BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014525
(423 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SEI2|PS6AA_ARATH 26S protease regulatory subunit 6A homolog A OS=Arabidopsis
thaliana GN=RPT5A PE=2 SV=1
Length = 424
Score = 824 bits (2128), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/424 (94%), Positives = 415/424 (97%), Gaps = 1/424 (0%)
Query: 1 MATAMVED-PNLEDDQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFKEKIKEN 59
MAT MVED + E+DQL+SM+ +DI RA+RLLDNEIR+LKE+ QRTNLE DS+KEKIKEN
Sbjct: 1 MATPMVEDTSSFEEDQLASMSTEDITRATRLLDNEIRILKEDAQRTNLECDSYKEKIKEN 60
Query: 60 QEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLP 119
QEKIKLNKQLPYLVGNIVEILEMNPED+AEEDGANIDLDSQRKGKCVVLKTSTRQTIFLP
Sbjct: 61 QEKIKLNKQLPYLVGNIVEILEMNPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLP 120
Query: 120 VVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQI 179
VVGLVDPD LKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQI
Sbjct: 121 VVGLVDPDSLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQI 180
Query: 180 QELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQ 239
QELVEAIVLPMTHKERF+KLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQ
Sbjct: 181 QELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQ 240
Query: 240 LVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLN 299
LVQMFIGDGAKLVRDAFQLAKEK+PCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLN
Sbjct: 241 LVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLN 300
Query: 300 QLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNV 359
QLDGFSSD+RIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNV
Sbjct: 301 QLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNV 360
Query: 360 HPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASL 419
HPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASL
Sbjct: 361 HPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASL 420
Query: 420 NYYA 423
NYYA
Sbjct: 421 NYYA 424
>sp|O23894|PRS6A_BRACM 26S protease regulatory subunit 6A homolog OS=Brassica campestris
GN=TBP1 PE=2 SV=1
Length = 424
Score = 823 bits (2127), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/424 (94%), Positives = 416/424 (98%), Gaps = 1/424 (0%)
Query: 1 MATAMVED-PNLEDDQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFKEKIKEN 59
MAT MVED + E+DQL+SM+ +DIVRA+RLL+NEIR+LKE+ QRTNLE DS+KEKIKEN
Sbjct: 1 MATPMVEDTSSFEEDQLASMSTEDIVRATRLLENEIRILKEDAQRTNLECDSYKEKIKEN 60
Query: 60 QEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLP 119
QEKIKLNKQLPYLVGNIVEILEMNPED+AEEDGANIDLDSQRKGKCVVLKTSTRQTIFLP
Sbjct: 61 QEKIKLNKQLPYLVGNIVEILEMNPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLP 120
Query: 120 VVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQI 179
VVGLVDPD LKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQI
Sbjct: 121 VVGLVDPDSLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQI 180
Query: 180 QELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQ 239
QELVEAIVLPMTHKERF+KLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQ
Sbjct: 181 QELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQ 240
Query: 240 LVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLN 299
LVQMFIGDGAKLVRDAFQLAKEK+PCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLN
Sbjct: 241 LVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLN 300
Query: 300 QLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNV 359
QLDGFSSD+RIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNV
Sbjct: 301 QLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNV 360
Query: 360 HPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASL 419
HPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASL
Sbjct: 361 HPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASL 420
Query: 420 NYYA 423
NYYA
Sbjct: 421 NYYA 424
>sp|P54776|PRS6A_SOLLC 26S protease regulatory subunit 6A homolog OS=Solanum lycopersicum
GN=TBP1 PE=2 SV=1
Length = 423
Score = 820 bits (2118), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/423 (95%), Positives = 415/423 (98%)
Query: 1 MATAMVEDPNLEDDQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFKEKIKENQ 60
MAT M ED N EDDQL +M+ +DI+RASRLLDNEIR++KEELQRTNLELDSFKEKIKENQ
Sbjct: 1 MATPMAEDSNFEDDQLHAMSTEDIIRASRLLDNEIRIIKEELQRTNLELDSFKEKIKENQ 60
Query: 61 EKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV 120
EKIKLNKQLPYLVGNIVEILEMNPE+EAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV
Sbjct: 61 EKIKLNKQLPYLVGNIVEILEMNPEEEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV 120
Query: 121 VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ 180
VGLVDPD LKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDY+DIGGLEKQIQ
Sbjct: 121 VGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYHDIGGLEKQIQ 180
Query: 181 ELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL 240
ELVEAIVLPMTH+ERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL
Sbjct: 181 ELVEAIVLPMTHQERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL 240
Query: 241 VQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300
VQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ
Sbjct: 241 VQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300
Query: 301 LDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVH 360
LDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNV+
Sbjct: 301 LDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVN 360
Query: 361 PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLN 420
PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEV HEDFNEGIIQVQAKKKASLN
Sbjct: 361 PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHEDFNEGIIQVQAKKKASLN 420
Query: 421 YYA 423
YYA
Sbjct: 421 YYA 423
>sp|O04019|PS6AB_ARATH 26S protease regulatory subunit 6A homolog B OS=Arabidopsis
thaliana GN=RPT5B PE=1 SV=3
Length = 423
Score = 814 bits (2103), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/423 (94%), Positives = 410/423 (96%)
Query: 1 MATAMVEDPNLEDDQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFKEKIKENQ 60
MATAM ED + E DQL+SMT DDI RASRLL NEIR+LKEE QRTNL+L+S KEKIKENQ
Sbjct: 1 MATAMAEDTSFEGDQLASMTTDDIGRASRLLANEIRILKEESQRTNLDLESVKEKIKENQ 60
Query: 61 EKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV 120
EKIKLNKQLPYLVGNIVEILEM+PED+AEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV
Sbjct: 61 EKIKLNKQLPYLVGNIVEILEMSPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV 120
Query: 121 VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ 180
VGLVDPD LKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ
Sbjct: 121 VGLVDPDTLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ 180
Query: 181 ELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL 240
ELVEAIVLPMTHKE+F+KLG+RPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL
Sbjct: 181 ELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL 240
Query: 241 VQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300
VQMFIGDGAKLVRDAF LAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ
Sbjct: 241 VQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300
Query: 301 LDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVH 360
LDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR RILQIHSRKMNV+
Sbjct: 301 LDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGRILQIHSRKMNVN 360
Query: 361 PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLN 420
DVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLN
Sbjct: 361 ADVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLN 420
Query: 421 YYA 423
YYA
Sbjct: 421 YYA 423
>sp|P46465|PRS6A_ORYSJ 26S protease regulatory subunit 6A homolog OS=Oryza sativa subsp.
japonica GN=TBP1 PE=2 SV=2
Length = 429
Score = 806 bits (2081), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/409 (95%), Positives = 406/409 (99%)
Query: 15 QLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFKEKIKENQEKIKLNKQLPYLVG 74
QL+SM+ +DIVRA+RLLDNE RVLK+ELQRTNLE++S+KEKIKENQEKIKLNKQLPYLVG
Sbjct: 21 QLASMSTEDIVRATRLLDNETRVLKDELQRTNLEVESYKEKIKENQEKIKLNKQLPYLVG 80
Query: 75 NIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDL 134
NIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV+GLVDP+KLKPGDL
Sbjct: 81 NIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVIGLVDPEKLKPGDL 140
Query: 135 VGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKE 194
VGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHK+
Sbjct: 141 VGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKD 200
Query: 195 RFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRD 254
RFQKLG+RPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRD
Sbjct: 201 RFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRD 260
Query: 255 AFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIA 314
AFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSD+RIKVIA
Sbjct: 261 AFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIA 320
Query: 315 ATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDD 374
ATNRADILDPALMRSGRLDRKIEFPHP+EEARARILQIHSRKMNV+PDVNFEELARSTDD
Sbjct: 321 ATNRADILDPALMRSGRLDRKIEFPHPSEEARARILQIHSRKMNVNPDVNFEELARSTDD 380
Query: 375 FNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 423
FNGAQLKAVCVEAGMLALRRDATEV HEDFNEGIIQVQAKKK+SLNYYA
Sbjct: 381 FNGAQLKAVCVEAGMLALRRDATEVTHEDFNEGIIQVQAKKKSSLNYYA 429
>sp|O88685|PRS6A_MOUSE 26S protease regulatory subunit 6A OS=Mus musculus GN=Psmc3 PE=1
SV=2
Length = 442
Score = 673 bits (1737), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/410 (77%), Positives = 371/410 (90%), Gaps = 1/410 (0%)
Query: 14 DQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFKEKIKENQEKIKLNKQLPYLV 73
+++ M+ ++IV+ +RLLD+EI+++K E+ R EL + K+KIKEN EKIK+NK LPYLV
Sbjct: 34 EEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLV 93
Query: 74 GNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGD 133
N++E+L+++P D+ EEDGANIDLDSQRKGKC V+KTSTRQT FLPV+GLVD +KLKPGD
Sbjct: 94 SNVIELLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGD 152
Query: 134 LVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHK 193
LVGVNKDSYLIL+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQIQELVEAIVLPM HK
Sbjct: 153 LVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHK 212
Query: 194 ERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVR 253
E+F+ LG++PPKGVL+YGPPGTGKTL+ARACAAQT ATFLKLAGPQLVQMFIGDGAKLVR
Sbjct: 213 EKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVR 272
Query: 254 DAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVI 313
DAF LAKEK+P IIFIDE+DAIGTKRFDSE +GDREVQRTMLELLNQLDGF + ++KVI
Sbjct: 273 DAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVI 332
Query: 314 AATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTD 373
AATNR DILDPAL+RSGRLDRKIEFP P EEARARI+QIHSRKMNV PDVN+EELAR TD
Sbjct: 333 AATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTD 392
Query: 374 DFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 423
