGLEEVKRELRETVQMPVMY 519
Query: 193 KERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV 252
E+F + GV P KGVL +GPPGTGKTL+A+A A + +A F+ + GP+L+ M+ G+ V
Sbjct: 520 AEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSMWFGESESNV 579
Query: 253 RDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREV-QRTMLELLNQLDGFSSDDRIK 311
RD F A+ +PC++F+DE+D+I R S +GD R + +LL ++DG +S +
Sbjct: 580 RDIFDKARAAAPCVVFLDELDSIAKARGAS--AGDSGGGDRVVNQLLTEMDGVNSKKNVF 637
Query: 312 VIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARS 371
VI ATNR D +DPALMR GRLD+ I P P EEAR ILQ R V DV+ +A++
Sbjct: 638 VIGATNRPDQIDPALMRPGRLDQLIYVPLPDEEARFSILQTQLRHTPVAEDVDLRAVAKA 697
Query: 372 TDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 406
T F+GA L+ V A LA++ D+ E + + NE
Sbjct: 698 THGFSGADLEFVVQRAVKLAIK-DSIEEDIKRENE 731
Score = 37 (18.1 bits), Expect = 4.2e-50, Sum P(2) = 4.2e-50
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 3 TAMVEDPNLEDDQLSSMT----ADDIVRASRLLDNEIRV 37
T +V+ +D L +T D + R +R++ N +RV
Sbjct: 76 TVVVKGKRRKDTVLIVLTDEEMEDGVARINRVVRNNLRV 114
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 510 (184.6 bits), Expect = 4.8e-50, Sum P(2) = 4.8e-50
Identities = 109/273 (39%), Positives = 165/273 (60%)
Query: 134 LVGVNKDSYLIL--DTLPSEYDSRVKAMEVDEKPTE-DYNDIGGLEKQIQELVEAIVLPM 190
+V + Y I+ DT+ +K + +E E Y+DIGG KQ+ ++ E + LP+
Sbjct: 165 VVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPL 224
Query: 191 THKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAK 250
H F+ +GV+PP+G+LLYGPPGTGKTL+ARA A +T A F + GP+++ G+
Sbjct: 225 RHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES 284
Query: 251 LVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRI 310
+R AF+ A++ +P IIFIDE+DAI KR + G+ E +R + +LL +DG +
Sbjct: 285 NLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHV 341
Query: 311 KVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELAR 370
V+AATNR + +DPAL R GR DR+++ P R ILQIH++ M + DV+ E++A
Sbjct: 342 IVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVAN 401
Query: 371 STDDFNGAQLKAVCVEAGMLALRRDATEVNHED 403
T GA L A+C EA + A+R+ ++ ED
Sbjct: 402 ETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Score = 506 (183.2 bits), Expect = 1.4e-49, Sum P(2) = 1.4e-49
Identities = 101/243 (41%), Positives = 150/243 (61%)
Query: 161 VDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 220
V E P + DIGGLE +EL E + P+ H ++F K G+ P KGVL YGPPG GKTL+
Sbjct: 468 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 221 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 280
A+A A + A F+ + GP+L+ M+ G+ VR+ F A++ +PC++F DE+D+I R
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 281 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPH 340
+ G R + ++L ++DG S+ + +I ATNR DI+DPA++R GRLD+ I P
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 341 PTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA-TEV 399
P E++R IL+ + RK V DV+ E LA+ T+ F+GA L +C A LA+R +E+
Sbjct: 648 PDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEI 707
Query: 400 NHE 402
E
Sbjct: 708 RRE 710
Score = 38 (18.4 bits), Expect = 4.8e-50, Sum P(2) = 4.8e-50
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 11 LEDDQLSSMTADDIVRASRLLDNEIRV 37
L DD S D+ +R +R++ N +RV
Sbjct: 72 LSDDTCS----DEKIRMNRVVRNNLRV 94
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 510 (184.6 bits), Expect = 4.8e-50, Sum P(2) = 4.8e-50
Identities = 109/273 (39%), Positives = 165/273 (60%)
Query: 134 LVGVNKDSYLIL--DTLPSEYDSRVKAMEVDEKPTE-DYNDIGGLEKQIQELVEAIVLPM 190
+V + Y I+ DT+ +K + +E E Y+DIGG KQ+ ++ E + LP+
Sbjct: 165 VVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPL 224
Query: 191 THKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAK 250
H F+ +GV+PP+G+LLYGPPGTGKTL+ARA A +T A F + GP+++ G+
Sbjct: 225 RHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES 284
Query: 251 LVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRI 310
+R AF+ A++ +P IIFIDE+DAI KR + G+ E +R + +LL +DG +
Sbjct: 285 NLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHV 341
Query: 311 KVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELAR 370
V+AATNR + +DPAL R GR DR+++ P R ILQIH++ M + DV+ E++A
Sbjct: 342 IVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVAN 401
Query: 371 STDDFNGAQLKAVCVEAGMLALRRDATEVNHED 403
T GA L A+C EA + A+R+ ++ ED
Sbjct: 402 ETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Score = 506 (183.2 bits), Expect = 1.4e-49, Sum P(2) = 1.4e-49
Identities = 101/243 (41%), Positives = 150/243 (61%)
Query: 161 VDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 220
V E P + DIGGLE +EL E + P+ H ++F K G+ P KGVL YGPPG GKTL+
Sbjct: 468 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 221 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 280
A+A A + A F+ + GP+L+ M+ G+ VR+ F A++ +PC++F DE+D+I R
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 281 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPH 340
+ G R + ++L ++DG S+ + +I ATNR DI+DPA++R GRLD+ I P
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 341 PTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA-TEV 399
P E++R IL+ + RK V DV+ E LA+ T+ F+GA L +C A LA+R +E+
Sbjct: 648 PDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEI 707
Query: 400 NHE 402
E
Sbjct: 708 RRE 710
Score = 38 (18.4 bits), Expect = 4.8e-50, Sum P(2) = 4.8e-50
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 11 LEDDQLSSMTADDIVRASRLLDNEIRV 37
L DD S D+ +R +R++ N +RV
Sbjct: 72 LSDDTCS----DEKIRMNRVVRNNLRV 94
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 510 (184.6 bits), Expect = 4.8e-50, Sum P(2) = 4.8e-50
Identities = 109/273 (39%), Positives = 165/273 (60%)
Query: 134 LVGVNKDSYLIL--DTLPSEYDSRVKAMEVDEKPTE-DYNDIGGLEKQIQELVEAIVLPM 190
+V + Y I+ DT+ +K + +E E Y+DIGG KQ+ ++ E + LP+
Sbjct: 165 VVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPL 224
Query: 191 THKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAK 250
H F+ +GV+PP+G+LLYGPPGTGKTL+ARA A +T A F + GP+++ G+
Sbjct: 225 RHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES 284
Query: 251 LVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRI 310
+R AF+ A++ +P IIFIDE+DAI KR + G+ E +R + +LL +DG +
Sbjct: 285 NLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHV 341
Query: 311 KVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELAR 370
V+AATNR + +DPAL R GR DR+++ P R ILQIH++ M + DV+ E++A
Sbjct: 342 IVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVAN 401
Query: 371 STDDFNGAQLKAVCVEAGMLALRRDATEVNHED 403
T GA L A+C EA + A+R+ ++ ED
Sbjct: 402 ETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Score = 506 (183.2 bits), Expect = 1.4e-49, Sum P(2) = 1.4e-49
Identities = 101/243 (41%), Positives = 150/243 (61%)
Query: 161 VDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 220
V E P + DIGGLE +EL E + P+ H ++F K G+ P KGVL YGPPG GKTL+
Sbjct: 468 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 221 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 280
A+A A + A F+ + GP+L+ M+ G+ VR+ F A++ +PC++F DE+D+I R
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 281 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPH 340
+ G R + ++L ++DG S+ + +I ATNR DI+DPA++R GRLD+ I P
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 341 PTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA-TEV 399
P E++R IL+ + RK V DV+ E LA+ T+ F+GA L +C A LA+R +E+
Sbjct: 648 PDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEI 707
Query: 400 NHE 402
E
Sbjct: 708 RRE 710
Score = 38 (18.4 bits), Expect = 4.8e-50, Sum P(2) = 4.8e-50
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 11 LEDDQLSSMTADDIVRASRLLDNEIRV 37
L DD S D+ +R +R++ N +RV
Sbjct: 72 LSDDTCS----DEKIRMNRVVRNNLRV 94
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 510 (184.6 bits), Expect = 4.8e-50, Sum P(2) = 4.8e-50
Identities = 109/273 (39%), Positives = 165/273 (60%)
Query: 134 LVGVNKDSYLIL--DTLPSEYDSRVKAMEVDEKPTE-DYNDIGGLEKQIQELVEAIVLPM 190
+V + Y I+ DT+ +K + +E E Y+DIGG KQ+ ++ E + LP+
Sbjct: 165 VVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPL 224
Query: 191 THKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAK 250
H F+ +GV+PP+G+LLYGPPGTGKTL+ARA A +T A F + GP+++ G+
Sbjct: 225 RHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES 284
Query: 251 LVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRI 310
+R AF+ A++ +P IIFIDE+DAI KR + G+ E +R + +LL +DG +
Sbjct: 285 NLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHV 341
Query: 311 KVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELAR 370
V+AATNR + +DPAL R GR DR+++ P R ILQIH++ M + DV+ E++A
Sbjct: 342 IVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVAN 401
Query: 371 STDDFNGAQLKAVCVEAGMLALRRDATEVNHED 403
T GA L A+C EA + A+R+ ++ ED
Sbjct: 402 ETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Score = 506 (183.2 bits), Expect = 1.4e-49, Sum P(2) = 1.4e-49
Identities = 101/243 (41%), Positives = 150/243 (61%)
Query: 161 VDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 220
V E P + DIGGLE +EL E + P+ H ++F K G+ P KGVL YGPPG GKTL+
Sbjct: 468 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 221 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 280
A+A A + A F+ + GP+L+ M+ G+ VR+ F A++ +PC++F DE+D+I R
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 281 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPH 340
+ G R + ++L ++DG S+ + +I ATNR DI+DPA++R GRLD+ I P
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 341 PTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA-TEV 399
P E++R IL+ + RK V DV+ E LA+ T+ F+GA L +C A LA+R +E+
Sbjct: 648 PDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEI 707
Query: 400 NHE 402
E
Sbjct: 708 RRE 710
Score = 38 (18.4 bits), Expect = 4.8e-50, Sum P(2) = 4.8e-50
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 11 LEDDQLSSMTADDIVRASRLLDNEIRV 37
L DD S D+ +R +R++ N +RV
Sbjct: 72 LSDDTCS----DEKIRMNRVVRNNLRV 94
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 510 (184.6 bits), Expect = 4.8e-50, Sum P(2) = 4.8e-50
Identities = 109/273 (39%), Positives = 165/273 (60%)
Query: 134 LVGVNKDSYLIL--DTLPSEYDSRVKAMEVDEKPTE-DYNDIGGLEKQIQELVEAIVLPM 190
+V + Y I+ DT+ +K + +E E Y+DIGG KQ+ ++ E + LP+
Sbjct: 165 VVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPL 224
Query: 191 THKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAK 250
H F+ +GV+PP+G+LLYGPPGTGKTL+ARA A +T A F + GP+++ G+
Sbjct: 225 RHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES 284
Query: 251 LVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRI 310
+R AF+ A++ +P IIFIDE+DAI KR + G+ E +R + +LL +DG +
Sbjct: 285 NLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHV 341
Query: 311 KVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELAR 370
V+AATNR + +DPAL R GR DR+++ P R ILQIH++ M + DV+ E++A
Sbjct: 342 IVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVAN 401
Query: 371 STDDFNGAQLKAVCVEAGMLALRRDATEVNHED 403
T GA L A+C EA + A+R+ ++ ED
Sbjct: 402 ETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Score = 506 (183.2 bits), Expect = 1.4e-49, Sum P(2) = 1.4e-49
Identities = 101/243 (41%), Positives = 150/243 (61%)
Query: 161 VDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 220
V E P + DIGGLE +EL E + P+ H ++F K G+ P KGVL YGPPG GKTL+
Sbjct: 468 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 221 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 280
A+A A + A F+ + GP+L+ M+ G+ VR+ F A++ +PC++F DE+D+I R
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 281 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPH 340
+ G R + ++L ++DG S+ + +I ATNR DI+DPA++R GRLD+ I P
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 341 PTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA-TEV 399
P E++R IL+ + RK V DV+ E LA+ T+ F+GA L +C A LA+R +E+
Sbjct: 648 PDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEI 707
Query: 400 NHE 402
E
Sbjct: 708 RRE 710
Score = 38 (18.4 bits), Expect = 4.8e-50, Sum P(2) = 4.8e-50
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 11 LEDDQLSSMTADDIVRASRLLDNEIRV 37
L DD S D+ +R +R++ N +RV
Sbjct: 72 LSDDTCS----DEKIRMNRVVRNNLRV 94
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 510 (184.6 bits), Expect = 4.8e-50, Sum P(2) = 4.8e-50
Identities = 109/273 (39%), Positives = 165/273 (60%)
Query: 134 LVGVNKDSYLIL--DTLPSEYDSRVKAMEVDEKPTE-DYNDIGGLEKQIQELVEAIVLPM 190
+V + Y I+ DT+ +K + +E E Y+DIGG KQ+ ++ E + LP+
Sbjct: 165 VVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPL 224
Query: 191 THKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAK 250
H F+ +GV+PP+G+LLYGPPGTGKTL+ARA A +T A F + GP+++ G+
Sbjct: 225 RHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES 284
Query: 251 LVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRI 310
+R AF+ A++ +P IIFIDE+DAI KR + G+ E +R + +LL +DG +
Sbjct: 285 NLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHV 341
Query: 311 KVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELAR 370
V+AATNR + +DPAL R GR DR+++ P R ILQIH++ M + DV+ E++A
Sbjct: 342 IVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVAN 401
Query: 371 STDDFNGAQLKAVCVEAGMLALRRDATEVNHED 403
T GA L A+C EA + A+R+ ++ ED
Sbjct: 402 ETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Score = 503 (182.1 bits), Expect = 3.1e-49, Sum P(2) = 3.1e-49
Identities = 100/243 (41%), Positives = 150/243 (61%)
Query: 161 VDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 220
V E P + DIGGLE +EL + + P+ H ++F K G+ P KGVL YGPPG GKTL+
Sbjct: 468 VVEVPQVTWEDIGGLEDVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 221 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 280
A+A A + A F+ + GP+L+ M+ G+ VR+ F A++ +PC++F DE+D+I R
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 281 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPH 340
+ G R + ++L ++DG S+ + +I ATNR DI+DPA++R GRLD+ I P
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 341 PTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA-TEV 399
P E++R IL+ + RK V DV+ E LA+ T+ F+GA L +C A LA+R +E+
Sbjct: 648 PDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEI 707
Query: 400 NHE 402
E
Sbjct: 708 RRE 710
Score = 38 (18.4 bits), Expect = 4.8e-50, Sum P(2) = 4.8e-50
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 11 LEDDQLSSMTADDIVRASRLLDNEIRV 37
L DD S D+ +R +R++ N +RV
Sbjct: 72 LSDDTCS----DEKIRMNRVVRNNLRV 94
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 510 (184.6 bits), Expect = 5.0e-50, Sum P(2) = 5.0e-50
Identities = 109/273 (39%), Positives = 165/273 (60%)
Query: 134 LVGVNKDSYLIL--DTLPSEYDSRVKAMEVDEKPTE-DYNDIGGLEKQIQELVEAIVLPM 190
+V + Y I+ DT+ +K + +E E Y+DIGG KQ+ ++ E + LP+
Sbjct: 165 VVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPL 224
Query: 191 THKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAK 250
H F+ +GV+PP+G+LLYGPPGTGKTL+ARA A +T A F + GP+++ G+
Sbjct: 225 RHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES 284
Query: 251 LVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRI 310
+R AF+ A++ +P IIFIDE+DAI KR + G+ E +R + +LL +DG +
Sbjct: 285 NLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHV 341
Query: 311 KVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELAR 370
V+AATNR + +DPAL R GR DR+++ P R ILQIH++ M + DV+ E++A
Sbjct: 342 IVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVAN 401
Query: 371 STDDFNGAQLKAVCVEAGMLALRRDATEVNHED 403
T GA L A+C EA + A+R+ ++ ED
Sbjct: 402 ETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Score = 495 (179.3 bits), Expect = 2.6e-48, Sum P(2) = 2.6e-48
Identities = 101/245 (41%), Positives = 150/245 (61%)
Query: 161 VDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 220
V E P + DIGGLE +EL E + P+ H ++F K G+ P KGVL YGPPG GKTL+
Sbjct: 468 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 221 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 280
A+A A + A F+ + GP+L+ M+ G+ VR+ F A++ +PC++F DE+D+I R
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 281 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPH 340
+ G R + ++L ++DG S+ + +I ATNR DI+DPA++R GRLD+ I P
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 341 PTEEARARILQIHSRKMNVHP--DVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA-T 397
P E++R IL+ + RK V DV+ E LA+ T+ F+GA L +C A LA+R +
Sbjct: 648 PDEKSRVAILKANLRKSPVAKAGDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIES 707
Query: 398 EVNHE 402
E+ E
Sbjct: 708 EIRRE 712
Score = 38 (18.4 bits), Expect = 5.0e-50, Sum P(2) = 5.0e-50
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 11 LEDDQLSSMTADDIVRASRLLDNEIRV 37
L DD S D+ +R +R++ N +RV
Sbjct: 72 LSDDTCS----DEKIRMNRVVRNNLRV 94
>TIGR_CMR|NSE_0423 [details] [associations]
symbol:NSE_0423 "ATP-dependent metalloprotease FtsH"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 EMBL:CP000237 GenomeReviews:CP000237_GR
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001 RefSeq:YP_506309.1
ProteinModelPortal:Q2GDY7 SMR:Q2GDY7 STRING:Q2GDY7 GeneID:3931660
KEGG:nse:NSE_0423 PATRIC:22680905 OMA:ENIESLH
ProtClustDB:CLSK749654 BioCyc:NSEN222891:GHFU-445-MONOMER
Uniprot:Q2GDY7
Length = 636
Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
Identities = 103/236 (43%), Positives = 155/236 (65%)
Query: 169 YNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQT 228
++D+ G+++ +EL E IV + ++FQKLG + PKG LL GPPGTGKTL+A+A A +
Sbjct: 156 FHDVAGIDEAKEELAE-IVEFLREPKKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAGEA 214
Query: 229 NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDR 288
F ++G V+MF+G GA VRD F+ K+ +PC+IFIDEIDA+G R G+
Sbjct: 215 KVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCLIFIDEIDAVGRHRGVGFGGGND 274
Query: 289 EVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARAR 348
E ++T+ +LL ++DGF +++ + +IAATNR D+LDPAL+R GR DR+I P R +
Sbjct: 275 EREQTLNQLLVEMDGFEANEGVIIIAATNRPDVLDPALLRPGRFDRQITISIPDIAGRQK 334
