BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014526
(423 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FN48|CAS_ARATH Calcium sensing receptor, chloroplastic OS=Arabidopsis thaliana
GN=CAS PE=1 SV=1
Length = 387
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 94/189 (49%), Gaps = 14/189 (7%)
Query: 222 QQVSVAIEGLE--RSLGFDPNDPIVPFVVFLGTSATLWIFYWW--------WTYGGYSGD 271
QQ S AIE + S D P V+ + A + + + GY GD
Sbjct: 161 QQTSKAIEDAKPIASSTMDTISSADPSVIVVAAGAAFLAYLLLPPVFSAISFNFRGYKGD 220
Query: 272 LSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLR 331
L+P TL+LL K N +++D+R E +E+ GIP L A+ R S+ L E+ VK ++R
Sbjct: 221 LTPAQTLDLLCTK-NYLMVDIRSEKDKEKAGIPRLPSNAKNRVISIPLEELPNKVKGIVR 279
Query: 332 GGRELDDTLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGF-- 389
+ ++ + A I LK + S +I++D+ +K +A++L+ LG ++V GF
Sbjct: 280 NSKRVEAEIAALKISYLKKINKGSNIIILDSYTDSAKIVAKTLKVLGYKNCYIVTDGFSG 339
Query: 390 -QSWVKEGL 397
+ W++ L
Sbjct: 340 GRGWLQSRL 348
>sp|Q9CL12|GLPE_PASMU Thiosulfate sulfurtransferase GlpE OS=Pasteurella multocida (strain
Pm70) GN=glpE PE=3 SV=1
Length = 107
Score = 37.7 bits (86), Expect = 0.15, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 30/51 (58%)
Query: 352 QDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKEL 402
+D VIV+ G S+G A L + G + + V GGF++W ++GL I+ +
Sbjct: 56 EDDHPVIVICYHGVSSRGAAMYLIEQGYTQVYSVTGGFEAWERDGLPIERI 106
>sp|B3GZR9|GLPE_ACTP7 Thiosulfate sulfurtransferase GlpE OS=Actinobacillus
pleuropneumoniae serotype 7 (strain AP76) GN=glpE PE=3
SV=1
Length = 108
Score = 35.8 bits (81), Expect = 0.59, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 28/55 (50%)
Query: 346 RNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIK 400
R L V VIVM G S+ A+ L + G R + V+GGF W + GL I+
Sbjct: 51 RFLDEVDYEEPVIVMCYHGVSSRNTAQFLVEQGFDRVYSVKGGFDGWERSGLPIE 105
>sp|Q6T893|GLPE_ACTPL Thiosulfate sulfurtransferase GlpE OS=Actinobacillus
pleuropneumoniae GN=glpE PE=3 SV=1
Length = 108
Score = 35.8 bits (81), Expect = 0.70, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 28/55 (50%)
Query: 346 RNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIK 400
R L V VIVM G S+ A+ L + G R + V+GGF W + GL I+
Sbjct: 51 RFLDEVDYEEPVIVMCYHGVSSRNTAQFLVEQGFDRVYSVKGGFDGWERSGLPIE 105
>sp|A3MYF1|GLPE_ACTP2 Thiosulfate sulfurtransferase GlpE OS=Actinobacillus
pleuropneumoniae serotype 5b (strain L20) GN=glpE PE=3
SV=1
Length = 108
Score = 35.8 bits (81), Expect = 0.70, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 28/55 (50%)
Query: 346 RNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIK 400
R L V VIVM G S+ A+ L + G R + V+GGF W + GL I+
Sbjct: 51 RFLDEVDYEEPVIVMCYHGVSSRNTAQFLVEQGFDRVYSVKGGFDGWERSGLPIE 105
>sp|Q7VNZ0|GLPE_HAEDU Thiosulfate sulfurtransferase GlpE OS=Haemophilus ducreyi (strain
35000HP / ATCC 700724) GN=glpE PE=3 SV=1
Length = 110
Score = 35.4 bits (80), Expect = 0.83, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 348 LKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKE 401
L +V D VIV+ G S+ +A+ L + G + V GGF++W K L + +
Sbjct: 53 LDLVSDEQAVIVVCYHGISSRSVAQFLVEQGFETVYSVTGGFEAWQKLALPVTK 106
>sp|B1LJR7|PYRD_ECOSM Dihydroorotate dehydrogenase (quinone) OS=Escherichia coli (strain
SMS-3-5 / SECEC) GN=pyrD PE=3 SV=1
Length = 336
Score = 35.4 bits (80), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 54/107 (50%), Gaps = 15/107 (14%)