DFNGAQ KAVCVEAGM+ALRR ATE+ HED+ EGI++VQAKKKA+L YYA
Sbjct: 393 DFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 442
>sp|P17980|PRS6A_HUMAN 26S protease regulatory subunit 6A OS=Homo sapiens GN=PSMC3 PE=1
SV=3
Length = 439
Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/410 (77%), Positives = 371/410 (90%), Gaps = 1/410 (0%)
Query: 14 DQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFKEKIKENQEKIKLNKQLPYLV 73
+++ M+ ++I++ +RLLD+EI+++K E+ R EL + K+KIKEN EKIK+NK LPYLV
Sbjct: 31 EEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLV 90
Query: 74 GNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGD 133
N++E+L+++P D+ EEDGANIDLDSQRKGKC V+KTSTRQT FLPV+GLVD +KLKPGD
Sbjct: 91 SNVIELLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGD 149
Query: 134 LVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHK 193
LVGVNKDSYLIL+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQIQELVEAIVLPM HK
Sbjct: 150 LVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHK 209
Query: 194 ERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVR 253
E+F+ LG++PPKGVL+YGPPGTGKTL+ARACAAQT ATFLKLAGPQLVQMFIGDGAKLVR
Sbjct: 210 EKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVR 269
Query: 254 DAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVI 313
DAF LAKEK+P IIFIDE+DAIGTKRFDSE +GDREVQRTMLELLNQLDGF + ++KVI
Sbjct: 270 DAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVI 329
Query: 314 AATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTD 373
AATNR DILDPAL+RSGRLDRKIEFP P EEARARI+QIHSRKMNV PDVN+EELAR TD
Sbjct: 330 AATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTD 389
Query: 374 DFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 423
DFNGAQ KAVCVEAGM+ALRR ATE+ HED+ EGI++VQAKKKA+L YYA
Sbjct: 390 DFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 439
>sp|Q63569|PRS6A_RAT 26S protease regulatory subunit 6A OS=Rattus norvegicus GN=Psmc3
PE=2 SV=1
Length = 439
Score = 672 bits (1735), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/410 (77%), Positives = 371/410 (90%), Gaps = 1/410 (0%)
Query: 14 DQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFKEKIKENQEKIKLNKQLPYLV 73
+++ M+ ++IV+ +RLLD+EI+++K E+ R EL + K+KIKEN EKIK+NK LPYLV
Sbjct: 31 EEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLV 90
Query: 74 GNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGD 133
N++E+L+++P D+ EEDGANIDLDSQRKGKC V+KTSTRQT FLPV+GLVD +KLKPGD
Sbjct: 91 SNVIELLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGD 149
Query: 134 LVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHK 193
LVGVNKDSYLIL+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQIQELVEAIVLPM HK
Sbjct: 150 LVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHK 209
Query: 194 ERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVR 253
E+F+ LG++PPKGVL+YGPPGTGKTL+ARACAAQT ATFLKLAGPQLVQMFIGDGAKLVR
Sbjct: 210 EKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVR 269
Query: 254 DAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVI 313
DAF LAKEK+P IIFIDE+DAIGTKRFDSE +GDREVQRTMLELLNQLDGF + ++KVI
Sbjct: 270 DAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVI 329
Query: 314 AATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTD 373
AATNR DILDPAL+RSGRLDRKIEFP P EEARARI+QIHSRKMNV PDVN+EELAR TD
Sbjct: 330 AATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTD 389
Query: 374 DFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 423
DFNGAQ KAVCVEAGM+ALRR ATE+ HED+ EGI++VQAKKKA+L YYA
Sbjct: 390 DFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 439
>sp|O42586|PR6AB_XENLA 26S protease regulatory subunit 6A-B OS=Xenopus laevis GN=psmc3-b
PE=2 SV=1
Length = 404
Score = 665 bits (1717), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/405 (77%), Positives = 366/405 (90%), Gaps = 1/405 (0%)
Query: 19 MTADDIVRASRLLDNEIRVLKEELQRTNLELDSFKEKIKENQEKIKLNKQLPYLVGNIVE 78
M+ ++I++ +RLLD+EI+++K E+ R EL + ++KIKEN EKIK+NK LPYLV N++E
Sbjct: 1 MSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMRDKIKENSEKIKVNKTLPYLVSNVIE 60
Query: 79 ILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVN 138
+L+++P D+ EEDGANIDLDSQRKGKC V+KTSTRQT FLPV+GLVD +KLKPGDLVGVN
Sbjct: 61 LLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVN 119
Query: 139 KDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQK 198
KDSYLIL+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQIQELVEAIVLPM HKE+F+
Sbjct: 120 KDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFEN 179
Query: 199 LGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQL 258
LG++PPKGVL+YGPPGTGKTL+ARACAAQT ATFLKLAGPQLVQMFIGDGAKLVRDAF L
Sbjct: 180 LGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFSL 239
Query: 259 AKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNR 318
AKEK+P IIFIDE+DAIG KRFDSE +GDREVQRTMLELLNQLDGF ++KVIAATNR
Sbjct: 240 AKEKAPSIIFIDELDAIGNKRFDSEKAGDREVQRTMLELLNQLDGFQPTTQVKVIAATNR 299
Query: 319 ADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGA 378
DILDPAL+RSGRLDRKIEFP P EEARARI+QIHSRKMNV PDVN+EELAR TDDFNGA
Sbjct: 300 VDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGA 359
Query: 379 QLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 423
Q KAVCVEAG++ALRR ATE+ HED+ EGI++VQAKKKA+L YYA
Sbjct: 360 QCKAVCVEAGIIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 404
>sp|Q54PN7|PRS6A_DICDI 26S protease regulatory subunit 6A homolog OS=Dictyostelium
discoideum GN=psmC3 PE=1 SV=1
Length = 421
Score = 620 bits (1600), Expect = e-177, Method: Compositional matrix adjust.
Identities = 299/410 (72%), Positives = 351/410 (85%), Gaps = 12/410 (2%)
Query: 14 DQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFKEKIKENQEKIKLNKQLPYLV 73
D++ MTAD++ R ++LL+NE +VL+ E +LE+DS +++IKEN +K+++N QLP+LV
Sbjct: 24 DEIFQMTADEVNRKAKLLENETKVLRSEHISKHLEMDSIQKRIKENNDKLQVNTQLPHLV 83
Query: 74 GNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGD 133
N+VEI++M + E + KCVV+K STRQTIFL G+VD DKL+PGD
Sbjct: 84 ANVVEIIDMVLDGETQ------------PSKCVVVKASTRQTIFLAYPGIVDVDKLRPGD 131
Query: 134 LVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHK 193
LVG+NKDSY+ILDTLP EYDSRVKAME+DEKPTE+Y+DIGGL+KQIQELVEA+VLPMTHK
Sbjct: 132 LVGINKDSYIILDTLPPEYDSRVKAMEIDEKPTEEYSDIGGLDKQIQELVEAVVLPMTHK 191
Query: 194 ERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVR 253
ERF+ +G++PPKGVL+YGPPGTGKTL+ARACAAQTN+T+LKLAGPQLVQMFIGDGAKLVR
Sbjct: 192 ERFESIGIKPPKGVLMYGPPGTGKTLLARACAAQTNSTYLKLAGPQLVQMFIGDGAKLVR 251
Query: 254 DAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVI 313
DAF LAKEK P IIFIDE+DAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSD IKVI
Sbjct: 252 DAFALAKEKGPTIIFIDELDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDANIKVI 311
Query: 314 AATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTD 373
AATNR DILDPAL+RSGRLDRKIEFP P EEARA ILQIHSRKMNV DVNF+ELARS++
Sbjct: 312 AATNRIDILDPALLRSGRLDRKIEFPLPNEEARAHILQIHSRKMNVSADVNFDELARSSE 371
Query: 374 DFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 423
DFNGAQLKAVCVEAGM+ALRR TE+ H DF EG ++V AKKK +L YYA
Sbjct: 372 DFNGAQLKAVCVEAGMIALRRGGTELIHNDFVEGCVEVMAKKKKTLEYYA 421
>sp|P33297|PRS6A_YEAST 26S protease regulatory subunit 6A OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RPT5 PE=1 SV=3
Length = 434
Score = 612 bits (1578), Expect = e-174, Method: Compositional matrix adjust.
Identities = 293/416 (70%), Positives = 356/416 (85%), Gaps = 5/416 (1%)
Query: 13 DDQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFKEKIKENQEKIKLNKQLPYL 72
D ++ +++ ++ ++LLDNEIR+ + ELQR + E + EKIK+N+EKIK N+QLPYL
Sbjct: 19 DQEILNLSTQELQTRAKLLDNEIRIFRSELQRLSHENNVMLEKIKDNKEKIKNNRQLPYL 78
Query: 73 VGNIVEILEMNP-ED----EAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPD 127
V N+VE+++MN ED E+ G N++LD+ GK V+KTS+RQT+FLP+VGLVDPD
Sbjct: 79 VANVVEVMDMNEIEDKENSESTTQGGNVNLDNTAVGKAAVVKTSSRQTVFLPMVGLVDPD 138
Query: 128 KLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIV 187
KLKP DLVGVNKDSYLILDTLPSE+DSRVKAMEVDEKPTE Y+D+GGL+KQI+ELVEAIV
Sbjct: 139 KLKPNDLVGVNKDSYLILDTLPSEFDSRVKAMEVDEKPTETYSDVGGLDKQIEELVEAIV 198
Query: 188 LPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGD 247
LPM ++F+ +G+R PKG L+YGPPGTGKTL+ARACAAQTNATFLKLA PQLVQM+IG+
Sbjct: 199 LPMKRADKFKDMGIRAPKGALMYGPPGTGKTLLARACAAQTNATFLKLAAPQLVQMYIGE 258
Query: 248 GAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSD 307
GAKLVRDAF LAKEK+P IIFIDE+DAIGTKRFDSE SGDREVQRTMLELLNQLDGFSSD
Sbjct: 259 GAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEKSGDREVQRTMLELLNQLDGFSSD 318
Query: 308 DRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEE 367
DR+KV+AATNR D+LDPAL+RSGRLDRKIEFP P+E++RA+ILQIHSRKM D+N++E
Sbjct: 319 DRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSEDSRAQILQIHSRKMTTDDDINWQE 378
Query: 368 LARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 423
LARSTD+FNGAQLKAV VEAGM+ALR + V HEDF EGI +VQA+K S+++YA
Sbjct: 379 LARSTDEFNGAQLKAVTVEAGMIALRNGQSSVKHEDFVEGISEVQARKSKSVSFYA 434
>sp|O14126|PRS6A_SCHPO 26S protease regulatory subunit 6A OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=tbp1 PE=3 SV=1
Length = 438
Score = 605 bits (1561), Expect = e-172, Method: Compositional matrix adjust.
Identities = 288/402 (71%), Positives = 345/402 (85%)
Query: 22 DDIVRASRLLDNEIRVLKEELQRTNLELDSFKEKIKENQEKIKLNKQLPYLVGNIVEILE 81
D++ +RLL+N+I+V+K E QR E + EKIKENQEKI NK LPYLVGN+VEIL+
Sbjct: 37 DELNSRTRLLENDIKVMKSEFQRLTHEKSTMLEKIKENQEKISNNKMLPYLVGNVVEILD 96
Query: 82 MNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDS 141
M P++ ++ AN + ++ R GK V+KTSTRQTIFLP++GLV+P++L PGDL+GVNKDS
Sbjct: 97 MQPDEVDVQESANQNSEATRVGKSAVIKTSTRQTIFLPLIGLVEPEELHPGDLIGVNKDS 156
Query: 142 YLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGV 201
YLI+D LPSEYDSRVKAMEVDEKPTE Y+DIGGL KQI+EL EAIVLPM ++F+KLGV
Sbjct: 157 YLIIDKLPSEYDSRVKAMEVDEKPTERYSDIGGLSKQIEELFEAIVLPMQQADKFRKLGV 216
Query: 202 RPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKE 261
+PPKG L++GPPGTGKTL+ARACAAQ+NATFLKLA PQLVQMFIGDGAKLVRDAF LAKE
Sbjct: 217 KPPKGCLMFGPPGTGKTLLARACAAQSNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKE 276
Query: 262 KSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADI 321
KSP IIFIDE+DAIGTKRFDSE +GDREVQRTMLELLNQLDGFSSDDR+KVIAATNR D
Sbjct: 277 KSPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSDDRVKVIAATNRVDT 336
Query: 322 LDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLK 381
LDPAL+RSGRLDRK+EFP P EEAR IL+IHSRKM + D+N+EELARSTD++NGA LK
Sbjct: 337 LDPALLRSGRLDRKLEFPLPNEEARVGILRIHSRKMAIDDDINWEELARSTDEYNGAMLK 396
Query: 382 AVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 423
+VCVEAGM+ALR+ T++NHE F +GI++VQ +K +L Y+A
Sbjct: 397 SVCVEAGMIALRQGDTKINHEHFMDGILEVQMRKSKTLQYFA 438
>sp|O42587|PR6AA_XENLA 26S protease regulatory subunit 6A-A OS=Xenopus laevis GN=psmc3-a
PE=2 SV=1
Length = 405
Score = 602 bits (1552), Expect = e-171, Method: Compositional matrix adjust.