Query: 349 ILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDF 404
IL++H +K+ P+V +AR T F+GA L + E+ ++A RR+ V +EDF
Sbjct: 335 ILEVHLKKIPTAPNVEVSIIARGTPGFSGADLANLVNESALIAARRNKKVVTNEDF 390
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 510 (184.6 bits), Expect = 6.3e-50, Sum P(2) = 6.3e-50
Identities = 109/273 (39%), Positives = 165/273 (60%)
Query: 134 LVGVNKDSYLIL--DTLPSEYDSRVKAMEVDEKPTE-DYNDIGGLEKQIQELVEAIVLPM 190
+V + Y I+ DT+ +K + +E E Y+DIGG KQ+ ++ E + LP+
Sbjct: 181 VVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPL 240
Query: 191 THKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAK 250
H F+ +GV+PP+G+LLYGPPGTGKTL+ARA A +T A F + GP+++ G+
Sbjct: 241 RHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES 300
Query: 251 LVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRI 310
+R AF+ A++ +P IIFIDE+DAI KR + G+ E +R + +LL +DG +
Sbjct: 301 NLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHV 357
Query: 311 KVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELAR 370
V+AATNR + +DPAL R GR DR+++ P R ILQIH++ M + DV+ E++A
Sbjct: 358 IVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVAN 417
Query: 371 STDDFNGAQLKAVCVEAGMLALRRDATEVNHED 403
T GA L A+C EA + A+R+ ++ ED
Sbjct: 418 ETHGHVGADLAALCSEAALQAIRKKMDLIDLED 450
Score = 506 (183.2 bits), Expect = 1.8e-49, Sum P(2) = 1.8e-49
Identities = 101/243 (41%), Positives = 150/243 (61%)
Query: 161 VDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 220
V E P + DIGGLE +EL E + P+ H ++F K G+ P KGVL YGPPG GKTL+
Sbjct: 484 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 543
Query: 221 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 280
A+A A + A F+ + GP+L+ M+ G+ VR+ F A++ +PC++F DE+D+I R
Sbjct: 544 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 603
Query: 281 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPH 340
+ G R + ++L ++DG S+ + +I ATNR DI+DPA++R GRLD+ I P
Sbjct: 604 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 663
Query: 341 PTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA-TEV 399
P E++R IL+ + RK V DV+ E LA+ T+ F+GA L +C A LA+R +E+
Sbjct: 664 PDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEI 723
Query: 400 NHE 402
E
Sbjct: 724 RRE 726
Score = 38 (18.4 bits), Expect = 6.3e-50, Sum P(2) = 6.3e-50
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 11 LEDDQLSSMTADDIVRASRLLDNEIRV 37
L DD S D+ +R +R++ N +RV
Sbjct: 88 LSDDTCS----DEKIRMNRVVRNNLRV 110
>UNIPROTKB|E2RM61 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00550000074947
EMBL:AAEX03006359 ProteinModelPortal:E2RM61 PRIDE:E2RM61
Ensembl:ENSCAFT00000020231 OMA:DSNCELQ NextBio:20855489
Uniprot:E2RM61
Length = 251
Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 104/210 (49%), Positives = 142/210 (67%)
Query: 104 KCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDE 163
K V++K + V +D + + P V + DSY + LP++ D V M V++
Sbjct: 34 KKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEK 93
Query: 164 KPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARA 223
P Y IGGL+KQI+E+ E I LP+ H E F+ LG+ PKGVLLYGPPGTGKTL+ARA
Sbjct: 94 VPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARA 153
Query: 224 CAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSE 283
A T+ TF++++G +LVQ FIG+GA++VR+ F +A+E +P IIF+DEID+IG+ R +
Sbjct: 154 VAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGG 213
Query: 284 VSGDREVQRTMLELLNQLDGFSSDDRIKVI 313
GD EVQRTMLELLNQLDGF + IKV+
Sbjct: 214 SGGDSEVQRTMLELLNQLDGFEATKNIKVM 243
>TIGR_CMR|GSU_1180 [details] [associations]
symbol:GSU_1180 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952233.1 ProteinModelPortal:Q74DY5 SMR:Q74DY5
GeneID:2686793 KEGG:gsu:GSU1180 PATRIC:22025134 OMA:VCQWGMS
ProtClustDB:CLSK828230 BioCyc:GSUL243231:GH27-1166-MONOMER
Uniprot:Q74DY5
Length = 617
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 106/234 (45%), Positives = 151/234 (64%)
Query: 169 YNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQT 228
++D+ G+E EL E IV + ++FQ++G + PKGVLL GPPGTGKTL+ARA A +
Sbjct: 174 FDDVAGMENPKMELKE-IVDYLRDPKKFQRIGGKVPKGVLLVGPPGTGKTLLARAVAGEA 232
Query: 229 NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDR 288
+ TFL ++ Q ++MF+G GA VRD F AK+ +P IIFIDE+DA+G R G
Sbjct: 233 DVTFLSISASQFIEMFVGVGAGRVRDLFATAKKSAPSIIFIDELDAVGRSRGAGLGGGHD 292
Query: 289 EVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARAR 348
E ++T+ +LL+++DGF S D + V+AATNR D+LDPAL+R GR DR + P R +
Sbjct: 293 EREQTLNQLLSEMDGFDSHDEVIVMAATNRPDVLDPALLRPGRFDRHVVIDRPDWRDREK 352
Query: 349 ILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHE 402
IL +H+RK+ + DV+ +AR T GA L+ + EA +LA R +A V E
Sbjct: 353 ILHVHTRKIPLDKDVDLAVIARGTPGMAGADLENLVNEAAILAARENAATVTME 406
>TAIR|locus:2009235 [details] [associations]
symbol:FTSH8 "FTSH protease 8" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA;IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=TAS] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AC007592
eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798 GO:GO:0010304
ProtClustDB:CLSN2679937 EMBL:AF419565 EMBL:BT002649 EMBL:BT003813
EMBL:AY045951 IPI:IPI00539195 RefSeq:NP_563766.3 UniGene:At.17054
ProteinModelPortal:Q8W585 SMR:Q8W585 STRING:Q8W585 MEROPS:M41.025
PaxDb:Q8W585 PRIDE:Q8W585 ProMEX:Q8W585 EnsemblPlants:AT1G06430.1
GeneID:837154 KEGG:ath:AT1G06430 GeneFarm:2474 TAIR:At1g06430
InParanoid:Q8W585 OMA:NANADEQ PhylomeDB:Q8W585
Genevestigator:Q8W585 Uniprot:Q8W585
Length = 685
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 102/245 (41%), Positives = 156/245 (63%)
Query: 169 YNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQT 228
++D+ G+++ Q+ +E + + ERF +G R PKGVLL GPPGTGKTL+A+A A +
Sbjct: 219 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 277
Query: 229 NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDR 288
F ++G + V+MF+G GA VRD F+ AKE +PCI+F+DEIDA+G +R G+
Sbjct: 278 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGND 337
Query: 289 EVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARAR 348
E ++T+ +LL ++DGF + + V+AATNRADILD AL+R GR DR++ P + R
Sbjct: 338 EREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTD 397
Query: 349 ILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGI 408
IL++HS V+ E +A T F+GA L + EA +LA RR T ++ ++ ++ I
Sbjct: 398 ILKVHSGNKKFESGVSLEVIAMRTPGFSGADLANLLNEAAILAGRRGKTAISSKEIDDSI 457
Query: 409 IQVQA 413
++ A
Sbjct: 458 DRIVA 462
>TAIR|locus:2052806 [details] [associations]
symbol:VAR2 "VARIEGATED 2" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008237 "metallopeptidase activity"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010027
"thylakoid membrane organization" evidence=RCA;IMP] [GO:0009507
"chloroplast" evidence=IDA] [GO:0010205 "photoinhibition"
evidence=IMP] [GO:0031977 "thylakoid lumen" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA;TAS]
[GO:0016020 "membrane" evidence=IDA] [GO:0030163 "protein catabolic
process" evidence=IDA] [GO:0072593 "reactive oxygen species
metabolic process" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0034660 "ncRNA
metabolic process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0010206
"photosystem II repair" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0008237 GO:GO:0004222 EMBL:AC004669
GO:GO:0010027 GO:GO:0072593 GO:GO:0010205 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0031977
GO:GO:0004176 GO:GO:0010206 HOGENOM:HOG000217276 KO:K03798
GO:GO:0010304 EMBL:AF135189 EMBL:AY045599 EMBL:AY093791
EMBL:AK221155 IPI:IPI00546467 PIR:F84714 RefSeq:NP_850156.1
UniGene:At.22024 UniGene:At.71129 UniGene:At.75189
ProteinModelPortal:O80860 SMR:O80860 IntAct:O80860 STRING:O80860
MEROPS:M41.005 World-2DPAGE:0003:O80860 PaxDb:O80860 PRIDE:O80860
ProMEX:O80860 EnsemblPlants:AT2G30950.1 GeneID:817646
KEGG:ath:AT2G30950 GeneFarm:2504 TAIR:At2g30950 InParanoid:O80860
OMA:LEIIAMR PhylomeDB:O80860 ProtClustDB:CLSN2679937
Genevestigator:O80860 Uniprot:O80860
Length = 695
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 102/265 (38%), Positives = 163/265 (61%)
Query: 149 PSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVL 208
P ++ +++ ++D+ G+++ Q+ +E + + ERF +G + PKGVL
Sbjct: 206 PLQFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGAKIPKGVL 264
Query: 209 LYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIF 268
L GPPGTGKTL+A+A A + F ++G + V+MF+G GA VRD F+ AKE +PCI+F
Sbjct: 265 LIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVF 324
Query: 269 IDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMR 328
+DEIDA+G +R G+ E ++T+ +LL ++DGF + + V+AATNRADILD AL+R
Sbjct: 325 VDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLR 384
Query: 329 SGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAG 388
GR DR++ P + R IL++H+ DV+ E +A T F+GA L + EA
Sbjct: 385 PGRFDRQVSVDVPDVKGRTDILKVHAGNKKFDNDVSLEIIAMRTPGFSGADLANLLNEAA 444
Query: 389 MLALRRDATEVNHEDFNEGIIQVQA 413
+LA RR T ++ ++ ++ I ++ A
Sbjct: 445 ILAGRRARTSISSKEIDDSIDRIVA 469
>UNIPROTKB|J3QQM1 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:AC015651 ChiTaRS:PSMC5
HGNC:HGNC:9552 Ensembl:ENST00000582130 Uniprot:J3QQM1
Length = 263
Score = 494 (179.0 bits), Expect = 2.0e-49, Sum P(2) = 2.0e-49
Identities = 96/176 (54%), Positives = 127/176 (72%)
Query: 128 KLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIV 187
K+ P V + DSY + LP++ D V M V++ P Y IGGL+KQI+E+ E I
Sbjct: 88 KVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIE 147
Query: 188 LPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGD 247
LP+ H E F+ LG+ PKGVLLYGPPGTGKTL+ARA A T+ TF++++G +LVQ FIG+
Sbjct: 148 LPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGE 207
Query: 248 GAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDG 303
GA++VR+ F +A+E +P IIF+DEID+IG+ R + GD EVQRTMLELLNQLDG
Sbjct: 208 GARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDG 263
Score = 38 (18.4 bits), Expect = 2.0e-49, Sum P(2) = 2.0e-49
Identities = 7/13 (53%), Positives = 12/13 (92%)
Query: 31 LDNEIRVLKEELQ 43
L+ ++R+L+EELQ
Sbjct: 52 LNAKVRLLREELQ 64
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 518 (187.4 bits), Expect = 3.0e-49, P = 3.0e-49
Identities = 110/291 (37%), Positives = 177/291 (60%)
Query: 129 LKPGDLV----GVNKDSYLILDTLPSEY-----DSRV-----KAMEVDEKPTED--YNDI 172
++ GDL G+ + +++T P+EY D+ + DE+ +D Y+D+
Sbjct: 150 VRKGDLFLVRGGMRSVEFKVIETDPAEYCVVAPDTEIFCEGEPVKREDEERLDDVGYDDV 209
Query: 173 GGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATF 232
GG+ KQ+ ++ E + LP+ H + F+ +GV+PPKG+LLYGPPG+GKTL+ARA A +T A F
Sbjct: 210 GGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFF 269
Query: 233 LKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQR 292
+ GP+++ G+ +R AF+ A++ +P IIFIDEID+I KR + +G+ E +R
Sbjct: 270 FCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTNGEVE-RR 326
Query: 293 TMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQI 352
+ +LL +DG S + V+ ATNR + +DPAL R GR DR+I+ P E R +L+I
Sbjct: 327 IVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRI 386
Query: 353 HSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 403
H++ M + DV+ E +++ T + GA L A+C EA + +R ++ ED
Sbjct: 387 HTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 437
Score = 495 (179.3 bits), Expect = 1.1e-46, P = 1.1e-46
Identities = 98/236 (41%), Positives = 145/236 (61%)
Query: 161 VDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 220
V E P +NDIGGLE +EL E + P+ H E+F+K G+ P KGVL YGPPG GKTL+
Sbjct: 471 VVEVPNVSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 530
Query: 221 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 280
A+A A + A F+ + GP+L+ M+ G+ VR+ F A++ +PC++F DE+D+I T+R
Sbjct: 531 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRG 590
Query: 281 D-SEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFP 339
S G R + +LL ++DG ++ + +I ATNR DI+D AL+R GRLD+ I P
Sbjct: 591 GGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIP 650
Query: 340 HPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD 395
P E++R I + RK + DV+ LA+ T F+GA + +C A A+R +
Sbjct: 651 LPDEDSRLNIFKAALRKSPIAKDVDIGALAKYTQGFSGADITEICQRACKYAIREN 706
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 503 (182.1 bits), Expect = 3.0e-49, Sum P(2) = 3.0e-49
Identities = 100/243 (41%), Positives = 150/243 (61%)
Query: 161 VDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 220
V E P + DIGGLE +EL E + P+ H ++F K G+ P KGVL YGPPG GKTL+
Sbjct: 466 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 525
Query: 221 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 280
A+A A + A F+ + GP+L+ M+ G+ VR+ F A++ +PC++F DE+D+I R
Sbjct: 526 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 585
Query: 281 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPH 340
+ G R + ++L ++DG S+ + +I ATNR DI+DPA++R GRLD+ I P
Sbjct: 586 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 645
Query: 341 PTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA-TEV 399
P E++R IL+ + RK V DV+ + LA+ T+ F+GA L +C A LA+R +E+
Sbjct: 646 PDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIESEI 705
Query: 400 NHE 402
E
Sbjct: 706 RRE 708
Score = 427 (155.4 bits), Expect = 9.8e-41, Sum P(2) = 9.8e-41
Identities = 97/273 (35%), Positives = 147/273 (53%)
Query: 134 LVGVNKDSYLIL--DTLPSEYDSRVKAMEVDEKPTE-DYNDIGGLEKQIQELVEAIVLPM 190
+V + Y I+ DT+ +K + +E E Y+DIGG KQ+ ++ E + LP+
Sbjct: 165 VVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPL 224
Query: 191 THKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAK 250
H F+ +GV+PP+G+LLYGPPGTGKTL+ARA A +T A F + GP+++ G+G
Sbjct: 225 RHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGEGES 284
Query: 251 LVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRI 310
R A D + + EV +R + +LL +DG +
Sbjct: 285 ACRKKISPAPPPLKTAGIFKSDDCFPSPQTHGEVE-----RRIVSQLLTLMDGLKQRAHV 339
Query: 311 KVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELAR 370
V+AATNR + +DPAL R GR DR+++ P R ILQIH++ M + DV+ E++A
Sbjct: 340 IVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVAN 399
Query: 371 STDDFNGAQLKAVCVEAGMLALRRDATEVNHED 403
T GA L A+C EA + A+R+ ++ ED
Sbjct: 400 ETHGHVGADLAALCSEAALQAIRKKMDLIDLED 432
Score = 38 (18.4 bits), Expect = 3.0e-49, Sum P(2) = 3.0e-49
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 11 LEDDQLSSMTADDIVRASRLLDNEIRV 37
L DD S D+ +R +R++ N +RV
Sbjct: 72 LSDDTCS----DEKIRMNRVVRNNLRV 94
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 503 (182.1 bits), Expect = 3.3e-49, Sum P(2) = 3.3e-49
Identities = 100/243 (41%), Positives = 150/243 (61%)
Query: 161 VDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 220
V E P + DIGGLE +EL E + P+ H ++F K G+ P KGVL YGPPG GKTL+
Sbjct: 472 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 531
Query: 221 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 280
A+A A + A F+ + GP+L+ M+ G+ VR+ F A++ +PC++F DE+D+I R
Sbjct: 532 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 591
Query: 281 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPH 340
+ G R + ++L ++DG S+ + +I ATNR DI+DPA++R GRLD+ I P
Sbjct: 592 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 651
Query: 341 PTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA-TEV 399
P E++R IL+ + RK V DV+ + LA+ T+ F+GA L +C A LA+R +E+
Sbjct: 652 PDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIESEI 711
Query: 400 NHE 402
E
Sbjct: 712 RRE 714
Score = 498 (180.4 bits), Expect = 1.2e-48, Sum P(2) = 1.2e-48
Identities = 108/275 (39%), Positives = 165/275 (60%)
Query: 134 LVGVNKDSYLIL--DTLPSEYDSRVKAMEVDEKPTE-DYNDIGGLEKQIQELVEAIVLPM 190
+V + Y I+ DT+ +K + +E E Y+DIGG KQ+ ++ E + LP+
Sbjct: 165 VVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPL 224
Query: 191 THKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAK 250
H F+ +GV+PP+G+LLYGPPGTGKTL+ARA A +T A F + GP+++ G+
Sbjct: 225 RHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES 284
Query: 251 LVRDAFQLAKEKSPCIIFIDEIDAIGTKR-FDS-EVSGDREVQRTMLELLNQLDGFSSDD 308
+R AF+ ++ +P IIFIDE+DAI + F S + G+ E +R + +LL +DG
Sbjct: 285 NLRKAFEETEKNAPAIIFIDELDAIASDDCFPSPQTHGEVE-RRIVSQLLTLMDGLKQRA 343
Query: 309 RIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEEL 368
+ V+AATNR + +DPAL R GR DR+++ P R ILQIH++ M + DV+ E++
Sbjct: 344 HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQV 403
Query: 369 ARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 403
A T GA L A+C EA + A+R+ ++ ED
Sbjct: 404 ANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 438
Score = 38 (18.4 bits), Expect = 3.3e-49, Sum P(2) = 3.3e-49
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 11 LEDDQLSSMTADDIVRASRLLDNEIRV 37
L DD S D+ +R +R++ N +RV
Sbjct: 72 LSDDTCS----DEKIRMNRVVRNNLRV 94
>UNIPROTKB|P0C5C0 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:1773 "Mycobacterium tuberculosis" [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP;IDA] [GO:0006979 "response
to oxidative stress" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0040007
"growth" evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0040007 GO:GO:0006979 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0046872
EMBL:BX842583 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0010468
HOGENOM:HOG000217276 KO:K03798 PIR:C70956 RefSeq:NP_218127.1
RefSeq:NP_338259.1 RefSeq:YP_006517099.1 ProteinModelPortal:P0C5C0
SMR:P0C5C0 PRIDE:P0C5C0 EnsemblBacteria:EBMYCT00000001212
EnsemblBacteria:EBMYCT00000069111 GeneID:13317218 GeneID:885732
GeneID:926520 KEGG:mtc:MT3714 KEGG:mtu:Rv3610c KEGG:mtv:RVBD_3610c
PATRIC:18129921 TubercuList:Rv3610c OMA:RSEMIAR
ProtClustDB:CLSK792593 Uniprot:P0C5C0
Length = 760
Score = 515 (186.3 bits), Expect = 3.6e-49, P = 3.6e-49
Identities = 109/258 (42%), Positives = 156/258 (60%)
Query: 154 SRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPP 213
SR K + D P + D+ G+++ ++EL E I + + R+Q LG + PKGVLLYGPP