Query: 100 VKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSKLTNFSTDL-----KEA 154
V+ ++D + ++ T++ +S + + N DQTGG +G L ST++ +E
Sbjct: 235 VRHNIDGVIATNTTLDRSLVQGMKNC--------DQTGGLSGRPLQLKSTEIIRRLSQEL 286
Query: 155 SSKATVAAVDVLRNTIVALEESMTNGASFVVYYYGTTKESLPPEIRD 201
+ + + V + ++++A E + GAS V Y G + PP I++
Sbjct: 287 NGRLPIIGVGGI-DSVIAAREKIAAGASLVQIYSGFIFKG-PPLIKE 331
>sp|B7N3A7|PYRD_ECOLU Dihydroorotate dehydrogenase (quinone) OS=Escherichia coli
O17:K52:H18 (strain UMN026 / ExPEC) GN=pyrD PE=3 SV=1
Length = 336
Score = 35.4 bits (80), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 54/107 (50%), Gaps = 15/107 (14%)
Query: 100 VKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSKLTNFSTDL-----KEA 154
V+ ++D + ++ T++ +S + + N DQTGG +G L ST++ +E
Sbjct: 235 VRHNIDGVIATNTTLDRSLVQGMKNC--------DQTGGLSGRPLQLKSTEIIRRLSQEL 286
Query: 155 SSKATVAAVDVLRNTIVALEESMTNGASFVVYYYGTTKESLPPEIRD 201
+ + + V + ++++A E + GAS V Y G + PP I++
Sbjct: 287 NGRLPIIGVGGI-DSVIAAREKIAAGASLVQIYSGFIFKG-PPLIKE 331
>sp|B7NM29|PYRD_ECO7I Dihydroorotate dehydrogenase (quinone) OS=Escherichia coli O7:K1
(strain IAI39 / ExPEC) GN=pyrD PE=3 SV=1
Length = 336
Score = 35.4 bits (80), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 54/107 (50%), Gaps = 15/107 (14%)
Query: 100 VKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSKLTNFSTDL-----KEA 154
V+ ++D + ++ T++ +S + + N DQTGG +G L ST++ +E
Sbjct: 235 VRHNIDGVIATNTTLDRSLVQGMKNC--------DQTGGLSGRPLQLKSTEIIRRLSQEL 286
Query: 155 SSKATVAAVDVLRNTIVALEESMTNGASFVVYYYGTTKESLPPEIRD 201
+ + + V + ++++A E + GAS V Y G + PP I++
Sbjct: 287 NGRLPIIGVGGI-DSVIAAREKIAAGASLVQIYSGFIFKG-PPLIKE 331
>sp|Q1RDR9|PYRD_ECOUT Dihydroorotate dehydrogenase (quinone) OS=Escherichia coli (strain
UTI89 / UPEC) GN=pyrD PE=3 SV=2
Length = 336
Score = 35.4 bits (80), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 54/107 (50%), Gaps = 15/107 (14%)
Query: 100 VKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSKLTNFSTDL-----KEA 154
V+ ++D + ++ T++ +S + + N DQTGG +G L ST++ +E
Sbjct: 235 VRHNIDGVIATNTTLDRSLVQGMKNC--------DQTGGLSGRPLQLKSTEIIRRLSQEL 286
Query: 155 SSKATVAAVDVLRNTIVALEESMTNGASFVVYYYGTTKESLPPEIRD 201
+ + + V + ++++A E + GAS V Y G + PP I++
Sbjct: 287 NGRLPIIGVGGI-DSVIAAREKIAAGASLVQIYSGFIFKG-PPLIKE 331
>sp|Q8FJ91|PYRD_ECOL6 Dihydroorotate dehydrogenase (quinone) OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=pyrD PE=3 SV=2
Length = 336
Score = 35.4 bits (80), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 54/107 (50%), Gaps = 15/107 (14%)
Query: 100 VKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSKLTNFSTDL-----KEA 154
V+ ++D + ++ T++ +S + + N DQTGG +G L ST++ +E
Sbjct: 235 VRHNIDGVIATNTTLDRSLVQGMKNC--------DQTGGLSGRPLQLKSTEIIRRLSQEL 286
Query: 155 SSKATVAAVDVLRNTIVALEESMTNGASFVVYYYGTTKESLPPEIRD 201
+ + + V + ++++A E + GAS V Y G + PP I++
Sbjct: 287 NGRLPIIGVGGI-DSVIAAREKIAAGASLVQIYSGFIFKG-PPLIKE 331
>sp|Q0TJB6|PYRD_ECOL5 Dihydroorotate dehydrogenase (quinone) OS=Escherichia coli
O6:K15:H31 (strain 536 / UPEC) GN=pyrD PE=3 SV=1
Length = 336
Score = 35.4 bits (80), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 54/107 (50%), Gaps = 15/107 (14%)
Query: 100 VKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSKLTNFSTDL-----KEA 154
V+ ++D + ++ T++ +S + + N DQTGG +G L ST++ +E