Identities = 291/392 (74%), Positives = 341/392 (86%), Gaps = 2/392 (0%)
Query: 14 DQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFKEKIKENQEKIKLNKQLPYLV 73
+++ M+ ++I++ +RLLD+EI+++K E+ R EL + ++KIKEN EKIK+NK LPYLV
Sbjct: 15 EEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMRDKIKENSEKIKVNKTLPYLV 74
Query: 74 GNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGD 133
N++E+L+++P D+ EEDGANIDLDSQRKGKC V+KTSTRQT FLPV+GLVD +KLKPGD
Sbjct: 75 SNVIELLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGD 133
Query: 134 LVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHK 193
LVGVNKDSYLIL+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQIQELVEAIVLPM HK
Sbjct: 134 LVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHK 193
Query: 194 ERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVR 253
E+F+ LG++PPKGVL+YGPPGTGKTL+ARACAAQT ATFLKLAGPQLVQMFIGDGAKLVR
Sbjct: 194 EKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVR 253
Query: 254 DAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVI 313
DAF LAKEK+P IIFIDE+DAIGTKRFDSE +GDREVQRTMLELLNQLDGF + ++KVI
Sbjct: 254 DAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNMQVKVI 313
Query: 314 AATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTD 373
AATNR DILDPAL+RSGRLDRKIEFP P EEARARI+QIHSRKMNV PDVN+EELAR
Sbjct: 314 AATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCPT 373
Query: 374 DFNGAQLKAVCVEAGMLALRRDATEVNHEDFN 405
K VEAGM+ALRR ATE +FN
Sbjct: 374 ISMALSAKQFGVEAGMIALRRGATEFGL-NFN 404
>sp|Q8SR13|PRS6A_ENCCU 26S protease regulatory subunit 6A OS=Encephalitozoon cuniculi
(strain GB-M1) GN=RPT5 PE=1 SV=1
Length = 401
Score = 492 bits (1266), Expect = e-138, Method: Compositional matrix adjust.
Identities = 241/397 (60%), Positives = 303/397 (76%), Gaps = 23/397 (5%)
Query: 29 RLLDNEIRVLKEELQRTNLELDSFKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEA 88
R+L++E R+L+ + ++ + I EN E+I+LNKQLPYLVGN+VE+L+
Sbjct: 26 RMLNSETRILQSRVNTIKHDISTKNASIAENMERIRLNKQLPYLVGNVVEVLD------- 78
Query: 89 EEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTL 148
E G V+ STR + +LP+ GL+ +L+PGDLV ++KD+ ++ + L
Sbjct: 79 EHSG--------------VVNASTRMSSYLPITGLIPNSELRPGDLVALHKDTNIVFEKL 124
Query: 149 PSEYDSRVKAM--EVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKG 206
P +YD +V M + D KP E Y DIGGLE+QI+EL EAIVL +TH ERF+KL ++PPKG
Sbjct: 125 PPDYDMKVGGMVLKSDAKPDETYEDIGGLERQIEELNEAIVLSLTHPERFEKLNIKPPKG 184
Query: 207 VLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCI 266
VL+YGPPGTGKTLMARACA++TNATFLKLAGPQLVQM+IGDGA+LVRDAF LAKE+ P I
Sbjct: 185 VLMYGPPGTGKTLMARACASKTNATFLKLAGPQLVQMYIGDGARLVRDAFALAKERKPTI 244
Query: 267 IFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPAL 326
IFIDEIDAIG KR DS+ +GDREVQRTMLELLNQLDGFSS + +K+IAATNR DILDPAL
Sbjct: 245 IFIDEIDAIGAKRSDSDQTGDREVQRTMLELLNQLDGFSSSEEVKIIAATNRVDILDPAL 304
Query: 327 MRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVE 386
+RSGRLDRKIEFP P R RILQIH+RKM+V DVNF+ELARST+ FNGAQ KAVCVE
Sbjct: 305 LRSGRLDRKIEFPLPNTLGRKRILQIHARKMSVRDDVNFDELARSTEGFNGAQCKAVCVE 364
Query: 387 AGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 423
AGM ALR++ TE++ DF +GI +V ++KK+ L Y+
Sbjct: 365 AGMAALRKEKTEISQNDFMDGIQEVLSRKKSKLLYFT 401
>sp|Q58576|PAN_METJA Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=pan PE=1 SV=1
Length = 430
Score = 353 bits (905), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 171/317 (53%), Positives = 228/317 (71%), Gaps = 3/317 (0%)
Query: 92 GANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSE 151
G +D +RK VV+K+ST + + V V+PD L PG V +N+ + ++D LP
Sbjct: 95 GTVVDKVGERK---VVVKSSTGPSFLVNVSHFVNPDDLAPGKRVCLNQQTLTVVDVLPEN 151
Query: 152 YDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYG 211
D R KAMEVDE+P Y DIGGLEKQ+QE+ E + LP+ H E F+K+G+ PPKG+LLYG
Sbjct: 152 KDYRAKAMEVDERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYG 211
Query: 212 PPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDE 271
PPGTGKTL+A+A A +TNATF+++ G +LV+ FIG+GA LV+D F+LAKEK+P IIFIDE
Sbjct: 212 PPGTGKTLLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDE 271
Query: 272 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGR 331
IDAI KR D+ GDREVQRT+++LL ++DGF + +K+I ATNR DILDPA++R GR
Sbjct: 272 IDAIAAKRTDALTGGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGR 331
Query: 332 LDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLA 391
DR IE P P E+ R IL+IH+RKMN+ DVN EE+A+ T+ GA+LKA+C EAGM A
Sbjct: 332 FDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNA 391
Query: 392 LRRDATEVNHEDFNEGI 408
+R V +DF + +
Sbjct: 392 IRELRDYVTMDDFRKAV 408
>sp|Q8TX03|PAN_METKA Proteasome-activating nucleotidase OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=pan PE=3
SV=1
Length = 436
Score = 352 bits (902), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 187/379 (49%), Positives = 257/379 (67%), Gaps = 28/379 (7%)
Query: 38 LKEELQRTNLELDSFKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDL 97
L+EEL+R + + EK++ + +++K + P +VG + EIL+ DG
Sbjct: 75 LREELRRKEVMI----EKLRSDLQRMK---KPPLIVGTVEEILD---------DGR---- 114
Query: 98 DSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVK 157
V++K+ST V VD ++L+PG V +N+ S ++D LPSE DSRV
Sbjct: 115 --------VIVKSSTGPKFVSNVSPTVDRNELEPGANVALNQQSMAVVDVLPSEKDSRVL 166
Query: 158 AMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGK 217
AMEVDE P Y+DIGGL++QI+E+ E + P+ E F+K+GV PPKGVLLYGPPGTGK
Sbjct: 167 AMEVDESPDVSYDDIGGLDEQIREIREVVEKPLKEPELFEKVGVEPPKGVLLYGPPGTGK 226
Query: 218 TLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGT 277
TL+A+A A +ATF++LA P+LVQ FIG+GA+LVR+ F+LA+EK+P IIFIDEIDAIG
Sbjct: 227 TLLAKAVANHADATFIRLAAPELVQKFIGEGARLVRELFELAREKAPSIIFIDEIDAIGA 286
Query: 278 KRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIE 337
+R SGDREVQRT+ +LL ++DGF D IKVIAATNR DILDPAL+R GR DR I+
Sbjct: 287 RRMRDATSGDREVQRTLTQLLAEMDGFDPLDDIKVIAATNRKDILDPALLRPGRFDRHIK 346
Query: 338 FPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDAT 397
P P EE R I +IH+R MN+ DV+ ++LA+ T+ +GA +KA+C EAGM+A+R D
Sbjct: 347 IPLPDEEGRYEIFKIHTRDMNLAEDVDLQKLAKITEGASGADIKAICTEAGMMAIREDRD 406
Query: 398 EVNHEDFNEGIIQVQAKKK 416
V +DF + + +V KK+
Sbjct: 407 IVTMDDFLKAVDRVMGKKE 425
>sp|Q9YAC7|PAN_AERPE Proteasome-activating nucleotidase OS=Aeropyrum pernix (strain ATCC
700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=pan
PE=3 SV=1
Length = 409
Score = 344 bits (882), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 178/382 (46%), Positives = 255/382 (66%), Gaps = 21/382 (5%)
Query: 32 DNEIRVLKEELQRTNLELDSFKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEED 91
D EIR+LK++++ E S +++++ + +I PY+ ++E+++ N
Sbjct: 22 DVEIRILKDKVRSLTKEKISLQKELEYYKNEITKLLSPPYIEAVVLEVIDDN-------- 73
Query: 92 GANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSE 151
VV+K+ST + + V VD LKPG +V +N I+D LP
Sbjct: 74 -------------RVVVKSSTGPNLIVNVAAGVDARSLKPGAIVALNNRGSTIVDVLPGR 120
Query: 152 YDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYG 211
YD VKAMEV+E+P + D+GGLE+QI+E+ EA+VLP+ + F++LG+ PPKGVLL+G
Sbjct: 121 YDPLVKAMEVEERPKVFFKDVGGLEEQIREIYEAVVLPIKNPHLFRELGIDPPKGVLLHG 180
Query: 212 PPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDE 271
PPGTGKTL+A+A A +T ATF+++ G +LV FIG+GA+LVR+ F+LA+EK+P I+FIDE
Sbjct: 181 PPGTGKTLLAKAVAGETEATFIRVVGSELVNKFIGEGARLVREIFRLAREKAPSILFIDE 240
Query: 272 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGR 331
IDAI +KR D SGDREVQRTML+LL +LDGF D +KVIAATNR D++DPA++R GR
Sbjct: 241 IDAIASKRVDIGTSGDREVQRTMLQLLAELDGFDPLDNVKVIAATNRLDLIDPAVLRPGR 300
Query: 332 LDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLA 391
DR IE P P+ R IL IH+RK + PDV+ E +A+ T+ F+GA LKAV VEAG A
Sbjct: 301 FDRIIEVPLPSLRGRLEILGIHTRKAKMAPDVDLEAIAKLTEGFSGADLKAVVVEAGYNA 360
Query: 392 LRRDATEVNHEDFNEGIIQVQA 413
+RR + + +D + + +V+A
Sbjct: 361 IRRGSRVITMDDMIKAVEKVKA 382
>sp|P62193|PRS4_RAT 26S protease regulatory subunit 4 OS=Rattus norvegicus GN=Psmc1
PE=2 SV=1
Length = 440
Score = 344 bits (882), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 172/380 (45%), Positives = 251/380 (66%), Gaps = 21/380 (5%)
Query: 37 VLKEELQRTNLELDSFKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANID 96
+++EE R ++ +EK +E + K+ + P VG + EI++ N
Sbjct: 73 LMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDN------------- 119
Query: 97 LDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRV 156
++ TS ++ ++ VD D L+PG V +N + ++ L + D V
Sbjct: 120 --------HAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLV 171
Query: 157 KAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTG 216
M+V++ P E Y DIGGL+ QIQE+ E++ LP+TH E ++++G++PPKGV+LYGPPGTG
Sbjct: 172 TVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTG 231
Query: 217 KTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIG 276
KTL+A+A A QT+ATFL++ G +L+Q ++GDG KLVR+ F++A+E +P I+FIDEIDAIG
Sbjct: 232 KTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIG 291
Query: 277 TKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKI 336
TKR+DS G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKI
Sbjct: 292 TKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKI 351
Query: 337 EFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA 396
EFP P E+ + RI QIH+ +M + DV ++L + DD +GA +KA+C EAG++ALR
Sbjct: 352 EFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERR 411
Query: 397 TEVNHEDFNEGIIQVQAKKK 416
+V +EDF + V KK+
Sbjct: 412 MKVTNEDFKKSKENVLYKKQ 431
>sp|P62192|PRS4_MOUSE 26S protease regulatory subunit 4 OS=Mus musculus GN=Psmc1 PE=1
SV=1
Length = 440
Score = 344 bits (882), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 172/380 (45%), Positives = 251/380 (66%), Gaps = 21/380 (5%)
Query: 37 VLKEELQRTNLELDSFKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANID 96
+++EE R ++ +EK +E + K+ + P VG + EI++ N
Sbjct: 73 LMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDN------------- 119
Query: 97 LDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRV 156
++ TS ++ ++ VD D L+PG V +N + ++ L + D V
Sbjct: 120 --------HAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLV 171
Query: 157 KAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTG 216
M+V++ P E Y DIGGL+ QIQE+ E++ LP+TH E ++++G++PPKGV+LYGPPGTG