Sbjct: 148 SRAKQLSKD-MPKTTFADVAGVDEAVEELYE-IKDFLQNPSRYQALGAKIPKGVLLYGPP 205
Query: 214 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEID 273
GTGKTL+ARA A + F ++G V+MF+G GA VRD F+ AK+ SPCIIF+DEID
Sbjct: 206 GTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEID 265
Query: 274 AIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLD 333
A+G +R G E ++T+ +LL ++DGF + +IAATNR DILDPAL+R GR D
Sbjct: 266 AVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFD 325
Query: 334 RKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 393
R+I +P R +L++HS+ + D + + LA+ T GA L V EA +L R
Sbjct: 326 RQIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTGADLANVINEAALLTAR 385
Query: 394 RDATEVNHEDFNEGIIQV 411
+ T + E + +V
Sbjct: 386 ENGTVITGPALEEAVDRV 403
>FB|FBgn0032450 [details] [associations]
symbol:CG5776 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014134 GO:GO:0006200 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 KO:K14575 GeneTree:ENSGT00700000104502 OMA:MLLRCVA
EMBL:AY051725 RefSeq:NP_609585.1 UniGene:Dm.8715 SMR:Q9VK63
EnsemblMetazoa:FBtr0080407 EnsemblMetazoa:FBtr0329925 GeneID:34680
KEGG:dme:Dmel_CG5776 UCSC:CG5776-RA FlyBase:FBgn0032450
InParanoid:Q9VK63 OrthoDB:EOG4547DV GenomeRNAi:34680 NextBio:789659
Uniprot:Q9VK63
Length = 799
Score = 515 (186.3 bits), Expect = 5.9e-49, P = 5.9e-49
Identities = 101/261 (38%), Positives = 164/261 (62%)
Query: 163 EKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMAR 222
E P ++DIGG + + +AI P+ H ++FQ+LG++PP+G+L++GPPG KT++A+
Sbjct: 528 ECPNVQWSDIGGQSELRLAMQQAIEWPLLHADKFQRLGIKPPRGILMFGPPGCSKTMIAK 587
Query: 223 ACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF-- 280
A A ++ FL + GP+L M++G+ + VR+ F+ A++ +P I+F DEIDAIG +R
Sbjct: 588 ALATESKLNFLSIKGPELFSMWVGESERAVREVFRKARQVAPAIVFFDEIDAIGGERSEG 647
Query: 281 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPH 340
D SG +R + +LL +LDG + + ++AATNR D++D AL+R GR+DR +
Sbjct: 648 DGSSSGSSVKERVLTQLLTELDGVEALQNVTIVAATNRPDMIDKALLRPGRIDRILYVGL 707
Query: 341 PTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR--DATE 398
P EAR IL+I R M + DV+ E+L + T+ ++GA+++AVC EA + AL + +A +
Sbjct: 708 PQCEARREILKIKLRAMPISNDVDMEKLVQLTEGYSGAEIQAVCHEAALRALEQSFEAED 767
Query: 399 VNHEDFNEGIIQVQAKKKASL 419
V DF + V + L
Sbjct: 768 VKWTDFEHALKAVPPRTSPEL 788
Score = 219 (82.2 bits), Expect = 7.6e-15, P = 7.6e-15
Identities = 71/246 (28%), Positives = 129/246 (52%)
Query: 172 IGGLEKQIQELVEAIVLPMTHKERFQKL--GVRPPKGVLLYGPPGTGKTLMARA-CA--- 225
IGGL++Q+Q LVE M + F+ L G+R +G+LLYG G GK+++ A CA
Sbjct: 274 IGGLDRQLQ-LVEE---SMEYALGFRTLPAGLRVSRGLLLYGATGCGKSMVLEAMCAVAE 329
Query: 226 --AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEK--SPCIIFIDEIDAIGTKRFD 281
+Q + +++ ++ F+G+ + + F+ A P ++ I+++ + K+ +
Sbjct: 330 ERSQGHVQLIRINSGEVYSKFLGETEQKLGAIFERAYNHYPHPTLLLIEDVHNLCPKQEN 389
Query: 282 SEVSGDREVQRTMLELLNQLDGFSSDDRIK-----VIAATNRADILDPALMRSGRLDRKI 336
S++ V+R L L+ LD SS ++K V+A +++ D L P++ R+GRLD ++
Sbjct: 390 SDL-----VKRVSLAFLSLLDQLSSPSQLKGSKTFVLATSSQIDTLHPSIRRAGRLDNEV 444
Query: 337 EFPHPTEEARARILQIHSRKMNVH-PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD 395
E P+ +AR I++ + + D E +A T + GA L A V A ML + +
Sbjct: 445 ELGAPSSQARLEIVRCLIKSVEHQLSDEEVEHVASITHGYVGADL-ANLVYAAMLQAQPN 503
Query: 396 ATEVNH 401
++ H
Sbjct: 504 PLQMPH 509
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 514 (186.0 bits), Expect = 8.5e-49, P = 8.5e-49
Identities = 109/291 (37%), Positives = 177/291 (60%)
Query: 129 LKPGDLV----GVNKDSYLILDTLPSEY-----DSRV-----KAMEVDEKPTED--YNDI 172
++ GDL G+ + +++T P+EY D+ + DE+ ++ Y+D+
Sbjct: 150 VRKGDLFLVRGGMRSVEFKVIETDPAEYCVVAPDTEIFCEGEPVKREDEERLDEVGYDDV 209
Query: 173 GGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATF 232
GG+ KQ+ ++ E + LP+ H + F+ +GV+PPKG+LLYGPPG+GKTL+ARA A +T A F
Sbjct: 210 GGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFF 269
Query: 233 LKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQR 292
+ GP+++ G+ +R AF+ A++ +P IIFIDEID+I KR + +G+ E +R
Sbjct: 270 FCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTNGEVE-RR 326
Query: 293 TMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQI 352
+ +LL +DG S + V+ ATNR + +DPAL R GR DR+I+ P E R +L+I
Sbjct: 327 IVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRI 386
Query: 353 HSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 403
H++ M + DV+ E +++ T + GA L A+C EA + +R ++ ED
Sbjct: 387 HTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 437
Score = 495 (179.3 bits), Expect = 1.1e-46, P = 1.1e-46
Identities = 97/235 (41%), Positives = 144/235 (61%)
Query: 161 VDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 220
V E P + DIGGLE +EL E + P+ H E+F+K G+ P KGVL YGPPG GKTL+
Sbjct: 471 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 530
Query: 221 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 280
A+A A + A F+ + GP+L+ M+ G+ VR+ F A++ +PC++F DE+D+I T+R
Sbjct: 531 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRG 590
Query: 281 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPH 340
+S R + +LL ++DG ++ + +I ATNR DI+D AL+R GRLD+ I P
Sbjct: 591 NSAGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPL 650
Query: 341 PTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD 395
P E++R I + RK V DV+ LA+ T F+GA + +C A A+R +
Sbjct: 651 PDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGADITEICQRACKYAIREN 705
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 513 (185.6 bits), Expect = 1.1e-48, P = 1.1e-48
Identities = 111/303 (36%), Positives = 182/303 (60%)
Query: 129 LKPGDLV----GVNKDSYLILDTLPSEY-----DSRV-----KAMEVDEKPTED--YNDI 172
++ GDL G+ + +++T P+EY D+ + DE+ ++ Y+D+
Sbjct: 151 VRKGDLFLVRGGMRSIEFKVIETDPAEYCVVAPDTEIFCEGEPIKREDEERLDEVGYDDV 210
Query: 173 GGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATF 232
GG+ KQ+ ++ E + LP+ H + F+ +GV+PPKG+LLYGPPG+GKTL+ARA A +T A F
Sbjct: 211 GGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFF 270
Query: 233 LKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQR 292
+ GP+++ G+ +R AF+ A++ +P IIFIDEID+I KR + G+ E +R
Sbjct: 271 FCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTHGEVE-RR 327
Query: 293 TMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQI 352
+ +LL +DG S + V+ ATNR + +DPAL R GR DR+I+ P E R +L+I
Sbjct: 328 IVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRI 387
Query: 353 HSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR--DATEVNHEDFNEGIIQ 410
H++ M + DV+ E +++ T + GA L A+C EA + +R D +++ E+ + I+
Sbjct: 388 HTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKMDVIDLDDEEIDAEILN 447
Query: 411 VQA 413
A
Sbjct: 448 SMA 450
Score = 504 (182.5 bits), Expect = 1.1e-47, P = 1.1e-47
Identities = 98/235 (41%), Positives = 146/235 (62%)
Query: 161 VDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 220
V E P + DIGGLE +EL E + P+ H E+F+K G+ P KGVL YGPPG GKTL+
Sbjct: 472 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
Query: 221 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 280
A+A A + A F+ + GP+L+ M+ G+ VR+ F A++ +PC++F DE+D+I T+R
Sbjct: 532 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRG 591
Query: 281 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPH 340
+S R + +LL ++DG ++ + +I ATNR DI+DPAL+R GRLD+ I P
Sbjct: 592 NSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPL 651
Query: 341 PTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD 395
P EE+R +I + RK V DV+ LA+ T F+GA + +C + A+R +
Sbjct: 652 PDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQGFSGADITEICQRSCKYAIREN 706
>UNIPROTKB|E2RC37 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 CTD:166378 OMA:NDIRPSA
EMBL:AAEX03011797 RefSeq:XP_540960.2 ProteinModelPortal:E2RC37
Ensembl:ENSCAFT00000006393 GeneID:483840 KEGG:cfa:483840
Uniprot:E2RC37
Length = 893
Score = 515 (186.3 bits), Expect = 1.1e-48, P = 1.1e-48
Identities = 111/281 (39%), Positives = 163/281 (58%)
Query: 146 DTLPSEYDSRVKAM-EVD-EKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRP 203
D L D R AM EV + P ++DIGGLE +L +A+ P+ H E F ++G++P
Sbjct: 601 DFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPESFIRMGIQP 660
Query: 204 PKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKS 263
PKGVLLYGPPG KT++A+A A ++ FL + GP+L+ ++G+ + VR+ F+ A+ S
Sbjct: 661 PKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVS 720
Query: 264 PCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILD 323
P IIF DE+DA+ +R S +G+ R + +LL ++DG + ++AATNR D +D
Sbjct: 721 PSIIFFDELDALAIERGSSSGAGN-VADRVLAQLLTEMDGIEQLKDVTILAATNRPDRID 779
Query: 324 PALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAV 383
ALMR GR+DR I P P R IL + M + DVN +EL TD ++GA++ AV
Sbjct: 780 KALMRPGRIDRIIYVPLPDAATRREILNLQFHSMPISNDVNLDELIFQTDTYSGAEIIAV 839
Query: 384 CVEAGMLALRRD--ATEVNHEDFNEGIIQVQAKKKASLNYY 422
C EA +LAL D A + F + V + SL +
Sbjct: 840 CREAALLALEEDIQANSITRRHFTRALSTVTPRISKSLRRF 880
Score = 433 (157.5 bits), Expect = 8.8e-40, P = 8.8e-40
Identities = 104/277 (37%), Positives = 154/277 (55%)
Query: 123 LVDPDKLKPGDLVGV--NKDS-YLILDTLPSEYDS-RVKAMEVDEKPTEDYNDIGGLEKQ 178
L++ ++L VG N D Y I T + + E D + Y+ IGGL Q
Sbjct: 302 LINEERLLKSACVGAKCNTDIFYFISSTTRINFIKVHTNSEEEDNQFKVTYDMIGGLSSQ 361
Query: 179 IQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGP 238
++ + E I LP+ E F+ G+ PP+GVLLYGPPGTGKT++ARA A + A + GP
Sbjct: 362 LKAIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGP 421
Query: 239 QLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELL 298
+++ F G+ +R F A + P IIFIDE+DA+ KR ++ ++ V ++L L+
Sbjct: 422 EIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQNEVEKRVVASLLTLM 481
Query: 299 NQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQ-IHSRKM 357
+ + S+ ++ V+ ATNR LD AL R GR D++IE P R ILQ + R
Sbjct: 482 DGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAADRLDILQKLLQRVP 541
Query: 358 NVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 394
++ +V +LA S + GA LKA+C EAG+ ALRR
Sbjct: 542 HLLTEVELLQLANSAHGYVGADLKALCNEAGLYALRR 578
>ZFIN|ZDB-GENE-070912-46 [details] [associations]
symbol:afg3l2 "AFG3 ATPase family gene 3-like 2 (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-070912-46 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:10939 MEROPS:M41.007 EMBL:BX000484 EMBL:BC155655
IPI:IPI00513225 RefSeq:NP_001104667.1 UniGene:Dr.82691 SMR:A9JRG9
STRING:A9JRG9 Ensembl:ENSDART00000089834 GeneID:569168
KEGG:dre:569168 NextBio:20889547 Uniprot:A9JRG9
Length = 800
Score = 512 (185.3 bits), Expect = 1.3e-48, P = 1.3e-48
Identities = 107/266 (40%), Positives = 164/266 (61%)
Query: 150 SEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLL 209
SE ++V E+D K + D+ G E+ E++E + + + +++Q LG + PKG +L
Sbjct: 287 SETTAKVLRDEIDVK----FKDVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAIL 341
Query: 210 YGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFI 269
GPPGTGKTL+A+A A + N F+ + G + ++MF+G G VRD F LA++ +PCI+FI
Sbjct: 342 TGPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDLFVLARKNAPCILFI 401
Query: 270 DEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRS 329
DEIDA+G KR G E + T+ +LL ++DGF++ + V+A TNR DILDPALMR
Sbjct: 402 DEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTATNVVVLAGTNRPDILDPALMRP 461
Query: 330 GRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARS----TDDFNGAQLKAVCV 385
GR DR+I P + RA I ++H R + + +++ E LAR T F+GA + VC
Sbjct: 462 GRFDRQIYIGPPDIKGRASIFKVHLRPLKLEAELDKEALARKMAALTPGFSGADIANVCN 521
Query: 386 EAGMLALRRDATEVNHEDFNEGIIQV 411
EA ++A R + +N + F + I +V
Sbjct: 522 EAALIAARHLSDAINQKHFEQAIERV 547
>UNIPROTKB|P0AAI3 [details] [associations]
symbol:ftsH species:83333 "Escherichia coli K-12"
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0006508
"proteolysis" evidence=IEA;IDA] [GO:0043273 "CTPase activity"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA;IDA]
[GO:0030145 "manganese ion binding" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IEA;IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0008270 GO:GO:0006508 EMBL:U18997
GO:GO:0004222 GO:GO:0016887 GO:GO:0030145 GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0043273 EMBL:U01376
HOGENOM:HOG000217276 KO:K03798 EMBL:M83138 PIR:S35109
RefSeq:NP_417645.1 RefSeq:YP_491363.1 PDB:1LV7 PDBsum:1LV7
ProteinModelPortal:P0AAI3 SMR:P0AAI3 DIP:DIP-35828N IntAct:P0AAI3
MINT:MINT-1226643 MEROPS:M41.001 PaxDb:P0AAI3 PRIDE:P0AAI3
EnsemblBacteria:EBESCT00000000369 EnsemblBacteria:EBESCT00000000370
EnsemblBacteria:EBESCT00000017485 GeneID:12933986 GeneID:947690
KEGG:ecj:Y75_p3098 KEGG:eco:b3178 PATRIC:32121774 EchoBASE:EB1469
EcoGene:EG11506 OMA:RSIIDQC ProtClustDB:PRK10733
BioCyc:EcoCyc:EG11506-MONOMER BioCyc:ECOL316407:JW3145-MONOMER
BioCyc:MetaCyc:EG11506-MONOMER SABIO-RK:P0AAI3
EvolutionaryTrace:P0AAI3 Genevestigator:P0AAI3 Uniprot:P0AAI3
Length = 644
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 105/253 (41%), Positives = 160/253 (63%)
Query: 154 SRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPP 213
S+ + + D+ T + D+ G ++ +E+ E +V + RFQKLG + PKGVL+ GPP
Sbjct: 137 SKARMLTEDQIKTT-FADVAGCDEAKEEVAE-LVEYLREPSRFQKLGGKIPKGVLMVGPP 194
Query: 214 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEID 273
GTGKTL+A+A A + F ++G V+MF+G GA VRD F+ AK+ +PCIIFIDEID
Sbjct: 195 GTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEID 254
Query: 274 AIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLD 333
A+G +R G E ++T+ ++L ++DGF ++ I VIAATNR D+LDPAL+R GR D
Sbjct: 255 AVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFD 314
Query: 334 RKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 393
R++ P R +IL++H R++ + PD++ +AR T F+GA L + EA + A R
Sbjct: 315 RQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAAR 374
Query: 394 RDATEVNHEDFNE 406
+ V+ +F +
Sbjct: 375 GNKRVVSMVEFEK 387
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 509 (184.2 bits), Expect = 3.3e-48, P = 3.3e-48
Identities = 100/243 (41%), Positives = 156/243 (64%)
Query: 169 YNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQT 228
Y+DIGG KQ+ ++ E + LP+ H + F+ +G++PP+GVLLYGPPGTGKTLMARA A +T
Sbjct: 221 YDDIGGCRKQMAQIREMVELPLRHPQLFKSIGIKPPRGVLLYGPPGTGKTLMARAVANET 280
Query: 229 NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDR 288
A F + GP+++ G+ +R AF+ A++ SP IIFIDEID+I KR + +G+
Sbjct: 281 GAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKR--EKTNGEV 338
Query: 289 EVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARAR 348
E +R + +LL +DG + + V+AATNR + +DPAL R GR DR+++ P R
Sbjct: 339 E-RRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLE 397
Query: 349 ILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR--DATEVNHEDFNE 406
ILQIH++ M + DV+ E++A T + G+ + A+C EA M +R D +++ + +
Sbjct: 398 ILQIHTKNMKLGDDVDLEQIAAETHGYVGSDVAALCSEAAMQQIREKMDLIDLDEDTIDA 457
Query: 407 GII 409
++
Sbjct: 458 EVL 460
Score = 479 (173.7 bits), Expect = 6.6e-45, P = 6.6e-45
Identities = 103/269 (38%), Positives = 154/269 (57%)
Query: 133 DLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTH 192
D +GV +++ L S ++ + V E P + DIGGL++ Q+L E + P+ H
Sbjct: 461 DSLGVTMENFRF--ALGVSNPSALREVAVVEVPNVRWEDIGGLDEVKQDLREQVQYPVDH 518
Query: 193 KERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV 252
E+F K G+ P +GVL YGPPGTGKT++A+A A + A F+ + GP+L+ M+ G+ +
Sbjct: 519 PEKFLKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNI 578
Query: 253 RDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKV 312
RD F A+ +PCI+F+DE+D+I R S R + +LL ++DG +S + V
Sbjct: 579 RDIFDKARAAAPCIVFLDELDSIAKARGGSVGDAGGASDRVVNQLLTEMDGMTSKKNVFV 638
Query: 313 IAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARST 372
I ATNR + LDPAL R GRLD I P P E R IL+ RK V DV+ + +A T
Sbjct: 639 IGATNRPEQLDPALCRPGRLDSLIYVPLPDELGRLSILKAQLRKTPVSDDVDLQYIANKT 698
Query: 373 DDFNGAQLKAVCVEAGMLALRRDAT-EVN 400
F+GA L + A +A++ T ++N
Sbjct: 699 HGFSGADLGFITQRAVKIAIKESITADIN 727
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 100/243 (41%), Positives = 150/243 (61%)
Query: 161 VDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 220
V E P + DIGGLE +EL E + P+ H ++F K G+ P KGVL YGPPG GKTL+
Sbjct: 200 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 259
Query: 221 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 280
A+A A + A F+ + GP+L+ M+ G+ VR+ F A++ +PC++F DE+D+I R
Sbjct: 260 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 319
Query: 281 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPH 340
+ G R + ++L ++DG S+ + +I ATNR DI+DPA++R GRLD+ I P
Sbjct: 320 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 379
Query: 341 PTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA-TEV 399
P E++R IL+ + RK V DV+ + LA+ T+ F+GA L +C A LA+R +E+
Sbjct: 380 PDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIESEI 439
Query: 400 NHE 402
E
Sbjct: 440 RRE 442
Score = 300 (110.7 bits), Expect = 4.7e-26, P = 4.7e-26
Identities = 64/168 (38%), Positives = 100/168 (59%)
Query: 236 AGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTML 295
+GP+++ G+ +R AF+ A++ +P IIFIDE+DAI KR + G+ E +R +
Sbjct: 2 SGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-RRIVS 58
Query: 296 ELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSR 355
+LL +DG + V+AATNR + +DPAL R GR DR+++ P R ILQIH++
Sbjct: 59 QLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTK 118
Query: 356 KMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 403
M + DV+ E++ T GA L A+C EA + A+R+ ++ ED
Sbjct: 119 NMKLADDVDLEQVGNETHGHVGADLAALCSEAALQAIRKKMDLIDLED 166
>UNIPROTKB|Q2KJI7 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9913 "Bos
taurus" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0046872 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 MEROPS:M41.016
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:BC105322 IPI:IPI00686580 RefSeq:NP_001039676.1 UniGene:Bt.1657
HSSP:Q9WZ49 ProteinModelPortal:Q2KJI7 SMR:Q2KJI7 STRING:Q2KJI7
PRIDE:Q2KJI7 Ensembl:ENSBTAT00000031029 GeneID:515757