Sbjct: 235 VRHNIDGVIATNTTLDRSLVQGMKNC--------DQTGGLSGRPLQLKSTEIIRRLSQEL 286
Query: 155 SSKATVAAVDVLRNTIVALEESMTNGASFVVYYYGTTKESLPPEIRD 201
+ + + V + ++++A E + GAS V Y G + PP I++
Sbjct: 287 NGRLPIIGVGGI-DSVIAAREKIAAGASLVQIYSGFIFKG-PPLIKE 331
>sp|A1A9L5|PYRD_ECOK1 Dihydroorotate dehydrogenase (quinone) OS=Escherichia coli O1:K1 /
APEC GN=pyrD PE=3 SV=1
Length = 336
Score = 35.4 bits (80), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 54/107 (50%), Gaps = 15/107 (14%)
Query: 100 VKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSKLTNFSTDL-----KEA 154
V+ ++D + ++ T++ +S + + N DQTGG +G L ST++ +E
Sbjct: 235 VRHNIDGVIATNTTLDRSLVQGMKNC--------DQTGGLSGRPLQLKSTEIIRRLSQEL 286
Query: 155 SSKATVAAVDVLRNTIVALEESMTNGASFVVYYYGTTKESLPPEIRD 201
+ + + V + ++++A E + GAS V Y G + PP I++
Sbjct: 287 NGRLPIIGVGGI-DSVIAAREKIAAGASLVQIYSGFIFKG-PPLIKE 331
>sp|B7MS56|PYRD_ECO81 Dihydroorotate dehydrogenase (quinone) OS=Escherichia coli O81
(strain ED1a) GN=pyrD PE=3 SV=1
Length = 336
Score = 35.4 bits (80), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 54/107 (50%), Gaps = 15/107 (14%)
Query: 100 VKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSKLTNFSTDL-----KEA 154
V+ ++D + ++ T++ +S + + N DQTGG +G L ST++ +E
Sbjct: 235 VRHNIDGVIATNTTLDRSLVQGMKNC--------DQTGGLSGRPLQLKSTEIIRRLSQEL 286
Query: 155 SSKATVAAVDVLRNTIVALEESMTNGASFVVYYYGTTKESLPPEIRD 201
+ + + V + ++++A E + GAS V Y G + PP I++
Sbjct: 287 NGRLPIIGVGGI-DSVIAAREKIAAGASLVQIYSGFIFKG-PPLIKE 331
>sp|B7MHP7|PYRD_ECO45 Dihydroorotate dehydrogenase (quinone) OS=Escherichia coli O45:K1
(strain S88 / ExPEC) GN=pyrD PE=3 SV=1
Length = 336
Score = 35.4 bits (80), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 54/107 (50%), Gaps = 15/107 (14%)
Query: 100 VKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSKLTNFSTDL-----KEA 154
V+ ++D + ++ T++ +S + + N DQTGG +G L ST++ +E
Sbjct: 235 VRHNIDGVIATNTTLDRSLVQGMKNC--------DQTGGLSGRPLQLKSTEIIRRLSQEL 286
Query: 155 SSKATVAAVDVLRNTIVALEESMTNGASFVVYYYGTTKESLPPEIRD 201
+ + + V + ++++A E + GAS V Y G + PP I++
Sbjct: 287 NGRLPIIGVGGI-DSVIAAREKIAAGASLVQIYSGFIFKG-PPLIKE 331
>sp|B7UN24|PYRD_ECO27 Dihydroorotate dehydrogenase (quinone) OS=Escherichia coli O127:H6
(strain E2348/69 / EPEC) GN=pyrD PE=3 SV=1
Length = 336
Score = 35.4 bits (80), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 54/107 (50%), Gaps = 15/107 (14%)
Query: 100 VKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSKLTNFSTDL-----KEA 154
V+ ++D + ++ T++ +S + + N DQTGG +G L ST++ +E
Sbjct: 235 VRHNIDGVIATNTTLDRSLVQGMKNC--------DQTGGLSGRPLQLKSTEIIRRLSQEL 286
Query: 155 SSKATVAAVDVLRNTIVALEESMTNGASFVVYYYGTTKESLPPEIRD 201
+ + + V + ++++A E + GAS V Y G + PP I++
Sbjct: 287 NGRLPIIGVGGI-DSVIAAREKIAAGASLVQIYSGFIFKG-PPLIKE 331
>sp|Q2NQH2|GLPE_SODGM Thiosulfate sulfurtransferase GlpE OS=Sodalis glossinidius (strain
morsitans) GN=glpE PE=3 SV=1
Length = 107
Score = 35.0 bits (79), Expect = 1.1, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 7/67 (10%)
Query: 330 LRGGREL-DDTLTAAVIRNLKIVQDRSK-VIVMDADGTRSKGIARSLRKLGVMRAFLVQG 387
LRG L +DTL A + ++ D ++ V+V+ G SKG A+ L GV A+ V G
Sbjct: 37 LRGAFHLTNDTLPAFLAQH-----DLARPVMVLCYHGNSSKGAAQYLLTQGVEVAYSVDG 91
Query: 388 GFQSWVK 394
GF +W+K
Sbjct: 92 GFDAWLK 98
>sp|Q8XA45|MLTF_ECO57 Membrane-bound lytic murein transglycosylase F OS=Escherichia coli
O157:H7 GN=mltF PE=3 SV=2
Length = 518