Sbjct: 172 TVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTG 231
Query: 217 KTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIG 276
KTL+A+A A QT+ATFL++ G +L+Q ++GDG KLVR+ F++A+E +P I+FIDEIDAIG
Sbjct: 232 KTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIG 291
Query: 277 TKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKI 336
TKR+DS G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKI
Sbjct: 292 TKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKI 351
Query: 337 EFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA 396
EFP P E+ + RI QIH+ +M + DV ++L + DD +GA +KA+C EAG++ALR
Sbjct: 352 EFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERR 411
Query: 397 TEVNHEDFNEGIIQVQAKKK 416
+V +EDF + V KK+
Sbjct: 412 MKVTNEDFKKSKENVLYKKQ 431
>sp|P62191|PRS4_HUMAN 26S protease regulatory subunit 4 OS=Homo sapiens GN=PSMC1 PE=1
SV=1
Length = 440
Score = 344 bits (882), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 172/380 (45%), Positives = 251/380 (66%), Gaps = 21/380 (5%)
Query: 37 VLKEELQRTNLELDSFKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANID 96
+++EE R ++ +EK +E + K+ + P VG + EI++ N
Sbjct: 73 LMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDN------------- 119
Query: 97 LDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRV 156
++ TS ++ ++ VD D L+PG V +N + ++ L + D V
Sbjct: 120 --------HAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLV 171
Query: 157 KAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTG 216
M+V++ P E Y DIGGL+ QIQE+ E++ LP+TH E ++++G++PPKGV+LYGPPGTG
Sbjct: 172 TVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTG 231
Query: 217 KTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIG 276
KTL+A+A A QT+ATFL++ G +L+Q ++GDG KLVR+ F++A+E +P I+FIDEIDAIG
Sbjct: 232 KTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIG 291
Query: 277 TKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKI 336
TKR+DS G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKI
Sbjct: 292 TKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKI 351
Query: 337 EFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA 396
EFP P E+ + RI QIH+ +M + DV ++L + DD +GA +KA+C EAG++ALR
Sbjct: 352 EFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERR 411
Query: 397 TEVNHEDFNEGIIQVQAKKK 416
+V +EDF + V KK+
Sbjct: 412 MKVTNEDFKKSKENVLYKKQ 431
>sp|P48601|PRS4_DROME 26S protease regulatory subunit 4 OS=Drosophila melanogaster
GN=Pros26.4 PE=2 SV=2
Length = 439
Score = 343 bits (881), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 172/380 (45%), Positives = 250/380 (65%), Gaps = 21/380 (5%)
Query: 37 VLKEELQRTNLELDSFKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANID 96
++++E R L EK +E + K+ + P VGN+ EI++ N
Sbjct: 72 MMEDEFIRNQERLKPQDEKNEEERSKVDDLRGTPMSVGNLEEIIDDN------------- 118
Query: 97 LDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRV 156
++ TS ++ ++ VD D+L+PG V +N + ++ L + D V
Sbjct: 119 --------HAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMV 170
Query: 157 KAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTG 216
M++++ P E Y DIGGL+ QIQE+ E++ LP+TH E ++++G++PPKGV+LYGPPGTG
Sbjct: 171 TVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTG 230
Query: 217 KTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIG 276
KTL+A+A A QT+ATFL++ G +L+Q ++GDG KLVR+ F++A+E +P I+FIDEIDA+G
Sbjct: 231 KTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVG 290
Query: 277 TKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKI 336
TKR+DS G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKI
Sbjct: 291 TKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKI 350
Query: 337 EFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA 396
EFP P E+ + RI IH+ +M + DVN EL + DD +GA +KA+C EAG++ALR
Sbjct: 351 EFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERR 410
Query: 397 TEVNHEDFNEGIIQVQAKKK 416
+V +EDF + V +KK
Sbjct: 411 MKVTNEDFKKSKESVLYRKK 430
>sp|A3CV35|PAN_METMJ Proteasome-activating nucleotidase OS=Methanoculleus marisnigri
(strain ATCC 35101 / DSM 1498 / JR1) GN=pan PE=3 SV=1
Length = 412
Score = 343 bits (879), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 163/303 (53%), Positives = 221/303 (72%)
Query: 106 VVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP 165
V++++S + L+DPD LKPG +N+ S I+D LP+ YD+++ ME+ E P
Sbjct: 89 VIVRSSAGPRFLVRTSQLIDPDLLKPGVRCTLNQQSLAIVDVLPTSYDAQIYGMELVESP 148
Query: 166 TEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 225
E Y +IGGLE QI+E+ EA+ LP+T + F+K+G+ PPKGVLLYGPPGTGKTL+ARA A
Sbjct: 149 EETYENIGGLEPQIEEIREAVELPLTKPQLFEKVGISPPKGVLLYGPPGTGKTLLARAVA 208
Query: 226 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVS 285
QTNA FL++ G +LVQ +IG+GA+LVR+ F LAK+++P IIFIDEIDAIG R DS S
Sbjct: 209 HQTNAHFLRVVGSELVQKYIGEGARLVRELFDLAKQRAPSIIFIDEIDAIGAHRNDSTTS 268
Query: 286 GDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEA 345
GDREVQRT+++LL ++DGF + +K++AATNR DILD AL+R GR DR IE P P +
Sbjct: 269 GDREVQRTLMQLLAEMDGFDNRGDVKIVAATNRIDILDRALLRPGRFDRMIEIPLPDHQG 328
Query: 346 RARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFN 405
R IL+IH++ MN+ DVN E++R T+ NGA L+A+C+EAGM A+R + VN EDF
Sbjct: 329 RLAILKIHTQYMNIGEDVNLSEVSRLTEGKNGADLRAICMEAGMFAIRMERDAVNSEDFM 388
Query: 406 EGI 408
+ I
Sbjct: 389 KAI 391
>sp|Q90732|PRS4_CHICK 26S protease regulatory subunit 4 OS=Gallus gallus GN=PSMC1 PE=2
SV=1
Length = 440
Score = 342 bits (878), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 169/370 (45%), Positives = 246/370 (66%), Gaps = 21/370 (5%)
Query: 37 VLKEELQRTNLELDSFKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANID 96
+++EE R ++ +EK +E + K+ + P VG + EI++ N
Sbjct: 73 LMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDN------------- 119
Query: 97 LDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRV 156
++ TS ++ ++ VD D L+PG V +N + ++ L + D V
Sbjct: 120 --------HAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLV 171
Query: 157 KAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTG 216
M++++ P E Y DIGGL+ QIQE+ E++ LP+TH E ++++G++PPKGV+LYGPPGTG
Sbjct: 172 TVMKLEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTG 231
Query: 217 KTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIG 276
KTL+A+A A QT+ATFL++ G +L+Q ++GDG KLVR+ F++A+E P I+FIDEIDAIG
Sbjct: 232 KTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIG 291
Query: 277 TKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKI 336
TKR+DS G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKI
Sbjct: 292 TKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKI 351
Query: 337 EFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA 396
EFP P E+ + RI QIH+ +M + DV +EL + DD +GA +KA+C EAG++ALR
Sbjct: 352 EFPLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERR 411
Query: 397 TEVNHEDFNE 406
+V +EDF +
Sbjct: 412 MKVTNEDFKK 421
>sp|Q9SZD4|PRS4A_ARATH 26S proteasome regulatory subunit 4 homolog A OS=Arabidopsis
thaliana GN=RPT2A PE=2 SV=1
Length = 443
Score = 340 bits (872), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 173/380 (45%), Positives = 247/380 (65%), Gaps = 21/380 (5%)
Query: 37 VLKEELQRTNLELDSFKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANID 96
+++EE L +EK +E++ K+ + P VGN+ E+++ N
Sbjct: 76 LMEEEFVANQERLKPQEEKAEEDRSKVDDLRGTPMSVGNLEELIDEN------------- 122
Query: 97 LDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRV 156
++ +S ++ ++ VD D+L+PG + ++ ++ L E D V
Sbjct: 123 --------HAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMV 174
Query: 157 KAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTG 216
M+V++ P E Y DIGGLE QIQE+ EA+ LP+TH E ++ +G++PPKGV+LYG PGTG
Sbjct: 175 SVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTG 234
Query: 217 KTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIG 276
KTL+A+A A T+ATFL++ G +L+Q ++GDG KLVR+ F++A + SP I+FIDEIDA+G
Sbjct: 235 KTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVG 294
Query: 277 TKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKI 336
TKR+D+ G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKI
Sbjct: 295 TKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKI 354
Query: 337 EFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA 396
EFP P + R RI QIH+ KM + DVN EE + D+F+GA +KA+C EAG+LALR
Sbjct: 355 EFPLPDIKTRRRIFQIHTSKMTLSEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERR 414
Query: 397 TEVNHEDFNEGIIQVQAKKK 416
+V H DF + +V KKK
Sbjct: 415 MKVTHPDFKKAKEKVMFKKK 434
>sp|Q9SL67|PRS4B_ARATH 26S proteasome regulatory subunit 4 homolog B OS=Arabidopsis
thaliana GN=RPT2B PE=2 SV=1
Length = 443
Score = 339 bits (870), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 173/380 (45%), Positives = 247/380 (65%), Gaps = 21/380 (5%)
Query: 37 VLKEELQRTNLELDSFKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANID 96
+++EE L +EK +E++ K+ + P VGN+ E+++ N
Sbjct: 76 LMEEEFVANQERLKPQEEKAEEDRSKVDDLRGTPMSVGNLEELIDEN------------- 122
Query: 97 LDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRV 156
++ +S ++ ++ VD D+L+PG + ++ ++ L E D V
Sbjct: 123 --------HAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMV 174
Query: 157 KAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTG 216
M+V++ P E Y DIGGLE QIQE+ EA+ LP+TH E ++ +G++PPKGV+LYG PGTG
Sbjct: 175 SVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTG 234
Query: 217 KTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIG 276
KTL+A+A A T+ATFL++ G +L+Q ++GDG KLVR+ F++A + SP I+FIDEIDA+G
Sbjct: 235 KTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVG 294
Query: 277 TKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKI 336
TKR+D+ G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKI
Sbjct: 295 TKRYDANSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKI 354
Query: 337 EFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA 396
EFP P + R RI QIH+ KM + DVN EE + D+F+GA +KA+C EAG+LALR
Sbjct: 355 EFPLPDIKTRRRIFQIHTSKMTLAEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERR 414
Query: 397 TEVNHEDFNEGIIQVQAKKK 416
+V H DF + +V KKK
Sbjct: 415 MKVTHVDFKKAKEKVMFKKK 434
>sp|P46466|PRS4_ORYSJ 26S protease regulatory subunit 4 homolog OS=Oryza sativa subsp.