KEGG:bta:515757 CTD:10939 InParanoid:Q2KJI7 OMA:LYRFVTT
NextBio:20871990 GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
Uniprot:Q2KJI7
Length = 805
Score = 508 (183.9 bits), Expect = 3.8e-48, P = 3.8e-48
Identities = 105/265 (39%), Positives = 163/265 (61%)
Query: 151 EYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLY 210
E ++V E+D K + D+ G E+ E++E + + + +++Q LG + PKG +L
Sbjct: 294 ETTAKVLKDEIDVK----FKDVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAILT 348
Query: 211 GPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFID 270
GPPGTGKTL+A+A A + N F+ ++G + ++MF+G G VRD F LA++ +PCI+FID
Sbjct: 349 GPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFID 408
Query: 271 EIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSG 330
EIDA+G KR G E + T+ +LL ++DGF++ + ++A TNR DILDPALMR G
Sbjct: 409 EIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPG 468
Query: 331 RLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARS----TDDFNGAQLKAVCVE 386
R DR+I P + RA I ++H R + + + E+LAR T F+GA + VC E
Sbjct: 469 RFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKEKLARKLASLTPGFSGADVANVCNE 528
Query: 387 AGMLALRRDATEVNHEDFNEGIIQV 411
A ++A R + +N + F + I +V
Sbjct: 529 AALIAARHLSDSINQKHFEQAIERV 553
>UNIPROTKB|E2QYF3 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060013 "righting reflex" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0042407 "cristae
formation" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
EMBL:AAEX03005521 RefSeq:XP_547682.2 ProteinModelPortal:E2QYF3
Ensembl:ENSCAFT00000029872 GeneID:490560 KEGG:cfa:490560
Uniprot:E2QYF3
Length = 806
Score = 507 (183.5 bits), Expect = 4.9e-48, P = 4.9e-48
Identities = 105/265 (39%), Positives = 163/265 (61%)
Query: 151 EYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLY 210
E ++V E+D K + D+ G E+ E++E + + + +++Q LG + PKG +L
Sbjct: 294 ETTAKVLKDEIDVK----FKDVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAILT 348
Query: 211 GPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFID 270
GPPGTGKTL+A+A A + N F+ ++G + ++MF+G G VRD F LA++ +PCI+FID
Sbjct: 349 GPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFID 408
Query: 271 EIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSG 330
EIDA+G KR G E + T+ +LL ++DGF++ + ++A TNR DILDPALMR G
Sbjct: 409 EIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPG 468
Query: 331 RLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARS----TDDFNGAQLKAVCVE 386
R DR+I P + RA I ++H R + + + E+LAR T F+GA + VC E
Sbjct: 469 RFDRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKEKLARKLASLTPGFSGADVANVCNE 528
Query: 387 AGMLALRRDATEVNHEDFNEGIIQV 411
A ++A R + +N + F + I +V
Sbjct: 529 AALIAARHLSDSINQKHFEQAIERV 553
>DICTYBASE|DDB_G0272120 [details] [associations]
symbol:rcaA "peptidase M41, FtsH domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0272120 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GenomeReviews:CM000151_GR GO:GO:0004222
EMBL:AAFI02000008 GO:GO:0030163 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 ProtClustDB:CLSZ2846729 RefSeq:XP_645267.1
ProteinModelPortal:Q75JS8 SMR:Q75JS8 STRING:Q75JS8
EnsemblProtists:DDB0185211 GeneID:8618433 KEGG:ddi:DDB_G0272120
InParanoid:Q75JS8 OMA:ERTIVAH Uniprot:Q75JS8
Length = 844
Score = 508 (183.9 bits), Expect = 5.1e-48, P = 5.1e-48
Identities = 122/343 (35%), Positives = 186/343 (54%)
Query: 82 MNPED-----EAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLV- 135
++PED + ++D I L+ Q V T L + + P L G L+
Sbjct: 268 ISPEDFQRKLQEDQDALGIPLNKQ------VFATFNHTNKILRELVAISPTLLMIGLLIY 321
Query: 136 ---GVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTH 192
G+N + S + S+ KA++ T + D+ G+++ +E++E + +
Sbjct: 322 FSRGINSS---LTKGASSLFKSKSKAVKATSTTT--FKDVAGMDEAKEEIMEFVSF-LKD 375
Query: 193 KERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV 252
R++KLG R PKG +L GPPGTGKTL+A+A A + F ++G ++MF+G G V
Sbjct: 376 PSRYKKLGARIPKGAILSGPPGTGKTLLAKATAGEAGVNFYTISGSDFIEMFVGVGPSRV 435
Query: 253 RDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKV 312
RD F+ A+ +PCI+FIDEIDA+G R D E + T+ +LL ++DGFSS + V
Sbjct: 436 RDLFKEARANTPCIVFIDEIDAVGRARSRGGFHND-ERENTLNQLLVEMDGFSSTSGVVV 494
Query: 313 IAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARS- 371
A TNR+D+LDPAL+R GR DR+I P + R I +H + N+ D EE+A+
Sbjct: 495 FAGTNRSDVLDPALLRPGRFDRQIYVGKPDIKGRKDIFMVHLK--NIKLDGEMEEIAKKL 552
Query: 372 ---TDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV 411
T F+GA + VC E ++A R+DAT N + F E I +V
Sbjct: 553 ATLTPGFSGADIANVCNEGALVAARKDATSANFDHFEEAIERV 595
>UNIPROTKB|Q9KU86 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241 HSSP:P28691
KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299 RefSeq:NP_230286.1
ProteinModelPortal:Q9KU86 SMR:Q9KU86 DNASU:2615425 GeneID:2615425
KEGG:vch:VC0637 PATRIC:20080383 ProtClustDB:CLSK874054
Uniprot:Q9KU86
Length = 651
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 107/251 (42%), Positives = 157/251 (62%)
Query: 154 SRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPP 213
S+ + M D+ T ++D+ G + + +E V+ +V + RFQKLG + P GVL+ GPP
Sbjct: 141 SKARMMSEDQIKTT-FSDVAGCD-EAKEDVKELVDYLRDPSRFQKLGGKIPTGVLMVGPP 198
Query: 214 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEID 273
GTGKTL+A+A A + F ++G V+MF+G GA VRD F+ AK+ SPCIIFIDEID
Sbjct: 199 GTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEID 258
Query: 274 AIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLD 333
A+G +R G E ++T+ ++L ++DGF ++ I VIAATNR D+LDPAL+R GR D
Sbjct: 259 AVGRQRGAGVGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFD 318
Query: 334 RKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 393
R++ P R +IL++H RK+ + DV +AR T F+GA L + EA + A R
Sbjct: 319 RQVVVGLPDVRGREQILKVHMRKVPLANDVEPSLIARGTPGFSGADLANLVNEAALFAAR 378
Query: 394 RDATEVNHEDF 404
+ V+ +F
Sbjct: 379 GNKRNVSMVEF 389
>TIGR_CMR|VC_0637 [details] [associations]
symbol:VC_0637 "cell division protein FtsH" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0000910 "cytokinesis"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299
RefSeq:NP_230286.1 ProteinModelPortal:Q9KU86 SMR:Q9KU86
DNASU:2615425 GeneID:2615425 KEGG:vch:VC0637 PATRIC:20080383
ProtClustDB:CLSK874054 Uniprot:Q9KU86
Length = 651
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 107/251 (42%), Positives = 157/251 (62%)
Query: 154 SRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPP 213
S+ + M D+ T ++D+ G + + +E V+ +V + RFQKLG + P GVL+ GPP
Sbjct: 141 SKARMMSEDQIKTT-FSDVAGCD-EAKEDVKELVDYLRDPSRFQKLGGKIPTGVLMVGPP 198
Query: 214 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEID 273
GTGKTL+A+A A + F ++G V+MF+G GA VRD F+ AK+ SPCIIFIDEID
Sbjct: 199 GTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEID 258
Query: 274 AIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLD 333
A+G +R G E ++T+ ++L ++DGF ++ I VIAATNR D+LDPAL+R GR D
Sbjct: 259 AVGRQRGAGVGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFD 318
Query: 334 RKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 393
R++ P R +IL++H RK+ + DV +AR T F+GA L + EA + A R
Sbjct: 319 RQVVVGLPDVRGREQILKVHMRKVPLANDVEPSLIARGTPGFSGADLANLVNEAALFAAR 378
Query: 394 RDATEVNHEDF 404
+ V+ +F
Sbjct: 379 GNKRNVSMVEF 389
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 507 (183.5 bits), Expect = 6.1e-48, P = 6.1e-48
Identities = 104/281 (37%), Positives = 170/281 (60%)
Query: 134 LVGVNKDSYLIL--DTLPSEYDSRVKAMEVDEKPTE-DYNDIGGLEKQIQELVEAIVLPM 190
+V V + Y ++ DT+ + + + E Y+DIGG KQ+ ++ E + LP+
Sbjct: 175 VVDVEPEEYAVVAQDTIIHWEGEPINREDEENNMNEVGYDDIGGCRKQMAQIREMVELPL 234
Query: 191 THKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAK 250
H + F+ +G++PP+GVL+YGPPGTGKTLMARA A +T A F + GP+++ G+
Sbjct: 235 RHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVANETGAFFFLINGPEVMSKMAGESES 294
Query: 251 LVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRI 310
+R AF+ A++ +P IIFIDEID+I KR + +G+ E +R + +LL +DG + +
Sbjct: 295 NLRKAFEEAEKNAPAIIFIDEIDSIAPKR--DKTNGEVE-RRVVSQLLTLMDGMKARSNV 351
Query: 311 KVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELAR 370
VIAATNR + +DPAL R GR DR+++ P R +L+IH++ M + DV+ E LA
Sbjct: 352 VVIAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEVLRIHTKNMKLADDVDLEALAA 411
Query: 371 STDDFNGAQLKAVCVEAGMLALRR--DATEVNHEDFNEGII 409
T + GA + ++C EA M +R D +++ ++ + ++
Sbjct: 412 ETHGYVGADIASLCSEAAMQQIREKMDLIDLDEDEIDAEVL 452
Score = 473 (171.6 bits), Expect = 3.2e-44, P = 3.2e-44
Identities = 99/282 (35%), Positives = 162/282 (57%)
Query: 133 DLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTH 192
D +GV D++ L + S ++ V E ++D+GGL++ +EL E + P+ H
Sbjct: 453 DSLGVTMDNFRF--ALGNSNPSALRETVV-ESVNVTWDDVGGLDEIKEELKETVEYPVLH 509
Query: 193 KERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV 252
+++ K G+ P KGVL YGPPGTGKTL+A+A A + +A F+ + GP+L+ M+ G+ +
Sbjct: 510 PDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNI 569
Query: 253 RDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKV 312
RD F A+ +P ++F+DE+D+I R S R + +LL ++DG ++ + V
Sbjct: 570 RDIFDKARAAAPTVVFLDELDSIAKARGGSLGDAGGASDRVVNQLLTEMDGMNAKKNVFV 629
Query: 313 IAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARST 372
I ATNR D +DPA++R GRLD+ I P P E AR IL RK + P + +A++T
Sbjct: 630 IGATNRPDQIDPAILRPGRLDQLIYVPLPDENARLSILNAQLRKTPLEPGLELTAIAKAT 689
Query: 373 DDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAK 414
F+GA L + A A++ D+ E + + E ++V+ +
Sbjct: 690 QGFSGADLLYIVQRAAKYAIK-DSIEAHRQHEAEKEVKVEGE 730
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 506 (183.2 bits), Expect = 6.3e-48, P = 6.3e-48
Identities = 104/246 (42%), Positives = 155/246 (63%)
Query: 160 EVDEKPTED--YNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGK 217
E +E+ D Y+DIGG KQ+ ++ E + LP+ H F+ +GV+PP+G+LLYGPPGTGK
Sbjct: 194 EDEEESLNDIGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGK 253
Query: 218 TLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGT 277
TL+ARA A +T A F + GP+++ G+ +R AF+ A++ +P IIFIDE+DAI
Sbjct: 254 TLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAP 313
Query: 278 KRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIE 337
KR + G+ E +R + +LL +DG + V+AATNR + +D AL R GR DR+I+
Sbjct: 314 KR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHVVVMAATNRPNSVDAALRRFGRFDREID 370
Query: 338 FPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDAT 397
P R ILQIH++ M + DV+ E+++ T GA L A+C EA + A+R+ T
Sbjct: 371 IGIPDSTGRLEILQIHTKNMKLSEDVDLEQISAETHGHVGADLAALCSEAALQAIRKKMT 430
Query: 398 EVNHED 403
++ ED
Sbjct: 431 LIDLED 436
Score = 474 (171.9 bits), Expect = 2.1e-44, P = 2.1e-44
Identities = 101/260 (38%), Positives = 157/260 (60%)
Query: 161 VDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 220
V E P ++ DIGGL++ +EL E + P+ + ++F K G+ P +GVL YGPPG GKTL+
Sbjct: 470 VVEVPHVNWEDIGGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLL 529
Query: 221 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 280
A+A A + A F+ + GP+L+ M+ G+ VRD F A++ +PCI+F DE+D+I R
Sbjct: 530 AKAIANECQANFVSIKGPELLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKARG 589
Query: 281 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPH 340
R + ++L ++DG ++ + +I ATNR DI+DPA++R GRLD+ I P
Sbjct: 590 GGAGDAGGAADRVINQILTEMDGMTNKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 649
Query: 341 PTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVN 400
P +R IL+ + RK V DV+ L++ T+ F+GA L +C A LA+R +A E
Sbjct: 650 PDMPSRTAILRANLRKSPVAKDVDLMYLSKITEGFSGADLTEICQRACKLAIR-EAIEA- 707
Query: 401 HEDFNEGIIQVQAKKKASLN 420
E E Q QA+K+ +++
Sbjct: 708 -EIRAER--QRQARKETAMD 724
>TIGR_CMR|SO_1197 [details] [associations]
symbol:SO_1197 "ATP-dependent metalloprotease FtsH"
species:211586 "Shewanella oneidensis MR-1" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051301 "cell division" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006200
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
OMA:RSIIDQC RefSeq:NP_716822.2 ProteinModelPortal:Q8EHM2 SMR:Q8EHM2
GeneID:1169025 KEGG:son:SO_1197 PATRIC:23522048
ProtClustDB:CLSK906146 Uniprot:Q8EHM2
Length = 652
Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
Identities = 107/251 (42%), Positives = 156/251 (62%)
Query: 154 SRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPP 213
S+ K M D+ T + D+ G ++ +E+ E +V + +FQKLG R P GVL+ GPP
Sbjct: 142 SKAKLMSEDQIKTT-FADVAGCDEAKEEVKE-LVDYLRDPTKFQKLGGRIPTGVLMVGPP 199
Query: 214 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEID 273
GTGKTL+A+A A ++ F ++G V+MF+G GA VRD F+ AK+ +PCIIFIDEID
Sbjct: 200 GTGKTLLAKAIAGESKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKSAPCIIFIDEID 259
Query: 274 AIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLD 333
A+G +R G E ++T+ ++L ++DGF ++ I VIAATNR D+LD AL+R GR D
Sbjct: 260 AVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDSALLRPGRFD 319
Query: 334 RKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 393
R++ P R +IL++H RK+ + DV +AR T F+GA L + EA + A R
Sbjct: 320 RQVVVGLPDVRGREQILKVHMRKVPLSEDVKASVIARGTPGFSGADLANLVNEAALFAAR 379
Query: 394 RDATEVNHEDF 404
+ V E+F
Sbjct: 380 GNRRVVGMEEF 390
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 505 (182.8 bits), Expect = 7.9e-48, P = 7.9e-48
Identities = 102/249 (40%), Positives = 154/249 (61%)
Query: 156 VKAMEVDEKPTE-DYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPG 214
+K E +E Y+DIGG KQ+ ++ E + LP+ H F+ +GV+PP+G+L+YGPPG
Sbjct: 186 IKREEEEESLNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPG 245
Query: 215 TGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDA 274
TGKTL+ARA A +T A F + GP+++ G+ +R AF+ A++ SP IIFIDEIDA
Sbjct: 246 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDA 305
Query: 275 IGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDR 334
I KR + G+ E +R + +LL +DG + V+AATNR + +DPAL R GR DR
Sbjct: 306 IAPKR--DKTHGEVE-RRIVSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFGRFDR 362
Query: 335 KIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 394
+I+ P R +L+IH++ M +H DV+ E++A + GA L ++C EA + +R
Sbjct: 363 EIDIGIPDATGRLEVLRIHTKNMKLHDDVDLEQIAAESHGHVGADLASLCSEAALQQIRE 422
Query: 395 DATEVNHED 403
++ ED
Sbjct: 423 KMDLIDLED 431
Score = 478 (173.3 bits), Expect = 7.5e-45, P = 7.5e-45
Identities = 94/243 (38%), Positives = 146/243 (60%)
Query: 161 VDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 220
V E P + DIGGLE +EL E + P+ H ++F K G++P +GVL YGPPG GKTL+
Sbjct: 465 VVEVPNTTWTDIGGLESVKKELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLL 524
Query: 221 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 280
A+A A + A F+ + GP+L+ M+ G+ VRD F A+ +PC++F DE+D+I R
Sbjct: 525 AKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKARG 584
Query: 281 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPH 340
+ R + ++L ++DG + + +I ATNR DI+DPA++R GRLD+ I P
Sbjct: 585 GNVGDAGGAADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 644
Query: 341 PTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA-TEV 399
P +++R IL+ + RK + +V+ +A+ T F+GA L +C A LA+R+ E+
Sbjct: 645 PDDKSREAILKANLRKSPLAKEVDLTYIAKVTQGFSGADLTEICQRACKLAIRQAIEAEI 704
Query: 400 NHE 402
E
Sbjct: 705 RRE 707
>UNIPROTKB|F1N9N5 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
OMA:LYRFVTT EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00683486 Ensembl:ENSGALT00000016639 ArrayExpress:F1N9N5
Uniprot:F1N9N5
Length = 635
Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 103/265 (38%), Positives = 162/265 (61%)
Query: 151 EYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLY 210
E ++V E+D K + D+ G E+ E++E + + + ++++ LG + PKG +L
Sbjct: 137 ETTAKVLKDEIDVK----FKDVAGCEEAKLEIMEFVNF-LKNPKQYEDLGAKIPKGAILT 191
Query: 211 GPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFID 270
GPPGTGKTL+A+A A + N F+ + G + ++MF+G G VRD F LA++ +PCI+FID
Sbjct: 192 GPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDLFALARKNAPCILFID 251
Query: 271 EIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSG 330
EIDA+G KR G E + T+ +LL ++DGF++ + ++A TNR DILDPALMR G
Sbjct: 252 EIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPG 311
Query: 331 RLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARS----TDDFNGAQLKAVCVE 386
R DR+I P + RA I ++H R + + ++ + LAR T F+GA + VC E
Sbjct: 312 RFDRQIYIGPPDIKGRASIFKVHLRPLKLDTVLDKDNLARKLASLTPGFSGADIANVCNE 371
Query: 387 AGMLALRRDATEVNHEDFNEGIIQV 411
A ++A R + +N + F + I +V
Sbjct: 372 AALIAARHLSDAINQKHFEQAIERV 396
>UNIPROTKB|I3LLQ8 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0006508 GO:GO:0040014 GO:GO:0004222 GO:GO:0042552
GO:GO:0007409 GO:GO:0030163 GeneTree:ENSGT00530000063070
GO:GO:0017111 GO:GO:0042407 GO:GO:0008053 GO:GO:0034982
TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675
GO:GO:0060013 EMBL:FP565334 Ensembl:ENSSSCT00000025900
Uniprot:I3LLQ8
Length = 597
Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 104/266 (39%), Positives = 163/266 (61%)
Query: 151 EYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVR-PPKGVLL 209
E ++V E+D K + D+ G E+ E++E + + + +++Q LG + P KG +L
Sbjct: 84 ETTAKVLKDEIDVK----FKDVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKKGAIL 138
Query: 210 YGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFI 269
GPPGTGKTL+A+A A + N F+ ++G + ++MF+G G VRD F LA++ +PCI+FI
Sbjct: 139 TGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFI 198
Query: 270 DEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRS 329
DEIDA+G KR G E + T+ +LL ++DGF++ + ++A TNR DILDPAL+R
Sbjct: 199 DEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRP 258
Query: 330 GRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARS----TDDFNGAQLKAVCV 385
GR DR+I P + RA I ++H R + + + E+LAR T F+GA + VC
Sbjct: 259 GRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKEKLARKLASLTPGFSGADVANVCN 318
Query: 386 EAGMLALRRDATEVNHEDFNEGIIQV 411
EA ++A R + +N + F + I +V
Sbjct: 319 EAALIAARHLSDSINQKHFEQAIERV 344