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 16/85 (18%)
Query: 5 GSGELKYIEDSSVPAVEEGLVDF--ADRMTENADKLMAPVEPKTTLAIELTPENPTTTFD 62
GS EL +ED V EG +D+ AD + A L V P+ +A+++T E P T F
Sbjct: 184 GSAEL--MED-----VIEGKLDYTIADSV---AISLFQRVHPELAVALDITDEQPVTWFS 233
Query: 63 SLDMDNSSISNIKSSFDDFLAGVNE 87
LD DN+ + ++ DF +NE
Sbjct: 234 PLDGDNT----LSAALLDFFNEMNE 254
>sp|P0AGC6|MLTF_SHIFL Membrane-bound lytic murein transglycosylase F OS=Shigella flexneri
GN=mltF PE=3 SV=2
Length = 518
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 16/85 (18%)
Query: 5 GSGELKYIEDSSVPAVEEGLVDF--ADRMTENADKLMAPVEPKTTLAIELTPENPTTTFD 62
GS EL +ED V EG +D+ AD + A L V P+ +A+++T E P T F
Sbjct: 184 GSAEL--MED-----VIEGKLDYTIADSV---AISLFQRVHPELAVALDITDEQPVTWFS 233
Query: 63 SLDMDNSSISNIKSSFDDFLAGVNE 87
LD DN+ + ++ DF +NE
Sbjct: 234 PLDGDNT----LSAALLDFFNEMNE 254
>sp|P0AGC5|MLTF_ECOLI Membrane-bound lytic murein transglycosylase F OS=Escherichia coli
(strain K12) GN=mltF PE=1 SV=2
Length = 518
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 16/85 (18%)
Query: 5 GSGELKYIEDSSVPAVEEGLVDF--ADRMTENADKLMAPVEPKTTLAIELTPENPTTTFD 62
GS EL +ED V EG +D+ AD + A L V P+ +A+++T E P T F
Sbjct: 184 GSAEL--MED-----VIEGKLDYTIADSV---AISLFQRVHPELAVALDITDEQPVTWFS 233
Query: 63 SLDMDNSSISNIKSSFDDFLAGVNE 87
LD DN+ + ++ DF +NE
Sbjct: 234 PLDGDNT----LSAALLDFFNEMNE 254
>sp|B1IVR9|MLTF_ECOLC Membrane-bound lytic murein transglycosylase F OS=Escherichia coli
(strain ATCC 8739 / DSM 1576 / Crooks) GN=mltF PE=3 SV=1
Length = 518
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 16/85 (18%)
Query: 5 GSGELKYIEDSSVPAVEEGLVDF--ADRMTENADKLMAPVEPKTTLAIELTPENPTTTFD 62
GS EL +ED V EG +D+ AD + A L V P+ +A+++T E P T F
Sbjct: 184 GSAEL--MED-----VIEGKLDYTIADSV---AISLFQRVHPELAVALDITDEQPVTWFS 233
Query: 63 SLDMDNSSISNIKSSFDDFLAGVNE 87
LD DN+ + ++ DF +NE
Sbjct: 234 PLDGDNT----LSAALLDFFNEMNE 254
>sp|A8A366|MLTF_ECOHS Membrane-bound lytic murein transglycosylase F OS=Escherichia coli
O9:H4 (strain HS) GN=mltF PE=3 SV=1
Length = 518
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 16/85 (18%)
Query: 5 GSGELKYIEDSSVPAVEEGLVDF--ADRMTENADKLMAPVEPKTTLAIELTPENPTTTFD 62
GS EL +ED V EG +D+ AD + A L V P+ +A+++T E P T F
Sbjct: 184 GSAEL--MED-----VIEGKLDYTIADSV---AISLFQRVHPELAVALDITDEQPVTWFS 233
Query: 63 SLDMDNSSISNIKSSFDDFLAGVNE 87
LD DN+ + ++ DF +NE
Sbjct: 234 PLDGDNT----LSAALLDFFNEMNE 254
>sp|B1XB33|MLTF_ECODH Membrane-bound lytic murein transglycosylase F OS=Escherichia coli
(strain K12 / DH10B) GN=mltF PE=3 SV=2
Length = 518
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 16/85 (18%)
Query: 5 GSGELKYIEDSSVPAVEEGLVDF--ADRMTENADKLMAPVEPKTTLAIELTPENPTTTFD 62
GS EL +ED V EG +D+ AD + A L V P+ +A+++T E P T F
Sbjct: 184 GSAEL--MED-----VIEGKLDYTIADSV---AISLFQRVHPELAVALDITDEQPVTWFS 233
Query: 63 SLDMDNSSISNIKSSFDDFLAGVNE 87
LD DN+ + ++ DF +NE
Sbjct: 234 PLDGDNT----LSAALLDFFNEMNE 254
>sp|B3Y154|MLTF_ECO11 Membrane-bound lytic murein transglycosylase F OS=Escherichia coli
O111:H- GN=mltF PE=3 SV=1
Length = 518
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 16/85 (18%)
Query: 5 GSGELKYIEDSSVPAVEEGLVDF--ADRMTENADKLMAPVEPKTTLAIELTPENPTTTFD 62
GS EL +ED V EG +D+ AD + A L V P+ +A+++T E P T F
Sbjct: 184 GSAEL--MED-----VIEGKLDYTIADSV---AISLFQRVHPELAVALDITDEQPVTWFS 233
Query: 63 SLDMDNSSISNIKSSFDDFLAGVNE 87
LD DN+ + ++ DF +NE