japonica GN=TBP2 PE=2 SV=2
Length = 448
Score = 338 bits (867), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 174/380 (45%), Positives = 248/380 (65%), Gaps = 21/380 (5%)
Query: 37 VLKEELQRTNLELDSFKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANID 96
+++EE L ++K +E++ K+ + P VG++ EI+ DE+
Sbjct: 81 LMEEEFVAAQERLRPTEDKTEEDRSKVDDLRGTPMSVGSLEEII-----DESH------- 128
Query: 97 LDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRV 156
++ +S ++ ++ VD D+L+PG + ++ ++ L E D V
Sbjct: 129 ---------AIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMV 179
Query: 157 KAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTG 216
M+V++ P E Y DIGGL+ QIQE+ EA+ LP+TH E ++ +G+RPPKGV+LYG PGTG
Sbjct: 180 SVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTG 239
Query: 217 KTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIG 276
KTL+A+A A T+ATFL++ G +L+Q ++GDG KLVR+ F++A E SP I+FIDEIDA+G
Sbjct: 240 KTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADELSPSIVFIDEIDAVG 299
Query: 277 TKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKI 336
TKR+D+ G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKI
Sbjct: 300 TKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKI 359
Query: 337 EFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA 396
EFP P + R RI QIH+ KM + DVN EE + D+F+GA +KA+C EAG+LALR
Sbjct: 360 EFPLPDIKTRRRIFQIHTSKMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERR 419
Query: 397 TEVNHEDFNEGIIQVQAKKK 416
+V H DF + +V KKK
Sbjct: 420 MKVTHADFKKAKEKVMFKKK 439
>sp|Q2FQ56|PAN_METHJ Proteasome-activating nucleotidase OS=Methanospirillum hungatei
(strain JF-1 / DSM 864) GN=pan PE=3 SV=1
Length = 412
Score = 338 bits (867), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 176/374 (47%), Positives = 246/374 (65%), Gaps = 21/374 (5%)
Query: 31 LDNEIRVLKEELQRTNLELDSFKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEE 90
L +IR L+ + + + ++ ++++ + +I+ K P +VG I +I+
Sbjct: 35 LKEQIRQLESDKRYIETQKIRYEREVRKLKSEIEHLKTPPLIVGTITDII---------- 84
Query: 91 DGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPS 150
DS R VV+++S + V V+P LK G +N+ S I++ LPS
Sbjct: 85 -------DSGR----VVVRSSAGPRFLVRVSQAVNPTTLKAGVRCTLNQQSLAIVEVLPS 133
Query: 151 EYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLY 210
YDS+V ME+ + PTE Y DIGGLEKQI E+ EA+ LPMT + F+K+G+ PPKGVLLY
Sbjct: 134 TYDSQVYGMELVDAPTETYEDIGGLEKQIMEIREAVELPMTRPDLFEKIGINPPKGVLLY 193
Query: 211 GPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFID 270
GPPGTGKTL+A+A A +T+A FL G +LVQ +IG+GA+LVR+ F LAKEK+P I+FID
Sbjct: 194 GPPGTGKTLLAKAVAHETHAIFLHTVGSELVQKYIGEGARLVRELFDLAKEKAPSIVFID 253
Query: 271 EIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSG 330
EIDAIG R ++ SGDREVQRT+++LL +DGF +K+I ATNR DILD AL+R G
Sbjct: 254 EIDAIGASRTEAMTSGDREVQRTLMQLLAAMDGFEPRGDVKIIGATNRIDILDAALLRPG 313
Query: 331 RLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGML 390
R DR IE P P E R IL++H+R MN+ DV+ E+AR T+ NGA+L A+C+EAGM
Sbjct: 314 RFDRIIEIPLPDTEGRYSILKVHTRCMNLSEDVDLMEVARLTEGRNGAELNAICMEAGMF 373
Query: 391 ALRRDATEVNHEDF 404
A+R++ +V+ EDF
Sbjct: 374 AIRKEHPQVDQEDF 387
>sp|Q0W257|PAN_UNCMA Proteasome-activating nucleotidase OS=Uncultured methanogenic
archaeon RC-I GN=pan PE=3 SV=1
Length = 417
Score = 337 bits (865), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 181/401 (45%), Positives = 260/401 (64%), Gaps = 29/401 (7%)
Query: 26 RASRLLDNEIRVLKEELQRTNLELDSFK-EKIKENQEKIKLNKQL------PYLVGNIVE 78
R +L + +R LKEE ++ LE S + +K++ +E KL +L P +VG I++
Sbjct: 30 RVKQLEERNVR-LKEEYRKIELEKKSVENKKVQYEREIRKLTSELDRLKTPPLIVGTILD 88
Query: 79 ILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVN 138
++ AN GK ++ K+ST + ++ ++ PG V +N
Sbjct: 89 VM------------AN--------GKMII-KSSTGPKFVVNSSQFINSKEVYPGAKVALN 127
Query: 139 KDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQK 198
+ S +++ LP+ D V MEV + P DY IGGLE QI EL E + LP+ E FQK
Sbjct: 128 QQSLAVIEVLPTVKDPSVLGMEVVDSPEIDYQSIGGLEAQINELKETVELPLLKPELFQK 187
Query: 199 LGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQL 258
+G+ PPKGVLLYGPPGTGKTL+A+A A +T ATF+++ G +LVQ +IG+GA++VR+ F+L
Sbjct: 188 VGIEPPKGVLLYGPPGTGKTLLAKAVANRTKATFIRIIGSELVQKYIGEGARMVRELFEL 247
Query: 259 AKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNR 318
AKEKSP IIFIDEID+IG KR DS SGDREVQRT+++LL ++DGF ++++AATNR
Sbjct: 248 AKEKSPSIIFIDEIDSIGAKRLDSITSGDREVQRTLVQLLAEMDGFDPRGNVRILAATNR 307
Query: 319 ADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGA 378
DILDPAL+R GR DR I+ P PT EAR +IL+IH+RKMN+ DV+ ++A TD+ +GA
Sbjct: 308 PDILDPALLRPGRFDRMIKVPMPTAEAREQILKIHARKMNLADDVDLRKIALITDESSGA 367
Query: 379 QLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASL 419
L A+ +EAGM A+R + V+ DFN + +V ++ S+
Sbjct: 368 DLSAIVMEAGMFAIRNNRDVVDSSDFNAAVAKVMGERNRSM 408
>sp|Q55BV5|PRS4_DICDI 26S protease regulatory subunit 4 homolog OS=Dictyostelium
discoideum GN=psmC1 PE=1 SV=1
Length = 439
Score = 337 bits (864), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 158/302 (52%), Positives = 219/302 (72%)
Query: 117 FLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLE 176
++ ++ VD KL G V +N + ++ + E D V M+V++ PTE Y+DIGGLE
Sbjct: 131 YVRIMSFVDKSKLYLGATVLLNNKTLSVVGVIDGEVDPMVNVMKVEKAPTESYSDIGGLE 190
Query: 177 KQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLA 236
Q+QE+ EAI LP+TH E ++++G++PPKGV+LYG PGTGKTL+A+A A QT+ATFL++
Sbjct: 191 AQVQEMKEAIELPLTHPELYEEIGIKPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVV 250
Query: 237 GPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLE 296
G +L+Q ++GDG KLVR+ F++A E +P I+FIDEIDA+GTKR+DS+ G+RE+QRTMLE
Sbjct: 251 GSELIQKYLGDGPKLVRELFRVADECAPSIVFIDEIDAVGTKRYDSQSGGEREIQRTMLE 310
Query: 297 LLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRK 356
LLNQLDGF + +KVI ATNR + LDPAL+R GR+DRKIEFP P + + +I +IH+ K
Sbjct: 311 LLNQLDGFDARTDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDIKTKRKIFEIHTAK 370
Query: 357 MNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 416
MN+ DVN EE S DD +GA +KA+C E+G+LALR V H DF + +V +K
Sbjct: 371 MNLSEDVNLEEFVMSKDDLSGADIKAICTESGLLALRERRMRVTHTDFKKAKEKVLYRKT 430
Query: 417 AS 418
A
Sbjct: 431 AG 432
>sp|A4G0S4|PAN_METM5 Proteasome-activating nucleotidase OS=Methanococcus maripaludis
(strain C5 / ATCC BAA-1333) GN=pan PE=3 SV=1
Length = 407
Score = 337 bits (863), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 166/324 (51%), Positives = 229/324 (70%), Gaps = 4/324 (1%)
Query: 92 GANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSE 151
G +D ++RK V+K+ST + + VDPD + PG V +N+ + I++ LP E
Sbjct: 73 GTILDRVNERKA---VVKSSTGPNFLVNLSQFVDPDDIVPGARVCLNQQTLAIVEVLPKE 129
Query: 152 YDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYG 211
D R AME++EKP + DIGGL QI+++ E + LP+ + E F+K+G+ PPKGVLLYG
Sbjct: 130 KDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYG 189
Query: 212 PPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDE 271
PPGTGKTL+A+A A +TNA+F+++ G +LV+ FIG+GAKLVRD F+LAKEKSPCIIFIDE
Sbjct: 190 PPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDE 249
Query: 272 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGR 331
IDA+ +KR +S GDREVQRT+++LL ++DGF S +K+IAATNR DILDPA++R GR
Sbjct: 250 IDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGR 309
Query: 332 LDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLA 391
DR IE P E+ R IL+IH+ KMN+ V+ E+A+ ++ GA LKAVC EAGM A
Sbjct: 310 FDRIIEISMPDEDGRLDILKIHTEKMNLK-GVDLREVAKIAENMVGADLKAVCTEAGMFA 368
Query: 392 LRRDATEVNHEDFNEGIIQVQAKK 415
+R + + +DF E I ++ KK
Sbjct: 369 IREEREFIKMDDFREAITKITGKK 392
>sp|O28303|PAN_ARCFU Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus
(strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC
100126) GN=pan PE=1 SV=1
Length = 398
Score = 336 bits (861), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 176/379 (46%), Positives = 249/379 (65%), Gaps = 21/379 (5%)
Query: 36 RVLKEELQRTNLELDSFKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANI 95
R L++E + E ++ +++ + +++ + P LVG + +ILE DG
Sbjct: 28 RRLEDEKKFIESERIRYEREVRRLRSEVERLRSPPLLVGVVSDILE---------DGR-- 76
Query: 96 DLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSR 155
VV+K+ST + ++ ++LKPG V +N+ + I++ LP+ D
Sbjct: 77 ----------VVVKSSTGPKFVVNTSQYINEEELKPGARVALNQQTLAIVNVLPTSKDPM 126
Query: 156 VKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGT 215
V EV+EKP Y DIGGL+ QI+E+ EA+ LP+ E F ++G+ PPKGVLLYGPPGT
Sbjct: 127 VYGFEVEEKPEVSYEDIGGLDVQIEEIREAVELPLLKPELFAEVGIEPPKGVLLYGPPGT 186
Query: 216 GKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAI 275
GKTL+A+A A QT ATF+++ G + VQ +IG+GA+LVR+ FQLAKEK+P IIFIDE+DAI
Sbjct: 187 GKTLLAKAVANQTRATFIRVVGSEFVQKYIGEGARLVREVFQLAKEKAPSIIFIDELDAI 246
Query: 276 GTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRK 335
+R +S+ SGDREVQRTM++LL +LDGF +KVI ATNR DILDPA++R GR DR
Sbjct: 247 AARRTNSDTSGDREVQRTMMQLLAELDGFDPRGDVKVIGATNRIDILDPAILRPGRFDRI 306
Query: 336 IEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD 395
IE P PT E R +I +IH+RKM + DV+F+ELAR T+ +GA +KA+C EAGM A+R +
Sbjct: 307 IEVPLPTFEGRIQIFKIHTRKMKLAEDVDFKELARITEGASGADIKAICTEAGMFAIREE 366
Query: 396 ATEVNHEDFNEGIIQVQAK 414
+V DF + I +V K
Sbjct: 367 RAKVTMLDFTKAIEKVLKK 385
>sp|A6VHR1|PAN_METM7 Proteasome-activating nucleotidase OS=Methanococcus maripaludis
(strain C7 / ATCC BAA-1331) GN=pan PE=3 SV=1
Length = 407
Score = 336 bits (861), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 165/324 (50%), Positives = 230/324 (70%), Gaps = 4/324 (1%)
Query: 92 GANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSE 151
G +D ++RK V+K+ST + + VDP+ + PG V +N+ + I++ LP E
Sbjct: 73 GTILDKVNERKA---VVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKE 129