>TIGR_CMR|CBU_1352 [details] [associations]
symbol:CBU_1352 "ATP-dependent metalloprotease FtsH"
species:227377 "Coxiella burnetii RSA 493" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HSSP:P28691 HOGENOM:HOG000217276 KO:K03798
MEROPS:M41.001 OMA:RSIIDQC RefSeq:NP_820341.1
ProteinModelPortal:Q83BY5 SMR:Q83BY5 PRIDE:Q83BY5 GeneID:1209258
KEGG:cbu:CBU_1352 PATRIC:17931447 ProtClustDB:CLSK914722
BioCyc:CBUR227377:GJ7S-1342-MONOMER Uniprot:Q83BY5
Length = 647
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 104/252 (41%), Positives = 157/252 (62%)
Query: 154 SRVKAMEVDE-KPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGP 212
S+ + + D+ K T ++D+ G+++ +E+ E + + +FQ+LG + P GVLL GP
Sbjct: 141 SKARLLSQDQVKVT--FDDVAGVDEAKEEVKELVEF-LRDPGKFQRLGGKMPCGVLLVGP 197
Query: 213 PGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEI 272
PGTGKTL+A+A A + F ++G V+MF+G GA VRD F AK+++PCIIFIDEI
Sbjct: 198 PGTGKTLLAKAVAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFDQAKKQAPCIIFIDEI 257
Query: 273 DAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRL 332
DA+G R G E ++T+ +LL ++DGF + I V+AATNR D+LDPAL+R GR
Sbjct: 258 DAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFEGKEGIIVMAATNRPDVLDPALLRPGRF 317
Query: 333 DRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLAL 392
DR++ P P + R IL++H K+ + DV +AR T F+GA L + EA + A
Sbjct: 318 DRQVVVPLPDIKGREYILKVHMNKLPLAKDVKASVIARGTPGFSGADLANIVNEAALFAA 377
Query: 393 RRDATEVNHEDF 404
R + +V+ +F
Sbjct: 378 RENKKDVSMSEF 389
>TIGR_CMR|CPS_3452 [details] [associations]
symbol:CPS_3452 "ATP-dependent metalloprotease FtsH"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 OMA:RSIIDQC
RefSeq:YP_270126.1 ProteinModelPortal:Q47YJ4 SMR:Q47YJ4
STRING:Q47YJ4 GeneID:3519317 KEGG:cps:CPS_3452 PATRIC:21469851
BioCyc:CPSY167879:GI48-3480-MONOMER Uniprot:Q47YJ4
Length = 660
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 104/250 (41%), Positives = 157/250 (62%)
Query: 157 KAMEVDEKPTED-YNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGT 215
KA ++ E+ + + D+ G ++ +++ E +V + RFQKLG R P G+LL G PGT
Sbjct: 140 KARQLSEEQIKTTFADVAGCDEAKEDVAE-LVDYLREPSRFQKLGGRIPSGILLVGQPGT 198
Query: 216 GKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAI 275
GKTL+A+A A + F ++G V+MF+G GA VRD F+ AK+ +PCIIFIDEIDA+
Sbjct: 199 GKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAV 258
Query: 276 GTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRK 335
G +R G E ++T+ ++L ++DGF ++ + VIAATNR D+LDPAL+R GR DR+
Sbjct: 259 GRQRGAGMGGGHDEREQTLNQMLVEMDGFEGNEGVIVIAATNRPDVLDPALLRPGRFDRQ 318
Query: 336 IEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD 395
+ P R +IL++H RK+ + DV E +AR T F+GA L + EA + A R
Sbjct: 319 VTVGLPDIRGREQILKVHMRKVPLGDDVKAEVIARGTPGFSGADLANLVNEAALCAARTA 378
Query: 396 ATEVNHEDFN 405
V+ ++F+
Sbjct: 379 RRVVSMKEFD 388
>UNIPROTKB|Q9Y4W6 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9606 "Homo
sapiens" [GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0021675 "nerve
development" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0051082 "unfolded protein binding" evidence=TAS]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0008219 DrugBank:DB00171 GO:GO:0007528 GO:GO:0051082
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 eggNOG:COG0465
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 GO:GO:0021675 GO:GO:0060013 EMBL:Y18314 EMBL:BC065016
IPI:IPI00001091 RefSeq:NP_006787.2 UniGene:Hs.726355 PDB:2LNA
PDBsum:2LNA ProteinModelPortal:Q9Y4W6 SMR:Q9Y4W6 IntAct:Q9Y4W6
MINT:MINT-1161944 STRING:Q9Y4W6 MEROPS:M41.007 PhosphoSite:Q9Y4W6
DMDM:126302516 PaxDb:Q9Y4W6 PeptideAtlas:Q9Y4W6 PRIDE:Q9Y4W6
Ensembl:ENST00000269143 GeneID:10939 KEGG:hsa:10939 UCSC:uc002kqz.2
GeneCards:GC18M012328 H-InvDB:HIX0027367 HGNC:HGNC:315
HPA:HPA004479 HPA:HPA004480 MIM:604581 MIM:610246 MIM:614487
neXtProt:NX_Q9Y4W6 Orphanet:101109 PharmGKB:PA24612
InParanoid:Q9Y4W6 PhylomeDB:Q9Y4W6 GenomeRNAi:10939 NextBio:41551
ArrayExpress:Q9Y4W6 Bgee:Q9Y4W6 CleanEx:HS_AFG3L2
Genevestigator:Q9Y4W6 GermOnline:ENSG00000141385 Uniprot:Q9Y4W6
Length = 797
Score = 502 (181.8 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 103/265 (38%), Positives = 163/265 (61%)
Query: 151 EYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLY 210
E ++V E+D K + D+ G E+ E++E + + + +++Q LG + PKG +L
Sbjct: 293 ETTAKVLKDEIDVK----FKDVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAILT 347
Query: 211 GPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFID 270
GPPGTGKTL+A+A A + N F+ ++G + ++MF+G G VRD F LA++ +PCI+FID
Sbjct: 348 GPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFID 407
Query: 271 EIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSG 330
EIDA+G KR G E + T+ +LL ++DGF++ + ++A TNR DILDPAL+R G
Sbjct: 408 EIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPG 467
Query: 331 RLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARS----TDDFNGAQLKAVCVE 386
R DR+I P + RA I ++H R + + + ++LAR T F+GA + VC E
Sbjct: 468 RFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGADVANVCNE 527
Query: 387 AGMLALRRDATEVNHEDFNEGIIQV 411
A ++A R + +N + F + I +V
Sbjct: 528 AALIAARHLSDSINQKHFEQAIERV 552
>TIGR_CMR|CJE_1259 [details] [associations]
symbol:CJE_1259 "cell division protein FtsH"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
OMA:RARASMP RefSeq:YP_179247.1 ProteinModelPortal:Q5HTY8 SMR:Q5HTY8
STRING:Q5HTY8 GeneID:3231766 KEGG:cjr:CJE1259 PATRIC:20044314
ProtClustDB:CLSK872348 BioCyc:CJEJ195099:GJC0-1285-MONOMER
Uniprot:Q5HTY8
Length = 645
Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
Identities = 108/269 (40%), Positives = 165/269 (61%)
Query: 157 KAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTG 216
K + EKP ++D+ G+E+ +E+ E IV + + ER+ KLG + PKG+LL GPPGTG
Sbjct: 165 KKLVNSEKPKVKFSDVAGVEEAKEEVKE-IVDFLKYPERYIKLGAKIPKGLLLVGPPGTG 223
Query: 217 KTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIG 276
KTL+A+A A + + F ++G ++MF+G GA VRD F+ AK+++P I+FIDEIDAIG
Sbjct: 224 KTLLAKAVAGEADVPFFSVSGSSFIEMFVGVGASRVRDLFENAKKEAPAIVFIDEIDAIG 283
Query: 277 TKRFDSEV-SGDREVQRTMLELLNQLDGFSSDDR-IKVIAATNRADILDPALMRSGRLDR 334
R S + G+ E ++T+ +LL ++DGF ++ + V+AATNR ++LD AL+R GR DR
Sbjct: 284 KSRAASGMMGGNDEREQTLNQLLAEMDGFGTESSPVIVLAATNRPEVLDAALLRPGRFDR 343
Query: 335 KIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 394
++ P + R IL++H + + + P V E++AR T GA L + EA +LA R
Sbjct: 344 QVLVDKPDFKGRCDILKVHMKDVKISPKVKVEDIARLTAGLAGADLANIINEAALLAGRD 403
Query: 395 DATEVNHEDFNEGIIQVQA---KKKASLN 420
V D E + + A KK +N
Sbjct: 404 SKKYVEQNDLVEAVERAIAGLEKKSRRIN 432
>MGI|MGI:1916847 [details] [associations]
symbol:Afg3l2 "AFG3(ATPase family gene 3)-like 2 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IGI] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0008053 "mitochondrial fusion"
evidence=IGI] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016265 "death" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0021675 "nerve development" evidence=IMP]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IGI] [GO:0040014
"regulation of multicellular organism growth" evidence=IMP]
[GO:0042407 "cristae formation" evidence=IGI] [GO:0042552
"myelination" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048747 "muscle fiber development" evidence=IMP]
[GO:0060013 "righting reflex" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1916847
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
MEROPS:M41.007 EMBL:BC036999 EMBL:BC043056 IPI:IPI00170357
RefSeq:NP_081406.1 UniGene:Mm.426052 ProteinModelPortal:Q8JZQ2
SMR:Q8JZQ2 IntAct:Q8JZQ2 STRING:Q8JZQ2 PhosphoSite:Q8JZQ2
PaxDb:Q8JZQ2 PRIDE:Q8JZQ2 Ensembl:ENSMUST00000025408 GeneID:69597
KEGG:mmu:69597 UCSC:uc008fmf.1 InParanoid:Q8JZQ2 NextBio:329880
Bgee:Q8JZQ2 CleanEx:MM_AFG3L2 Genevestigator:Q8JZQ2
GermOnline:ENSMUSG00000024527 Uniprot:Q8JZQ2
Length = 802
Score = 500 (181.1 bits), Expect = 2.8e-47, P = 2.8e-47
Identities = 103/265 (38%), Positives = 163/265 (61%)
Query: 151 EYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLY 210
E ++V E+D K + D+ G E+ E++E + + + +++Q LG + PKG +L
Sbjct: 292 ETTAKVLKDEIDVK----FKDVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAILT 346
Query: 211 GPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFID 270
GPPGTGKTL+A+A A + N F+ ++G + ++MF+G G VRD F LA++ +PCI+FID
Sbjct: 347 GPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFID 406
Query: 271 EIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSG 330
EIDA+G KR G E + T+ +LL ++DGF++ + ++A TNR DILDPAL+R G
Sbjct: 407 EIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPG 466
Query: 331 RLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARS----TDDFNGAQLKAVCVE 386
R DR+I P + RA I ++H R + + + ++LAR T F+GA + VC E
Sbjct: 467 RFDRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNE 526
Query: 387 AGMLALRRDATEVNHEDFNEGIIQV 411
A ++A R + +N + F + I +V
Sbjct: 527 AALIAARHLSDAINEKHFEQAIERV 551
>UNIPROTKB|F1LN92 [details] [associations]
symbol:Afg3l2 "Protein Afg3l2" species:10116 "Rattus
norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016265 "death" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0021675 "nerve development" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1305259
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
IPI:IPI00192903 RefSeq:NP_001128336.1 UniGene:Rn.8386
ProteinModelPortal:F1LN92 PRIDE:F1LN92 Ensembl:ENSRNOT00000024632
GeneID:307350 KEGG:rno:307350 NextBio:657254 ArrayExpress:F1LN92
Uniprot:F1LN92
Length = 802
Score = 500 (181.1 bits), Expect = 2.8e-47, P = 2.8e-47
Identities = 103/265 (38%), Positives = 163/265 (61%)
Query: 151 EYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLY 210
E ++V E+D K + D+ G E+ E++E + + + +++Q LG + PKG +L
Sbjct: 292 ETTAKVLKDEIDVK----FKDVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAILT 346
Query: 211 GPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFID 270
GPPGTGKTL+A+A A + N F+ ++G + ++MF+G G VRD F LA++ +PCI+FID
Sbjct: 347 GPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFID 406
Query: 271 EIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSG 330
EIDA+G KR G E + T+ +LL ++DGF++ + ++A TNR DILDPAL+R G
Sbjct: 407 EIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPG 466
Query: 331 RLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARS----TDDFNGAQLKAVCVE 386
R DR+I P + RA I ++H R + + + ++LAR T F+GA + VC E
Sbjct: 467 RFDRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNE 526
Query: 387 AGMLALRRDATEVNHEDFNEGIIQV 411
A ++A R + +N + F + I +V
Sbjct: 527 AALIAARHLSDAINEKHFEQAIERV 551
>GENEDB_PFALCIPARUM|PF07_0047 [details] [associations]
symbol:PF07_0047 "cell division cycle ATPase,
putative" species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0016887 GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 PANTHER:PTHR23077:SF18
SMART:SM01073 EMBL:AL844506 EMBL:M96757 RefSeq:XP_001349023.1
ProteinModelPortal:P46468 IntAct:P46468 MINT:MINT-1593477
PRIDE:P46468 EnsemblProtists:PF07_0047:mRNA GeneID:2655095
KEGG:pfa:PF07_0047 EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 506 (183.2 bits), Expect = 2.9e-47, P = 2.9e-47
Identities = 110/273 (40%), Positives = 168/273 (61%)
Query: 147 TLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKG 206
TL EY R E ++ T Y D+GG++KQ+ ++ E I LP+ + E F +G+ PKG
Sbjct: 506 TLAEEYLKREDYEENNDDIT--YEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKG 563
Query: 207 VLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCI 266
VL++G PGTGKT +A+A A ++NA + GP+++ IG+ + +R F+ A EK+PCI
Sbjct: 564 VLMHGIPGTGKTSIAKAIANESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCI 623
Query: 267 IFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPAL 326
IFIDEID+I KR S+ + + E +R + +LL +DG ++ + V+AATNR + +DPAL
Sbjct: 624 IFIDEIDSIANKR--SKSNNELE-KRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPAL 680
Query: 327 MRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVE 386
R GR DR+IE P P E+ R IL ++KM + PDVN ++A+ + GA L +C E
Sbjct: 681 RRFGRFDREIEIPVPDEQGRYEILLTKTKKMKLDPDVNLRKIAKECHGYVGADLAQLCFE 740
Query: 387 AGMLALRRDA--TEVNHEDFNEGI-IQVQAKKK 416
A + ++ +++ EDF E + I V KK
Sbjct: 741 AAIQCIKEHIHFLDLDEEDFIEFMKISVDEDKK 773
Score = 437 (158.9 bits), Expect = 6.9e-40, P = 6.9e-40
Identities = 89/223 (39%), Positives = 136/223 (60%)
Query: 165 PTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARAC 224
PT +NDIGG+ + ++L E I+ P+ +K + K KG+LLYGPPG GKTL+A+A
Sbjct: 929 PTVTWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAI 988
Query: 225 AAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEV 284
A + A F+ + GP+L+ M+ G+ VRD F A+ SPCIIF DEID++ +R +S
Sbjct: 989 ANECKANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKER-NSNT 1047
Query: 285 SGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEE 344
+ D R + ++L ++DG + I +IAATNR DILD AL R GRLD+ I P +
Sbjct: 1048 NNDAS-DRVINQILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDLK 1106
Query: 345 ARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEA 387
+R I + + ++ DV+ ++A+ T+ F+GA + +C A
Sbjct: 1107 SRYSIFKAILKNTPLNEDVDIHDMAKRTEGFSGADITNLCQSA 1149
>UNIPROTKB|P46468 [details] [associations]
symbol:PF07_0047 "Putative cell division cycle ATPase"
species:36329 "Plasmodium falciparum 3D7" [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016887
GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 PANTHER:PTHR23077:SF18 SMART:SM01073 EMBL:AL844506
EMBL:M96757 RefSeq:XP_001349023.1 ProteinModelPortal:P46468
IntAct:P46468 MINT:MINT-1593477 PRIDE:P46468
EnsemblProtists:PF07_0047:mRNA GeneID:2655095 KEGG:pfa:PF07_0047
EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 506 (183.2 bits), Expect = 2.9e-47, P = 2.9e-47
Identities = 110/273 (40%), Positives = 168/273 (61%)
Query: 147 TLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKG 206
TL EY R E ++ T Y D+GG++KQ+ ++ E I LP+ + E F +G+ PKG
Sbjct: 506 TLAEEYLKREDYEENNDDIT--YEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKG 563
Query: 207 VLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCI 266
VL++G PGTGKT +A+A A ++NA + GP+++ IG+ + +R F+ A EK+PCI
Sbjct: 564 VLMHGIPGTGKTSIAKAIANESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCI 623
Query: 267 IFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPAL 326
IFIDEID+I KR S+ + + E +R + +LL +DG ++ + V+AATNR + +DPAL
Sbjct: 624 IFIDEIDSIANKR--SKSNNELE-KRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPAL 680
Query: 327 MRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVE 386
R GR DR+IE P P E+ R IL ++KM + PDVN ++A+ + GA L +C E
Sbjct: 681 RRFGRFDREIEIPVPDEQGRYEILLTKTKKMKLDPDVNLRKIAKECHGYVGADLAQLCFE 740
Query: 387 AGMLALRRDA--TEVNHEDFNEGI-IQVQAKKK 416
A + ++ +++ EDF E + I V KK
Sbjct: 741 AAIQCIKEHIHFLDLDEEDFIEFMKISVDEDKK 773
Score = 437 (158.9 bits), Expect = 6.9e-40, P = 6.9e-40
Identities = 89/223 (39%), Positives = 136/223 (60%)
Query: 165 PTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARAC 224
PT +NDIGG+ + ++L E I+ P+ +K + K KG+LLYGPPG GKTL+A+A
Sbjct: 929 PTVTWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAI 988
Query: 225 AAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEV 284
A + A F+ + GP+L+ M+ G+ VRD F A+ SPCIIF DEID++ +R +S
Sbjct: 989 ANECKANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKER-NSNT 1047
Query: 285 SGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEE 344
+ D R + ++L ++DG + I +IAATNR DILD AL R GRLD+ I P +
Sbjct: 1048 NNDAS-DRVINQILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDLK 1106
Query: 345 ARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEA 387
+R I + + ++ DV+ ++A+ T+ F+GA + +C A
Sbjct: 1107 SRYSIFKAILKNTPLNEDVDIHDMAKRTEGFSGADITNLCQSA 1149
>UNIPROTKB|E1BZ74 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0016265 "death" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0042407 "cristae formation" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0060013 "righting
reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0008270 GO:GO:0006508
GO:GO:0040014 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 GO:GO:0016265
GO:GO:0060013 EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00603273 Ensembl:ENSGALT00000022474 ArrayExpress:E1BZ74
Uniprot:E1BZ74
Length = 805
Score = 498 (180.4 bits), Expect = 4.8e-47, P = 4.8e-47
Identities = 103/265 (38%), Positives = 162/265 (61%)
Query: 151 EYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLY 210
E ++V E+D K + D+ G E+ E++E + + + ++++ LG + PKG +L
Sbjct: 293 ETTAKVLKDEIDVK----FKDVAGCEEAKLEIMEFVNF-LKNPKQYEDLGAKIPKGAILT 347
Query: 211 GPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFID 270
GPPGTGKTL+A+A A + N F+ + G + ++MF+G G VRD F LA++ +PCI+FID
Sbjct: 348 GPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDLFALARKNAPCILFID 407
Query: 271 EIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSG 330
EIDA+G KR G E + T+ +LL ++DGF++ + ++A TNR DILDPALMR G
Sbjct: 408 EIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPG 467
Query: 331 RLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARS----TDDFNGAQLKAVCVE 386
R DR+I P + RA I ++H R + + ++ + LAR T F+GA + VC E
Sbjct: 468 RFDRQIYIGPPDIKGRASIFKVHLRPLKLDTVLDKDNLARKLASLTPGFSGADIANVCNE 527
Query: 387 AGMLALRRDATEVNHEDFNEGIIQV 411
A ++A R + +N + F + I +V
Sbjct: 528 AALIAARHLSDAINQKHFEQAIERV 552
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 498 (180.4 bits), Expect = 5.5e-47, P = 5.5e-47
Identities = 97/243 (39%), Positives = 154/243 (63%)
Query: 169 YNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQT 228
Y+DIGG KQ+ ++ E + LP+ H + F+ +G++PP+G+L+YGPPGTGKTLMARA A +T
Sbjct: 224 YDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANET 283
Query: 229 NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDR 288
A F + GP+++ G+ +R AF+ A++ SP IIFIDEID+I KR + +G+
Sbjct: 284 GAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKR--EKTNGEV 341