Sbjct: 234 PLDGDNT----LSAALLDFFNEMNE 254
>sp|Q0T1W2|MLTF_SHIF8 Membrane-bound lytic murein transglycosylase F OS=Shigella flexneri
serotype 5b (strain 8401) GN=mltF PE=3 SV=2
Length = 518
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 16/85 (18%)
Query: 5 GSGELKYIEDSSVPAVEEGLVDF--ADRMTENADKLMAPVEPKTTLAIELTPENPTTTFD 62
GS EL +ED V EG +D+ AD + A L V P+ +A+++T E P T F
Sbjct: 184 GSAEL--MED-----VIEGKLDYTIADSV---AISLFQRVHPELAVALDITDEQPVTWFS 233
Query: 63 SLDMDNSSISNIKSSFDDFLAGVNE 87
LD DN+ + ++ DF +NE
Sbjct: 234 PLDGDNT----LSAALLDFFNEMNE 254
>sp|B1LP71|MLTF_ECOSM Membrane-bound lytic murein transglycosylase F OS=Escherichia coli
(strain SMS-3-5 / SECEC) GN=mltF PE=3 SV=1
Length = 518
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 16/85 (18%)
Query: 5 GSGELKYIEDSSVPAVEEGLVDF--ADRMTENADKLMAPVEPKTTLAIELTPENPTTTFD 62
GS EL +ED V EG +D+ AD + A L V P+ +A+++T E P T F
Sbjct: 184 GSAEL--MED-----VIEGKLDYTIADSV---AISLFQRVHPELAVALDITDEQPVTWFS 233
Query: 63 SLDMDNSSISNIKSSFDDFLAGVNE 87
LD DN+ + ++ DF +NE
Sbjct: 234 PLDGDNT----LSAALLDFFNEMNE 254
>sp|Q3YYZ7|MLTF_SHISS Membrane-bound lytic murein transglycosylase F OS=Shigella sonnei
(strain Ss046) GN=mltF PE=3 SV=2
Length = 518
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 16/85 (18%)
Query: 5 GSGELKYIEDSSVPAVEEGLVDF--ADRMTENADKLMAPVEPKTTLAIELTPENPTTTFD 62
GS EL +ED V EG +D+ AD + A L V P+ +A+++T E P T F
Sbjct: 184 GSAEL--MED-----VIEGKLDYTIADSV---AISLFQRVHPELAVALDITDEQPVTWFS 233
Query: 63 SLDMDNSSISNIKSSFDDFLAGVNE 87
LD DN+ + ++ DF +NE
Sbjct: 234 PLDGDNT----LSAALLDFFNEMNE 254
>sp|Q31XS9|MLTF_SHIBS Membrane-bound lytic murein transglycosylase F OS=Shigella boydii
serotype 4 (strain Sb227) GN=mltF PE=3 SV=2
Length = 518
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 16/85 (18%)
Query: 5 GSGELKYIEDSSVPAVEEGLVDF--ADRMTENADKLMAPVEPKTTLAIELTPENPTTTFD 62
GS EL +ED V EG +D+ AD + A L V P+ +A+++T E P T F
Sbjct: 184 GSAEL--MED-----VIEGKLDYTIADSV---AISLFQRVHPELAVALDITDEQPVTWFS 233
Query: 63 SLDMDNSSISNIKSSFDDFLAGVNE 87
LD DN+ + ++ DF +NE
Sbjct: 234 PLDGDNT----LSAALLDFFNEMNE 254
>sp|B2TXX1|MLTF_SHIB3 Membrane-bound lytic murein transglycosylase F OS=Shigella boydii
serotype 18 (strain CDC 3083-94 / BS512) GN=mltF PE=3
SV=1
Length = 518
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 16/85 (18%)
Query: 5 GSGELKYIEDSSVPAVEEGLVDF--ADRMTENADKLMAPVEPKTTLAIELTPENPTTTFD 62
GS EL +ED V EG +D+ AD + A L V P+ +A+++T E P T F
Sbjct: 184 GSAEL--MED-----VIEGKLDYTIADSV---AISLFQRVHPELAVALDITDEQPVTWFS 233
Query: 63 SLDMDNSSISNIKSSFDDFLAGVNE 87
LD DN+ + ++ DF +NE
Sbjct: 234 PLDGDNT----LSAALLDFFNEMNE 254
>sp|Q8Z4L5|MLTF_SALTI Membrane-bound lytic murein transglycosylase F OS=Salmonella typhi
GN=mltF PE=3 SV=1
Length = 475
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 38 LMAPVEPKTTLAIELTPENPTTTFDSLDMDNSSISNIKSSFDDFLAGVNESFSSSMIK 95
L V P+ +A+++T E P T F LD DN+ + ++ DF +NE S + I+
Sbjct: 209 LFQRVHPELAVALDVTDEQPVTWFSRLDDDNT----LSAALLDFFNSINEDGSLARIE 262
>sp|Q1R8H6|MLTF_ECOUT Membrane-bound lytic murein transglycosylase F OS=Escherichia coli
(strain UTI89 / UPEC) GN=mltF PE=3 SV=1
Length = 518
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 16/85 (18%)
Query: 5 GSGELKYIEDSSVPAVEEGLVDF--ADRMTENADKLMAPVEPKTTLAIELTPENPTTTFD 62
GS EL +ED V EG +D+ AD + A L V P+ +A+++T E P T F
Sbjct: 184 GSAEL--MED-----VIEGKLDYTIADSV---AISLFQRVHPELAVALDITDEQPVTWFS 233