Query: 152 YDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYG 211
D R AME++EKP + DIGGL QI+++ E + LP+ + E F+K+G+ PPKGVLLYG
Sbjct: 130 KDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYG 189
Query: 212 PPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDE 271
PPGTGKTL+A+A A +TNA+F+++ G +LV+ FIG+GAKLVRD F+LAKEKSPCIIFIDE
Sbjct: 190 PPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDE 249
Query: 272 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGR 331
IDA+ +KR +S GDREVQRT+++LL ++DGF S +K+IAATNR DILDPA++R GR
Sbjct: 250 IDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGR 309
Query: 332 LDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLA 391
DR IE P E+ R IL+IH+ KMN+ +V+ E+A+ ++ GA LKAVC EAGM A
Sbjct: 310 FDRIIEISMPDEDGRLEILKIHTEKMNLK-NVDLREVAKLAENMVGADLKAVCTEAGMFA 368
Query: 392 LRRDATEVNHEDFNEGIIQVQAKK 415
+R + + +DF E I ++ KK
Sbjct: 369 IREEREFIKMDDFKEAISKITGKK 392
>sp|Q6LWR0|PAN_METMP Proteasome-activating nucleotidase OS=Methanococcus maripaludis
(strain S2 / LL) GN=pan PE=3 SV=1
Length = 407
Score = 335 bits (859), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 165/324 (50%), Positives = 229/324 (70%), Gaps = 4/324 (1%)
Query: 92 GANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSE 151
G +D ++RK V+K+ST + + VDP+ + PG V +N+ + I++ LP E
Sbjct: 73 GTILDKVNERKA---VVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKE 129
Query: 152 YDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYG 211
D R AME++EKP + DIGGL QI+++ E + LP+ + E F+K+G+ PPKGVLLYG
Sbjct: 130 KDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYG 189
Query: 212 PPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDE 271
PPGTGKTL+A+A A +TNA+F+++ G +LV+ FIG+GAKLVRD F+LAKEKSPCIIFIDE
Sbjct: 190 PPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDE 249
Query: 272 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGR 331
IDA+ +KR +S GDREVQRT+++LL ++DGF S +K+IAATNR DILDPA++R GR
Sbjct: 250 IDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGR 309
Query: 332 LDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLA 391
DR IE P E+ R IL+IH+ KMN+ V+ E+A+ ++ GA LKAVC EAGM A
Sbjct: 310 FDRIIEISMPDEDGRLEILKIHTEKMNLK-GVDLREVAKIAENMVGADLKAVCTEAGMFA 368
Query: 392 LRRDATEVNHEDFNEGIIQVQAKK 415
+R + + +DF E I ++ KK
Sbjct: 369 IREEREFIKMDDFREAISKITGKK 392
>sp|O26824|PAN_METTH Proteasome-activating nucleotidase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=pan PE=3 SV=1
Length = 410
Score = 335 bits (858), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 181/391 (46%), Positives = 252/391 (64%), Gaps = 13/391 (3%)
Query: 31 LDNEIRVLKEELQRTNLELDSFKEKIKENQ-----EKIKLNKQLPYLVGNIVEILEMNPE 85
L E+R+LKEE +T L K+++++ E+ +L++++ L G I E P
Sbjct: 15 LKKEVRMLKEENSKTKRNLMWKIRKLEKDKLLIENERTRLDREVKSLRGEI-ERFRTPPL 73
Query: 86 DEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLIL 145
A LD R V +K++T + +D +L+PG V +N+ ++ I+
Sbjct: 74 VIATVTEV---LDDHR----VAVKSTTGPHFVINYSRFIDRKQLEPGARVALNQQTFSIV 126
Query: 146 DTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPK 205
D LPSE D V MEV+EKP Y IGGLE+Q++E+ E + LP+ E F+K+G+ PPK
Sbjct: 127 DVLPSEKDPVVTGMEVEEKPDVSYEQIGGLEEQVREVKETVELPLKKPELFEKIGIEPPK 186
Query: 206 GVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPC 265
GVLLYGPPGTGKTL+A+A A +TNATF+K+ + V+ +IG+GA+LVR F+LAKEKSP
Sbjct: 187 GVLLYGPPGTGKTLLAKAVAHETNATFIKIVASEFVRKYIGEGARLVRGVFELAKEKSPS 246
Query: 266 IIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPA 325
IIFIDEIDA+ KR S SGDREVQRT+++LL +LDGF S + ++AATNR DILDPA
Sbjct: 247 IIFIDEIDAVAAKRLKSSTSGDREVQRTLMQLLAELDGFESRGNVGIVAATNRPDILDPA 306
Query: 326 LMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCV 385
L+R GR DR IE P P E+ R IL+IH+ M + +V+ E LAR TD +GA LKA+C
Sbjct: 307 LLRPGRFDRFIEVPLPNEDGRREILKIHTSGMALAEEVDIELLARITDGASGADLKAICT 366
Query: 386 EAGMLALRRDATEVNHEDFNEGIIQVQAKKK 416
EAGM A+R + EV DF + + ++ +K
Sbjct: 367 EAGMFAIRDERDEVTMADFMDAVDKIMGVEK 397
>sp|A9A916|PAN_METM6 Proteasome-activating nucleotidase OS=Methanococcus maripaludis
(strain C6 / ATCC BAA-1332) GN=pan PE=3 SV=1
Length = 407
Score = 334 bits (856), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 165/324 (50%), Positives = 229/324 (70%), Gaps = 4/324 (1%)
Query: 92 GANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSE 151
G +D ++RK V+K+ST + + VDP+ + PG V +N+ + I++ LP E
Sbjct: 73 GTILDRVNERKA---VVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKE 129
Query: 152 YDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYG 211
D R AME++EKP + DIGGL QI+++ E + LP+ + E F+K+G+ PPKGVLLYG
Sbjct: 130 KDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYG 189
Query: 212 PPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDE 271
PPGTGKTL+A+A A +TNA+F+++ G +LV+ FIG+GAKLVRD F+LAKEKSPCIIFIDE
Sbjct: 190 PPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDE 249
Query: 272 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGR 331
IDA+ +KR +S GDREVQRT+++LL ++DGF S +K+IAATNR DILDPA++R GR
Sbjct: 250 IDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGR 309
Query: 332 LDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLA 391
DR IE P E+ R IL+IH+ KMN+ V+ E+A+ ++ GA LKAVC EAGM A
Sbjct: 310 FDRIIEISMPDEDGRLDILKIHTEKMNLK-GVDLREVAKLAENMVGADLKAVCTEAGMFA 368
Query: 392 LRRDATEVNHEDFNEGIIQVQAKK 415
+R + + +DF E I ++ KK
Sbjct: 369 IREEREFIKMDDFKEAISKITGKK 392
>sp|A6UQT3|PAN_METVS Proteasome-activating nucleotidase OS=Methanococcus vannielii
(strain SB / ATCC 35089 / DSM 1224) GN=pan PE=3 SV=1
Length = 407
Score = 334 bits (856), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 179/411 (43%), Positives = 263/411 (63%), Gaps = 30/411 (7%)
Query: 13 DDQLSSMTADDIVRASRLLDNEIRVLKEELQ-----RTNLELDSFKEKIKENQEKIKLNK 67
D Q + M + + L + E +VL+ EL+ R N+++ E +K +K+++
Sbjct: 10 DVQKNEMDLKEFKEKAYLAELESKVLRLELKNKDITRENVQIKKENEILKRELDKLRIP- 68
Query: 68 QLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPD 127
P ++G + +D ++RK V+K+ST + + V+PD
Sbjct: 69 --PLILGTV------------------LDRVNERKA---VVKSSTGPNFLVNLSQFVEPD 105
Query: 128 KLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIV 187
+ PG V +N+ + +++ LP E D R AME++EKP + DIGGL QI+++ E +
Sbjct: 106 DIVPGARVCLNQQTLAVVEVLPKEKDYRAMAMELEEKPDILFGDIGGLNNQIRDIKEVVE 165
Query: 188 LPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGD 247
LP+ + E F+K+G+ PPKGVLLYGPPGTGKTL+A+A A +TNA+F+++ G +LV+ FIG+
Sbjct: 166 LPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVARETNASFVRVVGSELVKKFIGE 225
Query: 248 GAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSD 307
GAKLVRD F+LAKEKSPCIIFIDEIDA+ +KR +S GDREVQRT+++LL ++DGF S
Sbjct: 226 GAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSR 285
Query: 308 DRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEE 367
+K+IAATNR DILDPA++R GR DR IE P E+ R I +IH+ KMN+ V+ E
Sbjct: 286 GDVKIIAATNRPDILDPAILRPGRFDRIIEIAAPDEDGRLEIFKIHTDKMNIK-SVDLRE 344
Query: 368 LARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKAS 418
+A+ ++ GA +KAVC EAGM A+R V +DF E +++V KK+ S
Sbjct: 345 IAKMAENMVGADIKAVCTEAGMFAIREGREYVTTKDFKEALLKVTGKKEKS 395
>sp|O16368|PRS4_CAEEL Probable 26S protease regulatory subunit 4 OS=Caenorhabditis
elegans GN=rpt-2 PE=3 SV=1
Length = 443
Score = 332 bits (851), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 154/310 (49%), Positives = 225/310 (72%)
Query: 107 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 166
++ T+ ++ ++ VD ++L+PG V +N ++ ++ L + D V M++++ P
Sbjct: 125 IVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKAPQ 184
Query: 167 EDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAA 226
E Y D+GGL++QIQE+ EA+ LP+TH E ++++G+RPPKGV+LYG PGTGKTL+A+A A
Sbjct: 185 ETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAVAN 244
Query: 227 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSG 286
QT+ATFL++ G +L+Q ++GDG K+VR+ F++A+E +P I+FIDEIDA+GTKR+DS G
Sbjct: 245 QTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDSNSGG 304
Query: 287 DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 346
+RE+QRTMLELLNQLDGF S +KV+ ATNR + LDPAL+R GR+DRKIEFP P E+ +
Sbjct: 305 EREIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEKTK 364
Query: 347 ARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 406
RI QIH+ +M + +VN EE + D+ +GA +KA+C EAG+LALR V EDF +
Sbjct: 365 RRIFQIHTSRMTLGKEVNLEEFITAKDELSGADIKAMCTEAGLLALRERRMRVTMEDFQK 424
Query: 407 GIIQVQAKKK 416
V +KK
Sbjct: 425 SKENVLYRKK 434
>sp|P34123|PRS6B_DICDI 26S protease regulatory subunit 6B homolog OS=Dictyostelium
discoideum GN=psmC4 PE=1 SV=1
Length = 403
Score = 327 bits (838), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 159/400 (39%), Positives = 252/400 (63%), Gaps = 21/400 (5%)
Query: 23 DIVRASRLLDNEIRVLKEELQRTNLELDSFKEKIKENQEKIKLNKQLPYLVGNIVEILEM 82
D+ + + L++++ + + E + K ++ QE++K + +P L+G ++E+++
Sbjct: 24 DLYQKMKSLESKLDFFNIQEEYIKYEYKNLKRELLHAQEEVKRIRSVPLLIGQLLEMVDS 83
Query: 83 NPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSY 142
N ++++++ T+ + ++ +D + LKP V + + S
Sbjct: 84 N---------------------TGIVQSTSGSTLCVRILSTIDRELLKPSASVALQRHSN 122
Query: 143 LILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVR 202
++DTLP E DS + + DEKP+E Y+DIGG + Q QE+ EA+ LP+TH ++++G+
Sbjct: 123 ALVDTLPPESDSSIHLLGADEKPSESYSDIGGGDIQKQEMREAVELPLTHHNLYKQIGID 182
Query: 203 PPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEK 262
PP+GVLLYGPPGTGKT++A+A A T+A F+++ G + VQ ++G+G +LVRD F+LA+E
Sbjct: 183 PPRGVLLYGPPGTGKTMLAKAVAHHTSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLAREN 242
Query: 263 SPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADIL 322
SP IIFIDEIDAI TKRFD++ DREVQR ++ELLNQ+DGF +KVI ATNR D L