Query: 289 EVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARAR 348
E +R + +LL +DG + + V+AATNR + +DPAL R GR DR+++ P R
Sbjct: 342 E-RRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLE 400
Query: 349 ILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR--DATEVNHEDFNE 406
IL IH++ M + DV+ E +A T + G+ L ++C EA M +R D +++ + +
Sbjct: 401 ILSIHTKNMKLGEDVDLETIAAETHGYVGSDLASLCSEAAMQQIREKMDLIDLDEDTIDA 460
Query: 407 GII 409
++
Sbjct: 461 EVL 463
Score = 487 (176.5 bits), Expect = 8.9e-46, P = 8.9e-46
Identities = 104/275 (37%), Positives = 159/275 (57%)
Query: 133 DLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTH 192
D +GV +++ L S ++ + V E P + DIGGLE+ +EL+E++ P+ H
Sbjct: 464 DSLGVTMENFRY--ALGVSNPSALREVAVVEVPNVRWEDIGGLEEVKRELIESVQYPVDH 521
Query: 193 KERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV 252
E+FQK G+ P +GVL YGPPGTGKT++A+A A + A F+ + GP+L+ M+ G+ +
Sbjct: 522 PEKFQKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNI 581
Query: 253 RDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKV 312
RD F A+ +PC++F+DE+D+I R S R + +LL ++DG +S + V
Sbjct: 582 RDIFDKARAAAPCVVFLDELDSIAKSRGGSVGDAGGASDRVVNQLLTEMDGMTSKKNVFV 641
Query: 313 IAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARST 372
I ATNR + LD AL+R GRLD + P P + +R IL+ RK V DV+ E +A T
Sbjct: 642 IGATNRPEQLDAALVRPGRLDTLVYVPLPDQASREGILKAQLRKTPVASDVDIEFIASKT 701
Query: 373 DDFNGAQLKAVCVEAGMLALRRD-ATEVNHEDFNE 406
F+GA L V A LA++ + E+ + E
Sbjct: 702 HGFSGADLGFVTQRAVKLAIKESISAEIERQKQRE 736
>CGD|CAL0000075 [details] [associations]
symbol:AFG3 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005745 "m-AAA complex"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 452 (164.2 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 95/241 (39%), Positives = 145/241 (60%)
Query: 154 SRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAI-VLPMTHKERFQKLGVRPPKGVLLYGP 212
S+ K + + + D+ G ++ +E++E + L HK ++KLG + P+G +L GP
Sbjct: 271 SKAKLFNQENEVKIKFKDVAGCDESKEEIMEFVKFLQDPHK--YEKLGAKIPRGAILSGP 328
Query: 213 PGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEI 272
PGTGKTL+A+A A + FL ++G + V+MF+G GA VRD F+ A+E +P IIF+DEI
Sbjct: 329 PGTGKTLLAKATAGEAGVPFLSVSGSEFVEMFVGVGASRVRDLFKTAREMAPAIIFVDEI 388
Query: 273 DAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRL 332
DAIG +R + + G+ E + T+ +LL ++DGF + D + V+A TNR DILD AL+R GR
Sbjct: 389 DAIGKERGNGRMGGNDERENTLNQLLVEMDGFDTTDHVVVLAGTNRPDILDKALLRPGRF 448
Query: 333 DRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVE--AGML 390
DR I P E R +I ++H K+ + + + + D QLK +E AG L
Sbjct: 449 DRHISIDVPDVEGRKQIFKVHLNKLKLKSVQDIDAKQKDVDFSKYQQLKNEEIEKLAGRL 508
Query: 391 A 391
A
Sbjct: 509 A 509
Score = 68 (29.0 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 368 LARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQA--KKKASL 419
LA T F GA + C E ++A R DA V+ F + I +V A +KK+ +
Sbjct: 508 LAALTPGFAGADIANCCNEGALIAAREDAPAVDTYHFEQAIERVIAGLEKKSRI 561
>UNIPROTKB|Q5AJC2 [details] [associations]
symbol:AFG3 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 452 (164.2 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 95/241 (39%), Positives = 145/241 (60%)
Query: 154 SRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAI-VLPMTHKERFQKLGVRPPKGVLLYGP 212
S+ K + + + D+ G ++ +E++E + L HK ++KLG + P+G +L GP
Sbjct: 271 SKAKLFNQENEVKIKFKDVAGCDESKEEIMEFVKFLQDPHK--YEKLGAKIPRGAILSGP 328
Query: 213 PGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEI 272
PGTGKTL+A+A A + FL ++G + V+MF+G GA VRD F+ A+E +P IIF+DEI
Sbjct: 329 PGTGKTLLAKATAGEAGVPFLSVSGSEFVEMFVGVGASRVRDLFKTAREMAPAIIFVDEI 388
Query: 273 DAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRL 332
DAIG +R + + G+ E + T+ +LL ++DGF + D + V+A TNR DILD AL+R GR
Sbjct: 389 DAIGKERGNGRMGGNDERENTLNQLLVEMDGFDTTDHVVVLAGTNRPDILDKALLRPGRF 448
Query: 333 DRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVE--AGML 390
DR I P E R +I ++H K+ + + + + D QLK +E AG L
Sbjct: 449 DRHISIDVPDVEGRKQIFKVHLNKLKLKSVQDIDAKQKDVDFSKYQQLKNEEIEKLAGRL 508
Query: 391 A 391
A
Sbjct: 509 A 509
Score = 68 (29.0 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 368 LARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQA--KKKASL 419
LA T F GA + C E ++A R DA V+ F + I +V A +KK+ +
Sbjct: 508 LAALTPGFAGADIANCCNEGALIAAREDAPAVDTYHFEQAIERVIAGLEKKSRI 561
>UNIPROTKB|Q8NB90 [details] [associations]
symbol:SPATA5 "Spermatogenesis-associated protein 5"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0005737
GO:GO:0030154 GO:GO:0007283 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 KO:K14575 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 EMBL:AC021205
EMBL:AF361489 EMBL:AF479656 EMBL:AK091384 EMBL:AC026402
EMBL:AC097492 EMBL:AC109357 EMBL:BC048217 IPI:IPI00329583
IPI:IPI00890715 IPI:IPI00890727 RefSeq:NP_660208.2
UniGene:Hs.709648 ProteinModelPortal:Q8NB90 SMR:Q8NB90
IntAct:Q8NB90 STRING:Q8NB90 PhosphoSite:Q8NB90 DMDM:308153554
PaxDb:Q8NB90 PRIDE:Q8NB90 DNASU:166378 Ensembl:ENST00000274008
GeneID:166378 KEGG:hsa:166378 UCSC:uc003iey.3 UCSC:uc003iez.4
CTD:166378 GeneCards:GC04P123844 H-InvDB:HIX0022056 HGNC:HGNC:18119
HPA:HPA036451 MIM:613940 neXtProt:NX_Q8NB90 PharmGKB:PA38294
HOVERGEN:HBG108504 InParanoid:Q8NB90 OMA:NDIRPSA OrthoDB:EOG43FGWF
PhylomeDB:Q8NB90 GenomeRNAi:166378 NextBio:88589 Bgee:Q8NB90
CleanEx:HS_SPATA5 Genevestigator:Q8NB90 Uniprot:Q8NB90
Length = 893
Score = 496 (179.7 bits), Expect = 1.3e-46, P = 1.3e-46
Identities = 107/281 (38%), Positives = 165/281 (58%)
Query: 146 DTLPSEYDSRVKAM-EVD-EKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRP 203
D L + D R AM E+ + P ++DIGGLE +L +A+ P+ H E F ++G++P
Sbjct: 601 DFLQAMNDIRPSAMREIAIDVPNVSWSDIGGLESIKLKLEQAVEWPLKHPESFIRMGIQP 660
Query: 204 PKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKS 263
PKGVLLYGPPG KT++A+A A ++ FL + GP+L+ ++G+ + VR+ F+ A+ +
Sbjct: 661 PKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFRKARAVA 720
Query: 264 PCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILD 323
P IIF DE+DA+ +R S +G+ R + +LL ++DG + ++AATNR D +D
Sbjct: 721 PSIIFFDELDALAVERGSSLGAGN-VADRVLAQLLTEMDGIEQLKDVTILAATNRPDRID 779
Query: 324 PALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAV 383
ALMR GR+DR I P P R I ++ M V +V+ +EL TD ++GA++ AV
Sbjct: 780 KALMRPGRIDRIIYVPLPDAATRREIFKLQFHSMPVSNEVDLDELILQTDAYSGAEIVAV 839
Query: 384 CVEAGMLALRRD--ATEVNHEDFNEGIIQVQAKKKASLNYY 422
C EA +LAL D A + F + + V + SL +
Sbjct: 840 CREAALLALEEDIQANLIMKRHFTQALSTVTPRIPESLRRF 880
Score = 417 (151.9 bits), Expect = 4.7e-38, P = 4.7e-38
Identities = 104/284 (36%), Positives = 157/284 (55%)
Query: 138 NKDS-YLILDTLP---SEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHK 193
N D+ Y I T +E D K + K T Y+ IGGL Q++ + E I LP+
Sbjct: 319 NTDTFYFISSTTRVNFTEIDKNSKEQDNQFKVT--YDMIGGLSSQLKAIREIIELPLKQP 376
Query: 194 ERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVR 253
E F+ G+ P+GVLLYGPPGTGKT++ARA A + A + GP+++ F G+ +R
Sbjct: 377 ELFKSYGIPAPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEAKLR 436
Query: 254 DAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVI 313
F A + P IIFIDE+DA+ KR ++ ++ V ++L L++ + S+ ++ V+
Sbjct: 437 QIFAEATLRHPSIIFIDELDALCPKREGAQNEVEKRVVASLLTLMDGIGSEVSEGQVLVL 496
Query: 314 AATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKM-NVHPDVNFEELARST 372
ATNR LD AL R GR D++IE P + R ILQ R++ ++ + +LA S
Sbjct: 497 GATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSA 556
Query: 373 DDFNGAQLKAVCVEAGMLALRRDAT-EVNHEDFN-EGIIQVQAK 414
+ GA LK +C EAG+ ALRR + N D G++++ K
Sbjct: 557 HGYVGADLKVLCNEAGLCALRRILKKQPNLPDVKVAGLVKITLK 600
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 493 (178.6 bits), Expect = 1.6e-46, P = 1.6e-46
Identities = 99/248 (39%), Positives = 152/248 (61%)
Query: 156 VKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGT 215
VK + D Y+DIGG+ KQ+ ++ E + LP+ H + F+ +GV+PPKG+LLYGPPG
Sbjct: 188 VKREDEDRLDEVGYDDIGGVRKQLGQIRELVELPLRHPQLFKNIGVKPPKGILLYGPPGC 247
Query: 216 GKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAI 275
GKT++ARA A +T A F + GP+++ G+ +R AF+ A++ +P IIFIDEID+I
Sbjct: 248 GKTMIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSI 307
Query: 276 GTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRK 335
KR + G+ E +R + +LL +DG S + V+ ATNR + +DPAL R GR DR+
Sbjct: 308 APKR--EKTQGEVE-RRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDRE 364
Query: 336 IEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD 395
I+ P R I++IH++ M + V+ E +A T + GA L A+C E+ + +R
Sbjct: 365 IDITIPDATGRLEIMRIHTKNMKLDETVDLEAVANETHGYVGADLAALCTESALQCIREK 424
Query: 396 ATEVNHED 403
++ ED
Sbjct: 425 MDVIDLED 432
Score = 493 (178.6 bits), Expect = 1.6e-46, P = 1.6e-46
Identities = 102/259 (39%), Positives = 153/259 (59%)
Query: 135 VGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKE 194
+ V +D + TL + R +EV PT + DIGGLE +EL E + P+ H E
Sbjct: 443 MSVTQDHFRTALTLSNPSALRETVVEV---PTTTWEDIGGLEGVKRELRETVQYPVEHPE 499
Query: 195 RFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRD 254
+F+K G++P KGVL YGPPG GKTL+A+A A + A F+ + GP+L+ M+ G+ VR+
Sbjct: 500 KFRKFGMQPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRE 559
Query: 255 AFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIA 314
F A++ +PC++F DE+D+I R S+ R + ++L ++DG ++ + +I
Sbjct: 560 LFDKARQAAPCVLFFDELDSIARSRGSSQGDAGGAGDRVINQILTEMDGMNAKKNVFIIG 619
Query: 315 ATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDD 374
ATNR DI+DPA++R GRLD+ I P P +R IL+ K V DV+ E L + T
Sbjct: 620 ATNRPDIIDPAILRPGRLDQLIYIPLPDLPSRVAILKACLNKSPVAKDVDLEFLGQKTQG 679
Query: 375 FNGAQLKAVCVEAGMLALR 393
F+GA L +C A LA+R
Sbjct: 680 FSGADLTEICQRACKLAIR 698
>MGI|MGI:1927170 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:1927170 GO:GO:0007275
GO:GO:0005739 GO:GO:0005524 GO:GO:0030154 GO:GO:0007283
eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 HSSP:Q9WZ49
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073
CTD:166378 HOVERGEN:HBG108504 OMA:NDIRPSA OrthoDB:EOG43FGWF
EMBL:AF049099 EMBL:AK011111 EMBL:AK144998 EMBL:AL669927
EMBL:AL627074 EMBL:AL645968 IPI:IPI00649667 RefSeq:NP_001156983.1
RefSeq:NP_067318.2 UniGene:Mm.172679 ProteinModelPortal:Q3UMC0
SMR:Q3UMC0 PhosphoSite:Q3UMC0 PaxDb:Q3UMC0 PRIDE:Q3UMC0
Ensembl:ENSMUST00000029277 Ensembl:ENSMUST00000108112 GeneID:57815
KEGG:mmu:57815 UCSC:uc008pau.2 InParanoid:Q3UMC0 NextBio:314006
Bgee:Q3UMC0 Genevestigator:Q3UMC0 Uniprot:Q3UMC0
Length = 893
Score = 495 (179.3 bits), Expect = 1.7e-46, P = 1.7e-46
Identities = 102/252 (40%), Positives = 154/252 (61%)
Query: 146 DTLPSEYDSRVKAM-EVD-EKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRP 203
D L D R AM EV + P ++DIGGLE +L +A+ P+ H + F ++G++P
Sbjct: 601 DFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPKSFNRMGIQP 660
Query: 204 PKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKS 263
PKGVLLYGPPG KT++A+A A ++ FL + GP+L+ ++G+ + VR+ F+ A+ +
Sbjct: 661 PKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVA 720
Query: 264 PCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILD 323
P IIF DE+DA+ +R S +G+ R + +LL ++DG + V+AATNR D +D
Sbjct: 721 PSIIFFDELDALAVERGSSSGAGN-VADRVLAQLLTEMDGIEQLKNVTVLAATNRPDRID 779
Query: 324 PALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAV 383
ALMR GR+DR I P P R IL + M + +V+ +EL TD ++GA++ AV
Sbjct: 780 KALMRPGRIDRIIYVPLPDAATRREILNLQFHSMPISNEVDLDELVLQTDTYSGAEIIAV 839
Query: 384 CVEAGMLALRRD 395
C EA +LAL +
Sbjct: 840 CKEAALLALEEN 851
Score = 418 (152.2 bits), Expect = 3.7e-38, P = 3.7e-38
Identities = 105/312 (33%), Positives = 166/312 (53%)
Query: 87 EAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDL-VGVNKDSYLIL 145
++ DG+ + L+ KC S+++ PV + LKP N D++ +
Sbjct: 272 QSPRDGSGLGLEESTGLKCSF--DSSKEGNTQPVS---EEKLLKPASAGTKSNTDTFYFI 326
Query: 146 DTLPSEYDSRV--KAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRP 203
+ ++ + E D + Y+ IGGL Q++ + E I LP+ E F+ G+
Sbjct: 327 SSTTRINLRKICTNSKEQDSQFKVTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPA 386
Query: 204 PKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKS 263
P+G+LLYGPPGTGKT++ARA A + A + GP+++ F G+ +R F A +
Sbjct: 387 PRGLLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRH 446
Query: 264 PCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILD 323
P IIFIDE+DA+ KR ++ ++ V ++L L++ + S+ R+ V+ ATNR LD
Sbjct: 447 PSIIFIDELDALCPKREGAQSEVEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALD 506
Query: 324 PALMRSGRLDRKIEFPHPTEEARARILQIHSRKM-NVHPDVNFEELARSTDDFNGAQLKA 382
AL R GR D++IE P + R ILQ R++ ++ LA + + GA LKA
Sbjct: 507 AALRRPGRFDKEIEIGIPNAQDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKA 566
Query: 383 VCVEAGMLALRR 394
+C EAG+ ALRR
Sbjct: 567 LCNEAGLHALRR 578
>TAIR|locus:2174819 [details] [associations]
symbol:EMB3144 "EMBRYO DEFECTIVE 3144" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006508
"proteolysis" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0006399 "tRNA metabolic process" evidence=RCA]
[GO:0009658 "chloroplast organization" evidence=RCA] [GO:0016556
"mRNA modification" evidence=RCA] [GO:0009536 "plastid"
evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 GO:GO:0009790
GO:GO:0017111 IPI:IPI00527762 RefSeq:NP_201263.2 UniGene:At.28951
ProteinModelPortal:F4KF14 SMR:F4KF14 PRIDE:F4KF14
EnsemblPlants:AT5G64580.1 GeneID:836579 KEGG:ath:AT5G64580
OMA:LCWISAK Uniprot:F4KF14
Length = 855
Score = 493 (178.6 bits), Expect = 2.4e-46, P = 2.4e-46
Identities = 118/289 (40%), Positives = 167/289 (57%)
Query: 128 KLKPGDLVGVNKD--SYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEA 185
KL P DL K L L S SR K + +EK ++D G E +EL E
Sbjct: 272 KLIPCDLGTPTKKIRQPLKRQALGSLGKSRAKFISAEEKTGVTFDDFAGQEYIKRELQE- 330
Query: 186 IVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFI 245
IV + + E FQ G+ PKGVLL+GPPGTGKTL+A+A A + F G V+MF+
Sbjct: 331 IVRILKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAGEAGLPFFAANGTDFVEMFV 390
Query: 246 GDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGD-REVQRTMLELLNQLDGF 304
G A V+D F ++ +P IIFIDEIDAIG+KR ++ G E ++ +L++L ++DGF
Sbjct: 391 GVAASRVKDLFASSRSYAPSIIFIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGF 450
Query: 305 S-SDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDV 363
+ ++ VI ATNR DILDPAL+R GR D+ I P+++ R IL++H+R +
Sbjct: 451 KVTTSQVLVIGATNRLDILDPALLRKGRFDKIIRVGLPSKDGRLAILKVHARNKFFRSED 510
Query: 364 NFEEL----ARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGI 408
EEL A +T+DF GA+L+ V EAG+L R+D + E+ E +
Sbjct: 511 EKEELLQEVAENTEDFTGAELQNVLNEAGILTARKDLDYIGREELLEAL 559
>ASPGD|ASPL0000072959 [details] [associations]
symbol:AN4557 species:162425 "Emericella nidulans"
[GO:0097002 "mitochondrial inner boundary membrane" evidence=IEA]
[GO:0005745 "m-AAA complex" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006461 "protein
complex assembly" evidence=IEA] [GO:0006465 "signal peptide
processing" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 HOGENOM:HOG000217277 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:LYRFVTT MEROPS:M41.002 OrthoDB:EOG4J14HG
EMBL:BN001303 EMBL:AACD01000078 RefSeq:XP_662161.1
ProteinModelPortal:Q5B4H3 SMR:Q5B4H3 STRING:Q5B4H3
EnsemblFungi:CADANIAT00005881 GeneID:2872358 KEGG:ani:AN4557.2
Uniprot:Q5B4H3
Length = 883
Score = 493 (178.6 bits), Expect = 2.7e-46, P = 2.7e-46
Identities = 102/247 (41%), Positives = 155/247 (62%)
Query: 169 YNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQT 228
++D+ G+++ E++E + + ERFQKLG + P+G +L GPPGTGKTL+A+A A ++
Sbjct: 401 FSDVAGMDEAKVEIMEFVSF-LKSPERFQKLGAKIPRGAILSGPPGTGKTLLAKATAGES 459
Query: 229 NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDR 288
F ++G + V+MF+G G VRD F A++ +PCIIFIDEIDAIG R SG
Sbjct: 460 GVPFFSVSGSEFVEMFVGVGPSRVRDLFANARKNTPCIIFIDEIDAIGKSRSAKNFSGGN 519
Query: 289 -EVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARA 347
E + T+ ++L ++DGF++ D++ V+A TNR D+LD ALMR GR DR I PT + R
Sbjct: 520 DERESTLNQILTEMDGFNTSDQVVVLAGTNRPDVLDKALMRPGRFDRHISIDRPTMDGRK 579
Query: 348 RILQIHSRKMNVHPDVNF--EELARSTDDFNGAQLKAVCV-EAGMLALRRDATEVNHEDF 404
+I ++H +K+ D+++ L+ T F GA + A CV EA ++A R +A V + F
Sbjct: 580 QIFRVHLKKIVTKEDMDYLTGRLSALTPGFAGADI-ANCVNEAALVAARENAESVTMKHF 638
Query: 405 NEGIIQV 411
I +V
Sbjct: 639 ERAIERV 645
>DICTYBASE|DDB_G0278435 [details] [associations]
symbol:DDB_G0278435 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0278435 GO:GO:0005524 EMBL:AAFI02000023
GO:GO:0016887 eggNOG:COG0464 KO:K14575 InterPro:IPR009010
SUPFAM:SSF50692 RefSeq:XP_642364.1 ProteinModelPortal:Q54Y38
EnsemblProtists:DDB0237527 GeneID:8621569 KEGG:ddi:DDB_G0278435
InParanoid:Q54Y38 OMA:TSICREA Uniprot:Q54Y38
Length = 886
Score = 491 (177.9 bits), Expect = 4.5e-46, P = 4.5e-46
Identities = 101/265 (38%), Positives = 162/265 (61%)
Query: 161 VDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 220
V E P + DIGG E Q+L EAI P+ + + F ++G++PPKG+LLYGPPG KTL+
Sbjct: 613 VVEIPKVFWGDIGGQEHIKQKLKEAIEWPLKYPQSFIRMGIKPPKGILLYGPPGCSKTLL 672
Query: 221 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 280
A+A A ++ F+ + GP+L+ ++G+ + VRD F+ A++ SP I+F DEID + R
Sbjct: 673 AKALATESGLNFIAVKGPELLSKWVGESERAVRDIFKKARQNSPSILFFDEIDGLAISR- 731
Query: 281 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPH 340
E SG V+R + +LL ++DG + +I ATNR DI+D A++R+GR+DR +
Sbjct: 732 SGEGSG--AVERVVSQLLTEMDGIQPLTNVTIIGATNRPDIIDKAILRAGRIDRILYISP 789
Query: 341 PTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD--ATE 398
P +AR I IH +K+ D++ +L+ TD ++GA++ ++C EA + A++ D A E
Sbjct: 790 PDLDARKEIFNIHLKKVPHSSDIDINQLSILTDGYSGAEVTSICREASIAAMKEDINAKE 849
Query: 399 VNHEDFNEGIIQVQAK-KKASLNYY 422
+N F I V+ + L++Y
Sbjct: 850 INMSHFISAIGNVKKGITQEMLDFY 874
Score = 291 (107.5 bits), Expect = 3.4e-35, Sum P(2) = 3.4e-35
Identities = 81/237 (34%), Positives = 128/237 (54%)
Query: 80 LEMNPEDEAEEDGANIDLDSQRKGKCVVL-KTSTRQTIFLP-VVGLVDPDKLKPGDLVGV 137