Query: 63 SLDMDNSSISNIKSSFDDFLAGVNE 87
LD DN+ + ++ DF +NE
Sbjct: 234 PLDGDNT----LSAALLDFFNEMNE 254
>sp|Q0TET0|MLTF_ECOL5 Membrane-bound lytic murein transglycosylase F OS=Escherichia coli
O6:K15:H31 (strain 536 / UPEC) GN=mltF PE=3 SV=1
Length = 518
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 16/85 (18%)
Query: 5 GSGELKYIEDSSVPAVEEGLVDF--ADRMTENADKLMAPVEPKTTLAIELTPENPTTTFD 62
GS EL +ED V EG +D+ AD + A L V P+ +A+++T E P T F
Sbjct: 184 GSAEL--MED-----VIEGKLDYTIADSV---AISLFQRVHPELAVALDITDEQPVTWFS 233
Query: 63 SLDMDNSSISNIKSSFDDFLAGVNE 87
LD DN+ + ++ DF +NE
Sbjct: 234 PLDGDNT----LSAALLDFFNEMNE 254
>sp|A1AE89|MLTF_ECOK1 Membrane-bound lytic murein transglycosylase F OS=Escherichia coli
O1:K1 / APEC GN=mltF PE=3 SV=2
Length = 518
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 16/85 (18%)
Query: 5 GSGELKYIEDSSVPAVEEGLVDF--ADRMTENADKLMAPVEPKTTLAIELTPENPTTTFD 62
GS EL +ED V EG +D+ AD + A L V P+ +A+++T E P T F
Sbjct: 184 GSAEL--MED-----VIEGKLDYTIADSV---AISLFQRVHPELAVALDITDEQPVTWFS 233
Query: 63 SLDMDNSSISNIKSSFDDFLAGVNE 87
LD DN+ + ++ DF +NE
Sbjct: 234 PLDGDNT----LSAALLDFFNEMNE 254
>sp|A7ZQ01|MLTF_ECO24 Membrane-bound lytic murein transglycosylase F OS=Escherichia coli
O139:H28 (strain E24377A / ETEC) GN=mltF PE=3 SV=2
Length = 518
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 16/85 (18%)
Query: 5 GSGELKYIEDSSVPAVEEGLVDF--ADRMTENADKLMAPVEPKTTLAIELTPENPTTTFD 62
GS EL +ED V EG +D+ AD + A L V P+ +A+++T E P T F
Sbjct: 184 GSAEL--MED-----VIEGKLDYTIADSV---AISLFQRVHPELAVALDITDEQPVTWFS 233
Query: 63 SLDMDNSSISNIKSSFDDFLAGVNE 87
LD DN+ + ++ DF +NE
Sbjct: 234 PLDGDNT----LSAALLDFFNEMNE 254
>sp|P0AG27|YIBN_ECOLI Uncharacterized protein YibN OS=Escherichia coli (strain K12)
GN=yibN PE=1 SV=1
Length = 143
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 27/117 (23%)
Query: 281 LRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTL 340
L KE+AV++D LR+RD D R+G + GS+ L +
Sbjct: 48 LINKEDAVVVD-----LRQRD---DFRKG-----------HIAGSINLL-------PSEI 81
Query: 341 TAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGL 397
A + L+ +D+ VIV+D G + + A +L K G + F+++ G W E L
Sbjct: 82 KANNVGELEKHKDKP-VIVVDGSGMQCQEPANALTKAGFAQVFVLKEGVAGWAGENL 137
>sp|P0AG28|YIBN_ECOL6 Uncharacterized protein YibN OS=Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC) GN=yibN PE=3 SV=1
Length = 143
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 27/117 (23%)
Query: 281 LRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTL 340
L KE+AV++D LR+RD D R+G + GS+ L +
Sbjct: 48 LINKEDAVVVD-----LRQRD---DFRKG-----------HIAGSINLL-------PSEI 81
Query: 341 TAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGL 397
A + L+ +D+ VIV+D G + + A +L K G + F+++ G W E L
Sbjct: 82 KANNVGELEKHKDKP-VIVVDGSGMQCQEPANALTKAGFAQVFVLKEGVAGWAGENL 137
>sp|P0AG29|YIBN_ECO57 Uncharacterized protein YibN OS=Escherichia coli O157:H7 GN=yibN
PE=3 SV=1
Length = 143
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 27/117 (23%)
Query: 281 LRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTL 340
L KE+AV++D LR+RD D R+G + GS+ L +
Sbjct: 48 LINKEDAVVVD-----LRQRD---DFRKG-----------HIAGSINLL-------PSEI 81
Query: 341 TAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGL 397
A + L+ +D+ VIV+D G + + A +L K G + F+++ G W E L
Sbjct: 82 KANNVGELEKHKDKP-VIVVDGSGMQCQEPANALTKAGFAQVFVLKEGVAGWAGENL 137