Sbjct: 243 SPAIIFIDEIDAIATKRFDAQTGADREVQRILMELLNQMDGFDVSVNVKVIMATNRQDTL 302
Query: 323 DPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKA 382
DPAL+R GRLDRKIEFP P + I Q+ + KMN+ +V+ E+ D +GA++++
Sbjct: 303 DPALLRPGRLDRKIEFPLPDRRQKRLIFQVITSKMNLSDEVDLEDYVSRPDKLSGAEIQS 362
Query: 383 VCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYY 422
+C EAGM A+R++ + +DF +G K N+Y
Sbjct: 363 ICQEAGMHAIRKNRYVILPKDFEKGYKASIKKNTHEFNFY 402
>sp|D4GUJ7|PAN1_HALVD Proteasome-activating nucleotidase 1 OS=Haloferax volcanii (strain
ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB
2012 / VKM B-1768 / DS2) GN=pan1 PE=2 SV=2
Length = 406
Score = 326 bits (836), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 180/415 (43%), Positives = 256/415 (61%), Gaps = 26/415 (6%)
Query: 1 MATAMVEDPNLEDDQLSSMTADDIVRASR---LLDNEIRVLKEELQRTNLELDSFKEKIK 57
M T V+D +L D+ S+ + I +L+ + ++++L TN E + +++K++
Sbjct: 1 MMTDTVDDVDLPYDKDSASQQEKITALQERLEVLETQNEEMRDKLLDTNAENNKYQQKLE 60
Query: 58 ENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIF 117
+ K KQ P V + EI + + V++K
Sbjct: 61 RLTHENKKLKQSPLFVATVQEITD----------------------EGVIIKQHGNNQEA 98
Query: 118 LPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEK 177
L V ++L+P V VN +S I+ L E D R + M+V+ P Y DIGGLE+
Sbjct: 99 LTEVTDEMREELEPDARVAVN-NSLSIVKRLDKETDVRARVMQVEHSPDVTYEDIGGLEE 157
Query: 178 QIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAG 237
Q+QE+ E + +P+ E F ++G+ PP GVLLYGPPGTGKT++A+A A QTNA+F+K+AG
Sbjct: 158 QMQEVRETVEMPLDRPEMFAEVGIDPPSGVLLYGPPGTGKTMLAKAVANQTNASFIKMAG 217
Query: 238 PQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLEL 297
+LV FIG+GAKLVRD F++A+E P +IFIDEIDAI +KR DS+ SGD EVQRTM++L
Sbjct: 218 SELVHKFIGEGAKLVRDLFEVARENEPAVIFIDEIDAIASKRTDSKTSGDAEVQRTMMQL 277
Query: 298 LNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKM 357
L ++DGF I++IAATNR D+LDPA++R GR DR IE P P E+ R I QIH+RKM
Sbjct: 278 LAEMDGFDERGNIRIIAATNRFDMLDPAILRPGRFDRLIEVPKPNEDGREIIFQIHTRKM 337
Query: 358 NVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQ 412
NV DV+F ELA D+ +GA +KAVC EAGM A+R D TE+ +DF + ++Q
Sbjct: 338 NVSDDVDFVELAEMADNASGADIKAVCTEAGMFAIRDDRTEIFMQDFVDAWEKIQ 392
>sp|Q5JHS5|PAN_PYRKO Proteasome-activating nucleotidase OS=Pyrococcus kodakaraensis
(strain ATCC BAA-918 / JCM 12380 / KOD1) GN=pan PE=3
SV=1
Length = 397
Score = 325 bits (833), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 175/385 (45%), Positives = 244/385 (63%), Gaps = 28/385 (7%)
Query: 36 RVLKEELQRTNLELDSFKEKIKENQEKIKLN----KQLPYLVGNIVEILEMNPEDEAEED 91
R+ + ELQ LE D KE+++ ++++ +Q P GN++E+
Sbjct: 23 RIRQLELQVRTLEAD--KERLERELSRLRMEMSRLRQPPAFAGNVIEV------------ 68
Query: 92 GANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSE 151
LD +R +++ + + ++ DKLKPG V +++ + I++ LPSE
Sbjct: 69 -----LDDER----AIVQNYNGPRFVVRIAPWIERDKLKPGARVALDQRTMAIVELLPSE 119
Query: 152 YDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYG 211
D V EV E+P YNDIGGLEKQ+QEL EAI LP+ H E F+++G+ PPKGVLLYG
Sbjct: 120 KDPSVLGFEVIERPKVTYNDIGGLEKQLQELREAIELPLKHPELFEQVGIEPPKGVLLYG 179
Query: 212 PPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDE 271
PPG GKTLMA+A A NATF+++ G +LV+ FIG+GA+LV + F+LAKEK+P IIFIDE
Sbjct: 180 PPGCGKTLMAKAVANHVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPTIIFIDE 239
Query: 272 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGR 331
IDAIG KR D G+REV RT+++LL ++DGF +KVIAATNR DILDPAL+R GR
Sbjct: 240 IDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGR 299
Query: 332 LDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLA 391
DR IE P P + R IL++H+RKMN+ V+ +A T+ +GA LKA+ EAGM A
Sbjct: 300 FDRLIEVPLPDYQGRLEILKVHTRKMNLK-GVDLRVIAEITEGASGADLKAIATEAGMFA 358
Query: 392 LRRDATEVNHEDFNEGIIQVQAKKK 416
+R T V +DF + + +V +K
Sbjct: 359 IRDRRTYVTQDDFLKAVDKVIGSEK 383
>sp|Q8SQK0|PRS8_ENCCU 26S protease regulatory subunit 8 homolog OS=Encephalitozoon
cuniculi (strain GB-M1) GN=RPT6 PE=1 SV=1
Length = 453
Score = 324 bits (831), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 174/362 (48%), Positives = 238/362 (65%), Gaps = 11/362 (3%)
Query: 60 QEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKC-VVLKTSTRQTIFL 118
Q++ +LN+++ +L I + +E +N+ + ++ GK V++KT+ +
Sbjct: 94 QKRAELNRRVRFLREEISIV---------QEPSSNVGVVVEKMGKMQVLVKTNPDGKYLV 144
Query: 119 PVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQ 178
V V+ D+LK G V + DSY + LP++ D V M V++ P Y IGGL++Q
Sbjct: 145 KVEPGVNYDELKAGVRVALRSDSYDVHRILPTKVDPLVSLMMVEKVPDSTYQMIGGLDEQ 204
Query: 179 IQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGP 238
I+E+ E I LP+ H E F+ LG+ PKGVLLYGPPGTGKTL+ARA A T F++++G
Sbjct: 205 IKEIREVIELPIKHPELFENLGIAQPKGVLLYGPPGTGKTLLARAVAHHTQCKFIRVSGS 264
Query: 239 QLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELL 298
+LVQ +IG+G++LVR+ F +A+E +P IIF+DEID+IG+ R DS D EVQRTMLELL
Sbjct: 265 ELVQKYIGEGSRLVRELFIMAREHAPSIIFMDEIDSIGSTRGDSNKGSDSEVQRTMLELL 324
Query: 299 NQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMN 358
NQLDGF S + IKVI ATNR DILDPAL+R+GR+DRKIEFP P E AR IL+IHSRKMN
Sbjct: 325 NQLDGFESHNNIKVIMATNRIDILDPALLRTGRIDRKIEFPPPNESARLEILKIHSRKMN 384
Query: 359 VHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKAS 418
+ ++ E +A +GA++KAVC EAGM ALR V EDF + +V KK
Sbjct: 385 LTKGIDLETIASKMVGCSGAEVKAVCTEAGMYALRERRVHVTQEDFEMAVHKV-LKKTGD 443
Query: 419 LN 420
LN
Sbjct: 444 LN 445
>sp|P40327|PRS4_YEAST 26S protease regulatory subunit 4 homolog OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RPT2 PE=1
SV=3
Length = 437
Score = 323 bits (827), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 153/309 (49%), Positives = 218/309 (70%)
Query: 107 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 166
++ + T ++ ++ VD + L+PG V ++ + I+ L + D V M++D+ PT
Sbjct: 119 IVTSPTMPDYYVSILSFVDKELLEPGCSVLLHHKTMSIVGVLQDDADPMVSVMKMDKSPT 178
Query: 167 EDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAA 226
E Y+DIGGLE QIQE+ E++ LP+TH E ++++G++PPKGV+LYG PGTGKTL+A+A A
Sbjct: 179 ESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVAN 238
Query: 227 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSG 286
QT+ATFL++ G +L+Q ++GDG +L R F++A E +P I+FIDEIDAIGTKR+DS G
Sbjct: 239 QTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRYDSNSGG 298
Query: 287 DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 346
+RE+QRTMLELLNQLDGF +KVI ATN+ + LDPAL+R GR+DRKI F +P +
Sbjct: 299 EREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDLSTK 358
Query: 347 ARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 406
+IL IH+ KMN+ DVN E L + DD +GA ++A+C EAG+LALR +V EDF +
Sbjct: 359 KKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQVTAEDFKQ 418
Query: 407 GIIQVQAKK 415
+V K
Sbjct: 419 AKERVMKNK 427
>sp|B8GGN4|PAN_METPE Proteasome-activating nucleotidase OS=Methanosphaerula palustris
(strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=pan PE=3
SV=1
Length = 412
Score = 323 bits (827), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 167/380 (43%), Positives = 242/380 (63%), Gaps = 28/380 (7%)
Query: 29 RLLDNEIRVLKEELQRTNLELDSFKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEA 88
R ++ + R L+ + R E+ FK +I++ K P ++G + ++++ N
Sbjct: 40 RQIEADKRYLETQKVRYEREVRKFKGEIEQM-------KSPPLVIGTVTDLIDENR---- 88
Query: 89 EEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTL 148
V++++S + + ++ +++KPG +N+ S I++ L
Sbjct: 89 -----------------VIVRSSAGPRFLVGISQSLNIEEIKPGARCTLNQQSLAIVEIL 131
Query: 149 PSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVL 208
P+ YD+++ MEV E P+E Y +IGGLEKQI E+ EA+ LP+ E F+K+G+ PPKGVL
Sbjct: 132 PTNYDAQIYGMEVIEAPSERYEEIGGLEKQINEIREAVELPLKKPEVFRKMGIEPPKGVL 191
Query: 209 LYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIF 268
L+GPPGTGKTL+ARA A QT A FL++ G +LVQ +IG+GA+LVR+ F+LAK+KSP IIF
Sbjct: 192 LHGPPGTGKTLLARAVAHQTEAHFLRVVGSELVQKYIGEGARLVRELFELAKKKSPSIIF 251
Query: 269 IDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMR 328
IDEIDAIG R +S SGDREV RT+++LL ++DGFS+ +++I ATNR DILD AL+R
Sbjct: 252 IDEIDAIGASRTESNTSGDREVHRTLMQLLAEMDGFSNRGDVRIIGATNRIDILDRALLR 311
Query: 329 SGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAG 388
GR DR IE P P E R IL IH MN+ V+ ++A TD NGA L+++C+EAG
Sbjct: 312 PGRFDRIIEIPAPDIEGRVSILNIHCAGMNIDKKVDIRDIATRTDGKNGADLRSICMEAG 371
Query: 389 MLALRRDATEVNHEDFNEGI 408
M A+R D V EDF + I
Sbjct: 372 MFAIRSDHEMVTLEDFEQSI 391
>sp|B6YXR2|PAN_THEON Proteasome-activating nucleotidase OS=Thermococcus onnurineus
(strain NA1) GN=pan PE=3 SV=1
Length = 398
Score = 322 bits (826), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 177/401 (44%), Positives = 258/401 (64%), Gaps = 30/401 (7%)
Query: 19 MTADDI-VRASRLLDNEIRVLKEELQRTNLE---LDSFKEKIKENQEKIKLN----KQLP 70
M+ +D+ ++ S D+ I LK+ +++ L+ L++ KE+++ ++++ +Q P
Sbjct: 1 MSIEDVGIKPSEEYDDYIMYLKKRIRQLELQVRTLEADKERLERELSRLRMEMSRLRQPP 60
Query: 71 YLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLK 130
G ++E+L+ ED A N G V++ + ++ + LK
Sbjct: 61 AFAGTLIELLD---EDRAIVQNYN--------GPRFVVR----------IAPWIERENLK 99
Query: 131 PGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPM 190
PG V +++ + I++ LPSE D V EV E+PT YNDIGGL+KQ+QEL EAI LP+
Sbjct: 100 PGARVALDQRTMAIVELLPSEKDPSVLGFEVIERPTVSYNDIGGLDKQLQELREAIELPL 159
Query: 191 THKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAK 250
H E F+K+G+ PPKGVLLYGPPG GKTLMA+A A + NATF+++ G +LV+ FIG+GA+
Sbjct: 160 KHPELFEKVGIEPPKGVLLYGPPGCGKTLMAKALAHEVNATFIRVVGSELVRKFIGEGAR 219
Query: 251 LVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRI 310
LV + F+LAKEK+P IIFIDEIDAIG KR D G+REV RT+++LL ++DGF +
Sbjct: 220 LVHELFELAKEKAPAIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPSGNV 279
Query: 311 KVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELAR 370