+E N + + + D++S K + K F+ + + + K+K L+
Sbjct: 219 IENNSSNNNSNNNDDCDINSLDFNKLSLKEKKDNIDNEFIKSIFRICESTKIK---LINS 275
Query: 138 NKDSYLILD-TLPSEYDSRVKAM-EVDEKPTEDYN--DIGGLEKQIQELVEAIVLPMTHK 193
N S LI + T+ S ++ + ++D + N IGGL+ Q++++ E I L
Sbjct: 276 NLQSTLICESTINSNNNNNNNSNNKIDNNKNINLNFQSIGGLDLQVKQIRELIDLSFYKL 335
Query: 194 ERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVR 253
+ + GV+PPKG+LLYGPPGTGKTL+AR A QTNAT + G ++ F G K ++
Sbjct: 336 DLLKSFGVKPPKGILLYGPPGTGKTLLARIVATQTNATLFTINGADILDKFYGMTEKTLQ 395
Query: 254 DAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGF-SSDDR 309
F+ A +KSP IIFIDE+DA+ KR D+ S + E +R + LL +DG S+ D+
Sbjct: 396 KIFKDAAQKSPSIIFIDELDALCPKREDN--SSEVE-KRIVGSLLTLMDGVVSTSDQ 449
Score = 148 (57.2 bits), Expect = 3.4e-35, Sum P(2) = 3.4e-35
Identities = 39/116 (33%), Positives = 57/116 (49%)
Query: 302 DGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKM-NVH 360
+G D++ VI TNR D +D AL R GR D +IE P ++ R +IL I K+ N
Sbjct: 461 NGNCGGDKVIVIGCTNRPDSIDSALRRPGRFDNEIEISIPNQQGREQILNIFLSKIPNQL 520
Query: 361 PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 416
+A T F GA ++++C EA + R E N + F I+ + K K
Sbjct: 521 TSQEIAMIASKTHGFVGADIESLCKEASLKCFNRIKNE-NQKLFQSINIEKEEKGK 575
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 488 (176.8 bits), Expect = 6.4e-46, P = 6.4e-46
Identities = 103/259 (39%), Positives = 157/259 (60%)
Query: 146 DTLPSEYDSRVKAMEVDEKPTE-DYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPP 204
DT+ +K E +E E Y+D+GG+ KQ+ ++ E + LP+ H + F+ +GV+PP
Sbjct: 184 DTVIHYEGDPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPP 243
Query: 205 KGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSP 264
+G+LL+GPPGTGKTL+ARA A +T A F + GP+++ G+ +R AF ++ SP
Sbjct: 244 RGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSP 303
Query: 265 CIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDP 324
I+FIDEIDAI KR + G+ E +R + +LL +DG + + VIAATNR + +D
Sbjct: 304 AILFIDEIDAIAPKR--EKAHGEVE-KRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDG 360
Query: 325 ALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVC 384
AL R GR DR+I+ P R IL+IH++ M + DV+ E++A F GA L ++C
Sbjct: 361 ALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLC 420
Query: 385 VEAGMLALRRDATEVNHED 403
EA + +R ++ ED
Sbjct: 421 SEAAIQQIREKMELIDLED 439
Score = 481 (174.4 bits), Expect = 3.7e-45, P = 3.7e-45
Identities = 95/243 (39%), Positives = 146/243 (60%)
Query: 161 VDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 220
V E P ++DIGGL+ +EL E + P+ H E++ K G++P +GVL YGPPG GKTL+
Sbjct: 473 VVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLL 532
Query: 221 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 280
A+A A + A F+ + GP+L+ M+ G+ VRD F A+ +PC++F DE+D+I R
Sbjct: 533 AKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARG 592
Query: 281 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPH 340
S R + ++L ++DG ++ + +I ATNR DI+DPA++R GRLD+ I P
Sbjct: 593 GSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPL 652
Query: 341 PTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDAT-EV 399
P E +R +I + RK + D++ LA++T F+GA L +C A LA+R E+
Sbjct: 653 PDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESIEREI 712
Query: 400 NHE 402
E
Sbjct: 713 RQE 715
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 488 (176.8 bits), Expect = 6.4e-46, P = 6.4e-46
Identities = 103/259 (39%), Positives = 157/259 (60%)
Query: 146 DTLPSEYDSRVKAMEVDEKPTE-DYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPP 204
DT+ +K E +E E Y+D+GG+ KQ+ ++ E + LP+ H + F+ +GV+PP
Sbjct: 184 DTVIHYEGDPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPP 243
Query: 205 KGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSP 264
+G+LL+GPPGTGKTL+ARA A +T A F + GP+++ G+ +R AF ++ SP
Sbjct: 244 RGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSP 303
Query: 265 CIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDP 324
I+FIDEIDAI KR + G+ E +R + +LL +DG + + VIAATNR + +D
Sbjct: 304 AILFIDEIDAIAPKR--EKAHGEVE-KRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDG 360
Query: 325 ALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVC 384
AL R GR DR+I+ P R IL+IH++ M + DV+ E++A F GA L ++C
Sbjct: 361 ALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLC 420
Query: 385 VEAGMLALRRDATEVNHED 403
EA + +R ++ ED
Sbjct: 421 SEAAIQQIREKMELIDLED 439
Score = 481 (174.4 bits), Expect = 3.7e-45, P = 3.7e-45
Identities = 95/243 (39%), Positives = 146/243 (60%)
Query: 161 VDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 220
V E P ++DIGGL+ +EL E + P+ H E++ K G++P +GVL YGPPG GKTL+
Sbjct: 473 VVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLL 532
Query: 221 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 280
A+A A + A F+ + GP+L+ M+ G+ VRD F A+ +PC++F DE+D+I R
Sbjct: 533 AKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARG 592
Query: 281 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPH 340
S R + ++L ++DG ++ + +I ATNR DI+DPA++R GRLD+ I P
Sbjct: 593 GSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPL 652
Query: 341 PTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDAT-EV 399
P E +R +I + RK + D++ LA++T F+GA L +C A LA+R E+
Sbjct: 653 PDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESIEREI 712
Query: 400 NHE 402
E
Sbjct: 713 RQE 715
>WB|WBGene00004978 [details] [associations]
symbol:spg-7 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008340 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0008270 GO:GO:0006508
GO:GO:0000003 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0030968
EMBL:FO081580 HSSP:Q9LCZ4 RefSeq:NP_491165.2
ProteinModelPortal:Q9N3T5 SMR:Q9N3T5 STRING:Q9N3T5 MEROPS:M41.A10
PaxDb:Q9N3T5 EnsemblMetazoa:Y47G6A.10 GeneID:171915
KEGG:cel:CELE_Y47G6A.10 UCSC:Y47G6A.10 CTD:171915
WormBase:Y47G6A.10 InParanoid:Q9N3T5 NextBio:873225 Uniprot:Q9N3T5
Length = 782
Score = 486 (176.1 bits), Expect = 8.6e-46, P = 8.6e-46
Identities = 104/257 (40%), Positives = 162/257 (63%)
Query: 169 YNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQT 228
+ D+ G E+ E++E + + + ++++ LG + PKG +L GPPGTGKTL+A+A A +
Sbjct: 292 FADVAGCEEAKIEIMEFVNF-LKNPQQYKDLGAKIPKGAILTGPPGTGKTLLAKATAGEA 350
Query: 229 NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSE-VSGD 287
N F+ ++G + ++MF+G G VRD F +A++ SPCI+FIDEIDA+G KR + G
Sbjct: 351 NVPFITVSGSEFLEMFVGVGPARVRDMFSMARKNSPCILFIDEIDAVGRKRGGKGGMGGH 410
Query: 288 REVQRTMLELLNQLDGFSSDDR-IKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 346
E + T+ +LL ++DGF++D+ + VIAATNR DILD AL+R GR DR+I P P + R
Sbjct: 411 SEQENTLNQLLVEMDGFTTDESSVIVIAATNRVDILDSALLRPGRFDRQIYVPVPDIKGR 470
Query: 347 ARILQIHSRKMNVHPD--VNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDF 404
A I ++H + D V +LA T F+GA + VC EA ++A R E++++ F
Sbjct: 471 ASIFRVHLGPLRTSLDKTVLSRKLAAHTPGFSGADISNVCNEAALIAARDANHEISNKHF 530
Query: 405 NEGIIQVQA--KKKASL 419
+ I +V A +KK +
Sbjct: 531 EQAIERVVAGMEKKTQV 547
>TAIR|locus:2076929 [details] [associations]
symbol:AT3G02450 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR011546 Pfam:PF00004 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:AC021640
EMBL:CP002686 GO:GO:0051301 GO:GO:0008270 GO:GO:0009941
GO:GO:0004222 GO:GO:0017111 HSSP:Q9LCZ4 EMBL:AY062811 EMBL:BT008384
IPI:IPI00524458 RefSeq:NP_186894.1 UniGene:At.27477
ProteinModelPortal:Q9M895 SMR:Q9M895 STRING:Q9M895 PRIDE:Q9M895
EnsemblPlants:AT3G02450.1 GeneID:821139 KEGG:ath:AT3G02450
InParanoid:Q9M895 OMA:SRRIYYN ProtClustDB:CLSN2685201
Genevestigator:Q9M895 Uniprot:Q9M895
Length = 622
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 107/248 (43%), Positives = 150/248 (60%)
Query: 163 EKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMAR 222
+ PT ++D+ G++ ELVE IV + ++KLG R P+GVLL GPPGTGKTL+AR
Sbjct: 327 KNPTVGFDDVEGVDSAKDELVE-IVSCLQGSINYKKLGARLPRGVLLVGPPGTGKTLLAR 385
Query: 223 ACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDS 282
A A + F ++ + V++F+G GA +RD F A++ SP IIFIDE+DA+G KR S
Sbjct: 386 AVAGEAGVPFFSVSASEFVELFVGRGAARIRDLFNAARKNSPSIIFIDELDAVGGKRGRS 445
Query: 283 EVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPT 342
+ +R+ +T+ +LL ++DGF SD ++ VIAATNR + LD AL R GR RK+ P
Sbjct: 446 -FNDERD--QTLNQLLTEMDGFESDTKVIVIAATNRPEALDSALCRPGRFSRKVLVAEPD 502
Query: 343 EEARARILQIHSRKMNVHPDVNF--EELARSTDDFNGAQLKAVCVEAGMLALRRDATEVN 400
+E R +IL IH R + + D + +A T F GA L + EA +LA RR V
Sbjct: 503 QEGRRKILAIHLRDVPLEEDAFLICDLVASLTPGFVGADLANIVNEAALLAARRGGEAVA 562
Query: 401 HEDFNEGI 408
ED E I
Sbjct: 563 REDIMEAI 570
>UNIPROTKB|F8W938 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI01012615 ProteinModelPortal:F8W938 SMR:F8W938
Ensembl:ENST00000361463 ArrayExpress:F8W938 Bgee:F8W938
Uniprot:F8W938
Length = 589
Score = 446 (162.1 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
Identities = 96/226 (42%), Positives = 138/226 (61%)
Query: 169 YNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQT 228
+ D+GG + ++E+ + ++ M H E + LGV PP+GVLL+GPPG GKTL+A A A +
Sbjct: 158 FEDVGGNDMTLKEVCKMLI-HMRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGEL 216
Query: 229 NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDR 288
+ LK+A P++V G+ + +R+ F+ A +PCIIFIDEIDAI KR + +R
Sbjct: 217 DLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKREVASKDMER 276
Query: 289 EVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARAR 348
+ +L ++ L+ ++ R+ VI ATNR D LDPAL R+GR DR+I P E +R R
Sbjct: 277 RIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRER 336
Query: 349 ILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 394
ILQ RK+ + +F LA T F GA L A+C EA M A+ R
Sbjct: 337 ILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNR 382
Score = 296 (109.3 bits), Expect = 4.9e-27, Sum P(2) = 4.9e-27
Identities = 71/210 (33%), Positives = 115/210 (54%)
Query: 76 IVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLV-DPDKLKPGDL 134
++++ E ++ ED + + +R G TS Q ++GL+ D D L +
Sbjct: 384 LMKLQEQQKKNPEMEDLPSKGVQEERLG---TEPTSETQDELQRLLGLLRDQDPLSEEQM 440
Query: 135 VGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKE 194
G+ + + L S S + V P + DIG LE +EL AI+ P+ + +
Sbjct: 441 QGLCIELNDFIVALSSVQPSAKREGFVTV-PNVTWADIGALEDIREELTMAILAPVRNPD 499
Query: 195 RFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRD 254
+F+ LG+ P GVLL GPPG GKTL+A+A A ++ F+ + GP+L+ M++G+ + VR
Sbjct: 500 QFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQ 559
Query: 255 AFQLAKEKSPCIIFIDEIDAIGTKRFDSEV 284
FQ AK +PC+IF DE+DA+ +R D E+
Sbjct: 560 VFQRAKNSAPCVIFFDEVDALCPRRSDREI 589
Score = 50 (22.7 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
Identities = 11/41 (26%), Positives = 24/41 (58%)
Query: 11 LEDDQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDS 51
++D + SS+ D+ R +L + + KE+LQ + E+++
Sbjct: 98 IQDSKDSSLLESDMKRKGKLKNKGSKRKKEDLQEVDGEIEA 138
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 485 (175.8 bits), Expect = 1.3e-45, P = 1.3e-45
Identities = 99/259 (38%), Positives = 157/259 (60%)
Query: 146 DTLPSEYDSRVKAMEVDEKPTE-DYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPP 204
DT+ +K E +E + Y+D+GG+ KQ+ ++ E + LP+ H + F+ +G++PP
Sbjct: 185 DTMIHYEGDPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPP 244
Query: 205 KGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSP 264
+G+LL+GPPGTGKTL+ARA A +T + F + GP+++ G+ +R AF+ ++ P
Sbjct: 245 RGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQP 304
Query: 265 CIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDP 324
I+FIDEIDAI KR + +G+ E +R + +LL +DG + VIAATNR + +D
Sbjct: 305 AILFIDEIDAIAPKR--EKTNGEVE-RRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDG 361
Query: 325 ALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVC 384
AL R GR DR+I+ P R IL+IH++ M + DV+ E++A F GA L ++C
Sbjct: 362 ALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLC 421
Query: 385 VEAGMLALRRDATEVNHED 403
EA + +R ++ ED
Sbjct: 422 SEAALQQIREKMELIDLED 440
Score = 474 (171.9 bits), Expect = 2.2e-44, P = 2.2e-44
Identities = 95/235 (40%), Positives = 145/235 (61%)
Query: 161 VDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 220
V E P ++DIGGL+ +EL E + P+ H E++ K G++P +GVL YGPPG GKTL+
Sbjct: 474 VVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLL 533
Query: 221 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 280
A+A A + A F+ + GP+L+ M+ G+ VRD F A+ +PC++F DE+D+I R
Sbjct: 534 AKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKAR- 592
Query: 281 DSEVSGDR--EVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEF 338
GD R + ++L ++DG ++ + +I ATNR DI+DPA++R GRLD+ I
Sbjct: 593 GGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYI 652
Query: 339 PHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 393
P P E +R +IL+ RK + D++ LA++T F+GA L +C A LA+R
Sbjct: 653 PLPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIR 707
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 485 (175.8 bits), Expect = 1.3e-45, P = 1.3e-45
Identities = 99/259 (38%), Positives = 157/259 (60%)
Query: 146 DTLPSEYDSRVKAMEVDEKPTE-DYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPP 204
DT+ +K E +E + Y+D+GG+ KQ+ ++ E + LP+ H + F+ +G++PP
Sbjct: 185 DTMIHYEGDPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPP 244
Query: 205 KGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSP 264
+G+LL+GPPGTGKTL+ARA A +T + F + GP+++ G+ +R AF+ ++ P
Sbjct: 245 RGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQP 304
Query: 265 CIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDP 324
I+FIDEIDAI KR + +G+ E +R + +LL +DG + VIAATNR + +D
Sbjct: 305 AILFIDEIDAIAPKR--EKTNGEVE-RRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDG 361
Query: 325 ALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVC 384
AL R GR DR+I+ P R IL+IH++ M + DV+ E++A F GA L ++C
Sbjct: 362 ALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLC 421
Query: 385 VEAGMLALRRDATEVNHED 403
EA + +R ++ ED
Sbjct: 422 SEAALQQIREKMELIDLED 440
Score = 474 (171.9 bits), Expect = 2.2e-44, P = 2.2e-44
Identities = 95/235 (40%), Positives = 145/235 (61%)
Query: 161 VDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 220
V E P ++DIGGL+ +EL E + P+ H E++ K G++P +GVL YGPPG GKTL+
Sbjct: 474 VVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLL 533
Query: 221 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 280
A+A A + A F+ + GP+L+ M+ G+ VRD F A+ +PC++F DE+D+I R
Sbjct: 534 AKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKAR- 592
Query: 281 DSEVSGDR--EVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEF 338
GD R + ++L ++DG ++ + +I ATNR DI+DPA++R GRLD+ I
Sbjct: 593 GGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYI 652
Query: 339 PHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 393
P P E +R +IL+ RK + D++ LA++T F+GA L +C A LA+R
Sbjct: 653 PLPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIR 707
>UNIPROTKB|H0Y8B6 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
Ensembl:ENST00000469968 Uniprot:H0Y8B6
Length = 739
Score = 448 (162.8 bits), Expect = 2.1e-45, Sum P(2) = 2.1e-45
Identities = 118/365 (32%), Positives = 193/365 (52%)
Query: 76 IVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLV-DPDKLKPGDL 134
++++ E ++ ED + + +R G TS Q ++GL+ D D L +
Sbjct: 373 LMKLQEQQKKNPEMEDLPSKGVQEERLG---TEPTSETQDELQRLLGLLRDQDPLSEEQM 429
Query: 135 VGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKE 194
G+ + + L S S + V P + DIG LE +EL AI+ P+ + +
Sbjct: 430 QGLCIELNDFIVALSSVQPSAKREGFVTV-PNVTWADIGALEDIREELTMAILAPVRNPD 488
Query: 195 RFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRD 254
+F+ LG+ P GVLL GPPG GKTL+A+A A ++ F+ + GP+L+ M++G+ + VR
Sbjct: 489 QFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQ 548
Query: 255 AFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIA 314
FQ AK +PC+IF DE+DA+ +R D E R + +LL ++DG + ++ ++A
Sbjct: 549 VFQRAKNSAPCVIFFDEVDALCPRRSDRETGAS---VRVVNQLLTEMDGLEARQQVFIMA 605
Query: 315 ATNRADILDPALMRSGRLDRK--IEFPHPTEE-ARARILQIHSRKMNVHPDVNFEELARS 371
ATNR DI+DPA++R GRLD+ + P P + A + + + K + DVN E +A
Sbjct: 606 ATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGD 665
Query: 372 T--DDFNGAQLKAVCVEAGMLALRRDAT-----------EVNHEDFNEGIIQVQAK--KK 416
D + GA L A+ EA + ALR++ +V+H+ F E +V++ KK
Sbjct: 666 LRCDCYTGADLSALVREASICALRQEMARQKSGNEKGELKVSHKHFEEAFKKVRSSISKK 725
Query: 417 ASLNY 421
+ Y
Sbjct: 726 DQIMY 730
Score = 446 (162.1 bits), Expect = 3.6e-45, Sum P(2) = 3.6e-45
Identities = 96/226 (42%), Positives = 138/226 (61%)
Query: 169 YNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQT 228
+ D+GG + ++E+ + ++ M H E + LGV PP+GVLL+GPPG GKTL+A A A +
Sbjct: 147 FEDVGGNDMTLKEVCKMLI-HMRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGEL 205
Query: 229 NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDR 288
+ LK+A P++V G+ + +R+ F+ A +PCIIFIDEIDAI KR + +R
Sbjct: 206 DLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKREVASKDMER 265
Query: 289 EVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARAR 348
+ +L ++ L+ ++ R+ VI ATNR D LDPAL R+GR DR+I P E +R R
Sbjct: 266 RIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRER 325
Query: 349 ILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 394
ILQ RK+ + +F LA T F GA L A+C EA M A+ R
Sbjct: 326 ILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNR 371
Score = 57 (25.1 bits), Expect = 2.1e-45, Sum P(2) = 2.1e-45
Identities = 13/49 (26%), Positives = 29/49 (59%)
Query: 3 TAMVEDPNLEDDQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDS 51
++M + P+ +D + SS+ D+ R +L + + KE+LQ + E+++
Sbjct: 79 SSMEDYPDPQDSKDSSLLESDMKRKGKLKNKGSKRKKEDLQEVDGEIEA 127
Score = 44 (20.5 bits), Expect = 4.9e-44, Sum P(2) = 4.9e-44
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 80 LEMNPEDEAEEDGANIDLDSQRKGK 104
+E P+ + +D + ++ D +RKGK
Sbjct: 81 MEDYPDPQDSKDSSLLESDMKRKGK 105
>FB|FBgn0036702 [details] [associations]
symbol:CG6512 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0046331