>sp|B7LNV5|PYRD_ESCF3 Dihydroorotate dehydrogenase (quinone) OS=Escherichia fergusonii
(strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=pyrD
PE=3 SV=1
Length = 336
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 54/107 (50%), Gaps = 15/107 (14%)
Query: 100 VKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSKLTNFSTDL-----KEA 154
V+ ++D + ++ T++ +S + + N DQTGG +G L ST++ +E
Sbjct: 235 VRHNIDGVIATNTTLDRSLVQGMKNC--------DQTGGLSGRPLQLKSTEIIRRLSQEL 286
Query: 155 SSKATVAAVDVLRNTIVALEESMTNGASFVVYYYGTTKESLPPEIRD 201
+ + + V + ++++A E + GA+ V Y G + PP I++
Sbjct: 287 NGRLPIIGVGGI-DSVIAAREKIAAGATLVQIYSGFIFKG-PPLIKE 331
>sp|B6ENU6|GLPE_ALISL Thiosulfate sulfurtransferase GlpE OS=Aliivibrio salmonicida
(strain LFI1238) GN=glpE PE=3 SV=1
Length = 107
Score = 34.3 bits (77), Expect = 1.8, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 351 VQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKE 401
V+ V+VM G S+G A+ L G + V GGF+ W K GL +++
Sbjct: 57 VEFEQPVLVMCYHGHSSQGAAQYLINQGYEEVYSVDGGFEGWNKAGLPVEK 107
>sp|Q32D14|MLTF_SHIDS Membrane-bound lytic murein transglycosylase F OS=Shigella
dysenteriae serotype 1 (strain Sd197) GN=mltF PE=3 SV=2
Length = 518
Score = 34.3 bits (77), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 16/85 (18%)
Query: 5 GSGELKYIEDSSVPAVEEGLVDF--ADRMTENADKLMAPVEPKTTLAIELTPENPTTTFD 62
GS EL +ED V EG +D+ AD + A L V P+ +A+++T E P T F
Sbjct: 184 GSAEL--MED-----VIEGKLDYTIADSV---AISLFQRVHPELAVALDITDEQPVTWFR 233
Query: 63 SLDMDNSSISNIKSSFDDFLAGVNE 87
LD DN+ + ++ DF +NE
Sbjct: 234 PLDGDNT----LSAALLDFFNEMNE 254
>sp|A9MGY7|MLTF_SALAR Membrane-bound lytic murein transglycosylase F OS=Salmonella
arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
GN=mltF PE=3 SV=1
Length = 514
Score = 34.3 bits (77), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 38 LMAPVEPKTTLAIELTPENPTTTFDSLDMDNSSISNIKSSFDDFLAGVNESFSSSMIK 95
L V P+ +A+++T E P T F LD DN+ + ++ DF +NE S + I+
Sbjct: 209 LFQRVHPELAVALDVTDEQPVTWFSRLDDDNT----LSAALLDFFNSINEDGSLARIE 262
>sp|A8AID4|PYRD_CITK8 Dihydroorotate dehydrogenase (quinone) OS=Citrobacter koseri
(strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=pyrD
PE=3 SV=1
Length = 336
Score = 34.3 bits (77), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 20/98 (20%)
Query: 100 VKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSKLT--------NFSTDL 151
V+ ++D + ++ T++ +S + + N D+TGG +G L S +L
Sbjct: 235 VRHNIDGVIATNTTLDRSLVQGMKNC--------DETGGLSGRPLQLKSTEIIRRLSQEL 286
Query: 152 KEASSKATVAAVDVLRNTIVALEESMTNGASFVVYYYG 189
KE V +D +++A E M GA+ V Y G
Sbjct: 287 KEQLPIIGVGGID----SVIAAREKMAAGATLVQIYSG 320
>sp|Q8ZN28|MLTF_SALTY Membrane-bound lytic murein transglycosylase F OS=Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
GN=mltF PE=3 SV=1
Length = 514
Score = 33.9 bits (76), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 38 LMAPVEPKTTLAIELTPENPTTTFDSLDMDNSSISNIKSSFDDFLAGVNESFSSSMIK 95
L V P+ +A+++T E P T F LD DN+ + ++ DF +NE S + I+
Sbjct: 209 LFQRVHPELAVALDVTDEQPVTWFSRLDDDNT----LSAALLDFFNSINEDGSLARIE 262
>sp|A9N1U5|MLTF_SALPB Membrane-bound lytic murein transglycosylase F OS=Salmonella
paratyphi B (strain ATCC BAA-1250 / SPB7) GN=mltF PE=3
SV=1
Length = 514
Score = 33.9 bits (76), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 38 LMAPVEPKTTLAIELTPENPTTTFDSLDMDNSSISNIKSSFDDFLAGVNESFSSSMIK 95