K+IAATNR DILDPAL+R GR DR IE P P ++R IL+IH+++MN+ V+ +A
Sbjct: 280 KIIAATNRPDILDPALLRPGRFDRLIEVPLPNFKSRLEILKIHTKRMNLK-GVDLRIIAE 338
Query: 371 STDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV 411
T+ +GA LKA+ +EAGM A+R V EDF + I +V
Sbjct: 339 MTEGASGADLKAITMEAGMFAIRDRREYVTQEDFLKAIEKV 379
>sp|Q94BQ2|PRS8B_ARATH 26S protease regulatory subunit 8 homolog B OS=Arabidopsis thaliana
GN=RPT6B PE=2 SV=1
Length = 419
Score = 322 bits (824), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 155/292 (53%), Positives = 212/292 (72%), Gaps = 1/292 (0%)
Query: 124 VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELV 183
+D KL P V + DSY++ LPS+ D V M+V++ P Y+ IGGL++QI+E+
Sbjct: 115 IDITKLTPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIK 174
Query: 184 EAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM 243
E I LP+ H E F+ LG+ PKGVLLYGPPGTGKTL+ARA A T+ TF++++G +LVQ
Sbjct: 175 EVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK 234
Query: 244 FIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDS-EVSGDREVQRTMLELLNQLD 302
+IG+G+++VR+ F +A+E +P IIF+DEID+IG+ R +S +GD EVQRTMLELLNQLD
Sbjct: 235 YIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLD 294
Query: 303 GFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPD 362
GF + ++IKV+ ATNR DILD AL+R GR+DRKIEFP+P EE+R IL+IHSRKMN+
Sbjct: 295 GFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRG 354
Query: 363 VNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAK 414
++ +++A + +GA+LKAVC EAGM ALR V EDF + +V K
Sbjct: 355 IDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKK 406
>sp|Q9C5U3|PRS8A_ARATH 26S protease regulatory subunit 8 homolog A OS=Arabidopsis thaliana
GN=RPT6A PE=2 SV=1
Length = 419
Score = 320 bits (821), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 154/292 (52%), Positives = 212/292 (72%), Gaps = 1/292 (0%)
Query: 124 VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELV 183
+D K+ P V + DSY++ LPS+ D V M+V++ P Y+ IGGL++QI+E+
Sbjct: 115 IDITKITPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIK 174
Query: 184 EAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM 243
E I LP+ H E F+ LG+ PKGVLLYGPPGTGKTL+ARA A T+ TF++++G +LVQ
Sbjct: 175 EVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK 234
Query: 244 FIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDS-EVSGDREVQRTMLELLNQLD 302
+IG+G+++VR+ F +A+E +P IIF+DEID+IG+ R +S +GD EVQRTMLELLNQLD
Sbjct: 235 YIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLD 294
Query: 303 GFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPD 362
GF + ++IKV+ ATNR DILD AL+R GR+DRKIEFP+P EE+R IL+IHSRKMN+
Sbjct: 295 GFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRG 354
Query: 363 VNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAK 414
++ +++A + +GA+LKAVC EAGM ALR V EDF + +V K
Sbjct: 355 IDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKK 406
>sp|Q8PY58|PAN_METMA Proteasome-activating nucleotidase OS=Methanosarcina mazei (strain
ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM
88) GN=pan PE=3 SV=1
Length = 420
Score = 320 bits (819), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 156/360 (43%), Positives = 237/360 (65%), Gaps = 21/360 (5%)
Query: 52 FKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTS 111
++ +I++ Q ++ K P ++G +++++ K +++++S
Sbjct: 62 YEREIRKLQSELDRMKTSPLIIGTVIDVI---------------------KNDRIIVRSS 100
Query: 112 TRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYND 171
+ V +D KL PG V +N+ + I + +PS + V AMEV E DY+
Sbjct: 101 NGPQFLVNVSQYIDEKKLLPGAKVALNQHTLAIAEVIPSTEEPFVAAMEVIESVEVDYDQ 160
Query: 172 IGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNAT 231
IGGL++QIQEL EA+ LP+T ERF ++G+ PPKGVLLYG PGTGKTL+A+A A +TNAT
Sbjct: 161 IGGLDEQIQELQEAVELPLTSPERFARIGIEPPKGVLLYGLPGTGKTLLAKAVAHRTNAT 220
Query: 232 FLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQ 291
F+++ G +LVQ +IGDG+KLVR+ F++A++K+P IIFIDE+D+I +R + DREVQ
Sbjct: 221 FIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETTGADREVQ 280
Query: 292 RTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQ 351
RT+++LL ++DGF I++IAATNR D+LDPA++R GR DR + P P EAR +IL+
Sbjct: 281 RTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILK 340
Query: 352 IHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV 411
IH KM + D++F++LA++T+ +GA LKA+ EAGM A+RRD V E+F E + +V
Sbjct: 341 IHCEKMTLAEDIDFKKLAKATEGMSGADLKAIATEAGMFAVRRDKELVEMEEFLEAVEKV 400
>sp|A7I8B8|PAN_METB6 Proteasome-activating nucleotidase OS=Methanoregula boonei (strain
6A8) GN=pan PE=3 SV=1
Length = 436
Score = 318 bits (816), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 159/358 (44%), Positives = 233/358 (65%), Gaps = 24/358 (6%)
Query: 55 KIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQ 114
K+K E+++ P ++G +V++++ N V++++S
Sbjct: 87 KLKSESEQLR---SPPLIIGTVVDVVDANR---------------------VIVRSSAGP 122
Query: 115 TIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGG 174
+ V+PD +KPG +N+ S I++ LPS +D++V ME+ + P E Y DIGG
Sbjct: 123 RFLVRSSPSVNPDDIKPGARCTLNQQSLAIVELLPSSFDAQVYGMELVDSPQECYTDIGG 182
Query: 175 LEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLK 234
L++QI E+ EA+ LP+ E F ++G+ PPKGVLLYGPPGTGKTL+A+A A +TNA F++
Sbjct: 183 LKEQINEVREAVELPLKRPELFTQIGIEPPKGVLLYGPPGTGKTLLAKAVAHETNAHFMR 242
Query: 235 LAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTM 294
+ G +LVQ +IG+GA+LVR+ F LAK+K+P IIFIDEIDA+G R ++ SGDREVQRT+
Sbjct: 243 VVGSELVQKYIGEGARLVRELFDLAKKKAPTIIFIDEIDAVGASRTEANTSGDREVQRTL 302
Query: 295 LELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHS 354
++LL +DGF + +K+I ATNR DILD AL+R GR DR IE P P EE R IL++H+
Sbjct: 303 MQLLAGMDGFETRGDVKIIGATNRIDILDKALLRPGRFDRIIEIPLPDEEGRLSILKVHT 362
Query: 355 RKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQ 412
R + + VN E+A T+ NGA L+A+C+EAGM A+R + + EDF I +V+
Sbjct: 363 RTLTMEETVNLPEIAGLTEGKNGADLRAICMEAGMYAIRNERPAITREDFLSAIEKVR 420
>sp|P85200|PRS6B_HELAN 26S protease regulatory subunit 6B homolog OS=Helianthus annuus
PE=1 SV=1
Length = 414
Score = 318 bits (816), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 161/415 (38%), Positives = 254/415 (61%), Gaps = 22/415 (5%)
Query: 8 DPNLEDDQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFKEKIKENQEKIKLNK 67
+P D Q S+ + DD+ + LD +I + + + EL + K + +QE++K +
Sbjct: 21 NPYTTDSQ-STDSEDDLYTRLKTLDRQIEFIDIQEEYVKDELKNLKREQLRSQEEVKRIQ 79
Query: 68 QLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPD 127
+P ++G +E+++ N +G ++ ++T ++ ++ ++ +
Sbjct: 80 SVPLVIGQFMEMIDQN-------NG--------------IVGSTTGSNYYVRILSTINRE 118
Query: 128 KLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIV 187
LKP V +++ S ++D LP E DS + + EKP YNDIGG + Q QE+ EA+
Sbjct: 119 LLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVE 178
Query: 188 LPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGD 247
LP+TH E ++++G+ PP+GVLLYGPPGTGKT++A+A A T A F+++ G + VQ ++G+
Sbjct: 179 LPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGE 238
Query: 248 GAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSD 307
G ++VRD F+LAKE +P IIFIDE+DAI T RFD++ DREVQR ++ELLNQ+DGF
Sbjct: 239 GPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQT 298
Query: 308 DRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEE 367
+KVI ATNRAD LDPAL+R GRLDRKIEFP P + + Q+ + KMN+ +V+ E+
Sbjct: 299 VNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLED 358
Query: 368 LARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYY 422
D + A++ A+C EAGM A+R++ + +DF +G K ++Y
Sbjct: 359 YVSRPDKISAAEITAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFDFY 413
>sp|P36612|PRS4_SCHPO 26S protease regulatory subunit 4 homolog OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mts2 PE=2 SV=1
Length = 448
Score = 318 bits (815), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 154/291 (52%), Positives = 211/291 (72%), Gaps = 1/291 (0%)
Query: 117 FLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLE 176
++ ++ VD D L+PG V ++ + I+ L + D + M++D+ PTE Y DIGGLE
Sbjct: 138 YVSIMSFVDKDMLEPGCSVLLHHKAMSIVGLLLDDTDPMINVMKLDKAPTESYADIGGLE 197
Query: 177 KQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLA 236
QIQE+ EA+ LP+TH E ++++G++PPKGV+LYG PGTGKTL+A+A A QT+ATFL++
Sbjct: 198 SQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVV 257
Query: 237 GPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLE 296
G +L+Q ++GDG +LVR F A+E SP I+FIDEIDAIGTKR+D++ +RE+QRTMLE
Sbjct: 258 GSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKRYDAQSGAEREIQRTMLE 317
Query: 297 LLNQLDGFSSDDR-IKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSR 355
LLNQLDGF + R IKVI ATNR LDPAL+R GR+DRKI F +P E + +I IH+
Sbjct: 318 LLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKILFENPDEATKRKIFTIHTS 377
Query: 356 KMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 406
KMN+ DVN EEL + DD +GA++KA+ EAG+LALR V +DF +
Sbjct: 378 KMNLGEDVNLEELIQCKDDLSGAEIKAIVSEAGLLALRERRMRVVMDDFRQ 428
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.135 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 156,279,063
Number of Sequences: 539616
Number of extensions: 6877342
Number of successful extensions: 36426
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1594
Number of HSP's successfully gapped in prelim test: 1224
Number of HSP's that attempted gapping in prelim test: 32528
Number of HSP's gapped (non-prelim): 3798
length of query: 423
length of database: 191,569,459
effective HSP length: 120
effective length of query: 303
effective length of database: 126,815,539
effective search space: 38425108317
effective search space used: 38425108317
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)