"lateral inhibition" evidence=IMP] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:AE014296
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0030163 GO:GO:0046331
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OMA:YSEDTAM HSSP:Q9LCZ4 UniGene:Dm.986 GeneID:39922
KEGG:dme:Dmel_CG6512 FlyBase:FBgn0036702 GenomeRNAi:39922
NextBio:816090 EMBL:AY084199 RefSeq:NP_730248.2 SMR:Q8T4G5
IntAct:Q8T4G5 MINT:MINT-1004758 STRING:Q8T4G5
EnsemblMetazoa:FBtr0075251 UCSC:CG6512-RA InParanoid:Q8T4G5
Uniprot:Q8T4G5
Length = 826
Score = 483 (175.1 bits), Expect = 2.5e-45, P = 2.5e-45
Identities = 100/257 (38%), Positives = 153/257 (59%)
Query: 169 YNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQT 228
+ D+ G E+ E++E + + + +++ LG + PKG +L GPPGTGKTL+A+A A +
Sbjct: 327 FKDVAGCEEAKIEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 385
Query: 229 NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDR 288
N F+ ++G + ++MF+G G VRD F +A++ +PCI+FIDEIDA+G KR G
Sbjct: 386 NVPFITVSGSEFLEMFVGVGPSRVRDMFAMARKHAPCILFIDEIDAVGRKRGGKTFGGHS 445
Query: 289 EVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARAR 348
E + T+ +LL ++DGF++ + V+AATNR DILD ALMR GR DR+I P P + RA
Sbjct: 446 EQENTLNQLLVEMDGFNTTTNVVVLAATNRVDILDKALMRPGRFDRQIYVPAPDIKGRAS 505
Query: 349 ILQIHSRKMNVHPDVN--FEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 406
I ++H + D N ++A T F GA + VC EA ++A R + + F +
Sbjct: 506 IFKVHLGNLKTSLDKNELSRKMAALTPGFTGADIANVCNEAALIAARDSKDSIVLKHFEQ 565
Query: 407 GIIQVQAKKKASLNYYA 423
I +V A + N A
Sbjct: 566 AIERVIAGMEKKTNVLA 582
>TAIR|locus:2044209 [details] [associations]
symbol:CDC48B "cell division cycle 48B" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0051301 GO:GO:0005856 GO:GO:0015031 GO:GO:0007049
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC006836
GO:GO:0009524 EMBL:AY062443 EMBL:BT008371 IPI:IPI00527776
PIR:A84451 RefSeq:NP_178463.1 UniGene:At.27340
ProteinModelPortal:Q9ZPR1 SMR:Q9ZPR1 PaxDb:Q9ZPR1 PRIDE:Q9ZPR1
EnsemblPlants:AT2G03670.1 GeneID:814895 KEGG:ath:AT2G03670
GeneFarm:1901 TAIR:At2g03670 InParanoid:Q9ZPR1 OMA:RECNAHL
PhylomeDB:Q9ZPR1 ProtClustDB:CLSN2683845 Genevestigator:Q9ZPR1
GermOnline:AT2G03670 Uniprot:Q9ZPR1
Length = 603
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 100/245 (40%), Positives = 147/245 (60%)
Query: 163 EKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMAR 222
E P ++D+GGL+ ++L +A+ P+ H F K+G+ P +G+LL+GPPG KT +A+
Sbjct: 279 EIPKVTWDDVGGLKDLKKKLQQAVEWPIKHSAAFVKMGISPMRGILLHGPPGCSKTTLAK 338
Query: 223 ACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDS 282
A A A+F L+ +L M++G+G L+R+ FQ A+ SP IIF DE D + KR D
Sbjct: 339 AAANAAQASFFSLSCAELFSMYVGEGEALLRNTFQRARLASPSIIFFDEADVVACKRGDE 398
Query: 283 EVSGDREV-QRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHP 341
S V +R + LL ++DG I V+AATNR +D ALMR GR D + P P
Sbjct: 399 SSSNSSTVGERLLSTLLTEMDGLEEAKGILVLAATNRPYAIDAALMRPGRFDLVLYVPPP 458
Query: 342 TEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD--ATEV 399
EAR ILQ+H+R M + DV+ ++A TD F GA+L+ +C E+G ++LR + AT V
Sbjct: 459 DLEARFEILQVHTRNMTLGDDVDLRKIAEETDLFTGAELEGLCRESGTVSLRENIAATAV 518
Query: 400 NHEDF 404
+ F
Sbjct: 519 FNRHF 523
Score = 406 (148.0 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 89/240 (37%), Positives = 144/240 (60%)
Query: 171 DIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNA 230
+IGG E+ +Q L E I+ P + + LG++ P+G+LLYGPPGTGKT + RA + +A
Sbjct: 23 EIGGNERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVRAVVQECDA 82
Query: 231 TFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKS----PCIIFIDEIDAIGTKRFDSEVSG 286
+ L+ + + G+ K++R+AF A + P +IFIDEID + +R D+
Sbjct: 83 HLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCPRR-DARREQ 141
Query: 287 DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 346
D + + L++ SS R+ V+A+TNR D +DPAL R+GR D +E P EE R
Sbjct: 142 DVRIASQLFTLMDSNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEEDR 201
Query: 347 ARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR--DATEVNHEDF 404
+ILQ++++K+N+ P V+ + +A S + + GA L+A+C EA + A +R D+ + +DF
Sbjct: 202 LKILQLYTKKVNLDPSVDLQAIAISCNGYVGADLEALCREATISASKRSSDSLILTSQDF 261
>CGD|CAL0004443 [details] [associations]
symbol:orf19.2057 species:5476 "Candida albicans" [GO:0005745
"m-AAA complex" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 CGD:CAL0004443 GO:GO:0016021
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 EMBL:AACQ01000031 EMBL:AACQ01000030
MEROPS:M41.003 RefSeq:XP_719505.1 RefSeq:XP_719629.1
ProteinModelPortal:Q5AD10 SMR:Q5AD10 GeneID:3638753 GeneID:3638884
KEGG:cal:CaO19.2057 KEGG:cal:CaO19.9604 Uniprot:Q5AD10
Length = 846
Score = 483 (175.1 bits), Expect = 2.8e-45, P = 2.8e-45
Identities = 101/257 (39%), Positives = 156/257 (60%)
Query: 169 YNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQT 228
+ D+ G+ + QE++E + + + E+++KLG + P+G +L GPPGTGKTL+A+A A +
Sbjct: 372 FKDVAGMAEAKQEVMEFVKF-LQNPEKYEKLGAKIPRGAILSGPPGTGKTLLAKATAGEA 430
Query: 229 NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDR 288
F ++G + V+MF+G GA VRD F+ A+E +P I+F+DEIDAIG +R +G
Sbjct: 431 GVPFYSVSGSEFVEMFVGVGASRVRDLFKTARENAPSIVFVDEIDAIGKQRSKGNATGAN 490
Query: 289 EVQRTML-ELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARA 347
+ + T L +LL ++DGF + D + V+A TNR DILD ALMR GR DR + +P R
Sbjct: 491 DERETTLNQLLVEMDGFDTSDHVVVLAGTNRPDILDRALMRPGRFDRHVHIDNPELLGRK 550
Query: 348 RILQIHSRKMNVHPDVNFE---ELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDF 404
I +H +K+ + D++ + LA T F+GA + VC EA ++A R +A V F
Sbjct: 551 EIFDVHLQKITLQKDIDPDLSGRLAALTPGFSGADIANVCNEAALIAARYNAEFVTLRHF 610
Query: 405 NEGIIQV--QAKKKASL 419
I +V +KK+ L
Sbjct: 611 ELAIERVIGGVEKKSKL 627
>MGI|MGI:1928277 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=ISA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IGI] [GO:0008053 "mitochondrial fusion" evidence=IGI]
[GO:0008152 "metabolic process" evidence=ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IGI] [GO:0042407 "cristae formation" evidence=IGI]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1928277
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0031966
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 EMBL:AK012394 EMBL:AK159647 EMBL:AK167964
EMBL:AK168244 EMBL:BC056978 EMBL:AF329695 IPI:IPI00468514
IPI:IPI00652659 RefSeq:NP_473411.2 UniGene:Mm.287475
ProteinModelPortal:Q920A7 SMR:Q920A7 IntAct:Q920A7 STRING:Q920A7
MEROPS:M41.016 PhosphoSite:Q920A7 PaxDb:Q920A7 PRIDE:Q920A7
Ensembl:ENSMUST00000001520 Ensembl:ENSMUST00000098320 GeneID:114896
KEGG:mmu:114896 UCSC:uc009nwd.2 CTD:114896 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 InParanoid:Q920A7 KO:K08956 OMA:WDEKDFR
OrthoDB:EOG4SBDXC NextBio:368917 Bgee:Q920A7 CleanEx:MM_AFG3L1
Genevestigator:Q920A7 GermOnline:ENSMUSG00000031967 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
Uniprot:Q920A7
Length = 789
Score = 481 (174.4 bits), Expect = 3.2e-45, P = 3.2e-45
Identities = 97/247 (39%), Positives = 151/247 (61%)
Query: 169 YNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQT 228
+ D+ G E+ E++E + + + +++Q LG + PKG +L GPPGTGKTL+A+A A +
Sbjct: 299 FADVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 357
Query: 229 NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDR 288
N F+ + G + ++MF+G G VRD F +A++ +PCI+FIDEIDAIG KR + G
Sbjct: 358 NVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCILFIDEIDAIGRKRGRGHLGGQS 417
Query: 289 EVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARAR 348
E + T+ ++L ++DGF+S + V+A TNR DILDPAL R GR DR+I P + R+
Sbjct: 418 EQENTLNQMLVEMDGFNSSTNVVVLAGTNRPDILDPALTRPGRFDRQIYIGPPDIKGRSS 477
Query: 349 ILQIHSRKMNVHPDVNFEELARS----TDDFNGAQLKAVCVEAGMLALRRDATEVNHEDF 404
I ++H R + + ++ + L+R T F GA + VC EA ++A R + V F
Sbjct: 478 IFKVHLRPLKLDGSLSKDALSRKLAALTPGFTGADISNVCNEAALIAARHLSPSVQERHF 537
Query: 405 NEGIIQV 411
+ I +V
Sbjct: 538 EQAIERV 544
>POMBASE|SPBC16E9.10c [details] [associations]
symbol:SPBC16E9.10c "AAA family ATPase Rix7
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000055
"ribosomal large subunit export from nucleus" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16E9.10c GO:GO:0005524 GO:GO:0005730
EMBL:CU329671 GO:GO:0016887 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0000055 KO:K14571 OMA:NDMTLKE
OrthoDB:EOG40GH00 PIR:T39584 RefSeq:NP_595792.1
ProteinModelPortal:O14325 STRING:O14325 EnsemblFungi:SPBC16E9.10c.1
GeneID:2539968 KEGG:spo:SPBC16E9.10c NextBio:20801111
Uniprot:O14325
Length = 779
Score = 480 (174.0 bits), Expect = 3.9e-45, P = 3.9e-45
Identities = 98/249 (39%), Positives = 156/249 (62%)
Query: 155 RVKAMEVDEKPTEDYN--DIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGP 212
R KA E + +P D + DIGGL+ I EL+E + +P+ H E +Q G+ PP+GVLL+GP
Sbjct: 158 RQKA-EANREPPSDISLSDIGGLDDCINELLELVAMPIKHPEVYQYTGIHPPRGVLLHGP 216
Query: 213 PGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEI 272
PG GKT++A A A + F+ ++ P +V G+ K VR+ F+ AK +PC++FIDEI
Sbjct: 217 PGCGKTMLANALANELGVPFISISAPSIVSGMSGESEKKVREVFEEAKSLAPCLMFIDEI 276
Query: 273 DAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDR-IKVIAATNRADILDPALMRSGR 331
DA+ KR ++ +R + L +++L +D + + VI ATNR D LD AL R+GR
Sbjct: 277 DAVTPKRESAQREMERRIVAQFLTCMDELSFEKTDGKPVLVIGATNRPDSLDSALRRAGR 336
Query: 332 LDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLA 391
DR+I P+++AR +IL+ ++ + + D +F +LA+ T + GA LKA+ AG++A
Sbjct: 337 FDREICLTVPSQDAREKILRTMAKGLKLSGDFDFRQLAKQTPGYVGADLKALTAAAGIIA 396
Query: 392 LRRDATEVN 400
++R E++
Sbjct: 397 IKRIFNEIS 405
Score = 451 (163.8 bits), Expect = 6.0e-42, P = 6.0e-42
Identities = 104/270 (38%), Positives = 151/270 (55%)
Query: 126 PDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEA 185
PD L P +L + ++ L S K P +N+IG L+ EL A
Sbjct: 449 PDPLSPEELEPLAICPQDFIEALAKVQPSS-KREGFATVPGVSWNNIGALKSIRVELQMA 507
Query: 186 IVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFI 245
IV P+ E +Q +G+ P GVLL+GPPG GKTL+A+A A ++ A F+ + GP+L+ ++
Sbjct: 508 IVQPIKRPELYQSVGISAPTGVLLWGPPGCGKTLLAKAVANESKANFISIRGPELLNKYV 567
Query: 246 GDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFS 305
G+ + VR F A+ SPC+IF DE+DA+ +R DS V T LL +LDG S
Sbjct: 568 GESERAVRQVFLRARASSPCVIFFDELDAMVPRRDDSLSEASSRVVNT---LLTELDGLS 624
Query: 306 SDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNF 365
+ VIAATNR DI+DPA++R GRLD+ + P R IL+ +++ +H +VN
Sbjct: 625 DRSGVYVIAATNRPDIIDPAMLRPGRLDKTLLVDLPDAHERVEILKTLTKQTPLHEEVNL 684
Query: 366 EELARST--DDFNGAQLKAVCVEAGMLALR 393
+ L R +F+GA L A+ EA + ALR
Sbjct: 685 DVLGRDERCSNFSGADLAALVREAAVTALR 714
>DICTYBASE|DDB_G0284249 [details] [associations]
symbol:DDB_G0284249 "peptidase M41, FtsH
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006461 "protein complex assembly" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0044351 "macropinocytosis" evidence=RCA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284249 GO:GO:0016021 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0006461 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:AAFI02000064 RefSeq:XP_638674.1 ProteinModelPortal:Q54PX1
SMR:Q54PX1 MEROPS:M41.A17 EnsemblProtists:DDB0229917 GeneID:8624503
KEGG:ddi:DDB_G0284249 InParanoid:Q54PX1 OMA:VSIYGMN
ProtClustDB:CLSZ2846729 Uniprot:Q54PX1
Length = 764
Score = 476 (172.6 bits), Expect = 9.5e-45, P = 9.5e-45
Identities = 98/249 (39%), Positives = 153/249 (61%)
Query: 166 TEDYNDIGGL-EKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARAC 224
T ++D+ GL E +++ +E V + + ++F +G + P+G +L GPPGTGKTL+A+A
Sbjct: 298 TVKFSDVAGLGEAKVE--IEEFVNFLKNPKKFHDIGAKIPRGAILVGPPGTGKTLIAKAT 355
Query: 225 AAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEV 284
A + N F +G V+MF+G G VRD F+ A++ +PCI+FIDEIDA+G R
Sbjct: 356 AGEANVPFYSTSGSDFVEMFVGVGPSRVRDLFEQARKNAPCIVFIDEIDAVGRARGKGGF 415
Query: 285 SGDR-EVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTE 343
SG E + T+ +LL ++DGF + V+AATNR DILD AL+R GR DR+I +P
Sbjct: 416 SGSNDERENTLNQLLVEMDGFKPLKNVVVLAATNRPDILDKALLRPGRFDRQITIDNPDL 475
Query: 344 EARARILQIHSRKMNVHPDVNF-EELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHE 402
++R I ++H + + +N+ E L++ T F+GA + VC EA ++A RR A + E
Sbjct: 476 KSREEIFRVHLAALLLDKSINYAERLSKLTPGFSGADIANVCNEAALIAARRHAEIITLE 535
Query: 403 DFNEGIIQV 411
F+ + +V
Sbjct: 536 HFDAAVDRV 544
>POMBASE|SPBC543.09 [details] [associations]
symbol:yta12 "mitochondrial m-AAA protease Yta12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005745 "m-AAA complex" evidence=ISO] [GO:0006091 "generation
of precursor metabolites and energy" evidence=NAS] [GO:0006465
"signal peptide processing" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0008237 "metallopeptidase activity" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0033108 "mitochondrial respiratory chain complex
assembly" evidence=ISO] [GO:0045041 "protein import into
mitochondrial intermembrane space" evidence=ISO] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC543.09
GO:GO:0005524 GO:GO:0046872 EMBL:CU329671 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0004222 GO:GO:0006091
GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
KO:K08956 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 OMA:LYRFVTT
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0045041 GO:GO:0006465
GO:GO:0033108 RefSeq:NP_596797.1 ProteinModelPortal:Q9HGM3
SMR:Q9HGM3 STRING:Q9HGM3 MEROPS:M41.A14 EnsemblFungi:SPBC543.09.1
GeneID:2541079 KEGG:spo:SPBC543.09 NextBio:20802192 Uniprot:Q9HGM3
Length = 773
Score = 476 (172.6 bits), Expect = 1.0e-44, P = 1.0e-44
Identities = 100/269 (37%), Positives = 161/269 (59%)
Query: 154 SRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPP 213
SR K + + D+ G+++ +E++E + + + + +++LG + P+G +L GPP
Sbjct: 280 SRAKMFNHETDIKIKFADVAGVDEAKEEIMEFVKF-LKNPKFYERLGAKIPRGAILSGPP 338
Query: 214 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEID 273
GTGKTL+A+A A + N FL ++G + ++MF+G G VRD F A++ +PCIIFIDEID
Sbjct: 339 GTGKTLLAKATAGEANVPFLSVSGSEFLEMFVGVGPSRVRDLFATARKNAPCIIFIDEID 398
Query: 274 AIGTKRF-DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRL 332
AIG R + + E + T+ +LL ++DGF+S + I V A TNR D+LDPAL+R GR
Sbjct: 399 AIGKARGRGGQFGSNDERESTLNQLLVEMDGFTSSEHIVVFAGTNRPDVLDPALLRPGRF 458
Query: 333 DRKIEFPHPTEEARARILQIHSRKMNVHPDVNF--EELARSTDDFNGAQLKAVCVEAGML 390
DR+I P R +I ++H + + +++ + LA T F GA + VC E ++
Sbjct: 459 DRQITIDRPDIGGREQIFKVHLKHIKAADNIDLIAKRLAVLTSGFTGADIMNVCNEGALI 518
Query: 391 ALRRDATEVNHEDFNEGIIQVQA--KKKA 417
A R ++ EV F + I +V A +KK+
Sbjct: 519 AARSNSNEVQMVHFEQAIERVTAGLEKKS 547
>RGD|1309722 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=ISO] [GO:0008053 "mitochondrial fusion"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=ISO] [GO:0042407
"cristae formation" evidence=ISO] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1309722
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
IPI:IPI00365343 Ensembl:ENSRNOT00000065957 UCSC:RGD:1309722
ArrayExpress:F1LS61 Uniprot:F1LS61
Length = 761
Score = 474 (171.9 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 96/247 (38%), Positives = 149/247 (60%)
Query: 169 YNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQT 228
+ D+ G E+ E++E + + + +++Q LG + PKG +L GPPGTGKTL+A+A A +
Sbjct: 271 FADVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 329
Query: 229 NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDR 288
F+ + G + ++MF+G G VRD F +A++ +PCI+FIDEIDAIG KR + G
Sbjct: 330 KVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCILFIDEIDAIGRKRGRGHLGGQS 389
Query: 289 EVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARAR 348
E + T+ ++L ++DGF+S + V+A TNR DILDPAL R GR DR+I P + R+
Sbjct: 390 EQENTLNQMLVEMDGFNSTTNVVVLAGTNRPDILDPALTRPGRFDRQIYIGPPDIKGRSS 449
Query: 349 ILQIHSRKMNVHPDVNFEELARS----TDDFNGAQLKAVCVEAGMLALRRDATEVNHEDF 404
I ++H R + + + + L+R T F GA + VC EA ++A R + V F
Sbjct: 450 IFKVHLRPLKLDESLTRDALSRKLAALTPGFTGADISNVCNEAALIAARHLSPSVQERHF 509
Query: 405 NEGIIQV 411
+ I +V
Sbjct: 510 EQAIERV 516
>UNIPROTKB|E1BFQ0 [details] [associations]
symbol:E1BFQ0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042407 "cristae formation" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 OMA:WDEKDFR GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:DAAA02046282 IPI:IPI00707325 Ensembl:ENSBTAT00000056979
Uniprot:E1BFQ0
Length = 802
Score = 475 (172.3 bits), Expect = 1.6e-44, P = 1.6e-44
Identities = 99/249 (39%), Positives = 151/249 (60%)
Query: 169 YNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQT 228
+ D+ G E+ E++E + + + +++Q LG + PKG LL GPPGTGKTL+A+A A +
Sbjct: 302 FADVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGALLTGPPGTGKTLLAKATAGEA 360
Query: 229 NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDR 288
F+ + G + ++MF+G G VRD F LA++ +PCI+F+DEIDAIG KR G
Sbjct: 361 GVPFITVNGSEFLEMFVGVGPARVRDMFALARKNAPCILFVDEIDAIGRKRGRGHFGGQS 420
Query: 289 EVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARAR 348
E + T+ +LL ++DGF+S + V+A TNR D+LDPALMR GR DR+I P + R+
Sbjct: 421 EQENTLNQLLVEMDGFNSTTNVVVLAGTNRPDVLDPALMRPGRFDRQIYIGPPDIKGRSS 480
Query: 349 ILQIHSRKMNVHPDVNFEELARS----TDDF--NGAQLKAVCVEAGMLALRRDATEVNHE 402
I ++H R + + ++ + LAR T F +GA + VC EA ++A R V +
Sbjct: 481 IFRVHLRPLKLDESLSKDALARKLAALTPGFTGSGADISNVCNEAALIAARHLNPSVGEK 540
Query: 403 DFNEGIIQV 411
F + I +V
Sbjct: 541 HFEQAIERV 549
WARNING: HSPs involving 482 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.135 0.376 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 423 407 0.00078 118 3 11 22 0.42 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 732
No. of states in DFA: 568 (60 KB)
Total size of DFA: 208 KB (2117 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 35.07u 0.08s 35.15t Elapsed: 00:00:01
Total cpu time: 35.11u 0.08s 35.19t Elapsed: 00:00:01
Start: Sat May 11 03:05:16 2013 End: Sat May 11 03:05:17 2013
WARNINGS ISSUED: 2