L V P+ +A+++T E P T F LD DN+ + ++ DF +NE S + I+
Sbjct: 209 LFQRVHPELAVALDVTDEQPVTWFSRLDDDNT----LSAALLDFFNSINEDGSLARIE 262
>sp|B5FCB8|GLPE_VIBFM Thiosulfate sulfurtransferase GlpE OS=Vibrio fischeri (strain MJ11)
GN=glpE PE=3 SV=1
Length = 107
Score = 33.9 bits (76), Expect = 2.2, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 357 VIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKE 401
V+VM G S+G A+ L G + V GGF+ W K GL +++
Sbjct: 63 VLVMCYHGHSSQGAAQYLVNQGYEEVYSVDGGFEGWHKAGLPVEK 107
>sp|Q5E203|GLPE_VIBF1 Thiosulfate sulfurtransferase GlpE OS=Vibrio fischeri (strain ATCC
700601 / ES114) GN=glpE PE=3 SV=1
Length = 107
Score = 33.9 bits (76), Expect = 2.2, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 357 VIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKE 401
V+VM G S+G A+ L G + V GGF+ W K GL +++
Sbjct: 63 VLVMCYHGHSSQGAAQYLVNQGYEEVYSVDGGFEGWHKAGLPVEK 107
>sp|Q57LE4|MLTF_SALCH Membrane-bound lytic murein transglycosylase F OS=Salmonella
choleraesuis (strain SC-B67) GN=mltF PE=3 SV=1
Length = 514
Score = 33.9 bits (76), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 38 LMAPVEPKTTLAIELTPENPTTTFDSLDMDNSSISNIKSSFDDFLAGVNESFSSSMIK 95
L V P+ +A+++T E P T F LD DN+ + ++ DF +NE S + I+
Sbjct: 209 LFQRVHPELAVALDVTDEQPVTWFSRLDDDNT----LSAALLDFFNSINEDGSLARIE 262
>sp|B0BRY5|GLPE_ACTPJ Thiosulfate sulfurtransferase GlpE OS=Actinobacillus
pleuropneumoniae serotype 3 (strain JL03) GN=glpE PE=3
SV=1
Length = 108
Score = 33.9 bits (76), Expect = 2.3, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 28/55 (50%)
Query: 346 RNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIK 400
R L V VIV+ G S+ A+ L + G R + V+GGF W + GL I+
Sbjct: 51 RFLDEVDYEEPVIVICYHGVSSRNTAQFLVEQGFDRVYSVKGGFDGWERSGLPIE 105
>sp|A6TCH2|MLTF_KLEP7 Membrane-bound lytic murein transglycosylase F OS=Klebsiella
pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH
78578) GN=mltF PE=3 SV=2
Length = 511
Score = 33.9 bits (76), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 9/71 (12%)
Query: 19 AVEEGLVDF--ADRMTENADKLMAPVEPKTTLAIELTPENPTTTFDSLDMDNSSISNIKS 76
AV +G +D+ AD + A L V P+ +A+++T E P T F + D DNS + +
Sbjct: 191 AVIDGKLDYTIADSV---AVSLFQRVHPELAVALDITDEQPVTWFSARDDDNS----LSA 243
Query: 77 SFDDFLAGVNE 87
+ DF +NE
Sbjct: 244 AMLDFFNNINE 254
>sp|C4L7X3|GLPE_TOLAT Thiosulfate sulfurtransferase GlpE OS=Tolumonas auensis (strain DSM
9187 / TA4) GN=glpE PE=3 SV=1
Length = 106
Score = 33.9 bits (76), Expect = 2.5, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 351 VQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSW 392
+ + V+VM G S+G+A L +G + + + GGF+ W
Sbjct: 55 ITKETPVLVMCYHGNSSQGVANYLTSIGYEKVYSIDGGFEGW 96
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.131 0.366
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 148,557,024
Number of Sequences: 539616
Number of extensions: 6094393
Number of successful extensions: 18249
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 160
Number of HSP's that attempted gapping in prelim test: 17574
Number of HSP's gapped (non-prelim): 570
length of query: 423
length of database: 191,569,459
effective HSP length: 120
effective length of query: 303
effective length of database: 126,815,539
effective search space: 38425108317
effective search space used: 38425108317
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)